BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009256
(539 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224142159|ref|XP_002324426.1| predicted protein [Populus trichocarpa]
gi|222865860|gb|EEF02991.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/533 (85%), Positives = 497/533 (93%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA++TLINPPVNALAIPI+AGLK+KF+EAT R+DVKA+VLTG GGR
Sbjct: 1 MAKPHVTMEVGNDGVAVVTLINPPVNALAIPIIAGLKEKFDEATRRNDVKALVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH GD+SLMPDVSVELVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHATGDISLMPDVSVELVVNTIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL+GLSKAIE+MLLSK I SEEG KLGLI
Sbjct: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLLGLSKAIEIMLLSKPIMSEEGKKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V S+ELLKVSR WALDI+ RRKPW+RSLHRTDK+GSLSEAREVLK AR QAKK APN
Sbjct: 181 DAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLSEAREVLKAARQQAKKIAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQHQA LDV+EEGI+HGGY+GVLKEAKVFKELV+ +TS+GLVHVFFAQR TSK+P VTD
Sbjct: 241 VPQHQALLDVMEEGIIHGGYNGVLKEAKVFKELVLTETSKGLVHVFFAQRMTSKIPKVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GLKPR ++KVAVIGGGLMGSGIATA I++NI+VVLKE+NSEYL KG KTIEANVR LVT
Sbjct: 301 VGLKPRHIKKVAVIGGGLMGSGIATALIVSNIHVVLKEINSEYLQKGTKTIEANVRSLVT 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKLT+DKA+ AL MLKG LDYS+FKDVDMVIEAVIESVPLKQKIFSE+EK CPPHCILA
Sbjct: 361 RGKLTRDKADKALSMLKGALDYSDFKDVDMVIEAVIESVPLKQKIFSEIEKICPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN+VGEKTSSQDRIIGAHFFSPAH+MPLLEIVRTE+TSAQ ILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHIMPLLEIVRTEKTSAQAILDLMTVGKTIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KVPVVVGNCTGFAVNRAFFPY+QSA +LV LGVDVFRID I SFGLP+GP+Q
Sbjct: 481 KVPVVVGNCTGFAVNRAFFPYTQSALILVHLGVDVFRIDKLISSFGLPMGPYQ 533
>gi|225445200|ref|XP_002284283.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1 [Vitis vinifera]
gi|297738804|emb|CBI28049.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/533 (80%), Positives = 487/533 (91%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ VTMEVGNDGVA+IT+ NPPVNALA+ I+AGLK+K+ EA R+DVKAIV+TG GGR
Sbjct: 1 MSKAEVTMEVGNDGVAVITMSNPPVNALALAIIAGLKEKYAEAMRRNDVKAIVVTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH D+S +PD S++L+VN +ED KKP VAAVEGLALGGGLE+AM C
Sbjct: 61 FSGGFDINVFQKVHKTADISHLPDASIDLLVNTVEDAKKPSVAAVEGLALGGGLEVAMAC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIAAPKTQLGLPEL+LGV+PGFGGTQRLPRLVGLSKAIEMM LSKSI+SEEG+KLGL+
Sbjct: 121 HARIAAPKTQLGLPELSLGVMPGFGGTQRLPRLVGLSKAIEMMRLSKSISSEEGYKLGLV 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V+SEELLKVSR WALDI +RKPW+RSLH+T+KLGS+SEA ++LK++R QA+KT P+
Sbjct: 181 DAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVSEALDILKISRQQARKTVPH 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQHQACLDVIEEGIVHGGYSG+LKE KVF +LV+ DT++GL+HVFFAQRATSKVPNVTD
Sbjct: 241 LPQHQACLDVIEEGIVHGGYSGLLKETKVFNKLVLSDTAKGLIHVFFAQRATSKVPNVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR V+KVAVIGGGLMGSGIATA I +NIYVVLKEVNSEYLLKGIKTIEANVRGLVT
Sbjct: 301 IGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKLTQDKA AL MLKGVLDYSEFKD+DMVIEAVIE++ LKQKIFSE+EK C PHCILA
Sbjct: 361 KGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENISLKQKIFSEIEKICSPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPLLE+VRTE+TSAQVILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRTEKTSAQVILDLMTVGKAIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PVVVG+CTGFAVNR FFPY+Q A LV+LGVD FRID I +FGLP+GPFQ
Sbjct: 481 KIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWVISNFGLPMGPFQ 533
>gi|315419009|gb|ADU15551.1| MFP [Gossypium hirsutum]
Length = 721
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/534 (82%), Positives = 489/534 (91%), Gaps = 1/534 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +VTMEVGNDGVA+IT+ NPPVNALAIPI+ GLK+KF EAT RDDVKAIVLTG GGR
Sbjct: 1 MSQSKVTMEVGNDGVAVITISNPPVNALAIPIIDGLKEKFAEATRRDDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF KVHG GDVS+MPDVSV+LV N +EDCKKPIVAAVEGLALGGGLE AMGC
Sbjct: 61 FSGGFDINVFTKVHGTGDVSIMPDVSVDLVTNAVEDCKKPIVAAVEGLALGGGLEFAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIAAP+TQLGLPEL+LGVIPGFGGTQRLPRLVGLSKAIEMML SK I SEEG KLGLI
Sbjct: 121 HARIAAPRTQLGLPELSLGVIPGFGGTQRLPRLVGLSKAIEMMLSSKPIMSEEGKKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V S+ELLKVS WALD+A RRKPW+RSLHRTDK+GSLSEAREVL++ARLQAKKTAPN
Sbjct: 181 DALVPSKELLKVSCAWALDMAERRKPWLRSLHRTDKIGSLSEAREVLRMARLQAKKTAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQHQ CLDVIEEGIVHGGYSGVLKEAKVFKE+V+ DTSRGLVHVF AQRATSKVPNVTD
Sbjct: 241 LPQHQVCLDVIEEGIVHGGYSGVLKEAKVFKEIVLSDTSRGLVHVFLAQRATSKVPNVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GLKPR V+KVA+IGGGLMGSGIATA I+NNI+VVLKEVNSEYLLKGIKT+EANVRGL
Sbjct: 301 VGLKPRQVKKVAIIGGGLMGSGIATALIVNNIFVVLKEVNSEYLLKGIKTVEANVRGLAN 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGK+T+DKA AL MLKGVLDYSEFKDVDMVIEAV+E+V LKQKIFSE+EKACPPHCILA
Sbjct: 361 RGKMTKDKAEKALSMLKGVLDYSEFKDVDMVIEAVVENVALKQKIFSEIEKACPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN++GEK +SQDR++GAHFFSPAH+MPLLE VRT++ S Q+ILDLMTVGK+IK
Sbjct: 421 TNTSTIDLNLIGEKMNSQDRLVGAHFFSPAHLMPLLETVRTQKASPQIILDLMTVGKVIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAIRSFGLPIGPFQ 533
KVPVVVGNCTGFAVNR FFPY+Q LLVSLGV D +RID I +FG P+GPFQ
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYTQGPHLLVSLGVDDAYRIDRVICNFGFPLGPFQ 534
>gi|406365505|gb|AFS41246.1| cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida]
Length = 724
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/533 (81%), Positives = 481/533 (90%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA +VTMEVG DGVA+IT+ NPPVNALAIPI+ LK+K+ EAT R+DVKAIVLTGNGGR
Sbjct: 1 MAQVKVTMEVGTDGVAVITIFNPPVNALAIPIINALKEKWTEATIRNDVKAIVLTGNGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVHG GD+S MPDVSV+LVVN +EDCKKP VAA+EGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHGTGDISQMPDVSVDLVVNTMEDCKKPAVAAIEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIAAP+ QLGLPEL+LGV+PGFGGTQRLPRL+GLSKA+EMM+ SK I SEEG KLGLI
Sbjct: 121 HARIAAPRAQLGLPELSLGVMPGFGGTQRLPRLIGLSKAVEMMMTSKPIMSEEGKKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V S ELLKVSR WALDIA RRKPW+RSLH+TDK+GSLSEAREVLK+AR Q K+TA N
Sbjct: 181 DAIVPSSELLKVSRQWALDIAERRKPWMRSLHKTDKIGSLSEAREVLKVARQQVKQTAKN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
MPQH AC+DVIEEGI+HGGY+GVLKEAKVFK+LV+ +TS+GLVHVFFAQRATSKVPNVTD
Sbjct: 241 MPQHVACIDVIEEGIIHGGYAGVLKEAKVFKDLVLSETSKGLVHVFFAQRATSKVPNVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR V+KVAVIGGGLMGSGIATA L+N +VVLKE+NSEYL KG+K IEANVRGLV
Sbjct: 301 IGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINSEYLQKGMKAIEANVRGLVA 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
R KL QDKA+ AL M+KG LDYS+FKDVDMVIEAVIESVPLKQKIFSE+EK CPPHCILA
Sbjct: 361 RKKLPQDKADKALSMVKGALDYSDFKDVDMVIEAVIESVPLKQKIFSEIEKVCPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDLNI+GE T S+DRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDLM VGK IK
Sbjct: 421 SNTSTIDLNIIGENTRSKDRIIGAHFFSPAHIMPLLEIVRTEKTSTQAILDLMAVGKAIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KVPVVVGNCTGFAVNR FFPYSQ A +LV+LGVD +RID+ I SFGLP+GP Q
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYSQGAHILVNLGVDAYRIDAQITSFGLPMGPLQ 533
>gi|449443155|ref|XP_004139346.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 724
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/533 (78%), Positives = 471/533 (88%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+IT+ NPPVNALA + LK KFEEA R+DVKA+VLTG GGR
Sbjct: 1 MAEPSVTMEVGNDGVALITMSNPPVNALARSMFPALKSKFEEAMRRNDVKAVVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF+ +H GD SL+PDVSV++ VN +ED KKPIVAA+EGLALGGGLE+A+
Sbjct: 61 FSGGFDINVFEMIHKTGDTSLLPDVSVDIAVNTMEDAKKPIVAAIEGLALGGGLEMALAS 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIA PK QLGLPEL+LGVIPGFGGTQRLPRL+GL KAIEMMLLSK+ITSEEG KLGLI
Sbjct: 121 HARIAVPKVQLGLPELSLGVIPGFGGTQRLPRLIGLPKAIEMMLLSKTITSEEGEKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV+ EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+EAR VLK AR QAKK APN
Sbjct: 181 DAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLAEARSVLKSAREQAKKIAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
PQ AC+DVIE+GI+HGGYSGVLKE KVF+ELV DT++GLVHVFF+QR SKVPNVTD
Sbjct: 241 TPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKGLVHVFFSQRLISKVPNVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N EYL KGIKTIEAN+RGLV
Sbjct: 301 RGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINPEYLQKGIKTIEANLRGLVV 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPLKQKIFSE+EK CP HCILA
Sbjct: 361 KGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPLKQKIFSEIEKICPAHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRTE+TS QVILDLMTVGKIIK
Sbjct: 421 TNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRTEKTSPQVILDLMTVGKIIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID I +FGLP+GPFQ
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRVITNFGLPLGPFQ 533
>gi|255546439|ref|XP_002514279.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223546735|gb|EEF48233.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 724
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/533 (80%), Positives = 480/533 (90%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+I++ NPPVNALA+PI+ GLK+KF EA R DV+AIVLTG GR
Sbjct: 1 MAKPHVTMEVGNDGVAVISMSNPPVNALAVPIIMGLKEKFTEAARRKDVQAIVLTGKNGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S++PDVSV+LVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDASILPDVSVDLVVNAIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI APKTQLGLPEL+LG+IPGFGGTQRLPRLVGL KAI+MML SK I SEEG KLGL+
Sbjct: 121 HARIVAPKTQLGLPELSLGIIPGFGGTQRLPRLVGLPKAIQMMLTSKPIMSEEGKKLGLV 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D +V+S+ELLKVSR WALDI RRKPW+RSLH TDKLGSLSEA E+LK AR QAKKTAPN
Sbjct: 181 DVIVSSQELLKVSRQWALDIKERRKPWMRSLHMTDKLGSLSEALELLKAARQQAKKTAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
MPQHQACLDVIE+G+VHGGYSGVLKEAKVFKELV+ DT++ L+HVFFAQR TSKVPNV+D
Sbjct: 241 MPQHQACLDVIEDGVVHGGYSGVLKEAKVFKELVISDTAKSLIHVFFAQRTTSKVPNVSD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR ++KVAVIGGGLMGSGI TA I + IYVVLKE+NSEYLLKGIK +EANVRGLVT
Sbjct: 301 IGLKPRQIKKVAVIGGGLMGSGIITALITSGIYVVLKEINSEYLLKGIKMVEANVRGLVT 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKL+ DKA+ AL MLKGVLDYS+F+DVDMVIEAVIES+PLKQKIFSE+EKACPPHCILA
Sbjct: 361 RGKLSPDKADKALSMLKGVLDYSDFRDVDMVIEAVIESIPLKQKIFSEIEKACPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN+VG+KTS+QD IIGAHFFSPAH+MPLLEIVRT++TS Q ILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGKKTSAQDCIIGAHFFSPAHIMPLLEIVRTDKTSPQAILDLMTVGKSIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KV VVVGNCTGFAVNR FFPY+Q A LLV+LGVDVFRID I +FGLP+GP Q
Sbjct: 481 KVSVVVGNCTGFAVNRTFFPYAQGAHLLVNLGVDVFRIDRVICNFGLPMGPLQ 533
>gi|449515444|ref|XP_004164759.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 719
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/533 (78%), Positives = 466/533 (87%), Gaps = 5/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+IT+ NPPVNALA + LK KFEEA R+DVKA+VLTG GGR
Sbjct: 1 MAEPSVTMEVGNDGVALITMSNPPVNALARSMFPALKSKFEEAMRRNDVKAVVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF+ +H GD SL+PDVSV++ VN +ED KKPIVAA+EGLALGGGLE+A+
Sbjct: 61 FSGGFDINVFEMIHKTGDTSLLPDVSVDIAVNTMEDAKKPIVAAIEGLALGGGLEMALAS 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIA PK QLGLPEL+LGVIPGFGGTQRLPRL+GL KAIEMMLLSK+ITSEEG KLGLI
Sbjct: 121 HARIAVPKVQLGLPELSLGVIPGFGGTQRLPRLIGLPKAIEMMLLSKTITSEEGEKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV+ EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+EAR VLK AR QAKK APN
Sbjct: 181 DAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLAEARSVLKSAREQAKKIAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
PQ AC+DVIE+GI+HGGYSGVLKE KVF+ELV DT++GLVHVFF VPNVTD
Sbjct: 241 TPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKGLVHVFFPS-----VPNVTD 295
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N EYL KGIKTIEAN+RGLV
Sbjct: 296 RGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINPEYLQKGIKTIEANLRGLVV 355
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPLKQKIFSE+EK CP HCILA
Sbjct: 356 KGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPLKQKIFSEIEKICPAHCILA 415
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRTE+TS QVILDLMTVGKIIK
Sbjct: 416 TNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRTEKTSPQVILDLMTVGKIIK 475
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID I +FGLP+GPFQ
Sbjct: 476 KVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRVITNFGLPLGPFQ 528
>gi|356520511|ref|XP_003528905.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/533 (79%), Positives = 476/533 (89%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P+V EVG DGVA+IT+ NPPVNALAIPI+ GLK++F+EA R+DVKAIVLTG GGR
Sbjct: 1 MALPKVDFEVGTDGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S +PDVSVELVVN IED KKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDSSHLPDVSVELVVNSIEDSKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR+AAP+ QLGLPELTLG+IPGFGGTQRLPRL+GLSKA+EMML SK ITSEEG K GLI
Sbjct: 121 HARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKFGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V+SEELLK SRLWAL+I RRKPWIRSLHRTDK+GSLSEAR VLK AR Q KKTAP+
Sbjct: 181 DAIVSSEELLKASRLWALEIGERRKPWIRSLHRTDKIGSLSEARAVLKTARQQVKKTAPH 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQ QAC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DTS+GL++VFFAQRA SKVP VTD
Sbjct: 241 LPQQQACVDVIEHGIVHGGYSGVLKEAEVFKQLVISDTSKGLINVFFAQRAISKVPGVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR V+K AVIGGGLMGSGIATA IL NI V+LKE+NSE+LLKGIKTIEANV GLV
Sbjct: 301 IGLKPRNVKKAAVIGGGLMGSGIATALILGNIRVILKEINSEFLLKGIKTIEANVNGLVR 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKLT+ KA+ AL +LKGVLDYSEFKDVD+VIEAVIE++ LKQ IF +LEK CPPHCILA
Sbjct: 361 RGKLTKQKADAALSLLKGVLDYSEFKDVDLVIEAVIENISLKQTIFGDLEKICPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDL++VG+ TSSQDRI GAHFFSPAH+MPLLEI+RT++TSAQVI+DL+TVGKIIK
Sbjct: 421 SNTSTIDLDVVGKTTSSQDRIAGAHFFSPAHIMPLLEIIRTDKTSAQVIVDLITVGKIIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID I +FG PIGPFQ
Sbjct: 481 KAPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDRLICNFGFPIGPFQ 533
>gi|357500631|ref|XP_003620604.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
gi|355495619|gb|AES76822.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
Length = 722
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/533 (78%), Positives = 472/533 (88%), Gaps = 2/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA+ +V EVGNDGVA+IT+ NPPVNALAIPI+ GLK+KFEEA R+DVKAIVLTG GGR
Sbjct: 1 MASVKVDFEVGNDGVAVITMCNPPVNALAIPIIRGLKNKFEEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD++L+PDVSVELVVN IED KKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDITLVPDVSVELVVNSIEDSKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR+AAPK QLGLPELTLG+IPGFGGTQRLPRLVG SKA+EMML SK IT+EEG KLGLI
Sbjct: 121 HARVAAPKAQLGLPELTLGIIPGFGGTQRLPRLVGTSKAVEMMLTSKPITAEEGQKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V+ ELLK+SR WAL+IA +R+PWIRSLH TDKLGS +AREVL+ AR KKTAP+
Sbjct: 181 DAIVSPAELLKLSRQWALEIAEQRRPWIRSLHITDKLGS--DAREVLRTARQHVKKTAPH 238
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQ QAC+DVIE GI+HGGYSGVL+EA+VFK+LV+ +T++GL+HVFFAQR SK+P VTD
Sbjct: 239 LPQQQACIDVIEHGILHGGYSGVLREAEVFKKLVLSETAKGLIHVFFAQRTISKIPGVTD 298
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR VRK AVIGGGLMGSGIATA IL NI V+LKEVNSEYL KGIKTIEANVRGLVT
Sbjct: 299 IGLKPRNVRKAAVIGGGLMGSGIATALILGNIRVILKEVNSEYLQKGIKTIEANVRGLVT 358
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
R KLTQ KA AL +LKGVLDY+EFKDVDMVIEAVIE V LKQ IFS+LEK CPPHCILA
Sbjct: 359 RKKLTQQKAEGALSLLKGVLDYAEFKDVDMVIEAVIEKVSLKQDIFSDLEKICPPHCILA 418
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDLNI+GEK SSQDR+IGAHFFSPAH+MPLLEIVRT +TSAQVILDL+TVGKIIK
Sbjct: 419 SNTSTIDLNIIGEKISSQDRVIGAHFFSPAHIMPLLEIVRTNKTSAQVILDLVTVGKIIK 478
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVNR FFPY+Q A L +LGVDVFRID I +FGLP+GPFQ
Sbjct: 479 KSPVVVGNCTGFAVNRTFFPYAQGAHFLANLGVDVFRIDRLISNFGLPMGPFQ 531
>gi|297799088|ref|XP_002867428.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
gi|297313264|gb|EFH43687.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
Length = 721
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/530 (76%), Positives = 476/530 (89%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTM+VGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVLTGN GRFSGGF
Sbjct: 7 VTMDVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLTGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPLVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
APK QLGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGQKLGLIDALVP 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++L SR WALDIA RKP++RSLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIADGRKPFLRSLHRTDKIGSLSEARAILKNSRQLAKKVAPNMPQHH 246
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC++VIEEGIVHGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIVHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAVIGGGLMGSGI TA +L+NI VVLKE+NSEYL+KG K++EAN++GLV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGITTALLLSNIRVVLKEINSEYLMKGTKSVEANIKGLVSRGKLT 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDKA AL + KGVLDY+EFKDVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFKDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDL+++GEKT+S+DRI+GAHFFSPAH+M LLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMTLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VGNC GFAVNR FFPY+Q+A +L +LGVD+FRIDS I SFGLP+GPFQ G
Sbjct: 487 VGNCIGFAVNRTFFPYTQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLG 536
>gi|356531273|ref|XP_003534202.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/533 (78%), Positives = 476/533 (89%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P+V EVG DGVA+IT+ NPPVNALAIPI+ GLK++F+EA R+DVKAIVLTG GGR
Sbjct: 1 MALPKVDFEVGADGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S +PDVSVELVVN IED KKP+VAAV GLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHRTGDSSHLPDVSVELVVNSIEDSKKPVVAAVAGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR+AAP+ QLGLPELTLG+IPGFGGTQRLPRL+GLSKA+EMML SK ITSEEG KLGLI
Sbjct: 121 HARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V+SEELL SRLWAL+I R KPW+RSLHRTDK+GSLSEAREVL+ AR Q KKT P+
Sbjct: 181 DAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLSEAREVLRTARQQVKKTVPH 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+PQ AC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DT++GL++VFF+QRA SKVP VTD
Sbjct: 241 LPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKGLINVFFSQRAISKVPGVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGLKPR V+K AVIGGGLMGSGIATA IL NI+V+LKE+N E+LLKGIKTIEANV GLV
Sbjct: 301 IGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINPEFLLKGIKTIEANVNGLVR 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKLT+ KA+ AL +L+GVLDYSEFKDVD+VIEAVIE++ LKQ IFS+LEK CPPHCILA
Sbjct: 361 RGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISLKQTIFSDLEKICPPHCILA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDL++VG+ TSSQ+RI GAHFFSPAH+MPLLEI+RT++TSAQVILDL+TVGKIIK
Sbjct: 421 SNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRTDKTSAQVILDLITVGKIIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID+ IR+FG PIGPFQ
Sbjct: 481 KTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTLIRNFGFPIGPFQ 533
>gi|15235527|ref|NP_194630.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75315624|sp|Q9ZPI6.1|AIM1_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1; AltName: Full=Protein ABNORMAL
INFLORESCENCE MERISTEM 1; Short=AtAIM1; Includes:
RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|4337025|gb|AAD18041.1| AIM1 protein [Arabidopsis thaliana]
gi|4972047|emb|CAB43915.1| AIM1 protein [Arabidopsis thaliana]
gi|7269799|emb|CAB79659.1| AIM1 protein [Arabidopsis thaliana]
gi|16648891|gb|AAL24297.1| AIM1 protein [Arabidopsis thaliana]
gi|18175606|gb|AAL59895.1| putative AIM1 protein [Arabidopsis thaliana]
gi|20465649|gb|AAM20293.1| putative AIM1 protein [Arabidopsis thaliana]
gi|332660172|gb|AEE85572.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 721
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/530 (76%), Positives = 476/530 (89%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
APK QLGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDKA AL + KGVLDY+EF DVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS I SFGLP+GPFQ G
Sbjct: 487 VGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLG 536
>gi|147827212|emb|CAN66465.1| hypothetical protein VITISV_006222 [Vitis vinifera]
Length = 859
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/618 (67%), Positives = 473/618 (76%), Gaps = 85/618 (13%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIP--------------------IVAGLKDKF 40
M+ VTMEVGNDGVA+IT+ NPPVNALA+ ++AGLK+K+
Sbjct: 1 MSKAEVTMEVGNDGVAVITMSNPPVNALALASTVYISEFLWNFDFGSLILCVIAGLKEKY 60
Query: 41 EEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100
EA R+DVKAIV+TG GGRFSGGFDINVFQKVH D+S +PD S++L+VN +ED KKP
Sbjct: 61 AEAMRRNDVKAIVVTGKGGRFSGGFDINVFQKVHKTADISHLPDASIDLLVNTVEDAKKP 120
Query: 101 IVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160
VAAVEGLALGGGLE+AM CHARIAAPKTQLGLPEL+LGV PGFGGTQRLPRLVGLSKAI
Sbjct: 121 SVAAVEGLALGGGLEVAMACHARIAAPKTQLGLPELSLGVXPGFGGTQRLPRLVGLSKAI 180
Query: 161 EMM-----------LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209
EMM LSKSI+SEEG+KLGL+DA+V+SEELLKVSR WALDI +RKPW+R
Sbjct: 181 EMMRLPLSDVNKFLQLSKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVR 240
Query: 210 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 269
SLH+T+KLGS+SEA +LK++R QA+KT P++PQHQACLDVIEEGIVHGGYSG+LKE KV
Sbjct: 241 SLHQTEKLGSVSEALXILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKV 300
Query: 270 F--------------------------KELVMLDTSR----------------------- 280
F ++L+MLD S
Sbjct: 301 FNXLVLSDTAKGLIHVFFAQRATSKALQKLLMLDPSLRTIYWLCWGQGPGHSCLCVGYLP 360
Query: 281 -----GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 335
G + VPNVTDIGLKPR V+KVAVIGGGLMGSGIATA I +NIYVV
Sbjct: 361 IELPVGAITALMQNLILGTVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVV 420
Query: 336 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 395
LKEVNSEYLLKGIKTIEANVRGLVT+GKLTQDKA AL MLKGVLDYSEFKD+DMVIEAV
Sbjct: 421 LKEVNSEYLLKGIKTIEANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAV 480
Query: 396 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 455
IE++ LKQKIFSE+EK C PHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPL
Sbjct: 481 IENIXLKQKIFSEIEKICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPL 540
Query: 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 515
LE+VRTE+TSAQVILDLMTVGK IKK+PVVVG+CTGFAVNR FFPY+Q A LV+LGVD
Sbjct: 541 LEVVRTEKTSAQVILDLMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDP 600
Query: 516 FRIDSAIRSFGLPIGPFQ 533
FRID I +FGLP+GPFQ
Sbjct: 601 FRIDWVISNFGLPMGPFQ 618
>gi|242061308|ref|XP_002451943.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
gi|241931774|gb|EES04919.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
Length = 727
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/529 (75%), Positives = 459/529 (86%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+AGLKDK+ EA RDDVKAIVLTG GG+F GG
Sbjct: 7 RVTMEVGADGVALITIANPPVNALHPIIIAGLKDKYAEAMRRDDVKAIVLTGAGGKFCGG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVSLMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 67 FDINVFTKVHQTGDVSLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELIMGCHARI 126
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 127 STPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 186
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ +EL+K SRLWAL+IA RKPW+RSL RTD+LGSLSEAR VL AR QA K APNMPQH
Sbjct: 187 SPDELIKTSRLWALEIANCRKPWMRSLGRTDRLGSLSEARAVLNAARQQAMKIAPNMPQH 246
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
QACLDV+EEGI++GG +GVLKEAKVFKELV+ TS+ LVHVFFAQR+T+KVP VTD+ LK
Sbjct: 247 QACLDVMEEGILYGGQAGVLKEAKVFKELVIAPTSKALVHVFFAQRSTTKVPGVTDVQLK 306
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN ++L +G K I N+ GLV RG L
Sbjct: 307 PRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNPQFLQRGEKMIAGNLEGLVKRGSL 366
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+D+ + A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS++EK CP HCILATNTS
Sbjct: 367 TKDRMHKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDIEKICPKHCILATNTS 426
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 427 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 486
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q + LLVSLG+DVFRID I SFG+P+GPFQ
Sbjct: 487 VVGNCTGFAVNRTFFPYTQGSHLLVSLGIDVFRIDRVISSFGMPMGPFQ 535
>gi|115445513|ref|NP_001046536.1| Os02g0274100 [Oryza sativa Japonica Group]
gi|116257652|sp|Q8W1L6.2|MFP_ORYSJ RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein; Short=MFP; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|47848048|dbj|BAD21833.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Oryza sativa Japonica Group]
gi|113536067|dbj|BAF08450.1| Os02g0274100 [Oryza sativa Japonica Group]
Length = 726
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/531 (74%), Positives = 458/531 (86%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQ
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQ 534
>gi|357141979|ref|XP_003572416.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein-like [Brachypodium distachyon]
Length = 726
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/529 (74%), Positives = 457/529 (86%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG G+F GG
Sbjct: 6 RVTMEVGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGG 65
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDV+LMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 66 FDINVFTKVHETGDVTLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELTMGCHARI 125
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+ P+ QLGLPELTLGVIPGFGGTQRLPRLVGL KAIEMML SK IT++EG + G +DA+
Sbjct: 126 STPEAQLGLPELTLGVIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGFVDALC 185
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QAKK A NMPQH
Sbjct: 186 SPDELIKLSRFWALEIANCRKPWIRSLGRTDRLGSLSEARAVLNMAREQAKKVALNMPQH 245
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
QACLDVIEEG+V GG++GV+KEAKVFKELV+ TS+ LVHVFFAQR+T+KVP VTDI +K
Sbjct: 246 QACLDVIEEGVVFGGHAGVVKEAKVFKELVLSTTSKALVHVFFAQRSTTKVPGVTDIQIK 305
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++KVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G TI N+ GLV RG L
Sbjct: 306 PRQIKKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLKRGQNTIAGNLEGLVKRGSL 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IF+++EK CPPHCILATNTS
Sbjct: 366 TKDKMNKAISLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPPHCILATNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN+VGEKT SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 426 TIDLNVVGEKTKSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q ++LLVSLG+D+FRID I SFG+P+GPFQ
Sbjct: 486 VVGNCTGFAVNRTFFPYTQGSQLLVSLGIDLFRIDRVISSFGMPLGPFQ 534
>gi|218190472|gb|EEC72899.1| hypothetical protein OsI_06722 [Oryza sativa Indica Group]
Length = 726
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/531 (74%), Positives = 458/531 (86%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR V+ AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVINSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQ
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQ 534
>gi|326524910|dbj|BAK04391.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525701|dbj|BAJ88897.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/529 (74%), Positives = 457/529 (86%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLKDK+ EA RDDV+A+VLTG G+F GG
Sbjct: 8 RVTMEVGADGVALITICNPPVNALHPIIIQGLKDKYAEAFHRDDVRAVVLTGAVGKFCGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 68 FDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALGGGLELTMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P+ QLGLPELTLGVIPG GGTQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 128 ATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 187
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QA K A NMPQH
Sbjct: 188 SPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMARQQANKAAANMPQH 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
QACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+T+KVP VTDI LK
Sbjct: 248 QACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRSTTKVPGVTDIQLK 307
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI N+ GLV RG L
Sbjct: 308 PRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTIAGNLEGLVKRGSL 367
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK CPPHCILATNTS
Sbjct: 368 TKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEKICPPHCILATNTS 427
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 428 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 487
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GPFQ
Sbjct: 488 VVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGPFQ 536
>gi|326525937|dbj|BAJ93145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/529 (74%), Positives = 456/529 (86%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLKDK+ EA RDDV+A+VLTG G+F GG
Sbjct: 8 RVTMEVGADGVALITICNPPVNALHPIIIQGLKDKYAEAFHRDDVRAVVLTGAVGKFCGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 68 FDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALGGGLELTMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P+ QLGLPELTLGVIPG GGTQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 128 ATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 187
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QA K A NMPQH
Sbjct: 188 SPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMARQQANKAAANMPQH 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
QACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+T+KVP VTDI LK
Sbjct: 248 QACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRSTTKVPGVTDIQLK 307
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI N+ GLV RG L
Sbjct: 308 PRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTIAGNLEGLVKRGSL 367
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK CPPHCILATNTS
Sbjct: 368 TKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEKICPPHCILATNTS 427
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TID N+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 428 TIDSNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 487
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GPFQ
Sbjct: 488 VVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGPFQ 536
>gi|226510010|ref|NP_001148087.1| LOC100281695 [Zea mays]
gi|195615714|gb|ACG29687.1| peroxisomal fatty acid beta-oxidation multifunctional protein [Zea
mays]
Length = 727
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/529 (74%), Positives = 456/529 (86%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+AGLKDK+ EA RDDVKAIVLTG GG+F GG
Sbjct: 7 RVTMEVGADGVALITIANPPVNALHPIIIAGLKDKYAEAMRRDDVKAIVLTGAGGKFCGG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVSLMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 67 FDINVFTKVHQTGDVSLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELTMGCHARI 126
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK I ++EG + GLIDA+
Sbjct: 127 STPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFIAAKEGKERGLIDALC 186
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ EL+K SRLWAL+IA RKPW+RSL RTD+L SLSEAR VL AR QA K +PNMPQH
Sbjct: 187 SPNELIKTSRLWALEIANCRKPWMRSLGRTDRLASLSEARAVLNAARQQAMKVSPNMPQH 246
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
QACLDV+EEGI++GG +GVLKEA+VFKELV+ TS+ LVHVFFAQR+T+KVP VTD+ LK
Sbjct: 247 QACLDVMEEGILYGGQAGVLKEARVFKELVVAPTSKALVHVFFAQRSTTKVPGVTDVQLK 306
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN ++L +G K I N+ GL+ +G L
Sbjct: 307 PRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNPQFLQRGEKMIAGNLEGLIKKGSL 366
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+D+ + A+ + KG LDYS+FKDVDMVIEAVIE +PLKQ IFS++EK CP HCILATNTS
Sbjct: 367 TKDRMHKAMSLFKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDIEKICPKHCILATNTS 426
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 427 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 486
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q++ LLVSLG+DVFRID I SFG+P+GPFQ
Sbjct: 487 VVGNCTGFAVNRTFFPYTQASHLLVSLGIDVFRIDRVISSFGMPMGPFQ 535
>gi|33338559|gb|AAQ13901.1| multifunctional protein [Oryza sativa]
Length = 718
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/526 (74%), Positives = 454/526 (86%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F GGFDI
Sbjct: 1 MEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFCGGFDI 60
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
NVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHARI+ P
Sbjct: 61 NVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHARISTP 120
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA+ + +
Sbjct: 121 EAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLVDALCSPD 180
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+PQHQAC
Sbjct: 181 ELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLPQHQAC 240
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
LDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+ LKPR
Sbjct: 241 LDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQLKPRK 300
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG LT+D
Sbjct: 301 IRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKD 360
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATNTSTID
Sbjct: 361 KMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTID 420
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
LN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKVPVVVG
Sbjct: 421 LNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVG 480
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQ
Sbjct: 481 NCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQ 526
>gi|17105223|gb|AAL35606.1|AF442962_1 peroxisomal multifunctional protein [Oryza sativa]
Length = 725
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/531 (74%), Positives = 456/531 (85%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++ +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFRQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDY +FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYCDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQ
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQ 534
>gi|148910098|gb|ABR18131.1| unknown [Picea sitchensis]
Length = 723
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/528 (69%), Positives = 447/528 (84%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+MEVG DGVAII + NPPVNALA+ ++AGLK+K++EA R+DVKAIV+TGNGG+FSGGF
Sbjct: 6 VSMEVGADGVAIIKMTNPPVNALAVTVLAGLKEKYDEAMRRNDVKAIVVTGNGGKFSGGF 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINV Q+V G++S + VSV+L++N IED KKP VAA++GLALGGGLELAM CHARI+
Sbjct: 66 DINVIQEVQQTGNLSHLGRVSVDLMINTIEDAKKPSVAAIQGLALGGGLELAMSCHARIS 125
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
PK LGLPEL LG+ PGFGGTQRLPRLVGL KA+EMMLLSKSI SEEG KLGLIDAVV+
Sbjct: 126 TPKALLGLPELQLGIFPGFGGTQRLPRLVGLQKAVEMMLLSKSIMSEEGNKLGLIDAVVS 185
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
EL+ +R+WALDIA RR+PWI SL RTDKL SL EARE+LK AR QAKKTAPN+P Q
Sbjct: 186 PGELMTTARMWALDIAERRRPWIISLKRTDKLESLGEAREILKFARAQAKKTAPNLPHPQ 245
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
CLDVIEEGIV GG +GVLKE K F ++V+ DT++GLVH FF+QRAT+KVP VTD+GLKP
Sbjct: 246 LCLDVIEEGIVAGGLAGVLKEEKGFNDIVISDTAKGLVHFFFSQRATTKVPGVTDLGLKP 305
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAV+GGGLMGSGIAT+ +L+NI VVLKEVN+ +L +GI I AN++ V +G +T
Sbjct: 306 RQIKKVAVLGGGLMGSGIATSLVLSNIPVVLKEVNAGFLQQGINRISANLKSRVKKGSMT 365
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++K + ++ GV+DY+EF++VDMVIEAV+E + LKQ+IFS+LEK CP HCILATNTST
Sbjct: 366 EEKFEKTMSLITGVVDYAEFRNVDMVIEAVLEKISLKQEIFSDLEKICPAHCILATNTST 425
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDLN++G KT QDRIIGAHFFSPAHVMPLLEIVRTE+TS Q+I+DL+ VGK IKKVPVV
Sbjct: 426 IDLNLIGAKTHVQDRIIGAHFFSPAHVMPLLEIVRTEKTSPQIIIDLINVGKNIKKVPVV 485
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNCTGFAVNR FFPY+Q+A +L +LGVD++RID I SFG+P+GPF+
Sbjct: 486 VGNCTGFAVNRMFFPYTQAAHMLANLGVDIYRIDKVITSFGMPMGPFR 533
>gi|326506022|dbj|BAJ91250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 692
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/482 (74%), Positives = 416/482 (86%)
Query: 52 IVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALG 111
+ G G+F GGFDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALG
Sbjct: 19 LYFIGAVGKFCGGFDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALG 78
Query: 112 GGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171
GGLEL MGCHARIA P+ QLGLPELTLGVIPG GGTQRLPRLVGL KAIEMML SK IT+
Sbjct: 79 GGLELTMGCHARIATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITA 138
Query: 172 EEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231
+EG + GLIDA+ + +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR
Sbjct: 139 KEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMAR 198
Query: 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291
QA K A NMPQHQACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+
Sbjct: 199 QQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRS 258
Query: 292 TSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351
T+KVP VTDI LKPR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI
Sbjct: 259 TTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTI 318
Query: 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 411
N+ GLV RG LT+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK
Sbjct: 319 AGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEK 378
Query: 412 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 471
CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILD
Sbjct: 379 ICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILD 438
Query: 472 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
L+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GP
Sbjct: 439 LITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGP 498
Query: 532 FQ 533
FQ
Sbjct: 499 FQ 500
>gi|116787358|gb|ABK24476.1| unknown [Picea sitchensis]
Length = 726
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/533 (64%), Positives = 430/533 (80%), Gaps = 5/533 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EVG+DGVA+IT+ NPPVN+L++ ++ GLK+K++EA RDDVKAIV+TG+GG+F GGF
Sbjct: 6 VDIEVGSDGVALITITNPPVNSLSVDVLLGLKEKYDEALQRDDVKAIVITGSGGKFCGGF 65
Query: 66 DINVFQKV-HGA----GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
DI + HGA G+ + DVSV+++ L E KKP VAA++GLALGGGLE+AM C
Sbjct: 66 DIGTLGGLQHGAVKIGGEQFELTDVSVKIITELFEGAKKPSVAAIDGLALGGGLEIAMAC 125
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H RIAAP+ QLGLPEL LGVIPGFGGTQRLPRLVGLSKA+EM+LLSK I SEE +LGL+
Sbjct: 126 HGRIAAPQAQLGLPELQLGVIPGFGGTQRLPRLVGLSKALEMILLSKPIKSEEASELGLV 185
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV ELL +R WALDIA R+PWIRSL+RTDKL L EARE+LK AR+QA+K A N
Sbjct: 186 DAVVPPLELLNSARRWALDIAEFRRPWIRSLYRTDKLEPLGEAREILKFARIQAQKRAAN 245
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ CLDVIEEGIV G +G++KE F++L+ D ++ L+HVFF+QR TSKVP VTD
Sbjct: 246 LKHPLVCLDVIEEGIVSGPMAGLVKEVSSFQQLLHSDNAKALIHVFFSQRLTSKVPGVTD 305
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GLKPR VRKVAV+GGGLMGSGIATA IL+ V+LKEVN +L G++ I+AN++ V
Sbjct: 306 VGLKPRRVRKVAVLGGGLMGSGIATALILSGYPVILKEVNDRFLQAGLERIKANLQSRVN 365
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GK++Q+K ++ G +DY F++VD+VIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 366 KGKMSQEKFEKIFSLVHGTVDYENFRNVDIVIEAVIENVALKQQIFSDLEKFCPPHCVLA 425
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL+++G+KT+SQDRI+GAHFFSPAH+MPLLEIVRTE+TS QVI+DLM VGK IK
Sbjct: 426 TNTSTIDLSLIGQKTNSQDRIVGAHFFSPAHIMPLLEIVRTEKTSPQVIVDLMDVGKKIK 485
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFPY+QSA L LG+DV+RID I SFG+P+GPF+
Sbjct: 486 KTPIVVGNCTGFAVNRMFFPYTQSALFLTDLGLDVYRIDIVITSFGMPMGPFR 538
>gi|225431755|ref|XP_002270067.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a [Vitis vinifera]
Length = 724
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/529 (63%), Positives = 416/529 (78%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEVG DGVA+ITLINPPVN+L+ ++ LK+ +EEA RDDVKAIV+TG G+FSGG
Sbjct: 8 RTVMEVGADGVALITLINPPVNSLSFDVLNSLKESYEEALRRDDVKAIVITGAKGKFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDI F + G+VS VSVE++ + +E +KP VAA++GLALGGGLE+AMGCHARI
Sbjct: 68 FDITAFGGIQAGGEVSKPGFVSVEILTDTVEAARKPSVAAIDGLALGGGLEVAMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML+SK + + LGL+DAVV
Sbjct: 128 STPNAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLMSKPVKGVDAHSLGLVDAVV 187
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++L+K +R WALDI R+PW+ SL++TDKL L EARE+LK AR QA+K APN+
Sbjct: 188 APDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLGEAREILKFARTQAQKQAPNLKHP 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+DVIE GIV G +G+ KEA+ F+EL+ D + LVH+FFAQR TSKVP + D+GL
Sbjct: 248 LLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKSLVHIFFAQRGTSKVPGIADLGLV 307
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI + AN++ V +G +
Sbjct: 308 PRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNEKFLQAGIGRVRANLQSRVKKGAM 367
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
TQ+K +LKGVLDY FKDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTS
Sbjct: 368 TQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSLKQQIFADLEKFCPPHCILASNTS 427
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN++GEKT S DRI+GAHFFSPAHVMPLLEIVRT+RTS QVI+DL+ +GK IKK PV
Sbjct: 428 TIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRTQRTSPQVIVDLLDIGKKIKKTPV 487
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR F PY+Q+A LLV G DV++ID AI FG+P+GPF+
Sbjct: 488 VVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRAITKFGMPMGPFR 536
>gi|449522795|ref|XP_004168411.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 2 [Cucumis sativus]
gi|34922495|sp|Q39659.1|MFPA_CUCSA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|551428|emb|CAA55630.1| tetrafunctional protein [Cucumis sativus]
Length = 725
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/533 (62%), Positives = 421/533 (78%), Gaps = 1/533 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFR 537
>gi|449522793|ref|XP_004168410.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 1 [Cucumis sativus]
Length = 794
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/533 (62%), Positives = 421/533 (78%), Gaps = 1/533 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFR 537
>gi|449460957|ref|XP_004148210.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like
[Cucumis sativus]
Length = 713
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/533 (62%), Positives = 420/533 (78%), Gaps = 1/533 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++KVA++GGGLMGSGIATA IL+N VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYPVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFR 537
>gi|224107106|ref|XP_002314377.1| predicted protein [Populus trichocarpa]
gi|222863417|gb|EEF00548.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/530 (63%), Positives = 416/530 (78%), Gaps = 1/530 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R T+EVG DGVA+IT+INPPVN+L+ ++ LKD FE+A RDDVKAIV+TG G+FSGG
Sbjct: 9 RTTIEVGADGVALITIINPPVNSLSFDVLYSLKDSFEQALRRDDVKAIVITGAKGKFSGG 68
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F V G P +SVE++ + +E KKP VAA++GLALGGGLE+AM CHAR
Sbjct: 69 FDISSFGGVQGGKSNEPKPGFISVEILSDTVEAAKKPSVAAIDGLALGGGLEVAMACHAR 128
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
I+ QLGLPEL LG+IPGFGGTQRLPRLVG+SKA+EMML SK + EE LGL+DAV
Sbjct: 129 ISTSTAQLGLPELQLGLIPGFGGTQRLPRLVGISKALEMMLTSKPVKGEEAHALGLVDAV 188
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
V+ EL+ +R WALDI RR+PWI SL++T+KL SL EARE+ K AR Q +K APN+
Sbjct: 189 VSPNELVSTARQWALDILERRRPWIASLYKTEKLDSLGEAREIFKFAREQVRKRAPNLTH 248
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
C+DVIE GIV G G+ KE + F ELV DT + L+H+FFAQR T+KVP +TD+GL
Sbjct: 249 PIVCIDVIEHGIVSGPRDGLYKELESFHELVRSDTCKSLIHIFFAQRGTTKVPGITDLGL 308
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR V+KVAV+GGGLMGSGIATA +L+N V+LKEVN+++L GI + AN++ V +G+
Sbjct: 309 VPRRVKKVAVLGGGLMGSGIATALVLSNYPVILKEVNNQFLQAGIGRVRANLQSRVKKGR 368
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+TQ+K + +LKG LDY FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHCILA+NT
Sbjct: 369 MTQEKFEKTMSLLKGALDYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCILASNT 428
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT++TS QVI+DL+ VGK I+K P
Sbjct: 429 STIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRTKQTSPQVIVDLLDVGKKIRKTP 488
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGFAVNR FFPY+Q+A LLV G D+++ID I FG+P+GPF+
Sbjct: 489 VVVGNCTGFAVNRMFFPYTQAALLLVEHGADLYQIDKVITKFGMPMGPFR 538
>gi|210257071|dbj|BAG80663.1| multifunctional protein [Nicotiana tabacum]
Length = 668
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/528 (64%), Positives = 416/528 (78%), Gaps = 5/528 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ ME+GNDGVA+IT+ NPPVNAL + + LK ++EA D VKAIVL+G GRF GG
Sbjct: 7 INMEIGNDGVAVITVHNPPVNALTLSALEELKRCYQEAIDSDTVKAIVLSGADGRFCGGL 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+V + VH GD+SL+PD S+ LVVN +E+ KKP VAA++G ALGGGLELAMGC ARIA
Sbjct: 67 DISVVENVHKHGDISLLPDASIGLVVNKMENGKKPSVAAIQGFALGGGLELAMGCSARIA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
K LGLPEL LGVIPG GGTQRLPRLVG SKA++M++ SK+ITSEEG +LGLIDA+V+
Sbjct: 127 TAKADLGLPELKLGVIPGCGGTQRLPRLVGTSKAVDMLMSSKTITSEEGKELGLIDAIVS 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
SEELL V+R WALDI R+P SL +TDKLG E+ E+LK AR + + P +
Sbjct: 187 SEELLAVARCWALDIVEGRQPHCNSLEKTDKLGPKDESLEILKSARQRYRA-----PHYS 241
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
ACLDVIEEGI+ GG+SGVLKE KVFKELV+ +T++GL+HVF A+RATSKVP VTDIGLKP
Sbjct: 242 ACLDVIEEGIISGGFSGVLKEDKVFKELVLSNTAKGLLHVFLAERATSKVPGVTDIGLKP 301
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + KVAV+GGGLMGSGIATA I++N+ VV+KE+N EYLLK +K++EAN++GLVTRG+L
Sbjct: 302 RRIEKVAVVGGGLMGSGIATALIMSNMNVVVKEINHEYLLKAMKSVEANLQGLVTRGQLN 361
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDK L +LKG LDY + KDVDMVIEAV E V LKQ IF ++EK C P CI A+NTST
Sbjct: 362 QDKMKRTLSLLKGTLDYEDLKDVDMVIEAVNEVVSLKQSIFEDIEKVCSPDCIFASNTST 421
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
I L+++GE+TSSQDRI+G H FSPAHVM L+EIVRTE TS QVI+D++ K +KKVP+V
Sbjct: 422 ISLDVIGERTSSQDRILGIHLFSPAHVMTLVEIVRTENTSPQVIVDVIRFTKTMKKVPIV 481
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V NCTGFAVNR FFPY Q LL +LGVD+FR+D I FG+ +GPFQ
Sbjct: 482 VKNCTGFAVNRNFFPYMQGPDLLANLGVDIFRVDRVITEFGMRLGPFQ 529
>gi|171854673|dbj|BAG16526.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Capsicum chinense]
Length = 725
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/530 (62%), Positives = 420/530 (79%), Gaps = 1/530 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R T++VG DGVA+IT+INPPVN+LA+ ++ LK+ +E+A RDDVKAIV+TG G+FSGG
Sbjct: 8 RTTIDVGADGVAVITIINPPVNSLALDVLYSLKENYEQALRRDDVKAIVVTGANGKFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F K+ G S P +SVE++ + +E +KP VAA++GLALGGGLE+AM CHAR
Sbjct: 68 FDISAFGKLQGGTVESPKPGFISVEILTDTVEAARKPSVAAIDGLALGGGLEVAMACHAR 127
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
I+ P QLGLPEL LGV+PGFGGTQRLPRLVGL+K++EM+L SK + EE LGL+DAV
Sbjct: 128 ISTPNAQLGLPELQLGVLPGFGGTQRLPRLVGLAKSLEMILTSKPVKGEEAVNLGLVDAV 187
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
V S +LL +R WALDI RKPW+ SLH+TDK+ L EARE+ K AR+Q +K APN+
Sbjct: 188 VPSNQLLGTARKWALDILECRKPWVASLHKTDKIEPLGEAREIFKFARVQTRKQAPNLQH 247
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+DVIEEGIV G +G+ KEA+ F+ L+ DT + LV+VFFAQRAT+KVP VTD+GL
Sbjct: 248 LLVVIDVIEEGIVSGPLAGLWKEAEAFQALLHSDTCKALVNVFFAQRATTKVPGVTDLGL 307
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
KPR ++KVA++GGGLMGSGIATA + + V+LKEVN ++L G+ ++AN++ V +GK
Sbjct: 308 KPRRIKKVAILGGGLMGSGIATALLRSGYPVILKEVNDKFLQAGLGRVKANLQSSVKKGK 367
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
++Q+K L +LKG LDY F+DVDMVIEAVIE+V LKQ++F++LEK CP HCILA+NT
Sbjct: 368 MSQEKFEKTLSLLKGALDYEGFRDVDMVIEAVIENVSLKQQVFADLEKYCPSHCILASNT 427
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDLN++GEKT SQDRIIGAHFFSPAHVMPLLEIVRT++TS Q+I+DL+ VGK IKK P
Sbjct: 428 STIDLNLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTQKTSPQIIVDLLDVGKKIKKTP 487
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGFAVNR FFPY+Q+A LLV G DVFRID I FG+P+GPF+
Sbjct: 488 VVVGNCTGFAVNRMFFPYTQAALLLVERGADVFRIDRIITKFGMPMGPFR 537
>gi|302792475|ref|XP_002978003.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
gi|300154024|gb|EFJ20660.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
Length = 721
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/533 (65%), Positives = 438/533 (82%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P V++EVG D VA+ITL NPPVNALA+P++ GLK+K+EEA SR+DVKAIV+TG G+
Sbjct: 1 MARPGVSLEVGADKVAVITLRNPPVNALAMPVLWGLKEKYEEACSREDVKAIVVTGANGK 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+ Q V +G++S + +SV+L+ LIE+ KP VAA++GLALGGGLELAM C
Sbjct: 61 FSGGFDISTIQDVQASGNMSALGRISVDLMTKLIEEAGKPSVAAIQGLALGGGLELAMCC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR+AAPK QLGLPEL LG+IPGFGGTQRLPRLVGL+KAIEMMLLSK +TSEEG +LGL+
Sbjct: 121 HARVAAPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPVTSEEGKELGLV 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D +V +E +L +R A+DIA R+PW +LH+TDKL L EARE+LK AR QA KTAP
Sbjct: 181 DELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLGEAREILKFARAQAMKTAPK 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ CLD IEEGIV GG++G+LKE K F+E + D S+ L H+FFAQR+TSKVP VTD
Sbjct: 241 LTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKSLTHIFFAQRSTSKVPGVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS++L +G+ ++ N++ V
Sbjct: 301 VGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNSDFLQQGLNRVKGNLQSRVK 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKL++DK A+ +++GVLDY +F VD+VIEAV+E+V LKQ+IF++LEK C P C+LA
Sbjct: 361 KGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGLKQQIFADLEKFCSPSCVLA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRTE+TS QVILDLMT+GK IK
Sbjct: 421 SNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRTEKTSPQVILDLMTLGKTIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PVVVGNCTGFAVNR FFPY+Q+A +L+ LGVD +RID AI FG+P+GPF+
Sbjct: 481 KIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGVDPYRIDRAITGFGMPMGPFR 533
>gi|302766649|ref|XP_002966745.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
gi|300166165|gb|EFJ32772.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
Length = 721
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/533 (65%), Positives = 438/533 (82%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P V++EVG D VA+ITL NPPVNALA+P++ GLK+K+EEA SR+DVKAIV+TG G+
Sbjct: 1 MARPGVSLEVGADKVAVITLRNPPVNALAMPVLWGLKEKYEEACSREDVKAIVVTGANGK 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+ Q V +G++S + +SV+L+ LIE+ KP VAA++GLALGGGLELAM C
Sbjct: 61 FSGGFDISTIQDVQASGNMSALGRISVDLMTKLIEEAGKPSVAAIQGLALGGGLELAMCC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR+AAPK QLGLPEL LG+IPGFGGTQRLPRLVGL+KAIEMMLLSK +TSEEG +LGL+
Sbjct: 121 HARVAAPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPVTSEEGKELGLV 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D +V +E +L +R A+DIA R+PW +LH+TDKL L EARE+LK AR QA KTAP
Sbjct: 181 DELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLGEAREILKFARAQAMKTAPK 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ CLD IEEGIV GG++G+LKE K F+E + D S+ L H+FFAQR+TSKVP VTD
Sbjct: 241 LTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKSLTHIFFAQRSTSKVPGVTD 300
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS++L +G+ ++ N++ V
Sbjct: 301 VGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNSDFLQQGLNRVKGNLQSRVK 360
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKL++DK A+ +++GVLDY +F VD+VIEAV+E+V LKQ+IF++LEK C P C+LA
Sbjct: 361 KGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGLKQQIFADLEKFCSPSCVLA 420
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRTE+TS QVILDLMT+GK IK
Sbjct: 421 SNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRTEKTSPQVILDLMTLGKTIK 480
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PVVVGNCTGFAVNR FFPY+Q+A +L+ LG+D +RID AI FG+P+GPF+
Sbjct: 481 KIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGIDPYRIDRAITGFGMPMGPFR 533
>gi|296083347|emb|CBI22983.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/570 (58%), Positives = 418/570 (73%), Gaps = 41/570 (7%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALA----------------------------------- 29
R MEVG DGVA+ITLINPPVN+L+
Sbjct: 8 RTVMEVGADGVALITLINPPVNSLSFDECSLRLRFEVLLSFSRKWEEFIFLLDALKRKKG 67
Query: 30 ------IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83
+P++ LK+ +EEA RDDVKAIV+TG G+FSGGFDI F + G+VS
Sbjct: 68 LPVKLHLPVLNSLKESYEEALRRDDVKAIVITGAKGKFSGGFDITAFGGIQAGGEVSKPG 127
Query: 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG 143
VSVE++ + +E +KP VAA++GLALGGGLE+AMGCHARI+ P QLGLPEL LG+IPG
Sbjct: 128 FVSVEILTDTVEAARKPSVAAIDGLALGGGLEVAMGCHARISTPNAQLGLPELQLGIIPG 187
Query: 144 FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203
FGGTQRLPRLVGLSKA+EMML+SK + + LGL+DAVV ++L+K +R WALDI
Sbjct: 188 FGGTQRLPRLVGLSKALEMMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILEC 247
Query: 204 RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGV 263
R+PW+ SL++TDKL L EARE+LK AR QA+K APN+ C+DVIE GIV G +G+
Sbjct: 248 RRPWVHSLYKTDKLEPLGEAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGL 307
Query: 264 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 323
KEA+ F+EL+ D + LVH+FFAQR TSKVP + D+GL PR + KVA++GGGLMGSGI
Sbjct: 308 WKEAEAFQELLHSDICKSLVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGI 367
Query: 324 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383
ATA +L+N V+LKEVN ++L GI + AN++ V +G +TQ+K +LKGVLDY
Sbjct: 368 ATALMLSNYPVILKEVNEKFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYE 427
Query: 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 443
FKDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTSTIDLN++GEKT S DRI+G
Sbjct: 428 SFKDVDMVIEAVIENVSLKQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVG 487
Query: 444 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 503
AHFFSPAHVMPLLEIVRT+RTS QVI+DL+ +GK IKK PVVVGNCTGFAVNR F PY+Q
Sbjct: 488 AHFFSPAHVMPLLEIVRTQRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQ 547
Query: 504 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+A LLV G DV++ID AI FG+P+GPF+
Sbjct: 548 AALLLVEHGADVYQIDRAITKFGMPMGPFR 577
>gi|351723429|ref|NP_001234975.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
gi|167962162|dbj|BAG09370.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
Length = 723
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/526 (61%), Positives = 413/526 (78%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA+IT++NPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MEVGPDGVAVITIVNPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +SVE++ + IE +KP VAA++GLALGGGLE+AM C+AR++ P
Sbjct: 70 SAFGGIQEAKERPKPGWISVEIITDTIEAARKPSVAAIDGLALGGGLEVAMACNARLSTP 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
QLGLPEL LG+IPGFGGTQRLPRLVGL+K +EM+L SK + +E + LGL+D +V+
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKGLEMILASKPVKGKEAFSLGLVDGLVSPN 189
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+L+ +R WALD+ R+PWI SL++T+KL L EARE+LK AR QA+K APN+ C
Sbjct: 190 DLVNTARQWALDMLGHRRPWIASLYKTEKLEPLGEAREILKFARAQARKRAPNLQHPLVC 249
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+DVIE GIV G +G+ KEA+ F+ LV DT + LVHVFFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKSLVHVFFAQRGTSKVPGVTDCGLAPRQ 309
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GKLT++
Sbjct: 310 VKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLDAGINRIKANLQSRVKKGKLTKE 369
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ +LKG LDY F+DVDMVIEAVIE++ LKQ+IFS+LEK CPPHCILA+NTSTID
Sbjct: 370 NFEKTISLLKGSLDYESFRDVDMVIEAVIENISLKQQIFSDLEKYCPPHCILASNTSTID 429
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
LN++GEKT +QDRI+GAHFFSPAHVMPLLEIVRT++TSAQVI+D++ + K IKK PVVVG
Sbjct: 430 LNLIGEKTKTQDRIVGAHFFSPAHVMPLLEIVRTKQTSAQVIVDVLDISKKIKKTPVVVG 489
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NCTGFAVNR FFPY+Q+ LLV G DV++ID I FG+P+GPF+
Sbjct: 490 NCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRVITKFGMPMGPFR 535
>gi|356521845|ref|XP_003529561.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Glycine max]
Length = 724
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/526 (61%), Positives = 412/526 (78%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA+IT++NPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MEVGPDGVAVITIVNPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +SVE++ + IE +KP VAA++GLALGGGLE+AM C+AR++ P
Sbjct: 70 SAFGGIQEAKERPKPGWISVEIITDTIEAARKPSVAAIDGLALGGGLEVAMACNARLSTP 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
QLGLPEL LG+IPGFGGTQRLPRLVGL+K +EM+L SK + +E + LGL+D +V+
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKGLEMILASKPVKGKEAFSLGLVDGLVSPN 189
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+L+ +R WALD+ R+PWI SL++T+KL L EARE+LK AR QA+K APN+ C
Sbjct: 190 DLVNTARQWALDMLGHRRPWIASLYKTEKLEPLGEAREILKFARAQARKRAPNLQHPLVC 249
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+DVIE GIV G +G+ KEA+ F+ LV DT + LVHVFFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKSLVHVFFAQRGTSKVPGVTDCGLAPRQ 309
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GKLT++
Sbjct: 310 VKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLDAGINRIKANLQSRVKKGKLTKE 369
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ +LKG LDY F+DVD+VIEAVIE++ LKQ+IFS+LEK CPPHCILA+NTSTID
Sbjct: 370 NFEKTISLLKGSLDYESFRDVDLVIEAVIENISLKQQIFSDLEKYCPPHCILASNTSTID 429
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
LN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT++TS QVI+D++ + K IKK PVVVG
Sbjct: 430 LNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTKQTSPQVIVDVLDISKKIKKTPVVVG 489
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NCTGFAVNR FFPY+Q+ LLV G DV++ID I FG+P+GPF+
Sbjct: 490 NCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRIITKFGMPMGPFR 535
>gi|224130412|ref|XP_002328602.1| predicted protein [Populus trichocarpa]
gi|222838584|gb|EEE76949.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/528 (62%), Positives = 412/528 (78%), Gaps = 1/528 (0%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T+EVG DGVA+ITLINPPVNAL+ ++ LKD +E+A RDDVKAIV+TG G+FSGG D
Sbjct: 11 TIEVGADGVALITLINPPVNALSSDVLNSLKDSYEQALRRDDVKAIVITGAKGKFSGGAD 70
Query: 67 INVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
I+ F++V PD + E++ + +E KKP VAA++GLALGGGLE+AM CHARI+
Sbjct: 71 ISSFEEVQEGKVNEPKPDFIFSEVLGDTLEAAKKPSVAAIDGLALGGGLEVAMACHARIS 130
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P QL LPEL LG+IPGFGGTQRLPRLVG++KA+EMML SK + EE LGL+DAVV+
Sbjct: 131 TPTAQLSLPELQLGLIPGFGGTQRLPRLVGITKALEMMLTSKPVKGEEAHALGLVDAVVS 190
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
EL+ +R WALDI R+PWI SL++T+KL SL EARE+ K AR QA+K APN+
Sbjct: 191 PNELVSTARQWALDIFECRRPWIASLYKTEKLDSLGEAREIFKFARAQAQKRAPNLLHPI 250
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
C++V+E GIV G +G+ KE + F+ELV D S+ LVH+FFA T+KVP +TD+G P
Sbjct: 251 VCINVVEHGIVSGPRAGLYKEFESFQELVRSDISKSLVHIFFALHGTTKVPGITDLGFVP 310
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R V+KVAV+GGGLMGSGIATA IL+N V+LKEVN ++L GI + AN++ V +GK+T
Sbjct: 311 RLVKKVAVLGGGLMGSGIATALILSNYPVILKEVNDQFLQAGIGRVRANLQSRVKKGKMT 370
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
Q+K + +LKG LDY FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHCILA+NTST
Sbjct: 371 QEKFEKTMSLLKGSLDYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCILASNTST 430
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT++TS QVI+DL+ VGK I+K PVV
Sbjct: 431 IDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRTKQTSPQVIVDLLDVGKKIRKTPVV 490
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNCTGFAVNR FFPY+Q+A LV GVD+++ID I FG+P+GPF+
Sbjct: 491 VGNCTGFAVNRMFFPYTQAAIFLVEHGVDLYQIDRVISKFGMPMGPFR 538
>gi|356564184|ref|XP_003550336.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2-like [Glycine max]
Length = 722
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/529 (60%), Positives = 411/529 (77%), Gaps = 7/529 (1%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVAIIT++NPPVN+L+ ++ K+ F++A RDDVKAIV+TG GRFSGGFDI
Sbjct: 10 MEVGPDGVAIITIVNPPVNSLSYDVLRSFKENFDQALQRDDVKAIVVTGAKGRFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
+ F GA P +SVE++ + IE +KP+VAA++GLALGGGLE AM C+AR+
Sbjct: 70 SAF----GAQKPEERPKPGWLSVEIITDTIEAARKPLVAAIDGLALGGGLEFAMACNARL 125
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+ P +LGLPEL LG+IPG GGTQRLPRLVGL+KA+EMML SK + +E + LGL+D ++
Sbjct: 126 STPTAKLGLPELQLGIIPGLGGTQRLPRLVGLTKALEMMLTSKPVKGKEAFSLGLVDGLM 185
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ ++L+ + WALDI RR+PWI SL++TDKL L EARE+LK AR Q +K APN+
Sbjct: 186 SPDDLVNTACQWALDIMGRRRPWIASLYKTDKLEPLGEAREILKFARAQVQKRAPNLQHP 245
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+DVIE G+V G +G+ KE + + L+ DTS+ L+HVFF+QR TSKVP VTD GL
Sbjct: 246 LVCIDVIEAGVVAGPRAGLWKEVEASEGLIKSDTSKSLIHVFFSQRGTSKVPGVTDCGLV 305
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR V+KVA+IGGGLMGSGIATA IL++ ++LKEVN ++L GI I+AN++ V +GKL
Sbjct: 306 PRHVKKVAIIGGGLMGSGIATALILSSYPIILKEVNEKFLEAGINRIKANLQSRVKKGKL 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
TQ+ N + +LKG LDY FKDVDMVIEAV+E+V LKQ+IF++LEK CPPHCILA+NTS
Sbjct: 366 TQENFENTVSLLKGTLDYESFKDVDMVIEAVVENVSLKQQIFADLEKYCPPHCILASNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN++GE+T SQDRI+GAHFFSPAHVMPLLEIVRT++TSAQV++D++ + K IKK PV
Sbjct: 426 TIDLNLIGERTKSQDRIVGAHFFSPAHVMPLLEIVRTKQTSAQVVVDVLDISKKIKKTPV 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q+ LV G DV++ID I FG+P+GPF+
Sbjct: 486 VVGNCTGFAVNRMFFPYTQAGLFLVEHGADVYQIDRVITKFGMPMGPFR 534
>gi|357478819|ref|XP_003609695.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
gi|355510750|gb|AES91892.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
Length = 724
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/527 (60%), Positives = 409/527 (77%), Gaps = 1/527 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
M VG DGVAIIT+INPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MNVGADGVAIITIINPPVNSLSFDVLQSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +S+E++ + IE KKP VAA++GLALGGGLE+AM C+AR++
Sbjct: 70 SAFGGLQEAKERPKPGWISIEIITDTIEAAKKPSVAAIDGLALGGGLEVAMACNARLSTA 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
QLGLPEL LG+IPGFGGTQRLPRLVGL+KA+EMML SK + ++ + GL+D +V+ +
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKALEMMLTSKPVKGKDAFSSGLVDGLVSPD 189
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+L+ +R WALDI RR+PWI SL++T+K+ L EARE+LK AR QA+K APN+ C
Sbjct: 190 QLVNTARQWALDILDRRRPWIASLYKTEKIEPLGEAREILKFARAQARKQAPNLKHPLVC 249
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+DVIE GIV G +G+ KEA+ F LV DT + L+H+FFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKSLIHIFFAQRGTSKVPGVTDRGLVPRP 309
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +G LTQ+
Sbjct: 310 VKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKANLQSRVKKGNLTQE 369
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ A ++KG LDY F+DVDMVIEAVIE+V LKQ+IF++LEK CPPHCIL +NTSTID
Sbjct: 370 RFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILGSNTSTID 429
Query: 428 LNIVGEKTSSQDRIIGAHFF-SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
L+++GEKT SQDRIIGAHFF PAHVMPLLEIVRT+RTS QVI+DL+ + K IKK PVVV
Sbjct: 430 LDLIGEKTKSQDRIIGAHFFRCPAHVMPLLEIVRTKRTSPQVIVDLLDISKKIKKTPVVV 489
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GNCTGFAVNR FFPY+Q+ LLV G DV++ID A+ FG+P+GP +
Sbjct: 490 GNCTGFAVNRVFFPYTQATLLLVERGADVYQIDKAVTKFGMPMGPLR 536
>gi|34922417|sp|O49809.2|MFPA_BRANA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|2832898|emb|CAA04386.1| Tetrafunctional protein of glyoxysomal fatty acid beta-oxidation
[Brassica napus]
Length = 725
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/529 (62%), Positives = 417/529 (78%), Gaps = 1/529 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+EVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG G+FSGGF
Sbjct: 9 TTIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAKGKFSGGF 68
Query: 66 DINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F ++ G + +S++++ +L+E KKP VAA++GLALGGGLEL+M CHARI
Sbjct: 69 DISGFGEIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAIDGLALGGGLELSMACHARI 128
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAVV
Sbjct: 129 SAPGAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVV 188
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
ELL +R WALDIA RRKPW+ S+ +TDKL L EARE+LK A+ Q ++ APNM
Sbjct: 189 PPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHP 248
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
CL+ +E GIV G +G+ KEA+V E++ LDT++GL+HVFF+QR T+KVP VTD GL
Sbjct: 249 LMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLV 308
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+
Sbjct: 309 PRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKM 368
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+++K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NTS
Sbjct: 369 SKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT TSAQVI+DL+ VGK I+K PV
Sbjct: 429 TIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVDLLDVGKKIRKTPV 488
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q+A LV G D + ID A+ FG+P+GPF+
Sbjct: 489 VVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKAVSKFGMPMGPFR 537
>gi|15231317|ref|NP_187342.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75267758|sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2; Short=AtMPF2; Includes: RecName:
Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|295982056|pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
gi|6728993|gb|AAF26990.1|AC016827_1 fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|4337027|gb|AAD18042.1| MFP2 [Arabidopsis thaliana]
gi|17065090|gb|AAL32699.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|332640947|gb|AEE74468.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 725
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/532 (62%), Positives = 416/532 (78%), Gaps = 5/532 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFR 537
>gi|297829230|ref|XP_002882497.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
gi|297328337|gb|EFH58756.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
Length = 723
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/530 (63%), Positives = 414/530 (78%), Gaps = 3/530 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRIDVKAIVITG--GRFSGG 65
Query: 65 FDINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F ++ G +S++++ +L+E +KP VAA++GLALGGGLELAM CHAR
Sbjct: 66 FDISGFGEMQKGTIKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHAR 125
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
I+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAV
Sbjct: 126 ISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAV 185
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ ELL +R WALDI RRKPW+ S+ +TDKL SL EARE+LK AR Q +K APNM
Sbjct: 186 MPPAELLTTARRWALDIVERRKPWVSSVSKTDKLPSLGEAREILKFARGQTQKRAPNMKH 245
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
CLD IE GIV G +G+ KEA+V ++V LDT++ L+HVFF+QR T+KVP VTD GL
Sbjct: 246 PLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKSLIHVFFSQRGTAKVPGVTDRGL 305
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +G
Sbjct: 306 APRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGS 365
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NT
Sbjct: 366 MSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNT 425
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK P
Sbjct: 426 STIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTP 485
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+
Sbjct: 486 VVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFR 535
>gi|357135448|ref|XP_003569321.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 748
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/528 (59%), Positives = 407/528 (77%), Gaps = 5/528 (0%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
TMEV DGVA+IT+ NPPVNAL+ ++A + ++EA R+DVKAIVLTG GRF GGFD
Sbjct: 37 TMEVRGDGVAVITISNPPVNALSFDVLASFQRNYQEALRRNDVKAIVLTGAEGRFCGGFD 96
Query: 67 INVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
IN F G + P +S++ + +++ED KP VAA++G+ALGGGLE+AM CHARI+
Sbjct: 97 INAF----GNKPKNEKPGSLSIDFLTDIVEDAHKPSVAAIDGIALGGGLEVAMVCHARIS 152
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P QLGLPEL LG+IPG GGTQRLPRLVG+SKA+EMML+SKSI E KLGL+DA+V+
Sbjct: 153 TPSAQLGLPELQLGIIPGMGGTQRLPRLVGMSKALEMMLMSKSIKGVEAHKLGLVDAIVS 212
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ EL+ + WAL+IA ++PW +SLHRTDKL L EA+E+LK++R++A+K A N+
Sbjct: 213 ANELVNTACSWALEIAEHKRPWFKSLHRTDKLPDLQEAKEILKISRVKAQKQAANLQHPL 272
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
C+DVIE G++ G +G++KE K L TS+ L HVFFAQRATSK+P VT++GL P
Sbjct: 273 VCIDVIEAGVLSGPRAGLMKEVVSGKMLEQSQTSKSLRHVFFAQRATSKIPEVTNLGLTP 332
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + K A++GGGLMGSGIATA +LNN++V+LKEVN ++L GI ++AN++ V RG++T
Sbjct: 333 RRILKAAIVGGGLMGSGIATALVLNNMFVILKEVNEKFLDAGINRVKANLQSFVKRGRMT 392
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+D L +L GVLDY +F+D D+VIEAVIE + LKQKIFS+LE+ C +CI+ATNTST
Sbjct: 393 KDDYEKKLSLLSGVLDYEQFRDADVVIEAVIEDILLKQKIFSDLERYCHSNCIIATNTST 452
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDL ++G+KTS QDRIIGAHFFSPAHVMPLLEIVRT+ TS+QVI+DL+ + K I+K P+V
Sbjct: 453 IDLQLIGQKTSCQDRIIGAHFFSPAHVMPLLEIVRTQHTSSQVIVDLLDLAKKIRKTPIV 512
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNCTGFAVNR FFPY Q A LLV G+DV+RID I FG+P+GPF+
Sbjct: 513 VGNCTGFAVNRMFFPYGQVAGLLVDYGLDVYRIDHVITQFGMPMGPFR 560
>gi|168025753|ref|XP_001765398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683451|gb|EDQ69861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 722
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/530 (63%), Positives = 421/530 (79%), Gaps = 2/530 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V MEVG DGVA+IT+ NPPVN+LAI ++ GLK+K+ EA RDDVKAIV+TG G+FSGGF
Sbjct: 5 VNMEVGADGVAVITIQNPPVNSLAIDVLLGLKEKYVEAAKRDDVKAIVVTGANGKFSGGF 64
Query: 66 DINVFQKVHGAGDVS--LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K+ G S + VS +L++ IE+ KP VAAV GLALGGGLEL+M CHAR
Sbjct: 65 DITAFPKIQQGGKCSNGYLSKVSTDLMIETIEEASKPSVAAVAGLALGGGLELSMSCHAR 124
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IA PK QLGLPEL LG+IPGFGGTQRLPRLVGL+KAIEMMLLSK I SEEG +LGLID +
Sbjct: 125 IATPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPIASEEGKQLGLIDEI 184
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
V+ ++LL +R WALDIA+ +KP + SLHRTDKL SL EARE++K AR Q K+TAPN+
Sbjct: 185 VSPKDLLVTARQWALDIASGKKPRLSSLHRTDKLESLGEAREIIKFARAQVKRTAPNLTH 244
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
CLD +EEG++ GGY+G LKEA+ F V+ D ++GLV+VFFAQRAT+KVP + ++GL
Sbjct: 245 PLLCLDAVEEGVIAGGYAGNLKEAEAFAAAVVSDNAKGLVNVFFAQRATTKVPGIAELGL 304
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
KPR ++ VAV+GGGLMGSGI TA +L+ V+LKE+N ++L G+ ++AN++ V +GK
Sbjct: 305 KPRKIQNVAVVGGGLMGSGIVTALVLSGYSVILKEINDKFLQAGLGRVKANLQSRVKKGK 364
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
++Q+K L ++KGVL Y FK VDMVIEAVIE++ LKQ IF +LEK C CILATNT
Sbjct: 365 MSQEKFEKTLSLVKGVLTYDVFKSVDMVIEAVIENIDLKQSIFVDLEKNCKNDCILATNT 424
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDLN+VG KT SQDR+IGAHFFSPAH+MPLLEIVRT++TS Q I+DLM +GK IKK P
Sbjct: 425 STIDLNLVGAKTRSQDRLIGAHFFSPAHIMPLLEIVRTDKTSPQAIVDLMALGKAIKKTP 484
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+VGNCTGFAVNR FFPY+ +A +L LGVD++RID+AI+S+G+P+GPF+
Sbjct: 485 VLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKSWGMPMGPFR 534
>gi|168042293|ref|XP_001773623.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675011|gb|EDQ61511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 732
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/540 (60%), Positives = 420/540 (77%), Gaps = 12/540 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V M+VG D VA+IT+ NPPVN+LAIP + LK+++ EA +RDDVKAIV+TG G+FSGGF
Sbjct: 5 VKMDVGADAVAVITIDNPPVNSLAIPALIALKERYNEANARDDVKAIVVTGANGKFSGGF 64
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+VF K+ G + SV+L++ IE+ KP VAAV GLALGGGLELAM CHARIA
Sbjct: 65 DISVFPKLQEGGSNGYLNQASVDLMIETIEEASKPTVAAVPGLALGGGLELAMSCHARIA 124
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML------------LSKSITSEE 173
PK QLGLPEL LG++PGFGGTQRLPRLVGL+KA+EMML LSK I SEE
Sbjct: 125 TPKAQLGLPELQLGILPGFGGTQRLPRLVGLTKALEMMLAICVGCQPNGLQLSKPIASEE 184
Query: 174 GWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ 233
G KLGL+D +V E+LL ++R WALDIA ++P + SL RTDKL SL +ARE++K AR Q
Sbjct: 185 GKKLGLVDEIVAPEDLLTIARRWALDIALGKRPRLSSLQRTDKLESLGDAREIIKFARAQ 244
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KKTAPN+ CLD +EEG+V GGY G LKEA++F V+ D ++GLV++FFA RATS
Sbjct: 245 VKKTAPNLTHPLLCLDAVEEGVVAGGYRGALKEAELFAATVVSDNAKGLVNLFFAIRATS 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 353
KVP + ++GLKPR ++KVAV+GGGLMGSGI TA IL+ V+LKE+N ++L G++ I+A
Sbjct: 305 KVPGIVELGLKPRKIKKVAVVGGGLMGSGIVTALILSGYSVLLKEINDKFLQAGLERIKA 364
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
N++ V +GK++++K L ++ GVL Y +FK VD+VIEAVIE++ LKQ IF +LEK C
Sbjct: 365 NLQSRVKKGKMSREKFETILSLVTGVLTYEDFKSVDVVIEAVIENIDLKQSIFVDLEKNC 424
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
CIL+TNTSTIDLN++G KT SQDRIIGAHFFSPAH+MPLLEIVRT++TS QVI+DLM
Sbjct: 425 RTDCILSTNTSTIDLNVLGAKTRSQDRIIGAHFFSPAHIMPLLEIVRTDKTSPQVIVDLM 484
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+GK IKK V+VGNCTGFAVNR FFPY+ +A +L LGVD++RID+AI+S+G+P+GPF+
Sbjct: 485 ALGKAIKKTTVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKSWGMPMGPFR 544
>gi|115436430|ref|NP_001042973.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|15290204|dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|21104813|dbj|BAB93398.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|113532504|dbj|BAF04887.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|125570288|gb|EAZ11803.1| hypothetical protein OsJ_01677 [Oryza sativa Japonica Group]
gi|215713473|dbj|BAG94610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218188166|gb|EEC70593.1| hypothetical protein OsI_01815 [Oryza sativa Indica Group]
Length = 727
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/532 (62%), Positives = 421/532 (79%), Gaps = 5/532 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEVG DGVA+IT+ NPPVN+L+I ++ LK+ + EA R+DVKAIV+TG GG+FSGG
Sbjct: 10 RTEMEVGADGVAVITICNPPVNSLSIDVLLSLKENYAEALRRNDVKAIVVTGKGGKFSGG 69
Query: 65 FDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F V G G V P V S++++ + +E KP VAA++GLALGGGLE+AM CH
Sbjct: 70 FDISSFGSVQG-GKVE-QPKVGYISIDIITDTLEAATKPSVAAIDGLALGGGLEVAMACH 127
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+ P QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EMMLLSK I E +LGL+D
Sbjct: 128 ARISTPTAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
++V++++L+ +R WALDI ++PWI+SL++TDKL L EARE+LK AR QA++ A N+
Sbjct: 188 SLVSADDLVNTARRWALDICELKRPWIKSLYKTDKLEPLGEAREILKFARAQARRQAANL 247
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
C+DVIEEGIV G +G+ KEA F+ L+ DT + LVHVFF+QRATSKVP TD+
Sbjct: 248 EHPLVCIDVIEEGIVSGPRAGLWKEANAFQGLLFADTCKNLVHVFFSQRATSKVPGATDL 307
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR V KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +
Sbjct: 308 GLMPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRK 367
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
GK+T+++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HC+LAT
Sbjct: 368 GKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLAT 427
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTSTIDLN++GEKT S+DRI+GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK IKK
Sbjct: 428 NTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKK 487
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
P+VVGNCTGFAVNR FFPY+QSA L V LG+DV++ID A FG+P+GPF+
Sbjct: 488 TPIVVGNCTGFAVNRMFFPYTQSALLFVDLGMDVYKIDRACTKFGMPMGPFR 539
>gi|224033651|gb|ACN35901.1| unknown [Zea mays]
gi|413948034|gb|AFW80683.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/537 (61%), Positives = 422/537 (78%), Gaps = 6/537 (1%)
Query: 1 MAAP-RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA R ++VG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R+DVKAIV+TG GG
Sbjct: 1 MAAKVRTELDVGADGVAVITIYNPPVNSLSIDVLHSLKESYEEALRRNDVKAIVVTGKGG 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLEL 116
+FSGGFDI+ F V G ++ P V +++++ + +E KP VAA++GLALGGGLE+
Sbjct: 61 KFSGGFDISSFGGVQGGQ--TMQPKVGYIAIDILTDTVEAATKPSVAAIDGLALGGGLEV 118
Query: 117 AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
AM CHARIA P QLGLPEL LG+IPGFGGTQRLPRLVGL+K++EMMLLSK I E +
Sbjct: 119 AMACHARIATPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGGEAHQ 178
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236
LGL+DA+V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K
Sbjct: 179 LGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLGEAREILKFARAQAQK 238
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
A N+ C+DVIEEGIV G +G+ KEA F+EL+ DT + LVHVFF+QRATSK+P
Sbjct: 239 QAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKSLVHVFFSQRATSKIP 298
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
TD+GL PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI I+AN++
Sbjct: 299 GATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQ 358
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V +GK+T+++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP H
Sbjct: 359 SRVKKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSH 418
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
CILATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VG
Sbjct: 419 CILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVG 478
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K IKK P+VVGNCTGFAVNR FFPY+QSA V LG+DV++ID A FG+P+GPF+
Sbjct: 479 KKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFR 535
>gi|226506006|ref|NP_001152306.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
gi|195654913|gb|ACG46924.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/535 (61%), Positives = 419/535 (78%), Gaps = 5/535 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R ++VG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R+DVKAIV+TG GG+F
Sbjct: 3 AKGRTELDVGADGVAVITIYNPPVNSLSIDVLHSLKESYEEALRRNDVKAIVVTGKGGKF 62
Query: 62 SGGFDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
SGGFDI+ F V G ++ P V +++++ + +E KP VAA++GLALGGGLE+AM
Sbjct: 63 SGGFDISSFGGVQGGQ--TMQPKVGYIAIDILTDTVEAATKPSVAAIDGLALGGGLEVAM 120
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
CHARIA P QLGLPEL LG+IPGFGGTQRLPRLVGL+K++EMMLLSK I E +LG
Sbjct: 121 ACHARIATPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGGEAHQLG 180
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
L+DA+V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K A
Sbjct: 181 LVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLGEAREILKFARAQAQKQA 240
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
N+ C+DVIEEGIV G +G+ KEA F+EL+ DT + LVHVFF+QRATSK+P
Sbjct: 241 ANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKSLVHVFFSQRATSKIPGA 300
Query: 299 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
TD+GL PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI I+AN++
Sbjct: 301 TDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSR 360
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V +GK+T ++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HCI
Sbjct: 361 VRKGKMTDERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCI 420
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK
Sbjct: 421 LATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKK 480
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
IKK P+VVGNCTGFAVNR FFPY+QSA V LG+DV++ID A FG+P+GPF+
Sbjct: 481 IKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFR 535
>gi|54291849|gb|AAV32217.1| putative fatty acid beta-oxidation multifunctional protein [Oryza
sativa Japonica Group]
Length = 668
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/530 (60%), Positives = 401/530 (75%), Gaps = 1/530 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEV GVA+IT+ NPPVNAL+I ++ LKD +EEA R+DVKAIV+TG GG FSGG
Sbjct: 6 RTEMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGG 65
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DIN F + L D VS++++ N +E KP VAA+ G ALGGGLE++M C AR
Sbjct: 66 LDINTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQAR 125
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
I+ P QLGLPEL LGVIP FGGTQRLPRLVGL+KA+EMML+SK I +EE +L LIDA+
Sbjct: 126 ISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAI 185
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
V+ +LL + WALDI+ R+PW+ +L RTDKL S EARE+LK AR Q +K A N+
Sbjct: 186 VSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPDEAREILKFARAQVQKQAANLRH 245
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
C+DVIEEGIV G +G+ KEA F++LV DT + LVHVFF+QRATSKVP +TD+GL
Sbjct: 246 PLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKSLVHVFFSQRATSKVPGITDLGL 305
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR V KVA++GGGLMGSGIATA +L+N VVLKEVN ++L GI I+AN++ V GK
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+T++ L +L GV+DY FKDVD+VIE ++E+V +KQ++F++LE+ CP HC+LATNT
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKVKQQVFADLERYCPSHCVLATNT 425
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+ TS QV++DL+ VGK IKK P
Sbjct: 426 STIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTP 485
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGFAVNR F PY+ A LLV G+DV++ID FG+P+GPF+
Sbjct: 486 VVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFR 535
>gi|115462175|ref|NP_001054687.1| Os05g0155000 [Oryza sativa Japonica Group]
gi|113578238|dbj|BAF16601.1| Os05g0155000 [Oryza sativa Japonica Group]
Length = 724
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/530 (60%), Positives = 401/530 (75%), Gaps = 1/530 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEV GVA+IT+ NPPVNAL+I ++ LKD +EEA R+DVKAIV+TG GG FSGG
Sbjct: 6 RTEMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGG 65
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DIN F + L D VS++++ N +E KP VAA+ G ALGGGLE++M C AR
Sbjct: 66 LDINTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQAR 125
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
I+ P QLGLPEL LGVIP FGGTQRLPRLVGL+KA+EMML+SK I +EE +L LIDA+
Sbjct: 126 ISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAI 185
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
V+ +LL + WALDI+ R+PW+ +L RTDKL S EARE+LK AR Q +K A N+
Sbjct: 186 VSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPDEAREILKFARAQVQKQAANLRH 245
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
C+DVIEEGIV G +G+ KEA F++LV DT + LVHVFF+QRATSKVP +TD+GL
Sbjct: 246 PLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKSLVHVFFSQRATSKVPGITDLGL 305
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR V KVA++GGGLMGSGIATA +L+N VVLKEVN ++L GI I+AN++ V GK
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+T++ L +L GV+DY FKDVD+VIE ++E+V +KQ++F++LE+ CP HC+LATNT
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKVKQQVFADLERYCPSHCVLATNT 425
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+ TS QV++DL+ VGK IKK P
Sbjct: 426 STIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTP 485
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGFAVNR F PY+ A LLV G+DV++ID FG+P+GPF+
Sbjct: 486 VVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFR 535
>gi|357158051|ref|XP_003578000.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 723
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/533 (61%), Positives = 417/533 (78%), Gaps = 1/533 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R DVKAIV+TG GG+F
Sbjct: 3 AKGRTEMEVGADGVAVITICNPPVNSLSIDVLLSLKESYEEALQRKDVKAIVVTGKGGKF 62
Query: 62 SGGFDINVFQKVHGAG-DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G + + +S++++ ++E KP VAA++GLALGGGLE+AM C
Sbjct: 63 SGGFDITSFGDLQGGKMEQPKVGYISIDILTEILEGATKPSVAAIDGLALGGGLEVAMAC 122
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGL+K++EM+LLSK I EE ++ GL+
Sbjct: 123 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMILLSKPIKGEEAYQQGLV 182
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D++V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K A N
Sbjct: 183 DSLVSPNDLVNAARRWALDICELRRPWIKSLYKTDKLEPLGEAREILKFARAQARKQAAN 242
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVIEEGIV G +G+ KEA F+ L+ DT + LVHVFF+QRATSKVP TD
Sbjct: 243 LEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKSLVHVFFSQRATSKVPGATD 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V
Sbjct: 303 LGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVR 362
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GK+T+++ AL ++ G L Y FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILA
Sbjct: 363 KGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILA 422
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IK
Sbjct: 423 TNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIK 482
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A FG+P+GPF+
Sbjct: 483 KTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMGPFR 535
>gi|326499728|dbj|BAJ86175.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 761
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/535 (61%), Positives = 420/535 (78%), Gaps = 2/535 (0%)
Query: 1 MAAPRVT-MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA T MEVG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R DVKAIV+TG GG
Sbjct: 38 MAAKGTTEMEVGGDGVAVITICNPPVNSLSIDVLLSLKESYEEALQRKDVKAIVVTGKGG 97
Query: 60 RFSGGFDINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
+FSGGFDI+ F +H G + + +S++++ L+E KP VAA++GL LGGGLE++M
Sbjct: 98 KFSGGFDISSFGDLHSGKIEQPKVGYISIDILTELLEGATKPSVAAIDGLCLGGGLEVSM 157
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
CHARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGL+K++EMMLLSK I EE +LG
Sbjct: 158 ACHARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGEEAHQLG 217
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
L+DA+V+ +L+ +R ALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A
Sbjct: 218 LVDALVSPNDLVNTARRLALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQA 277
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
N+ C+DVIEEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP
Sbjct: 278 ANLEHPLICIDVIEEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGA 337
Query: 299 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
TD+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++
Sbjct: 338 TDLGLMPRKIMKVAILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSR 397
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V +GK+T+++ AL +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCI
Sbjct: 398 VRKGKMTEERYEKALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCI 457
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK
Sbjct: 458 LATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKR 517
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
IKK P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A FG+P+GPF+
Sbjct: 518 IKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGLDVYKIDRACTKFGMPMGPFR 572
>gi|218196641|gb|EEC79068.1| hypothetical protein OsI_19644 [Oryza sativa Indica Group]
Length = 718
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/533 (57%), Positives = 403/533 (75%), Gaps = 3/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLELAM C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR++ QLGLPEL LG+IPG GGTQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSVQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN+++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISN 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K I+
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIR 477
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFR 530
>gi|242087635|ref|XP_002439650.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
gi|241944935|gb|EES18080.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
Length = 718
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/533 (59%), Positives = 397/533 (74%), Gaps = 3/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+ NPPVNAL++ ++A L+ + EA SR+D+KAIVLTG GR
Sbjct: 1 MARGTTTMEVRADGVAVITISNPPVNALSLDVIASLQRNYTEALSRNDIKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F GGFDI+ F K M S++ + +++ED KP VAA++G+ALGGGLELAM C
Sbjct: 61 FCGGFDISAFGKKPKNEKPGSM---SIDFLTDIVEDAHKPSVAAIDGIALGGGLELAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPG GGTQRLPRLVGL KAIEMML+SK+I +LGL+
Sbjct: 118 HARISTPSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKAIEMMLMSKTIKGMGAQELGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAV ++ EL+ + WAL+I ++KPW RSLHRTDKL L+E ++VLK AR+QAK N
Sbjct: 178 DAVTSANELVNAACSWALEIVEKKKPWFRSLHRTDKLPDLAEVKDVLKFARVQAKMKGAN 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVIEEGIV G +G++KE K L TS+ L H FFAQRATSK+PN+T+
Sbjct: 238 VQHPIVCIDVIEEGIVSGPRAGLMKETLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITN 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL R ++K A+IGGGLMGSGIAT ILNN VVLKEVN E+L GI I+AN++ V
Sbjct: 298 MGLTARKIKKAAIIGGGLMGSGIATILILNNFSVVLKEVNEEFLSTGINRIKANLQSFVK 357
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G+L + L +L GVLDY +F+D D+VIEAVIE + LKQ+IFS+LEK C +CI A
Sbjct: 358 KGQLAIEDYKKKLSLLCGVLDYEQFRDTDVVIEAVIEDMFLKQQIFSDLEKYCHHNCIFA 417
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLNI+GEKT+SQDRI+GAHFFSPAHVMPLLEIV T TS+QVI+DL+ + K I+
Sbjct: 418 TNTSTIDLNIIGEKTASQDRIVGAHFFSPAHVMPLLEIVCTHHTSSQVIVDLLDLAKKIQ 477
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFPY+Q+A LV G+DV+ D I FG+P+GPF+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPYAQAACFLVDHGLDVYHTDHVITQFGMPMGPFR 530
>gi|222631293|gb|EEE63425.1| hypothetical protein OsJ_18237 [Oryza sativa Japonica Group]
Length = 718
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/533 (56%), Positives = 401/533 (75%), Gaps = 3/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLEL M C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELVMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR++ QLGLPEL LG+IPG GGTQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISI 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K I+
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIR 477
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFR 530
>gi|413945015|gb|AFW77664.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 718
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/533 (57%), Positives = 399/533 (74%), Gaps = 3/533 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+INPPVNAL++ ++A L+ + EA SR+D+KAIVLTG+ GR
Sbjct: 1 MARGITTMEVRADGVAVITIINPPVNALSLDVIASLQRNYAEALSRNDIKAIVLTGSKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F GGFDI F+ M S++ + +++ED KP VAA++G+ALGGGLE+AM C
Sbjct: 61 FCGGFDIAAFENKPKNEKPGSM---SIDFLTDIVEDAHKPSVAAIDGIALGGGLEVAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPG GGTQRLPRLVGL KA+EMML SK+I + +LGL+
Sbjct: 118 HARISTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLPKALEMMLTSKTIKGKMAHELGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAV ++ +L+ + WAL+I ++KPW +SLHRTD+L L E +++LK AR+QA+ A N
Sbjct: 178 DAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLEEVKDILKFARVQAEMKAAN 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVI+EGI+ G +G++KE K L TS+ L H FFAQRATSK+PN+T+
Sbjct: 238 VQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITN 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
IGL R ++K A++GGGLMGSGIAT ILNN VVLKEVN ++L GI I+ N++ LV
Sbjct: 298 IGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNEQFLSAGINRIKVNLQSLVR 357
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G+LT++ L +L G LDY +F+D D+VIEAVIE + LKQ+IFS+LEK C +CI A
Sbjct: 358 KGQLTEEDYEKKLSLLCGALDYEQFRDTDVVIEAVIEDMVLKQQIFSDLEKYCHHNCIFA 417
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDLNI+G+KT+SQDRI+GAHFFSPAHVM LLEIV T TS+QVI+DL+ + K I+
Sbjct: 418 TNTSTIDLNIIGQKTASQDRIVGAHFFSPAHVMSLLEIVCTHHTSSQVIVDLIDLAKKIQ 477
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VVGNCTGFAVNR FFPY+Q+A LV G+DV+ ID I FG+P+GPF+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPYAQAASFLVDYGLDVYHIDHVITQFGMPMGPFR 530
>gi|47777470|gb|AAT38103.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
Length = 724
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/536 (56%), Positives = 402/536 (75%), Gaps = 3/536 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQK--VHGAGDVSLMPDVSVELV-VNLIEDCKKPIVAAVEGLALGGGLELA 117
FSGGFDIN F K +S + +++ +V L+ D KP VAA++G+ALGGGLEL
Sbjct: 61 FSGGFDINAFDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELV 120
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
M CHAR++ QLGLPEL LG+IPG GGTQRLPRLVGL KA+EM+L+SK + E K
Sbjct: 121 MVCHARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKF 180
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237
GL+DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K
Sbjct: 181 GLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQ 240
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+ ++ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN
Sbjct: 241 SASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPN 300
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 357
++ +GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++
Sbjct: 301 ISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQS 360
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
LV RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +C
Sbjct: 361 LVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNC 420
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
ILATNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K
Sbjct: 421 ILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAK 480
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
I+K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+
Sbjct: 481 QIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFR 536
>gi|326494018|dbj|BAJ85471.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 716
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/534 (56%), Positives = 406/534 (76%), Gaps = 5/534 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV +DGVA+IT+ NPPVNAL+ ++A L+ +EEA R+DVKAIVLTG GR
Sbjct: 1 MARGATTMEVRDDGVAVITISNPPVNALSFDVIASLQRNYEEALRRNDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
FSGGFDIN F G + P S++ + ++ED +KP VAA++G+ALGGGLELAM
Sbjct: 61 FSGGFDINGF----GNKPKNEKPGSFSIDFLTGVVEDAQKPSVAAIDGVALGGGLELAMV 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
CHAR++ P QLGLPEL LG+IPG GGTQRLPRLVGL KA+EMML+SKSI E K GL
Sbjct: 117 CHARVSTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLKKALEMMLMSKSIKGVEAHKFGL 176
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
+D++V++++L+ + AL+I ++PW++SL RTD+L + EA+++LK AR +A K A
Sbjct: 177 VDSIVSADKLVSTACSCALEILEHKRPWLKSLLRTDRLTDIMEAKKILKFARAEALKQAA 236
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N+ C+DVIEEGI+ G + ++KE K L TS+ L HVFFAQRATSK+PN+
Sbjct: 237 NLQHPLVCIDVIEEGILFGPRAALMKEVLSGKMLEQSQTSKSLRHVFFAQRATSKIPNII 296
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++GL PR + K A++GGGLMGSGIATA IL++I VVLKEVN ++L GI I+AN++ V
Sbjct: 297 NLGLTPRRILKAAIVGGGLMGSGIATAFILSDIVVVLKEVNEKFLNTGINRIKANLQSFV 356
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G++ ++ + L +L GVLDY +F+D D+VIEAVIE + LKQ+IFS+LE++C +CI
Sbjct: 357 KKGRMAKEDYDKKLSLLSGVLDYEQFRDADVVIEAVIEDISLKQQIFSDLERSCHSNCIF 416
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTSTIDL ++G++T+ QDRI+GAHFFSPAHVMPLLEIVRT++TS+QVI+DL+ V K I
Sbjct: 417 ATNTSTIDLQLIGQQTACQDRIVGAHFFSPAHVMPLLEIVRTQQTSSQVIVDLLDVAKKI 476
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+K P+VVG+CTGFAVNR FFPY Q+A LLV+ G+DV+ ID I FG+P+GPF+
Sbjct: 477 RKTPIVVGSCTGFAVNRMFFPYGQAAGLLVNYGLDVYHIDHVIAKFGMPMGPFR 530
>gi|222625457|gb|EEE59589.1| hypothetical protein OsJ_11897 [Oryza sativa Japonica Group]
Length = 710
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 301/503 (59%), Positives = 381/503 (75%), Gaps = 1/503 (0%)
Query: 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD-VSVELV 90
++ LKD +EEA R+DVKAIV+TG GG FSGG DIN F + L D VS++++
Sbjct: 19 VLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLDINTFGAIQRNKAEQLKVDYVSIDVM 78
Query: 91 VNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRL 150
N +E KP VAA+ G ALGGGLE++M C ARI+ P QLGLPEL LGVIP FGGTQRL
Sbjct: 79 TNTLEAAGKPSVAAINGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIPAFGGTQRL 138
Query: 151 PRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRS 210
PRLVGL+KA+EMML+SK I +EE +L LIDA+V+ +LL + WALDI+ R+PW+ +
Sbjct: 139 PRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHT 198
Query: 211 LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVF 270
L RTDKL S EARE+LK AR Q +K A N+ C+DVIEEGIV G +G+ KEA F
Sbjct: 199 LSRTDKLESPDEAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAF 258
Query: 271 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 330
++LV DT + LVHVFF+QRATSKVP +TD+GL PR V KVA++GGGLMGSGIATA +L+
Sbjct: 259 QDLVFSDTCKSLVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLS 318
Query: 331 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 390
N VVLKEVN ++L GI I+AN++ V GK+T++ L +L GV+DY FKDVD+
Sbjct: 319 NYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDL 378
Query: 391 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 450
VIE ++E+V +KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQDRI GAHFFSPA
Sbjct: 379 VIEEIVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPA 438
Query: 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 510
HVMPLLEIVR+ TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F PY+ A LLV
Sbjct: 439 HVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVD 498
Query: 511 LGVDVFRIDSAIRSFGLPIGPFQ 533
G+DV++ID FG+P+GPF+
Sbjct: 499 RGMDVYKIDQVCTEFGMPMGPFR 521
>gi|168057325|ref|XP_001780666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667934|gb|EDQ54552.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 726
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 314/534 (58%), Positives = 390/534 (73%), Gaps = 9/534 (1%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIP----IVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
V MEVG DGVA++TL PPVN+L +V+ LK+ EA +R DVKAIV+ G G+F
Sbjct: 5 VHMEVGEDGVALVTLNKPPVNSLDNSGPGSLVSQLKESICEAHARPDVKAIVIRGANGKF 64
Query: 62 SGGFDINVFQKVHGAGDVSLMPD--VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
SGG DI QKV GD + P ++IE KPIVAAVEG ALGGGLELAM
Sbjct: 65 SGGADIGSLQKVKQVGDGTTYPTHVRGSTFFNDIIEGGPKPIVAAVEGFALGGGLELAMA 124
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
CHARIAAPKTQLGLPELTLG+IPG GGT RLPRLVGL KA++MML SK + SEE +LGL
Sbjct: 125 CHARIAAPKTQLGLPELTLGIIPGLGGTARLPRLVGLVKAVDMMLTSKPVMSEEAKQLGL 184
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
+DAVV ++L+ V+R +ALDIA+ R+ W RSL D +G+ E+ ++LK AR +A+K
Sbjct: 185 VDAVVPLQQLVPVARKYALDIASGRQAWRRSLSLIDHIGTPEESSKILKQARARAQKAYR 244
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N+P LD IE+GI+HGG +G LKE + LV T++GL+H+FFAQR+ K+ VT
Sbjct: 245 NVPHPFVMLDCIEKGILHGGVAGTLKEEEESPMLVASPTAKGLIHIFFAQRSAFKIQGVT 304
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D GLKP ++ VAVIGGGLMGSGIATA LNN+ V+LKEVN E+L G+K IEANV
Sbjct: 305 DSGLKPHKMKSVAVIGGGLMGSGIATALALNNVPVILKEVNQEFLQAGLKRIEANVN--- 361
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + +KA L +KG LDY++F DVDMVIEAVIES+PLKQ+IF++LEK C C+L
Sbjct: 362 ARLRSASEKAQKVLSFVKGTLDYADFSDVDMVIEAVIESIPLKQQIFADLEKYCKSTCLL 421
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTSTIDL ++G+KT SQDRIIGAHFFSPAHVMPLLEIVRT TS Q I D++ + K I
Sbjct: 422 ASNTSTIDLGLIGQKTKSQDRIIGAHFFSPAHVMPLLEIVRTHDTSKQAIQDMLALAKTI 481
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KKVPVVV +C GFAVNR FFPY Q+ LLV LG +RID+ +++FG+P+GPF+
Sbjct: 482 KKVPVVVRSCVGFAVNRMFFPYFQAGHLLVHLGTHPYRIDAVVKAFGMPMGPFR 535
>gi|551444|emb|CAA55910.1| protein MFP-b [Cucumis sativus]
Length = 633
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 284/445 (63%), Positives = 358/445 (80%)
Query: 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQ 148
++ ++ E +KP VAA++GLALGGGLE+AM CHARI+ P QLGLPEL LG+IPGFGGTQ
Sbjct: 1 MITDIFEAARKPAVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGIIPGFGGTQ 60
Query: 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI 208
RLPRLVGLSKA+EMML SK I +E LGL+DA+V EEL+ +R WAL+I RR+PW+
Sbjct: 61 RLPRLVGLSKALEMMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWV 120
Query: 209 RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 268
SLHRTDKL SL+EAR++ LAR QAKK PN+ AC+D +E G+V G +G+ KEA+
Sbjct: 121 HSLHRTDKLESLAEARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAE 180
Query: 269 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 328
F+ L+ DT + L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA I
Sbjct: 181 EFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALI 240
Query: 329 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388
L+N +VVLKEVN ++L GI + AN++ V +G +T +K ++ +LKGVL+Y FKDV
Sbjct: 241 LSNYHVVLKEVNDKFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDV 300
Query: 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 448
DMVIEAVIE+V LKQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+ S+DRIIGAHFFS
Sbjct: 301 DMVIEAVIENVSLKQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFS 360
Query: 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 508
PAH+MPLLEIVRT+ T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL
Sbjct: 361 PAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILL 420
Query: 509 VSLGVDVFRIDSAIRSFGLPIGPFQ 533
GVD ++ID AI FG+P+GPF+
Sbjct: 421 AEHGVDPYQIDRAISKFGMPMGPFR 445
>gi|62320284|dbj|BAD94583.1| AIM1 protein [Arabidopsis thaliana]
Length = 399
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/392 (76%), Positives = 351/392 (89%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
APK QLGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEERKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 397
QDKA AL + KGVLDY+EF DVDMVIE ++
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEVCLQ 398
>gi|384245449|gb|EIE18943.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Coccomyxa subellipsoidea C-169]
Length = 732
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 305/545 (55%), Positives = 389/545 (71%), Gaps = 17/545 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M P T+EVG+DGVAIITL NPPVNAL ++ L + EA SR DVKAIV+TG GR
Sbjct: 1 MTNPTATLEVGSDGVAIITLTNPPVNALHPAVLNALFNCLREAHSRQDVKAIVVTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS GFDIN F K G G S + D L+E KP VAAVE +ALGGGLE+AM C
Sbjct: 61 FSAGFDINQFAKSGGGGIDSRINDN----FCALLESGPKPTVAAVETMALGGGLEVAMAC 116
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
+AR+ P T++GLPEL LG++PGFGGTQRLPRLVGL A +MML S I ++ KLGL+
Sbjct: 117 NARLCTPGTKVGLPELQLGILPGFGGTQRLPRLVGLQTAAQMMLTSAPINDKKAAKLGLV 176
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D VV E+LL +R WA +IAA KP SL+RTDKL SL EA +L+ AR + +K AP+
Sbjct: 177 DGVVPKEKLLAAARAWASEIAAGTKPRNFSLYRTDKLESLGEALPILEFARAETQKRAPH 236
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKV-----------FKELVMLDTSRGLVHVFFAQ 289
+ CLD I GI GG +G LK+A++ F + LDT + LVH+FFAQ
Sbjct: 237 LTHPLLCLDAIRVGIEEGGLAG-LKQARICTPNFCAESVAFNKAASLDTHKALVHIFFAQ 295
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349
RAT KV +TD GLKPR ++K+AV+GGGLMGSGIATA L I V++KEVN ++L G+
Sbjct: 296 RATKKVKGITDGGLKPRRIKKIAVLGGGLMGSGIATASALAGIEVIVKEVNQKFLEGGMA 355
Query: 350 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 409
I++N+ V +GK+TQ+ A+ +KG LDY++F VDMVIEAVIE V LKQ+IF++L
Sbjct: 356 RIKSNLASRVKKGKMTQEAADAVFARVKGALDYNDFASVDMVIEAVIEDVGLKQRIFADL 415
Query: 410 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 469
E+ C P IL++NTSTID++++G KT + +RI+GAHFFSPAH+MPLLEIVRT++TS QVI
Sbjct: 416 ERVCRPDAILSSNTSTIDISLIGAKTRAAERIVGAHFFSPAHIMPLLEIVRTDKTSPQVI 475
Query: 470 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS-FGLP 528
LD + G IKK PVVVGNCTGFAVNR FFPY+Q+A LLV +G+D ++ID AI + FG+P
Sbjct: 476 LDTLEYGSAIKKTPVVVGNCTGFAVNRVFFPYTQAACLLVDMGLDPYKIDMAIFAGFGMP 535
Query: 529 IGPFQ 533
+GPF+
Sbjct: 536 MGPFR 540
>gi|307103971|gb|EFN52227.1| hypothetical protein CHLNCDRAFT_59763 [Chlorella variabilis]
Length = 723
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/534 (54%), Positives = 379/534 (70%), Gaps = 5/534 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ P T+ V DG+A++TL+NPPVN+L ++ L + EA +R +VKAIV+TG GR
Sbjct: 1 MSGPHTTLAVTEDGIALVTLVNPPVNSLHPTVLQSLFNHLREAQARQEVKAIVITGANGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSV-ELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F GFDIN F + G G + D + + +LIE KP VAAV+ +ALGGG ELA+
Sbjct: 61 FCAGFDINQFVQSSGGGGI----DAHINDAFCDLIESGPKPTVAAVQTMALGGGCELALA 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
C+AR+ P T GLPEL LG+IPGFGGTQRLPR VGL KA+EMML S I +LGL
Sbjct: 117 CNARVCTPGTSFGLPELQLGIIPGFGGTQRLPRAVGLQKAVEMMLTSTPIKDRAARELGL 176
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
D VV +LL+V++ A DIAA ++ +++L+RTDKL L EA +L+ AR QA K A
Sbjct: 177 ADEVVPPGQLLEVAKRVAFDIAAGKRARVQTLYRTDKLEPLGEALAILQFARSQAAKRAR 236
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
++ CLD I+ GI HGG +G+ KE + F LDT + LVH+FFAQR+T K+ VT
Sbjct: 237 HLMHPLLCLDAIQYGIEHGGRAGLQKEGECFGAAAALDTHKALVHIFFAQRSTKKIRGVT 296
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D GL+PR +++VAV+GGGLMGSGIATA +L + V+LKEVN ++L G+ I++N+ V
Sbjct: 297 DTGLRPRPIKRVAVLGGGLMGSGIATACVLAGVEVLLKEVNQKFLDAGMGRIQSNLASRV 356
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G++T+ A A+ ++G LDYS F VDMVIEA IE V LKQ+IF+ELE++C IL
Sbjct: 357 KKGRMTEQMAQAAMSRVQGALDYSGFGSVDMVIEAAIEDVGLKQEIFAELERSCRKDAIL 416
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTSTI++ +VG KTS DRI+GAHFFSPAHVMPLLEIVRT++TS QVILD + + I
Sbjct: 417 ATNTSTINIELVGAKTSCADRILGAHFFSPAHVMPLLEIVRTDQTSKQVILDTLELSTKI 476
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KK PVVVGNCTGFAVNR FFPY+Q+A +LV +G+D +RID I FG+P+GPF+
Sbjct: 477 KKTPVVVGNCTGFAVNRVFFPYTQAACMLVDMGLDPYRIDKIIAGFGMPMGPFR 530
>gi|222622587|gb|EEE56719.1| hypothetical protein OsJ_06221 [Oryza sativa Japonica Group]
Length = 448
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/424 (70%), Positives = 349/424 (82%), Gaps = 2/424 (0%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK H L T
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKCM--HTTLHTC 421
Query: 423 TSTI 426
I
Sbjct: 422 NKHI 425
>gi|255080968|ref|XP_002504050.1| predicted protein [Micromonas sp. RCC299]
gi|226519317|gb|ACO65308.1| predicted protein [Micromonas sp. RCC299]
Length = 720
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/529 (52%), Positives = 372/529 (70%), Gaps = 3/529 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
ME+ DGVA+I++ NPPVNALAIP++ G++ + + A + V+AIV+TG+ G+FSGGFDI
Sbjct: 1 MEI-RDGVALISMSNPPVNALAIPVLEGIEAQVKAAQADSGVRAIVITGSRGKFSGGFDI 59
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ V M D + ++ +++E KP VAA+E LALGGGLE+AM C+AR+A P
Sbjct: 60 TQLKARTEGKPVRNMSDFN-GVLNSIVEAGPKPTVAAIENLALGGGLEVAMACNARVATP 118
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
K QLGLPEL LGVIPGFGGTQRLPRLVGL KA+EMML SK + +EE KLGL+DA+V ++
Sbjct: 119 KAQLGLPELQLGVIPGFGGTQRLPRLVGLPKALEMMLKSKPVKAEEALKLGLVDAIVPAD 178
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+L+ + A DIA +R P + + KL + A++V AR QAK+ MP
Sbjct: 179 QLIAKATQLAKDIADKRIPRKMASFDSAKLPADEAMAKKVFAGARRQAKRVKHLMPHPWL 238
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
CLD +E G+ G +G+ E F + V +GLVH FFA R+T+ VP VTD+GLKPR
Sbjct: 239 CLDAVETGVTKGSVAGLASEQDAFAKAVSSRACKGLVHFFFASRSTAAVPGVTDVGLKPR 298
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ VAV+GGGLMGSGIATA L+ + V+LKE+N ++L G+ + AN+ V +G++T
Sbjct: 299 ATKCVAVVGGGLMGSGIATACALSGVRVLLKEINQKFLDAGMARVRANLASNVKKGRMTS 358
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
KA+ + L Y +FK+ DMVIEAVIE++ LKQKIF++LE++C CIL+TNTSTI
Sbjct: 359 QKADAIYSLCTPCLTYDKFKEADMVIEAVIENLDLKQKIFADLERSCRSDCILSTNTSTI 418
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D+ V K + +RI+GAHFFSPAHVM L EI+RT+ T QV++D + + K IKK PVVV
Sbjct: 419 DITKVASKMRNPERILGAHFFSPAHVMQLFEIIRTDATPPQVLVDALGLSKQIKKTPVVV 478
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GNCTGFAVNR FFPY+ SA LLV LG+D + ID+AIR+FG+P+GPF+ G
Sbjct: 479 GNCTGFAVNRVFFPYTMSACLLVDLGLDPYAIDNAIRAFGMPMGPFRLG 527
>gi|302766729|ref|XP_002966785.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
gi|300166205|gb|EFJ32812.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
Length = 732
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/549 (50%), Positives = 371/549 (67%), Gaps = 16/549 (2%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A +V +EVG DGVA++ + NPPVN+L+ ++ L +KF EA R DV+AIVLTG +FS
Sbjct: 4 ASKVRLEVGGDGVALLVIDNPPVNSLSAQVMGELAEKFIEAHERADVQAIVLTGANNKFS 63
Query: 63 GGFDINVFQKVHG-------------AGDVSLMPDVSVE---LVVNLIEDCKKPIVAAVE 106
GG DI K G G V + V L+ ++IE KP VAA+
Sbjct: 64 GGADIKSMSKAPGLIYSCFLSIQQPTGGIVGAVRKTEVSGLVLMNDIIEGGSKPAVAAIH 123
Query: 107 GLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLS 166
G ALGGGLELAM CHAR+A+P +LGLPEL LG+IPG GGTQRLPRLVG+ KA+EMM+ S
Sbjct: 124 GFALGGGLELAMACHARVASPDARLGLPELQLGIIPGLGGTQRLPRLVGVGKAVEMMMTS 183
Query: 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 226
K I ++E + GL+DA+ +L++ +R +A IA + P++++L R+DKL L +A +
Sbjct: 184 KMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLHKALHI 243
Query: 227 LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
+ ARL+AKKT ++ CL VIE GI GG G + E K+ + V ++ L+H+F
Sbjct: 244 IANARLRAKKTHKHVEYPFICLAVIEHGIHKGGIEGTIFERKMGVQTVDSLPAKALMHIF 303
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346
A+R KVPNV+D L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ E L
Sbjct: 304 LAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDEERLQA 363
Query: 347 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 406
GI ++AN++ V++G ++Q + AL +L G +DY F+ ++VIEAVIES+PLK+KIF
Sbjct: 364 GINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPLKKKIF 423
Query: 407 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466
EL+ C CILA+NTS+ DLN + + S +DRIIGAHFFSPAHVM LLEIVRT+ TS
Sbjct: 424 GELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRTDSTSH 483
Query: 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
Q I DL+ + K I KVPVVV N GFAVNR FFPY + A LV LGV +RID+ I+ FG
Sbjct: 484 QSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAVIKDFG 543
Query: 527 LPIGPFQEG 535
+PIGPF+ G
Sbjct: 544 MPIGPFRLG 552
>gi|302792393|ref|XP_002977962.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
gi|300153983|gb|EFJ20619.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
Length = 710
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/533 (51%), Positives = 365/533 (68%), Gaps = 6/533 (1%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A +V +EVG DGVA++ + NPPVN+L+ ++ L +KF EA R DV+AIVLTGN S
Sbjct: 4 ASKVRLEVGGDGVALLVIDNPPVNSLSAQVMGELAEKFIEAHERADVQAIVLTGN----S 59
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G + + F H D + + L + + KP VAA+ G ALGGGLELAM CHA
Sbjct: 60 SGMNRSFFS--HFFSDGTFQEPTTTSLFLFCKQGGSKPAVAAIHGFALGGGLELAMACHA 117
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
R+A+P +LGLPEL LG+IPG GGTQRLPRLVG+ KA+EMM+ SK I ++E + GL+DA
Sbjct: 118 RVASPDARLGLPELQLGIIPGLGGTQRLPRLVGVGKAVEMMMTSKMIKAKEAHEAGLVDA 177
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ +L++ +R +A IA + P++++L R+DKL L EA ++ ARL+AKKT ++
Sbjct: 178 ICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLHEALHIIANARLRAKKTHKHVE 237
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
CL VIE GI GG G + E K+ + V ++ L+H+F A+R KVPNV+D
Sbjct: 238 YPFICLAVIEHGIHKGGTEGTIFERKMGVQTVDSLPAKALMHIFLAERTVYKVPNVSDGR 297
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ E L GI ++AN++ V++G
Sbjct: 298 LEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDEERLQAGINRVQANLKSRVSKG 357
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
++Q + AL +L G +DY F+ ++VIEAVIES+PLK+KIF EL+ C CILA+N
Sbjct: 358 SMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPLKKKIFGELDAICSRDCILASN 417
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS+ DLN + + S +DRIIGAHFFSPAHVM LLEIVRT+ TS Q I DL+ + K I KV
Sbjct: 418 TSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRTDSTSNQSICDLLALSKKIGKV 477
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
PVVV N GFAVNR FFPY + A LV LGV +RID+ I+ FG+PIGPF+ G
Sbjct: 478 PVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAVIKDFGMPIGPFRLG 530
>gi|255551799|ref|XP_002516945.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223544033|gb|EEF45559.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 541
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/388 (63%), Positives = 309/388 (79%)
Query: 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 205
GTQRLPRLVG++KA+EMML SK + EE LGL+DA+V+ EL+ +R WALD+ RK
Sbjct: 8 GTQRLPRLVGITKALEMMLTSKPVKGEEAHALGLVDALVSPNELVTTARRWALDMLEGRK 67
Query: 206 PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLK 265
PW+ SL++T+KL SL EARE+ K AR QA+K APN+ C+DV+EEGIV G +G+ K
Sbjct: 68 PWVASLYKTEKLDSLGEAREIFKFARAQARKQAPNLKHPLVCIDVVEEGIVSGPRAGIWK 127
Query: 266 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 325
EA+ F+ LV +T + LVH+FFAQR T+KVP +TD GL PR V KVAV+GGGLMGSGIAT
Sbjct: 128 EAEEFQVLVKSNTCKSLVHIFFAQRGTTKVPGITDKGLIPRRVNKVAVLGGGLMGSGIAT 187
Query: 326 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385
A IL+N V+LKEVN ++L GI + AN++ V +GK++Q+K L +LKGVLDY F
Sbjct: 188 ALILSNYPVILKEVNQQFLDAGINRVRANLQSRVKKGKMSQEKFEKTLSLLKGVLDYESF 247
Query: 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 445
KDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTSTIDLN++G+KT SQDRIIGAH
Sbjct: 248 KDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGQKTRSQDRIIGAH 307
Query: 446 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 505
FFSPAH+MPLLEIVRT +TSAQ I+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A
Sbjct: 308 FFSPAHIMPLLEIVRTNQTSAQAIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAA 367
Query: 506 RLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
LLV G D ++ID AI FG+P+GPF+
Sbjct: 368 ILLVEHGTDPYQIDRAITKFGMPMGPFR 395
>gi|303271069|ref|XP_003054896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462870|gb|EEH60148.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 712
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 284/535 (53%), Positives = 362/535 (67%), Gaps = 18/535 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M P VT+EV N GVA++T+ NPPVNALAI I+ GLK + E A V+AIV+TG+ G+
Sbjct: 1 MGGPAVTLEVAN-GVAVVTMSNPPVNALAIKILEGLKTQVEAAQRDPKVRAIVITGSKGK 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI + V M D + L +++E KP VAA+E LALGGGLE+AM C
Sbjct: 60 FSGGFDITQLKARTEGKPVRNMSDFNATLN-SVVESGAKPTVAAIENLALGGGLEVAMAC 118
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
+AR+A PK QLGLPEL LGVIPGFGGTQRLPRLVGL KA+EMML SK I +EE KLGL+
Sbjct: 119 NARVATPKAQLGLPELQLGVIPGFGGTQRLPRLVGLQKALEMMLKSKPIKAEEALKLGLV 178
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+ + L + + ALDIA +R +EA+++ +AR AK+
Sbjct: 179 DAIAPRDALTQTASKLALDIAEKR----------------AEAKKIFAVARRGAKRVQKL 222
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
MP C+D IE GI G G++ E F + V +GLVH FFA R T+ VP VTD
Sbjct: 223 MPHPMLCIDAIEAGINKGASEGLIVEQDAFAKAVSSAACKGLVHFFFASRGTAAVPGVTD 282
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++ V V+GGGLMGSGIATA ++N + VVLKE+N ++L G+ ++AN+ V
Sbjct: 283 VGLAPRVMKCVGVVGGGLMGSGIATACVMNGVSVVLKEINQKFLDAGMSRVKANLASAVK 342
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G+LTQ KA+ L Y F VDM IEAVIE++ LKQKIFS+LE +C P IL+
Sbjct: 343 KGRLTQQKADAMYANCHPTLSYGAFSKVDMAIEAVIENLGLKQKIFSDLESSCRPDAILS 402
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTID+ V +K + +RI+GAHFFSPAHVM L EI+RT+ T QV++D + + K IK
Sbjct: 403 TNTSTIDITKVAQKMKNPERIVGAHFFSPAHVMQLFEIIRTDITPPQVLVDTLGLSKQIK 462
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K PVVVGNCTGFAVNR FFPY+ SA LL+ LG D + ID+AIR FG+PIGPF+ G
Sbjct: 463 KTPVVVGNCTGFAVNRVFFPYTMSACLLLDLGCDPYAIDNAIRMFGMPIGPFRLG 517
>gi|115463427|ref|NP_001055313.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|54287655|gb|AAV31399.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
gi|113578864|dbj|BAF17227.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|215712327|dbj|BAG94454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 465
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/451 (55%), Positives = 335/451 (74%), Gaps = 3/451 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLEL M C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELVMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HAR++ QLGLPEL LG+IPG GGTQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISI 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 451
TNTSTIDL+++G+KTS QDRI GAHFFSP +
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPCN 448
>gi|145345062|ref|XP_001417042.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577268|gb|ABO95335.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 722
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/524 (51%), Positives = 365/524 (69%), Gaps = 1/524 (0%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVNALA+P++ GL+ ++A + +V+AIV+ G GG+FSGGFDI +
Sbjct: 9 DDGVAVIELNNPPVNALAVPVLEGLERAVKDAQANSNVRAIVIHGAGGKFSGGFDITQLR 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + + D + ++ +E KP VAA+E LALGGGLE+AM C+AR+A P+ QL
Sbjct: 69 KSTQGKPSNDVGDFNA-ILCRYVEGGSKPCVAAIENLALGGGLEVAMSCNARVATPRAQL 127
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPEL LGVIPGFGGTQRLPRLVGL K++EMML SKSI +EE KLGL+D + ++
Sbjct: 128 GLPELQLGVIPGFGGTQRLPRLVGLEKSLEMMLKSKSIKAEEALKLGLVDKIADPSRIVA 187
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A IA+ S++R DKL +LK A +AK+ MP C+D I
Sbjct: 188 EASALAKAIASGSVKRELSMYRKDKLPDPKSTEMILKEASKKAKRVQSVMPHVALCVDAI 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
G+ G G+ +EA+ FK+ V ++GLVH FFAQRAT+ VP +TD+GLKPR ++ V
Sbjct: 248 SVGLAQGPEEGLKREAENFKKAVSSPAAKGLVHFFFAQRATNVVPGITDVGLKPRPMKSV 307
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGGLMGSGIATA +L I VVLKE+ E+L G+ I++N+ +V +G++T+DKA
Sbjct: 308 GVVGGGLMGSGIATACLLAGIQVVLKEIKQEFLDAGVGRIQSNLTSMVRKGRMTEDKARQ 367
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++K L +F+ DMVIEAVIE++PLKQKIF ELE+ C P CIL+TNTSTID+ +
Sbjct: 368 LMSLVKPTLTDQDFRQCDMVIEAVIENLPLKQKIFCELERICKPDCILSTNTSTIDITKI 427
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
K + +RI+GAHFFSPAHVM L EI+RT+ T AQ+++D + + K IKK PVVVGNCTG
Sbjct: 428 AAKMKNPERIVGAHFFSPAHVMQLFEIIRTDATPAQILVDTLGLSKQIKKTPVVVGNCTG 487
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
FAVNR FFPY+ SA +LV +G D + ID AI FG+P+GPF+ G
Sbjct: 488 FAVNRIFFPYTMSATVLVDIGCDPYAIDRAIMMFGMPMGPFRLG 531
>gi|302834984|ref|XP_002949054.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
gi|300265799|gb|EFJ49989.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
Length = 732
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/529 (54%), Positives = 372/529 (70%), Gaps = 8/529 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ GVAIITL PP+NAL ++ L D+ A + V+AIV+TG G F GFDIN FQ
Sbjct: 13 DGGVAIITLNYPPLNALHPLLLRSLFDQLRRAHADPAVRAIVVTGANGNFCAGFDINQFQ 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
AG + + + + ++E KP VAA++G+ALGGGLE+AMGC+AR+A P T+L
Sbjct: 73 N-PSAGAGGGIDNKINDAICEVLEGGAKPTVAAIQGVALGGGLEMAMGCNARVAVPGTKL 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPEL LG+IPGFGGTQRLPRLVGL+KA EMML S I +E G KLGL+DA+ +++LL
Sbjct: 132 GLPELQLGIIPGFGGTQRLPRLVGLAKAAEMMLTSTPIKAEAGLKLGLVDALAPADQLLA 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
++ ALDIA +KP + SL RTDKL L EA VL +AR +A K A + Q CL+ I
Sbjct: 192 AAKSLALDIAEGKKPRMYSLTRTDKLPPLGEALAVLDMARAEASKRARGLRHPQLCLNAI 251
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI-GLKPRGVRK 310
+ GI +GG +G+ E F E LDT + LVH+FFAQR+T KV VTD+ GLKPR +R
Sbjct: 252 QAGIENGGAAGLAAEGAAFAEAASLDTHKALVHIFFAQRSTKKVKGVTDVPGLKPRPIRC 311
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAV+GGGLMGSGIATA +L + V+LKEVN +L G+ I++N++ V +G ++ D A
Sbjct: 312 VAVLGGGLMGSGIATALVLAGVDVILKEVNQNFLDGGMGRIKSNLQSRVKKGAMSADAAT 371
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
AL +KG LDY++F DMVIEAVIE + LKQ+IF++LE+ C P IL+TNTSTID+++
Sbjct: 372 AALARVKGALDYNDFGGADMVIEAVIEDIGLKQRIFADLERVCRPDAILSTNTSTIDIDL 431
Query: 431 VGEK-----TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
VG K S R++GAHFFSPAHVMPLLEIVRT RT AQ +LD + + IKK PVV
Sbjct: 432 VGAKMEDGGAKSASRLLGAHFFSPAHVMPLLEIVRTSRTGAQALLDTLALSTRIKKTPVV 491
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR-SFGLPIGPFQ 533
VGNCTGFAVNR FFPY+ SA LL LG++ +RID+ + FG+P+GPF+
Sbjct: 492 VGNCTGFAVNRVFFPYTMSAVLLADLGMNPYRIDATVAGKFGMPMGPFR 540
>gi|449472443|ref|XP_004153595.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 356
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/356 (63%), Positives = 284/356 (79%)
Query: 147 TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP 206
TQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RRKP
Sbjct: 1 TQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKP 60
Query: 207 WIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 266
WI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+ KE
Sbjct: 61 WIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKE 120
Query: 267 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 326
+ F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA
Sbjct: 121 IEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATA 180
Query: 327 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386
IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY FK
Sbjct: 181 LILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFK 240
Query: 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 446
DVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GAHF
Sbjct: 241 DVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGAHF 300
Query: 447 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 502
FSPAH+MPLLE+VRT RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+
Sbjct: 301 FSPAHIMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRMFFPYT 356
>gi|424513537|emb|CCO66159.1| predicted protein [Bathycoccus prasinos]
Length = 730
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/530 (49%), Positives = 350/530 (66%), Gaps = 9/530 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N VAIITL NPPVNALA+ ++ ++ + A D + AIVL G G FSGGFDI
Sbjct: 13 NQNVAIITLKNPPVNALALSLLRSFRENVQSAQDDDAIDAIVLRGENGIFSGGFDIAHLG 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + D + E++ L+E+ KKP VAA+ LALGGGLE++M C AR+A +L
Sbjct: 73 KTTRGEKTENVSDFN-EILTRLVENGKKPCVAAISNLALGGGLEVSMACAARVATRGAKL 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---- 187
GLPEL LGVIPGFGGTQRLPRLVGL K++EMML SK ITSEEG +LGL+D VV +
Sbjct: 132 GLPELKLGVIPGFGGTQRLPRLVGLEKSLEMMLQSKEITSEEGARLGLVDEVVEDDGKSG 191
Query: 188 ---ELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQ 243
+++ + A IA K SL RTDKL + ++ +A +AKK +P
Sbjct: 192 NDRAVVEAAVRVAKRIANGEKQRQFSLTRTDKLPRDAKQTMGIMAVAEGKAKKIKAVLPH 251
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
C++ ++ G+ G G+ KE+++F++ V ++GLVH FFA RAT+ VP +TD L
Sbjct: 252 ASYCVEAVKVGLEKGSAEGLRKESEMFQKAVKSPAAKGLVHFFFASRATASVPGITDQKL 311
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+P V+ V V+GGGLMGSGIATA +L+ + VVLKE+ E+L GI+ IEAN+ +V +GK
Sbjct: 312 RPSEVKSVGVVGGGLMGSGIATACLLSGMEVVLKEIKPEFLQAGIQRIEANIGSMVKKGK 371
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ +KA + ++G LD +F +VDMVIEAVIE++ LK+KIFS LE P CIL+TNT
Sbjct: 372 MKPEKAKAIVGRVRGTLDDRDFANVDMVIEAVIENLDLKRKIFSTLESIVKPSCILSTNT 431
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
STI + + + +R+IGAHFFSPAHVM L EI+R ++T Q+++D + K IKK P
Sbjct: 432 STISIAKCASEMRNPERLIGAHFFSPAHVMQLFEIIRVDQTPPQILVDTLAFSKKIKKTP 491
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNCTGF VNR FFPY+ SA +LV LG D + ID I FG+P+GPF+
Sbjct: 492 VVVGNCTGFCVNRVFFPYTMSATVLVDLGCDPYAIDRVISMFGMPMGPFR 541
>gi|452820125|gb|EME27172.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Galdieria sulphuraria]
Length = 1153
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/540 (46%), Positives = 351/540 (65%), Gaps = 15/540 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V + V N GVA+I+ NPPVNAL+ P+ L +K ++A R DVKAIVL G G FSGG
Sbjct: 7 VELNVDNQGVALISFSNPPVNALSNPLSQSLFEKLKQAYERPDVKAIVLFGKNGVFSGGA 66
Query: 66 DINVFQKVHGAGDVSLMP-DVSVEL-VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F ++ D P DV V+ + ++E+ KP VAA+ G+A GGGLE+ + C R
Sbjct: 67 DITEFAALY---DPKASPKDVEVKAHIFQMLEEGSKPTVAAINGVAFGGGLEMILCCQER 123
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ + LPEL +G+IPG GGTQRLPR++GL A+ +ML +K + +E KLGL+ A+
Sbjct: 124 VGTKRASFTLPELRIGLIPGLGGTQRLPRVIGLEAALPVMLQTKVLKGQEANKLGLLAAL 183
Query: 184 VT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR--LQAKKTAPN 240
V EELL ++ AL+IA + L RTDKLGS + ++ + AR L K
Sbjct: 184 VDGEEELLATAKKVALEIAQGLRERKNHLKRTDKLGSPEQWNKIEQFARSELSKSKMIKG 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
PQ+Q CL+ I G+ +GG +G+ E + F+ELV T++ L+HVFFA RATSK+ +
Sbjct: 244 QPQYQECLETIMYGVRNGGEAGLQYERRKFRELVSSPTAKSLIHVFFATRATSKLDAIPG 303
Query: 301 IGLKPRGV--RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
+ + +G +K AV+GGGLMGSGIAT+ + I VV+KEV+ ++ IEAN+
Sbjct: 304 VSTEYKGKLPKKCAVVGGGLMGSGIATSILACGIPVVVKEVDEQFAKAARTRIEANLESF 363
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
R KL+Q+ NNA ++L ++ + F+DVD+VIEA IE V LKQ+IF+ L K P C
Sbjct: 364 RKRSKLSQEALNNAKRILTVTTEFDDKFRDVDLVIEAAIEDVRLKQEIFATLGKLVKPDC 423
Query: 418 ILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
ILATNTS+ID++++ K + + R++GAHFFSPAH+M LLEIVR RTSA+VI DL+T
Sbjct: 424 ILATNTSSIDIDLIATACPKATEEGRVVGAHFFSPAHIMQLLEIVRINRTSARVIQDLVT 483
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS-LGVDVFRIDSAIRSFGLPIGPFQ 533
+GK + K P+VVGNC GFAVNR +FP S + +LV+ LG+ +RID FGLP+GPF+
Sbjct: 484 LGKKMGKTPIVVGNCVGFAVNRMYFPQSNVSDILVTYLGLCPYRIDQVAEEFGLPMGPFK 543
>gi|355388877|gb|AER62381.1| hypothetical protein [Pseudoroegneria spicata]
Length = 339
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 271/338 (80%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPIICIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR +RKVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIRKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLTGTLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388899|gb|AER62392.1| hypothetical protein [Henrardia persica]
gi|355388901|gb|AER62393.1| hypothetical protein [Henrardia persica]
Length = 339
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388873|gb|AER62379.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/339 (64%), Positives = 270/339 (79%)
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
++R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVI
Sbjct: 1 IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
EEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
FAVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388897|gb|AER62391.1| hypothetical protein [Eremopyrum triticeum]
Length = 339
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPQAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388891|gb|AER62388.1| hypothetical protein [Australopyrum retrofractum]
Length = 339
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/338 (63%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|224147713|ref|XP_002336529.1| predicted protein [Populus trichocarpa]
gi|222835872|gb|EEE74293.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/265 (86%), Positives = 248/265 (93%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA++TLINPPVNALAIPI+AGLK+KF+EAT R+DVKA+VLTG GGR
Sbjct: 1 MAKPHVTMEVGNDGVAVVTLINPPVNALAIPIIAGLKEKFDEATRRNDVKALVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH GD+SLMPDVSVELVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHATGDISLMPDVSVELVVNTIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL+GLSKAIE+MLLSK I SEEG KLGLI
Sbjct: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLLGLSKAIEIMLLSKPIMSEEGKKLGLI 180
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V S+ELLKVSR WALDI+ RRKPW+RSLHRTDK+GSLSEAREVLK AR QAKK APN
Sbjct: 181 DAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLSEAREVLKAARQQAKKIAPN 240
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLK 265
+PQHQA LDV+EEGI+HGGY+GVLK
Sbjct: 241 VPQHQALLDVMEEGIIHGGYNGVLK 265
>gi|355388881|gb|AER62383.1| hypothetical protein [Taeniatherum caput-medusae]
gi|355388903|gb|AER62394.1| hypothetical protein [Triticum monococcum subsp. aegilopoides]
Length = 339
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388889|gb|AER62387.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/339 (64%), Positives = 270/339 (79%)
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
++R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVI
Sbjct: 1 IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
EEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
FAVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDHGMDVYKIDRACTKFGMPMG 339
>gi|355388869|gb|AER62377.1| hypothetical protein [Aegilops tauschii]
Length = 339
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/338 (63%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGI+ G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388879|gb|AER62382.1| hypothetical protein [Taeniatherum caput-medusae]
Length = 339
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/338 (63%), Positives = 270/338 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRVKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388913|gb|AER62399.1| hypothetical protein [Aegilops speltoides var. ligustica]
Length = 325
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 260/323 (80%)
Query: 196 WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 255
WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGI
Sbjct: 2 WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARSQARKQAANLEHPLVCIDVIEEGI 61
Query: 256 VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 315
+ G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++G
Sbjct: 62 ISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121
Query: 316 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375
GGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181
Query: 376 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 435
+ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 VTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241
Query: 436 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 495
SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 KSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301
Query: 496 RAFFPYSQSARLLVSLGVDVFRI 518
R FFPY+QSA L V G+DV++I
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKI 324
>gi|355388907|gb|AER62396.1| hypothetical protein [Hordeum marinum subsp. marinum]
Length = 337
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/336 (64%), Positives = 269/336 (80%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKCLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
AVNR FFPY+QSA LLV G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLLVDYGMDVYKIDRACTKFGMP 337
>gi|355388919|gb|AER62402.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLBAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388885|gb|AER62385.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388871|gb|AER62378.1| hypothetical protein [Dasypyrum villosum]
Length = 338
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/337 (63%), Positives = 268/337 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EG+V G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGVVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 529
AVNR FFPY+QSA L V G+DV++ID A FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|355388883|gb|AER62384.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLDAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388887|gb|AER62386.1| hypothetical protein [Agropyron mongolicum]
Length = 335
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/335 (64%), Positives = 267/335 (79%)
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAI 120
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|355388905|gb|AER62395.1| hypothetical protein [Hordeum bogdanii]
Length = 338
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/337 (63%), Positives = 269/337 (79%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI +KPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELKKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVA 121
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 529
AVNR FFPY+QSA L V G+DV++ID A FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|17065148|gb|AAL32728.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
Length = 404
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/392 (59%), Positives = 297/392 (75%), Gaps = 5/392 (1%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 393
G ++Q+K + +LKG LDY F+DVDMVIE
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397
>gi|355388923|gb|AER62404.1| hypothetical protein [Secale cereale]
Length = 335
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/335 (64%), Positives = 266/335 (79%)
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIEE 60
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANXFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLXXGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|355388909|gb|AER62397.1| hypothetical protein [Aegilops longissima]
Length = 335
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/335 (63%), Positives = 266/335 (79%)
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|355388893|gb|AER62389.1| hypothetical protein [Australopyrum retrofractum]
Length = 333
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/333 (64%), Positives = 265/333 (79%)
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
VNR FFPY+QSA L V G+DV++ID A FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|355388895|gb|AER62390.1| hypothetical protein [Eremopyrum bonaepartis]
Length = 332
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 265/331 (80%)
Query: 196 WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 255
WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGI
Sbjct: 2 WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGI 61
Query: 256 VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 315
V G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++G
Sbjct: 62 VSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121
Query: 316 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375
GGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181
Query: 376 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 435
L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 LSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241
Query: 436 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 495
+SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 NSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301
Query: 496 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
R FFPY+QSA L V G+DV++ID A FG
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKIDRACTKFG 332
>gi|355388921|gb|AER62403.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 338
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/338 (63%), Positives = 267/338 (78%)
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+R WALDI RKPWI+SL++TD L L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 1 ARRWALDICELRKPWIKSLYKTDXLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIE 60
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 61 EGIVSGPRAGLWKEANAFQXLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIXKVA 120
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 121 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYXKA 180
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L + G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 181 LSLXTGXLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 240
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
EKT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 241 EKTKSQDRIVGAHFFSPAHVMPLLEIVXTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 300
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 338
>gi|355388875|gb|AER62380.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 333
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/333 (63%), Positives = 264/333 (79%)
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R WALDI RKPWI+SL++TD+L L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDRLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
VNR FFPY+QSA L V G+DV++ID A FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|355388867|gb|AER62376.1| hypothetical protein [Hordeum vulgare subsp. spontaneum]
Length = 315
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/315 (65%), Positives = 253/315 (80%)
Query: 199 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 258
DI RKPWI+SL++TDKL SL EARE+LK AR QA+K A N+ C+DVIEEGIV G
Sbjct: 1 DICELRKPWIKSLYKTDKLESLGEAREILKFARAQARKQAANLEHPLICIDVIEEGIVSG 60
Query: 259 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 318
+G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++GGGL
Sbjct: 61 PRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGL 120
Query: 319 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378
MGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +L G
Sbjct: 121 MGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSG 180
Query: 379 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 438
L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQ
Sbjct: 181 ALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQ 240
Query: 439 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 498
DRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR F
Sbjct: 241 DRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMF 300
Query: 499 FPYSQSARLLVSLGV 513
FPY+QSA L V G+
Sbjct: 301 FPYTQSALLFVDYGL 315
>gi|355388915|gb|AER62400.1| hypothetical protein [Brachypodium sp. D49c]
Length = 306
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/305 (64%), Positives = 243/305 (79%)
Query: 222 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 281
EARE+LK AR QA+K A N+ C+DVIEEGIV G +G+ KEA F+ L+ DT +
Sbjct: 2 EAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKS 61
Query: 282 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341
LVHVFF+QRATSKVP TD+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN
Sbjct: 62 LVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNE 121
Query: 342 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 401
++L GI I+AN++ V +GK+T+++ AL ++ G L Y FK+VD+VIEAVIE+V L
Sbjct: 122 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKL 181
Query: 402 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 461
KQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 182 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 241
Query: 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 521
+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A
Sbjct: 242 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRA 301
Query: 522 IRSFG 526
FG
Sbjct: 302 CTKFG 306
>gi|355388911|gb|AER62398.1| hypothetical protein [Aegilops speltoides subsp. speltoides]
Length = 304
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/304 (64%), Positives = 244/304 (80%)
Query: 209 RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 268
+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGIV G +G+ KEA
Sbjct: 1 KSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGIVSGPRAGLWKEAN 60
Query: 269 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 328
F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++GGGLMGSGIATA I
Sbjct: 61 AFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMI 120
Query: 329 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388
L+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL ++ G L Y +FK+V
Sbjct: 121 LSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYEKFKEV 180
Query: 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 448
D+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFS
Sbjct: 181 DLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFS 240
Query: 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 508
PAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L
Sbjct: 241 PAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLF 300
Query: 509 VSLG 512
V G
Sbjct: 301 VDYG 304
>gi|449475201|ref|XP_004154403.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 444
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 248/321 (77%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGF 144
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPGF
Sbjct: 94 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGF 153
Query: 145 GGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204
GGTQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 154 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 213
Query: 205 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 264
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 214 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 273
Query: 265 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 324
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 274 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 333
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 334 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 393
Query: 385 FKDVDMVIEAVIESVPLKQKI 405
FKDVDMVIEAVIE++ LKQ+I
Sbjct: 394 FKDVDMVIEAVIENISLKQQI 414
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGG 146
P VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPGFGG
Sbjct: 2 PAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGFGG 48
>gi|449473562|ref|XP_004153917.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 415
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 247/321 (76%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGF 144
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+ PGF
Sbjct: 8 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLFPGF 67
Query: 145 GGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204
GGTQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 68 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 127
Query: 205 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 264
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 128 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 187
Query: 265 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 324
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 188 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 247
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 248 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 307
Query: 385 FKDVDMVIEAVIESVPLKQKI 405
F+DVDMVIEAVIE++ LKQ+I
Sbjct: 308 FEDVDMVIEAVIENISLKQQI 328
>gi|413945014|gb|AFW77663.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 352
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/352 (54%), Positives = 255/352 (72%), Gaps = 3/352 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+INPPVNAL++ ++A L+ + EA SR+D+KAIVLTG+ GR
Sbjct: 1 MARGITTMEVRADGVAVITIINPPVNALSLDVIASLQRNYAEALSRNDIKAIVLTGSKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F GGFDI F+ M S++ + +++ED KP VAA++G+ALGGGLE+AM C
Sbjct: 61 FCGGFDIAAFENKPKNEKPGSM---SIDFLTDIVEDAHKPSVAAIDGIALGGGLEVAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPG GGTQRLPRLVGL KA+EMML SK+I + +LGL+
Sbjct: 118 HARISTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLPKALEMMLTSKTIKGKMAHELGLV 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DAV ++ +L+ + WAL+I ++KPW +SLHRTD+L L E +++LK AR+QA+ A N
Sbjct: 178 DAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLEEVKDILKFARVQAEMKAAN 237
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ C+DVI+EGI+ G +G++KE K L TS+ L H FFAQRATSK+PN+T+
Sbjct: 238 VQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITN 297
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352
IGL R ++K A++GGGLMGSGIAT ILNN VVLKEVN ++L GI I+
Sbjct: 298 IGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNEQFLSAGINRIK 349
>gi|449471586|ref|XP_004153352.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 332
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/317 (58%), Positives = 244/317 (76%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGF 144
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPGF
Sbjct: 16 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGF 75
Query: 145 GGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204
GGTQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 76 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 135
Query: 205 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 264
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 136 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 195
Query: 265 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 324
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 196 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 255
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 256 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 315
Query: 385 FKDVDMVIEAVIESVPL 401
FKDVDMVIEAVIE++ L
Sbjct: 316 FKDVDMVIEAVIENISL 332
>gi|413948032|gb|AFW80681.1| hypothetical protein ZEAMMB73_867373 [Zea mays]
Length = 460
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/270 (65%), Positives = 222/270 (82%)
Query: 264 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 323
++EA F+EL+ DT + LVHVFF+QRATSK+P TD+GL PR + KVA++GGGLMGSGI
Sbjct: 3 MQEATSFQELLFSDTCKSLVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGI 62
Query: 324 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383
ATA +L+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A+ ++ GVLDY
Sbjct: 63 ATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYE 122
Query: 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 443
FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HCILATNTSTIDLN++GEKT +QDRI G
Sbjct: 123 RFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAG 182
Query: 444 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 503
AHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+Q
Sbjct: 183 AHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQ 242
Query: 504 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
SA V LG+DV++ID A FG+P+GPF+
Sbjct: 243 SALFYVDLGMDVYKIDRACTKFGMPMGPFR 272
>gi|449474069|ref|XP_004154065.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 337
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/307 (60%), Positives = 237/307 (77%)
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159
P VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPGFGGTQRLPRLVGL KA
Sbjct: 2 PAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGFGGTQRLPRLVGLPKA 61
Query: 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 219
+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RRKPWI SLH+T+KL S
Sbjct: 62 LEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLES 121
Query: 220 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
L++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+ KE + F+ L+ DTS
Sbjct: 122 LADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTS 181
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N V+LKEV
Sbjct: 182 KSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEV 241
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
N ++L G+ ++AN++ V +G +T +K + +LKGVLDY FKDVDMVIEAVIE++
Sbjct: 242 NEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENI 301
Query: 400 PLKQKIF 406
LKQ+I
Sbjct: 302 SLKQQII 308
>gi|167586951|ref|ZP_02379339.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
ubonensis Bu]
Length = 694
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/522 (41%), Positives = 302/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLDRAAQDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+V A+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRTVEASAKPVVVAIHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAMAEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A+ P R D+ A ++ AR AK APN P C+D IE
Sbjct: 182 AVAFARKVGAQAGPHPRV---RDRKIVHENAAGFIQFARNSAKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG GV+ E F L+M SR L H FF +RA SK+P+V D + R VR+V
Sbjct: 239 AGVLHGFDHGVIAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REVRQV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y++ KD D++IEAV E + +K+++F +L++A P ILA+NTST+D+N +
Sbjct: 357 RMALITPTLSYADLKDADLIIEAVFEELGVKEQVFRQLDEAAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGEATAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|449019169|dbj|BAM82571.1| fusion protein of glyoxysomal fatty acid oxidation tetrafunctional
protein, and acetyl-CoA acyltransferase [Cyanidioschyzon
merolae strain 10D]
Length = 1145
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/549 (42%), Positives = 325/549 (59%), Gaps = 33/549 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M V+++ DGVAII PPVNAL++ + L + KAIVL G
Sbjct: 1 MTGESVSVQYQPDGVAIIVFSAPPVNALSVNLRRLLALNVANVVADRRAKAIVLYGGEST 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G D+ F + G+ + + D E L+E KP VA + G ALGGGLELA+ C
Sbjct: 61 FSAGADVGEFPEKLGSAENIISLDT--EPFKTLLETSPKPTVACITGTALGGGLELALAC 118
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A +LGLPEL LG+IPG GGTQRLPRL+G+ A++M++ S+ I EE + GL+
Sbjct: 119 HFRVALSDAKLGLPELRLGLIPGLGGTQRLPRLIGVEPALDMIMHSRIIDGEEAHRCGLV 178
Query: 181 DAVVTS---EELLKVSRLWALDIAA---RRKPWIRSLHRTDKLGSLS-EAREVLKLARLQ 233
D +V + E LL+ + AL++A+ + P + L RTDKLG+ E L R
Sbjct: 179 DRLVPASRRETLLREACAVALEVASDPQKMPPPL--LTRTDKLGNADVEKIRSKYLPRAV 236
Query: 234 AKKTAPNMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292
+ Q ++C+ + EGI GG +G EA++F++ + SR L+HVF A R T
Sbjct: 237 EMRQKTGQIQFESCVRAVLEGIERGGGDAGWALEAELFRQCAASEASRALIHVFLASRRT 296
Query: 293 SKVPNVTDIGLKP--RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350
VT+ +P R VAVIGGGLMGSGIA + N VVLKEVN L I+
Sbjct: 297 -----VTNFKAEPHLHEPRTVAVIGGGLMGSGIAACILQNGGRVVLKEVNENALAAAIQR 351
Query: 351 IEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE--FKDVDMVIEAVIESVPLKQKIFSE 408
IEA +++R K+ D A +A + L+G +++ + F DVD+V+EA +E+V KQ IF
Sbjct: 352 IEA----ILSRAKV--DTA-DARRRLQGTIEFDKKLFSDVDLVVEAAVENVQAKQGIFRS 404
Query: 409 LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465
L + PHCILATNTSTI+L+++GE + + R+IGAHFFSPAHVMPLLEIVR RT
Sbjct: 405 LAECTGPHCILATNTSTINLDLIGEAIPQVHKEGRLIGAHFFSPAHVMPLLEIVRANRTR 464
Query: 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS-LGVDVFRIDSAIRS 524
+ + ++ K ++K P++VGNC GFAVNR +FP +Q A L LG+ + ID A +
Sbjct: 465 NRAVQMVLAFAKHLRKTPIIVGNCAGFAVNRMYFPQTQMAFFLTEYLGIHPYDIDRACQE 524
Query: 525 -FGLPIGPF 532
GLP+GPF
Sbjct: 525 VLGLPMGPF 533
>gi|254252171|ref|ZP_04945489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124894780|gb|EAY68660.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 694
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 296/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMDALDRAAQDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ G+ +GGGLELA+G H RIAAP+ Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHGVVMGGGLELALGAHYRIAAPRAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGTPVPSEQLADSGLFDDIAGGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + AR P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 ALAFARKVGARPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHRCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G E + F L+M SR + H FFA+RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSAAEREGFVALMMTPESRAMRHAFFAERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA + + V L E E L +G+ TI N V +GKLT D+ +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETTQEALERGLATIRKNYDAQVAKGKLTHDQRDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RIALIAPTLSYDDLKDADLIVEAVFEELDVKERVFRRLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ + +M V K I+K VV G C G
Sbjct: 417 ASFTKRPHDVVGMHFFSPANVMKLLEVVRGAQTAKDALATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|449472180|ref|XP_004153517.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 350
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 221/269 (82%)
Query: 265 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 324
+E + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 1 QEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 60
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
TA IL+N +V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 61 TALILSNYHVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 120
Query: 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 444
FKDVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 121 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 180
Query: 445 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 504
HFFSPAHVMPLLE+VRT RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 181 HFFSPAHVMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRIFFPYTQA 240
Query: 505 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
A LLV GVD ++ID AI FG+P+GPF+
Sbjct: 241 ALLLVEHGVDPYQIDRAIYKFGMPMGPFR 269
>gi|416997008|ref|ZP_11939200.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
gi|325518003|gb|EGC97818.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
Length = 694
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 301/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D +V E LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMVDGE-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A +P + R K+ A ++ AR AK APN P C+D IE
Sbjct: 182 AVAFARKVGA--QPGLHPRVRDRKI-VHENAAGFIQFARNSAKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D++IEAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALIAPTLSYDDLKDADLIIEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|159482618|ref|XP_001699366.1| hypothetical protein CHLREDRAFT_132158 [Chlamydomonas reinhardtii]
gi|158273002|gb|EDO98796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 705
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 288/470 (61%), Gaps = 26/470 (5%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P V DGVA+ITL PP+NAL ++ L + A + VKA+VLTG F
Sbjct: 5 PEAQYRVDPDGVAVITLNYPPLNALHPLLLRSLFEALRRAHADPAVKAVVLTGANNNFCA 64
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
GFDI+ FQ AG + + + + +E KP+VAAV+G+ALGGGLE+AMGC+AR
Sbjct: 65 GFDISQFQNPD-AGSGGGIDNSINDAICKYLEGGAKPVVAAVQGVALGGGLEVAMGCNAR 123
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+A T+LGLPELTLG+IPGFGGTQRLPRLVGL+K EMML S I +E G+
Sbjct: 124 VAVRGTKLGLPELTLGIIPGFGGTQRLPRLVGLAKGCEMMLTSAPIKAEGREGRGIPALF 183
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ + +P + + DKL L EA +L +AR +A + A +
Sbjct: 184 RCPPPPYHSPLPLPPFLHSLHRPSLSTPSPPDKLPPLGEALALLDMARAEAGRRARGLAH 243
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI-G 302
Q CLD ++ G+ GG G+ E + F LDT + LVH+FFAQRAT KV VTD+ G
Sbjct: 244 PQLCLDAVQAGVERGGQEGLAAEGRAFAAAAALDTHKALVHIFFAQRATKKVKGVTDVPG 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +R VAV+GGGLMGSGIATA L + V+LKEV +G
Sbjct: 304 LKPRPIRCVAVLGGGLMGSGIATALALAGVEVILKEVK--------------------KG 343
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
++Q A+ AL + G LDY+ F DMVIEAVIE +PLKQKIF++LEKAC P IL+TN
Sbjct: 344 AMSQAAADAALGRVSGALDYAGFARADMVIEAVIEDIPLKQKIFADLEKACRPDAILSTN 403
Query: 423 TSTIDLNIVGEKTS----SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
TSTID+ +VG K S ++ R++GAHFFSPAH+MPLLEIVRT+ T AQV
Sbjct: 404 TSTIDIELVGAKMSGGAAARRRLLGAHFFSPAHIMPLLEIVRTKDTGAQV 453
>gi|440795856|gb|ELR16970.1| 3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 570
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 226/546 (41%), Positives = 321/546 (58%), Gaps = 53/546 (9%)
Query: 3 APRVTMEVGNDG--VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
A V++ V DG VA++T+ NPPVNAL+ + GL EA D+VK +V+TG +
Sbjct: 48 AESVSLHVHRDGSGVAVLTIDNPPVNALSRGVFDGLIRLTHEALEDDNVKLLVITGANQK 107
Query: 61 FSGGFDINVFQKVHGAGDVSLM---PDV----SVELV------VNLIEDCKKPIVAAVEG 107
F G +I Q + L+ PD S+ L+ +N +E KP+VAA++
Sbjct: 108 FVAGAEIASIQD-----SIELLRNTPDRLDADSMRLMEREHAWLNWLESQSKPVVAAMDT 162
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167
ALGGGLE+AM CHAR+A +T+LGLPEL LGVIPG GGTQRLPRLVG+ KA++MML S+
Sbjct: 163 FALGGGLEVAMACHARVATRRTKLGLPELALGVIPGLGGTQRLPRLVGMKKAVDMMLSSR 222
Query: 168 SITSEEGWKLGLIDAVVTSE---ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 224
S+ ++E LGL+D VV +L+ + +IA +P++R+ TD+L L EA+
Sbjct: 223 SLKADEAKNLGLVDEVVGGSDPAQLIDAAITVGKEIAEGMRPFVRATQLTDRLEPLPEAK 282
Query: 225 EVLKLARLQAKKTAPNMPQHQ-ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 283
+++ + PN H ACLD ++ G+ GG SGV E + + D S +
Sbjct: 283 KII-----DERAYPPNTVVHPFACLDAVQAGVQMGGSSGVDAERRAVVACLYNDASEAMT 337
Query: 284 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343
H FFA+R T+ V VTD GL+PR +R V +IGGGLMGSGIATA + + I VV+KEV+ +
Sbjct: 338 HAFFAERKTANVSGVTDQGLQPRPIRSVGIIGGGLMGSGIATALLFSGIAVVIKEVSRQL 397
Query: 344 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 403
L + T+ AN+ V R +LT+++ + L M+ L +++F VDMVIEAV+E++ +KQ
Sbjct: 398 LDAVVNTVTANLDRAVERRRLTREQRDRLLSMVTPTLQFADFVAVDMVIEAVVENLKVKQ 457
Query: 404 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI----- 458
+F E+EK P CILATNTSTI ++ + T S R++G HFFS A +
Sbjct: 458 DVFREVEKVVKPDCILATNTSTIPIDQIATATQSAHRMLGVHFFSHASGGDRADARGVGA 517
Query: 459 -----VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 513
RT ++ AQ D G++ P + VNR FFP+ Q+A LLV GV
Sbjct: 518 GDRGHARTGQSPAQ---DAHRRGQL----PWIT-------VNRIFFPFFQAASLLVDCGV 563
Query: 514 DVFRID 519
D +RID
Sbjct: 564 DPYRID 569
>gi|206560342|ref|YP_002231106.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
gi|198036383|emb|CAR52279.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
Length = 700
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 299/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 15 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 74
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 75 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 128
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 129 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 188 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 244
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 245 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 302
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 303 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 362
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 363 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 422
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 423 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 482
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 483 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 524
>gi|421866883|ref|ZP_16298545.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|444358524|ref|ZP_21159920.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
gi|358073047|emb|CCE49423.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|443603879|gb|ELT71857.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
Length = 694
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 299/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|78066676|ref|YP_369445.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77967421|gb|ABB08801.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 694
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 300/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++TL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVLTLNNPPVNGLGLSTRQGVMDALDRAVQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIHAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ + A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHANAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLHGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGVATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKAGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|170733265|ref|YP_001765212.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169816507|gb|ACA91090.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 694
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 299/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAARDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEVSAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|161524541|ref|YP_001579553.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189350703|ref|YP_001946331.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341970|gb|ABX15056.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189334725|dbj|BAG43795.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 694
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 296/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR K APN P + C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIDHDNAAGFIQFARNSVKAAAPNFPAPRKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFR 518
>gi|107028915|ref|YP_626010.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia
cenocepacia AU 1054]
gi|116689927|ref|YP_835550.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
gi|105898079|gb|ABF81037.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia AU 1054]
gi|116648016|gb|ABK08657.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia HI2424]
Length = 694
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 299/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAARDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNYPALHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L ++ L Y + K+ D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLKEADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|172060871|ref|YP_001808523.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171993388|gb|ACB64307.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 694
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 297/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALQDASVTAIVLTGTGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|115351945|ref|YP_773784.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115281933|gb|ABI87450.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 694
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 297/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|421476901|ref|ZP_15924758.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
gi|400227466|gb|EJO57466.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
Length = 694
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 295/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFR 518
>gi|221215077|ref|ZP_03588044.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
gi|221165013|gb|EED97492.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
Length = 694
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 295/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRSVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFR 518
>gi|170701227|ref|ZP_02892196.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170133856|gb|EDT02215.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 694
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 297/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALRDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFACKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|444371965|ref|ZP_21171470.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443594373|gb|ELT63030.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 694
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 298/522 (57%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSCDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|221198195|ref|ZP_03571241.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
gi|221208312|ref|ZP_03581315.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221171725|gb|EEE04169.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221182127|gb|EEE14528.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
Length = 694
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 295/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAVHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDVKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFR 518
>gi|387902459|ref|YP_006332798.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387577351|gb|AFJ86067.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 694
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ E AT V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMAGLERATQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLATSGLFDAMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARQAGAQSGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVVGAGTMGGGIAMNFVNAGLPVTLLETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + D D+V+EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLHDADLVVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|421473060|ref|ZP_15921207.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400221799|gb|EJO52227.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 694
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 295/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAVHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDVKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFR 518
>gi|167569618|ref|ZP_02362492.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis C6786]
Length = 694
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 293/521 (56%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D +V + LL
Sbjct: 123 LPEVKLGILPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDELVEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKVGAASGPHPRV---RDREIVHQNAAGFIQFARNSVKALAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G++ G G+ E F LV SR L H FF +RA SK+P+V G R + VA
Sbjct: 239 AGVLQGFDKGLAFERDCFIALVQTPESRALRHAFFGERAASKIPDVP-AGTPARAIESVA 297
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDAR 357
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ ++K L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALVKPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGF 477
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|389876490|ref|YP_006370055.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
gi|388527274|gb|AFK52471.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
Length = 710
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 306/522 (58%), Gaps = 15/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ NPPVNAL+ + GL D E + D+ KA+VL G G F G DI F K
Sbjct: 24 VGVITVDNPPVNALSQHVRQGLLDCLAEGLADDEAKALVLVGAGRTFIAGADIREFGKPL 83
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D++ V++ E+ KP+VAA+ G ALGGGLE+A+GCH R+A + ++GLP
Sbjct: 84 AEPDLNG--------VISTYENATKPVVAAIHGTALGGGLEVALGCHYRVAVAQGKVGLP 135
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+ G+ AI+M+ K + + + +LG+IDAVV +EL+ +
Sbjct: 136 EVKLGILPGAGGTQRLPRVAGVEAAIDMITTGKFVPAGKALQLGIIDAVV--DELIPGAV 193
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + P R +K+ + A+ L R Q K A C D +
Sbjct: 194 AFARKLVEDGAPLRRVRDMDEKVKAFDAAK--LPEIRKQVVKAARGQMSPVGCFDAVAGA 251
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAV 313
+ G+ E ++F L+ D S+ L H+FFA+R K+P+V D P +R+ A+
Sbjct: 252 VTLPFDEGLKNEREIFGGLMASDQSKALRHIFFAEREALKIPDVPGDTPTLP--IRQAAI 309
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA I V + E++++ L +G+ I AN V++G+LTQD + +
Sbjct: 310 IGAGTMGGGIAMNFANAGIPVKVLEMSADALERGLGIIRANYAATVSKGRLTQDAMDKRM 369
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+++GVLDY KD D++IEAV E + +K+K+FS L+ P +LA+NTST+D++ +
Sbjct: 370 GLIEGVLDYDALKDADIIIEAVFEEMDIKKKVFSTLDAVAKPGAVLASNTSTLDIDEIAA 429
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS + +IG HFFSPA+VMPLLE+VR +TS QVI M + K I KVPV+VGNC GF
Sbjct: 430 TTSRPEFVIGTHFFSPANVMPLLELVRGAKTSYQVISTSMKLAKTIGKVPVLVGNCDGFV 489
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR PY Q L++ G ++D ++ +GL +GPF G
Sbjct: 490 GNRMLEPYVQQGELMLVEGALPAQVDGVLQRWGLAMGPFTMG 531
>gi|259415983|ref|ZP_05739903.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
gi|259347422|gb|EEW59199.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
Length = 696
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/533 (38%), Positives = 307/533 (57%), Gaps = 17/533 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ P V MEV +D +A+I + NPPVNAL+ + +GL F E RDDVKA+V+ G
Sbjct: 1 MSNP-VLMEVVDD-IAVIAIANPPVNALSHAVRSGLDAAFAEIARRDDVKAVVIYGTDRT 58
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F K +PD+ +N IE C P+VAA+ G ALGGGLE+A+G
Sbjct: 59 FIAGADIREFGK---PPQEPFLPDL-----INRIEACAVPVVAALHGTALGGGLEVALGA 110
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A P + GLPE+TLG++PG GGTQRLPRL G+ A+E + + I+++E K G+I
Sbjct: 111 HYRVAVPNARFGLPEVTLGILPGAGGTQRLPRLAGVEFALEAITSGRQISADEALKTGVI 170
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D + + ++ ++ +A ++ A + RT +L A EV AR + K A
Sbjct: 171 DRISDTSDIREMGLTYARELVASGA----TPRRTSELSPAPVAAEVFDAARTRLAKKARG 226
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
Q C+ +E G+ E +F+EL+ D L+H FFA+R +KVP + D
Sbjct: 227 QLAPQNCIKAVESATHLSFAEGLANERALFQELMESDQRAALIHAFFAERQVAKVPEIKD 286
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+ PR + ++ VIGGG MG+GIA + +L + V L E +++ + + + +RG V
Sbjct: 287 VA--PRAIDQIGVIGGGTMGAGIAVSALLAGLQVTLIERDADAVARAEANVSKTLRGSVK 344
Query: 361 RGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
RGKL+Q+K + + + DY+ + D+VIEAV ES+ +K+ +F++L+ C P +L
Sbjct: 345 RGKLSQEKYDAIMGGTFRASDDYATLAEADVVIEAVFESMEVKKDVFTKLDAICKPGAVL 404
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS +D+N + TS + +IG HFFSPAHVM LLEIV ++T+ +V + K +
Sbjct: 405 ASNTSYLDVNEIAAMTSRPEDVIGLHFFSPAHVMRLLEIVVADKTAPEVTATGFALAKRL 464
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
KKV V G C GF NR Y ++ V G F +D A+ +FGL +GP+
Sbjct: 465 KKVAVRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVNFGLAMGPY 517
>gi|134295941|ref|YP_001119676.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia vietnamiensis G4]
gi|134139098|gb|ABO54841.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
Length = 694
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 291/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMAGLERAAQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLATSGLFDAMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A+ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARQAGAQSGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++HG G + E F L+M SR L H FF +RA SK+P+V D + R +R++
Sbjct: 239 AGVLHGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRI 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVVGAGTMGGGIAMNFVNAGLPVTLLETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + D D+V+EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLHDADLVVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|402566295|ref|YP_006615640.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402247492|gb|AFQ47946.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 694
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRIAAPGAQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLASSGLFDEMADGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + ++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGTQKGPHPRV---RDRKIVHENAAGFIQFARNSAQAAAPNFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G + E F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D+++EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDVDKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|449532298|ref|XP_004173119.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 459
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 217/269 (80%)
Query: 265 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 324
+E + F+ L+ DTS+ L+HVF +QR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 3 QEIEDFQVLLHADTSKSLIHVFLSQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 62
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 63 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 122
Query: 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 444
FKDVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 123 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 182
Query: 445 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 504
HFFSPAHVMPLLE+VR RT+ QVI+DL+ V K IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 183 HFFSPAHVMPLLEVVRXNRTAPQVIVDLVDVEKRIKKTPVVVGNCTGFAVNRMFFPYTQA 242
Query: 505 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
A LLV GVD ++ID AI FG+P+GPF+
Sbjct: 243 ALLLVEHGVDPYQIDRAIYKFGMPMGPFR 271
>gi|167836289|ref|ZP_02463172.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 694
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 210/521 (40%), Positives = 295/521 (56%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGVMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL DA+V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAQSGLFDALVEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A AA P R D+ A ++ AR AK A + P C+D IE
Sbjct: 182 AVAFARKAAAASGPHPRV---RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G++ G G+ E F LV SR L H FF +RA SK+P+V R ++ VA
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVA 297
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GI + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGITMNFLNAGLPVTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDAR 357
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA+VM LLE+VR ERT+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGF 477
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|330817251|ref|YP_004360956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327369644|gb|AEA61000.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 694
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 296/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGYSTRVGVMDGLDRALQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + S+ ++ +E KP+VAAV + +GGGLELA+G H RIAAP TQ+
Sbjct: 69 PKA------LQEPSLHTLIAAVEASAKPVVAAVHSVVMGGGLELALGAHYRIAAPGTQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ +G++PG GGTQRLPR +GL A+ M++ ++ SE+ K GL D + + LL+
Sbjct: 123 LPEVKIGLLPGAGGTQRLPRALGLETALNMIVSGAAVPSEQLAKSGLFDEMAEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ A + A+ P R D+ A ++ AR A+ AP P C+D IE
Sbjct: 182 AVALARRVGAKPGPHPRV---RDRKIEHPNAAGFIQFARNSARAAAPQYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G++ E + F LV SR L H FF +RA SK+P+V D + R +RK+
Sbjct: 239 AGVLKGFDQGLIDEREGFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRKL 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GI + + V L E E L +G+ TI N V +GKL+++K
Sbjct: 297 GVIGAGTMGGGITINFLNAGLPVTLLETKQEALERGLATIRKNYEVQVKKGKLSEEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + KD D++IEAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALISPTLSYEDLKDADLIIEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGMHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIEAFGFAMGPFR 518
>gi|424903808|ref|ZP_18327321.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
gi|390931681|gb|EIP89082.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 692
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 210/521 (40%), Positives = 295/521 (56%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 7 DGVAVITLNNPPVNGLGLSTRLGVMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 67 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 120
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ + GL DA+V + LL
Sbjct: 121 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAQSGLFDALVEGD-LLDA 179
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A AA P R D+ A ++ AR AK A + P C+D IE
Sbjct: 180 AVAFARKAAAASGPHPRV---RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIE 236
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G++ G G+ E F LV SR L H FF +RA SK+P+V R ++ VA
Sbjct: 237 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVA 295
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GI + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 296 VIGAGTMGGGITMNFLNAGLPVTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDAR 355
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 356 MALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 415
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA+VM LLE+VR ERT+ V+ +M + K I+K VV G C GF
Sbjct: 416 AFTKRPQDVVGMHFFSPANVMKLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGF 475
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 516
>gi|91788435|ref|YP_549387.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
gi|91697660|gb|ABE44489.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
Length = 699
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 296/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + + D ++A + VK+IVLTG G FSGG DI F
Sbjct: 11 VALITLDNPPVNGLGYATRSSITDNLQKANADAAVKSIVLTGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 GTPKALLEPNLLS--VIRAVENSSKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRTVGVEPALNMIVSGEPVKSELLAQIPGQKL--FDRMAASPES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A IA R P +R+L G + AR K A N P C
Sbjct: 183 LAEDALAFAQSIADTRPLPLVRNLPCKHPDGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V + + R
Sbjct: 238 VDAVEAATKKKFEDGLAFERELFINLMWTPESRALRHIFMAERAASKIPDVPEDTPR-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++ +AVIG G MG GI+ + I V + E+ E L +GI TI N V +GKL QD
Sbjct: 297 IKSIAVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIRKNYESQVKKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + KD DMVIEAV E + +K+K+ EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMSLLSTTLSYDDLKDADMVIEAVFEEMGVKEKVLKELDRVMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T +IG HFFSPA+VM LLE+VR E+T+ V+ +M +GK IKK VV G
Sbjct: 417 MNQIASFTKRPQDVIGTHFFSPANVMKLLEVVRGEKTAKDVLATVMALGKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLEEGATPAQVDKAVEKFGFAMGPFRMG 524
>gi|388568321|ref|ZP_10154741.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
gi|388264521|gb|EIK90091.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
Length = 704
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 302/530 (56%), Gaps = 21/530 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN L + G+ E+A + VKA+VLTG G FSGG DI F
Sbjct: 11 IALITLNNPPVNGLGLATRQGITAGLEQAQADPAVKAVVLTGAGKAFSGGADIKEFGTPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ +E+C KP+VAA+ +A+GGGLEL++GCH RIAAP + LP
Sbjct: 71 ALAEPNLLS------VILAVENCSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGANIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL---GLIDAVVTS-EELL 190
E+ LG+IPG GGTQRLPR++G+ A+ M++ + + SE +L L D + +S E+L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVEAALNMIVSGEPVKSEMLAQLPGQKLFDKMASSPEKLA 184
Query: 191 KVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + +A ++AA+ P +R+L K G + AR K A N P
Sbjct: 185 EEAIAFAKEVAAKHADGSPLPLVRNLPCKHKDGDA-----YFQFARNMVKGMAKNFPAPA 239
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
C+D +E G+L E ++F L+ R L H+F A+RA SK+P+V +
Sbjct: 240 KCVDAVEAATKQKFDQGMLTEREMFINLMWTPECRALRHLFMAERAASKIPDVPE-DTPQ 298
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + KVAVIG G MG GI+ + I V + E+ E L +G+ + N V +GKL
Sbjct: 299 RKIEKVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGVGVMRGNYEAQVKKGKLK 358
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDK + + +LK ++Y + KD D+VIEAV E + +K+ +F +L++ P ILA+NTST
Sbjct: 359 QDKLDARMGLLKTTVNYEDIKDADLVIEAVFEEIGVKEAVFKKLDEVMKPGAILASNTST 418
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D+N + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M V K IKK VV
Sbjct: 419 LDVNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMAVAKKIKKTAVV 478
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR Y + L+ G ++D AI FG +GPF+ G
Sbjct: 479 SGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDRAIEKFGFAMGPFRMG 528
>gi|217421439|ref|ZP_03452943.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
gi|217395181|gb|EEC35199.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
Length = 694
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+V
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEV 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|375105594|ref|ZP_09751855.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374666325|gb|EHR71110.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 698
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 301/528 (57%), Gaps = 22/528 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L AG+ E+A + VKA+V+TG G FSGG DI F K
Sbjct: 11 VAVITLNNPPVNGLGYATRAGIAAGLEKANADAAVKAVVITGAGKAFSGGADIKEFGKPE 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ ++ L E KPIVAA+ + +GGGLELA+GCH R++AP + LP
Sbjct: 71 ATAEPNLLS------LIKLCEASGKPIVAALHSVVMGGGLELALGCHYRVSAPGAAIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ +G++PG GGTQRLPR++G+ A+ M++ + + SE G KL ID V+ + L
Sbjct: 125 EVKIGLVPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLAAQPGQKL--IDKVIDGD-L 181
Query: 190 LKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L + +A+D+A RR P +RSL KL S ++ AR K A N P C+
Sbjct: 182 LAGAIAFAVDVADRRPLPLVRSL----KL-SHPNPDAYIQFARNTVKAMAKNFPAPAKCV 236
Query: 249 DVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
D +E+ + + G+ E F L++ S+ L H FF +RA SK+P+V + R
Sbjct: 237 DCVEQALKAPNFEEGMRFELATFMGLMLTPESKALRHAFFGERAASKIPDVPE-STPQRA 295
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ KVAVIG G MG GI+ + I V + E+ + L +G+ TI N V +GKL D
Sbjct: 296 IAKVAVIGAGTMGGGISMNFLNAGIPVTMLEMKQDALDRGVATIRKNYEAQVKKGKLKDD 355
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y E KD D+VIEAV E + +K+K+F L++ P ILA+NTST+D
Sbjct: 356 KYQQRMALLTTTLSYDEIKDADLVIEAVFEEIGVKEKVFKALDEVMKPGAILASNTSTLD 415
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G
Sbjct: 416 VDKIASFTQRPQDVVGLHFFSPANVMKLLEVVRGAKTAKDVLATVMAVAKKIRKTAVVSG 475
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 476 VCDGFIGNRMIEQYSRQAGFLLEEGASPAQVDKAIERFGFAMGPFRMG 523
>gi|309781993|ref|ZP_07676723.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|404377685|ref|ZP_10982785.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
gi|308919059|gb|EFP64726.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|348611680|gb|EGY61320.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
Length = 693
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 294/525 (56%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHFRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTSESRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVSTIRKNYENSAKKGKLTQEKVE 354
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|241663087|ref|YP_002981447.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12D]
gi|240865114|gb|ACS62775.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12D]
Length = 693
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 294/525 (56%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTPESRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYENSAKKGKLTQEKVE 354
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|187928533|ref|YP_001899020.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12J]
gi|187725423|gb|ACD26588.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12J]
Length = 693
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/525 (40%), Positives = 294/525 (56%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHFRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTSKSRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTMLETKQEALDRGVATIRKNYENSAKKGKLTQEKVE 354
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|121604744|ref|YP_982073.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120593713|gb|ABM37152.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
Length = 699
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 213/528 (40%), Positives = 292/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L L D ++A D VK+IV+TG G FSGG DIN F
Sbjct: 11 VALITLSNPPVNGLGYATRVSLTDNLQKANDDDAVKSIVITGAGKAFSGGADINEFGSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ IE+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 71 AVQEPNLLS------VILAIENSSKPVVAAIHSVCMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS-EE 188
E+ LG++PG GGTQRLPR +G+ A+ M++ +S+ S+ G KL D + +S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRALGVEPALNMIVSGESVKSDMLAQIPGQKL--FDRMASSVET 182
Query: 189 LLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L + +A IA R P +RSL + G + AR K A N P C
Sbjct: 183 LADEAFAFAQAIADTRPLPLVRSLPCKHRNGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E + F L+ SR L H+F A+RA SK+P++ K R
Sbjct: 238 VDAVEAATKQKFDEGMRLEREFFTNLMFTPESRALRHIFMAERAASKIPDLPADTPK-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ VAVIG G MG GIA + I V + E+ E L +GI TI N V +GKL QD
Sbjct: 297 INSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKPEALERGIATIRKNYESQVKKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + KD D+VIEAV E + +KQ +F EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMGLLSTTLSYGDLKDADLVIEAVFEDMGVKQAVFRELDRVMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
LN + T + ++G HFFSPA++M LLE+VR E+T V+ +M + K I+K VV G
Sbjct: 417 LNQIASFTQRPEDVVGLHFFSPANIMKLLEVVRGEKTGKDVLATVMAIAKKIRKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y + L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMG 524
>gi|167562436|ref|ZP_02355352.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis EO147]
Length = 694
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 291/521 (55%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL D +V + LL
Sbjct: 123 LPEVKLGILPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDELVEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A P R +R A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKVGAASGPHPRVRNREI---VHENAAGFIQFARNSVKALAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G++ G G+ E F LV S L H FF +RA SK+P+V G R + VA
Sbjct: 239 AGVLQGFDKGLAFERDCFIALVQTPESHALRHAFFGERAASKIPDVP-AGTPARVIESVA 297
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDAR 357
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ ++K L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALVKPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGF 477
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|53719060|ref|YP_108046.1| fatty acid degradation protein [Burkholderia pseudomallei K96243]
gi|167815336|ref|ZP_02447016.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei 91]
gi|167902285|ref|ZP_02489490.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei NCTC 13177]
gi|237812653|ref|YP_002897104.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254179451|ref|ZP_04886050.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|418382845|ref|ZP_12966770.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
gi|418553051|ref|ZP_13117892.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|52209474|emb|CAH35426.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei K96243]
gi|184209991|gb|EDU07034.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|237506159|gb|ACQ98477.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385372167|gb|EIF77292.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|385376964|gb|EIF81593.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
Length = 694
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTGRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|134277281|ref|ZP_01763996.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
gi|134250931|gb|EBA51010.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
Length = 694
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTGRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|167719148|ref|ZP_02402384.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
DM98]
Length = 694
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|53723637|ref|YP_103090.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|76810376|ref|YP_333850.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1710b]
gi|121599487|ref|YP_993247.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia mallei SAVP1]
gi|124384112|ref|YP_001029308.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126440121|ref|YP_001059329.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|126449433|ref|YP_001080755.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|166998730|ref|ZP_02264584.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|167910526|ref|ZP_02497617.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
112]
gi|167918554|ref|ZP_02505645.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
BCC215]
gi|226197152|ref|ZP_03792729.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238562188|ref|ZP_00440761.2| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|254177997|ref|ZP_04884652.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|254189161|ref|ZP_04895672.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254200037|ref|ZP_04906403.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|254206372|ref|ZP_04912724.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|254259421|ref|ZP_04950475.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|254358214|ref|ZP_04974487.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|418540588|ref|ZP_13106116.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|418546832|ref|ZP_13112021.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
gi|52427060|gb|AAU47653.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|76579829|gb|ABA49304.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
pseudomallei 1710b]
gi|121228297|gb|ABM50815.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei SAVP1]
gi|124292132|gb|ABN01401.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219614|gb|ABN83120.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
668]
gi|126242303|gb|ABO05396.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei NCTC
10247]
gi|147749633|gb|EDK56707.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|147753815|gb|EDK60880.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|148027341|gb|EDK85362.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|157936840|gb|EDO92510.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160699036|gb|EDP89006.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|225930531|gb|EEH26541.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238523039|gb|EEP86480.1| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|243065085|gb|EES47271.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|254218110|gb|EET07494.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|385361078|gb|EIF66976.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|385362861|gb|EIF68655.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
Length = 694
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/522 (39%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|386861445|ref|YP_006274394.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1026b]
gi|418533716|ref|ZP_13099575.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385360676|gb|EIF66590.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385658573|gb|AFI65996.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026b]
Length = 694
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 292/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K ++K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKVRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|420247746|ref|ZP_14751139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398070461|gb|EJL61761.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 694
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 296/525 (56%), Gaps = 17/525 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRTGIIEGVERALGDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKALQEPTLM------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ + DA++ + L++
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPIFDALIEGD-LME 180
Query: 192 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A + A+ P IR D+ A ++ AR A N P C+D
Sbjct: 181 GALAFARKVGAQSGSHPKIR-----DRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCID 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 308
+E G++ G G+ E + F LV S+ L H FF +RA SK+P+V +D + R +
Sbjct: 236 AVEAGVLEGFEQGMKVERECFLALVQTPESKALRHAFFGERAASKIPDVPSDTPV--RDI 293
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+KVAVIG G MG GIA I + V++ E + L +GI TI N V +GKLT +
Sbjct: 294 KKVAVIGAGTMGGGIAMNFINAGLPVMMLETKQDALDRGIATIRKNYEATVKKGKLTMEA 353
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ + L Y + KD D++IEAV E + +K+++F L++ P ILA+NTST+DL
Sbjct: 354 LEQRMASITPTLSYDDLKDADLIIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDL 413
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K IKK VV G
Sbjct: 414 NKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKVAKKIKKTAVVSGV 473
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 474 CDGFIGNRMIEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 518
>gi|390571716|ref|ZP_10251953.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389936330|gb|EIM98221.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 694
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 295/523 (56%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRTGIIEGVERALGDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKALQEPTLM------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ + DA++ + L++
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPIFDALIEGD-LME 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + D+ A ++ AR A N P C+D +
Sbjct: 181 GALAFARKVGAQSGPHPKI---RDRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G++ G G+ E + F LV S+ L H FF +RA SK+P+V +D + R ++K
Sbjct: 238 EAGVLKGFEQGMKVERECFLALVQTPESKALRHAFFGERAASKIPDVPSDTPV--RDIKK 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA I + V++ E + L +GI TI N V +GKLT +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGLPVMMLETKQDALDRGIATIRKNYEATVKKGKLTMEALE 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + L Y + KD D++IEAV E + +K+++F L++ P ILA+NTST+DLN
Sbjct: 356 QRMASITPTLSYDDLKDADLIIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDLNK 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K IKK VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKVAKKIKKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 518
>gi|167581600|ref|ZP_02374474.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 694
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A + AIVL G G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAIAAIVLAGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA SK+P+V D + R ++ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIKSV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFLNAGLPVTLLETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIENFGFAMGPFR 518
>gi|83721623|ref|YP_442663.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167619716|ref|ZP_02388347.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257138876|ref|ZP_05587138.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655448|gb|ABC39511.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 694
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A + AIVL G G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAIAAIVLAGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV SR L H FF +RA SK+P+V D + R ++ V
Sbjct: 239 AGVLQGFGKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIKSV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFLNAGLPVTLLETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIETFGFAMGPFR 518
>gi|398806814|ref|ZP_10565713.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
gi|398087179|gb|EJL77776.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
Length = 702
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 213/528 (40%), Positives = 291/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L L D ++A + VKAIV+TG G FSGG DI F
Sbjct: 11 VALITLSNPPVNGLGHATRLSLTDNLQKANADAAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP T + LP
Sbjct: 67 --GTPKALTEPNLLSVIRAVENSAKPVVAAIHSVCMGGGLELALGCHYRIAAPGTNIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR++G+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLGVEPALNMIVSGEPVKSELLAQIPGQKL--FDKLAASPES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A ++ R P +R L G + AR K A N P C
Sbjct: 183 LAQEALAFAQSVSDTRPLPLVRELRAKHPNGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E + F L+ SR L H+F A+RA SK+P+V + K R
Sbjct: 238 VDAVEAATKKKFEEGMALEREFFINLMWTPESRALRHIFMAERAASKIPDVPEDTPK-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ VAVIG G MG GIA + + V + E+ E L KGI I+ N V +GKL QD
Sbjct: 297 INSVAVIGAGTMGGGIAMNFLNAGVPVKILEMKQEALDKGIGIIKKNYEAQVKKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + KD DMVIEAV E + +K+K+F EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMSLLSTTLSYDDLKDADMVIEAVFEDMGVKEKVFKELDRVMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T ++G HFFSPA+VM LLE+VR +T V+ +M VGK IKK VV G
Sbjct: 417 VNQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKDVLATVMAVGKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y + L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMG 524
>gi|17546478|ref|NP_519880.1| trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia
solanacearum GMI1000]
gi|17428776|emb|CAD15461.1| probable trifunctonal: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 706
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 210/525 (40%), Positives = 290/525 (55%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A DVKAIV+TG G FSGG DI F
Sbjct: 21 QDGVAVITLSNPPVNGLGHATRLGIVEGMVRAGDDPDVKAIVITGAGKAFSGGADIREFN 80
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 81 TPKA------MQEPTLHAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 134
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ ++ SE+ K GL D ++ + L+
Sbjct: 135 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAVPSEQLAKSGLFDQMIEGD-LMA 193
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +AL AA K P +R D+ L+ AR A N P C+D
Sbjct: 194 GAIGFALKAAAEGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDA 248
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + G+ E +F LV SR L H FF +RA SK+P+V + R V
Sbjct: 249 VQAAVEKRFDDGIRFERDLFIALVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVET 307
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA + I V + E E L +GI TI N +GKLT K
Sbjct: 308 VAVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGIATIRKNYESSAKKGKLTPGKVE 367
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +LK L Y + +D D+VIEAV E + +K+ +F L+ P ILA+NTST+D++
Sbjct: 368 ARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDAVAKPGAILASNTSTLDVDR 427
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 428 IAGFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKLAKAIKKTAVVSGVCD 487
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D A+ +FG +GPF+ G
Sbjct: 488 GFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVETFGFAMGPFRMG 532
>gi|323526029|ref|YP_004228182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383031|gb|ADX55122.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 694
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 293/523 (56%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAERDPAIRAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + S++ GL D +V + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVDSQKLASSGLFDELVEGD-LAE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + R A ++ AR A + P C+D +
Sbjct: 181 AALAFARKVGAQAGPHPKVRERKI---DHPNAEGFIQFARNSVAAVAKHFPAPLKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +R+
Sbjct: 238 EAGVKHGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRR 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA + I V L E+ E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFVNAGIPVTLLEMKQEVLQRGLATIRGNYEASVKKGKLKAEALE 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N
Sbjct: 356 ARMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVNR 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRAQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKQIRKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|344170553|emb|CCA82972.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase,enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [blood disease bacterium R229]
Length = 693
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 286/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIQFERALFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQEKVEE 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + KD D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 FMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMG 519
>gi|300691451|ref|YP_003752446.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
gi|299078511|emb|CBJ51166.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
Length = 693
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 286/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIQFERVLFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQEKVEE 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + KD D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 FMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMG 519
>gi|170692430|ref|ZP_02883593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170142860|gb|EDT11025.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 694
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 296/523 (56%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + ++A+VLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPAIQAVVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKTVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + S++ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLESALNMIVSGAPVDSQKLAGSGLFDELAEGD-LTQ 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A++ P + D+ A ++ AR A N P C+D +
Sbjct: 181 AALAFARKVGAKQGPHPKV---RDRKIEHPNAEGFIQFARNSVAAIAKNFPAPLKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ +G G+ E + F LV SR L H FFA+RA SK+P+V D + R +R+
Sbjct: 238 EAGVKNGFDKGLAFERECFVALVQTPESRALRHAFFAERAASKIPDVPADTPV--REIRQ 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA I I V L E+ + L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLEMKQDALERGLATIRNNYEASVKKGKLKPEALQ 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + K+ D+++EAV E + +K+++F L++ P ILA+NTST+D++
Sbjct: 356 ERMALITTTLSYDDLKNADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVDK 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K IKK VV G C
Sbjct: 416 IAAFTKRPQDVVGTHFFSPANVMKLLEVVRGEKTAKDVLATVMKLAKKIKKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|339492228|ref|YP_004712521.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799600|gb|AEJ03432.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 701
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 300/520 (57%), Gaps = 15/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F+EA +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFQEADEAPEVSAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGTALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHHIVDELFEGD-LIEAGL 183
Query: 195 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G+ +E ++F E + L+H FFA+R K+ ++ +D+ KPR +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDV--KPRPIRTAA 299
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG GIA + + V L E+N + L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANAGVPVKLLEINDDALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALITGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 AFTRRPEDVVGLHFFSPANVMRLLEVVRGERTSDEVLATAMAIGKQLKKVSVVVGVCDGF 479
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|238026993|ref|YP_002911224.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
gi|237876187|gb|ACR28520.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
Length = 694
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/522 (38%), Positives = 293/522 (56%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++TL NPPVN L A L + A + V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVLTLDNPPVNGLGHSTRAALMAGLDRALADASVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ ++ +E KP++AAV + +GGGLELA+G H RIAAP TQ+
Sbjct: 69 PKA------LQEPNLHTLIAAVEASPKPVIAAVHAVVMGGGLELALGAHYRIAAPGTQVA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ +G++PG GGTQRLPR VGL A+ M++ + +E+ GL D + + LL
Sbjct: 123 LPEVKIGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPAEQLAASGLFDEIAAGD-LLDA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ + + A+ P R D+ ++ AR K AP P C+D IE
Sbjct: 182 AVAFGRRVGAQPGPHPRV---RDRAIVHPNPAGFIQFARNSVKAAAPQYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G+++G G+ E + F LV SR L H FFA+RA SK+P+V D + R +R+V
Sbjct: 239 SGVLNGFEQGLADEREGFVALVQTPESRALRHAFFAERAASKIPDVPADTPV--REIRRV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + VVL E E L +G+ TI N V +GKLT +K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVVLLETKQEALDRGLATIRKNYEAQVKKGKLTAEKLEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L ++ L Y + + D++IEAV E + +K+++F L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLGEADLIIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVDRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTQRPQDVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQIAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI +FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEAFGFAMGPFR 518
>gi|126453618|ref|YP_001066597.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
1106a]
gi|167845292|ref|ZP_02470800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
B7210]
gi|242316511|ref|ZP_04815527.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
gi|254198130|ref|ZP_04904552.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|254297334|ref|ZP_04964787.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|126227260|gb|ABN90800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106a]
gi|157808034|gb|EDO85204.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|169654871|gb|EDS87564.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|242139750|gb|EES26152.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
Length = 694
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 291/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV S L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESCALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 518
>gi|403519024|ref|YP_006653157.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
gi|403074666|gb|AFR16246.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
Length = 692
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 291/522 (55%), Gaps = 13/522 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 7 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 67 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 120
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 121 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 179
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 180 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 236
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
G++ G G+ E F LV S L H FF +RA K+ +V D + RG+ V
Sbjct: 237 AGVLQGFDKGLAFERDCFVALVQTPESCALRHAFFGERAAGKIADVPADTAV--RGIESV 294
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 295 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 354
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 355 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 414
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 415 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 474
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 475 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFR 516
>gi|307729675|ref|YP_003906899.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307584210|gb|ADN57608.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 694
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 292/525 (55%), Gaps = 17/525 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRLGIMEGIERAQRDPGIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKAVEASAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + S++ GL D +V + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVDSQQLAGSGLFDELVQGD-LAT 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSE--AREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A + A+ P H T + + A L+ AR A + P C+D
Sbjct: 181 TALAFARKVGAKEGP-----HPTVRERKIEHPNAEGFLQFARNSVAAVAKHFPAPLKCID 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 308
+E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +
Sbjct: 236 AVEAGVKHGFDKGLAVERECFTALVQTPESRALRHAFFGERAASKIPDVPADTPV--REI 293
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R+VAVIG G MG GIA I I V L E+ E L +G+ TI +N V +GKL +
Sbjct: 294 RRVAVIGAGTMGGGIAMNFINAGIPVTLLEMKQEALERGLATIRSNYEASVKKGKLKPEA 353
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ ++ L Y + K D+++EAV E + +K+++F L++ P ILA+NTST+D+
Sbjct: 354 VAERMALIAPTLSYDDLKSADLIVEAVFEELGVKEQVFRRLDEIARPGAILASNTSTLDV 413
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 414 NRIASFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMQLAKKIRKTAVVSGV 473
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 474 CDGFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|344174706|emb|CCA86516.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia syzygii R24]
Length = 693
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 285/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPDAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIDGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIRFERALFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+
Sbjct: 296 VVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQETVEE 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + KD D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKQLDEVVKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFGFAMGPFRMG 519
>gi|386018756|ref|YP_005936780.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
gi|327478728|gb|AEA82038.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
Length = 701
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 299/520 (57%), Gaps = 15/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F+EA +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFQEADEAPEVTAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGTALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHYIVDELFEGD-LIEAGL 183
Query: 195 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G+ +E ++F E + L+H FFA+R K+ ++ +D+ PR +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDV--TPRPIRTAA 299
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG GIA + + V L E+N E L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANAGVPVKLLEINDEALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALIAGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 GFTRRPEDVVGMHFFSPANVMRLLEVVRGERTSDEVLAAAMAIGKQLKKVSVVVGVCDGF 479
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|407713391|ref|YP_006833956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407235575|gb|AFT85774.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 692
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 290/523 (55%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A ++AIVLTG G FSGG DI F
Sbjct: 6 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQRDPAIRAIVLTGAGKAFSGGADITEFN 65
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 66 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 119
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + S++ GL D +V + L +
Sbjct: 120 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVDSQKLAGSGLFDELVEGD-LAE 178
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + R A ++ AR A + P C+D +
Sbjct: 179 AALAFARKVGAQAGPHPKVRERKI---DHPNAEGFIQFARNSVAAVAKHFPAPLKCIDAV 235
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +R+
Sbjct: 236 EAGVKHGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRR 293
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA + I V L E E L +G+ TI N V +GKL
Sbjct: 294 VAVIGAGTMGGGIAMNFVNAGIPVTLLETKQEALQRGLATIRGNYEASVKKGKLKAGALE 353
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N
Sbjct: 354 ARMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVNR 413
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR T+ V+ +M + K I+K VV G C
Sbjct: 414 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGRETAKDVLATVMKLAKQIRKTAVVSGVCD 473
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 474 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 516
>gi|146280495|ref|YP_001170648.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
gi|145568700|gb|ABP77806.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
Length = 701
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/520 (38%), Positives = 299/520 (57%), Gaps = 15/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F +A +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFRQADEAPEVTAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGSALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHHIVDELFEGD-LIEAGL 183
Query: 195 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G+ +E ++F E + L+H FFA+R K+ ++ +D+ L+P +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDVKLRP--IRTAA 299
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG GIA + + V L E+N E L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANTGVPVKLLEINDEALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALIAGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 AFTKRPEDVVGLHFFSPANVMRLLEVVRGERTSDEVLATAMAIGKQLKKVSVVVGVCDGF 479
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|121608757|ref|YP_996564.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121553397|gb|ABM57546.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Verminephrobacter eiseniae EF01-2]
Length = 699
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 298/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + GL D A + V AIV+TG G FSGG DIN F
Sbjct: 11 VAVITMANPPVNGLGLATRQGLVDGLLRADADAAVSAIVITGAGSAFSGGADINEFGTDK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A + L+ V+ +IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP ++ LP
Sbjct: 71 SAQEPHLLS------VIAVIENSSKPVVAALHSVAMGGGLELALGCHYRIAAPSCRIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR +G+ A+ +++ +S+ SE G KL +D + TS +
Sbjct: 125 EVKLGLIPGAGGTQRLPRALGVEAALNLIVSGESVNSEMIGALPGQKL--LDKLSTSAQA 182
Query: 190 LKVSRLWALD--IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L AAR P +R+L E + + AR K + N P C
Sbjct: 183 LAAEALAFAQGVAAARPLPLVRNLPCRH-----PEGQAYFQFARNMVKGMSRNFPAPALC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E +F +L+ SR L H+F A+RA SK+P+V + R
Sbjct: 238 VDAVEAATRGPFADGMQIERAIFMKLMQTPESRALRHLFMAERAASKIPDVPSDTPR-RD 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+R VAVIG G MG GIA + + V + E+ + L +G+ TI N V +GKLTQD
Sbjct: 297 IRAVAVIGAGTMGGGIAMNFLNAGLPVKILEMKPQALERGLATIGKNYEAQVKKGKLTQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L LDY++ +D D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLDYADIRDADLVIEAVFEDLGVKESVFRQLDAQMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 417 IDKIATFTGRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVAG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGCTPEQVDKAIEKFGFAMGPFRMG 524
>gi|337279644|ref|YP_004619116.1| 3-hydroxybutyryl-CoA epimerase [Ramlibacter tataouinensis TTB310]
gi|334730721|gb|AEG93097.1| 3-hydroxybutyryl-CoA epimerase-like protein [Ramlibacter
tataouinensis TTB310]
Length = 700
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 293/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + L E+A + VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITMNNPPVNGLGLATRVALTQGLEKANADGSVKAIVITGAGKAFSGGADIKEFGTPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ +E+ KP+VAA+ +A+GGGLEL++GCH RIAAP + LP
Sbjct: 71 AVAEPNLLS------VILAMENSSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGANIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ M++ + + SE G KL D + +S +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLAQQPGQKL--FDKMASSAQA 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L+ L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LQEEALAFARSVADTRPLPLVRNLPCKHPQGD-----AYFQFARNMVKGMAKNFPAPVKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V + R
Sbjct: 238 VDAVEFATRKKFDEGMTLEREIFTNLMFTPESRALRHIFMAERAASKIPDVPE-DTPQRE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++ VAVIG G MG GI+ + I V + E+ E L +GI TI N + +GKL QD
Sbjct: 297 IKAVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGISTIRKNYEAQIKKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +LK LDY + D+VIEAV E + +KQK+F L+ ILA+NTST+D
Sbjct: 357 KYEQRMSLLKTTLDYQDLAQADLVIEAVFEEMGVKQKVFETLDGVMKKGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K IKK VV G
Sbjct: 417 VNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGGKTAKDVLATVMQLAKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMG 524
>gi|421616221|ref|ZP_16057236.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
gi|409781796|gb|EKN61371.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
Length = 701
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 304/528 (57%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV D +A+IT+ NPPVNAL + AGL F++A + V+A++L G F G
Sbjct: 5 VRLEVQGD-IALITVSNPPVNALGHAVRAGLLQAFQDAETDSRVRAVILICQGSTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V++ IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIDTIESCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL G++KA++M++ + I++ E + +ID +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMIVSGQPISAAEALEHTIIDELFE 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 244
E L +A + + RS +T L G+ +EA +++ + K P +
Sbjct: 176 GE-LAAAGIGFARRLLDDGRGPRRSGEQTRGLEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+ +E + G+ +E ++F E + LVH FFA+R SK+ N +K
Sbjct: 233 LRCVAAVEAAVKLPLAEGLKRERELFVECLNSPQRGALVHSFFAERQASKI-NDLPADVK 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + AVIGGG MG GIA + + V L E+N + LL+G++ V RG L
Sbjct: 292 PRAINSAAVIGGGTMGVGIALSFANAGLPVKLLEINEDALLRGLQRARDTYAASVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T++ L ++ GV DY D D+V+EAV E + +K+++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMEKRLSLVTGVTDYGALADADVVVEAVFEDMDVKRQVFEQLDAVCKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DLN + T ++G HFFSPA+VM LLE+VR E+TS V+ M +GK +KKV V
Sbjct: 412 SLDLNAIATFTKRPQDVVGLHFFSPANVMRLLEVVRGEKTSDDVLATAMAIGKQLKKVSV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|385209669|ref|ZP_10036537.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385182007|gb|EIF31283.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 694
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/523 (38%), Positives = 294/523 (56%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKATQEPTLA------TVIRTVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVMSEKLADSGLFDELAQGD-LAE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + D+ A ++ AR A ++P C+D +
Sbjct: 181 AALAFARKVGAKEGPHPKV---RDRKIEHPNAAGFIQFARNSVAAVAKHLPAPHKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ +G G+ E + F LV SR L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQNGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RDIDQ 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETKQEALDRGLATIRKNYEASVRKGKLKPEALE 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + K+ D+++EAV E + +K+++F L++ P ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVDK 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIRKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ GV ++D AI FG +GPF+
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGVLPAQVDRAIEKFGFAMGPFR 518
>gi|299066775|emb|CBJ37969.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CMR15]
Length = 693
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 288/525 (54%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVRAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ ++ SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAVPSEQLAKSGLFDQMIEGD-LMA 180
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +AL AA K P +R D+ L+ AR A N P C+D
Sbjct: 181 GAIGFALKAAAEGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + G+ E +F LV SR L H FF +RA SK+P+V + R V
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIALVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVET 294
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA + I V + E E L +GI TI N +GKLT +K
Sbjct: 295 VAVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGIATIRKNYENSAKKGKLTPEKVE 354
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +LK L Y + +D D+V+EAV E + +K+ +F L+ P ILA+NTST+D++
Sbjct: 355 ARMALLKPTLSYDDIRDADLVVEAVFEDMGVKETVFKTLDAVAKPGAILASNTSTLDVDR 414
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IAGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMG 519
>gi|89901163|ref|YP_523634.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89345900|gb|ABD70103.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 699
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 292/526 (55%), Gaps = 17/526 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVN L L D +A + VKAIV+TG G FSGG DI F
Sbjct: 11 IAVLTLNNPPVNGLGYATRLALTDGLAKADADASVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + + ++ V+ +IE+ KP++AA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GSPTALQEPNLLSVILMIENSSKPVIAAIHSVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL---GLIDAVVTSEE-LL 190
E+ LG++PG GGTQRLPR +G+ A+ M++ + + SE L L + + TS E L
Sbjct: 125 EVKLGLVPGAGGTQRLPRALGVEPALNMIVSGEPVKSELLAMLPGQQLFNKMATSNESLA 184
Query: 191 KVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ + L+A +A R P +R+L G + AR + N P C+D
Sbjct: 185 EEALLYARSVAETRPLPLVRNLPCKHPQGD-----AYFQFARNMVGGMSKNFPAPLKCVD 239
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
V++ G+L E + F L+ R L H+F AQRA SK+P+V+ R +
Sbjct: 240 VVQAATTKKFDDGMLFERESFINLMWTPECRALRHIFMAQRAASKIPDVS-ADTPQRAIN 298
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
VA+IG G MG GI+ + I V + E+ E L +GI TI N V +GKL QDK
Sbjct: 299 SVAIIGAGTMGGGISMNFLNAGIAVKILEMKQEALDRGIATIRKNYEAQVKKGKLKQDKY 358
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + KD DMVIEAV E + +K+ +F EL++ P ILA+NTST+D+N
Sbjct: 359 EQRMSLLSTTLSYDDLKDADMVIEAVFEEIGVKEAVFKELDRVMKPGAILASNTSTLDVN 418
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE++R E+T+ V+ +M + K IKK VV G C
Sbjct: 419 KIASFTKRPQDVVGMHFFSPANVMKLLEVIRGEKTAKDVLATVMALAKKIKKTAVVSGVC 478
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR Y + L+ G ++D A+ FG +GPF+ G
Sbjct: 479 DGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAVEKFGFAMGPFRMG 524
>gi|300704070|ref|YP_003745672.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
gi|299071733|emb|CBJ43057.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
Length = 693
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 286/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMLKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HTVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + +D D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKKLDEVAKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ +FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFGFAMGPFRMG 519
>gi|239815901|ref|YP_002944811.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239802478|gb|ACS19545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 701
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 299/530 (56%), Gaps = 23/530 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITMTNPPVNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILALEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS-EE 188
E+ LG+IPG GGTQRLPR++G+ A+ M++ +S+ SE G KL D + S E
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGESVKSELLAGLPGQKL--FDKLAASPES 182
Query: 189 LLKVSRLWALDIAARRK---PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + + +A +A + P +R+L G + A+ + N P
Sbjct: 183 VFEEALAFAKSVAGKTGDALPLVRNLPCKHPQGD-----AYFQFAKNMVGGMSKNYPAPL 237
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
C+D ++ G+ +E ++F L+ S L H+F A+RA SK+P+V + K
Sbjct: 238 KCVDAVQAATKMKFDEGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVPEDTPK- 296
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R V+ V VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL
Sbjct: 297 REVKSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYESQVKKGKLK 356
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDK + +L LDY++ KD D++IEAV E + +K+K+F EL++ ILA+NTST
Sbjct: 357 QDKYEQRMALLSTTLDYNDLKDADLIIEAVFEELGVKEKVFKELDRVAKKGAILASNTST 416
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + T ++G HFFSPA+VM LLE+VR + TS V+ +M +GK IKK VV
Sbjct: 417 LDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATSKDVLATVMDIGKKIKKTAVV 476
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 477 SGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMG 526
>gi|99080201|ref|YP_612355.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
gi|99036481|gb|ABF63093.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
Length = 696
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 303/529 (57%), Gaps = 18/529 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +E+ +D +A+I + NPPVNAL+ + GL F+E RDDVKA V+ G F G
Sbjct: 5 VLLEITDD-IAVIAIANPPVNALSHSVRQGLDAAFDEIARRDDVKAAVIYGTDRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +PD+ +N IE C P+VAA+ G ALGGGLE+A+G H RIA
Sbjct: 64 DIREFGK---PPQEPFLPDL-----INRIEACAVPVVAALHGTALGGGLEVALGAHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P + GLPE+TLG++PG GGTQRLPRL G+ A+E + + I +EE G+ID +
Sbjct: 116 VPSARFGLPEVTLGILPGAGGTQRLPRLAGVEFALEAITSGRQIGAEEALAAGVIDRISD 175
Query: 186 SEELLKVSRLWALD-IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ ++ ++ +A + IA+ +P RT + + +V + AR + K A
Sbjct: 176 TADIREMGLSYARELIASGAQP-----RRTSDIAPEPVSPDVFEQARAKLAKKARGQLAP 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
Q C+ +E + G+ E +F+EL+ D L+H FFA+R +KVP + G++
Sbjct: 231 QNCVKAVEGALSLPFAEGLANERALFQELMESDQRAALIHAFFAERQVAKVPEIN--GVE 288
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + ++ VIGGG MG+GIA + +L + V L E ++E + + + ++G V RGKL
Sbjct: 289 PRAISRIGVIGGGTMGAGIAVSALLAGLQVTLIERDAEAVSRAETNVAKILQGSVKRGKL 348
Query: 365 TQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
TQ+K + ++ + +Y+ D+VIEAV ES+ +K+++F++L+ C P +LA+NT
Sbjct: 349 TQEKFDAIMREAFEASAEYATLATADVVIEAVFESMEVKKEVFTKLDAICKPGAVLASNT 408
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + T+ +IG HFFSPAHVM LLEIV + T+ V + K +KKV
Sbjct: 409 SYLDVNEIAAMTTRPQDVIGLHFFSPAHVMRLLEIVVADETAPDVTATGFALAKRLKKVA 468
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V G C GF NR Y ++ V G F +D A+ +FGL +GP+
Sbjct: 469 VRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVNFGLAMGPY 517
>gi|421897544|ref|ZP_16327912.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
gi|206588750|emb|CAQ35713.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
Length = 693
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 284/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMG 519
>gi|333915071|ref|YP_004488803.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333745271|gb|AEF90448.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 699
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 304/539 (56%), Gaps = 24/539 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + ++A S VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLSTRRGIVEGLDKAYSDPAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN F K + L+ ++N ++ KP+VAA+ + +GGGLELA+GC+ R+
Sbjct: 61 ADINEFGKEEAYREPHLVS------LINSLDQGSKPVVAAIHTVCMGGGLELALGCNYRV 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ + + SE G KL
Sbjct: 115 AAPGTLVALPEVKLGLLPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASIPGQKL-- 172
Query: 180 IDAVVTS-EELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237
D + S E LL ++ +AL++A +R P +R L G + AR K
Sbjct: 173 FDKMAASPESLLDEAKAFALEVADKRPLPRVRDLPCKHPQGD-----AYFQFARNMVKGM 227
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
A N P C+D +E G+ E F +L+ SR L H+F A+RA SK+ +
Sbjct: 228 AKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAASKIAD 287
Query: 298 V-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
V +D + R ++ V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 288 VPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYE 345
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V +GKLTQ+K + + +L L Y K+ D++IEAV E + +K+ +F +L++ P
Sbjct: 346 AQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDEVAKPG 405
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +
Sbjct: 406 AILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATVMKLA 465
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGPFRMG 524
>gi|319762270|ref|YP_004126207.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330825800|ref|YP_004389103.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317116831|gb|ADU99319.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329311172|gb|AEB85587.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 699
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 300/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D E A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLDTRRGIVDGLERAQADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V++ +E+C KP+VAA+ G+ +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTEKSLQEPNLHSVISAVENCAKPVVAAIHGVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEFIGAVPGQKL--FDRMAASPES 182
Query: 190 LKVSRL-WALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A AR P +R+L E + AR K A N P C
Sbjct: 183 LPEEALAFARSVAEARPLPLVRNLP-----CKHPEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATRRKFADGLQYERELFINLMWTPESRALRHLFFAERAASKIPDVPSDTPK-RD 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++KV VIG G MG GI+ + I V + E+ E L +GI TI N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIATIRKNYEAQVKKGKLKED 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + KD D++IEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLSYDDLKDCDLIIEAVFEELGVKEAVFRQLDQVAKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 417 VDRIAAFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YSQ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPSQVDKAIERFGFAMGPFRMG 524
>gi|209963882|ref|YP_002296797.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
gi|209957348|gb|ACI97984.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
Length = 698
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 205/523 (39%), Positives = 293/523 (56%), Gaps = 16/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I + NPPVNAL+ + GL D + D +A+VL G G F G DI F
Sbjct: 13 VGVILVENPPVNALSQAVRQGLLDALRQGLEDDGARALVLAGGGRTFIAGADIAEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD++ V+ E KP+VAA+ G ALGGGLE+A+GCH R+A K +GLP
Sbjct: 69 --GRPLAPPDLND--VIAAFEGAAKPVVAAIHGTALGGGLEVALGCHYRVAVAKAMVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRLVG A+ M+ + + + + +LG++DA+V + + R
Sbjct: 125 EVKLGILPGAGGTQRLPRLVGAHVALTMITSGEFVPAPKAHELGILDAIVEGDPVDGAVR 184
Query: 195 LW-ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
ALD+A P+ R R +++ + V R +KTA + Q C+D ++
Sbjct: 185 FAEALDLAG---PYPRVRDRAERIAA-DRGSAVFDEKRRALEKTARGLFAPQRCVDAVQA 240
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G+ +E ++F + + S L+HVFFA+RA K+P+V D +P V A
Sbjct: 241 AAELPFEEGLKRERELFGQCMAHPQSAALIHVFFAERAIGKIPDVPADTPARP--VATAA 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG GIA I V L E + E L +G+ TI N G V +G+LTQ + +
Sbjct: 299 VLGAGTMGGGIAMNFANAGIPVTLLETSQEALDRGLATIARNYAGTVAKGRLTQAEMDRR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ LD + DMV+EAV E + +KQ +F L+ P +LATNTST+D++ +
Sbjct: 359 LSLITPTLDMAALAGADMVVEAVFEDMAVKQDVFRRLDTVAKPGAVLATNTSTLDIDAIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS +IG HFFSPA+VM LLE+VR T+ VI M G+ I KV V+VGNC GF
Sbjct: 419 AVTSRPADVIGMHFFSPANVMKLLEVVRGSATARDVIATAMQTGRKIGKVSVLVGNCDGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR PYS+ A LLV G ++D A++ +G+ +GPF G
Sbjct: 479 VGNRMLMPYSRQAELLVEEGAWPEQVDKALQDWGMAMGPFAMG 521
>gi|121594055|ref|YP_985951.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidovorax sp. JS42]
gi|120606135|gb|ABM41875.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
Length = 699
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 300/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D + A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRQGIVDGLDRAQADAAVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+N +E+C KP+VAA+ + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKSLQEPNLHSVINAVENCTKPVVAAIHTVCMGGGLELALGCHYRVAAPGCNVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEMIGAVPGQKL--FDKMAASPES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A R P +R+L E + AR K A N P C
Sbjct: 183 LAEEALAFAQSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIPDVPSETPK-RD 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++KV VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYEAQVKKGKLKED 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L+Y++ KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 417 VDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALAKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YSQ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMG 524
>gi|421888133|ref|ZP_16319245.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
gi|378966523|emb|CCF95993.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
Length = 693
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 284/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HTVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPRLR-----DRKVEHDNPEGFLQFARNTVAAVARNFPAPGKCVDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V +V
Sbjct: 237 QAAVEKRFDDGIKFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVERV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGVATIRKNYENSAKKGKLTQEKVEA 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKEAVFKTLDEVAKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T V+ +M K IKK VV G C G
Sbjct: 416 AGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATGKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ +FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFGFAMGPFRMG 519
>gi|149378483|ref|ZP_01896167.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
gi|149357234|gb|EDM45772.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
Length = 697
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 283/518 (54%), Gaps = 10/518 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ D K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLVAALEQGQKDADAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M D + VV+ E+ KPI+AA+ G ALGGGLE A+GCH R+A ++GLP
Sbjct: 72 -------MQDPGLPSVVDQYENSDKPIIAAIHGTALGGGLETALGCHYRVALSSAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G KA+EM+ + + +++ L ++DAV ++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEMITTGEFVGAKDALALSIVDAVEDGSDIKAAGL 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A +A KP R TDKL + + +V + R +K A + C+D +E
Sbjct: 185 AYAQKVADEGKPVRRVRDLTDKLQA-DKGSDVFEQFRAGLQKKARGLFSPFKCVDAVEAA 243
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
GV +E ++F E + GLVH FFA+R SKV ++ R +R V VI
Sbjct: 244 FSLPFEDGVKRERELFMECMESPQRAGLVHSFFAEREVSKVKGLSK-DTPVRDIRTVGVI 302
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA I V + EV E L KG+ I N +G++TQ + +
Sbjct: 303 GAGTMGGGIAMNFANAGIPVTIAEVKQEALDKGLAVIRRNYENTAKKGRITQAQVEERMS 362
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
++ G L Y +F DVD+VIEAV ES LK+KIF +L+ AC P ILA+NTST+ ++ +
Sbjct: 363 LISGTLTYDDFSDVDLVIEAVFESRDLKRKIFGQLDDACKPGAILASNTSTLSIDDIAAA 422
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T +IG HFFSPA+VM LLEIVR E+TS +V M + K I+KV V+VGNC GF
Sbjct: 423 TKRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVKATAMALAKKIRKVGVMVGNCYGFVG 482
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR A LV+ G ++D + G P+G F
Sbjct: 483 NRMLHKRGAEAMALVNEGASPQQVDKVLTDLGFPMGQF 520
>gi|83748601|ref|ZP_00945620.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|207743140|ref|YP_002259532.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
gi|83724725|gb|EAP71884.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|206594537|emb|CAQ61464.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
Length = 693
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 284/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V + E E L +GI TI + +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKSYENSAKKGKLTQEKVEA 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMG 519
>gi|386333461|ref|YP_006029631.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
gi|334195910|gb|AEG69095.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
Length = 1292
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 285/524 (54%), Gaps = 12/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 607 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 666
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 667 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 720
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 721 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIDGDLMAG 780
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A + P +R D+ L+ AR A N P C+D +
Sbjct: 781 AIAFAKQAAADGKLPKLR-----DRQVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 835
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 836 QAAVEKRFDDGLKFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 894
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 895 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 954
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +LK L Y + +D D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 955 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKKLDEVAKPGAILASNTSTLDVDRI 1014
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 1015 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 1074
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 1075 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMG 1118
>gi|418293237|ref|ZP_12905154.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064637|gb|EHY77380.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 701
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/528 (37%), Positives = 302/528 (57%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL + F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQVVREGLLNAFQRAEADQQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEVIEGCNKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL G+ KA++M++ I + E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALDMIVSGTPIGAAEAVEHHIVDELFE 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 244
+ L + +A + + R+ +T + G+ +EA +++ + K P +
Sbjct: 176 GD-LREAGLAYARRMVGEGRAPRRTGEQTRGIEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+ +E G+ +E ++F E + LVH FFA+R K+ +++ +K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLS-AAVK 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + AVIGGG MG GIA + + V L E+N + L +G++ V RG L
Sbjct: 292 PRSINTAAVIGGGTMGVGIALSFANAGVPVKLLEINEQALQRGLQRTRETYAASVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+D L ++ GV DY+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEDAMEQRLALITGVTDYAVLADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DLN + T + ++G HFFSPA+VM LLE+VR E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|398809677|ref|ZP_10568520.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398085084|gb|EJL75749.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 702
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 295/531 (55%), Gaps = 24/531 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 IAVITLTNPPVNGLGFSTRIGITDGLSKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILALEASAKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS--- 186
E+ LG+IPG GGTQRLPR++G+ A+ M++ + + SE G KL D + S
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASLPGQKL--FDKLADSPES 182
Query: 187 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+E + +R A A P +R+L G + A+ + N P
Sbjct: 183 VFDEAVAFARSVAGKTGADALPLVRNLPCKHPQGD-----AYFQFAKNMVGGMSKNYPAP 237
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+D ++ +G+ +E ++F L+ S L H+F A+RA SK+P+V + K
Sbjct: 238 LQCVDAVQAATKMKFDAGMAEERRIFTSLMFTPESLALRHLFMAERAASKIPDVPEDTPK 297
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R ++ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL
Sbjct: 298 -REIKAVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKL 356
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
QDK + +L L Y + KD D++IEAV E + +K+K+F EL++ ILA+NTS
Sbjct: 357 KQDKYEQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAILASNTS 416
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
T+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK V
Sbjct: 417 TLDVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKIKKTSV 476
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
V G C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 477 VSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMG 527
>gi|163792916|ref|ZP_02186892.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
gi|159181562|gb|EDP66074.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
Length = 699
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 290/518 (55%), Gaps = 8/518 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVN L + AGL+ F + + DV AIV+ G G FS G DI F K
Sbjct: 12 IAVVRLDNPPVNGLGAAVRAGLEAAFNDLLADSDVSAIVIAGAGRMFSAGADIKEFGKTP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+V +P++ ++ +E KP+VAA+ G+A GGGLELA+GCH RIAAPKT++GLP
Sbjct: 72 PT-NVPNLPEL-----IDWLEASIKPVVAAIHGVAAGGGLELALGCHYRIAAPKTRVGLP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GGTQRLPR+ G+ A+++++ + ++ E KLG+IDA+ + L+ +
Sbjct: 126 EVTLGILPGAGGTQRLPRVAGVEAALDLIVSGRLVSEREALKLGMIDAIADGD-LIDAAV 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
A+++A + RS +D L + R +K A M AC+ IE
Sbjct: 185 AKAIELADVGENPRRSSTLSDGLTEAQANPGLFDAFRKSMEKRARGMNAPYACVRCIEAA 244
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G E + FK LV +R + H FFA+R SK+P+V D + + VI
Sbjct: 245 TRLPFAEGRRFEHEEFKALVTAVEARAMRHAFFAEREVSKIPDVPD-STPTQPIESAGVI 303
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA I V + E + L G+ I AN + V +G+++Q + +
Sbjct: 304 GCGTMGGGIAMVFANAGIPVTIVESDEGALDNGLTKIRANYQATVDKGRMSQQAMDERMA 363
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ G D++ D D+V+EAV E + +KQ++F L+ C P +LATNTST+D++ +
Sbjct: 364 SITGATDFAAIADADIVVEAVFEEMAVKQQVFRSLDGICQPDVVLATNTSTLDVDTIAAA 423
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T + +IG HFFSPA+VM LLE+VR ++S Q I M + K + KV V+VG C GF
Sbjct: 424 TGRPESVIGTHFFSPANVMRLLEVVRGAKSSPQTIATAMGLSKTLGKVGVLVGVCDGFVG 483
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR Y + A LV G +D I FG P+GPF
Sbjct: 484 NRMLHQYLREAAFLVEEGALPQDVDRVIFEFGFPMGPF 521
>gi|91783541|ref|YP_558747.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91687495|gb|ABE30695.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
Length = 694
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 197/523 (37%), Positives = 291/523 (55%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPGIEAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVMSEKLADSGLFDELAQGD-LAE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + D+ A ++ AR A + P C+D +
Sbjct: 181 AALAFARKVGAKEGPHPKL---RDRRIEHPNAAGFIQFARNSVAAVAKHFPAPHKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ +G G+ E + F LV SR L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQNGFDKGLAFERECFIALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RDINQ 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETRQEALDRGLATIRKNYEASVRKGKLKPEALE 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + K+ D+++EAV E + +K+++F L++ ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELDVKEQVFRRLDEVAKQGAILASNTSTLDVDR 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGRETAKDVLATVMKLAKKIRKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFR 518
>gi|260219460|emb|CBA26305.1| Peroxisomal bifunctional enzyme [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 707
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 291/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL +PPVN L + G+ D +A + VKAIV+TG G FSGG DI F
Sbjct: 19 IAVITLNHPPVNGLGLTTRQGIADGMAQANADAAVKAIVITGAGKAFSGGADITEF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ ++E KP+VAA+ +A+GGGLELA+GCH RIAAP T + LP
Sbjct: 75 --GSPKALQEPNLISVIKVLESSAKPVVAAIHTVAMGGGLELALGCHYRIAAPGTSIALP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR++G+ A+ M++ + + SE G KL D + S E
Sbjct: 133 EVKLGLVPGAGGTQRLPRVLGVEPALNMIVSGEPVKSEMLAMLPGQKL--FDKLSASPES 190
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A R P +R L G + AR K + N P C
Sbjct: 191 LAEEALAFARSVADVRPLPLVRDLKCKHPQGD-----AYFQFARNMVKGMSKNFPAPAKC 245
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+DV+E G+ E + F L+ S+ L H+F A+RA SK+ +V R
Sbjct: 246 VDVVEAATKKKFDEGMQVEREAFINLMFTAESKSLRHLFLAERAASKIADVPS-DTPQRA 304
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ VAVIG G MG GIA + I V + E+ E L +GI TI N V + KL QD
Sbjct: 305 INSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIRKNYEAQVVKKKLKQD 364
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + DMVIEAV E + +K+ +F EL++ P ILA+NTST+D
Sbjct: 365 KYEQRMSLLSTTLSYDDLTGTDMVIEAVFEELGVKEAVFKELDRVMKPGAILASNTSTLD 424
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T + ++G HFFSPA+VM LLE+VR E+T+ V+ +M+V K IKK VV G
Sbjct: 425 VNKIANFTQRPEDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMSVAKKIKKTAVVSG 484
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y + L+ G ++D A+ FG+ +GPF+ G
Sbjct: 485 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMERFGMAMGPFRMG 532
>gi|392423205|ref|YP_006459809.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
gi|390985393|gb|AFM35386.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
Length = 701
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/528 (36%), Positives = 303/528 (57%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +E+ D +A+IT+ NPPVNAL + GL F++A + V+A+ L G F G
Sbjct: 5 VRLEIQGD-IALITVNNPPVNALGQAVREGLLKAFQQAEADQQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEVIEGCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL G+ KA++M++ I++ + + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALDMIVSGTPISAAKAVEHSIVDELFE 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ L+ +A + + R+ +T L S ++ +++ + K P +
Sbjct: 176 GD-LVNAGLAYARRMVDEGRAPRRTGEQTRGLDS-ADNEALIRAKHAEVAKRMPGLFSPL 233
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 304
C+ +E G+ +E ++F E + LVH FF++R K+ ++ +D+ K
Sbjct: 234 RCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFSERQAGKINDLPSDV--K 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++ AVIGGG MG GI + + V L E+N E L +G++ V RG L
Sbjct: 292 PRSIKTAAVIGGGTMGVGITLSFANAGVPVKLLEINDESLQRGLQRARDTYAASVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T++ L +++GV +Y+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMEQRLALVEGVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DL+ + T + ++G HFFSPA+VM LLE+VR E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|160898754|ref|YP_001564336.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160364338|gb|ABX35951.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 703
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 303/543 (55%), Gaps = 28/543 (5%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + ++A S VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLSTRRGIVEGLDKAYSDPAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN F K + L+ ++N ++ KP+VAA+ + +GGGLELA+GC+ R+
Sbjct: 61 ADINEFGKEEAYREPHLVS------LINSLDQGSKPVVAAIHTVCMGGGLELALGCNYRV 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ + + SE G KL
Sbjct: 115 AAPGTLVALPEVKLGLLPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASIPGQKL-- 172
Query: 180 IDAVVTS-EELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQ 233
D + S E LL ++ +AL++A + P +R L G + AR
Sbjct: 173 FDKMAASPESLLDEAKAFALEVADKHAAGGPLPRVRDLPCKHPQGD-----AYFQFARNM 227
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
K A N P C+D +E G+ E F +L+ SR L H+F A+RA S
Sbjct: 228 VKGMAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAAS 287
Query: 294 KVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352
K+ +V +D + R ++ V VIG G MG GI+ + I V + E E L +G+ TI
Sbjct: 288 KIADVPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIR 345
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
N V +GKLTQ+K + + +L L Y K+ D++IEAV E + +K+ +F +L++
Sbjct: 346 KNYEAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDEV 405
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
P ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +
Sbjct: 406 AKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATV 465
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
M + K IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF
Sbjct: 466 MKLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGPF 525
Query: 533 QEG 535
+ G
Sbjct: 526 RMG 528
>gi|393776994|ref|ZP_10365288.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
gi|392716351|gb|EIZ03931.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
Length = 698
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/530 (39%), Positives = 295/530 (55%), Gaps = 23/530 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVAIITL NPPVN L + G+ + + A + V+AIVLTG G FSGG DI F
Sbjct: 8 QDGVAIITLANPPVNGLGLATRQGIMEGLQRAAADASVRAIVLTGAGKAFSGGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + + V+ IE KP+VAAV +A+GGGLELA+GCH R+AAP Q+
Sbjct: 67 -----GTSKALEEPILVSVIAAIEHSPKPVVAAVHSVAMGGGLELALGCHYRLAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--- 188
LPE+ LG++PG GGTQRLPR+ GL A++M+ + SE+ D +V S +
Sbjct: 122 ALPEVKLGIMPGAGGTQRLPRVAGLEAALDMITTGAVVRSEQLAGTRTFDRIVESSQPAD 181
Query: 189 LLKVSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
LL + +A ++ R P +R L+ +A L AR + + P
Sbjct: 182 LLAEAVAFAREVGTRPGPHPLVRDLNI-----EAPDAEGRLAAARAAIAARSAHFPAPLK 236
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK---VPNVTDIGL 303
C++ +E + +G+ E + F L+ SR L H FF +RA K VP+ T +
Sbjct: 237 CIEALEAAVRLPFEAGLKVEREAFLFLLTTPESRALRHAFFGERAAGKIADVPSATPV-- 294
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + KVAVIG G MG+GIA + + V L E E L +G+ TI N V +GK
Sbjct: 295 --RDIHKVAVIGAGTMGAGIAMTFLSAGLPVTLLEARQEALERGVATIRKNYDSTVRKGK 352
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
L+++KA A+ +L+ LDY+ D D+VIEAV E + +K+ +F +L+ P ILA+NT
Sbjct: 353 LSEEKAERAMALLQTTLDYAAIADADLVIEAVFEDMGVKETVFRQLDAVMKPGAILASNT 412
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
ST+DLN + T+ ++G HFFSPA+VM LLE+VR +T V+ +M + K ++K
Sbjct: 413 STLDLNAIAGFTTRPQDVVGLHFFSPANVMKLLEVVRGAQTGKDVLATVMKLAKTLRKTA 472
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV G C GF NR Y + A L+ G +IDSAI FG +GPF+
Sbjct: 473 VVSGVCDGFIGNRMVEQYVRQAGFLLDEGCTPQQIDSAIERFGFAMGPFR 522
>gi|186475793|ref|YP_001857263.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184192252|gb|ACC70217.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 694
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 287/522 (54%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A+ITL NPPVN L + G+ + + A VKAIVLTG G FSGG DI F
Sbjct: 8 HDGIAVITLNNPPVNGLGLSTRMGIVEGIDRAQHDPAVKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKAFQEPTLA------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ + D +V LL+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPMFDQMVEGN-LLE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A + A+ P + R +G A ++ AR A P C+D I
Sbjct: 181 DALAFARKVGAQSGPHPKIRDRN--IGH-PNAAGFIQFARNSVAGVAKQYPAPHKCIDAI 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E G++ G GV E + F LV S+ L H FF +RA SK+P+V R + KV
Sbjct: 238 EAGVLKGFDHGVKVERECFLALVQTPESKALRHAFFGERAASKIPDVPS-DTPARNIDKV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA + + V L E+ + L +G+ TI N V +GKLT +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLEMKQDALERGLATIRKNYEATVKKGKLTMEALEQ 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y D D++IEAV E + +K+++F+ L++ P ILA+NTST+DLN +
Sbjct: 357 RMSLITPTLTYEALGDADLIIEAVYEELGVKEQVFTRLDEVAKPGAILASNTSTLDLNKI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMQVAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 477 FIGNRMVEQYVRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 518
>gi|187923916|ref|YP_001895558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715110|gb|ACD16334.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 694
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 290/523 (55%), Gaps = 13/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGVERAQNDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP++AA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKAGQEPTLA------TVIKIVEGSAKPVIAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVMSEKLADSGLFDELAQGD-LAE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A ++A+ P + D+ A ++ AR A N P C+D +
Sbjct: 181 AALAFARKVSAKEGPHPKV---RDRKIEHPNAAGFIQFARNTVATMAKNFPAPLKCIDAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E G+ G G+ E + F LV S L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQKGFDKGLAFERECFMALVQTPESHALRHAFFGERAASKIPDVPSDTPV--RDIGQ 295
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETKQEALDRGLATIRKNYEATVKKGKLKPEVLG 355
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ L Y + K+ D+++EAV E + +K++ F L++ ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELGVKEQAFKRLDEVAKQGAILASNTSTLDVDK 415
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMNLAKKIKKTAVVSGVCD 475
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 476 GFIGNRMVEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 518
>gi|222111212|ref|YP_002553476.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221730656|gb|ACM33476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 699
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/528 (39%), Positives = 298/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D + A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRQGVVDGLDRAQADAAVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+N +E C KP+VA + + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKSLQEPNLHSVINAVEYCTKPVVAVIHTVCMGGGLELALGCHYRVAAPGCNVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEMIGAVPGQKL--FDKMTASPES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A R P +R+L E + AR K A N P C
Sbjct: 183 LAEEALAFARSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIPDVPSETPK-RD 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++KV VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYEAQVKKGKLKED 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L+Y++ KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 417 VDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALAKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YSQ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMG 524
>gi|431929301|ref|YP_007242335.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
gi|431827588|gb|AGA88705.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
Length = 701
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 301/528 (57%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL+ F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQAVREGLQKAFQSAEADPQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C K VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEIIEACNKSSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL G+ KA+EM++ + I++ E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPISAAEAVEHNIVDELFE 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 244
+ L++ + + + R+ +T L G+ +EA +++ + K P +
Sbjct: 176 GD-LVEAGLAYVRRMVEEGRTPRRTGEQTQGLEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+ +E G+ +E ++F E + LVH FFA+R K+ ++ K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLPS-DTK 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + AVIGGG MG GIA + + V L E+N E L +G++ V RG L
Sbjct: 292 PRSINSAAVIGGGTMGVGIALSFANAGVPVKLLEINEEALQRGLQRARDTYAASVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T+D L +++GV +Y+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEDAMEQRLALIEGVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAICKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DL+ + T + ++G HFFSPA+VM LLE+VR +TS +V+ M +GK +KKV V
Sbjct: 412 SLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGAKTSDEVLATAMAIGKQLKKVSV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPF 519
>gi|339325689|ref|YP_004685382.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
gi|338165846|gb|AEI76901.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
Length = 693
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 290/526 (55%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A +KAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAIKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++ AA P +R L + L AR A N P CL+
Sbjct: 181 AAVKFAQNVGAAAGPHPKVRDLKVRHE-----NPEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKEEREGFLFLVTTPESRALRHAFFGERAASKIPDVPE-GTPTRKIE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KVAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + KD D++IEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKKLDEVAKQGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M +GK IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQIGKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|194289576|ref|YP_002005483.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (n-terminal); 3-hydroxyacyl-CoA
dehydrogenase (c-terminal), partial [Cupriavidus
taiwanensis LMG 19424]
gi|193223411|emb|CAQ69416.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus taiwanensis LMG
19424]
Length = 693
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 290/526 (55%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEASTKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A M++ ++ SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTAVPSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++ A P +R L + A L AR A N P CL+
Sbjct: 181 AAIKFAQNVGAASGPHPKVRDLKVRHE-----NAEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKQEREGFLFLVTTPESRALRHAFFGERAASKIPDVPE-GTPVRKIE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KVAVIG G MG GI+ + I V + E E L +G+ I N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVGVIRKNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + KD DMVIEAV E + +K+ +F +L++ P ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVKEIVFKKLDEVMKPGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR ++T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGDKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|94310793|ref|YP_584003.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Cupriavidus metallidurans CH34]
gi|430809384|ref|ZP_19436499.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|93354645|gb|ABF08734.1| fused 3-hydroxybutyryl-CoA epimerase and
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and
enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|429498193|gb|EKZ96707.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 693
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 206/526 (39%), Positives = 289/526 (54%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKA+V+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGLTRALDDAAVKAVVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KPIVAA+ +A+GGGLELA+GC+ R+AA Q+
Sbjct: 68 TPKATQEPTL------HSVIRALEASTKPIVAAIHSVAMGGGLELALGCNYRVAAKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPRL+GL A+ M++ +I SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRLIGLEHALNMIVSGTAIPSEKFAGSKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A +AA P+ +R L + A L AR A N P C+D
Sbjct: 181 AAVKFAQSVAAAPGPYPKVRDLKVRHE-----NAEGFLAFARNTVAAVAKNFPAPLKCVD 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + +G+ E F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVAASL-KPFEAGLKDERDGFMYLVGTPESRALRHAFFGERAASKIPDVPE-GTPVRKIE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+VAVIG G MG GI + I V + E+ E L +G+ TI N +GKLTQ+K
Sbjct: 294 RVAVIGAGTMGGGITMNFLNAGIPVTMLEMKQEALERGVATIRRNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L + Y + K+ D+VIEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLTTTMSYDDIKNADLVIEAVFEEMGVKETVFKKLDEVMKDGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M +GK IKK VV G C
Sbjct: 414 KIASFTRRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQIGKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|319793843|ref|YP_004155483.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315596306|gb|ADU37372.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 701
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 292/529 (55%), Gaps = 21/529 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITLTNPPVNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILTLEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ M++ + + SE G KL ++E +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVETALNMIVSGEPVKSELLASLPGQKL-FDKLAASAESV 183
Query: 190 LKVSRLWALDIAARRK---PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+ +A +A + P +R+L G + + + N P
Sbjct: 184 FDEAVAFAKSVAGKTGEALPLVRNLPCKHPQGD-----AYFQFTKNMVGGMSKNYPAPLM 238
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
C+D ++ G+ +E ++F L+ S L H+F A+RA SK+P+V + K R
Sbjct: 239 CIDAVQAATKMKFDQGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVPEDTPK-R 297
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL +
Sbjct: 298 EINSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKE 357
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
DK + +L L Y + KD D++IEAV E + +K+K+F EL++ ILA+NTST+
Sbjct: 358 DKYAQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAILASNTSTL 417
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV
Sbjct: 418 DVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKIKKTSVVS 477
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 478 GVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMG 526
>gi|395762316|ref|ZP_10442985.1| 3-hydroxyacyl-CoA dehydrogenase [Janthinobacterium lividum PAMC
25724]
Length = 695
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 291/527 (55%), Gaps = 16/527 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N VA+ITL NPPVN L + +A + + VKAIV+TG G FSGG DI F
Sbjct: 8 NGAVAVITLANPPVNGLGLATRTAAVAGIRQALADEAVKAIVITGAGKAFSGGADIKEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + ++ ++N++E KP+VAA+ + +GGGLELA+GC+ R+AAP Q+
Sbjct: 68 SPKA------LTEPTLHTLINVVESASKPVVAAIHSVCMGGGLELALGCNYRVAAPGAQM 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 190
LPE+ LG++PG GGTQRLPR++GL A+ M++ + SE+ L D V +LL
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRVLGLEMALNMIVSGTPVASEKLAGTALFDEVTAPGADLL 181
Query: 191 KVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ + +A +A R P +R + D + L+ +R K + P C+D
Sbjct: 182 QAAVAFATKVADVRPLPTVRE-RKVDYPNHAA----FLQFSRNTVKAMSGPFPAPLKCVD 236
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 308
+ + G+ E ++F +LV S+ L H FFA+R SKVP+V +D + R +
Sbjct: 237 AVAAAVTMTFDEGLQYERELFMQLVQSPVSKALRHAFFAERLASKVPDVPSDTPV--RAI 294
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
A++G G MG+GIA I V L E E L KG+ TI N V +GKLTQ+K
Sbjct: 295 ASAAIVGAGTMGAGIAMNFANAGIAVTLLETRQEALDKGLATIRKNYENTVKKGKLTQEK 354
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A + ++ G L Y++ D+VIEAV E + +K+ +F +L+ P ILA+NTST+DL
Sbjct: 355 AEQRIALVSGTLAYADIAQADIVIEAVFEELAVKEAVFKQLDAVMKPGAILASNTSTLDL 414
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T +IG HFFSPA+VM LLEIVR +T V+ + + K +KK VV G
Sbjct: 415 DKIAAFTQRPQDVIGTHFFSPANVMKLLEIVRGAQTGKDVLATALALSKKLKKTGVVSGV 474
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 475 CDGFIGNRMIEQYSRQAGFLLEEGCLPEQVDKAVEKFGFAMGPFRMG 521
>gi|449509561|ref|XP_004186281.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal bifunctional enzyme
[Taeniopygia guttata]
Length = 725
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 297/532 (55%), Gaps = 26/532 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ VA+I L NPPVNAL++ ++ L D ++A + VKA+++ G +FS G DI F
Sbjct: 7 SSAVAVIRLCNPPVNALSLAVLQALXDGLKKADADPSVKAVMICGENRKFSAGADIRGFS 66
Query: 72 --KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K H + +L P +V+LIE +KP+VAA+EG+ALGGGLE+A+GCH RIA K
Sbjct: 67 SPKRH---EGALGP------IVSLIESSEKPVVAAIEGVALGGGLEVALGCHYRIAHVKA 117
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
Q+GLPE+T+G++PG GTQRLPRL+GL A++M+ K I + E KLGL+D +V +
Sbjct: 118 QMGLPEVTIGLLPGAEGTQRLPRLIGLPAALDMITTGKHIPATEALKLGLVDEIVEENTI 177
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
RL I P SL +L ++ L+ A ++ KK A + C
Sbjct: 178 EAAIRLANKVIGQPLGPRRLSLKPIPRLPNMEA---FLREALVKVKKQARGCLAPELCFQ 234
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PR 306
+ GV +E ++F+ L+ +R L + FFA+RA + + P+
Sbjct: 235 AVRAAAERPFAEGVRRERELFQVLLTSGQARALQYAFFAERAVRRWATPSGASWSSAAPQ 294
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
VRK AVIG G MG GI T+ + NI +V E + EYL KG K + L+ R +
Sbjct: 295 PVRKAAVIGLGTMGRGIVTSLVKANIPLVALEQDLEYLNKGRKAVML----LLEREAMKM 350
Query: 367 DKANNALKM-----LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
++ AL L+ +D+ VD+VIEAV E++ LK++IF +L K C P +L T
Sbjct: 351 ERGAQALDFHNPARLQFTVDFDLLHHVDLVIEAVFENMALKKEIFHKLSKICKPGALLCT 410
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS ++++ + TS ++IG HFFSPAHVM LLEI+ TS I M + K +KK
Sbjct: 411 NTSALNIDEIASATSCPQQVIGTHFFSPAHVMRLLEIIYGRHTSPTAIATAMQLAKALKK 470
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V VVVGNC GF NR FPY Q A L+ G +D + FG +GPF+
Sbjct: 471 VGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEAVDQVLEDFGFKLGPFR 522
>gi|299533351|ref|ZP_07046734.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298718667|gb|EFI59641.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 699
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 298/537 (55%), Gaps = 20/537 (3%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-- 172
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
+ + S E L A +P R + K + + A + +
Sbjct: 173 FNKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKH---PQGEAYFEFAATMVQGMSK 229
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 230 NFPAPLRCLEAVKNATTKKFDDGMVAERETFMQLMMTPESRSLRHLFMAERAASKIPDVP 289
Query: 300 DIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 290 --GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEAQ 347
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P I
Sbjct: 348 VKKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGAI 407
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 408 LASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGKK 467
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 468 IKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMG 524
>gi|113867537|ref|YP_726026.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
gi|113526313|emb|CAJ92658.1| Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
Length = 693
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 288/526 (54%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++ A P +R L + L AR A N P CL+
Sbjct: 181 AAVKFAQNVGAATGPHPKVRDLKVRHE-----NPEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKQEREGFLYLVTTPESRALRHAFFGERAASKIPDVPE-GTPTRKIE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KVAVIG G MG GI+ + I V + E E L +G+ I N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVGIIRKNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + KD D++IEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKKLDEVAKQGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M VGK IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQVGKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|326317169|ref|YP_004234841.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374005|gb|ADX46274.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 699
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 293/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGHATRKGITDGLARANADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + ++ V+ +E KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKAMQEPNLHSVIRAVEGSAKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSMALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGGMPGQKL--FDKMAASAES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LAEEALAFARSVADTRPLPLVRNLPARHPQGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIPDVPSDTPK-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+RKV VIG G MG GI+ + I V + E E L +G+ TI N V +GKL QD
Sbjct: 297 IRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYEAQVAKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L Y + KDVD+VIEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYEQRMALLTPTLSYDDLKDVDLVIEAVFEEMGVKETVFKKLDEVARPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR ++T+ V+ +M + K IKK VV G
Sbjct: 417 VDQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALAKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YSQ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMG 524
>gi|120611544|ref|YP_971222.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120590008|gb|ABM33448.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
Length = 699
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 293/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGHATRKGITDGLARANADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + ++ V+ +E KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKAMQEPNLHSVIRAVEGSAKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSMALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGGMPGQKL--FDRMAASAES 182
Query: 190 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LAEEALAFARSVADTRPLPLVRNLPAKHPQGDA-----YFQFARNMVKGMAKNFPAPLKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIPDVPSDTPK-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+RKV VIG G MG GI+ + I V + E E L +G+ TI N V + KL QD
Sbjct: 297 IRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYEAQVAKSKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L L+Y + KDVD+VIEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYEQRMALLTPTLNYDDLKDVDLVIEAVFEEMGVKETVFRKLDEVAKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T ++G HFFSPA+VM LLE+VR ++T+ V+ +M + K IKK VV G
Sbjct: 417 VNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALAKKIKKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YSQ A L+ G ++D AI FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMG 524
>gi|418531196|ref|ZP_13097113.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371451698|gb|EHN64733.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 699
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 298/537 (55%), Gaps = 20/537 (3%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-- 172
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
+ + S E L A +P R + K + + A + +
Sbjct: 173 FNKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKH---PQGEAYFEFAATMVQGMSK 229
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 230 NFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTPESRSLRHLFMAERAASKIPDVP 289
Query: 300 DIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 290 --GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEAQ 347
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P I
Sbjct: 348 VKKGKLSEQKYEQRMGLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGAI 407
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 408 LASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGKK 467
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 468 IKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMG 524
>gi|295676535|ref|YP_003605059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436378|gb|ADG15548.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 696
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/526 (38%), Positives = 288/526 (54%), Gaps = 17/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++TL NPPVN L + AG+ + + A + ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVLTLNNPPVNGLGLSTRAGIVEGLDRAQNDPAIEAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AA Q+
Sbjct: 68 TPKATQEPTLA------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAAGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL ++ M++ + SE+ GL D VV + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEASLNMIVSGTPVLSEKLADSGLFDEVVANPAELA 181
Query: 192 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ L + A P +R D+ A ++ AR A N P C+
Sbjct: 182 EAALAFARKVGAQAGPHPKVR-----DRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCI 236
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 307
D +E G+ G G+ E + F LV S L H FF +RA SK+P+V +D + R
Sbjct: 237 DAVEAGVKDGFDKGLAFERECFIALVQTPESHALRHAFFGERAASKIPDVPSDTSV--RD 294
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ +VAVIG G MG GIA + I V L E E L +G+ TI N VT+GKL +
Sbjct: 295 INQVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALDRGVATIRKNYEATVTKGKLKPE 354
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
L +L L Y + K DM+IEAV E + +K+++F L++ P ILA+NTST+D
Sbjct: 355 VMEQRLALLSPTLSYDDLKHADMIIEAVFEELGVKEQVFGRLDEVAKPGAILASNTSTLD 414
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 415 VDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIRKTAVVSG 474
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 475 VCDGFIGNRMIEQYLRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 520
>gi|397688839|ref|YP_006526158.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
gi|395810395|gb|AFN79800.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
Length = 701
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 290/528 (54%), Gaps = 25/528 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+I NPPVNAL + GL F+ A + V+A+VL G F G DI F
Sbjct: 10 RDEIALIIADNPPVNALGQALRQGLLQAFQAAEADPQVRAVVLVCEGSTFFAGADIKEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V+ L V+++IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 70 K----------PPVAPSLPEVIDVIEGCSKPSVAVIHGTALGGGLEVALGCHYRIARADA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-- 187
++GLPE+ LG++PG GGTQRLPRL G++KA++M+L + ++E + L+D + +
Sbjct: 120 KVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMILSGAPVEAKEACEHQLVDELFEGDLV 179
Query: 188 --ELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
L RL D RR R L D +L AR + K +P +
Sbjct: 180 DAGLAYARRLLQEDRGVRRSGEQTRGLEGADN-AALIAARHA------EVVKRSPGLFSP 232
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+ +E G+ +E ++F E + LVH FFA+R SK+ ++ +
Sbjct: 233 LRCIAAVEAATRLPLVEGLARERELFLECLNSPQRAALVHTFFAERQASKIADLP-ADTR 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR +R AVIGGG MG GIA + V L EV+ E L + ++ V RG L
Sbjct: 292 PREIRTAAVIGGGTMGVGIALCFANAGVPVKLLEVSDEALQRALQRARDTYAISVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
++ L +++G+ DY+ DVD+V+EAV E + +KQ++F L+ C P ILA+NTS
Sbjct: 352 SEAAMAQRLALIEGITDYAALADVDLVVEAVFEDMAVKQQVFERLDAVCKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DLN + T ++G HFFSPA+VM LLE+VR +TS +V+ M +G+ +KKV V
Sbjct: 412 SLDLNAIAAFTRRPQDVVGLHFFSPANVMRLLEVVRGAQTSHEVLATAMAIGRKLKKVAV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D+ +R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMLFQYGREAEFLLEEGATPQQVDAVLRNFGMAMGPF 519
>gi|124266965|ref|YP_001020969.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
gi|124259740|gb|ABM94734.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
Length = 700
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 286/522 (54%), Gaps = 17/522 (3%)
Query: 16 AIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75
A+ITL NPPVN L + D A V+AIV+TG G FSGG DI F
Sbjct: 12 AVITLDNPPVNGLGHATRRDVADGLVRAQDDPAVQAIVITGAGRAFSGGADIREFDTPQA 71
Query: 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPE 135
+ +L+ ++ IE KP++AA+ + +GGGLELA+GCH R+AAP Q+ LPE
Sbjct: 72 MREPNLLS------LILAIEASGKPVIAALHTVCMGGGLELALGCHYRVAAPGCQVALPE 125
Query: 136 LTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG---LIDAVVTSEELLKV 192
+ +G+IPG GGTQRLPR++G+ A+ M+L + + SE L L D +V + +
Sbjct: 126 VKIGLIPGAGGTQRLPRVLGVEDALNMILSGEPVASERLAALPGQRLFDRLVEGDLMTGA 185
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
A A R P +R L A + AR A AP P + C+D++
Sbjct: 186 LAFAAEVAARRPLPLVRRL-----TAHHPNADAYFQFARNTATAMAPQFPAPRKCIDMVA 240
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
+ G+ E F L++ SR L HVF A+RA K+ +V D + R V+++
Sbjct: 241 ASVALPFDEGLRLEWSTFTALMLTPESRALRHVFMAERAAGKIADVPADTPV--RSVKRL 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + + VV+ E E L +G+ TI N V +GKLT ++A
Sbjct: 299 AVIGAGTMGGGIAMNFLNAGLPVVMLETKQEALDRGVATIRRNYEAQVKKGKLTAERAEQ 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L +L LDY++ D DMVIEAV E + +K+++F L++ P ILA+NTST+DLN +
Sbjct: 359 RLGLLSTTLDYADLADADMVIEAVFEDLGVKEQVFRRLDEVMKPGAILASNTSTLDLNRI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPA+VM LLE+VR E+T V+ +M +GK I+K VV G C G
Sbjct: 419 AAFTRRPQDVIGTHFFSPANVMKLLEVVRGEQTGKDVLATVMQLGKKIRKTCVVSGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A LLV G ++D AI FG +GPF+
Sbjct: 479 FIGNRMVEQYLRQAFLLVDEGSTPQQVDKAIERFGFAMGPFR 520
>gi|399073892|ref|ZP_10750710.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
gi|398041049|gb|EJL34131.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
Length = 692
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 201/534 (37%), Positives = 294/534 (55%), Gaps = 12/534 (2%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA ++ +G + ++TL +PPVNAL+ + GLK FE A + VKAIVL G
Sbjct: 1 MAAINAVTDLSVEGDIGVVTLNSPPVNALSAAVREGLKGAFEAAIADPAVKAIVLICEGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N IE+ KP+VAA+ G LGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQNTIENSPKPVVAAIHGTVLGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
H R+A P + GLPE+ +G++PG GGTQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 AHFRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRVVGVEKALEMVTTGQHVPAKAALAMGL 172
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
D++V + L + +A + A KP R + K+ + E+ R +
Sbjct: 173 FDSIVEEDALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAARGKPEIFSEFRAANARKFR 232
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV- 298
+ + IE + G+ +E K+F EL+ S HVFFA+R +K+P+V
Sbjct: 233 GFLAPENNIKCIEAAVNLPFDEGLKEERKLFMELMTGSQSAAQRHVFFAERQAAKIPDVP 292
Query: 299 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
D + P VRKV VIG G MG GI+ + I V + E E L +G+ I N
Sbjct: 293 DDTAIIP--VRKVGVIGAGTMGGGISMNFLNAGIPVTIIEAKQENLDRGVGVIRKNYENT 350
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
+G+LTQD + +L + + D D++IEAV E + +KQ++F +L+K P I
Sbjct: 351 AKKGRLTQDDVEKRMALLTPSMHLEDLADCDLIIEAVFELMEIKQEVFGKLDKIAKPGAI 410
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LA+NTS +D++++ TS + +IG HFFSPA+VM LLEIVR +T VI M +GK
Sbjct: 411 LASNTSYLDIDVIAASTSRPESVIGLHFFSPANVMRLLEIVRGAKTDKSVIATSMQIGKK 470
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
I KV V+VGNC GF NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 471 IGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 524
>gi|374369155|ref|ZP_09627192.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373099305|gb|EHP40389.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 204/526 (38%), Positives = 290/526 (55%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L + G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGLSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTLHS------VIKVVEGSGKPVVAAIHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A+ M++ +I SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAALNMIVSGNAIPSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A AA P+ +R L + A + +R A N P C+D
Sbjct: 181 AAVAFAKTAAANPGPYPKVRDLKVKHE-----NAEGFIAFSRNTVAAVAKNFPAPLKCVD 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + +G+ E + F L+ SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVAASL-KPFEAGLKAEREGFMYLITTPESRALRHAFFGERAASKIPDVPE-GTPTRKLE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
K+AVIG G MG GI + I V++ E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KIAVIGAGTMGGGITMNFLNAGIPVIMLETKQEALDRGVATIRKNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y E KD DMVIEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLTTTLSYDEIKDADMVIEAVFEEMGVKEIVFKKLDEVMKQGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAVEKFGFAMGPFRMG 519
>gi|443468142|ref|ZP_21058378.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
gi|442897219|gb|ELS24207.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
Length = 703
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 302/529 (57%), Gaps = 24/529 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+I L PPVNAL P+ A + D E A + V+AI+L G G F G DI F
Sbjct: 10 EDGLALIGLARPPVNALGQPLRAAILDACERAAADASVQAIILHGAHGLFCAGADIGEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G+ PD+ L++ L KP++AA+ LALGGGLELA+ C RI+ P +L
Sbjct: 69 ---GSEASFAAPDLP-NLLLRLTA-LDKPLIAAIGTLALGGGLELALACGYRISEPDARL 123
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE-LL 190
GLPE+ LG++PG GGTQRLPRL+G+ A++MM+ + I + ++LGL+D + + +E LL
Sbjct: 124 GLPEINLGLLPGAGGTQRLPRLIGVEPALDMMISGQPIGAGRAFELGLLDRLASGKESLL 183
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA---- 246
+R +A ++ +R P RT + + +E+ L++ +A N P+ ++
Sbjct: 184 DDARAFARELLDQRAPA----QRTSRFANPAESVAADFLSQFRAA----NEPRWKSRLAP 235
Query: 247 --CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 303
L +E G+++E ++FKE S L HVFFA+R ++P + DI L
Sbjct: 236 RLVLAAVEAACNLPLAEGLVREHELFKEAEASKQSAALRHVFFAEREAGRIPGIEADIPL 295
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + KVAVIG G MG GIA + I V L E E L G+ I N V RGK
Sbjct: 296 --RRIEKVAVIGAGTMGGGIAMNFVNAGIPVALLEQKGEALDCGLANIRKNYEISVKRGK 353
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LT + +++L G LDY++ D D+VIEAV E + +KQ++F EL++ C P ILA+NT
Sbjct: 354 LTAAQLEQRMELLFGTLDYADLADADLVIEAVFEKLEIKQQVFRELDRLCKPGAILASNT 413
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S++D++++ TS +IG HFFSPA+VM LLE+VR + T+ V+ M + K I K+P
Sbjct: 414 SSLDVDVIAASTSRPQDVIGLHFFSPANVMRLLEVVRGKATAPDVLATTMKIAKRIGKLP 473
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V+ G C GF NR PYS+ A LV G ++D + L +G F
Sbjct: 474 VISGVCFGFIGNRMLEPYSREAHRLVLEGATPTQVDKVLTDLDLNMGVF 522
>gi|73541099|ref|YP_295619.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72118512|gb|AAZ60775.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 693
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/527 (39%), Positives = 289/527 (54%), Gaps = 18/527 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ D A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVDGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +IE KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTL------HSVIRVIEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A M++ ++ SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTAVPSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++AA P+ +R L + L A+ A N P CL+
Sbjct: 181 AAVKFAQNVAAAPGPYPKVRDLKVRHE-----NPEGFLGFAKTTVGAMAKNFPAPLKCLE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 308
+ G + G+ +E F LV SR L H FF +RA SK+P+V +D L R +
Sbjct: 236 AVA-GSLKPFEQGLKEERDGFLYLVTTPESRALRHAFFGERAASKIPDVPSDTPL--RKI 292
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
K+AVIG G MG GI+ + I V + E E L +GI I N +GKLTQ+K
Sbjct: 293 EKIAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGIGIIRKNYENSAKKGKLTQEK 352
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ +L L Y + KD DMVIEAV E + +K+ +F +L++ ILA+NTST+D+
Sbjct: 353 VEQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVKEIVFKKLDEVMKQGAILASNTSTLDV 412
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T ++G HFFSPA+VM LLE+VR +T V+ +M +GK IKK VV G
Sbjct: 413 DKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKDVLATVMAIGKKIKKTAVVSGV 472
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 473 CDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFGFAMGPFRMG 519
>gi|209517039|ref|ZP_03265887.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502570|gb|EEA02578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 696
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 287/526 (54%), Gaps = 17/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++TL NPPVN L + AG+ + + A + VKAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVLTLNNPPVNGLGLSTRAGIVEGLDRAQNDPAVKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AA Q+
Sbjct: 68 TPKATQEPTLA------TVIEAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAAGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR +GL ++ M++ + S++ GL D VV + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEASLNMIVSGAPVLSDKLADSGLFDEVVANPAELA 181
Query: 192 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ L + A P +R D+ A ++ AR A + P C+
Sbjct: 182 EAALAFARKVGAQAGSHPKVR-----DRKIEHPNAAGFIQFARNSVAAIAKDFPAPHKCI 236
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 307
D +E G+ G G+ E + F LV SR L H FF +RA SK+P+V +D + R
Sbjct: 237 DAVEAGVKDGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RD 294
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ VAVIG G MG GIA + I V L E E L +G+ TI N V +GKL +
Sbjct: 295 INHVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALDRGLATIRKNYEATVKKGKLKPE 354
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
L +L L Y + K D+++EAV E + +K+++F L++ P ILA+NTST+D
Sbjct: 355 VMEQRLALLTPTLSYDDLKQADLIVEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLD 414
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 415 VDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIKKTAVVSG 474
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y + A ++ G ++D AI FG +GPF+
Sbjct: 475 VCDGFIGNRMIEQYVRQALFMLEEGALPAQVDKAIEKFGFAMGPFR 520
>gi|358451689|ref|ZP_09162122.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
gi|357224158|gb|EHJ02690.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
Length = 697
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 287/521 (55%), Gaps = 16/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL + +GL E+ + KA++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALGQAVRSGLLAALEQGQKDTEAKALLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + ++ +VN E+ KP+VAA+ G ALGGGLE A+ CH R+A ++GLP
Sbjct: 72 -------MQEPTLPTLVNTFENSDKPLVAAIHGTALGGGLETALSCHYRVAVSSAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G KA+EM+ + + + + LG++DAV +++ V
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEMITTGEFVGANDALALGILDAVEEGDDIRAVGM 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + KP R TDK+ + + +V R + KK A + C+D +E
Sbjct: 185 AYAQKVVDEGKPVRRVRDITDKIDA-DKGSDVFDQFRDELKKRARGLFSPFKCVDAVEAA 243
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKPRGVRKV 311
G+ +E ++F E + GL+H FF +R SKV P T + R V+ V
Sbjct: 244 FNLPFDEGMKRERELFMECMESPQRAGLIHSFFGEREVSKVKGLPKDTPV----RDVKSV 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
+IG G MG GIA + I V + EV + L KG+ I N +GKLTQ++
Sbjct: 300 GIIGAGTMGGGIAMNFVNVGIPVTIVEVKQDALDKGLAIIRRNYENSAKKGKLTQEQVEQ 359
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y +F+DVD+VIEAV E + +K++IF++L++ C P ILA+NTST+D++ +
Sbjct: 360 RMALITTSLTYDDFRDVDLVIEAVFEDMAIKKEIFAKLDEVCKPGAILASNTSTLDIDEI 419
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC G
Sbjct: 420 ASATKRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVMVGNCYG 479
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR A LV G ++D + G P+G F
Sbjct: 480 FVGNRMLHKRGTEAMSLVDEGATPQQVDKVLTDLGFPMGQF 520
>gi|221066315|ref|ZP_03542420.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220711338|gb|EED66706.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 699
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 303/538 (56%), Gaps = 22/538 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADKAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTSVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGEAVMSEMLAMLPGQKL-F 173
Query: 180 IDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
++E LL ++ AL++A AR P +R L G + A + +
Sbjct: 174 NKMSASAETLLAEAKALALEVADARPLPRVRDLSCKHPQGE-----AYFEFAATMVQGMS 228
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 229 KNFPAPLRCLEAVKNATTKKFDDGMMAEREAFMQLMMTPESRSLRHLFMAERAASKIPDV 288
Query: 299 TDIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 357
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 289 P--GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEA 346
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P
Sbjct: 347 QVRKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVARPGA 406
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K
Sbjct: 407 ILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVAK 466
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 467 KIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMG 524
>gi|413962686|ref|ZP_11401913.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413928518|gb|EKS67806.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 694
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 286/521 (54%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L G+ + E A DV+AIV+ G G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGHSTRLGIVEGVERANDDADVRAIVIIGAGKAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+A P Q+
Sbjct: 69 PKATQEPTLM------TVIATLEASAKPVVAAIHAVAMGGGLELALGAHYRVAVPGAQIA 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR+VGL A+ M++ + SE+ + L D + + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRVVGLETALNMIVSGAPVPSEKLAQTALFDELADGD-LLES 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A A R P + D+ A ++ AR A + P C+D IE
Sbjct: 182 ALSFARRAADRGGPHPKV---RDRQIEHPNAEGFIQFARNSVAGVAKHFPAPHKCIDAIE 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+G+ G G+ E + F LV SR L H FF +RA +K+ +V R + ++
Sbjct: 239 KGVKEGFERGLAFERECFLALVQTPESRALRHAFFGERAAAKIADVPS-NTPVRKIERIG 297
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA + + VVL E + L +GI TI N V +GKLTQ+K
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVVLLETKQDALDRGIATIRRNYEAQVKKGKLTQEKVEER 357
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ ++ L + + D+++EAV E + +K+++F +L++ ILA+NTST++L+ +
Sbjct: 358 MALIAPTLAFGDLAQADLIVEAVFEDLSVKEQVFRQLDEIAKSGAILASNTSTLNLDTIA 417
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +IG HFFSPA+VM LLE+VR +T V+ +M + K I+K VV G C GF
Sbjct: 418 SFTKRPGDVIGMHFFSPANVMKLLEVVRGAKTEKDVLATVMQLAKKIRKTAVVSGVCDGF 477
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A ++ G +ID AI +FG +GPF+
Sbjct: 478 IGNRMIEQYIRQALFMLEEGALPAQIDRAIENFGFAMGPFR 518
>gi|264679089|ref|YP_003278996.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262209602|gb|ACY33700.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 699
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 303/538 (56%), Gaps = 22/538 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 179
AAP T + LPE+ LG++PG GGTQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-F 173
Query: 180 IDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
++E LL ++ AL++A R P +R L G + A + +
Sbjct: 174 SKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKHPQGE-----AYFEFAATMVQGMS 228
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 229 KNFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTPESRSLRHLFMAERAASKIPDV 288
Query: 299 TDIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 357
G P R + V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 289 P--GDTPVREIWTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEA 346
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P
Sbjct: 347 QVKKGKLSEQKYEQRMALLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGA 406
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 407 ILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGK 466
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 467 KIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMG 524
>gi|410619733|ref|ZP_11330627.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410160865|dbj|GAC34765.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 702
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/528 (38%), Positives = 300/528 (56%), Gaps = 26/528 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL + ++A D+V AIV++ FSGG DI+ F
Sbjct: 13 VAVLYMQNPPVNALSQSVRVGLIENIKQALDNDNVHAIVISSQLALFSGGADISEFS--- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +P+V +++IE+ KPI+A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 70 GGNLEPHLPNV-----LDVIENASKPIIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 187
E+ LG++PG GGTQRLPRL G++KA++M++ S E+ KL G+ D +V SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLSGVFDLIVEDPSNLLSE 181
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ V ++ A D A RK ++ + S E+ R KK A + C
Sbjct: 182 AMAFVQKVIA-DGAKIRKTADVAIDKA------SAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ +E + G+++E ++F E + +R H FFA+RA S V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQHFFFAERAASHVSDY-DKSTPVRD 293
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+++V +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKQVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ +L G +Y+ DVD+VIEAV E + +K+++F+ L+K C P ILA+NTST+D
Sbjct: 354 AVEERMALLTGSTEYAALSDVDLVIEAVFEKMSVKKEVFAALDKVCKPGAILASNTSTLD 413
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + E TS + +IG HFFSPA+VM LLE+V+ ++TSA+VI M + K I KV V+VG
Sbjct: 414 VNEIAESTSRPEDVIGLHFFSPANVMKLLEVVKADKTSAEVIKTSMQMAKKINKVAVLVG 473
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR PY + A L+ G ++D I FGLP+GPF G
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQVDKIIYDFGLPMGPFTMG 521
>gi|413925843|gb|AFW65775.1| hypothetical protein ZEAMMB73_546088 [Zea mays]
Length = 407
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 188/215 (87%)
Query: 319 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378
MGSGIAT+ +++NI VVLKEVN ++L +G KTI N+ GLV RG LT+D+ + A+ +LKG
Sbjct: 1 MGSGIATSLLVSNISVVLKEVNPQFLQRGEKTIAGNLEGLVKRGSLTKDRMHKAMALLKG 60
Query: 379 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 438
LDYS+FKDVDMVIEAVIE +PLKQ IF+++EK CP HCILATNTSTIDLN+VG+KT+SQ
Sbjct: 61 ALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPKHCILATNTSTIDLNVVGKKTNSQ 120
Query: 439 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 498
DRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+T+GKIIKKVP+VVGNCTGFAVN F
Sbjct: 121 DRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITIGKIIKKVPIVVGNCTGFAVNLTF 180
Query: 499 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
FPY+Q + LLVSLG+DVFRID I +FG+P+GPFQ
Sbjct: 181 FPYTQGSHLLVSLGIDVFRIDRVISTFGMPMGPFQ 215
>gi|409396617|ref|ZP_11247597.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
gi|409118799|gb|EKM95190.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
Length = 705
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/519 (37%), Positives = 290/519 (55%), Gaps = 15/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ NPPVNAL + + GL A + +V+A+ L G F G DI F +
Sbjct: 13 IALVTVNNPPVNALGVAVRQGLLHALRAAEADAEVRAVALVCAGNTFFAGADIKEFGQPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A +P+V + IE C KP VAA+ G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA---PALPEV-----IAAIEACTKPWVAAIHGTALGGGLEVALGCHYRIARADARVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G++KA+EM++ + IT+ E + ++D + + R
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVAKALEMIVSGQPITAAEALEHLIVDELFDGD-----PR 179
Query: 195 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
AL A R R RT +L +++ E++ + + P + C+ +E
Sbjct: 180 AAALAYAQRLLDEGRRPRRTGELSVPGTDSAELIAARHAEVARRTPGLFAPLRCIAAVEA 239
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
G+ +E ++F E + LVH FFA+R K+ ++ +PR + AV
Sbjct: 240 ATRLPLAEGLERERQLFLECLHSPQRAALVHAFFAERQAGKIADLP-AATRPREIATAAV 298
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IGGG MG GIA + V L EV+ E L + ++ V RG L++ + L
Sbjct: 299 IGGGTMGVGIALCFANAGVPVKLLEVSDEALQRALQRARDTCAVSVRRGSLSEAEMERRL 358
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ GV DY+ +VD+V+EAV E + +KQ++F L+ C P ILA+NTS++DLN +
Sbjct: 359 ALIAGVTDYAALAEVDLVVEAVFEDMAVKQQVFERLDAVCKPGAILASNTSSLDLNQIAA 418
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T + ++G HFFSPA+VM LLE+VR RTS V+ M +GK +KKV VVVG C GF
Sbjct: 419 FTRRPEDVVGLHFFSPANVMRLLEVVRGARTSHAVLATAMAIGKRLKKVAVVVGVCDGFV 478
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR F Y + A L+ G ++D A+R+FG+ +GPF
Sbjct: 479 GNRMLFQYGREAEFLLEEGATPQQVDGALRNFGMAMGPF 517
>gi|385333682|ref|YP_005887633.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
gi|311696832|gb|ADP99705.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
Length = 702
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 287/518 (55%), Gaps = 10/518 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL + +GL E+ + +A++L G F G DI F K
Sbjct: 18 IGVITVNYPPVNALGQAVRSGLLAALEQGQKDTEARALLLVCEGRTFIAGADIREFGKP- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + ++ +VN E+ KP+VAA+ G ALGGGLE A+ CH R+A ++GLP
Sbjct: 77 -------MQEPTLPTLVNTFENSDKPLVAAIHGTALGGGLETALSCHYRVAISSAKVGLP 129
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G KA+EM+ + + +++ LG++DAV +++ V
Sbjct: 130 EVKLGLLPGAGGTQRLPRLTGARKALEMITTGEFVGAKDALALGILDAVEEGDDIRAVGM 189
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + KP R TDK+ + +V R + KK A + C+D +E
Sbjct: 190 AYAQKVVDEGKPVRRVRDITDKI-EADKGSDVFDQFRDELKKRARGLFSPFKCVDAVEAA 248
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G+ +E ++F E + GL+H FF +R SKV ++ R V+ V +I
Sbjct: 249 FNLPFDEGMKRERELFMECMESPQRAGLIHSFFGEREVSKVKGLSK-DTPVRDVKSVGII 307
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA + I V + EV E L KG+ I N +GKLTQ++ +
Sbjct: 308 GAGTMGGGIAMNFVNVGIPVTIVEVKQEALDKGLAIIRRNYENSAKKGKLTQEQVEQRMA 367
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
++ L Y +F+DVD+VIEAV E++ +K++IF++L++ C P ILA+NTST+D++ +
Sbjct: 368 LITPSLTYDDFRDVDLVIEAVFENMAIKKEIFAKLDEVCKPGAILASNTSTLDIDEIASA 427
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 428 TKRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVG 487
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR A LV G ++D + G P+G F
Sbjct: 488 NRMLHKRGTEAMSLVDEGATPQQVDKVLTDLGFPMGQF 525
>gi|421745980|ref|ZP_16183806.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
gi|409775497|gb|EKN56977.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
Length = 693
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/526 (38%), Positives = 287/526 (54%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+ITL NPPVN L G+ + A VKA+V+TG G FSGG DI F
Sbjct: 8 QDGIAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAVVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +IE+ KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTL------HSVIKVIENSTKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPR++GL A+ M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRVIGLEAALNMIVTGNPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 192 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++ A P +R L + A L A+ A N P C++
Sbjct: 181 AAIAFARNVGAASGPHPKVRDLKVRHE-----NAEGFLAFAKNTVAAVAKNFPAPGKCVE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + G+ E + F LV SR L H FF +RA SK+P+V R +
Sbjct: 236 AVAASLKPFD-EGLRLEREGFMFLVNTPESRALRHAFFGERAASKIPDVPS-DTPTRKIE 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KVAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTVLETKQEALDRGVATIRRNYENSAKKGKLTQEKV 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + KD D++IEAV E + +K+ +F +L++ P ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDIKDADLIIEAVFEEMGVKETVFKKLDEVAKPGAILASNTSTLDVN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR ++T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTRRPQDVVGMHFFSPANVMKLLEVVRGDKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMG 519
>gi|148553751|ref|YP_001261333.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498941|gb|ABQ67195.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 678
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/520 (38%), Positives = 291/520 (55%), Gaps = 23/520 (4%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I + NPPVNAL + GL + E + +V+AIV+ G F G DI+ F K
Sbjct: 14 IMVDNPPVNALGHAVRKGLLEALEAGARQPEVEAIVIACAGRTFFAGADISEFGKPP--- 70
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
++PD+ N IE KP+VAA+ G ALGGGLE+A+ CH R+A P +LGLPE+
Sbjct: 71 LDPILPDL-----CNAIEALAKPVVAAIHGTALGGGLEVALACHYRVAVPSARLGLPEVK 125
Query: 138 LGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 197
LG+IPG GGTQRLPRLVG++ A +M++ I + + +LGL+D V L++ + WA
Sbjct: 126 LGLIPGAGGTQRLPRLVGVAAATDMIVSGDPIPAGKAAELGLVDHVAAEGSLIEEAHRWA 185
Query: 198 LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQACLDVIEE 253
IA RR L RT + +A + + A A+K TAP QAC + +
Sbjct: 186 QVIAGRR-----PLPRTGERPVAGDAAAIDRYAETHARKLRGQTAP-----QACFEALRA 235
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
I G+ E +F++LV D S L H FFA+R +++ + D ++P + V V
Sbjct: 236 AIDLPLAEGLAVERGLFRQLVAGDQSAALRHYFFAERRAARIDGL-DASIEPLPIETVGV 294
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG+GIA A + + VVL E ++ L +G+ I V +G++TQ+ + AL
Sbjct: 295 IGAGTMGAGIAMAFLSKGLRVVLLETGADALDRGLANIRRTYEASVAKGRMTQEAGDQAL 354
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
L LDY+ D++IEAV E + +K+++F+ ++ P ILATNTS +D++ +
Sbjct: 355 ARLSTTLDYAALGGCDLIIEAVFELMAVKREVFARIDAVARPGAILATNTSYLDIDEIAA 414
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T D ++G HFFSPA++M LLE+VR RTS +V+ M + K I K+ VV GN GF
Sbjct: 415 ATGRPDHVVGLHFFSPANIMKLLEVVRGARTSPRVLATAMALAKRIGKIAVVAGNGYGFI 474
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR A L+ GV + ID A FG+P+GPF+
Sbjct: 475 GNRLLARRRSEAFELLLEGVAPWDIDEAHVGFGMPMGPFR 514
>gi|332530996|ref|ZP_08406918.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
gi|332039557|gb|EGI75961.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
Length = 701
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 213/535 (39%), Positives = 291/535 (54%), Gaps = 24/535 (4%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
EV D VA+ITL NPPVN L G+ D E A + VK+IV+TG G FSGG DI
Sbjct: 6 EVRGD-VAVITLNNPPVNGLGYATRKGVTDGLERANADPKVKSIVITGAGRAFSGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F G + + ++ V+ E+ KP+VAA+ +A+GGGLEL +GCH RI AP
Sbjct: 65 EF------GTPKALQEPNLLSVIAAAENSAKPVVAALHTIAMGGGLELPLGCHYRIVAPG 118
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAV 183
T++ LPE+ LG+IPG GGTQRLPR +G+ A+ MM+ + + +E G KL D V
Sbjct: 119 TKVALPEVKLGLIPGAGGTQRLPRALGVEPALNMMVSGEPVPAELLAQVPGQKL--FDKV 176
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS---LSEAREVLKLARLQAKKTAPN 240
S E L + AL AR K +R L + L + L +A + AR A N
Sbjct: 177 AQSAETL-LDEALAL---AREKADVRPLPKVRDLPAKHPLGDA--YFQFARNTVGAMAKN 230
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P C+D +E G+ E + F L+ R L HVF A+RA SK+ +V +
Sbjct: 231 FPAPLKCVDAVEAATKKKFDDGIAYEREHFINLMWTPECRALRHVFAAERAASKIADVPE 290
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
K R ++ VAVIG G MG GI + I V + E E L +G+ TI N V
Sbjct: 291 DTPK-REIKSVAVIGAGTMGGGITMNFLNAGIPVKVLETKQEALDRGLATIRKNYEAQVG 349
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+GKL QDK + +L L+Y + K D+VIEAV E + +K+ +F +L++ P ILA
Sbjct: 350 KGKLKQDKYEQRMALLSTTLNYDDIKYADLVIEAVFEEMGVKEAVFKKLDEVMKPGAILA 409
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTST+DLN + T ++G HFFSPA+VM LLE+VR +T V+ +M + K IK
Sbjct: 410 SNTSTLDLNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGAKTGKDVLATVMALAKTIK 469
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K VV G GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 470 KTAVVSGVTDGFIGNRMIEQYSRQAGFLLEEGATPEQVDKAIEKFGFAMGPFRMG 524
>gi|377820680|ref|YP_004977051.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
gi|357935515|gb|AET89074.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
Length = 694
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 282/522 (54%), Gaps = 15/522 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+ITL NPPVN L G+ + A ++V+AIV+ G G FSGG DI F
Sbjct: 10 GVAVITLDNPPVNGLGHSTRLGIVEGIGRANGDENVRAIVIIGAGKAFSGGADITEFNTP 69
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+A+P Q+ L
Sbjct: 70 KATREPTLT------TVIKALEASAKPVVAAIHAVAMGGGLELALGAHYRVASPGAQIAL 123
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLK 191
PE+ LG++PG GGTQRLPR+VGL A+ M++ + SE+ + GL D + + E
Sbjct: 124 PEVKLGLLPGAGGTQRLPRVVGLETALNMIVSGTPVLSEKLAQTGLFDELAEGDLLEAAL 183
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
A D + P +R D+ A ++ AR A + P C+D I
Sbjct: 184 SLASQAADKGSEH-PKVR-----DRKIDHPNAEGFIQFARNGVAAAAKHFPAPHKCIDAI 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E+G+ G G+ E + F LV SR L H FF +RA K+ +V G R + +V
Sbjct: 238 EKGVKEGFERGLAFERECFLSLVQTPESRALRHAFFGERAAGKIADVPP-GTPVRTIARV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + V L E E L +G+ TI + +GKLT+++A
Sbjct: 297 GVVGAGTMGGGIAMTFLNAGFPVTLLETKQEALDRGLATIRGHYEAQAAKGKLTREQAEA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y + D D++IEAV E + +K+ +F +L++ P +LA+NTST+DLN +
Sbjct: 357 RMALITPTLVYGDLADADLIIEAVFEDLSVKESVFRQLDQCAKPGAVLASNTSTLDLNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPA+VM LLE+VR E+T V+ +M + K I+K VV G C G
Sbjct: 417 ASFTQRPGDVIGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y + A ++ G +ID AI FG +GPF+
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEKFGFAMGPFR 518
>gi|301631451|ref|XP_002944811.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 735
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 294/531 (55%), Gaps = 27/531 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ E+A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLATRQGIVAGLEKAHADASVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + + V+N +E KP+VAA+ + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKAMAEPHLHTVINAVEHSAKPVVAAIHSVCMGGGLELALGCHYRVAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS--- 186
E+ LG++PG GGTQRLPR++G+ A+ M++ +++ SE G KL D + S
Sbjct: 125 EVKLGILPGAGGTQRLPRVLGVEAALNMIVSGETVQSEFIGAVPGQKL--FDKMAASPAS 182
Query: 187 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
EE L +R A AR P +R+L E + AR K A N+P
Sbjct: 183 LPEEALAFARSVA---DARPLPLVRNLPCQH-----PEGDAYFQFARNMVKGMAKNVPAP 234
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+D +E G+ E ++F L+ SR L H+F A+RA SK+ +V +
Sbjct: 235 AKCVDAVEAATRRKFTDGLAYERELFIHLMWTPESRALRHLFLAERAASKISDVPADTPR 294
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R V+KV VIG G MG GI+ + I V + E+ E L +GI TI N V +GKL
Sbjct: 295 -RDVKKVGVIGAGTMGGGISMNFLNAGIPVTILEMQQEALERGIATIRKNYEAQVKKGKL 353
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+DK + +L L Y + KD D++IEAV E++ +K+++F +L+ P ILA+NTS
Sbjct: 354 KEDKYQQRMALLSSTLSYDDLKDCDLIIEAVFENLSVKEQVFKQLDAVMKPGAILASNTS 413
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
T+D++ + T ++G HFFSPA+VM LLE+VR RT V+ +M + K I+KV V
Sbjct: 414 TLDVDKIAAFTQRPQDVVGLHFFSPANVMKLLEVVRGARTGKDVMATVMAMAKKIRKVAV 473
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
V G C GF NR Y + L+ G ++D AI FG +GPF+ G
Sbjct: 474 VSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAIEKFGFAMGPFRMG 524
>gi|445497027|ref|ZP_21463882.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
gi|444787022|gb|ELX08570.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
Length = 695
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 286/523 (54%), Gaps = 14/523 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + ++A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRTAAVKGIQQALADDAVKAIVITGAGKAFSGGADIKEFNSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + S+ ++ E KP+VAA+ + +GGGLEL++GCH R+A P Q+ LP
Sbjct: 71 A------LTEPSLHTLIATAESSTKPVVAAIHTVCMGGGLELSLGCHYRVAMPGAQIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 193
E+ LG++PG GGTQRLPR++GL A+ M++ + S++ L D V ++ +L+ +
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLGLEMALNMIVSGTPVLSDKLAGTALFDQVFAADADLVSSA 184
Query: 194 RLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A IA AR P +R D+ L+ +R K A P C++ +
Sbjct: 185 VAFAEKIADARPLPKVR-----DRKVDYPNHEAFLQFSRNTVKAMAGPFPAPLECVETVA 239
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ E + F L+ S+ L H FFA+R SKVP+V R +++ A
Sbjct: 240 ASVTMKFEDGMKFERERFLHLIQTTESKALRHAFFAERVASKVPDVP-ADTPTRAIKQAA 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA + I VV+ E E L KG+ TI N + +GKLTQ+K +
Sbjct: 299 VIGAGTMGGGIAMNFLNAGIPVVMLETKQEALDKGLATIRKNYENTMKKGKLTQEKFDQR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ ++ G L Y + D+V+EAV E + +K+ +F +L++ P ILA+NTST+DLN +
Sbjct: 359 MALVSGTLAYEDIGQADIVVEAVFEDMGVKETVFRKLDEVMKPGAILASNTSTLDLNQIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +IG HFFSPA+VM LLEIVR +T V+ + + K +KK VV G C GF
Sbjct: 419 NFTKRPQDVIGTHFFSPANVMKLLEIVRGAQTGKDVLATALALSKKLKKTGVVSGVCDGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 479 IGNRMIEQYSRQAGFLLEEGALPEQVDKAVEKFGFAMGPFRMG 521
>gi|73537708|ref|YP_298075.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72121045|gb|AAZ63231.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 704
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 289/521 (55%), Gaps = 16/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ NPPVNAL + + GLK E+A + V+A+++ G G F G DI F K
Sbjct: 16 VQVITICNPPVNALGVAVRQGLKQAIEQAEADAGVRAVLVVGEGTAFIAGADIREFGK-- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP S+ V N IE K +VAA+ G ALGGGLE+AM H R+A P +LGLP
Sbjct: 74 -----PPMPP-SLPEVCNQIEASNKLVVAAIHGPALGGGLEVAMSAHYRLALPAAKLGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR PRL+G+ A ++ML K ++++ GL+D + ++ +
Sbjct: 128 EVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAAQAAGLVDRLAEGDDPVAAGL 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK--KTAPNMPQHQACLDVIE 252
+ ++ + P L RT L +A + +L LQA+ K + Q ++ +
Sbjct: 188 AYVNELLEQGAP----LRRTRDLAIADKAAALAELDTLQAETAKKTRGLFSPQKIVECVR 243
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ KE +F E + GLVH FFA+R T+KVP G PR + ++A
Sbjct: 244 AAVELPFDEGLAKERALFVECLNSPQRAGLVHAFFAERETAKVPEAQ--GAAPRALNRIA 301
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG+GI A + + VV+ E ++E + +G +E GL+ +G++T +
Sbjct: 302 VIGGGTMGAGITVAALDTGLPVVMIERDAESIARGQANVEKVYDGLIAKGRMTPEGKAAI 361
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ Y DVD+VIEAV E + +K+ +F +L++ C P +LATNTS +D++ +
Sbjct: 362 MARYTPSTSYESIADVDLVIEAVFEDIEVKKAVFQQLDRVCKPGAVLATNTSYLDIDAIA 421
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S +IG HFFSPA++M LLEIV + S V++ + K +KK+PV G C GF
Sbjct: 422 GSISRPQDVIGLHFFSPANIMKLLEIVVPAKVSPDVVVTAFELAKRMKKIPVRAGVCDGF 481
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y Q+A ++ G + ID A+R FG P+GPFQ
Sbjct: 482 IGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQ 522
>gi|334343757|ref|YP_004552309.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100379|gb|AEG47803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 680
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 290/517 (56%), Gaps = 20/517 (3%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I + NPPVNAL I + GL A + VKAIV+ G G FSGG DI F K
Sbjct: 13 IVMNNPPVNALGIGVRQGLAQAIAGAQTNPAVKAIVIRGGGKLFSGGADITEFGKPFA-- 70
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
+ + VV+ IE KP+VAA+ G+ALGGGLE+A+GCH RIA P+T+LGLPE++
Sbjct: 71 ------EPGLPQVVDAIEASAKPVVAAIHGMALGGGLEVALGCHYRIATPETKLGLPEVS 124
Query: 138 LGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 197
LG++PG GGTQRLPRL+G+ A+EM++ + + +G +LGL+D + ++L + +A
Sbjct: 125 LGLLPGAGGTQRLPRLIGVEAALEMIVSGSPVPAAKGAELGLVDKLAAQDQLAAEAIAFA 184
Query: 198 LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVH 257
+ R RT L + + A + A +K + +AC++ ++
Sbjct: 185 RTVDGPR--------RTGDLDASATADVFERFAENNKRKIG-ALDAPKACIEAVKAATEL 235
Query: 258 GGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGG 316
G LKE +F +L+ D S+ L HVFFA+RA +KV + D+ +P + KV VIG
Sbjct: 236 PLDQGQLKERALFTQLMNGDQSKALRHVFFAERAAAKVDGLPKDVARRP--IAKVGVIGA 293
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG GI+ + I V + E+ E L KG I N +G+LT + A+ +L
Sbjct: 294 GTMGGGISMNFLSAGIPVTIVEMTQEALDKGTGLIRKNYEATAAKGRLTMAQVEKAMGLL 353
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
LD+ K+ D++IEAV E++ +K++IF+ L+ P +LA+NTS + ++ + T
Sbjct: 354 SPTLDFDALKECDLIIEAVYENMDVKKEIFTRLDGIAKPGALLASNTSYLSIDEIASATG 413
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
++G HFFSPA+VM L+E+VR +T+ V+ M +G+ I KVPVV G C GF NR
Sbjct: 414 RPQDVLGLHFFSPANVMKLVEVVRGAKTAPDVLATGMDIGRRIGKVPVVSGVCYGFIGNR 473
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
P A ++ G ++D FG+P+GP Q
Sbjct: 474 MLAPRLNGAIAMLVEGATAEQVDRVSVEFGMPMGPLQ 510
>gi|386286798|ref|ZP_10063982.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
gi|385280180|gb|EIF44108.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
Length = 701
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 302/524 (57%), Gaps = 23/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I++ NPP+NA++ + GL A + D V ++++ G F G DI F K
Sbjct: 21 IGLISINNPPINAISAAVREGLISALTRAKA-DKVSSVLIYCMGKTFIAGADITEFGKPQ 79
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P+V ++ IE+ P++AA+ G ALGGGLE+AM H R AA T+LGLP
Sbjct: 80 TG---PTLPEV-----ISAIEEFPVPVIAALHGNALGGGLEIAMAAHYRCAAQNTKLGLP 131
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GGTQRLPRL+G+ KA+ M+ K+I+++E + GLID ++ + L +
Sbjct: 132 EVTLGLVPGSGGTQRLPRLIGVEKALAMISSGKAISADEALQCGLIDQIIAAS-LPESGI 190
Query: 195 LWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A +D A+ +P T L + + + K T P + L++I
Sbjct: 191 AYAKELIDNGAKVRP-------TSALIASPVDEHFFENKKNSLKPTGILAPAY--ILELI 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E + G E + F E S L H+F A+RA +K+P++ + PR + KV
Sbjct: 242 ELATKTDIHEGQRVERERFLECRSSAGSAALRHIFLAERACTKLPDIAP-SVTPRPINKV 300
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA V L E E L +G+ IEAN V RG+L+QD+
Sbjct: 301 AVIGAGTMGGGIAMCFASAGFPVTLIETAQENLNRGLDQIEANYNQSVKRGRLSQDQLAK 360
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
A+ +K L Y++ D D+VIEA E++ +K+ +FS+L + C P+CILATNTS +D+N +
Sbjct: 361 AISNIKPSLQYADIADADLVIEATFENMDVKKAVFSKLVEVCKPNCILATNTSYLDVNTI 420
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T +IGAHFFSPA++M LLE+VRT++T+ +V++ +M + K I KV V VG C G
Sbjct: 421 ADVTGRPQDVIGAHFFSPANIMKLLEVVRTQKTAPEVVMSVMVIAKRIGKVAVAVGVCHG 480
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR F Y++ A+LL+ G ++D+ I+++G+ +GP G
Sbjct: 481 FVGNRMFKAYARQAQLLLLEGCTPAQVDTVIQTWGMAMGPLAVG 524
>gi|333892777|ref|YP_004466652.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
gi|332992795|gb|AEF02850.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
Length = 706
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 208/526 (39%), Positives = 287/526 (54%), Gaps = 21/526 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA IT+ + PVNAL+ + GL D E A S D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATITMQSAPVNALSRAVRVGLIDGIESALSDDSVSAIVITSSLALFSGGADISEFS-- 73
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
GD+S P++ V++ IE+ KP+VA + G A GGGLE+A+ CH RI Q+GL
Sbjct: 74 --GGDLS--PNLPE--VLDKIENATKPVVAVLPGPAFGGGLEVALACHHRITFAGNQVGL 127
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELLK 191
PE+ LG++PG GGTQRLPRL + A+ M++ K + KL G+ D + E LL+
Sbjct: 128 PEVNLGILPGAGGTQRLPRLADPATALTMIVTGKPTSV---VKLPGVFDKISDKPEHLLE 184
Query: 192 VSRLWALDIAARRKPWIRSLHRTDK--LGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
++ + + A + RT L E + V Q KK A C++
Sbjct: 185 DTKQYLASLNAEN-----CIKRTSDITLTMSEEVQGVFDAVTAQTKKAARGFFAPLKCIE 239
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ G+ E K+F E + +R H FFA+RA V + D R +
Sbjct: 240 AVKGAYTLAFEDGLKHEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKSTPERSIE 298
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KVAVIG G MG GIA I V + E+ E L KG+ I N +GKLTQ++
Sbjct: 299 KVAVIGAGTMGGGIAMNFANAGIPVTMLELKQEALDKGLALIRKNYENSAKKGKLTQEQV 358
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L G Y + DVD+VIEAV E + +K+ +F+ L+K C P ILA+NTST+D+N
Sbjct: 359 ETRMALLSGTTTYDDLADVDLVIEAVFEKMEVKKTVFTTLDKVCKPGAILASNTSTLDVN 418
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ TS +IG HFFSPA+VM LLE+V+ E TSA VI M + K IKKV V+VG C
Sbjct: 419 EIAACTSRPQDVIGLHFFSPANVMKLLEVVKAEDTSADVIKTCMKLAKRIKKVAVLVGVC 478
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR PY + A L+ G ++D + FG+P+GPF G
Sbjct: 479 FGFVGNRMIEPYGREANRLLLEGASPEQVDRVLTQFGMPMGPFTMG 524
>gi|410641551|ref|ZP_11352071.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410645290|ref|ZP_11355757.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410135220|dbj|GAC04156.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410139084|dbj|GAC10258.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 702
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 292/523 (55%), Gaps = 16/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D V AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQVDAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELLKV 192
E+ LG++PG GGTQRLPRL G++KA++M++ S E+ KL G+ D VV LL
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLDGVFDLVVEDPTNLLSE 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ D+ A +R + + S E+ R KK A + C+ +E
Sbjct: 182 GMAFVQDVIAN-GAKVRKTSDVE-IDKASAPDELFAQYRQGLKKQARGFFAPERCIQAVE 239
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+++E ++F E + +R H FFA+RA + V + D R ++KV
Sbjct: 240 ASVALPFEQGLVREGELFMECMASKEARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVG 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IG G MG GIA I VV+ E+ E L KG+ I N +GKLTQ +
Sbjct: 299 IIGAGTMGGGIAMNFANAGIPVVMLELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L+G +Y DVD+VIEAV E + +K+++F L+K C P ILA+NTST+D+N +
Sbjct: 359 MALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS + +IG HFFSPA+VM LLE+V+ E+TS +VI M + K I KV V+VG C GF
Sbjct: 419 ASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR PY + A L+ G ++D I FGLP+GPF G
Sbjct: 479 VGNRMIEPYGREAARLMLEGATPQQVDKVIYDFGLPMGPFTMG 521
>gi|241763979|ref|ZP_04762020.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366730|gb|EER61182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 705
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 290/533 (54%), Gaps = 13/533 (2%)
Query: 2 AAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
A P + +G + ++T+ NPPVNAL + + GL A + D + ++L G G
Sbjct: 4 ATPATVVTTAREGAILVVTVDNPPVNALGVAVRQGLAAAMAAAQADDGIAGVLLVGAGKA 63
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F G ++ P S+ V IEDC KP++A + G ALGGGLE+AM
Sbjct: 64 FIAGADIREF------GKPAMSP--SLPEVCRSIEDCTKPVIAVLHGAALGGGLEVAMSA 115
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A P LGLPE+ LG++PG GGTQR PRL+G+ A E+ML K + ++ + GL+
Sbjct: 116 HYRLALPAASLGLPEVNLGLLPGSGGTQRAPRLMGVKAATELMLSGKHLGAKAALQAGLV 175
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D +V S + +A ++ A++ P R+ R + + S A L+ R K
Sbjct: 176 DRLVESGTPVAAGLAYANELLAQKAPVRRT--RDIAIANPSGALADLEALRADTAKKTRG 233
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ ++ ++ + G+ +E +F E + GL+H FFA+R T+K+P
Sbjct: 234 LFSPLKIIECVQAAVQLTFDEGLARERALFLECLDSPQRAGLIHAFFAERETAKIPEAQ- 292
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+PR + +A+IGGG MG+GI + + V + E ++E + +G K +E GL+
Sbjct: 293 -AAQPRAFKTLAIIGGGTMGAGITVSALDAGFTVTMIERDAESIARGQKNVEKVYDGLIA 351
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G++T++ + Y E DVD+VIEAV E + +K+ +F EL++ C +LA
Sbjct: 352 KGRMTEEGKAATMARYTPSTSYDEIADVDLVIEAVFEDLEVKKAVFKELDRVCKKGAVLA 411
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + TS +IG HFFSPA++M LLEIV + SA V+ + K +K
Sbjct: 412 TNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATAFELAKKLK 471
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KVPV G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 472 KVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 524
>gi|452752262|ref|ZP_21952005.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
gi|451960338|gb|EMD82751.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
Length = 685
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 290/523 (55%), Gaps = 12/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V ++ NPPVNAL + GLK+ E + D VKAIV+ +G F G DI F
Sbjct: 10 HDDVLVVISDNPPVNALGAAVRQGLKEGVEAGLADDSVKAIVIRCDGRTFHAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E KPIVAA+ G ALGGGLE+A+ CH R+A P +L
Sbjct: 70 KPPQG--------PSLPETLDAMEASAKPIVAAIHGTALGGGLEVALACHYRVAVPSAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR+VG+ KA++M++ + I + E K+GL+D + E+ L+
Sbjct: 122 GLPEVNLGLLPGAGGTQRLPRVVGVEKALDMIVFGRPIGAGEAEKIGLVD-TLAGEDSLE 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A+ + RTD+L + ++ + + + AC+ +
Sbjct: 181 ADAIAFAREKAKADSHPATSRRTDRLPDAAHIGQIFDDFKAKNGRKMRGFDAPAACMRCV 240
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
GV E + F +L+ D S+ H+FFA+R +K+ +V D L P +RK
Sbjct: 241 RAAAELPYVEGVKVEREEFMKLMQGDQSKAQRHLFFAERQAAKIDDVPKDTPLIP--IRK 298
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V +IG G MG GIA + I V + E+ E L +G + N G V RG+++++KA
Sbjct: 299 VGIIGAGTMGGGIAMNFLSAGIPVTMLEMKQEALDRGTGVMGKNYEGNVKRGRMSEEKAK 358
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
A+ +L LDY++ D D+VIEAV ES+ +K+ +F +L+ ILA+NTS ++++
Sbjct: 359 AAMDLLSTTLDYADLADCDLVIEAVFESMDVKKDVFGKLDAHVKDGAILASNTSYLNVDE 418
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ + T ++G HFFSPA+VM LLE+VR T V+ +M + K I KV VV G C
Sbjct: 419 IAQATKRPGYVVGMHFFSPANVMKLLEVVRGAETRPDVLATVMALSKKIGKVAVVAGVCH 478
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR P + A L+ G ++ID + FG+P+GPFQ
Sbjct: 479 GFIGNRMLSPRQREANKLIMEGATPWQIDKVHQEFGMPMGPFQ 521
>gi|385208794|ref|ZP_10035662.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385181132|gb|EIF30408.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 706
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 286/521 (54%), Gaps = 15/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAVEAADADNAVEAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G A++++L + +S+E LGLID + +S+++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASSKEALALGLIDRLGSSDDILAE 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ ++ A P +R LG + + + AR + K + + +D +E
Sbjct: 188 GLAYVHELLAAHAP-VRRTREAAALGDRAASLAAVTAARAETAKKSRGLFSPLKIIDAVE 246
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
I G+ E K+F E + GL+H FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALNAIG 304
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+GGG MG+GIA A + + V + E + L +G+ IE GL+ +G+++ DK
Sbjct: 305 VVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGLAHIEKVYDGLIAKGRMSADKKAAV 364
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ G Y D D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 365 MARWNGSTSYDALADADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIA 424
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S +IG HFFSPA++M LLE+V ++ SA V+ K ++K PV G C GF
Sbjct: 425 ASISRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFEFAKNLRKTPVRAGVCDGF 484
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 485 IGNRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|407699845|ref|YP_006824632.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
gi|407248992|gb|AFT78177.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
Length = 707
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 289/525 (55%), Gaps = 19/525 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I GL + A D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVGLIEGINNALEDDSVSAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 190
LPE+ LG++PG GGTQRLPRL ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ ++ + L K R+ T L E + V Q KK A C++
Sbjct: 184 EDTKAY-LQALTPDKAIKRTCDIT--LSMSDETQAVFDAVTAQTKKAARGFFAPLKCIEA 240
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ G+ E K+F E + +R H FFA+RA V + D R + K
Sbjct: 241 VRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERNIEK 299
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ++
Sbjct: 300 VAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQVE 359
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+D++
Sbjct: 360 SRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDIDE 419
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+VG C
Sbjct: 420 IATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLVGVCF 479
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR PY + A LV G ++D + FG+P+GPF G
Sbjct: 480 GFVGNRMIEPYGREANRLVLEGATPEQVDRVLTEFGMPMGPFTMG 524
>gi|332306389|ref|YP_004434240.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173718|gb|AEE22972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 702
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 292/523 (55%), Gaps = 16/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D + AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQIDAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELLKV 192
E+ LG++PG GGTQRLPRL G++KA++M++ S E+ KL G+ D VV LL
Sbjct: 125 EVNLGILPGAGGTQRLPRLSGVAKALDMIV---SGRPEKASKLDGVFDLVVEDPTNLLSE 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ D+ A +R + + S E+ R KK A + C+ +E
Sbjct: 182 GMAFVQDVIAN-GAKVRKTSDVE-IDKASAPDELFAQYRQGLKKQARGFFAPERCIQAVE 239
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+++E ++F E + +R H FFA+RA + V + D R ++KV
Sbjct: 240 ASVALPFEQGLVREGELFMECMASKEARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVG 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IG G MG GIA I VV+ E+ E L KG+ I N +GKLTQ +
Sbjct: 299 IIGAGTMGGGIAMNFANAGIPVVMLELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L+G +Y DVD+VIEAV E + +K+++F L+K C P ILA+NTST+D+N +
Sbjct: 359 MALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS + +IG HFFSPA+VM LLE+V+ E+TS +VI M + K I KV V+VG C GF
Sbjct: 419 ASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR PY + A L+ G ++D I FGLP+GPF G
Sbjct: 479 VGNRMIEPYGREAARLMLEGATPQQVDKVIYDFGLPMGPFTMG 521
>gi|254503279|ref|ZP_05115430.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439350|gb|EEE46029.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 696
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 301/525 (57%), Gaps = 21/525 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+I + NPPVNAL+ + +GL+D F D +KAIV+ G G F G DI F
Sbjct: 11 EDNIAVIEIANPPVNALSHAVRSGLQDAFRGIAENDAIKAIVVYGAGRTFVAGADIREFG 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +P++ +N IE C +P++A+V G LGGGLELA+G H RIAAPKT+L
Sbjct: 71 QPPKE---PFLPEL-----INEIESCTRPVIASVHGTVLGGGLELALGAHYRIAAPKTKL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE++LG++PG GGTQRLPRLV ++KAI+M+ K +++ E +LGLID + +++
Sbjct: 123 GLPEVSLGLLPGAGGTQRLPRLVPVTKAIDMITSGKPVSANEALELGLIDQISGEDDMRA 182
Query: 192 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+A + A +P T + G +AR L K A Q C+
Sbjct: 183 AGLAYAKALVKQGAGPRPVSGLPCNTPEDGLFDKARATLA-------KKARGQLASQKCI 235
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D IE + G+ +E +F+ L+ D L+H FF++R K+P + D+ +PR +
Sbjct: 236 DAIEGAVNLPFAEGLAQERALFRALMDSDQRAALIHAFFSERQVGKLPEIKDV--EPRIL 293
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
V +IGGG MGSGIAT+ +L + V L E ++E + K T+ N+ G V RGKL+Q+K
Sbjct: 294 ENVGIIGGGTMGSGIATSALLAGLTVTLIERDAEAVAKAEGTVSKNLAGAVKRGKLSQEK 353
Query: 369 ANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ + K DY + D+VIEAV ES+ +K+++F +L+K C P +LA+NTS +D
Sbjct: 354 FDAIMAGHFKAGSDYDALAEADLVIEAVFESMDVKKEVFGKLDKICKPGAVLASNTSYLD 413
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + E TS +IG HFFSPAHVM LLEIV +T+ V+ + K + K+ V G
Sbjct: 414 VDEIAEITSRPADVIGLHFFSPAHVMRLLEIVVGAKTAPDVVATGFALAKRLGKIGVRAG 473
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
C GF NR Y ++ V G F +D A+ FGL +GPF
Sbjct: 474 VCDGFIGNRILATYRKAIDGAVLAGASPFDVDRALVDFGLAMGPF 518
>gi|406596554|ref|YP_006747684.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
gi|406373875|gb|AFS37130.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
Length = 707
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 294/529 (55%), Gaps = 27/529 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I GL + A D V+AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVGLIEGINNALDDDSVRAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 190
LPE+ LG++PG GGTQRLPRL ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 191 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALTPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR PY + A L+ G ++D + FG+P+GPF G
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMG 524
>gi|410628150|ref|ZP_11338879.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410152372|dbj|GAC25648.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 702
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 297/528 (56%), Gaps = 26/528 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A +VKAIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNAEVKAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENATKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 187
E+ LG++PG GGTQRLPRL G++KA++M++ S E+ KL G+ D VV SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLAGVFDLVVEDPTNLLSE 181
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ V ++ A D A RK ++ ++ S E+ R KK A + C
Sbjct: 182 AMAFVQKVIA-DGAQVRKTSDVAIDKS------SAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ +E + G+++E ++F E + +R H FFA+RA + V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQHFFFAERAAAHVSDY-DKSTPTRD 293
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++KV +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ +L+G +Y+ DVD+VIEAV E + +K+++F L+K C ILA+NTST+D
Sbjct: 354 AVEERMALLQGSTEYAALSDVDLVIEAVFEKMSVKKEVFGALDKVCKKGAILASNTSTLD 413
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI M + K I KV V+VG
Sbjct: 414 VNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSADVIKTCMQMAKKINKVAVLVG 473
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR PY + A L+ G +ID I FGLP+GPF G
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYDFGLPMGPFTMG 521
>gi|109898233|ref|YP_661488.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
gi|109700514|gb|ABG40434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 702
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/528 (37%), Positives = 294/528 (55%), Gaps = 26/528 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D V+AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQVEAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 187
E+ LG++PG GGTQRLPRL G++KA++M++ S E+ KL G+ D +V SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLAGVFDLIVEDPTNLLSE 181
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ V ++ A R+ + + S E+ R KK A + C
Sbjct: 182 AMAFVQKVVAEGAKVRKTSDV-------AIDKASAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ +E + G+++E+++F E + +R H FFA+RA + V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVRESELFMECMGSKEARAQQHFFFAERAAAHVSDY-DKSTPTRD 293
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++KV +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ + +L+G +Y DVD+VIEAV E + +K+++F L+K C ILA+NTST+D
Sbjct: 354 AVEDRMALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKKGAILASNTSTLD 413
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI M + K I KV V+VG
Sbjct: 414 VNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSADVIKTCMQMAKKINKVAVLVG 473
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR PY + A L+ G +ID I FGLP+GPF G
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYDFGLPMGPFTMG 521
>gi|332141154|ref|YP_004426892.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410861466|ref|YP_006976700.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
gi|327551176|gb|AEA97894.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818728|gb|AFV85345.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
Length = 708
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/531 (38%), Positives = 294/531 (55%), Gaps = 27/531 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
GVA +T+ + PVNAL+ I GL + E A + VKAIV+T + FSGG DI+ F
Sbjct: 14 QQGVATLTMQSAPVNALSRAIRIGLIEGIESALNDASVKAIVVTSSLPIFSGGADISEFS 73
Query: 72 KVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI +
Sbjct: 74 ----GGDLSPMLPEV-----LDKIENATKPVVAVLPGPAFGGGLEVALACHHRITFAGNK 124
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EE 188
+GLPE+ LG++PG GGTQRLPRL + ++EM++ K + KL G+ D + E
Sbjct: 125 VGLPEVNLGILPGAGGTQRLPRLADVQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEH 181
Query: 189 LLKVSRLW----ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
LL+ ++ + D A +R I SL TD E + V Q KK
Sbjct: 182 LLEDTKAYLQGLTPDKAIKRTCDI-SLTMTD------ETKGVFDAVTAQTKKATRGFFAP 234
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C++ + G+ E K+F E + +R H FFA+RA V + D
Sbjct: 235 LKCIEAVRGAYTLAFDDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTP 293
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R + KVA+IG G MG GIA I V + E+ E L KG+ I N +GKL
Sbjct: 294 ERSIEKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKL 353
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
TQ++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTS
Sbjct: 354 TQEQVESRMALLSGTTSYDDLSDVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTS 413
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
T+D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K I+KV V
Sbjct: 414 TLDIDEIATATSRPENVIGLHFFSPANVMKLLEVVKAEKTSAEVIKTCMKMAKRIRKVAV 473
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
+VG C GF NR PY + A L+ G ++D + FG+P+GPF G
Sbjct: 474 LVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMG 524
>gi|395005317|ref|ZP_10389201.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316700|gb|EJE53410.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 699
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/528 (40%), Positives = 297/528 (56%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLATRQGIVDGLGRANADPAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D SL + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH R+AAP + LP
Sbjct: 67 -GTDKSLQ-EPNLLSVIAAIENSAKPVVAAMHTVAMGGGLELALGCHYRVAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ +++ + + SE G KL D +V S E
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSELIGSVPGQKL--FDKLVASPEA 182
Query: 190 LKVSRLWALDIAA--RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L A R P +R+L E + AR K A N P C
Sbjct: 183 LAAEALAFAQSVAEVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNYPAPAKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGMLFEREIFINLMWTPESRALRHLFMAERAASKIPDVPSDTPK-RE 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++ VAVIG G MG GI+ + I V + E E L +G+ TI+ N V +GKL +D
Sbjct: 297 IKSVAVIGAGTMGGGISMNFLNAGIPVKILEAKQEALDRGVATIKKNYEAQVKKGKLKED 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L LDY++ KD D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYAQRMALLTTTLDYADLKDADLVIEAVFEELGVKEAVFKQLDAVMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T + ++G HFFSPA+VM LLE+VR +TS V+ +M +GK IKK VV G
Sbjct: 417 VDKIAAFTKRPEDVVGMHFFSPANVMKLLEVVRGAKTSKDVLATVMAIGKKIKKTSVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDRAVEKFGFAMGPFRMG 524
>gi|407687498|ref|YP_006802671.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407290878|gb|AFT95190.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 707
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 293/529 (55%), Gaps = 27/529 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I GL + A D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVGLIEGINNALDDDSVSAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 190
LPE+ LG++PG GGTQRLPRL ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 191 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALMPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR PY + A L+ G ++D + FG+P+GPF G
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMG 524
>gi|351732218|ref|ZP_08949909.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax radicis
N35]
Length = 699
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 296/527 (56%), Gaps = 19/527 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + G+ D A + V +I++TG GG FSGG DI F
Sbjct: 11 VAVITMANPPVNGLGLATRQGIVDGLSRANADPAVTSIIITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIAGVPGQKL-FDKLAASAESL 183
Query: 190 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ +A +A AR P +R+ E + AR K A N P C+
Sbjct: 184 AAEALAFAQSVADARPLPLVRNFPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ V VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYEAQVKKGKLKQDK 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ + +L L Y +FKD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YDQRMALLSTTLSYDDFKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D A+ FG +GPF+ G
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAVEKFGFAMGPFRMG 524
>gi|326318994|ref|YP_004236666.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375830|gb|ADX48099.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 710
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 277/521 (53%), Gaps = 16/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++ + NPPVNAL + GL EA SR DV+A+++ G G F G DI F K
Sbjct: 19 VLVVRIDNPPVNALGAAVRQGLMAAIGEAESRADVQAVLIVGEGKAFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V IE C K +VAA+ G ALGGGLE+A+ H R+A P QLG
Sbjct: 77 --------PPVEPSLPEVCQRIESCGKRVVAAIHGAALGGGLEVALAAHYRVALPGAQLG 128
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G+ A EMML K ++++ GL+D +V + +
Sbjct: 129 LPEVNLGLLPGAGGTQRAPRLMGVKPAAEMMLSGKPLSAKAALAAGLVDRLVDGSDPVAA 188
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
++ + + P +R + E+ LA AKK+ + Q ++ +
Sbjct: 189 GLACVQELQSAQAP-LRRTRDVAIADKAAAMAELDALAADTAKKSR-GLFSPQKIVECVR 246
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ +E F E + GL+H FFA+R +KVP PR + +A
Sbjct: 247 NAVELDFDEGMQRERAAFMECLASPQRAGLIHAFFAEREVAKVPEAK--AAAPRPITSIA 304
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IGGG MG+GI + + + V + E + L +G +E GLV +G++T D
Sbjct: 305 IIGGGTMGAGITVSALDAGLPVTMIERDDASLARGRAHVEKVYDGLVAKGRMTADAKAAV 364
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 365 MARYTGSTRYEDIAAADLVIEAVFEDLEVKKAVFRELDRVCKPGAVLATNTSYLDIDAIA 424
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +IG HFFSPA++M LLEIV + SA V+ + + +KKVPV G C GF
Sbjct: 425 AATQRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATAFALARTMKKVPVRAGVCDGF 484
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y Q+A L+ G + ID+A+R FG P+GPFQ
Sbjct: 485 IGNRILAVYKQAADYLMEDGASPYEIDAAVRGFGYPMGPFQ 525
>gi|429211033|ref|ZP_19202199.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
gi|428158447|gb|EKX04994.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
Length = 693
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 201/527 (38%), Positives = 286/527 (54%), Gaps = 33/527 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPPVNAL + + AGL F EA + V+A+VL G F G DI F K
Sbjct: 13 VALIKVDNPPVNALGLAVRAGLLRAFREAEADAAVRAVVLVCAGRTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ VV IE KP VA + G ALGGGLE+A+ CH RIA Q+GLP
Sbjct: 73 QA--------PSLPEVVEAIEASAKPSVAVIHGTALGGGLEVALACHYRIARADAQVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GGTQRLPRL G+ +A+EM++ + + + + G++D +V
Sbjct: 125 EVKIGLLPGAGGTQRLPRLAGVGRALEMIVSGNPVKAPQAVEYGILDELVDG-------- 176
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA------PNMPQHQACL 248
D+A + R L + + R+V A L A K A P + C+
Sbjct: 177 ----DLAEAGLAYARRLLDEGRGPRRTGERQVQGDAALIAAKHAEVQKRMPGLFSPLRCV 232
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKP 305
+E G+ +E ++F+E + L+H FFA+R +K+ P T +
Sbjct: 233 AAVEAASRLPLAEGLKRERELFQECLESPQRAALIHAFFAEREAAKIAGLPADTQV---- 288
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R VR AVIGGG MG GIA I V L EV+ L + ++ A + V RG LT
Sbjct: 289 REVRTAAVIGGGTMGVGIALCFANVGIPVKLLEVDGAALDRALQRARATYQASVERGSLT 348
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D L +++GVL+Y+ DVD+ IEAV ES+ +K+++F L+ C P ILA+NTS+
Sbjct: 349 SDAMEKRLGLIQGVLNYAALADVDLAIEAVFESLEVKRQVFERLDAVCKPGAILASNTSS 408
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+DL+ + T ++G HFFSPA+VM LLE+VR TSA+V+ M +GK +KKV V
Sbjct: 409 LDLDAIAAFTRRPQDVVGLHFFSPANVMRLLEVVRGRETSAEVLASAMQLGKRLKKVAVA 468
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VG C GF NR F Y + A L+ G ++D+A+R FG+ +GP
Sbjct: 469 VGVCDGFVGNRMIFQYGRQAEFLLEEGASPAQVDAALRDFGMAMGPL 515
>gi|120612950|ref|YP_972628.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120591414|gb|ABM34854.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
citrulli AAC00-1]
Length = 710
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 275/524 (52%), Gaps = 16/524 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV ++ + NPPVNAL + GL+D EA SR DV+A+++ G G F G DI F
Sbjct: 16 QDGVLVVRIDNPPVNALGAAVRRGLRDAIGEAESRADVQAVLIVGEGKAFIAGADIREFG 75
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE C K +VAA+ G ALGGGLE+A+ H R+A P
Sbjct: 76 K----------PPVEPSLPEVCQRIESCAKRVVAAIHGAALGGGLEVALAAHYRVALPAA 125
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
QLGLPE+ LG++PG GGTQR PRL+G+ A EMML K + + GL+D +V +
Sbjct: 126 QLGLPEVNLGLLPGAGGTQRAPRLMGVKPAAEMMLSGKPLNARAALAAGLVDRLVDGSDP 185
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ ++ A + P R+ R + + A L + + + ++
Sbjct: 186 VAAGLACVRELQAAQAPLRRT--RDVAIADRAAALADLDALAADTARKSRGLFSPLKIVE 243
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + G+ +E F E + GL+H FFA+R +KVP PR V
Sbjct: 244 CVRNAVELPFDEGMQRERAAFMECLASPQRAGLIHAFFAEREVAKVPEAK--AAAPRPVA 301
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+AVIGGG MG+GI + + + V + E + L +G +E GL+ +G++T D
Sbjct: 302 SIAVIGGGTMGAGITVSALDAGLPVTMIERDDASLARGRAHVEKVYDGLIAKGRMTADAK 361
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D++
Sbjct: 362 AAVMARYTGSTRYEDIAAADLVIEAVFEDLEVKKAVFRELDRVCKPGAVLATNTSYLDID 421
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T +IG HFFSPA++M LLEIV + A V+ + K +KKVPV G C
Sbjct: 422 AIAAATGRPRDVIGLHFFSPANIMKLLEIVVPAKVGADVVATAFALAKQLKKVPVRAGVC 481
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y Q+A L+ G + ID+A+R FG P+GPFQ
Sbjct: 482 DGFIGNRILAVYKQAADYLMEDGASPYEIDAAVRGFGYPMGPFQ 525
>gi|339328360|ref|YP_004688052.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
gi|338170961|gb|AEI82014.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
Length = 702
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 291/521 (55%), Gaps = 12/521 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+I + NPPVNALA + G+ + A + ++AIVL G G F G DI F
Sbjct: 12 EDGVALIAVNNPPVNALAAGVREGIMEGIARANADAGIEAIVLLGEGKNFIAGADIRRFG 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
S P VS IE +KP+VAA+ G ALGGGLE A+ CH RIA+P +L
Sbjct: 72 --------SARP-VSTRTSAAAIEASEKPVVAAMHGYALGGGLEHALACHYRIASPDARL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IP GGTQRL R+ G + A++++L + +++ E +LG++DA+V +L
Sbjct: 123 GLPEVNLGIIPAGGGTQRLTRIAGPTAALDVILSGRHVSAGEAQRLGIVDAIVEGIDLKA 182
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ +A D+A++R P R+ ++ + A L AR K + ++ L+ +
Sbjct: 183 AAIRFAKDVASQR-PLPRARDMVQRVAT-DAAMASLDAARKSIAKKSRHVKAPAYALECV 240
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + GV EA+ F EL D ++ L + FFA+R +KVP K + +
Sbjct: 241 QAALTMPFDEGVALEAERFVELESSDEAKALRYAFFAEREAAKVPGAAPAA-KTQRIGSA 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MGSGIA ++ I V + EV+ E L +G++ I+ V RG L+Q +
Sbjct: 300 AVIGAGTMGSGIAMSYADAGIPVKVLEVSREALDRGMQRIQDTYAVRVKRGSLSQGDMDA 359
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++GV Y D D V+EAV E + +KQ+IF L+ P +L TN+S ID++I+
Sbjct: 360 RMALIEGVQSYEAIADCDAVVEAVFERIDIKQEIFGRLDTVMKPGALLLTNSSAIDIDIM 419
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T+ + GAHFF+PA+VM L E+VR +TS + + + M + + + KV V G+C G
Sbjct: 420 ADATARPQDVAGAHFFAPANVMKLCEVVRGSKTSPETVANAMKMARDMGKVCAVAGSCDG 479
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
FA NR+ P L++ G +ID + FG P+GPF
Sbjct: 480 FATNRSRAPMMTETMLMLEEGATPEQIDKVMVDFGYPMGPF 520
>gi|307944786|ref|ZP_07660124.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
gi|307772000|gb|EFO31223.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
Length = 771
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 293/534 (54%), Gaps = 20/534 (3%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP VT+E N + ++ + NPPVNA + + AGL ++ + VK I + G G F
Sbjct: 82 APIVTVETSN-AIGLVAINNPPVNAASQAVRAGLVAAMDQLSVDTSVKVIAMYGVGRTFI 140
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F K +PDV N IE +KP+++ + G ALGGGLE+A+ HA
Sbjct: 141 AGADIREFGK---PPQEPWLPDV-----CNRIEAMEKPVISVLHGNALGGGLEVALATHA 192
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RIA P +G PE+TLG++PG GGTQR PRL G++ +++++ I +E ++GLID
Sbjct: 193 RIALPGLTIGFPEVTLGILPGAGGTQRAPRLAGIAASLDLITTGNRIEAEASHEIGLIDV 252
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + R A+ A + RT +L +++E + + K+ PN+
Sbjct: 253 IADGD-----PRDLAIKFAEQVLSGELETRRTGEL-TVTEDPDAIATVAETLKRKQPNLF 306
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
C++ + I+ G+ KE +F E + GL+H FFA+RA SK+P +
Sbjct: 307 SPHKCVEAVAASILPLS-EGLQKERSLFFECMESPQRAGLIHAFFAERAVSKIPEAKET- 364
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
PR + + VIGGG MGSGIATA +L V+L E + + +G+ I N+ G V RG
Sbjct: 365 --PRTIENIGVIGGGTMGSGIATACLLAGFQVILAERDEAGVERGVSIISGNLDGAVKRG 422
Query: 363 KLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
K+T D+ + L L DY+ F D D+VIEAV E + +K+ +F +L+ C +LAT
Sbjct: 423 KVTADQRDTILSNALSTTTDYAAFSDADLVIEAVFEDMDVKKSVFKQLDAICKDGAVLAT 482
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D+N + TS + +IG HFFSPAHVM LLE+V ++T+ V+ +GK ++K
Sbjct: 483 NTSYLDVNEIAASTSRPEDVIGLHFFSPAHVMKLLEVVVADKTAPDVVATGFALGKRLRK 542
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
+ V G C GF NR Y ++A L+ G +D A+ ++G +GPF G
Sbjct: 543 IAVRAGVCDGFIGNRILNTYKKAADYLMMDGASPEEVDRAMVNYGFAMGPFTVG 596
>gi|295699700|ref|YP_003607593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295438913|gb|ADG18082.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 705
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 284/524 (54%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+ ++++ NPPVNAL + + L+ E A DVKAI+L G G F GG DI F
Sbjct: 14 RDGILVVSVDNPPVNALGAKVRSELRTAIEAAQQNPDVKAILLIGAGRNFIGGADIREFG 73
Query: 72 KVHGAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V S+ V N IE K +VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 K----------PPVPPSLPEVCNRIEASAKLVVAAIHGAALGGGLEVALAAHYRIALSDA 123
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR+PRL+G A+E+ML + + + E LGLID + S ++
Sbjct: 124 KLGLPEVTLGLLPGAGGTQRIPRLLGARAALELMLSGRHVGANEAHALGLIDRIGASGDV 183
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A + R P +R L + +R ++ AR++ + ++ +D
Sbjct: 184 LAEGLAYARSLLTTRAP-VRRACDARGLADRAASRAAIEAARVEVSTKSRHLFSPIKIVD 242
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ + G+ E ++F + + GLVH FFA+RA K P KPR +
Sbjct: 243 AVQAALEMSFDDGLRHERQLFLQCLDSPQRAGLVHAFFAERAAQKAPETRKA--KPRAIA 300
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
V VIGGG MG+GIA A + + V + E + L G +E + L+ +G++T
Sbjct: 301 SVGVIGGGTMGAGIAVALLDAGLSVTMIERDDASLAYGRANVEKVYKALIAKGRMTSQAK 360
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L G Y VD+VIEAV E + +K +F+EL++ C P +LATNTS +D++
Sbjct: 361 AALLARFDGSTSYDALHAVDLVIEAVFEDMAVKHAVFAELDRVCKPGAVLATNTSYLDID 420
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S +IG HFFSPA++M LLE+V + SA V+ + K ++KVPV G C
Sbjct: 421 AIAASVSRPADVIGLHFFSPANLMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVC 480
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A ++ G ++ID A+R FG P+GPFQ
Sbjct: 481 DGFIGNRVLAIYRAAADHMMEDGASPYQIDRAVREFGFPMGPFQ 524
>gi|295688202|ref|YP_003591895.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
gi|295430105|gb|ADG09277.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
Length = 692
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 197/533 (36%), Positives = 293/533 (54%), Gaps = 10/533 (1%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G V ++TL +PPVNAL+ + GLK F+ A + VKAIVL +G
Sbjct: 1 MAAINAVTDFSVEGDVGVVTLNSPPVNALSAVVREGLKGAFDAAIADPAVKAIVLICDGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V +IE+ KP+VAA+ G ALGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQGVIENSPKPVVAAIHGTALGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
H R+A P + GLPE+ +G++PG GGTQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 AHYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTSGQHVPAKAAHAMGL 172
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
D +V L + +A + A +P + DK+ + E+ + R K
Sbjct: 173 FDELVEEGSLRAGAIAFARKVVAENRPLKKVRELNDKVEAARGKPEIFESFRAANAKKFR 232
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ + +E + G+ +E ++F EL+ S +VFFA+R +K+P+V
Sbjct: 233 GFMAPENNIKCVEAAVNLPFDEGLKEERRLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 292
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 293 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGVIRKNYENTA 351
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 352 KKGRLTQDDVEKRMGLLTPSMEMEALADCDMIIEAVFELMEIKKEVFAKLDKIAKPGAIL 411
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D+N + TS + +IG HFFSPA+VM LLE+VR ++TS +VI M + K I
Sbjct: 412 ATNTSYLDVNEIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKEVIATCMKLSKTI 471
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
KV V+VG C GF NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 472 GKVAVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 524
>gi|334345738|ref|YP_004554290.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334102360|gb|AEG49784.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 687
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 291/518 (56%), Gaps = 21/518 (4%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I L +PPVNAL + L A++ D V+AIV+ G G F GG DI F +V
Sbjct: 13 IVLNSPPVNALGGALRRDLAVALRVASADDAVRAIVIRGAGKLFCGGADITEFGQVRAK- 71
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
L+PD+ +N IE KP+VAAV G ALGGGLE+A+GCH RIAA +LGLPE++
Sbjct: 72 --PLLPDL-----INEIESSVKPVVAAVHGSALGGGLEVALGCHYRIAAATAKLGLPEVS 124
Query: 138 LGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-W 196
LG++PG GGTQRLPRLVG+ A++M++L I++ ++GL+D VV E L S + +
Sbjct: 125 LGLLPGAGGTQRLPRLVGVEAALDMIVLGAPISAMRAAEIGLVDEVVDDEVDLAGSAIAF 184
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
A ++ A R+ + ++L AR K+ L A K AC+ I
Sbjct: 185 ARNVGAVRRTRDLPMDAEEQLFEKFAARHARKIDTLDAPK---------ACIAAIRAATE 235
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIG 315
GV E +F ELV S+ L H FFA+RA +K+ N+ DI L+P VR+V VIG
Sbjct: 236 LPFGEGVAHERSLFAELVEGAQSKALCHAFFAERAAAKIDNLPADIALRP--VRRVGVIG 293
Query: 316 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375
G MG GIA + I V + E L +G+ I AN V RG+L ++A A+ +
Sbjct: 294 AGTMGGGIAMNFLSTGIAVTIVETEQAALDRGVGVIRANYGASVARGRLKAEQAEAAMSL 353
Query: 376 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 435
L L + + D D+VIEAV E++ +K++IF L++ P +LA+NTS +D++ + T
Sbjct: 354 LTPTLVFEDLADCDLVIEAVYENMEVKKQIFCRLDQVARPGAMLASNTSYLDIDEIASVT 413
Query: 436 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 495
+ G HFFSPA+VM L+E+VR +TS ++ M + + + KVPVV C GF N
Sbjct: 414 GRPQDVFGLHFFSPANVMKLVEVVRGAQTSLDIVATAMALARKVGKVPVVARVCHGFIGN 473
Query: 496 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
R P A L+ G +ID +FG+P+GPFQ
Sbjct: 474 RMMHPRKVEAFKLLEEGATPAQIDRVHLNFGMPMGPFQ 511
>gi|241763901|ref|ZP_04761944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366796|gb|EER61228.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 699
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 292/528 (55%), Gaps = 21/528 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D A V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLSTRQGIVDGLTRANDDAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D SL + ++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 -GTDKSLQ-EPNLHSVIAAVENSAKPVVAAIHSVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGSIPGQKL--FDKMAASPEA 182
Query: 190 LKVSRLWALDIAA--RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L L A R P +R+L G + AR K + N P C
Sbjct: 183 LAAEALAFAQSVADVRPMPLVRNLPCKHPQGD-----AYFQFARNMVKGMSKNFPAPAKC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKKKFADGLLFERELFINLMWTPESRSLRHLFLAERAASKIPDVPADTPK-RD 296
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++ VAVIG G MG GIA + I V + E+ E L +GI TI+ N V +GKL QD
Sbjct: 297 IKAVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIKKNYEAQVKKGKLKQD 356
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + +L LDY++ KD D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYEQRMALLSTTLDYADLKDADLVIEAVFEELGVKEAVFKQLDAVMKPGAILASNTSTLD 416
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K I+K VV G
Sbjct: 417 VNKIAHFTQRPQDVVGLHFFSPANVMKLLEVVRGDATAKDVLATVMAVAKKIRKTAVVSG 476
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y + L+ G ++D A+ FG+ +GPF+ G
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMEKFGMAMGPFRMG 524
>gi|221067466|ref|ZP_03543571.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220712489|gb|EED67857.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 706
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 290/521 (55%), Gaps = 14/521 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+I + NPPVN L + G+ A + V+A+VL G G F GG DI F
Sbjct: 21 GVALIVIDNPPVNGLGDTVRRGIAQGIARAQASTAVRAVVLRGQGKVFCGGADIRQFNTP 80
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
A S M + V IE C KP+VA + G+ALGGGLELA+ CH R+A ++GL
Sbjct: 81 --AATASPM----LRQVNRSIERCTKPVVACIHGVALGGGLELALACHYRVADSSARMGL 134
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRL+G + A+ ++ K + ++E +LGL+DA+ ++L + S
Sbjct: 135 PEVNLGLVPGGGGTQRLPRLIGAADAVRLITSGKHVEAKEALELGLVDAIF-EDDLEQAS 193
Query: 194 RLWALDIAARRK--PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
++AL +A P + + G L + R A N +A + +
Sbjct: 194 LMFALSMADSHPALPVLADIQAPPPKGELPD----FDRLRTGINPKARNAIAQRAAIQCV 249
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ KE ++F+ELV+ S+ L H+FFA++ +K D + R + +V
Sbjct: 250 RSAMDLPFEQGLDKERELFEELVVGAPSKSLRHIFFAEKEAAKFVG-RDCDVAERQICRV 308
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
++G G MG GIA A I VVL E L +G+ IE N + V+RG LT +
Sbjct: 309 GILGAGTMGGGIAMAFANAGIPVVLCEREQAALDRGMAMIERNYQISVSRGGLTAEAVKE 368
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
++ ++ LD S F +VD+VIEAV E + +K+ +F +L++ C ILATNTS +++N +
Sbjct: 369 RMQHIQQTLDLSAFAEVDLVIEAVFEDMAIKRDVFVQLDRICRKGTILATNTSRLNINEI 428
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T + +IG HFFSPA+VM LLE+VR ERT VI M + I K+PV+VG C G
Sbjct: 429 AAVTQRPEDVIGLHFFSPANVMKLLEVVRGERTCDAVIASCMQMAVAIGKIPVLVGVCEG 488
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR Y + A L+ G V +ID+A+++FG +GP
Sbjct: 489 FVGNRMLTGYWREAGFLLEEGATVQQIDAAMQAFGFAMGPL 529
>gi|418528630|ref|ZP_13094578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371454384|gb|EHN67388.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 705
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 287/528 (54%), Gaps = 13/528 (2%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELRQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADASAAVKAVVIVGEGKAFIAGAD 69
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K +PDV N IE C KP+VA + G ALGGGLE+AM H R+A
Sbjct: 70 IREFGKPPVQ---PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRLAL 121
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P +LGLPE++LG++PG GGTQR PRL+G+ A E+ML + I ++ G GL+D
Sbjct: 122 PGAKLGLPEVSLGLLPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKPDDG 181
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 182 TDPVAAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFSPL 240
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+D ++ + G+ E F + GL+H FFA+R T+K+P +P
Sbjct: 241 KIIDCVQAALDLPFAEGLKFERTQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AAQP 298
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+++
Sbjct: 299 RAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGRMS 358
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ L Y E DVD+VIEAV E + +K+ +F EL++ C +LATNTS
Sbjct: 359 EEAKAAILARYTPSTRYDEIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNTSY 418
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + TS +IG HFFSPA++M LLEIV + + V+ + + +KKVPV
Sbjct: 419 LDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELARKMKKVPVR 478
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 479 AGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 526
>gi|383758293|ref|YP_005437278.1| 3-hydroxyacyl-CoA dehydrogenase [Rubrivivax gelatinosus IL144]
gi|381378962|dbj|BAL95779.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rubrivivax gelatinosus IL144]
Length = 702
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/530 (36%), Positives = 288/530 (54%), Gaps = 23/530 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN L + L E A + V AIV+TG G FSGG DI F
Sbjct: 11 VAVLTLDNPPVNGLGLATRRELSAGLERALAHPAVVAIVVTGAGKVFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ ++ +E KP+VAA+ G +GGGLEL++ CH R+AAP T++ LP
Sbjct: 67 --GTDRAIAEPNLHSLIRQVELAGKPVVAAMHGTCMGGGLELSLACHYRVAAPATKVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR++ + A+ M++ + + SE G KL D +V E L
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLDVETALNMIVSGEPVASELLASVPGQKL--FDQIVEGELL 182
Query: 190 LKVSRLWAL----DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
A P +R L + + AR K A + P
Sbjct: 183 AGAVAFAAAKGHEHAGGAPLPRVRDLK-----ARHANPDAFFQFARNTVKAMARHFPAPA 237
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
C+D +E + +G+ E ++F L+ S+ L H FFA+RA SK+P+V + +
Sbjct: 238 KCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAFFAERAASKIPDVPE-DTQL 296
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + KV V+G G MG GI+ + + V + E +E L +G+ TI N V +GKL
Sbjct: 297 RRIAKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALERGVATIRRNYEAQVRKGKLK 356
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+DK + +L L Y++ D D+VIEAV E + +KQ++F L++ P ILA+NTST
Sbjct: 357 EDKYQQRMALLTTTLSYADLADCDLVIEAVYEDLGVKQQVFGALDEVVKPGAILASNTST 416
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+DLN + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K VV
Sbjct: 417 LDLNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQLAKTIRKTAVV 476
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR YS+ A L+ G ++D A+ +FG +GPF+ G
Sbjct: 477 SGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAFGFAMGPFRMG 526
>gi|220925287|ref|YP_002500589.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219949894|gb|ACL60286.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 692
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 192/519 (36%), Positives = 286/519 (55%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL + PVNAL+ + G++ E A + VKAIVL G G FS G DI F K
Sbjct: 16 VAVLTLQSGPVNALSAALREGIRAAVERAEADQAVKAIVLIGGGRMFSAGADITEFGKPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
++PD+ +N IE +KP++AA+ G ALGGGLE A+ CH R+A P +LGLP
Sbjct: 76 RG---IVLPDL-----LNRIEGARKPVIAAIHGNALGGGLETALACHYRVAVPSAKLGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+VG KA+E+++ I +++ +GL+D + + L +
Sbjct: 128 EVKLGLLPGAGGTQRLPRIVGPRKALEVIVGGAPIGAKQAAAMGLVDEIAPEDSLRAHAV 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + A +P R R D+L + + R + + +AC+ ++
Sbjct: 188 AFAERVVAEGRPLTRIRDREDRLAEGRDDPGLFDAFRRENARRLRGFEAPEACIACVQAA 247
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 313
G+ E + F +LV S +VFFA+R T+++P+V D +P + KV V
Sbjct: 248 CTLPFDQGLAFEREQFLKLVSGSQSAAQRYVFFAERQTARIPDVPEDTPTRP--IAKVGV 305
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GI+ + I V + E E L +G+ I +N +G+L + +
Sbjct: 306 IGAGTMGGGISMNFLNAGIPVTIVETKREALDRGLGIIRSNYETTARKGRLRPEDVETRM 365
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L L+ K D++IEAV E + +K+ IFS L++ P ILA+NTS +D++ +
Sbjct: 366 GLLTDTLELEALKGCDLIIEAVFEDMGIKKDIFSRLDRIAKPGAILASNTSYLDIDEIAS 425
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS +IG HFFSPA+VM LLE+VR RT VI M +G+ I K+PV+VG C GF
Sbjct: 426 VTSRPGDVIGMHFFSPANVMRLLEVVRGARTERDVIATAMQIGRTIGKIPVLVGVCHGFV 485
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + A L+ GV + +D I FGLP+GPF
Sbjct: 486 GNRMLAERQREANRLILEGVKPWDVDRVIYEFGLPMGPF 524
>gi|299529900|ref|ZP_07043328.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298722072|gb|EFI63001.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 705
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 287/528 (54%), Gaps = 13/528 (2%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E A + VKA+V+ G G F G D
Sbjct: 10 VELKQDGDVLLVSVNNPPVNALGAAVRQGLMAAMELADASATVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K +PDV N IE C KP+VA + G ALGGGLE+AM H R+A
Sbjct: 70 IREFGKPPVQ---PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRLAL 121
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P +LGLPE++LG++PG GGTQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 122 PGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKLDDG 181
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 182 ADPVAAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFSPL 240
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+D ++ + G+ E F + GL+H FFA+R T+K+P +P
Sbjct: 241 KIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AAQP 298
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+++
Sbjct: 299 RAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGRMS 358
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ L Y + DVD+VIEAV E + +K+ +F EL++ C +LATNTS
Sbjct: 359 EEAKAAILARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNTSY 418
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 419 LDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVPVR 478
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 479 AGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 526
>gi|254473846|ref|ZP_05087240.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
gi|211956956|gb|EEA92162.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
Length = 717
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 290/529 (54%), Gaps = 16/529 (3%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+V+ E+ D VA++T+ N PVNAL++ I L + ++ + KA V+ G G F G
Sbjct: 10 QVSYELRGD-VAVMTVSNAPVNALSLAIRQDLVARIKQFEEDEVAKAAVIVGEGKVFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F++ +PDV ++ IE C KP++AA+ G+ALGGGLE+A+GCH R+
Sbjct: 69 ADIREFKR---PATEPHLPDV-----IDGIEACSKPVIAAIHGVALGGGLEVALGCHFRV 120
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
++GLPE+ LG+IPG GGTQRLPRL G KA+EM+ I ++ G++D V
Sbjct: 121 GVKGAKVGLPEVHLGIIPGAGGTQRLPRLAGYEKALEMIPSGAPIGADAAKAAGILDGVS 180
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ + +A + P L R +L + + +V A+ K A
Sbjct: 181 EEADAVAAGLAFARSVIDNGTP----LRRCSELVAPAVDAQVFADAKAAVAKRARGQKSP 236
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C++ IE G+ KE ++F EL R L H FFA RA K+P + G+
Sbjct: 237 VVCVEAIEMASQTSFADGMAKEREMFMELKNSAQHRALAHAFFADRALGKLPEIE--GIA 294
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++ + VIGGG MG+GIAT ++N + V L E + E L + TI NV G V +GKL
Sbjct: 295 PRTLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDEGLGRAKATIAKNVGGAVKKGKL 354
Query: 365 TQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ ++ + L DY DVD+V+EAV E + +K+++F +L++ C +LATNT
Sbjct: 355 SAEQEQRIFDEALSLSTDYVSLSDVDLVVEAVFEDIDVKKQVFQKLDEVCKEGAVLATNT 414
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + T +IG HFFSPAH+M LLE+V ++T+ VI +GKI++KV
Sbjct: 415 SYLDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFQLGKIMRKVA 474
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V G C GF NR Y +A +V G F +D + FG P+GP+
Sbjct: 475 VRAGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDDVMLEFGFPMGPY 523
>gi|70728857|ref|YP_258606.1| enoyl-CoA hydratase [Pseudomonas protegens Pf-5]
gi|68343156|gb|AAY90762.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas protegens Pf-5]
Length = 706
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/519 (37%), Positives = 285/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL NPPVNAL + + GL + A V AI+L G G F GG DI F
Sbjct: 18 ILVLTLDNPPVNALGVEVRRGLLAAMDSAADDPTVAAILLVGAGRHFCGGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ VV IED KP+VAA++G+ALGGGLE+A+ H R+A +LGLP
Sbjct: 74 --GQTPQAP--ALPAVVKRIEDSAKPVVAAIQGVALGGGLEVALAAHYRLALGSARLGLP 129
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL+G A+E+ML + + + E LG++D + E+ L
Sbjct: 130 EVLLGLLPGAGGTQRLPRLIGARAALELMLSGRHLNAREALDLGVVDRLAEGEDALAAGL 189
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A ++ +R LG RE + AR Q A + Q + +E
Sbjct: 190 AYARELVDSHA-GVRRTRDARALGDQHLQREQINAAREQLTHKAKGLLSPQNIIRAVEAA 248
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ +E ++F+E + GLVH FFA+R K P T I +PR + +VAV+
Sbjct: 249 LDRPFDQGLEEERRLFQECLDSPQRAGLVHAFFAEREVLKAPE-TRIA-QPRPIEQVAVV 306
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA + + + V + E + + L +G +E GL+ +G+L L
Sbjct: 307 GGGTMGAGIAVSALDAGLQVTMIERDQQALDRGRGNVEKVYDGLIEKGRLDAAGKAATLA 366
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ LDY + D+VIEAV E + KQ +F EL++ C P +LA+NTS +DLN + +
Sbjct: 367 RFRASLDYQDLARADLVIEAVFEDMAAKQAVFKELDRVCKPGAVLASNTSYLDLNAIADS 426
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
S +IG HFFSPA++M LLEIV + + V+ + K ++KVPV G C GF
Sbjct: 427 VSRPADVIGLHFFSPANIMKLLEIVVPAKVAPDVVATAFELAKKLRKVPVRAGVCDGFIG 486
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y Q+A ++ G ++ID A+R FG P+GPFQ
Sbjct: 487 NRILAVYRQAADYMMEDGASPYQIDQALRDFGFPMGPFQ 525
>gi|221065494|ref|ZP_03541599.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220710517|gb|EED65885.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 705
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 288/528 (54%), Gaps = 13/528 (2%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELKQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADASAAVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K +PDV N IE C KP+VA + G ALGGGLE+AM H R+A
Sbjct: 70 IREFGKPPVQ---PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRLAL 121
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P +LGLPE++LG++PG GGTQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 122 PGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLLDKLDDG 181
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 182 ADPVVAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFSPL 240
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+D ++ + G+ E F + GL+H FFA+R T+K+P +P
Sbjct: 241 KIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AAQP 298
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+++
Sbjct: 299 RAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGRMS 358
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + Y + DVD+VIEAV E + +K+ +F EL++ C +LATNTS
Sbjct: 359 EEAKAAIMARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKRGAVLATNTSY 418
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 419 LDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVPVR 478
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 479 AGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 526
>gi|407683514|ref|YP_006798688.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
gi|407245125|gb|AFT74311.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
Length = 707
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 293/529 (55%), Gaps = 27/529 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I L + A D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVWLIEGINNALDDDSVSAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 190
LPE+ LG++PG GGTQRLPRL + ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADVQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 191 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALTPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR PY + A L+ G ++D + FG+P+GPF G
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMG 524
>gi|333916713|ref|YP_004490445.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333746913|gb|AEF92090.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 705
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 294/527 (55%), Gaps = 22/527 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ V ++++ NPPVNAL + AGL E+A S VKA+++ G G F G DI F
Sbjct: 15 DGAVLVVSINNPPVNALGQAVRAGLLAAVEQAESDAAVKAVLIVGEGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K MP S+ V+N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 K-------PAMPP-SLPEVLNRLEASDKIVVAAIHGPALGGGLEVAMSAHYRLALPAAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-----TS 186
GLPE+ LG++PG GGTQR PRL+G+ A ++ML K ++++ GL+D +V T+
Sbjct: 127 GLPEVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAALAAGLVDKLVDGTDATA 186
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
L+ + L A + A RR R + DK +L+E + LA AKK+ +
Sbjct: 187 AGLVYANELLASNTAPRR---TRDIEIADKAAALAE---LDALAAETAKKSR-GLFSPLK 239
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
++ + + G+ KE +F E + GL+H FFA+R T+K+P PR
Sbjct: 240 IVECVRAAVELPFDEGIAKERALFVECLNSPQRAGLIHAFFAERETAKIPEAK--AAAPR 297
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
K+AVIGGG MG+GI + + + V + E ++E + +G +E GL+ +G++T+
Sbjct: 298 HFAKIAVIGGGTMGAGITVSALDAGLTVTMIERDAESIARGQANVEKVYNGLIAKGRMTE 357
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C P +LATNTS +
Sbjct: 358 EAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYL 417
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 418 DIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKRMKKVPVRA 477
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A ++ G + ID A+R FG P+GPFQ
Sbjct: 478 GVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQ 524
>gi|357973934|ref|ZP_09137905.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. KC8]
Length = 679
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 294/529 (55%), Gaps = 18/529 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+T E D V ++ NPPVNAL + GL EEA + VKA+V+ +G F G
Sbjct: 3 ITTERTGD-VLVVVSNNPPVNALGHAVRLGLAKAIEEAAADPAVKAVVIRCDGRTFFAGA 61
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K M D + ++ +E KP+VAA+ G ALGGGLE A+ CH RIA
Sbjct: 62 DITEFGKP--------MQDPQLPEMLEALEASGKPVVAAIHGTALGGGLETALACHYRIA 113
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P ++GLPE+ LG++PG GGTQRLPR+VG + A+EM++ I +++ +GLID + T
Sbjct: 114 VPSAKMGLPEVKLGILPGAGGTQRLPRVVGAAAALEMIVGGAPIGAKKALDVGLIDRLAT 173
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
L + +A +IA +R L RT + +++E V + R + +
Sbjct: 174 EGNLAAEAIAFAQEIAD-----VRPLPRTSEKTAVAEPG-VFEAFRAANARKMKGFEAPE 227
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 304
AC+ I+ + G+ E + K LV D S+ H+FFA+RA +KV + D L
Sbjct: 228 ACITAIKAAVELPFAEGLEVERGLIKTLVASDQSKAQRHIFFAERAAAKVDGLPADTPLI 287
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P V+ V VIG G MG GIA + I V + E+ E L +G+ T+ N V G++
Sbjct: 288 P--VQSVGVIGAGTMGGGIAMNFLSIGIPVTILEMKQEALDRGVATVAKNYANNVKSGRM 345
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
TQ++A+ A+ +LK L Y + D++IEAV E++ +K+++F++L+K ILA+NTS
Sbjct: 346 TQEQADKAVALLKPTLSYDDLGAADLIIEAVFENMDVKKEVFAKLDKVAKAGAILASNTS 405
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D++ + TS + ++G HFFSPA+VM LLE+VR +TS V+ M++ K IKK+ V
Sbjct: 406 YLDVDEIAAVTSRPEYVLGMHFFSPANVMKLLEVVRGAKTSDSVLATAMSLAKSIKKIAV 465
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V G C GF NR P A L+ G +D FG P+GPFQ
Sbjct: 466 VAGVCYGFIGNRMLKPRQDQAGQLILEGAKPSDVDRVFLDFGFPMGPFQ 514
>gi|407939373|ref|YP_006855014.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407897167|gb|AFU46376.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 699
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 295/527 (55%), Gaps = 19/527 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + G+ D A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITMANPPVNGLGLATRQGIVDGLGRANADAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIAGVPGQKL-FDKMAASAESL 183
Query: 190 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ +A +A AR P +R+L E + AR K A N P C+
Sbjct: 184 AAEALEFAQSVADARPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDK 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ +L L Y + KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YEQRMALLSTTLSYDDLKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMG 524
>gi|427404633|ref|ZP_18895373.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
gi|425716804|gb|EKU79773.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
Length = 696
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 285/523 (54%), Gaps = 17/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + + + A S VKAIVLTG G FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRSAAVQGVQAAESDPAVKAIVLTGAGKAFSGGADIREFNSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + ++ ++ ++E KP+VAA+ +A+GGGLELA+GCH R+A P Q+ LP
Sbjct: 71 A------LTEPTLHSLIRVVEGSSKPVVAAIHSVAMGGGLELALGCHYRVALPGAQIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 193
E+ LG+IPG GGTQRLPR++GL KA+ M+L + SE+ L D V + ELL +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGLEKALGMILGGIPMLSEKLAGTPLFDEVFQAGAELLPAA 184
Query: 194 RLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A IA R P +R D++ +A L AR Q A P +AC++ +
Sbjct: 185 IAYAERIADLRPLPKVR-----DRVVEHPDAAGFLASARAQVDAAAGPFPAPRACVEAVA 239
Query: 253 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
+ + L+ E + F +L S+ L H FFA+RA KVP+V D L R +
Sbjct: 240 ASVTADSFEDGLRFERERFIQLTTTSESKALRHAFFAERAAGKVPDVPADTPL--RSIAS 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
AV+G G MG GIA I V L E + L +G+ + V++GKL ++
Sbjct: 298 AAVVGAGTMGRGIAMNFANAGIPVTLLETKQDALDQGLAAMRKLYESGVSKGKLKPEQLE 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ G L Y D+V+EAV E + +K+ +F EL+K P ILATNTST+D+N
Sbjct: 358 QRMALVTGTLSYDAIAQADIVVEAVFEDIGVKELVFRELDKVMKPGAILATNTSTLDVNR 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T +IG HFFSPAHVM LLEIVR RT V+ + + K ++K+ VV G C
Sbjct: 418 IAAFTRRPQDVIGLHFFSPAHVMKLLEIVRGARTGKDVLATALALSKKLRKIGVVSGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A L+ G ++D AI +FG +GPF+
Sbjct: 478 GFIGNRMLEQYLRQAVFLLEEGALPEQVDRAIEAFGFAMGPFR 520
>gi|410635272|ref|ZP_11345887.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
gi|410145245|dbj|GAC13092.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
Length = 706
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 303/543 (55%), Gaps = 26/543 (4%)
Query: 1 MAAPRVTMEVG-NDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG 58
M+A + T+ V N G A+I + N PVNAL+ + GL + E A + +VK IV++
Sbjct: 1 MSAEQSTVVVSQNQGETALIMMQNAPVNALSKAVRVGLIAEIEAALNNANVKVIVISSQL 60
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G FSGG DI+ F + L P++ V++LIE+ KP+VA + G A GGGLELA+
Sbjct: 61 GLFSGGADISEFSSGN------LQPNLPE--VLDLIENANKPVVAVLNGPAFGGGLELAL 112
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
CH RI+ ++GLPE+ LG++PG GGTQRLPRL G+++A++M++ K + + G
Sbjct: 113 ACHYRISFADNKVGLPEVNLGILPGAGGTQRLPRLTGVAQALDMIVSGKPVKA--AALNG 170
Query: 179 LIDAVVT------SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL 232
+ D +V SE V++L +R I ++ + + E+ R
Sbjct: 171 VFDLIVDDPAKLMSESQAFVAQLINDGCEIKRVKDI-------EIDTETAPSELFSQYRQ 223
Query: 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292
K A + C+ +E + G+ KEA++F E + +R H FFA++A
Sbjct: 224 GIAKQARGFFSPERCIQAVEAAVTLPLKDGLQKEAELFMECMRSPQARAQQHFFFAEKAA 283
Query: 293 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352
V + D R ++ V +IG G MG GIA I VV+ E+ +E L KG+ I
Sbjct: 284 GHVSDY-DKSTPVRDIKSVGIIGAGTMGGGIAMNFANAGIPVVMLELKAEALEKGLGVIR 342
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
N +GKL+Q + + +L G +YS DVD+VIEAV E + +K+++F++L+
Sbjct: 343 RNYENSAKKGKLSQQDLEDRMALLHGTTEYSGLADVDLVIEAVFEKMDVKKQVFTQLDAI 402
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C ILA+NTST+D+N + + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI
Sbjct: 403 CKKGAILASNTSTLDINEIADCTSRPEDVIGLHFFSPANVMKLLEVVKGEKTSADVIKTS 462
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
M + K I+KV V+VG C GF NR PY + A ++ G D +D I FGLP+GPF
Sbjct: 463 MQLAKKIRKVAVLVGVCFGFVGNRMIEPYGREANRMMLEGADPEHVDRVIYDFGLPMGPF 522
Query: 533 QEG 535
G
Sbjct: 523 TMG 525
>gi|264679896|ref|YP_003279805.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262210411|gb|ACY34509.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 705
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 288/528 (54%), Gaps = 13/528 (2%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELRQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADANAAVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K +PDV N IE C KP+VA + G ALGGGLE+AM H R+A
Sbjct: 70 IREFGKPPVQ---PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRLAL 121
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P +LGLPE++LG++PG GGTQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 122 PGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKLEEG 181
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ + +A ++ A+ +R + T +L + A+ L R K + +
Sbjct: 182 TDPVAAGLAYARELLAQGAS-LRPVSATPGRLADKAAAQAELDALRADTTKKSRGLFSPL 240
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+D ++ + G+ E F + GL+H FFA+R T+K+P +P
Sbjct: 241 KIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AAQP 298
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+++
Sbjct: 299 RAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGRMS 358
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + + Y + DVD+VIEAV E + +K+ +F EL++ C +LATNTS
Sbjct: 359 EEAKASIMARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNTSY 418
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 419 LDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVPVR 478
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 479 AGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 526
>gi|222112189|ref|YP_002554453.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221731633|gb|ACM34453.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 705
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 284/521 (54%), Gaps = 16/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++++ NPPVNAL + AGL E+A V+A+++ G G F G DI F K
Sbjct: 18 VLVVSINNPPVNALGQAVRAGLLAAVEQAEGDAAVRALLIVGEGKAFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N +E C K +VAA+ G ALGGGLE+A+ H R+A P LG
Sbjct: 76 --------PPVPPSLPEVCNRLESCGKLVVAAIHGAALGGGLEVALSAHYRLALPAASLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G+ A E+ML K ++++ GL+D +V + +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGVKAAAELMLSGKHLSAKAAAAAGLVDRLVEGTDPVAA 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A ++ A+ R+ R K+ + AR L L+ K + ++ +
Sbjct: 188 GLAYANELLAQGAQPRRT--RDLKIADQAAARAELDALALETAKKTRGLFSPGKIVECVR 245
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ KE +F E + +GLVH FFA+R T+K+P PR K+A
Sbjct: 246 AAVELPFDEGIAKERALFVECLNSPQRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIA 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IGGG MG+GI + + + V + E ++E + +G K +E GL+ +G++T +
Sbjct: 304 IIGGGTMGAGITVSALDAGLTVTMIERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAI 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L Y + DVD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 364 LARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV G C GF
Sbjct: 424 AATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 484 IGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 524
>gi|91784409|ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91688363|gb|ABE31563.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
Length = 706
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 285/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAVEAADADSAVQAVLIVGAGRNFIAGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P ++ V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 74 --GKPPLPP--ALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLGLP 129
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR PRL+G A++++L + +++E LGLID + +S ++L
Sbjct: 130 EVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALALGLIDRLGSSGDILAEGL 189
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ ++ A P +R G + + + AR + K + + +D +E
Sbjct: 190 AYVHELLAAHAP-VRRTRDAVAPGDRAASLAAVTAARAETAKKSRGLFSPLKIVDAVEAA 248
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
I G+ E K+F E + GL+H FFA+R K P D KPR + + V+
Sbjct: 249 IEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALNAIGVV 306
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA A + + V + E + L +G+ IE GL+ RG+++ +K +
Sbjct: 307 GGGTMGAGIAVAVLDAGLPVTMIERDDASLARGLAHIEKVYDGLIARGRMSAEKKAAVMT 366
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
G Y D D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 367 RWNGSTSYDALTDADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAS 426
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
S +IG HFFSPA++M LLE+V +R SA V+ + K ++K PV G C GF
Sbjct: 427 ISRPADVIGLHFFSPANIMKLLEVVVPKRVSADVVATAFELAKKLRKTPVRAGVCDGFIG 486
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 487 NRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|226362027|ref|YP_002779805.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
gi|226240512|dbj|BAH50860.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
Length = 687
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 289/529 (54%), Gaps = 28/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VAII L NPPVN L + G+ A + +V++IVLTG+G FS G DI F
Sbjct: 11 VAIIRLDNPPVNGLGLSTRQGILRDLSRALNSPEVESIVLTGDGKFFSAGADITEFGTPR 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + SL V+ +ED KP+VAA+EG GGGLELA+G H R+AA +GLP
Sbjct: 71 SSEEPSL------RTVIAALEDSAKPVVAALEGTCFGGGLELALGAHYRVAAKTATVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMML-----LSKSITSEEGWKLGLIDAVVTSEEL 189
E+TLG++PG GGTQRLPR++ + A EM+ + + ++ G +L D VV S+ +
Sbjct: 125 EVTLGLVPGAGGTQRLPRVLTVRSAAEMITGGSPRRAGVLAADPGQRL--FDRVVDSDTI 182
Query: 190 LKVSRLWALDIAARRKPWIRSLH--RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ + + P IR L + LG L R Q K +
Sbjct: 183 TAAIQFAGEMAVSGKCPRIRDLEVIGDEDLGPL----------RAQLTKRSRGFEAPLVA 232
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPR 306
LD++E G+ E F ELV D S L H FFA+R K+P + D ++P
Sbjct: 233 LDLVERARSVPFAEGLDAERAAFLELVGGDQSAALRHAFFAERTARKIPGLDPDTTVRP- 291
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
VR+VAV+G G MG GIA + I V++ E + E L +G+ TI N + V +GKLT
Sbjct: 292 -VREVAVVGAGTMGGGIAMNFLNAGIPVIVLETSQEPLARGLATIRRNYQAQVDKGKLTP 350
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ + +L+ +DY++ D D+ IEAV E + +K+ +F+EL++ P ILA+NTST+
Sbjct: 351 EAMEQRMGLLRPTVDYADLADCDLAIEAVFEDMDVKRAVFTELDEVMKPGAILASNTSTL 410
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + T ++G HFFSPA+VM LLEIVR ++T+ V+ + VG+ I KV VV
Sbjct: 411 DVDTIAAFTRRPADVVGMHFFSPANVMTLLEIVRADKTADDVLATVSAVGQRIGKVTVVS 470
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR Y +A L+ G RIDSAI FG +GP++ G
Sbjct: 471 GVCDGFIGNRMLARYRGAANALLEAGASPERIDSAIEDFGYAMGPYRVG 519
>gi|83312089|ref|YP_422353.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
gi|82946930|dbj|BAE51794.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
Length = 703
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 289/527 (54%), Gaps = 17/527 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ V +D +A +T+ +PPVNA P+ AGL+ F + +R D A+++ G F G
Sbjct: 5 VTLSV-SDRIATVTIDSPPVNAADHPVRAGLQKVFTDLAARSDYDAVLVLCAGRTFMAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F D + +L NL+E+C KP+VAA+ G ALG G ELAM CH RIA
Sbjct: 64 DIGEF-------DTGIKAPHHQDLF-NLVENCAKPVVAALHGTALGAGTELAMACHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPEL+LG+IPG GGTQR PRL+GL A++++L K + + + +LGL+D + +
Sbjct: 116 DKGARIGLPELSLGIIPGAGGTQRAPRLIGLDAAMDLVLSGKPLPAPKAAELGLVDEIAS 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR--EVLKLARLQAKKTAPNMPQ 243
+ +A + + RT + A+ E++ + Q KT N
Sbjct: 176 GDLNAAALAFAKKLVAEGK-----GVRRTCDMAPKDAAKDAEIIAARQAQVAKTMKNRTS 230
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
L+ + G+ EA + K+L +R + H+FFA R K+P +T +
Sbjct: 231 PLKALEAMAATTTLSFAEGLRLEADISKQLEHAVEARAMRHLFFADREVRKIPGITK-DI 289
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
K R +RKV +IG G MG GIA I V + +V+ E L +G+ I N V+RG
Sbjct: 290 KARPIRKVGIIGAGTMGGGIAMCFANIGIPVTIIDVSDENLQRGLGVIRKNYERSVSRGS 349
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LTQ++ + + +L DY+ KD D+ IEAV E + LK+ IF++L+ P IL TNT
Sbjct: 350 LTQEQLESRMGLLSASTDYAALKDADLAIEAVFEKMELKKDIFAKLDAVLPAGAILGTNT 409
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
ST+D++ + T +IG HFFSPA+VMPLLEIV+ ++T+ V+L + + K+IKK
Sbjct: 410 STLDIDEIANTTKRPADVIGLHFFSPANVMPLLEIVQGKQTAMDVLLTALDMAKLIKKTG 469
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
VV C GF NR PY + A +V G ID A+ +G+ +G
Sbjct: 470 VVSKVCYGFIGNRMMDPYGREAERMVLEGATPAEIDGALEGWGMAMG 516
>gi|167644779|ref|YP_001682442.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. K31]
gi|167347209|gb|ABZ69944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Caulobacter sp. K31]
Length = 692
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/519 (36%), Positives = 284/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL +PPVNAL+ + GLK F+ A + V+AIVL G F G DI F K
Sbjct: 16 IGVVTLNSPPVNALSAAVREGLKGAFDAAIADPAVRAIVLICEGKTFIAGADITEFGKA- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M S++ V N IE+ KP++AA+ G LGGGLE+A+ H R+A P + GLP
Sbjct: 75 -------MTGPSLQDVQNTIENSPKPVIAAIHGTVLGGGLEVALVAHFRVAVPSAKAGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GGTQRLPR+VG+ KA+EM+ + + ++ +GL D++V L +
Sbjct: 128 EVNIGLLPGAGGTQRLPRVVGVEKALEMVTTGQHVPAKAALAMGLFDSLVEEGALRDGAI 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + A KP R + K+ + E+ R + + + IE
Sbjct: 188 AFARVVLAEDKPLTRIRDQNAKVEAARGKPEIFSEFRAANARKFRGFLAPENNIKCIEAA 247
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 313
+ G+ +E ++F EL+ S HVFFA+R +K+P+V D + P V+KV V
Sbjct: 248 VNLPFDEGLKEERRLFMELMTGTQSAAQRHVFFAERQAAKIPDVPDDTPIIP--VKKVGV 305
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GI+ + I V + E E L +G+ I N +G+LTQD +
Sbjct: 306 IGAGTMGGGISMNFLNAGIPVTIIEAKQENLDRGVGVIRKNYENTAKKGRLTQDDVEKRM 365
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L + + D D++IEAV E + +K+++F +L+ P ILA+NTS +DL+++
Sbjct: 366 ALLTPSMHLEDLTDCDLMIEAVFELMEIKKEVFGKLDTIAKPGAILASNTSYLDLDVIAA 425
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS +IG HFFSPA+VM LLEIVR +T VI M +GK I KV V+VGNC GF
Sbjct: 426 STSRPQSVIGLHFFSPANVMKLLEIVRGAKTDKSVIATAMRIGKTIGKVAVLVGNCHGFV 485
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 486 GNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 524
>gi|160896840|ref|YP_001562422.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160362424|gb|ABX34037.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 705
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 293/527 (55%), Gaps = 22/527 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ V ++++ NPPVNAL + AGL E+A S VKA+++ G G F G DI F
Sbjct: 15 DGAVLVVSINNPPVNALGQAVRAGLLAAVEQAESDAAVKAVLIVGEGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K MP S+ V+N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 K-------PAMPP-SLPEVLNRLEASDKIVVAAIHGPALGGGLEVAMSAHYRLALPAAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-----TS 186
GLPE+ LG++PG GGTQR PRL+G+ A ++ML K ++++ GL+D +V T+
Sbjct: 127 GLPEVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAALAAGLVDKLVDGTDATA 186
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
L + L A + A RR R + DK +L+E + LA AKK+ +
Sbjct: 187 AGLAYTNELLATNTAPRR---TRDIEIADKAAALAE---LDALAADTAKKSR-GLFSPLK 239
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
++ + + G+ KE +F E + GL+H FFA+R T+K+P PR
Sbjct: 240 IVECVRAAVELPFDEGIAKERALFVECLNSPQRAGLIHAFFAERETAKIPEAK--AAAPR 297
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
K+AVIGGG MG+GI + + + V + E +++ + +G +E GL+ +G++T+
Sbjct: 298 HFAKIAVIGGGTMGAGITVSALDAGLTVTMIERDADSIARGQANVEKVYNGLIAKGRMTE 357
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C P +LATNTS +
Sbjct: 358 EAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYL 417
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 418 DIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKRMKKVPVRA 477
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A ++ G + ID A+R FG P+GPFQ
Sbjct: 478 GVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQ 524
>gi|115352985|ref|YP_774824.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115282973|gb|ABI88490.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 711
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 277/524 (52%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLSDALDAAQTDDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCEQIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 129
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + +++E LGLID + S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLIDRLAHSDDT 189
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R+ +S + KK+ + +D
Sbjct: 190 LAEGLAYAQELVSLGAPARRTRDARGLADRVSAQAAIDAARADLPKKSR-GLFSPAKIVD 248
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 249 AVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 306
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEAALARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA+V+ + K +KK PV G C
Sbjct: 427 ELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSAEVVATAFALAKQLKKTPVRAGVC 486
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 530
>gi|410632204|ref|ZP_11342868.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410148204|dbj|GAC19735.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 710
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 195/525 (37%), Positives = 292/525 (55%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N+ VA + + NPPVNAL+ + GL + A + + V IV++ FSGG DI+ F
Sbjct: 20 NNKVAALWMQNPPVNALSKSVRVGLIEHLNAAIADESVDVIVISSKQNLFSGGADISEFS 79
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
GD L P++ V V+++IE+ KP+VA + G A GGGLE+A+ CH R+ ++
Sbjct: 80 ----GGD--LEPNLPV--VLDVIENSPKPVVAVLNGPAFGGGLEVALSCHYRVTFASNKV 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTSEELL 190
GLPE+ LG++PG GGTQRLPRL G+ +A++M++ + + ++ KL G+ D VV S E L
Sbjct: 132 GLPEVNLGILPGAGGTQRLPRLAGVQQALDMIVSGRPVAAK---KLPGVFDVVVDSPETL 188
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
S L + +R ++ + +E+ R A + C+
Sbjct: 189 LSSALAFCEKVVAEGSKVRKTCDV-QIDVSTAPKELFAQYRKGLATQARGFFAPERCIQA 247
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+E + G+++E ++F E + +R H FFA+RA S V + D R ++
Sbjct: 248 VEASVELPFAEGLVREGELFMECMRSKEARAQQHFFFAERAASHVKDF-DKETPVRDIKT 306
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V +IG G MG GIA I V++ E+ E L KG+ I N +GKLT ++
Sbjct: 307 VGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTAEQVE 366
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + +L G +Y+ DVD+VIEAV E + +KQ++F L+ C P ILA+NTST+D++
Sbjct: 367 DRMALLTGSTEYAALSDVDLVIEAVFEKMSVKQEVFKALDAVCKPGAILASNTSTLDIDE 426
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+GE T + +IG HFFSPA+VM LLE+V+T +TS +VI M + K I KV V+VG C
Sbjct: 427 IGEATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTAMKMAKKINKVAVLVGVCF 486
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR Y + A ++ G ID I FGLP+GPF G
Sbjct: 487 GFVGNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMG 531
>gi|294899893|ref|XP_002776796.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
gi|239883997|gb|EER08612.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
Length = 733
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/531 (36%), Positives = 299/531 (56%), Gaps = 15/531 (2%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++ + DGVA++TL NPPVNAL+ L + + VK IV+TG G FSGG +
Sbjct: 4 SIYIRQDGVAVLTLRNPPVNALSQAHCKSLVQNMKLLQANRTVKGIVITGEGKFFSGGAE 63
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F+ H V + + LV+N I+ KP+VAA+ G+ALGGG E+A+ H R+A
Sbjct: 64 IMEFE-YHIRKGVKMNMAEGIHLVMNTIDQTDKPVVAAINGMALGGGFEVALASHYRVAV 122
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P ++GLPE+ LG++PG GTQRLPRL G+ A++ ML + I + + +ID +V +
Sbjct: 123 PTVKVGLPEVNLGLLPGGQGTQRLPRLAGVQVALQTMLGGQPIPAALAKRQKMIDEIVPA 182
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKTAPNMPQH 244
++L+ + AL RR + + D++ + A E + ++ R + + AP
Sbjct: 183 DKLIDAAAAIALTKPVRRTSEM-TCSTADRVMVVGGAVEMGINQIDRFRKHQIAP----- 236
Query: 245 QACLDVIEEGIVHGG--YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+A ++ + G G E + F +L+ S L H+FFA+R +KV + +
Sbjct: 237 EAIGRCVKAAVESGADFQKGCRVEQEEFDKLLYSKESGALRHLFFAERIANKV---SGLR 293
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
KP ++KV V+G GLMG GIA + + VVL + E+L +G+ I+ N V R
Sbjct: 294 AKPLPIKKVGVVGAGLMGGGIAMCFVAKGMPVVLLDAKEEFLSRGMGLIKKNYETSVARK 353
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
L ++A LK++K LDY++F D D+VIEAV E++ LKQ IF +L+K P +L +N
Sbjct: 354 SLKLEEAAKRLKLIKPSLDYADFGDCDIVIEAVFENLKLKQDIFKQLDKVTKPDALLCSN 413
Query: 423 TSTIDLNIVGEKTSSQ-DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
TS++D++ + + ++G HFFSPA+VM LLE VRT+ S I +M +GK+I K
Sbjct: 414 TSSLDIDAIASMVPKRAANVVGTHFFSPANVMKLLENVRTKGASDTTIATVMAMGKLINK 473
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V V+VGNC GF NR PY R +V G D+ D+ FG+ +GP
Sbjct: 474 VAVLVGNCDGFVGNRMLGPYGAEVRQMVEEGGDLAEFDAVAVDFGMAMGPL 524
>gi|170700585|ref|ZP_02891585.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170134491|gb|EDT02819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 693
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 287/529 (54%), Gaps = 26/529 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D VA+ITL NPPVN L + + A + DV+AIV+TG FS G DI F
Sbjct: 8 HDDVAVITLDNPPVNGLGHATRLAIVEVMAAAAADADVRAIVITGADSGFSAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + S+ V+ IE KP+VAA+ +A+GGGLELAMGCH R+ P Q+
Sbjct: 67 -----GTPKATQEPSIHTVIRAIESSAKPVVAAIHSVAMGGGLELAMGCHFRVVTPGAQI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LGV+PG GGTQRLPR VGL A++M++ + + SE+ GL D ++ + L
Sbjct: 122 ALPEVKLGVLPGAGGTQRLPRAVGLEAALDMIVSGRIVRSEKLADTGLFDLIIEGDLLTG 181
Query: 192 VSRLWALDIAARRK-PWIRS--LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
R +A A R + P +R + + G L AR + A + N P C+
Sbjct: 182 AVR-FAQQAADRNELPRLRDRRIEHVNPDGFLQFARNTIATA-------SRNFPAPFKCV 233
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 305
D ++ + G+ E K+F EL+ SR L H FF +RA +K+P+ L P
Sbjct: 234 DAVQASVQQAFDDGIKFERKLFMELMDTSESRALRHAFFGKRAGAKIPD-----LPPDTP 288
Query: 306 -RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R V +VAV+G G MG+GIA + + V + E + L +G+ I N +GKL
Sbjct: 289 VRTVTQVAVVGAGTMGAGIAMNFLSAGLQVTILETRQDALERGVAAIRKNYDDNARKGKL 348
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
TQ++ + +L L Y + + D++IEAV E + +K+ +F EL+ ILA+NTS
Sbjct: 349 TQEQVEQRMSLLTPTLSYDDLRHADLIIEAVFEEMSVKESVFRELDAVAKHGAILASNTS 408
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
T+D++ + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M++ + I K V
Sbjct: 409 TLDVDKIAAFTKRPCDVVGMHFFSPANVMELLEVVRGEKTAHDVLATVMSLARKIGKTAV 468
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V G C GF NR Y + A L+ G +ID AI FG +GPF+
Sbjct: 469 VSGVCDGFIGNRMINQYLRQAGYLLDEGALPEQIDRAIEKFGFAMGPFR 517
>gi|399546209|ref|YP_006559517.1| peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
gi|399161541|gb|AFP32104.1| Peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
Length = 697
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 283/518 (54%), Gaps = 10/518 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ + K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLIAALEQGQEDSEAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + +V E+ +KP+VAA+ G ALGGGLE+A+GCH R+A ++GLP
Sbjct: 72 -------MQKPGLAELVETYENSEKPLVAAIHGTALGGGLEMALGCHYRVALNSAKIGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G KA+E++ + + +++ LG++D V E++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEIITSGEFVGAKDALALGILDVVDDGEDVKAAGL 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A IA KP R DK+ + + +V R +K A C+D IE
Sbjct: 185 AYAQQIADEGKPVRRVCDLKDKIAA-DKGSDVFDQFRAVLQKKARGQFSPFKCVDAIEAA 243
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G+ +E ++F E + G +H FFA+R SKV ++ R V V +I
Sbjct: 244 FDLPFAEGMKRERELFTECMDSPQRAGQIHSFFAEREVSKVKGLSK-DTPVRDVNSVGII 302
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA I V++ E+ E L KG+ I N +G+LTQ + + +
Sbjct: 303 GAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGLGIIRKNYENSAKKGRLTQQQVEDRIA 362
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
++ G L Y +FK VD+VIEAV E++ +K++IF++L+ C P ILA+NTST+D++ +
Sbjct: 363 LITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAKLDAICKPGTILASNTSTLDVDEIASA 422
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 423 TRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVLVGNCHGFVG 482
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR A LV+ G ++D + G P+G F
Sbjct: 483 NRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYPMGQF 520
>gi|410623226|ref|ZP_11334043.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410157148|dbj|GAC29417.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 707
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 295/528 (55%), Gaps = 16/528 (3%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V + +A++ L + PVNAL+ + G+ + E+A S D VKAIVL + FS G DI+
Sbjct: 14 VQDQHLALVGLNSAPVNALSKAVRVGIIESVEKALSDDKVKAIVLHSHLPLFSAGADISE 73
Query: 70 FQKVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F GD+S ++P+V + +IE KP++A V G A GGGLELA+ CH RI K
Sbjct: 74 FS----GGDLSPMLPEV-----LEVIEQSTKPVIAIVGGNAFGGGLELALSCHYRITHAK 124
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLL-SKSITSEEGWKLGLIDAVVTSE 187
++GLPE+ LG++PG GGTQRLPRL A++M++ + + + G LI V T++
Sbjct: 125 NKVGLPEVHLGILPGAGGTQRLPRLTDPKTALDMIVSGAPTPVTALGNVFDLI--VDTAD 182
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
EL + +A ++ + P R ++ S E + AK P C
Sbjct: 183 ELQSAAMSFANEVVEKLMPVKRVCDIDLEMSSDIETLFAQYSQGVAAKSKGFFAPGQ--C 240
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ ++ H +G+ +EA++F E + +R H FFA+RA S V ++ +K R
Sbjct: 241 VLAVKAAFTHDFKAGLAREAELFMECMTTSQARAQQHFFFAERAASHVQGISR-DVKARD 299
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+++ AVIG G MG GIA I V++ E+ L KG+ I N +GKLT +
Sbjct: 300 IKQAAVIGAGTMGGGIAMNFANAGIPVIMLELQQAALDKGLALIRRNYENSAKKGKLTSE 359
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ + +L G Y++ D D+VIEAV E + +K+++FS L+K C P ILA+NTST+D
Sbjct: 360 QVEQRMLLLTGTTSYADLSDADLVIEAVFEKMSVKKEVFSMLDKVCKPGAILASNTSTLD 419
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
LN + S +IG HFFSPA+VM LLEIVR E+TS +VI M + K I+KV V+VG
Sbjct: 420 LNEIAASISRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVIKTAMKLAKTIRKVGVLVG 479
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR PY + A L+ G ++D I FGLP+GPF G
Sbjct: 480 VCFGFVGNRMIEPYGREANRLMLEGATPEQVDRVIGKFGLPMGPFTMG 527
>gi|365091125|ref|ZP_09328632.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
gi|363416243|gb|EHL23363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
Length = 699
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 294/527 (55%), Gaps = 19/527 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ + A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLSTRQGIVEGLGRANADAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG+IPG GGTQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIGAVPGQKL-FDKMAASAESL 183
Query: 190 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ +A +A AR P +R+ E + AR K A N P C+
Sbjct: 184 AAEALAFAQSVADARPLPLVRNFPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDK 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ +L L Y + KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YEQRMALLSTTLSYDDLKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR YS+ A L+ G ++D AI FG +GPF+ G
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMG 524
>gi|449470586|ref|XP_004152997.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Cucumis sativus]
Length = 501
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 156/267 (58%), Positives = 203/267 (76%)
Query: 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198
+ PGFGGTQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WAL
Sbjct: 205 SLFPGFGGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWAL 264
Query: 199 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 258
DI+ RRKPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G
Sbjct: 265 DISERRKPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSG 324
Query: 259 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 318
+G+ KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGL
Sbjct: 325 PRAGLQKEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGL 384
Query: 319 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378
MGSGIATA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKG
Sbjct: 385 MGSGIATALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKG 444
Query: 379 VLDYSEFKDVDMVIEAVIESVPLKQKI 405
VLDY FKDVDMVIEAVIE++ LKQ+I
Sbjct: 445 VLDYESFKDVDMVIEAVIENISLKQQI 471
>gi|407695494|ref|YP_006820282.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
gi|407252832|gb|AFT69939.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
Length = 694
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 290/520 (55%), Gaps = 18/520 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I++ PPVNAL + GL+ E + D KA+V+ G G F G DI F K
Sbjct: 13 IGVISVNYPPVNALGQGVREGLQSCLREGLADDQAKALVVIGEGRTFPAGADIREFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV +N E +K ++AA+ G ALGGGLE+A+GC R+A ++GLP
Sbjct: 73 AG---PALPDV-----INEYESSEKLVIAAIHGTALGGGLEVALGCDYRVALDSAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRLVG A++M++ + ++ ++G++D VV+ + LL+ +
Sbjct: 125 EVKLGLLPGAGGTQRLPRLVGAKAALDMIVGGNPVKAKNALQMGIVDDVVSGD-LLEGAL 183
Query: 195 LWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A + A + P IR L + L + E +AR Q AP C+ ++
Sbjct: 184 AYARKLVADKAPLRRIRDLDVQTEEADLFASYE-KSIARKQRGFKAPFH-----CIKAVQ 237
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ +E ++F EL++ S HVFFA+R +KVP + K R V VA
Sbjct: 238 AAVELPFEEGMKRERELFGELLVSSESAAQRHVFFAEREVAKVPGLPKDTPK-REVNSVA 296
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I V + EV E L KGI I N +G+LTQ++
Sbjct: 297 VIGAGTMGGGIAMNFANAGIPVKILEVKEEALEKGIAIIRKNYENTAKKGRLTQEQVEQR 356
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +++ L Y + DVD+VIEAV E++ +K+ +F+EL++ C P ILATNTST+D+N +
Sbjct: 357 MALIQPTLSYDDLGDVDVVIEAVFENMSVKEAVFNELDRVCKPGAILATNTSTLDVNRIA 416
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +IG HFFSPA+VM LLE VR E+T+ VI +M + + I KV V+VG C GF
Sbjct: 417 SFTKRPQDVIGMHFFSPANVMKLLENVRGEKTADDVIATVMDLSRRIGKVGVLVGVCHGF 476
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR A LV+ G + ++D + G P+GPF
Sbjct: 477 VGNRMLHKRQAEAVQLVNEGANPAQVDKVLFDLGFPMGPF 516
>gi|348028986|ref|YP_004871672.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola nitratireducens FR1064]
gi|347946329|gb|AEP29679.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Glaciecola
nitratireducens FR1064]
Length = 704
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 292/523 (55%), Gaps = 16/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L PVNAL+ + G+ D ++A S D VKAIVL + FS G DI+ F
Sbjct: 16 LALVGLNGAPVNALSKALRIGIIDSVKKALSDDKVKAIVLYSHLPLFSAGADISEFS--- 72
Query: 75 GAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
GD+S ++P+V +++IE KP++A V G A GGGLELA+ CH RI K ++GL
Sbjct: 73 -GGDLSPMLPEV-----LDVIEQSTKPVIAIVGGNAFGGGLELALACHYRITHAKNKVGL 126
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKV 192
PE+ LG++PG GGTQRLPRL A++M ++S + T G+ D +V S +EL
Sbjct: 127 PEVHLGILPGAGGTQRLPRLTDPKTALDM-IVSGAPTPVTTLS-GVFDLIVDSADELQAA 184
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A D+ ++ P + + S EA + AK P H C+ ++
Sbjct: 185 AMAFATDVVEQQMPVKKVCDIELSMTSDIEALFEQYAQGVAAKTKGYFAPGH--CVLAVK 242
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
H G+ +E+++F E + +R H FFA+RA S V + + R +++VA
Sbjct: 243 AAFTHDFKDGLARESELFMECMKTSQARAQQHFFFAERAASHVQGIAK-DVVARDIKQVA 301
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I VV+ E+ + L KG+ I N +GKLT ++
Sbjct: 302 VIGAGTMGGGIAMNFANAGIPVVMLELKQDALDKGLALIRRNYENSAKKGKLTTEQVEQR 361
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L G Y + +VD+VIEAV E + +K+++F L+K C P ILA+NTST+DLN +
Sbjct: 362 MSLLTGTTSYEDLSNVDLVIEAVFEKMSVKKEVFGMLDKVCKPGAILASNTSTLDLNEIA 421
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S +IG HFFSPA+VM LLEIVR E+T+ VI M + K I+KV V+VG C GF
Sbjct: 422 ASVSRPQDVIGLHFFSPANVMKLLEIVRGEKTADDVIKTAMKLAKTIRKVGVLVGVCFGF 481
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR PY + A L+ G ++D I FGLP+GPF G
Sbjct: 482 VGNRMIEPYGREANRLMLEGATPEQVDKVIGKFGLPMGPFTMG 524
>gi|192292604|ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1]
gi|192286353|gb|ACF02734.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Rhodopseudomonas
palustris TIE-1]
Length = 699
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 290/530 (54%), Gaps = 11/530 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F G + P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEF------GKPAQPP--ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ +LGLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GL++ +V
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEIV- 174
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RAVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D + ++ GV+ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGVVGLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSY 412
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF G
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|398812024|ref|ZP_10570805.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398079241|gb|EJL70108.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 711
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 288/528 (54%), Gaps = 12/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ NPPVNAL + + GL + A + +A+++ G G F G
Sbjct: 15 VTFERRGD-VFVVTIDNPPVNALGVDVRRGLVAAIDAAEADSAARAVLIVGAGRNFIAGA 73
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +P+ ++ IE+C KP+VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 DIREFGKTP---QPPSLPEACLK-----IENCTKPVVAAIHGAALGGGLEVALSAHYRIA 125
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+P +LGLPE+ LG++PG GGTQR PRL+G A+E+ML + ++E LGL+D +
Sbjct: 126 SPTAKLGLPEVALGLLPGSGGTQRAPRLIGAKPALELMLSGRHADAKEALSLGLVDRLGN 185
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ L +A ++ A + P +R L +R L+ AR K + +
Sbjct: 186 DADALAEGLAYAQELVAAKAP-VRRTREAAGLVDTEASRAALEAARADTAKKSRGLFSPM 244
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
++ +E + G+ E K+F + + GL+H FFA+R K P KP
Sbjct: 245 KIIEAVEGALTLPFDEGMALERKLFLQCIDSPQRAGLIHAFFAEREVLKAPETK--AAKP 302
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + ++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T
Sbjct: 303 RALESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIAKGRMT 362
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + G Y +VD+V+EAV E + +K+ +F+EL++ C +LATNTS
Sbjct: 363 PESKAAVMARFNGSTSYDALANVDIVVEAVFEEMGVKKAVFAELDRVCKRGAVLATNTSY 422
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + + S ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV
Sbjct: 423 LDIDEIADSISRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVR 482
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A ++ G + ID+A+R+FG P+GPFQ
Sbjct: 483 AGVCDGFIGNRILAVYRQAADHMMEDGASPYEIDAAVRNFGYPMGPFQ 530
>gi|381393975|ref|ZP_09919693.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379330247|dbj|GAB54826.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 682
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 293/518 (56%), Gaps = 19/518 (3%)
Query: 20 LINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79
+ N PVNAL+ I GL D A + D+V+AIV+T FS G DI+ F +GD+
Sbjct: 1 MANKPVNALSKAIRTGLIDAMNMALANDNVEAIVITSELALFSAGADISEFS----SGDL 56
Query: 80 S-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138
+ ++PDV + L+E+ KP+VAAV G A GGGLELA+ CH R++ ++GLPE+ L
Sbjct: 57 APILPDV-----LTLVENSSKPVVAAVNGGAFGGGLELALACHYRLSTNHNKVGLPEVHL 111
Query: 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198
G++PG GGTQRLPRL+ KA++M++ + + +L + ++V ELL + A+
Sbjct: 112 GILPGAGGTQRLPRLIAPEKALQMIVTGAPTSVKAISELFV--SIVEPSELL----VQAI 165
Query: 199 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 258
+A + + KL S E + + ++Q A C++ ++
Sbjct: 166 KVAKQAVGKVIPATSLIKLSSSPEIEALCEQTKVQTSAKARGFFAPAKCIEAVKAAFELP 225
Query: 259 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGG 317
G+ +E ++F+E + +R H FFA+R +P + D L R +++VA+IG G
Sbjct: 226 FAQGLKREGELFEECMHTPQARAQQHFFFAERVAGALPQIAKDTAL--RDIKQVAIIGAG 283
Query: 318 LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 377
MG GIA I VVL E+ L KG++ I N +GKLTQ++ +++L
Sbjct: 284 TMGGGIAMNFANVGIPVVLLELEQAALDKGLELIRRNYENSAKKGKLTQEQVEQRMELLT 343
Query: 378 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 437
G Y + +VD+VIEAV E + +K+++F L+K C P ILA+NTST+DL+ + + TS
Sbjct: 344 GTTSYDDLSEVDLVIEAVFEKMSVKKQVFEALDKVCKPGAILASNTSTLDLDEIAQCTSR 403
Query: 438 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497
+ +IG HFFSPA+VM LLEIV+ +T+ VI M + K IKKV V+VG C GF NR
Sbjct: 404 EQDVIGLHFFSPANVMKLLEIVQGAKTADDVIKTAMHLAKTIKKVGVLVGVCFGFVGNRM 463
Query: 498 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
Y + A L+ G +ID I FGLP+GPF G
Sbjct: 464 IEVYGREAGRLMLEGATPQQIDKVIYDFGLPMGPFTMG 501
>gi|393776806|ref|ZP_10365100.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392716163|gb|EIZ03743.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 698
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 292/529 (55%), Gaps = 12/529 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ +E +A+I + +PPVN+L L + + A + +V AIVL G G FS G
Sbjct: 6 LKLEGSRASIAVIRIDSPPVNSLGHATRTALAESIQAAHAAKEVDAIVLIGAGKLFSAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F + +V PD+S EL+ LIE KP+VAA+ G+A+GGGLELA+GCHAR+A
Sbjct: 66 DIREFDRP----EVWKSPDLS-ELIA-LIERGPKPVVAAIHGMAMGGGLELALGCHARVA 119
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
L LPE+ LG++PG GGTQRLPRL GL++A++M++ + T+ E L+D V+
Sbjct: 120 THNALLALPEVKLGLLPGAGGTQRLPRLAGLTRALDMIVSGEPQTAAELQGTPLLDQVIE 179
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
E +L + A+ +A + + + + A L AR Q + P P +
Sbjct: 180 HEHVLLPA---AVALAEQMGEHGERPMASARTVTAENADLQLAAAREQVARRTPREPAKR 236
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 304
C+D +E ++ + + +E F EL SR L H+FFA+R + + ++ D ++
Sbjct: 237 RCIDAVEASLLLPFEAALERELAYFHELSASPESRALRHLFFAERTAASISDIPKDTPVR 296
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P + AV+G G MG+GIA + I V L E + L +G+ +I + +G++
Sbjct: 297 P--IHSAAVVGAGTMGAGIAQCLLDAGIPVKLLEASRAALDRGVASITRQYQRARDKGRI 354
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ LK+L VLDY+ DVD+VIEAV E +K K+F L+ P ILATNTS
Sbjct: 355 DDARMAARLKLLTPVLDYAALGDVDIVIEAVFEQFDVKSKVFQSLDAVMKPGAILATNTS 414
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D+N + T +IG HFFSPAHVM LLE+VR E+T A V++ +M + K + K V
Sbjct: 415 MLDINRLAATTGRAGDVIGTHFFSPAHVMRLLEVVRGEQTRADVLVTVMRLAKKLGKTAV 474
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V C GF NR Y + A L+ G ++D A+ FGL +GPF+
Sbjct: 475 VARVCDGFIGNRMIEQYLRQAGFLLEEGATPAQVDRAVEQFGLAMGPFR 523
>gi|387814500|ref|YP_005429986.1| bifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339516|emb|CCG95563.1| bifunctional enzyme (PBE) (PBFE) [Includes: Enoyl-CoA hydratase ;
3,2-trans-enoyl-CoA isomerase ; 3-hydroxyacyl-CoA
dehydrogenase ] [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 699
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/527 (37%), Positives = 294/527 (55%), Gaps = 21/527 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + +IT+ NPPVNAL+ + +G+ + +A + DD +AI++ G F G DI+ F K
Sbjct: 9 DELGVITISNPPVNALSHGVRSGILEAVNQAQA-DDSRAILILCEGRTFVAGADISEFGK 67
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + S+ V IE KP++AA+ G ALGGG EL + CH R A P +G
Sbjct: 68 P--------IQEPSLPKVNAAIEASNKPVIAAIHGTALGGGFELTLSCHYRCALPSAFVG 119
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 189
LPE+TLG++PG GGTQR+PRL+G+ A+++M + + +E+ +LGLID V+ E
Sbjct: 120 LPEVTLGLLPGAGGTQRVPRLIGIKAALDLMTSGEKVPAEQARELGLIDRVLEGDLREGA 179
Query: 190 LKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L +R A + RR IR + G ++ L R Q K Q +
Sbjct: 180 LNYARDCLAGGLGVRR---IRDMQIPVDSGD----QQTLDAYRNQLAKRKRGQEAPQRIV 232
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D +E + G+ E F E D S L H+FFA+R KVP++ D R +
Sbjct: 233 DCVEIALNRPFDEGLAFERSQFVECTQSDQSAALRHLFFAERKALKVPDL-DPEAHARDI 291
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+V +IG G MG GIA A I V+L E+N E L +G+ I N V+RGKL+ +
Sbjct: 292 SRVGIIGAGTMGGGIAMAFANAGIPVMLLELNQEGLDRGLTLISENYGRSVSRGKLSTSE 351
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A + ++ G ++Y + VD+VIEAV ES+ +K+++F L++ C P ILATNTS +D+
Sbjct: 352 AASRKALITGSINYEDLAKVDLVIEAVFESMDVKKQVFQRLDEVCRPGTILATNTSYLDV 411
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + TS ++G HFFSPA++M LLE+VR E+T+ VI M +GK ++KVPV+
Sbjct: 412 NEIASATSRPGDVVGLHFFSPANIMKLLEVVRAEQTADDVIATAMALGKRLRKVPVLSRV 471
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y++ A+L + G +ID A+ FG+ +GP G
Sbjct: 472 CYGFIGNRMLRQYAKEAQLCMIEGATPEQIDGALTDFGMAMGPLAVG 518
>gi|158424497|ref|YP_001525789.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
gi|158331386|dbj|BAF88871.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
Length = 691
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 211/529 (39%), Positives = 289/529 (54%), Gaps = 17/529 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V E+ GVA +T+ NPPVNAL + AGL A + DV+AIV+ G F G
Sbjct: 4 VRTEISAAGVATLTIANPPVNALGAAVRAGLLSGLTAALANADVRAIVIAAEGKVFVAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI+ F K P V L V++ +E KP+VAA+ GLALGGGLELA+ CHAR
Sbjct: 64 DISEFGK----------PPVPPSLPDVLSAVEGSAKPVVAAINGLALGGGLELALACHAR 113
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+AAP +LGLPE+ LG+IPG GGTQRLPRLVG + A MM + +++E+ +GL+D +
Sbjct: 114 VAAPAARLGLPEIKLGIIPGAGGTQRLPRLVGAAPAFAMMAGGEPVSAEKARAMGLVDDI 173
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ L+ + AL +A W RS K + E R + A A + +P MP
Sbjct: 174 ADGD-LVATAATQALRLA-EAGTWPRSGAAESKFSA--EDRAAFETAASDAIRKSPRMPN 229
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
A + G+ G G+ E F ELV TS+ L H+FFA+R ++VP + +
Sbjct: 230 VAALAHAVRVGLEKGLAEGLAAERAAFLELVKDPTSKALRHLFFAEREAARVPGIGK-EV 288
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
K R V AVIG G MG GIA I V L EV E L G+ I +N V RG
Sbjct: 289 KARPVASAAVIGAGTMGGGIAMCFAQAGIPVTLIEVKEEALSAGLARIRSNYETSVKRGS 348
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LT +K L + G + + D+V+EA E + +K +IF L++ P ILATNT
Sbjct: 349 LTSEKMERHLGFITGRVGLEAAAEADIVVEAAFEDMGVKAEIFGALDRLAKPGAILATNT 408
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + E T ++G HFFSPA+VM LLEIVR +T+ V++ + + + I K+P
Sbjct: 409 SYLDVNAIAETTKRPQDVVGLHFFSPANVMRLLEIVRGAKTAPDVLVTSLDLARKIGKLP 468
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVVG C GF NR +Q+A L+ G +D A+ FG +GPF
Sbjct: 469 VVVGVCYGFVGNRMLAKRTQAAERLLLAGAMPHEVDDAVTDFGFRMGPF 517
>gi|86748869|ref|YP_485365.1| enoyl-CoA hydratase [Rhodopseudomonas palustris HaA2]
gi|86571897|gb|ABD06454.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris HaA2]
Length = 699
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 288/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+AI+T+ +PPVNAL+ + G+ + A + +V+AIVLT G F G DI F
Sbjct: 10 HDGIAIVTVDSPPVNALSAAVRRGILENVNAAVADPEVQAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A + +L
Sbjct: 70 K-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGNPIGAAEALKHGLISEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A + A + P R KL + R + A K A + AC D I
Sbjct: 180 GGEAFARKVLAEKLPARRLRDDDSKLAAARADRSIFTNAVAAMTKKARGLEAPFACADAI 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KPR V +V
Sbjct: 240 GAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKPRPVSRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETGKEQLDRGMGIMQKNYEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ G++ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 359 RMGLITGMVGLDNVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNVDDI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVVVG C G
Sbjct: 419 AATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR S+ + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAARSKQSEKLLFEGAPPQQVDAVVTKFGMPMGPFAMG 522
>gi|163793451|ref|ZP_02187426.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
gi|159181253|gb|EDP65768.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
Length = 702
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/525 (36%), Positives = 294/525 (56%), Gaps = 17/525 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I ++NPPVNAL+ + AGL F++ + + K +V+ G+G F G DI F K
Sbjct: 13 IGLIQVVNPPVNALSQAVRAGLSAAFQQGANDPEAKVLVIYGDGRTFIAGADIREFGK-- 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
P ++ V+ IE C KP VAA+ G ALGGGLE+A+GC R+A P ++GLP
Sbjct: 71 -----PPQPP-ALGTVIGEIETCSKPTVAAIHGTALGGGLEVALGCLFRVAIPGAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG GGTQRLPR+ G++ A+EM+ + + EE LG++DA++ ++++
Sbjct: 125 EVKLGIIPGAGGTQRLPRVAGVTAALEMITSGRHVPVEEAADLGIVDAIIDTKDVKAAGI 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAR---EVLKLARLQAKKTAPNMPQHQACLDVI 251
+A + A + +L D+ G L+EAR V AR + +K+A + C+D +
Sbjct: 185 AFAQRVIAE---GLTALPVRDRDGKLAEARADRSVFADARKKLEKSARGLFSPFRCVDAV 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRK 310
E + G+ +E ++F++ + +HVFF +R +KVP ++ DI +P V K
Sbjct: 242 EAAVDLPIDDGLKRERELFQQCMESPQRAAQIHVFFGEREVAKVPGMSKDITARP--VNK 299
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
AVIG G MG GIA I V + E + L +G+ + +N RG++T D
Sbjct: 300 AAVIGAGTMGGGIAMCFANAGIPVTVVETAQDALDRGLNRVRSNYDISAKRGRMTPDDVE 359
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ LD ++ D D++IEAV ES+ +K+++F++L+K P +LATNTS +D++
Sbjct: 360 ARMALITPSLDLADLHDADLIIEAVFESLDVKKEVFAKLDKIAKPGAVLATNTSYLDVDA 419
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS ++G HFFSPA+VM LLE+VR +T + + VG+ KV VV G C
Sbjct: 420 IAAMTSRPADVLGMHFFSPANVMRLLEVVRGAKTDDDALRTALEVGRKFGKVAVVSGVCD 479
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR Y L+ G ID+AI FG P+G + G
Sbjct: 480 GFIGNRMLRTYKTQMDYLLEDGALPQEIDAAITGFGFPMGLYAMG 524
>gi|294146813|ref|YP_003559479.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677230|dbj|BAI98747.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 687
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 288/520 (55%), Gaps = 11/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ +PPVNAL + + L A + +++A++L G FS G DI+ F K
Sbjct: 13 IAVLTIDSPPVNALGLDVRRALLKYISMAEADPEIEAVILACAGQTFSAGADISEFGKPF 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A PD+ V V IE+ K IVAA+ G ALGGGLE+A+ CH RIA P +LGLP
Sbjct: 73 QA------PDLGV--VCRHIENSSKIIVAAIHGTALGGGLEVALCCHYRIAVPSARLGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR+PRL+G KA+E + +++ ++G++D V L+ +
Sbjct: 125 EVALGLLPGAGGTQRIPRLIGARKALEFITGGAPVSASAAREMGIVDEVADEGALVGSAL 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ + A P R D++ + + E+ R + ++ + IE
Sbjct: 185 EYVRKLIAGGAPLRRVRDLEDRIAADRQQPELFDEFRRSNARAFRGKDAPESIVKAIEAA 244
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAV 313
+ G+ +E ++F EL ++ +H FFA+R SKV +V D + P VR V V
Sbjct: 245 VALPFEEGLAREFELFVELEKGLQAKAQIHAFFAERTASKVKDVPGDTPVLP--VRTVGV 302
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+G G MG GIA + I V + E L +GI TI N + RGKLT + +
Sbjct: 303 VGAGTMGGGIAMNFLNVGIPVHIVETAQANLDRGIATIRKNYEISLKRGKLTAEALERRM 362
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L LD + +D D++IEAV ES+PLKQ+IF++L+ ILA+NTS +DLN +
Sbjct: 363 SLLHATLDLGDLRDCDLIIEAVFESMPLKQEIFAKLDAVARDGAILASNTSFLDLNQIAR 422
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS D +IG HFFSPA+VMPLLE+VR + T+ V+ M + + I KVPV+ G C GF
Sbjct: 423 ATSRPDHVIGLHFFSPANVMPLLEVVRGDATAKPVVATAMKLARKIGKVPVLSGVCDGFI 482
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NRA ++ A LL+ + ID+AI +G +GPF+
Sbjct: 483 ANRAMRARTEQADLLLLQNLSPDAIDAAIYDYGFAMGPFR 522
>gi|91978018|ref|YP_570677.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB5]
gi|91684474|gb|ABE40776.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB5]
Length = 699
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 290/524 (55%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++T+ +PPVNAL+ + G+ D A + +V+AIVLT G F G DI F
Sbjct: 10 HDVIAVVTVDSPPVNALSAAVRRGILDNVNAAVADPEVQAIVLTCAGRTFIAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + P S+ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A +L
Sbjct: 69 -----GKPAQPP--SLNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKDARL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + + K GLI+ VV E+ +
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGNPIGAADALKHGLIEEVV--EDRVA 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A + A ++P R KL + R + A K A + AC D I
Sbjct: 180 GGVAFARKVLAEKRPTRRLRDDDSKLAAARADRSIFTNAVASMTKKARGLEAPFACADAI 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KPR V +V
Sbjct: 240 GAAIDLPFEQGLAKEREGFLKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GAKPRPVARV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETGKEQLDRGMGIMQKNYEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 359 RMGLITGVVGLENVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNVDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV G C G
Sbjct: 419 AATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVAGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR S+ + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FIGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|319791569|ref|YP_004153209.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315594032|gb|ADU35098.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 711
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 285/528 (53%), Gaps = 12/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ NPPVNAL + + GL A + +A+++ G G F G
Sbjct: 15 VTFERLGD-VFVVTIDNPPVNALGVDVRRGLVAAIAAAEADSAARAVLIVGAGRNFIAGA 73
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A +P+ + IE+C KP+VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 DIREFGKPPQAPS---LPEACLA-----IENCTKPVVAAIHGAALGGGLEVALSAHYRIA 125
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+P +LGLPE+ LG++PG GGTQR PRL+G+ A+E+ML + ++E LGL+D + T
Sbjct: 126 SPTAKLGLPEVALGLLPGSGGTQRAPRLIGVKPALELMLSGRHAGAKEALSLGLVDRLGT 185
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ +A ++ A + P +R L +R L+ AR K + +
Sbjct: 186 EADARAEGLAYAEELVAAKAP-VRRTREAAGLADKEASRAALEAARTDTAKKSRGLFSPM 244
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
++ +E + G+ E K+F + + GL+H FFA+R K P P
Sbjct: 245 KIVEAVEGALTLPFDEGMALERKLFMQCIDSPQRAGLIHAFFAEREVLKAPETKSA--NP 302
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + ++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T
Sbjct: 303 RKLESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIAKGRMT 362
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + G Y +VD+V+EAV E + +K+ +F+EL++ C P +LATNTS
Sbjct: 363 PEAKAAVMARFSGSTSYDALANVDIVVEAVFEEMGVKKAVFAELDRVCKPGAVLATNTSY 422
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV
Sbjct: 423 LDIDEIAASIKRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVR 482
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A ++ G ++ID A+R FG P+GPFQ
Sbjct: 483 AGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEAVREFGYPMGPFQ 530
>gi|332525955|ref|ZP_08402096.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
gi|332109506|gb|EGJ10429.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
Length = 702
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 289/532 (54%), Gaps = 27/532 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN L + L E A + V AIV+TG G FSGG DI F
Sbjct: 11 VAVLTLDNPPVNGLGLATRRELSAGLERALADPAVVAIVVTGAGKVFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ ++ +E KP+VAA+ G +GGGLEL++ CH R+AAP TQ+ LP
Sbjct: 67 --GTDRAIAEPNLHSLIRQVELAGKPVVAAMHGTCMGGGLELSLACHYRVAAPATQVALP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 189
E+ LG++PG GGTQRLPR++ + A+ M++ + + SE G KL A + EL
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLDVETALNMIVSGEPVASELLASLPGQKLF---AQIVEGEL 181
Query: 190 LKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
L + +A P +R L + + AR K A + P
Sbjct: 182 LAGAVAFAAAKGHEHAGGAPLPRVRDLK-----ARHANPDAFFQFARNTVKAMARHFPAP 236
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 303
C+D +E + +G+ E ++F L+ S+ L H FFA+RA SK+P+V D L
Sbjct: 237 AKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAFFAERAASKIPDVPEDTPL 296
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + KV V+G G MG GI+ + + V + E +E L +G+ TI N V +GK
Sbjct: 297 --RRITKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALERGVATIRRNYEAQVKKGK 354
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
L +DK + +L L Y++ D+VIEAV E + +KQ++F L++ P ILA+NT
Sbjct: 355 LKEDKYQQRMALLTTTLSYADLAGCDLVIEAVYEDLGVKQQVFGALDEVVKPGAILASNT 414
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
ST+D+N + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K
Sbjct: 415 STLDVNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQLAKTIRKTA 474
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VV G C GF NR YS+ A L+ G ++D A+ +FG +GPF+ G
Sbjct: 475 VVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAFGFAMGPFRMG 526
>gi|295677036|ref|YP_003605560.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436879|gb|ADG16049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 706
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 282/521 (54%), Gaps = 15/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALCADVRRGLLGAIEAADADRAVEAVLIIGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP++AA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACAKPVIAALHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G A++++L + +++E LGLID + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAPAALDLILSGRHASAKEALALGLIDRLGASGDILAE 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A ++ A P +R L + + + AR + K A + +D +E
Sbjct: 188 GLAYAHELLAAHAP-VRRTRDAAALNDRAASLAAVAKARDETAKKARGLFSPLKIVDAVE 246
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
I G+ E K+F + + GLVH FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLKFERKLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRQLEAIG 304
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG+GIA A + + V + E + L +G I+ GL+ +G+LT DK
Sbjct: 305 VIGGGTMGAGIAIAVLDAGLPVTMIERDEASLARGRAHIDKVYDGLIAKGRLTADKKAAT 364
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ G Y D+VIEAV E + +K+ +F+EL++ C P +LATNTS +D+ +
Sbjct: 365 MARWSGSTSYDALAHADLVIEAVFEDLDVKKAVFAELDRVCKPGAVLATNTSYLDIEAIA 424
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C GF
Sbjct: 425 ASISRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVCDGF 484
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A L+ G ++ID+A+R+FGLP+GPFQ
Sbjct: 485 IGNRLLAVYRAAADALMEDGASPYQIDAAVRAFGLPMGPFQ 525
>gi|312115608|ref|YP_004013204.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311220737|gb|ADP72105.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodomicrobium
vannielii ATCC 17100]
Length = 695
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 295/537 (54%), Gaps = 23/537 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA VT E DGV +IT+ NPP+N ++ + GL +A + KA+VL G G
Sbjct: 1 MARSPVTYET-KDGVGVITVDNPPLNVVSNEVRDGLMLAIRKAEADPVAKAVVLIGAGRN 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F+ G DI + D++ D+ L ED KP+VAA+ G + GLE+A+ C
Sbjct: 60 FAAGADIYELTHPYSGADIN---DICAAL-----EDLPKPVVAALHGTPVARGLEVALAC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H RIAA +LGLPE+ +G++PG GGTQRLPRLVG A+++++ + + + +GL+
Sbjct: 112 HYRIAAKDARLGLPEVKVGLLPGGGGTQRLPRLVGAKAALDIIISGDLVPAVKAKTIGLV 171
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT---DKLGSLSEAREVLKLARLQAKKT 237
D VV + L L + P R L D+ L E R R + ++
Sbjct: 172 DEVVDGDILPAAIALAKSKSFLSKHPKTRELSAKIAPDRGSHLFEGR------RDELRRR 225
Query: 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
P C+D IE VH +S G+ +E ++F E + D S+ L+H FFA+R +K+P
Sbjct: 226 QPFQHAQFRCVDAIESA-VHLPFSQGLKRERELFNEALDDDQSKALIHAFFAEREAAKIP 284
Query: 297 NV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
TD+ +PR ++ VAV+G G MG GIA A V++ + + L +G+ + N
Sbjct: 285 GFRTDV--RPREIKSVAVVGSGHMGGGIAMAFANAGFPVIVLDRDQAALSRGLAVVAKNY 342
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
+V RG+L Q N L ++ ++Y + DVD+V+EA E + +K+++F +L++AC
Sbjct: 343 ESMVRRGRLDQPGMNKRLSAIRSTVNYKDLADVDLVVEAAFEDIGVKEQVFRDLDRACKK 402
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I A+NTST+D++ + T +IG HFFSPA+V L+E+VR + TSA V+ M V
Sbjct: 403 GAIFASNTSTLDIDEIASFTRRPGDVIGTHFFSPANVQRLVEVVRGKETSADVLATAMAV 462
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K I K+ V VGNC GFA NR Y A +++ G +D+A+ +GL +GPF
Sbjct: 463 AKKIGKIGVAVGNCDGFAGNRMLEKYVTEAMIILEEGATPAEVDTALTRWGLAMGPF 519
>gi|172061837|ref|YP_001809489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171994354|gb|ACB65273.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 711
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 279/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQTDDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCEQIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 129
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + +++E LGL+D + S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLVDRLAHSDDT 189
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R L + A+ + AR K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAP-ARRTREARGLADRASAQAAIDAARADLPKKSRGLFSPAKIVD 248
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 249 AVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 306
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDID 426
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ ++G HFFSPA+VM LLEIV R SA+V+ + K +KK PV G C
Sbjct: 427 ELAATIDRPADVVGLHFFSPANVMKLLEIVVPARVSAEVVATAFALAKQLKKTPVRAGVC 486
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 530
>gi|316933001|ref|YP_004107983.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
[Rhodopseudomonas palustris DX-1]
gi|315600715|gb|ADU43250.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Rhodopseudomonas palustris DX-1]
Length = 699
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 289/530 (54%), Gaps = 11/530 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEFGK-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ +LGLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GL++ +V
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEIV- 174
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVVAEKRPTRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D + ++ GV+ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGVVGLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSY 412
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDDIAAVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF G
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|374333398|ref|YP_005083582.1| fatty oxidation complex subunit alpha [Pseudovibrio sp. FO-BEG1]
gi|359346186|gb|AEV39560.1| fatty oxidation complex, alpha subunit [Pseudovibrio sp. FO-BEG1]
Length = 717
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/529 (36%), Positives = 290/529 (54%), Gaps = 16/529 (3%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+V+ E+ D VA++T+ N PVNAL++ I L + ++ + KA V+ G F G
Sbjct: 10 QVSYELRGD-VAVMTVSNAPVNALSLAIRQDLVARIKQFEEDEAAKAAVIVGEDKVFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F++ +PDV ++ IE C KP++AA+ G+ALGGGLE+A+GCH R+
Sbjct: 69 ADIREFKR---PATEPHLPDV-----IDSIEACSKPVIAAIHGVALGGGLEVALGCHFRV 120
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
++GLPE+ LG+IPG GGTQRLPRL G KA+EM+ I ++ G++D V
Sbjct: 121 GVKGAKVGLPEVHLGIIPGAGGTQRLPRLAGYEKALEMIPSGAPIGADAAKSAGILDGVS 180
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ + +A + P L R +L + + +V A+ K A
Sbjct: 181 DEADAVAAGLAFARSVIDNGTP----LRRCSELVAPAVDAQVFVDAKAAVAKRARGQKSP 236
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C++ IE G+ KE ++F EL R L H FFA RA K+P + G+
Sbjct: 237 VVCVEAIEVASQTSFVDGMAKEREMFMELKNSAQHRALSHAFFADRALGKLPEIE--GIA 294
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++ + VIGGG MG+GIAT ++N + V L E + + L + TI NV G V +GKL
Sbjct: 295 PRMLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDDALGRAKATIAKNVGGAVKKGKL 354
Query: 365 TQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ D+ + L DY+ ++D+V+EAV E + +K+++F +L++ C +LATNT
Sbjct: 355 SADQEQRIFAEALSLSTDYASLSELDLVVEAVFEDIDVKKQVFEKLDEVCKEGAVLATNT 414
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + T +IG HFFSPAH+M LLE+V ++T+ VI +GKI++KV
Sbjct: 415 SYLDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFLLGKIMRKVA 474
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V G C GF NR Y +A +V G F +D + FG P+GP+
Sbjct: 475 VRAGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDEVMLEFGFPMGPY 523
>gi|118590370|ref|ZP_01547772.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
gi|118436833|gb|EAV43472.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
Length = 704
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 289/538 (53%), Gaps = 38/538 (7%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V++E+ N V +I L NPPVNA + I +GL + D V+ I L G F G
Sbjct: 16 VSIEI-NGSVGLIALDNPPVNAASHAIRSGLWQAVDTLQQTDGVEVIALYAKGRTFIAGA 74
Query: 66 DINVFQKVHGAGDVSLMP--DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P D + + N IE +PIV + G LGGGLE+AM CHAR
Sbjct: 75 DIREFGK----------PPLDPWLPELCNFIESASRPIVCVLHGTTLGGGLEVAMSCHAR 124
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+A +++GLPE+TLG++PG GGTQR PRL G++ A++M+ K + ++E GLID +
Sbjct: 125 VALKGSKVGLPEVTLGILPGAGGTQRAPRLAGIATALDMITSGKPMAADEALSHGLIDRI 184
Query: 184 VTSE----ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKT 237
V + L L A D+ R K G L+ + +K R + K+
Sbjct: 185 VEGDPRDIALSSAKDLLAGDLPNR------------KTGELTAEPDPAAIKAMRTKLAKS 232
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR-GLVHVFFAQRATSKVP 296
P + C+D +E H +KE + E M R GL+H FF++RA +K+P
Sbjct: 233 QPLLFSPHKCVDAVE--ACHLPIREGMKEERRLYEECMASPQRAGLIHAFFSERAVTKIP 290
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
T R + V VIGGG MGSGIATA +L + V L E + + L +G+ TI N+
Sbjct: 291 EATATA---REINSVGVIGGGTMGSGIATAILLVGLPVTLTERDQDGLDRGVATITRNLE 347
Query: 357 GLVTRGKLTQDKANNALKM-LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V RGKL+ + ++ L L D + + D+VIEAV E + +K++IF L+K C P
Sbjct: 348 GAVKRGKLSAEARDDILAAKLTTSTDLAALAEADLVIEAVFEDMGVKREIFQTLDKVCKP 407
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
+LA+NTS +D+N + TS +IG HFFSPAHVM LLE+V ++T A V+ +
Sbjct: 408 GTVLASNTSYLDINEIAATTSRPQDVIGLHFFSPAHVMRLLEVVVADKTGADVVATGFAL 467
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ +KK+ V G C GF NR Y ++A ++ G ID+A+R FG +GP+Q
Sbjct: 468 ARKLKKIAVRSGVCDGFIGNRIMTFYKKTADYMMMDGASPEEIDTAMRGFGFAMGPYQ 525
>gi|78067690|ref|YP_370459.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77968435|gb|ABB09815.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 710
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 283/522 (54%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDVAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++P S+ V IE KP+V A+ G LGGGLE+A+ H R+A P +L
Sbjct: 79 K-------PIVPP-SLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGAKL 130
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GGTQR PRL+G A+++ML + ++++E LGL+D V S++ L
Sbjct: 131 GLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHVSADEALALGLVDRVAHSDDTLA 190
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A ++ + P +R L + A+ + AR + K + + +D +
Sbjct: 191 EGLAYAQELVSLGAP-VRRTRDAQGLVDRAAAQAAIDAARAELPKKSRGLFSPAKIVDAV 249
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E + +G+ E +F + + GLVH FFA+R +K P +P V ++
Sbjct: 250 EAALTQSFDAGMAFERSLFLQCIDSPQRAGLVHAFFAEREAAKAPESRRASARP--VERI 307
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA + + + V + E + L +G +E GLV +G++T
Sbjct: 308 GVVGGGTMGAGIAVSALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAHAA 367
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++ +
Sbjct: 368 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDIDEL 427
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C G
Sbjct: 428 AASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVCDG 487
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 488 FIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|39936778|ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
gi|39650635|emb|CAE29158.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
Length = 699
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 289/530 (54%), Gaps = 11/530 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEFGK-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ +LGLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GL++ VV
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEVV- 174
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D + ++ G++ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGLVGLENVKDADLIIEAVFETMAVKKEVFTAVDAHAKPGAVLASNTSY 412
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF G
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|126665779|ref|ZP_01736760.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
gi|126629713|gb|EBA00330.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
Length = 697
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 281/518 (54%), Gaps = 10/518 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ + K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLIAALEQGQEDSEAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + +V E+ KP+VAA+ G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 72 -------MQKPGLPELVETYENSDKPLVAAIHGTALGGGLEMALGCHYRIALNSAKIGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G KA+E++ + + +++ LG++D V +++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEIITSGEFVGAKDALALGILDVVDDGKDVKAAGL 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A IA KP R DK+ + + +V R +K A C+D IE
Sbjct: 185 AYAQQIADEGKPVRRVRDLKDKIAA-DKGSDVFDQFRAVLQKKARGQFSPFKCVDAIEAA 243
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G+ +E ++F E + G +H FFA+R SKV ++ R V V +I
Sbjct: 244 FDLPFAEGMKRERELFTECMDSPQRAGQIHSFFAEREVSKVKGLSK-DTPVRDVNSVGII 302
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA I V++ E+ E L KG+ I N +G+LTQ + +
Sbjct: 303 GAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGLGIIRKNYENSAKKGRLTQQQVEDRTA 362
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
++ G L Y +FK VD+VIEAV E++ +K++IF++L+ C P ILA+NTST+D++ +
Sbjct: 363 LITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAKLDGICKPGTILASNTSTLDIDEIASA 422
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 423 TRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVLVGNCHGFVG 482
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR A LV+ G ++D + G P+G F
Sbjct: 483 NRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYPMGQF 520
>gi|119474779|ref|ZP_01615132.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119450982|gb|EAW32215.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 694
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 290/523 (55%), Gaps = 14/523 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVAI+T+ NPPVNAL+ + AGL D +A + D+V AIVL G F G DI F
Sbjct: 14 DGVAILTVDNPPVNALSSGVRAGLSDGVAQAAADDNVTAIVLICAGRTFIAGADITEF-- 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + P S+ + +E+C KPIVAA+ G LGGGLE A+ CH R++ K + G
Sbjct: 72 ----GGKATGP--SLHEALEAMENCSKPIVAAIHGTVLGGGLETALVCHYRVSDAKARFG 125
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR+VG+ KA++M+ I ++E GLI +VT +L
Sbjct: 126 LPEVKLGLLPGAGGTQRLPRVVGVEKALQMVTSGDQIGADEALASGLISEIVT--DLRGD 183
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A + A KP +R + ++ + E+ R + + + + IE
Sbjct: 184 AIAFAKKVVAEGKPLVRIRDQNAEIDAAKAKPELFSNIRKAIARKSRGFKAPEYNIRCIE 243
Query: 253 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + LK EA +F+EL+ S H FFA+R +K+P+V + + V
Sbjct: 244 AAVNSDNFDDGLKVEADLFRELMTGGQSAAQRHFFFAERQAAKIPDVPKETPEIE-INSV 302
Query: 312 AVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VIG G MG GI + +ILN V + E E L +GI + N +G+++Q
Sbjct: 303 GVIGAGTMGGGI-SMNILNIGTPVTIVETTQEALDRGIAIVRKNYENTAKKGRISQQDVE 361
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + +L G L+ + D D+VIEAV E++ +K++IF++L+K ILA+NTS +D+N
Sbjct: 362 DRMALLTGSLNIEDLADCDLVIEAVFENMKVKKEIFAKLDKIVKQGAILASNTSALDVNE 421
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T + +IG HFFSPA+VM LLE+VR +++S VI M K I KV +VG C
Sbjct: 422 IASATVRPESVIGLHFFSPANVMKLLEVVRGDKSSHPVIKTSMAFAKRIGKVAALVGVCP 481
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR P Q A+ L+ G ++D + FG P+GPFQ
Sbjct: 482 GFVGNRILAPRQQQAQQLILEGALPHQVDKVLFDFGKPMGPFQ 524
>gi|254429789|ref|ZP_05043496.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
gi|196195958|gb|EDX90917.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
Length = 695
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 291/521 (55%), Gaps = 20/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I + PPVNAL + GL+ +A + + ++A+V+ G G F G DI F
Sbjct: 13 IGVIRINYPPVNALGHGVREGLQQCLRDALADEQIRAVVVIGEGKTFPAGADIREF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ V++ E K +VAA+ G ALGGGLE+A+GC R+A +LGLP
Sbjct: 69 --GKPPQQP--ALPAVIDEYEASDKLVVAAIHGTALGGGLEVALGCDYRVALDSARLGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL---LK 191
E+ LG++PG GGTQRLPRLVG KA+EM++ + ++E LGL+D +V+ + L L
Sbjct: 125 EVKLGLLPGAGGTQRLPRLVGAQKALEMVVGGNPVKAKEALSLGLVDEMVSGDLLDGALA 184
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+R D A RK +R L D L + E +AR Q AP +C+ +
Sbjct: 185 YTRQLLADNAPLRK--LRDLAVPDAQDGLFDQFE-QSIARKQRGFKAPF-----SCIKAV 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + GV +E ++F EL++ S HVFFA+R +KVP + D R + +V
Sbjct: 237 KAAVELPFDKGVERERELFFELLVSPESAAQRHVFFAEREVAKVPGL-DKNTPKREINQV 295
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA I V L EV + L +G+ I N +G++T ++
Sbjct: 296 AVIGAGTMGGGIAMNFANAGIPVRLLEVKEDALERGVAVIRKNYENTAKKGRITDEQVEQ 355
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ L Y + DVD+VIEAV E++ +K+ +FSEL++ C P ILATNTST+D++ +
Sbjct: 356 RMALIQPTLSYDDLSDVDLVIEAVFENMDVKEAVFSELDRVCKPGAILATNTSTLDVDRI 415
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T + ++G HFFSPA+VM LLE VR E+TS +V+ +M + + I KV V+VG C G
Sbjct: 416 ASFTQRPEDVMGMHFFSPANVMKLLENVRGEKTSDEVVATVMDLSRRIGKVGVLVGVCHG 475
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR A LV+ G ++D + G P+GPF
Sbjct: 476 FVGNRMLHRRQAEAVQLVNEGASPQQVDKVLFDLGFPMGPF 516
>gi|254503061|ref|ZP_05115212.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439132|gb|EEE45811.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 699
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 292/520 (56%), Gaps = 19/520 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVNA + + G+ + +KAI L G G F G DI F K
Sbjct: 20 MALVALNNPPVNAASQALRQGIHQAVSDLQKDPGIKAIGLYGEGRTFIAGADIREFGK-- 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ N +E+ + PIV + G ALGGGLE+A+ CHARIA P ++GLP
Sbjct: 78 -PPQDPWLPDL-----CNFLENSETPIVCIIHGTALGGGLEVALSCHARIAVPSAKVGLP 131
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GGTQR PRL G++ +++M+ K +++++ + GL+DAV EE R
Sbjct: 132 EVTLGILPGAGGTQRAPRLAGVAASLDMITSGKPVSAQKALESGLVDAV---EE--GAPR 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
AL A S +T +L + ++ ++ ++ R + +KT P + C+D +E
Sbjct: 187 DLALKAAQALADGTLSHRKTGELDTDAD-QQAIEAYRKKLQKTQPLLFSPHRCVDAVEAS 245
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ KE +F++ + GL+H FFA+RA SK+P + PR + K+ VI
Sbjct: 246 TLPLA-DGLKKERSLFQDCMESPQRAGLIHAFFAERAVSKIPEAKET---PRQIAKIGVI 301
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL- 373
GGG MGSGIATA +L V L E + L +G+ TI N+ G V RGKL DK + L
Sbjct: 302 GGGTMGSGIATACLLAGFDVTLTERDQGGLDRGLATIAKNLDGAVKRGKLAADKRDQILS 361
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
L ++ + D++IEAV E + +K+ IF+EL+K +LA+NTS +D+N +
Sbjct: 362 NNLSSAVELGALSEADLIIEAVFEEMDVKRSIFTELDKVAKQGAVLASNTSYLDINEIAA 421
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS +IG HFFSPAHVM LLE+V ++T+ + + K +KKV V G C GF
Sbjct: 422 VTSRPQDVIGLHFFSPAHVMRLLEVVVADKTAPDAVATGFALAKKLKKVAVRAGVCDGFI 481
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y ++A ++ G +D+A+ +FG +GP+Q
Sbjct: 482 GNRILSFYKKAADYMMMDGASPEEVDTAMTNFGFAMGPYQ 521
>gi|335423412|ref|ZP_08552434.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
gi|334891993|gb|EGM30238.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
Length = 695
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 197/531 (37%), Positives = 297/531 (55%), Gaps = 23/531 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ E D + +IT+ NPPVNAL + G+ D ++ + D KA+++ G G F G
Sbjct: 5 VSYERDGD-IGVITVDNPPVNALGHAVRQGIVDALDKGLADDGAKALMIIGGGRTFPAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +PDV V ++E+ K ++AAV G ALGGG+E+ +GC R+A
Sbjct: 64 DIREFGK---PPQEPSLPDV-----VQVLENSDKLLIAAVHGTALGGGMEITLGCDYRVA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL+G A++ ++ K + + + +G+ID VV+
Sbjct: 116 LDSAKMGLPEVNLGLLPGAGGTQRLPRLIGAKAAMQAIVEGKPMKAAKLKDMGVIDEVVS 175
Query: 186 SE---ELLKVSRLWALDIAARRKPWIRSLHR-TDKLGSLSEAREVLKLARLQAKKTAPNM 241
+ E + + D A RRK S+ + +D + S E +AR KK
Sbjct: 176 GDLKAEAIAYAEKLVADGAPRRKVSELSVEKESDNVFSEFEQ----SIAR---KKRGFLA 228
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
P H C+ ++ +G+ +E ++F EL+ S HVFFA+R KVP ++
Sbjct: 229 PFH--CIKAVQAATELDFAAGMKRERELFTELLNSPESAAQRHVFFAEREVGKVPGISKE 286
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
K R +++V +IG G MG GIA + I V + E+ E L KG+ I N +
Sbjct: 287 TPK-RDIKQVGIIGAGTMGGGIAMNFLSAGIPVKMLEMKQEALDKGVALIRKNYEATAKK 345
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G++T D+ + ++ L Y + DVD+VIEAV E++ +K+++F EL++ C ILAT
Sbjct: 346 GRMTSDQVEKCMSLISTSLSYDDLSDVDLVIEAVFENMKVKKQVFGELDRVCKDGAILAT 405
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTST+D+N + + T+ + +IG HFFSPA+VM LLE VR E TS +VI +M + K I K
Sbjct: 406 NTSTLDVNEIAQSTNRPEDVIGMHFFSPANVMKLLENVRGEATSDEVIATVMDLSKRIGK 465
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V V+VG C GF NR A LV+ G ++D + FGLP+GPF
Sbjct: 466 VGVLVGVCNGFVGNRILHKRQAQAVKLVNEGATPSQVDKVLFDFGLPMGPF 516
>gi|84684289|ref|ZP_01012191.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Maritimibacter alkaliphilus HTCC2654]
gi|84668042|gb|EAQ14510.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Rhodobacterales bacterium HTCC2654]
Length = 698
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 287/523 (54%), Gaps = 22/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I + NPPVNA + GL D A + ++ I + G F G DI F
Sbjct: 19 VGLICIDNPPVNASGQAVRQGLVDAVAAANADAGIEVIAIYAAGRTFVAGADIKEF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ +N IE +KP+++A G ALGGGLE+ MG HAR+ ++GLP
Sbjct: 75 --GKTPLEP--SLPDTINAIEASEKPVISAPHGTALGGGLEICMGTHARVGVKGLRVGLP 130
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GTQR PRL+G+ ++M L + ++ EE +GLID + E R
Sbjct: 131 EVNLGLLPGASGTQRGPRLMGMKNTLDMALSGRQVSGEEALSMGLIDGLEAGE-----PR 185
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
AL A RT LG + + A++ AKK M H ++IE
Sbjct: 186 DVALAAAEDVLSGKLKTRRTSDLGVELDEAALDDAAKMVAKK----MKHHPTAPNMIEAV 241
Query: 255 IVHGG--YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G G+ E K F E + S+G+ H FFA+RA SK+P PR + K+
Sbjct: 242 RMSTGPMADGMAYERKSFMEGLKDPASQGMRHAFFAERAVSKIPEGK---ATPREIAKIG 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MGSGIATA + + V L E++ E L KG+ I N+ G V RGK+++ K +NA
Sbjct: 299 VIGGGTMGSGIATAALTSGFAVRLIEISQEGLDKGVGFITGNLGGAVKRGKMSEAKRDNA 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ L+ D DVD+VIEAV E++ +K+ IF +L+K C P ILA+NTS +D+N +
Sbjct: 359 MARLEPSTDMESLSDVDLVIEAVFENMDVKKDIFGQLDKICKPGAILASNTSYLDINEIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS + +IG HFFSPA++M LLE+V ++T+ +V+ + K +KKV V G C GF
Sbjct: 419 SATSRPEDVIGLHFFSPANLMRLLEVVVADKTAPEVVATGFALAKKMKKVGVRAGVCDGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y ++A L+ G +ID+A+ FG +GP++ G
Sbjct: 479 IGNRILAYYGKTAGYLMEDGASPQQIDNALEDFGFAMGPYKVG 521
>gi|392951320|ref|ZP_10316875.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
gi|391860282|gb|EIT70810.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
Length = 712
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 287/520 (55%), Gaps = 12/520 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNA+ I AGL + + D VK+ VL G F G DI F K
Sbjct: 27 DGVAVITLNNPPVNAIDQGIRAGLLESVGRLAADDSVKSAVLIGANDTFVAGADIKEFGK 86
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
L P ++E ++ +E KPIVAA+ G LGGGLE+A+ H R+A K +LG
Sbjct: 87 -------PLPPPTTIE-SLSAMEASPKPIVAALAGNTLGGGLEIALAAHWRVAVAKAKLG 138
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE++LG++PG GGTQRLPRLVG +KA++M+L + + +LG++D +V + LL
Sbjct: 139 LPEVSLGIMPGAGGTQRLPRLVGGAKALDMILSGTPVNGTKALELGIVDELVDGD-LLAG 197
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A I A +P + DK+ + A + A + +K + ++ ++
Sbjct: 198 AIAFARKIVAEGRPLRVTSQLQDKVANTDPA--IFADAIKKNEKKWKGLLSPYKIVEAVQ 255
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G E KV++E + L ++FFA+R +K+P+V LKP V+ A
Sbjct: 256 AACTLPFAEGAALELKVYRETQASPQRKALTYMFFAEREAAKIPDVPR-DLKPAPVKSAA 314
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA + I V + E+ E L G+ I+ N V+RG TQ + +
Sbjct: 315 VIGAGTMGGGIAMSFANAGIPVKILELKQEALDAGLARIKGNYATSVSRGSTTQAQMDER 374
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L + DY++ D D+V+EAV E++ +KQ +F L+ IL TNTST+D++ +
Sbjct: 375 LGRISTTTDYAQIGDADIVVEAVFENMEIKQGVFKTLDGVMKQGAILGTNTSTLDIDQIA 434
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +IG HFFSPA+VM L+E VR +TS ++I M V K I KVPV+ GNC GF
Sbjct: 435 NVTKRPQDVIGMHFFSPANVMKLVENVRGAKTSPEIIGRTMAVSKQIGKVPVLAGNCDGF 494
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR Y + L+ G ++ID+A++ FG P+G F
Sbjct: 495 IGNRILAAYGRECDFLLEEGATPWQIDTALQGFGFPMGLF 534
>gi|375107014|ref|ZP_09753275.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374667745|gb|EHR72530.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 696
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 289/524 (55%), Gaps = 15/524 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+IT+ PP+N L + G+ + A + V A+VL G+ FSGG D+ F
Sbjct: 12 GVAVITMDKPPINGLGFALRHGVAGAMDRALADPGVSAVVLAGSARAFSGGADVTEFGTP 71
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+ A + L ++++L+E KP+VAAV G LGGG ELAMGCH R+ QLGL
Sbjct: 72 NAAREPRL------PVLIDLLETSPKPVVAAVAGQCLGGGFELAMGCHFRVVQADAQLGL 125
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRL+GL +A+ M ++S S + +K + V ++ +
Sbjct: 126 PEVKLGLLPGAGGTQRLPRLLGLERALNM-IVSGSPAAGATFKGTPVADAVVDAGVVDAA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A + + P L RT L + A L+ AR A +P C+D +
Sbjct: 185 VAFAEGVVKDKTP----LRRTRDLKVAAPNAEAFLQFARNTVGAMAKGLPAPGKCVDAVA 240
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
+ + E ++F L+ SR L HVF A+RA SK+ ++ D L R + KV
Sbjct: 241 LSLSKPFDEALRLEREMFLALMGTPESRALRHVFGAERAASKIADLPADAPL--RSIAKV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++
Sbjct: 299 GVIGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLGTIRRNYENSMKKGKLKPEQVEQ 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ L Y F DVD+VIEAV E++ +KQ++F L++ C P ILA+NTS ++++ +
Sbjct: 359 RMGLVTPTLSYDAFADVDLVIEAVFENMDVKQQVFETLDRVCKPGAILASNTSYLNIDAI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR +T+ V+ M + K IKKV VV G C G
Sbjct: 419 AGFTKRPADVLGLHFFSPANVMRLLEVVRGAKTAPDVLATAMALAKKIKKVAVVSGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR Y +A+ L++ G ++D A++ FGL +GPF+ G
Sbjct: 479 FIGNRMLARYGAAAQGLINAGALPQQVDGALQKFGLAMGPFRMG 522
>gi|254510901|ref|ZP_05122968.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
gi|221534612|gb|EEE37600.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
Length = 697
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 294/522 (56%), Gaps = 20/522 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A+++ NPPVNAL + + GL E A + D +A+++ G G + G DI F K
Sbjct: 11 DDIAVLSARNPPVNALGVDVRRGLLSGIERAEA-DGARAVLIYGEGRTYFAGADIREFGK 69
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + + N IE +V+A+ G ALGGGLE+A+ CH RIA P ++G
Sbjct: 70 PP--------QEPGLPALCNRIEASPLLVVSALHGTALGGGLEVALSCHYRIAVPSAKVG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLK 191
LPE+ LG+IPG GGTQRLPR++G+ A++M+ + + + E ++G++D + + +
Sbjct: 122 LPEVNLGIIPGAGGTQRLPRIIGVEAALDMITTGRHVRAAEALEMGVLDKIGEGDPREVG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
++ AL A + I + + + + VLK R Q AC
Sbjct: 182 LAYTRALLAANTPRRPICEMPTPEPIDFDARYEAVLKKGRGQLSPAVAVRAVQAACE--- 238
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
SG+++E ++F EL+ D +GL+H FFA+RA SK+P + G+ PR + ++
Sbjct: 239 ----ADDFASGLVRERELFTELMASDQRKGLIHAFFAERAVSKLPELQ--GVVPRDLHQI 292
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MG+GIAT+ +L + VVL E+ E I +N+ G V RGKL+Q ++
Sbjct: 293 GVIGGGTMGAGIATSALLAGLPVVLLEMTPEAAKAAQARIASNLAGAVKRGKLSQSDHDD 352
Query: 372 ALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
L+ L+ LDY ++VD+VIEAV E + +K+++F++L+ C +LATNTS +D+N
Sbjct: 353 ILQNRLELALDYDALQNVDLVIEAVFEDMEVKKQVFAQLDAVCKGGAVLATNTSYLDINE 412
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T D +IG HFFSPAHVM LLE+V +RT+ +V+ +GK + K V G C
Sbjct: 413 IAALTRRPDDVIGLHFFSPAHVMKLLEVVVADRTAPEVVATGFALGKRLGKTAVRAGVCD 472
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y A +V G ++ID+A+ +FG +GPF
Sbjct: 473 GFIGNRILSAYRTCADHMVLDGASPYQIDAALTAFGFAMGPF 514
>gi|410612368|ref|ZP_11323447.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168108|dbj|GAC37336.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 714
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 290/522 (55%), Gaps = 14/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL A + + V+ IV++ FSGG DI+ F
Sbjct: 27 VAVLWMQNPPVNALSKSVRVGLIKHLNAAIADESVQVIVISSKQSLFSGGADISEFS--- 83
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GD L P++ V+++IE+ KP+VA + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 84 -GGD--LEPNLPA--VLDVIENSPKPVVAVLNGPAFGGGLEVALSCHYRLTFASNKVGLP 138
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTSEELLKVS 193
E+ LG++PG GGTQRLPRL G+ +A++M++ + + ++ KL G+ D VV S E L S
Sbjct: 139 EVNLGILPGAGGTQRLPRLAGVQQALDMIVSGRPVAAD---KLPGVFDVVVDSPETLLTS 195
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
L + +R K+ S +E+ R A + C+ +E
Sbjct: 196 ALAFCEKVIADGSKVRKTCDV-KIDVSSAPKELFAQYRQGLATKARGFFAPERCIQAVEA 254
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ G+++E ++F E + +R H FFA+RA S V + D R +++V +
Sbjct: 255 SVELPFAQGLIREGELFMECMRSKEARAQQHFFFAERAASHVKDF-DKETPVRDIKQVGI 313
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA I V++ E+ + L KG+ I N +GKLT + + +
Sbjct: 314 IGAGTMGGGIAMNFANAGIPVIMLELKQDALDKGLALIRKNYENSAKKGKLTAQQVEDRM 373
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L G +Y+ +VD+VIEAV E + +KQ++F L+ C P ILA+NTST+D++ +GE
Sbjct: 374 GLLTGSTEYAALCNVDLVIEAVFEKMSVKQEVFKALDAVCKPGAILASNTSTLDIDEIGE 433
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T + +IG HFFSPA+VM LLE+V+T +TS +VI M + K I KV V+VG C GF
Sbjct: 434 ATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTTMKMAKKINKVAVLVGVCFGFV 493
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y + A ++ G ID I FGLP+GPF G
Sbjct: 494 GNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMG 535
>gi|163744419|ref|ZP_02151779.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
gi|161381237|gb|EDQ05646.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
Length = 698
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 294/528 (55%), Gaps = 30/528 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + ++ + NPPVNAL+ + GL + + A + + V+A+++ G G F G DI F
Sbjct: 10 HDDIVVLRIENPPVNALSQAVRQGLAEGMDRAEAEEGVRAVMIVGEGRAFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P + L + N IE +VA++ G++LGGGLE+A+ H RIA P
Sbjct: 70 K----------PPMEPHLPNLCNRIEASPLLVVASMHGVSLGGGLEVALSAHYRIAQPTA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE- 188
++GLPE+ LG+IPG GGTQRLPRL+G+ A++ + + I + + ++G++D V +
Sbjct: 120 RVGLPEVHLGLIPGAGGTQRLPRLIGVEPALDAITTGRHIKAPQALEMGIVDRVEEGDPQ 179
Query: 189 ---LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
L V L LD A R+P I + + + LK R Q
Sbjct: 180 EVGLAYVREL--LDSGAERRP-ICDMPAPAPIDWDAAYEATLKKGRGQISPAE------- 229
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+ ++ G+ G+ E ++F EL+ D +G++H FF++RA S +P + G++P
Sbjct: 230 -AVRAVQAGVEKPFEEGMKAERRIFSELMNTDQRQGMIHAFFSERAVSNLPELK--GVEP 286
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++ + VIGGG MG+GIATA +L+ VVL E+ E I N++G + RGK+
Sbjct: 287 RTLKAIGVIGGGTMGAGIATAALLSGFNVVLIEMKDEAAKAAHDRISGNLQGALKRGKID 346
Query: 366 QDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q K + + L DY+ DVD+V+EAV E + +K+++F +L+ C P C+LA+NTS
Sbjct: 347 QAKFDTLTGEALTVSTDYASLSDVDLVVEAVFEDMDVKKQVFGKLDAVCKPGCVLASNTS 406
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D++ + + TS +IG HFFSPAHVM LLE+V ++T+ V+ +GK + K+ V
Sbjct: 407 YLDVDEIADSTSRPADVIGLHFFSPAHVMKLLEVVVADKTAPDVVATGFALGKALGKISV 466
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR Y +A +V G ++ID+A+ FG +GPF
Sbjct: 467 RAGVCDGFIGNRILATYRTAADHMVLDGASPYKIDAALEKFGFAMGPF 514
>gi|118094872|ref|XP_422690.2| PREDICTED: peroxisomal bifunctional enzyme [Gallus gallus]
Length = 726
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 211/534 (39%), Positives = 301/534 (56%), Gaps = 28/534 (5%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
G VA+I L NPPVNAL++ ++ L+D + A + VKA+ + G G+FS G DI F
Sbjct: 7 GAAAVAVIRLRNPPVNALSLTVLQALEDGLKRADADPSVKAVTICGENGKFSAGADIRGF 66
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
G + L P +V+LIE +KP+VAA+EG+ALGGGLE+A+GCH RIA + +
Sbjct: 67 SSPKKQG-LGLGP------IVSLIERSEKPVVAAIEGIALGGGLEVALGCHYRIAHVQAR 119
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSE 187
+GLPE+T+G++PG GTQRLPRLVG+ A++++ + I + E KLGL+D VV T E
Sbjct: 120 MGLPEVTIGLLPGAEGTQRLPRLVGVPAALDIITTGRHIPATEALKLGLVDEVVEENTVE 179
Query: 188 ELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
++++ +L + RR SL +L ++ L A ++ KK A +
Sbjct: 180 AAIRLANKLIGQPLGHRR----LSLKPVPRLPNMEA---FLSEALVKVKKRAQGCLAPEL 232
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK-- 304
C I+ GV KE ++F L+ ++ L + FFA+RA K + K
Sbjct: 233 CFQAIKAATEQPFADGVRKERELFNILLTSGQAKALQYAFFAERAVEKWTTPSGASWKSA 292
Query: 305 -PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLV 359
P+ +RK AVIG G MG GI T+ + I VV E N EYL G K + E +
Sbjct: 293 SPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVVALEQNLEYLNTGRKAVMLLLEREAMKM- 351
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G T D N A L+ +D+ +DVD+VIEAV E++ LK++IFS+L + C P L
Sbjct: 352 EQGAQTLDFHNPA--QLQFTVDFDVLRDVDLVIEAVFENMALKKEIFSKLSRICKPEAFL 409
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
TNTS ++++ + T ++IG HFFSPAHVM LLEI+ TS I + + K++
Sbjct: 410 CTNTSALNIDDIASVTGRPQQVIGTHFFSPAHVMRLLEIIYGRHTSPNTIATAIQLAKVM 469
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KKV VVVGNC GF NR FPY Q A L+ G +D + FG IGPF+
Sbjct: 470 KKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEDVDQVLEDFGFKIGPFR 523
>gi|389695783|ref|ZP_10183425.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
gi|388584589|gb|EIM24884.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
Length = 695
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 287/518 (55%), Gaps = 17/518 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPPVNA + + AGL EA S ++A+V+ G F G DI F +V
Sbjct: 20 VALIEIDNPPVNATSQAVRAGLLAAIREADSDPRIEAVVIACAGKTFVAGADIREFGQVP 79
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV +N IE C KP+VAA++G ALGGG E+A+ CHAR+A P LGLP
Sbjct: 80 RE---PHLPDV-----INAIEACSKPVVAAIQGTALGGGCEIALACHARVAEPGASLGLP 131
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRLVGL A++++ + + + E +LGLID + +S +L + +
Sbjct: 132 EVKLGLVPGAGGTQRLPRLVGLEAALDLVTGGRPVRAPEALRLGLIDRL-SSGDLRQDAM 190
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
A ++ +P R+ R+ + L K+A ++ K P A L ++
Sbjct: 191 ALARELIG--QPLRRTGERS--VAPLDAETASAKVAEIRKKARGAEAPGKAAELVLLAAN 246
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ +E + F EL S L H FF +R ++P + + +PR ++KV ++
Sbjct: 247 LPL--QDGMARERETFLELRSSAQSAALRHAFFGEREVMRLPGLDSV--EPRPIQKVGIV 302
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MGSGIA A V + E + + L G + V G++T + LK
Sbjct: 303 GAGTMGSGIAIAFADAGFDVRIVETSEQALSAGQARVTDVYDKQVASGRITPAAQDERLK 362
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ + S D D+VIEAV E + +K+ +F +L+ PP ILATNTS +D++++
Sbjct: 363 AIGYAIGTSSLLDRDLVIEAVFEDLEVKRALFRDLDAILPPGTILATNTSYLDVSLIAAA 422
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
TS ++G HFFSPAHVM LLEIVRT+ T+A V+ + + K ++K+PVV C GF
Sbjct: 423 TSRPADVVGLHFFSPAHVMKLLEIVRTDATAADVVATGLALAKRLRKIPVVCRVCDGFVG 482
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR Y Q A L+ G +D+A+ +FG P+GPF
Sbjct: 483 NRILSRYRQQAEYLLEEGALPHEVDAALEAFGFPMGPF 520
>gi|154252397|ref|YP_001413221.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Parvibaculum
lavamentivorans DS-1]
gi|154156347|gb|ABS63564.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Parvibaculum
lavamentivorans DS-1]
Length = 692
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/519 (36%), Positives = 284/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL +PPVNAL+ P+ G+ + ++A D VKAIVL G F G DI F K
Sbjct: 16 VAVLTLNSPPVNALSAPVREGINNGIKQAMENDAVKAIVLICEGKTFIAGADITEFGKAP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S+ +N+IE KP++AA+ G ALGGGLE+A+ CH R+A P + GLP
Sbjct: 76 AG--------PSLFDALNMIEFASKPVIAAIHGTALGGGLEVALTCHYRVAVPSAKCGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+VG KA+EM+ + +++ ++GL+D + +L +
Sbjct: 128 EVNLGLLPGAGGTQRLPRIVGPEKALEMVTSGSHVGAKKCLEMGLVDELTEEGKLRDGAI 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A I A ++P R +DK+ + E+ R + + + IE
Sbjct: 188 AFAKKIVAEKRPLKRVRDLSDKVEAARGKPEIFSEFRKANARKFRGFLAPEYNIQCIEAA 247
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 313
+ G+ E K+F+ELV S HVFFA+R K+P+V D P V KV +
Sbjct: 248 VNLPFDEGIKVEQKLFRELVTGTQSAAQRHVFFAERQVWKLPDVPADTPTIP--VNKVGI 305
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA + + V + E E L +GI TI N +G+ + ++ +
Sbjct: 306 IGAGTMGGGIAMNFLNVGLPVTIVETKQEALDRGIATIRKNYENSAKKGRFSMEEVEKRM 365
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L G L+ D D+VIEAV E++ +K+++FS+L+ ILATNTS ++++ +
Sbjct: 366 GLLTGSLEMEALADSDLVIEAVFENMDVKKQVFSKLDAIVKQGAILATNTSALNIDEIAT 425
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
+ +IG HFFSPA+VM LLE+VR ++TS VI M + K I K+ +VG C GF
Sbjct: 426 AVKRPEAVIGLHFFSPANVMRLLEVVRADKTSKPVIATSMQLAKKIGKIAALVGVCPGFV 485
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 486 GNRILAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 524
>gi|239813853|ref|YP_002942763.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239800430|gb|ACS17497.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 711
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 286/522 (54%), Gaps = 17/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNAL + + GL E A + A+++ G G F G DI F K
Sbjct: 23 VFVVTIDNPPVNALGVDVRRGLVAAIEAAEADSAAAAVLIVGAGRNFIAGADIREFGKTP 82
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P+V + IE+C KP+VAA+ G ALGGGLE+A+ H R+AAP +LGLP
Sbjct: 83 ---QPPSLPEVCLA-----IENCGKPVVAAIHGAALGGGLEVALSAHYRLAAPSAKLGLP 134
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR PRL+G+ A+E++L + ++E LGL+D + +
Sbjct: 135 EVQLGLLPGSGGTQRAPRLIGVKPALELVLSGRHAGAKEALSLGLVDRLGNEADARAEGL 194
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A ++ A + P + RT + G L++ +R L+ AR + + + ++ +
Sbjct: 195 AYAQELVAAKAP----VRRTREAGGLADKEASRAALEAARADTARKSRGLFSPMKIIEAV 250
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E + G+ E K+F + + GL+H FFA+R K P PR +
Sbjct: 251 EAALTLPFDEGMALERKLFLQCIDSPQRAGLIHAFFAEREVLKAPETRSAA--PRALASA 308
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T +
Sbjct: 309 GIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIKKGRMTPEAKTA 368
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ G Y VD+V+EAV E + +K+ +F+EL++ C +LATNTS +D++ +
Sbjct: 369 VMARFSGSTSYDALAQVDIVVEAVFEDMGVKKAVFAELDRVCKRGAVLATNTSYLDIDEI 428
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
E S ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV G C G
Sbjct: 429 AESISRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVRAGVCDG 488
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y Q+A ++ G ++ID A+R+FG P+GPFQ
Sbjct: 489 FIGNRILAVYRQAADHMMEDGASPYQIDEAVRNFGYPMGPFQ 530
>gi|408373582|ref|ZP_11171277.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
gi|407766509|gb|EKF74951.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
Length = 696
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 291/521 (55%), Gaps = 19/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ II + PPVNAL + GL+ EA + D ++A+++ G G F G DI F
Sbjct: 13 IGIIRIDYPPVNALGHGVRTGLQSCLREAMADDSLQAVIVIGEGKTFPAGADIREF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P S+ V+N E K +VAA+ G ALGGGLE+A+GC R+A +LGLP
Sbjct: 69 --GKPPQPP--SLPEVINEYEASDKLVVAAIHGTALGGGLEVALGCDYRVALDSARLGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL---LK 191
E+ LG++PG GGTQRLPRLVG +A++M++ K + + + +LGL+D VV+ + L L
Sbjct: 125 EVNLGLLPGAGGTQRLPRLVGARQALDMIVGGKPVKAAQARELGLVDDVVSGDLLDGALA 184
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+R D A RR+ IR + G+ + +AR Q AP +C+ +
Sbjct: 185 FTRRLLADRAPRRR--IREMDVPGDTGAELFSEFEQSIARKQRGFKAPF-----SCIKAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + G+ +E ++F +L++ S HVFFA+R +KVP + K R ++ V
Sbjct: 238 QAAVELPFDQGIERERELFFKLLISPESAAQRHVFFAEREVAKVPGLDKTTPK-RDIQTV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA I V L EV + L KG+ I N + +G+++ ++
Sbjct: 297 AVIGAGTMGGGIAMNFANAGIPVKLLEVKQDALDKGLAIIRRNYQNTAKKGRISAEQVEQ 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ L Y E DVD+VIEAV E++ +K+ +F+EL++ C P ILATNTST+D+N +
Sbjct: 357 RMALIQPTLSYDELGDVDLVIEAVFENMDVKKAVFTELDRVCKPGAILATNTSTLDVNRI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE VR ++T+ VI +M + + I KV V+VG C G
Sbjct: 417 AAFTGRPQDVMGMHFFSPANVMRLLENVRGDKTADDVIATVMDLSRRIGKVGVLVGVCHG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR A LV+ G ++D + G P+GPF
Sbjct: 477 FVGNRMLHKRQAEAVQLVNEGASPQQVDKVLFDLGFPMGPF 517
>gi|226355857|ref|YP_002785597.1| peroxisomal bifunction [Deinococcus deserti VCD115]
gi|226317847|gb|ACO45843.1| putative Fatty acid oxidation complex subunit alpha [Deinococcus
deserti VCD115]
Length = 692
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 287/525 (54%), Gaps = 14/525 (2%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
++ D + ++++ NPPVNA + + GLK + A + D V+A+V+ G+G F G DI
Sbjct: 6 QIRQDDILVLSINNPPVNAFSPGVPEGLKAGLDAAQADDTVRAVVIIGSGRTFVAGADIK 65
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F PD+ V ++ KP VAA+ G ALGGGLELA+ C R+A P
Sbjct: 66 TFNMPR-----EQAPDLRG--TVEKLDRFPKPTVAAIHGTALGGGLELALACTYRVAVPD 118
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
QLGLPE+ LGV+PG GGTQRLPR+VG +K +EMML I E +LGL+D +V +
Sbjct: 119 AQLGLPEVKLGVLPGAGGTQRLPRVVGAAKGLEMMLSGNPIRGAEARELGLVDELVQGDL 178
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L R AR P R R+ + GS EV AR KKT +
Sbjct: 179 LEGAVRFARAHADAR--PLPRISERSVEGGSP----EVFAAARESIKKTHRGQLSPSLII 232
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D+ E +G EA+ F + SRGL H+FFA+R ++K+P ++ +
Sbjct: 233 DLAEMAATQPFQTGWEAEAEKFMQAKDSPQSRGLRHIFFAERESAKIPGLSK-DTPTLDI 291
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R V +IG G MG GIA + I V + E E L +G+ I N +G++T +
Sbjct: 292 RSVGIIGAGTMGGGIAMNFLNVGIPVTIVETAQEALDRGLGVIRRNYENSAKKGRMTMED 351
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ +L L+ + D D++IEAV E++ +K++IF++L+ P ILATNTST+D+
Sbjct: 352 VEKRMALLTPTLNMEDLADADIIIEAVFENMDVKKEIFTKLDAIAKPGAILATNTSTLDV 411
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + T + +IG HFFSPA+VM LLEIVR ++TS V+ M + K I+KV VVVG
Sbjct: 412 NEIASVTGRPESVIGLHFFSPANVMKLLEIVRADKTSDSVLATSMALAKKIRKVGVVVGV 471
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y AR +V G +D+++ + GLP+GPFQ
Sbjct: 472 CDGFVGNRMIHRYGDEARKIVEEGAAPQDVDASMNALGLPMGPFQ 516
>gi|383643635|ref|ZP_09956041.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas elodea ATCC 31461]
Length = 674
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 289/531 (54%), Gaps = 26/531 (4%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T GN V I+T NPPVNAL + GL+ EEA S D ++A+V+T G F G D
Sbjct: 6 TSRQGN--VLILTSDNPPVNALGAAVRQGLQAGIEEARSDDSIQAVVITCAGKTFFAGAD 63
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K M + S+ ++V+ IE KP++AAV G ALGGG E+A+ H RIA
Sbjct: 64 ITEFGKA--------MAEPSLPVLVDQIEALDKPVIAAVHGTALGGGCEVALASHYRIAV 115
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P + GLPE+ LG++PG GGTQR+PR+ G+ A+EM I + + + GL+D +
Sbjct: 116 PSAKFGLPEVKLGILPGAGGTQRMPRVAGVEVALEMATKGDPIPAVQAKEAGLVDRLAGE 175
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMP 242
+ LL + +A ++ KP RS R + +A K AK+ APN
Sbjct: 176 DSLLADAVAFANEVIG--KPVSRSSERPVTV----DAETFAKFRAANAKRFRGLDAPN-- 227
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+D+IE+ GV E F +L+M S L H+FFA+R +K+ + D
Sbjct: 228 ---TIIDIIEQTAGKPYAEGVQAERMGFMKLIMGQQSAALRHIFFAERKAAKIDGIAD-D 283
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
++ R +R+V VIG G MG GI+ + + V + E+ E L +G + N +G
Sbjct: 284 IQLRDIRRVGVIGAGTMGGGISMNFLSAGVPVTIVEMAQEALDRGTGVMRKNYEASAAKG 343
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
++T ++ A+ +LK L++ + + D++IEAV ES+ +K+ +F L+ P ILA+N
Sbjct: 344 RMTAEQVEKAMGLLKPTLNFDDLAECDLIIEAVYESMDVKKDVFGRLDTIAKPGAILASN 403
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS ++++ + TS ++G HFFSPA+VM LLEIVR +T+ V+ M + K IKKV
Sbjct: 404 TSYLNIDEIAAATSRPQDVVGLHFFSPANVMKLLEIVRGAKTADDVLATAMALSKKIKKV 463
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+ G C GF NR P A ++ G +ID +FG+P+GPFQ
Sbjct: 464 AVIAGVCYGFIGNRMLMPRQVEATKMLLEGATPEQIDKVHVAFGMPMGPFQ 514
>gi|307729102|ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307583637|gb|ADN57035.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 706
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 281/526 (53%), Gaps = 25/526 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ +PPVNAL+ + GL E A S ++A++L G G F G DI F K
Sbjct: 18 VLLVTIDHPPVNALSADVRRGLLSAVEAADSDASIEAVLLVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE KP+VAA+ G ALGGGLE+A+ H RIAA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEASTKPVVAALHGAALGGGLEVALAAHYRIAAEGARLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK- 191
LPE+ LG++PG GGTQR PRL+G A+++ML + +++E GL+D + SE++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLMLSGRHASAKEALAWGLVDRLGASEDILAE 187
Query: 192 ----VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
V L A AARR L + + + AR Q +K A +
Sbjct: 188 GLAYVHELLASHAAARRT------RDASALSDRTASLAAVAAARAQTEKQARGLFSPLKI 241
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+D +E I G+ E ++F + + GL+H FFA+R K P KPR
Sbjct: 242 VDAVEAAITQPFEDGLRLERQLFLQCIDSPQRVGLIHAFFAEREVLKAPETR--AAKPRP 299
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ + V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++
Sbjct: 300 LETIGVVGGGTMGAGIAVAVLGAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAA 359
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K L G + + D+VIEAV E + +KQ +F+EL++ C +LATNTS +D
Sbjct: 360 KKAELLARFTGSTSHEALANADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLD 419
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + TS +IG HFFSPA++M LLE+V SA V+ + K ++K PV G
Sbjct: 420 IDAIAAGTSRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAG 479
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 480 VCDGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|443718593|gb|ELU09146.1| hypothetical protein CAPTEDRAFT_228818, partial [Capitella teleta]
Length = 525
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 205/533 (38%), Positives = 303/533 (56%), Gaps = 26/533 (4%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
+ DGVA++ + NPPVNAL+ + A +K+ +EA +KAIV++G F G DI
Sbjct: 5 ITRDGVALLQVNNPPVNALSHNVRAEIKNGLDEAGQDKQIKAIVISGKRS-FIAGADITE 63
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
F+ +G S P + ++L +LIE KP+VAA++G ALGGG E+A+ CH RIA K+
Sbjct: 64 FK----SGSYSEWPTI-IDLC-DLIESSGKPVVAAIKGFALGGGHEIAISCHYRIAHEKS 117
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS--- 186
+ G PE+ +G++P GGTQR PRLVGL A++++ + I + + +KLG++D VV
Sbjct: 118 KFGFPEVDIGILPAAGGTQRFPRLVGLEAALDLIPSGRHIGAAQAFKLGIVDKVVRGDAV 177
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
EE +K ++ A + R+ R + + SL +A +KLA KK P H
Sbjct: 178 EEAVKFAKSIAGEPLVDRRTSQRPVMGAENAVSLRDA--AVKLA--MKKKKGMIAPIH-- 231
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR---GLVHVFFAQRATSK--VP-NVTD 300
C+ + G + G+ EA E ML TS L + FFAQRA K +P +
Sbjct: 232 CIKAVM-GSLLPFEQGMEIEAS---EGFMLFTSGQMGALQYAFFAQRAAPKWSLPCGASF 287
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+K R +R AVIG G MG+GIA A + I V L E + ++L KG+ ++ G V+
Sbjct: 288 KTVKGRPIRNAAVIGAGTMGTGIAMAMLNAGIPVTLVEQDRKFLDKGVSLLKLLYAGSVS 347
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
K+TQD+ + L L + Y +VD+VIEAV E++ LK++IF+EL++ CPP L
Sbjct: 348 LRKITQDQCDAILSKLNTAVGYKSLTNVDLVIEAVYENMALKKQIFAELDRICPPETFLW 407
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + T D+++G HFF PA+ M LLE VR + TSA+ + G I
Sbjct: 408 TNTSALDIDEIASATRRPDKVLGTHFFVPAYHMKLLENVRGKLTSAETVASAQMFGTRIG 467
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PVVVGNC GF NR Y+ + L+ G +D +FGLP+GPF+
Sbjct: 468 KIPVVVGNCHGFVGNRMLHKYAHESDFLIEEGCWPEDVDMVAENFGLPLGPFK 520
>gi|121596028|ref|YP_987924.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
gi|120608108|gb|ABM43848.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
sp. JS42]
Length = 705
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 283/521 (54%), Gaps = 16/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++++ NPPVNAL + AGL E+A V+A+++ G G F G DI F K
Sbjct: 18 VLVVSINNPPVNALGQAVRAGLLAAVEQAEGDAAVRALLIVGEGKAFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N +E C K +VAA+ G ALGGGLE+A+ H R+A P LG
Sbjct: 76 --------PQVPPSLPEVCNRLESCGKLVVAAIHGAALGGGLEVALSAHYRLALPAASLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G+ A E+ML K ++++ GL+D +V + +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGVKAAAELMLSGKHLSAKAAAAAGLVDRLVEGTDPVAA 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A ++ A+ R+ R K+ + A L L+ K + ++ +
Sbjct: 188 GLAYANELLAQGAQPRRT--RDLKIADQAAALAELDALALETAKKTRGLFSPGKIVECVR 245
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ KE +F E + +GLVH FFA+R T+K+P PR K+A
Sbjct: 246 AAVELPFDEGIAKERALFVECLNSPQRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIA 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IGGG MG+GI A + + V + E ++E + +G K +E GL+ +G++T +
Sbjct: 304 IIGGGTMGAGITVAALDAGLTVTMIERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAI 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L Y + DVD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 364 LARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV G C GF
Sbjct: 424 AVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y Q+A L+ G + ID A+R FG +GPFQ
Sbjct: 484 IGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQ 524
>gi|187924712|ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715906|gb|ACD17130.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 706
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 284/524 (54%), Gaps = 21/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADADKAVEAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G A++++L + +++E GLID + +S+++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGLIDRLGSSDDILAE 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 249
+ ++ A P + RT +LS+ + + AR + K + + +D
Sbjct: 188 GLAYVHELLAAHAP----VRRTRDAAALSDRAASLAAVATARAETAKKSRGLFSPLKIVD 243
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E I G+ E K+F E + GL+H FFA+R K P KPR +
Sbjct: 244 AVEAAIEQPFDEGLRVERKLFLECIDSPQRAGLIHAFFAEREVLKAPETR--AAKPRTLN 301
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+L+ +K
Sbjct: 302 TIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDASLARGRAHIEKVYDGLIAKGRLSAEKK 361
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++
Sbjct: 362 AALMSRWSGSTSYDALAGADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDID 421
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C
Sbjct: 422 ALASSVSRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVC 481
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 482 DGFIGNRVLAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|334342888|ref|YP_004555492.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103563|gb|AEG50986.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 685
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 297/530 (56%), Gaps = 27/530 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
G+ +IT+ NPPVNAL I + + FE D VKAIVL G F G DI+ F +
Sbjct: 13 GIGVITVDNPPVNALGIKTRLAIAEGFERFGGDDAVKAIVLICGGRTFFAGADISEFGR- 71
Query: 74 HGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P S L V+ +IED KP+VAA+ G ALGGG EL++ CH RIA P +
Sbjct: 72 ---------PPQSPVLHEVMRIIEDSSKPVVAAIHGTALGGGYELSLVCHYRIAVPSAMV 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR+VG+ A++++ K I +++ LG+IDA+ +L +
Sbjct: 123 GLPEVNLGLLPGAGGTQRLPRIVGVEAALDIITGGKPIKAKQALHLGMIDALAEEGKLRE 182
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKL----GSLSEAREVLKL-AR-LQAKKTAPNMPQH- 244
+ +A I A KP +R R +KL G+ + LK AR + K N+ +
Sbjct: 183 DAIAFARRILAEGKPLLRVRDRNEKLEGAKGNPGLFDDYLKKNARAFRGFKAPTNIVRAI 242
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 303
QA +D + +G +E ++F+EL S+ + FFA+R T+K+P++ D+
Sbjct: 243 QAAVDTAPDF-----EAGSRRETELFRELEPSTESQAQRYYFFAERETAKIPDIGKDVPT 297
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
P ++ V VIG G MG GIA + + V L E++ E L +GI I N +G+
Sbjct: 298 LP--IQTVGVIGAGTMGGGIAMNFLNIGVPVTLMEMSQEALDRGIAVIRRNYESAAKKGR 355
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LTQD+ + ++ + VD+VIEAV E + +K+ +F++L+ C ILA+NT
Sbjct: 356 LTQDQVEQRMALITPAIGLEALSQVDLVIEAVFEEMGVKKDVFAKLDGICKQGAILASNT 415
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + TS + ++G HFFSPA+VM LLE+VR ++TS +V+ M +GK I KVP
Sbjct: 416 SFLDVDEIAAATSRPEWVVGLHFFSPANVMRLLEVVRGDKTSKEVVATAMALGKKIGKVP 475
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+ C GF NR S A ++ G ++D A+ +G +GPFQ
Sbjct: 476 VLSRVCFGFIANRIMAKRSAEASAIILEGPSPQQVDKALYDYGFAMGPFQ 525
>gi|402565355|ref|YP_006614700.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402246552|gb|AFQ47006.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 711
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P T
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGT 129
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++++E GL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAQAALDLMLTGRHVSADEALAFGLVDRVAHSDDT 189
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L + ++ + P R L + A+ + AR + K + + +D
Sbjct: 190 LAEGLAYTQELVSLGAP-ARRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 248
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + H +G+ E +F + + GLVH FFA+R +KVP +P V
Sbjct: 249 AVEATLTHAFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRASARP--VE 306
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RLGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDID 426
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C
Sbjct: 427 ELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVC 486
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 530
>gi|296533743|ref|ZP_06896290.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
gi|296265919|gb|EFH11997.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
Length = 698
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 281/522 (53%), Gaps = 16/522 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ T+ NPPVNAL+ P+ AG+ + A V +V+ G G F G DI F
Sbjct: 10 EDGVAVATIDNPPVNALSAPVRAGVMEAVRRAAEDPAVAGLVVLGAGRAFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P + L VV +E KP VAA++G+A GGGLELA+GC AR+ PK
Sbjct: 70 K----------PPIPPALGEVVAALEASPKPAVAAIQGVAFGGGLELALGCDARLVGPKA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
QLGLPE+ LG++PG GGTQR PRL+G + A+ M+ + +E+ LGL DA+V + L
Sbjct: 120 QLGLPEVKLGLLPGAGGTQRTPRLIGAAAALPMIASGDPVPAEKAVALGLADALVEGDLL 179
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
AA P + + RTD+L + ARE + A K A PQ A +
Sbjct: 180 AAAKAKVKALAAAPLPPRLNT--RTDRLDAPG-AREEFEQAATALAKRAREEPQVAAIIQ 236
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G+ KE F L S+ L HVFFA+R +++P + +KPR V
Sbjct: 237 SVRNAFELPLEQGLAKERDFFVALRDDPRSKALRHVFFAEREAARIPGLPRE-VKPRAVN 295
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ AV+GGG MG+GIA + I V L E ++ L + +K + V RG L ++
Sbjct: 296 RAAVLGGGTMGTGIAMSFANAGIPVRLIETDAAALERALKRVADTYAVSVKRGSLAEEAR 355
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L +++G + D+V+EAV E + LK++IF++L + P +LA+NTS +D+N
Sbjct: 356 AKRLALIEGAVGLENAAGTDLVVEAVFEELELKKEIFAKLGQITAPGTVLASNTSYLDIN 415
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+G + ++G HFFSPA+VM LLE+VR E T+ + M VG+ + KVPVVVG C
Sbjct: 416 AMGAASGRPGDVLGMHFFSPANVMKLLEVVRAEATAPDALATAMEVGRKLAKVPVVVGVC 475
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ L+ G ++D A+ FG +GP
Sbjct: 476 HGFVGNRMLAQRTRQVEALLQEGATPAQLDKALTDFGFRMGP 517
>gi|260429999|ref|ZP_05783974.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
gi|260418922|gb|EEX12177.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
Length = 647
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 288/533 (54%), Gaps = 32/533 (6%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+ V DG +A++TL NPPVNA++ + L + E + V+A VL G F G D
Sbjct: 4 LTVRRDGEIAVVTLDNPPVNAISEAVRKELFEMVGELDADPGVRAAVLICAGRTFLAGAD 63
Query: 67 INVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
+ F K P V L VV+ IE +KP VAA+ G ALGGG E+AMGC R+
Sbjct: 64 VREFGK----------PPVEPHLPDVVDRIEGAEKPWVAAIHGAALGGGFEIAMGCRFRV 113
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A ++GLPE+TLGVIPG GT R PRL G+ A++++ + + + + K GLIDAVV
Sbjct: 114 AVESARVGLPEVTLGVIPGASGTVRTPRLAGIETAVDLVTSGRPMPAGKALKAGLIDAVV 173
Query: 185 TSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ E V+ ALD A P + L + EA + AR +A + P
Sbjct: 174 SDLERDAVAFARAALD--AELPPPVSQR----PLAPMPEA--FWQDARKRAAR-----PG 220
Query: 244 HQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
HQA LD + HG + E + F +L D + L H+FFA+RA K +
Sbjct: 221 HQAPLRALDSLRFATEHGFAEAMAHERETFLDLRGSDEAAALRHIFFAERAAPKPSALK- 279
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
G++PR VR V VIGGG MG+GIA A + ++L E + E + +G+ + G V
Sbjct: 280 -GIEPRPVRTVGVIGGGTMGAGIAGACREAGMEILLIERDDEAVTRGLANVGKIFDGAVK 338
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKL+++ + ++G DY+E D D+VIEAV E + +K+ +F+EL + C +LA
Sbjct: 339 RGKLSEEDRAGRMAGVRGSTDYAELADADLVIEAVFEEIGVKRAVFAELGRVCRADAVLA 398
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D + E R IG HFFSPAH+M LLEIV T T+ V+ +G+ +
Sbjct: 399 TNTSYLDPRAIAEGLPDPSRFIGLHFFSPAHIMKLLEIVPTPDTAPDVLATGFALGRALN 458
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PV G C GF NR Y A LV GV + ID+A+R +G +GPF+
Sbjct: 459 KMPVQAGICEGFIGNRILKRYRAEAEALVKQGVAIAEIDAAMRGYGFRMGPFE 511
>gi|429218881|ref|YP_007180525.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
gi|429129744|gb|AFZ66759.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
Length = 703
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/519 (36%), Positives = 291/519 (56%), Gaps = 12/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++T+ NPPVN + + G+K E + +VKA VL G G F G D+ F
Sbjct: 13 VAVLTINNPPVNVFSPGVPEGIKAGLERGNADPEVKAFVLIGGGRSFIAGADVKTFNLPR 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
PD+ + +E KP+VAA+ G ALGGGLE+AMGCH R+A+ ++G P
Sbjct: 73 -----EQQPDMRG--TIAKLEANPKPVVAAMHGNALGGGLEVAMGCHYRVASRALKVGQP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LGVIPG GGTQRLPR++ L +A+ M++ I++E+ + GLID ++ + L +
Sbjct: 126 EVKLGVIPGAGGTQRLPRVIPLQEALTMIVTGNPISAEKAHEFGLIDELIEGDLLEGAVQ 185
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ P IR R KL A +A + +K A + CL+ ++
Sbjct: 186 FAQRAGESGELPKIRD--RDVKLDI--PAHMFFNVATERVRKEARGLIAPLLCLEAVKGA 241
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ +E ++F + D SRGL H+FFA+R +K+ N D +KPR +R V+
Sbjct: 242 VELPFDEGLQREGELFLQAQRSDQSRGLRHIFFAEREAAKI-NGVDRSVKPREIRSAGVL 300
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA I V + E N+E L +G+ TI N +G+LT ++ +
Sbjct: 301 GAGTMGGGIAMNFANAGIPVTIYEANAENLERGLATIRRNYENTAKKGRLTLEQVEERMA 360
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+++G L + + D D VIEAV E + +K+++F L+ C P ILA+NTST+D+N +
Sbjct: 361 LIRGTLSFEDLADADYVIEAVFEDMNVKREVFGRLDAVCKPGAILASNTSTLDVNEIARA 420
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
TS ++++G HFFSPA+VM LLEIVR ++ Q ++ + + K + KV VVVG C GF
Sbjct: 421 TSRPEQVLGMHFFSPANVMKLLEIVRPDKVDDQTLVTSVQLAKTLGKVGVVVGVCDGFVG 480
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y + A+ +V G ++D A+ + GLP+GPF+
Sbjct: 481 NRMINQYGREAQQMVEEGASPRQVDDAMHALGLPMGPFE 519
>gi|114571197|ref|YP_757877.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
gi|114341659|gb|ABI66939.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
Length = 679
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 293/522 (56%), Gaps = 17/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T NPPVNAL + AGL EA S D +KA+V+T G F G DI F K
Sbjct: 12 VLVVTSNNPPVNALGQAVRAGLAAAMAEAASDDAIKAVVITCEGRTFFAGADITEFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V++ IE KP+VAA+ G ALGGGLE+A+GCH R+AA +LG
Sbjct: 70 --------PPVGPSLPEVIDAIEASPKPVVAAIHGTALGGGLEVALGCHYRVAAASAKLG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR+VG+ A+ M+ I + ++GL+D +V ++L +
Sbjct: 122 LPEVKLGLLPGAGGTQRLPRVVGVEAALPMIAKGDPIPAAAAERIGLVDKLVADDQLAES 181
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A +++ I S RTDKL ++ A + R + +AC++ +
Sbjct: 182 GIAFARSVSSATTHPISS-ARTDKLDTVL-ADDFFDNFRKTELRRLKGFEAPEACIEAVR 239
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 311
I GV KE ++F +LV SR L HVFFA+RA K+ ++ D + P + KV
Sbjct: 240 AAIELPFAEGVKKERELFGKLVSGTQSRALRHVFFAERAAGKIDDIPADTPVLP--IAKV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
++G G MG GIA + I V + E + L +G+ I N +RGK T ++
Sbjct: 298 GILGAGTMGGGIAMNFLTAGIAVTILEREQDPLDRGVSIIRKNYERSASRGKFTAEQVEQ 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ L LD ++ D D+VIEAV E++ +K+ +F++L+ P ILA+NTS ++++ +
Sbjct: 358 CMGRLTPTLDMNDLADCDLVIEAVFENMDVKKDVFTKLDSIVKPGAILASNTSYLNVDEM 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T + ++G HFFSPA+VM LLE+VR E+ S V+ M + K + KV VV G C G
Sbjct: 418 AAMTKRPEFVLGLHFFSPANVMRLLEVVRAEKASPAVLKTAMALAKKVGKVAVVSGVCHG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR P Q+A ++ G+ + +D A+ FG+P+GPFQ
Sbjct: 478 FIGNRMLSPRQQAANAMLMQGITPWAVDDALTDFGMPMGPFQ 519
>gi|410446988|ref|ZP_11301090.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
gi|409979975|gb|EKO36727.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
Length = 719
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 299/527 (56%), Gaps = 20/527 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
N +AI+ + NPPVN L+ + AGL D +A + D +K I+LTG G F G DI+ F
Sbjct: 14 NGNIAILEVDNPPVNPLSSGVRAGLTDCIAKANNDDSIKGIILTGAGRSFIAGADISEFG 73
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
QK G PD+ L IE KKP++AA+ G ALGGGLE A+ C+ R+ K
Sbjct: 74 QKPDG-------PDLHTAL--KEIEFSKKPVLAAINGTALGGGLETALVCNYRMGTNKAI 124
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+GLPE+ LG++PG GGTQRLPRL+G S+A++MM+ I++++ + G+IDA+ + +
Sbjct: 125 VGLPEVNLGLLPGAGGTQRLPRLIGPSQALKMMIAGTPISAKKALQQGVIDAISENSLIE 184
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
I P +R + +KL A +L A+ A KT +
Sbjct: 185 DGIAFLQDKITLSEHPKVRD--KNEKLLEARGADNILAEAKALAAKTRRGQFAPGQIISC 242
Query: 251 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKPR 306
+E I + G+ KE++ F E ++ ++H+FF +RA SK+ P T +
Sbjct: 243 VEAAINEDDFDIGMKKESEYFLECLVHPQREAMIHIFFGERAASKISDIPKETPL----H 298
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ V+G G MG GIA I V++ + + + L +G+ IE N + +V RG+++Q
Sbjct: 299 QINSAGVVGSGTMGGGIAMNFANAGIPVLILDQDEKNLSRGMGVIEKNYQMMVDRGRMSQ 358
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
D+ + ++++ L Y + DVD+V+EAV E++ LKQ+IF L+ A ILA+NTS +
Sbjct: 359 DQKDTVMQIITPTLSYEDLADVDIVVEAVYENLELKQEIFKSLDTAVNDQAILASNTSGL 418
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + T+ ++++G HFFSPA+VM LLE+VR ++S + + +M +GK + K VV
Sbjct: 419 DIDAIASSTNRPNKVVGTHFFSPANVMRLLEVVRGSKSSDETMATVMALGKKMGKASVVS 478
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
N GF NR + Y+ A +L+ G +IDSA+ SFG+ +GPF+
Sbjct: 479 LNAPGFIGNRMLYGYTYQANMLLLEGALPNQIDSALESFGMSMGPFR 525
>gi|254251314|ref|ZP_04944632.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124893923|gb|EAY67803.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 710
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/530 (36%), Positives = 286/530 (53%), Gaps = 16/530 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G
Sbjct: 14 VTRERRGD-VLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLVVGAGRNFIAGA 72
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P V L V IE KP+V A+ G LGGGLE+A+ H R
Sbjct: 73 DIREFGK----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYR 122
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+A P +LGLPE+TLG++PG GGTQR PRL+G A+++ML + +++E LGL+D +
Sbjct: 123 LALPGAKLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASADEALALGLVDRI 182
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
S++ L +A ++ + P R+ D L + A+ + AR + K + +
Sbjct: 183 AQSDDTLAEGLAYAHELVSLDAPPRRT-RDADGLSDRAAAQAAIDAARAELPKKSRGLFS 241
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+D IE + +G+ E +F + V GLVH FFA+R +KVP
Sbjct: 242 PAKIVDAIEAALTQPFDAGMKLERSLFLQCVDSPQRAGLVHAFFAEREAAKVPEARRASA 301
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+P V ++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G+
Sbjct: 302 RP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGR 359
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+T L+ L G Y D+VIEAV E + +K+ +F+EL + C P +LATNT
Sbjct: 360 MTPAARAARLERLTGSTSYDALAQADVVIEAVFEDMTVKKAVFAELARVCKPRAMLATNT 419
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + +IG HFFSPAHVM LLEIV R A+V+ + K +KK P
Sbjct: 420 SYLDIDELAASIDRPADVIGLHFFSPAHVMKLLEIVVPARVDAEVVATAFALAKQLKKTP 479
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V G C GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 480 VRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|94314029|ref|YP_587238.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|93357881|gb|ABF11969.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
Length = 715
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 275/522 (52%), Gaps = 12/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVN L AGL A V +VL G G F GG DI F
Sbjct: 22 IAVLWLDNPPVNGLGDSTRAGLHAGITRALQDATVAGVVLAGAGKAFCGGADIRQF-NTP 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LIE KP+VAA+ G+ALGGGLELAMGCH R+ A LGLP
Sbjct: 81 AATARPLTRDV-----LALIESASKPVVAAIHGVALGGGLELAMGCHYRVVASDASLGLP 135
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--LLKV 192
E+ LG++PG GGTQRLPRLVG+ +A++M+ S++ E ++GL DAV +
Sbjct: 136 EVNLGLVPGGGGTQRLPRLVGVEQALDMVQQGASVSGEAAARIGLADAVADARPSGTRDA 195
Query: 193 SRLWALDIAARRKPWIRSL-HRTDKLGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDV 250
+ AL I R R++ H ++ + +V AR+ A A N AC+
Sbjct: 196 GPVVALAIDFCRSAAARAVAHPVASALAVKASGDVDFGARIAAINGKARNALAQNACIRC 255
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+E G+ E F+ LV + S+ L H+FFA+R K + L+P + +
Sbjct: 256 VEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKFAEGKGLALRP--IER 313
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VAVIG G MG GIA + + I V+L E L +G+ I N +GKL + +
Sbjct: 314 VAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGMALIRRNYEITAAKGKLAPQQID 373
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + L + D D+V+EAV E + +KQ IF L+ C P ILATNTS ++++
Sbjct: 374 ACMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPSAILATNTSRLNIDT 433
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T +IG HFFSPA+VM LLE+VR + T A VI M + + I+K+PV+V C
Sbjct: 434 IAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATRADVIASCMAMAQRIRKIPVLVRVCE 493
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR PY + A L+ G ++D A+ FG+ +GP
Sbjct: 494 GFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPL 535
>gi|452964617|gb|EME69653.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum sp. SO-1]
Length = 703
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 284/528 (53%), Gaps = 19/528 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ V D +A +T+ +PPVNA P+ AGL+ F + R D A V+ G F G
Sbjct: 5 VTLSV-TDRIATVTIDSPPVNAADHPVRAGLQKVFTDLAGRADYDAAVVVCAGRTFMAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F D + P +L NL+E C KP+VAA+ G ALG G ELAM CH R+A
Sbjct: 64 DIGEF-------DTGIKPPHHQDLF-NLVESCAKPVVAALHGTALGAGTELAMACHYRVA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPEL+LG+IPG GGTQR PRL+GL A++++L K + + + +LGL+D V
Sbjct: 116 DKGARIGLPELSLGIIPGAGGTQRAPRLIGLDAAMDLVLSGKPVPAAKALELGLVDEVAA 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++ +A + P RT L A+ +A QA+ A M
Sbjct: 176 ADVNAAALAYAKKLVAEGKGP-----RRTCDLAVKDAAKAAEIIAARQAQ-VAKTMKNRT 229
Query: 246 ACLDVIEEGIVHGGY---SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+ L ++E G+ EA + ++L +R + H+FFA R K+P +T
Sbjct: 230 SPLKLVEAMAAAASLPFAEGLKLEADISRQLEHAVEARAMRHLFFADREVRKIPGITK-D 288
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+K R +RKV +IG G MG GIA + V + +V+ E L +G+ I N V+RG
Sbjct: 289 IKARPIRKVGIIGAGTMGGGIAMCFANIGVPVTIIDVSDENLQRGLGIIRKNYERSVSRG 348
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT ++ + + +L DY+ KD D+ IEAV E + LK+ IF+ L+ P IL TN
Sbjct: 349 SLTAEQLESRMGLLSVSTDYAALKDADLAIEAVFEKMELKKDIFARLDAVLPAGAILGTN 408
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TST+D++ + T +IG HFFSPA+VMPLLEIV+ +TS V+L + + K+IKK
Sbjct: 409 TSTLDIDEIAATTKRPADVIGLHFFSPANVMPLLEIVQGAKTSMDVLLTALDMAKLIKKT 468
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
VV C GF NR PY + A +V G ID A+ +G+ +G
Sbjct: 469 GVVSKVCYGFIGNRMMDPYGREAERMVLEGATPADIDGALEGWGMAMG 516
>gi|94497668|ref|ZP_01304236.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
gi|94422885|gb|EAT07918.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
Length = 689
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 278/525 (52%), Gaps = 17/525 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ + GL+ + E+A S V+AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSASLRQGLQAELEQAFSDKAVRAIILLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++D KP+VAA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 ---PWQPPSLPDLCA-----MLDDAPKPVVAAIHGTALGGGFELALACHYRVAAQSARVG 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR+PR+VG A+E++ + I + E LGL+D VV L
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGAETALEIITSGRQIKAAEALSLGLVDTVVEDAALRHN 182
Query: 193 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +A I A KP +R R D L + + E+ + A ++
Sbjct: 183 ALAFAHRIVAHGSDKPRVRD--RADALSADRDRPELFTAFAAANARRFKGFVAPAAIIEA 240
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV-- 308
++ + G+ KE +F+ L+ S HVFFA+R ++VP DIG +
Sbjct: 241 VKAAVTLPFEQGLAKETDLFERLIASPESAAQRHVFFAEREAARVP---DIGPDTVAIDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R V VIG G MG GI + I V L E + E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPVTLLETSQEALDRGIATIRRNYEATAVKGRMTAAQ 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ ++ LD S D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMDLIAPSLDLSSLTDADLIIEAVYESMDVKTGIFASLDRIARQGTILASNTSFLDL 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NCIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAETSKAVVATAMRLAKRIGKVAVLSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR P A ++ + ID + +G +G FQ
Sbjct: 478 CDGFIANRLMAPRGAQAEAMMLEDTPIAEIDRVLVDYGFAMGHFQ 522
>gi|346991676|ref|ZP_08859748.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ruegeria sp. TW15]
Length = 697
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 287/523 (54%), Gaps = 26/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+++ NPPVNAL + GL E A + D V+A+++ G G + G DI F K
Sbjct: 13 IAVLSANNPPVNALGAEVRQGLLAGIERAEA-DGVQAVLIYGEGRTYFAGADIREFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D + + + IE +V+++ G ALGGGLE+A+ CH RIA P T++GLP
Sbjct: 72 --------QDPWLPALCDRIEASPLMVVSSLHGTALGGGLEVALSCHYRIATPLTKVGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE----LL 190
E+ LG+IPG GGTQRLPR+ G+ A+EM+ + + + E ++G++D V + L
Sbjct: 124 EVNLGIIPGAGGTQRLPRVAGVEAALEMITTGRHVQASEALQMGVLDKVQDGDPREIGLA 183
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
V L L+ A R+P + + + + + VLK R Q +C
Sbjct: 184 FVRDL--LETGAPRRP-VCEMAKPTPIDFDATYDAVLKKGRGQLSPAIAVRAVQASCE-- 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
H +G +E ++F EL+ D +GL+H FFA+RA SK+P + G+ PR + +
Sbjct: 239 -----AHDFAAGQARERELFTELMASDQRKGLIHAFFAERAVSKLPELQ--GINPRELHQ 291
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ V+GGG MG+GIAT+ +L + VVL E++ + I AN+ G V RGKL+ D
Sbjct: 292 IGVVGGGTMGAGIATSALLAGLTVVLLEMSVDAAKAAKDRIAANLAGAVKRGKLSPDAQE 351
Query: 371 NALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L+ + DY VD+VIEAV E + +K+++F++L+ C +LATNTS +DLN
Sbjct: 352 EILENRITLSTDYDGLSGVDLVIEAVFEDMEIKKQVFAKLDATCKSGAVLATNTSYLDLN 411
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T +IG HFFSPAHVM LLEIV + T+ +VI +GK + KV V G C
Sbjct: 412 EIAASTGRPSDVIGLHFFSPAHVMKLLEIVVADHTAPEVIATGFALGKRLGKVSVRAGVC 471
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y A +V G F+ID+A+ FG +GPF
Sbjct: 472 DGFIGNRILNAYRTCADHMVLDGASPFQIDAALTRFGFAMGPF 514
>gi|171322824|ref|ZP_02911545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
gi|171091819|gb|EDT37322.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
Length = 615
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 255/445 (57%), Gaps = 7/445 (1%)
Query: 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQR 149
++ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+ LPE+ LG++PG GGTQR
Sbjct: 1 MIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVALPEVKLGLLPGAGGTQR 60
Query: 150 LPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209
LPR VGL A+ M++ + SE+ GL DA+ + LL + +A + A++ P R
Sbjct: 61 LPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFARKVGAQKGPHPR 119
Query: 210 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 269
D+ A ++ AR A+ APN P C+D IE G+++G G + E +
Sbjct: 120 V---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREG 176
Query: 270 FKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHI 328
F L+M SR L H FF +RA SK+ +V D + R +R+V VIG G MG GIA +
Sbjct: 177 FVALMMTPESRALRHAFFGERAASKIADVPADTPV--REIRRVGVIGAGTMGGGIAMNFV 234
Query: 329 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388
+ V L E + L +G+ TI N V +GKLTQ K + + ++ L Y + KD
Sbjct: 235 NAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDA 294
Query: 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 448
D+++EAV E + +K+++F L+ P ILA+NTST+D++ + T ++G HFFS
Sbjct: 295 DLIVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFS 354
Query: 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 508
PA+VM LLE+VR T+ V+ +M V K I+K VV G C GF NR Y + A +
Sbjct: 355 PANVMKLLEVVRGAHTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFM 414
Query: 509 VSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ G ++D AI FG +GPF+
Sbjct: 415 LEEGALPAQVDRAIEKFGFAMGPFR 439
>gi|170694988|ref|ZP_02886137.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170140086|gb|EDT08265.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 697
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 285/530 (53%), Gaps = 23/530 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+G+A++T NPPVN+L+ L+D+ A +RDDV AI+LTG F GG +I F
Sbjct: 11 EGIAVVTFQNPPVNSLSALQRRSLQDQLRHAAARDDVSAIILTGGARPFCGGAEIREFNT 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDC---KKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
+S + LIE C KP++AA+ G A G GLELAM H RIA
Sbjct: 71 A---------AQLSSPTMPELIEGCDTLSKPLIAAIGGFAFGAGLELAMAMHYRIAGADA 121
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+T G +PG GGTQRLPRLV + A MML + + + GL+D + + +L
Sbjct: 122 KLGLPEVTFGFLPGAGGTQRLPRLVPMEHAARMMLSGSPVDAATAHRQGLVDRL-SDGDL 180
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A + A P L RT +L + +L+ + H+ L
Sbjct: 181 FDDALSFARQLVAEGAP----LRRTSQLRVRMDTAPADLFDQLRDDINKRYL-SHKGKLH 235
Query: 250 VIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
+++ + S G E F EL+ S+ L + FFA+R +K+ +V+ ++PR
Sbjct: 236 IVDCCVAATKLSFEEGRQFERARFLELLETPESKALRYNFFAERNAAKIADVS-ADVRPR 294
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+R A++G G MG+GIA I V L + ++E L +G+ I V +G+++
Sbjct: 295 NIRTAAIVGAGTMGAGIAVCFANAGIRVALIDASTEGLERGMSIIRGVFDADVVKGRISA 354
Query: 367 DKANNALKMLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D+ + L + + S DVD+V+EA E + +KQ+IF EL++ PPH ILATNTS
Sbjct: 355 DERDRRLAFVAPTVSLPSAVSDVDLVVEAAFEQLDIKQQIFRELDRLAPPHAILATNTSM 414
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + TS ++G HFFSPAHVM LLE+VR TS +V++ +M + + ++K V+
Sbjct: 415 LDIDAIAAVTSRPQDVVGMHFFSPAHVMRLLEVVRCRMTSDEVLITVMQIARKLRKTAVM 474
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y Q A L+ G V +IDSA+ FG+ +GPF G
Sbjct: 475 SRVCDGFIGNRMLQRYLQQALFLLDEGCTVEQIDSAMERFGMAMGPFAVG 524
>gi|319764427|ref|YP_004128364.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|317118988|gb|ADV01477.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
Length = 705
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 294/523 (56%), Gaps = 15/523 (2%)
Query: 13 DG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG V ++T+ NPPVNAL + AGL++ E+ +A+++ G G F G DI F
Sbjct: 15 DGEVLVVTIDNPPVNALRQAVRAGLQEAVEQLEQDAASRAMLIVGQGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +P+V +N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 KPPMA---PFLPEV-----LNRMEAGGKLVVAAIHGPALGGGLEVAMATHYRLALPGAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A E+ML K ++++ GL+D +V ++ +
Sbjct: 127 GLPEVNLGLLPGAGGTQRSPRLMGALPAAELMLSGKHLSAKAALAAGLVDKLVEGDDPVA 186
Query: 192 VSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ ++ A+ +P R + + + +LA+ AKKT + ++
Sbjct: 187 AGLAYVRELLASGTQP--RRTCDLEVADKAAALAALDQLAQDTAKKTR-GLFSPAKIIEC 243
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + GV +E ++F E + GLVH FFA+R T+K+P PR K
Sbjct: 244 VKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAK--AAAPRHFAK 301
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+A+IGGG MG+GI A + + VV+ E ++E + +G K +E GL+ +G++T +
Sbjct: 302 LAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKA 361
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C +LATNTS +D++
Sbjct: 362 ATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDA 421
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS +IG HFFSPA++M LLEIV + + V++ + K +KKVPV G C
Sbjct: 422 IAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCD 481
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y ++A ++ G + ID+A+R FG P+GPFQ
Sbjct: 482 GFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQ 524
>gi|424864444|ref|ZP_18288347.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
gi|400759190|gb|EJP73372.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
Length = 715
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 300/526 (57%), Gaps = 21/526 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ- 71
D VA++T+ NPPVN L+ + GL + E+A + D V +V+TGNG F G DI+ F
Sbjct: 11 DNVAVLTVDNPPVNPLSEGVRNGLYEGMEKALTDDSVIGVVITGNGRAFIAGADISEFGG 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K G S+ V N IE KP+VAA+ GLALGGGLE A+ C+ RIA+P +
Sbjct: 71 KPEGH---------SLNDVFNKIETSVKPVVAAMNGLALGGGLETALVCNYRIASPSAFV 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRLVG ++A++MM+ I + + KLG++D +
Sbjct: 122 GLPEVNLGLLPGAGGTQRLPRLVGPAEAMKMMITGSHIPANKALKLGVVDDLSDDVVKSS 181
Query: 192 VSRLWALDIAARRKPWIRSLHRT--DKLGSLSEAREVLKLA-RLQAKKTAPNMPQHQACL 248
+ + ++ + P IR++ + + G+ E+ + A +++ + AP +
Sbjct: 182 IEFIQSVK-NVQNHPQIRNIDKNIIEFRGNDDVFNEMKQFAAKIRKGQFAPGQ-----II 235
Query: 249 DVIEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+E + + +G+ KE ++F E +M ++H+FF +RA +K+ +V K
Sbjct: 236 KCVESAVNETDFDNGLKKEGELFLECLMHPQREAMIHIFFGERAAAKIDDVPRETQKQE- 294
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
++K AVIG G MG GIA I V + + + + L +GI I N +V RG+L +
Sbjct: 295 IKKAAVIGSGTMGGGIAMCFANAGIPVHILDQDEDNLKRGIGVINKNYEMMVERGRLKPE 354
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
++ L+Y + DVD+V+EAV E++ LK+KIF +L++ P ILATNTS +D
Sbjct: 355 AKEFVTGLITSSLNYDDIHDVDIVVEAVYENIDLKKKIFEQLDEVTKPETILATNTSGLD 414
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++++G HFFSPA++M LLE+VR +S + + +M +GK +KK VV
Sbjct: 415 VDGIASVTKRPEKVVGTHFFSPANIMRLLEVVRGNESSNETLATIMDLGKKLKKASVVSL 474
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
N GF NR F YS A +L+ G ID A+ +FG+ +GPF+
Sbjct: 475 NAPGFIGNRMLFGYSNQANMLLLEGALPHEIDGALEAFGMNMGPFR 520
>gi|330826648|ref|YP_004389951.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|329312020|gb|AEB86435.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 705
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 294/523 (56%), Gaps = 15/523 (2%)
Query: 13 DG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG V ++T+ NPPVNAL + AGL++ E+ +A+++ G G F G DI F
Sbjct: 15 DGEVLVVTIDNPPVNALRQAVRAGLQEAVEQLEQDAASRAMLIVGQGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +P+V +N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 KPPMA---PFLPEV-----LNRMEAGGKLVVAAIHGPALGGGLEVAMATHYRLALPGAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A E+ML K ++++ GL+D +V ++ +
Sbjct: 127 GLPEVNLGLLPGAGGTQRSPRLMGALPAAELMLSGKHLSAKAALAAGLVDKLVEGDDPVA 186
Query: 192 VSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ ++ A+ +P R + + + +LA+ AKKT + ++
Sbjct: 187 AGLAYVRELLASGTQP--RRTCDLEVADKAAALAALDQLAQDTAKKTR-GLFSPAKIIEC 243
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ + GV +E ++F E + GLVH FFA+R T+K+P PR K
Sbjct: 244 VKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAR--AAAPRHFAK 301
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+A+IGGG MG+GI A + + VV+ E ++E + +G K +E GL+ +G++T +
Sbjct: 302 LAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKA 361
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C +LATNTS +D++
Sbjct: 362 ATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDA 421
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS +IG HFFSPA++M LLEIV + + V++ + K +KKVPV G C
Sbjct: 422 IAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCD 481
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y ++A ++ G + ID+A+R FG P+GPFQ
Sbjct: 482 GFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQ 524
>gi|163761199|ref|ZP_02168275.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
gi|162281538|gb|EDQ31833.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
Length = 694
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 288/522 (55%), Gaps = 22/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLK---DKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
VA+IT+ NPPVNAL + + GL D+F E DD + ++ G G F GG DI+ F
Sbjct: 13 VAVITVANPPVNALGLAVRQGLWQAIDRFAE----DDAEIALIVGEGRLFIGGADISEFG 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV IE KP+VAAV G ALGGG E+A+G H R+A Q
Sbjct: 69 KPPVE---PYLPDVCTH-----IERSTKPVVAAVHGPALGGGCEVALGAHYRLAIKGAQF 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LG+IPG GG+QR+PRL G+ A+EMM S+T++E ++GL+D V + +
Sbjct: 121 GFPEVKLGLIPGAGGSQRMPRLTGVGPALEMMPAGGSVTADEALEIGLVDRVAEGDAR-E 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A ++ P +R++ + +A L KK+ + +A +D I
Sbjct: 180 AGLAYARELLESGAP-VRAVGTLPR--PADDAAAFDAARALWQKKSRGEVAPLRA-IDAI 235
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E GV +E ++F EL+ GL+H FF R +K+P + G+ PR + V
Sbjct: 236 EAATKMDLDEGVREERRIFLELMETPQRAGLIHAFFNDRKVAKLPEIE--GIAPRNMAHV 293
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MG+GIATA +L+ + V L E ++ K TI AN+ V RGKL D+ +
Sbjct: 294 GVIGGGTMGAGIATACLLSGLSVTLIERDAAAADKARGTITANLDAAVKRGKLPADRRDA 353
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L L V DY+E D D+ IEAV E + +K ++F+ L+ P ILATNTS +D+N +
Sbjct: 354 TLSQLSTVTDYAELSDCDLAIEAVFEDMAVKHEVFARLDAVMKPGAILATNTSYLDVNEI 413
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPAHVM LLE+V + T+A V + K + K+ V G C G
Sbjct: 414 AAATRRPSDVIGLHFFSPAHVMKLLEVVVADATAADVTATAFALAKRLGKIAVRAGVCDG 473
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G + ID+AI++FGLP+GPF+
Sbjct: 474 FIGNRMLATYRGAADRMILDGASPWEIDAAIKAFGLPMGPFE 515
>gi|398846806|ref|ZP_10603760.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398252208|gb|EJN37411.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 701
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 290/527 (55%), Gaps = 28/527 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L + PVNAL + L +A + +V+AI+L G FS G DI+ F
Sbjct: 13 LALIGLCHAPVNALGHDLRQALMQACSQAAADPEVQAIILHGQQLPFSAGADISEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + ++ ++ + KP++AA++G+ALGGGLELA+ C R+A +LGLP
Sbjct: 69 --GSPRTWEEPALPELLEALTRIDKPLIAAIDGVALGGGLELALACSHRLATAHARLGLP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193
E+ LG++PG GGTQRLPRLVG+ A++MML I + +G LGLID + +++L+++
Sbjct: 127 EVRLGLLPGAGGTQRLPRLVGVEPALDMMLSGDPIDARQGLALGLIDRLPEPGQDMLELA 186
Query: 194 RLWALDIAAR-RKPWIRSLHRTDKLGS-LSEAREVLKLARLQAKKTAPNMPQH------Q 245
+A D+ A+ P + D L S +RE A+L A+K P
Sbjct: 187 CAFARDLLAQPTAPAATPIPLADGLASDFFASRE----AQLVARKPGQRAPLRVLAAVRA 242
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC + EG+ +E +F+E + + L H FFA+R +VP + D
Sbjct: 243 ACELPLAEGLA--------QEQALFREALQDPQATALRHQFFAEREALRVPGI-DANTTL 293
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + VAVIG G MG+GIA I I V L E+ E L +G+ I N + RGKLT
Sbjct: 294 RNIANVAVIGAGTMGAGIAMNFINAGIPVRLLELKPEALDRGLAQIRKNYESSIKRGKLT 353
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + +L+G LDY++ D D+VIEAV E + +KQ++F L++ C P ILA+NTST
Sbjct: 354 PEQLEQRMSLLQGTLDYADLADADLVIEAVFEDLSIKQQVFRTLDRVCKPGAILASNTST 413
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + T ++G HFFSPA+VM LLE+VR T+ V+ + + K I K+PVV
Sbjct: 414 LDVDRIAGCTQRPQDVVGLHFFSPANVMRLLEVVRGRATAPDVLATTLKIAKRIGKLPVV 473
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR PY + A LV G ++D + GL +G F
Sbjct: 474 SGVCFGFIGNRMLEPYGREAHRLVLEGASPAQVDKVLTGLGLAMGVF 520
>gi|16127419|ref|NP_421983.1| fatty oxidation complex subunit alpha [Caulobacter crescentus CB15]
gi|13424863|gb|AAK25151.1| fatty oxidation complex, alpha subunit [Caulobacter crescentus
CB15]
Length = 692
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/533 (36%), Positives = 295/533 (55%), Gaps = 10/533 (1%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G + ++TL +PPVNAL+ + GL+ F+ A + VKAIVL +G
Sbjct: 1 MAAINAVTDFSVEGDIGVVTLNSPPVNALSAAVREGLQGAFDAAIADAAVKAIVLICDGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N+IE+ KP++AA+ G ALGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQNVIENSPKPVIAAIHGTALGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
+ R+A P + GLPE+ +G++PG GGTQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 ANYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTTGQHVPAKAAHAMGL 172
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
D +V +L + + +A + A +P + +K+ + E+ + R K
Sbjct: 173 FDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAARGKPEIFEAFRKANAKKFR 232
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ + IE + G+ E K+F EL+ S +VFFA+R +K+P+V
Sbjct: 233 GFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 292
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 293 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGIIRKNYENTA 351
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 352 KKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEIKKEVFTKLDKIAKPGAIL 411
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D++ + TS + +IG HFFSPA+VM LLE+VR ++TS VI M + K I
Sbjct: 412 ATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKDVIATCMKLSKTI 471
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
KVPV+VG C GF NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 472 GKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 524
>gi|393775492|ref|ZP_10363805.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392717542|gb|EIZ05103.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 702
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/522 (37%), Positives = 285/522 (54%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV ++TL PPVNAL + L E A + V+AIVL G G FS G DI F
Sbjct: 11 QDGVLVLTLNQPPVNALGNTLRKALVQAIETAQADPQVRAIVLHGAGRGFSAGADITEF- 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P V V +IE+C KP++AA+ G+ALGGGLELA+G H RIAA T+L
Sbjct: 70 -----GQPREFPWVGD--VCTIIENCDKPVIAALHGMALGGGLELALGAHYRIAARGTKL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ +G+IPG GGTQRLPRL+G + A+++ML + + +E ++GLID + T ++ L+
Sbjct: 123 GLPEVQIGLIPGGGGTQRLPRLIGAAAALDLMLSGRHASVDEAKRMGLIDRIATQDDPLE 182
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ WA +I A+ +R LG + + ++ AR + A + LD +
Sbjct: 183 EACTWASEILAQ-GGIVRRTRDAQALGDSATSLAAVEAARAGNARKARGLFAPFQILDAV 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
++ I +G+ E F + V GLVH FFA+R K P +PR V V
Sbjct: 242 KDAIEQPFEAGIQAERARFLQCVDSPQRAGLVHAFFAERRVRKAPETE--SSQPRPVATV 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MGSGIA A + + V++ E + L G + +E L+ G++ +
Sbjct: 300 GVIGGGTMGSGIAVALLDAGLQVIMVERDDASLQAGRQRVEKVYDRLIANGRMEVARKEA 359
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ G Y F D+VIEAV E + +K+ +F EL++ C P ILATNTS +D++ +
Sbjct: 360 VLQRFTGATSYDAFAQADLVIEAVFEDMDVKKAVFGELDRICKPGAILATNTSYLDIDAI 419
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
S +IG HFFSPA++M LLEIV + SA V+ + ++KVPV G C G
Sbjct: 420 AASISRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATGFALADKLRKVPVRAGICDG 479
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR + Y + A ++ G + ID A+ FG +GPF+
Sbjct: 480 FIGNRILYVYREVASHMMEDGASPYEIDQALEEFGYAMGPFR 521
>gi|221236228|ref|YP_002518665.1| multifunctional enoyl-CoA
hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
gi|220965401|gb|ACL96757.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
Length = 696
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/533 (36%), Positives = 295/533 (55%), Gaps = 10/533 (1%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G + ++TL +PPVNAL+ + GL+ F+ A + VKAIVL +G
Sbjct: 5 MAAINAVTDFSVEGDIGVVTLNSPPVNALSAAVREGLQGAFDAAIADAAVKAIVLICDGK 64
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N+IE+ KP++AA+ G ALGGGLE+A+
Sbjct: 65 TFIAGADITEFGKA--------MTGPSLQDVQNVIENSPKPVIAAIHGTALGGGLEVALV 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
+ R+A P + GLPE+ +G++PG GGTQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 117 ANYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTTGQHVPAKAAHAMGL 176
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239
D +V +L + + +A + A +P + +K+ + E+ + R K
Sbjct: 177 FDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAARGKPEIFEAFRKANAKKFR 236
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ + IE + G+ E K+F EL+ S +VFFA+R +K+P+V
Sbjct: 237 GFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 296
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 297 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGIIRKNYENTA 355
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 356 KKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEIKKEVFTKLDKIAKPGAIL 415
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D++ + TS + +IG HFFSPA+VM LLE+VR ++TS VI M + K I
Sbjct: 416 ATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKDVIATCMKLSKTI 475
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
KVPV+VG C GF NR + A+ L+ G + +D + FGLP+GPF
Sbjct: 476 GKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPF 528
>gi|424863887|ref|ZP_18287799.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
gi|400757208|gb|EJP71420.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
Length = 717
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/528 (37%), Positives = 307/528 (58%), Gaps = 24/528 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA++T+ NPPVN L+ + GL + +A D +K IV+TGNG F G DI+ F
Sbjct: 11 DNVAVLTVDNPPVNPLSDGVRTGLYECVTKAEEDDSIKGIVVTGNGRAFIAGADISEF-- 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G+V +S+ V N +E C KP+VAA+ G+ALGGGLE A+ C+ RIAA +G
Sbjct: 69 ---GGNVE---GISLNEVFNKLEHCSKPVVAAINGIALGGGLETALCCNYRIAANTAFVG 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPRL G S+A++MML I +++ +G++D++ SE +++
Sbjct: 123 LPEVNLGLLPGGGGTQRLPRLAGPSEALKMMLTGGHIPAKKALDMGIVDSI--SENVVED 180
Query: 193 SRLWALDIA--ARRKPWIRSLHRTDKLGSLSEAR---EVLKLARLQAKKTAPNMPQHQAC 247
S +A++ A + + P +R L+ + EAR ++L A+ A K
Sbjct: 181 SIKFAIEKAESSEQHPKVRDLNE-----KMIEARGNDKILLEAQAMAAKGRKGQFAPGQI 235
Query: 248 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKP 305
+ +E I + G+ KE ++F E ++ ++H+FF +RA SK+ +V D +K
Sbjct: 236 IKCVEAAINLDDFDEGLKKEGELFLECLLHPQREAMIHIFFGERAASKISDVPKDTPVKE 295
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
++K +IG G MG GIA I V + + + E L +G+ IE N +V +G+LT
Sbjct: 296 --IKKAGIIGSGTMGGGIAMCFANAGIPVHIIDQDEENLKRGVSVIEKNYDFMVGKGRLT 353
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + ++ L+Y + D D+VIEAV E++ LK +IF L+ P ILA+NTS
Sbjct: 354 SEQKDAVFGLVTSSLEYEDISDCDIVIEAVYENLELKHEIFKTLDSVVKPEAILASNTSG 413
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + T + ++G HFFSPA++M LLE+VR E TS + + +M VGK +KK VV
Sbjct: 414 LDIDSIAAVTKRPELVVGTHFFSPANIMRLLEVVRGEVTSDETLATVMAVGKKLKKAAVV 473
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
N GF NR F Y+ A +L+ G +ID A+ SFGL +GPF+
Sbjct: 474 SLNAPGFIGNRMLFGYTAQANMLLLEGALPHQIDQALESFGLNMGPFR 521
>gi|127513792|ref|YP_001094989.1| 3-hydroxyacyl-CoA dehydrogenase [Shewanella loihica PV-4]
gi|126639087|gb|ABO24730.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella loihica PV-4]
Length = 708
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 283/517 (54%), Gaps = 9/517 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
A+I L PPVN+L + + L + A + + V AIVL +G F GG DI+ F
Sbjct: 13 TAVIILNQPPVNSLGLALRTHLLADLKRAEADESVDAIVLASSGKLFCGGADISEFS--- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ D P++ V + +E K +VAAV GLALGGG EL + C RIA P +LGLP
Sbjct: 70 -SDDALAEPNLPQ--VCDALEASPKLVVAAVNGLALGGGCELTLACDYRIALPAAKLGLP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 193
E+ LG++PG GGTQRLPR+ G+ A+EM+ + + + G+ID + ++ +
Sbjct: 127 EVNLGILPGAGGTQRLPRIGGVQLALEMITSGRPLGAAAMLDAGVIDNLYQDGGNFIQAA 186
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A ++ A+ KP + ++S E+ R + + + C+ +E
Sbjct: 187 VDFAQELVAQHKPKRSCFEMSVDTSNISS--EIFNEFRAAIARRSRGYYAPERCIQAVEA 244
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
G+ +E ++F E + +R H+FFA+R +K+P + R +RKVAV
Sbjct: 245 ACELPLAEGLKREHQLFMECLDTPQARAQQHLFFAERGVAKIPGINPKTTATREIRKVAV 304
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA I I + ++N E L +G+ I N + +GKL+Q + + +
Sbjct: 305 IGSGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKKGKLSQAQLDERM 364
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L G DY++ DVD+VIEAV E + +K+++F L+ C P ILATNTST+D++ +
Sbjct: 365 ALLSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILATNTSTLDVDEIAA 424
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
+TS ++G HFFSPA+VM LLEIVR +T+ +L + + + IKKVPVV G C GF
Sbjct: 425 ETSRPQDVLGLHFFSPANVMRLLEIVRANKTAPDALLTTVQLAQRIKKVPVVSGVCWGFI 484
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
NRA Y + + L+ G +ID FG+P+G
Sbjct: 485 GNRATDSYLRESMSLILEGASPAQIDKVHTEFGMPMG 521
>gi|409404906|ref|ZP_11253379.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
gi|386435673|gb|EIJ48497.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
Length = 713
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 281/530 (53%), Gaps = 34/530 (6%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ N PVNAL + + GL EE + V AI++TG G F GG DI F K A
Sbjct: 24 VVTIDNAPVNALGVAVRRGLLAAIEEGEADAGVAAILVTGAGRNFIGGADIREFGKPPQA 83
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
L+ ++ N IE C KP++AA+ G ALGGGLE+A+ H R+A +LGLPE+
Sbjct: 84 ---PLLTEL-----CNRIEACSKPVLAAIHGAALGGGLEVALAAHYRLALANARLGLPEV 135
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
LG++PG GGTQR PRL+G A+E ML + + ++E LGL+D + E
Sbjct: 136 QLGLLPGAGGTQRTPRLIGAQAALETMLSGRHLGAKEALGLGLVDHLAEGE--------- 186
Query: 197 ALDIAARRKPWIRSLHRTDKLGS-LSEARE------------VLKLARLQAKKTAPNMPQ 243
D A R +R L +G+ + +R+ + AR + K + +
Sbjct: 187 --DAAQARAAGLRELQTLLDMGAPVRRSRDGSALADSAAAQAAISAARAETGKKSRGLFS 244
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+D +E G+ E + F + + GL+H FFA+R K P +
Sbjct: 245 PHKIIDAVEAATTLPFDQGLALERQFFLQCLDSPQRAGLIHAFFAEREVQKAPETRNA-- 302
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+PR + ++ V+GGG MG+GIA A + + V + E + E L +G +E V +G+
Sbjct: 303 QPRPIARIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDEALARGRGHVEKVYDAQVAKGR 362
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LTQ+ + L L G Y + D+VIEAV E + +KQ +F+EL++ C P +LATNT
Sbjct: 363 LTQEARDAVLARLHGSTRYEDLSAADVVIEAVFEDLNVKQAVFAELDRVCKPGAVLATNT 422
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + S +IG HFFSPA+VM LLEIV + +A V+ + K ++KVP
Sbjct: 423 SYLDIDAIAASISRPADVIGLHFFSPANVMKLLEIVVPRQVAADVVATAFELAKRLRKVP 482
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V G C GF NR Y Q+A L+ G + ID+A+R FG +GP+Q
Sbjct: 483 VRAGVCDGFIGNRILAVYRQAADALMEDGASPYEIDAAVRDFGFAMGPYQ 532
>gi|170734224|ref|YP_001766171.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169817466|gb|ACA92049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 708
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 279/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRIAHSDDT 186
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 246 AVEAALTQSFDAGMKLERNLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SPRPVE 303
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R S V+ + K +KK PV G C
Sbjct: 424 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALAKQLKKTPVRAGVC 483
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 484 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQ 527
>gi|358637346|dbj|BAL24643.1| 3-hydroxyacyl-CoA dehydrogenase [Azoarcus sp. KH32C]
Length = 672
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 281/523 (53%), Gaps = 24/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ T+ NPPVNAL++ + GL + + + D V+A+V+ G G F G DIN F K +
Sbjct: 12 IAVATVNNPPVNALSLGVRQGLMQAIDASHADDSVRALVIIGGGSTFVAGADINDFGKPY 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ S+ +++ + KP++AA+ G A GGGLELA+ C RIA+P Q+G P
Sbjct: 72 --------EEPSLYAIIDALMASPKPVIAAIHGTAFGGGLELALACQWRIASPDAQIGQP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQ PRL G + A+E+ + + + + G+ID + + LL+ +
Sbjct: 124 EVKLGLMPGGGGTQWWPRLAGPAVALEVATSGNPVAARQAHEWGVIDRIADGK-LLEDAL 182
Query: 195 LWALDIAARRKPWIRSLHRTDKLGS-----LSEAREVLKLARLQAKKTAPNMPQHQACLD 249
A D+ + P R TDK+ E R+ K AR + AP +D
Sbjct: 183 AMAQDVVSGALPARRLSESTDKIRDVDPALFDEFRK--KNARKWKGQLAP-----WKIVD 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E G E F+E SR L+H+FFA+RA K+ +VT P V
Sbjct: 236 CVEAACRLSFDEGFRMEKDAFRECEHSHQSRALIHLFFAERAAGKLSDVT---AAPMPVA 292
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ V+G G MG+GIA + + V L + + E L +G+KTI N V+RG + Q +A
Sbjct: 293 SIGVVGAGTMGAGIAMSFANAGLPVTLLDTSEEGLARGMKTITGNYATSVSRGSMPQARA 352
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ AL + D + + D+++EAV E + +KQ +F L+ P ILATNTST+D++
Sbjct: 353 DAALARITATTDDAALAEADLIVEAVFEDMAIKQSVFRRLDAVAKPGAILATNTSTLDVD 412
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ TS + ++G HFFSPA+VM LLE+VR RT A + M V + ++K+ VV GN
Sbjct: 413 AIAAVTSRPESVLGLHFFSPANVMRLLEVVRGPRTGAATLATAMAVARKLRKIAVVSGNA 472
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y + A L+ G ++ID + FG P+G F
Sbjct: 473 YGFIGNRILAAYGREADFLLEEGATPWQIDRVLTEFGFPMGLF 515
>gi|323526726|ref|YP_004228879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383728|gb|ADX55819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 706
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 284/524 (54%), Gaps = 21/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADSERAVEAVLLVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G + A+++ML + +++E LGL+D + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAAAALDLMLSGRHASAKEALALGLVDRLGASGDILAE 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 249
+A + A + RT +LS+ + + AR + +K + + +D
Sbjct: 188 GLAYAHALLAAHA----TARRTRDAAALSDRAASLAAVVAARTETEKKSRGLFSPLKIVD 243
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + G+ E ++F + + GLVH FFA+R K P D KPR +
Sbjct: 244 AVEAAVTQPFEEGLRVERQLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRALA 301
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++ +K
Sbjct: 302 AIGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAEKK 361
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y + D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++
Sbjct: 362 AELMARWTGSTSYEALANADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDID 421
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S +IG HFFSPA++M LLE+V SA V+ + K ++K PV G C
Sbjct: 422 AIAAGISRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAGVC 481
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 482 DGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|330808852|ref|YP_004353314.1| multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376960|gb|AEA68310.1| putative multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 703
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 284/523 (54%), Gaps = 20/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVNAL + + D A + V IVL G G F G DI F K
Sbjct: 15 VAVITVNNPPVNALTPGMRGSIIDAVAHANADPAVAVIVLMGAGQNFIAGADIRQFGKAR 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
++ + ++ KP VAA+ G ALGGGLE A+ CH RIA +LGLP
Sbjct: 75 ---------TITTRMSAAALDASAKPTVAAIHGYALGGGLEHALACHYRIALSAAKLGLP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLK 191
E+ LG+IPG GGTQRLPRLVG + A ++++ S+ + + E K+GLI +V S+EL
Sbjct: 126 EVALGLIPGGGGTQRLPRLVGAAVATDLLVSSRHVQAPEALKIGLISQIVPGTQSQELRD 185
Query: 192 VSRLWALDIAARRKPWIRSL--HRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A +A + +R L D + +VL+ AR A K + + Q +D
Sbjct: 186 AAVSYAKAVAHAQPQRVRDLVLEPMD-----ATTMDVLQAARRAAAKKSAHNKAPQYAID 240
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
IE + E+++F EL D ++ L + FFA+R +KVP+ G KP GV
Sbjct: 241 CIEAAFSLPFDEALEVESRLFSELEGSDVAKALRYAFFAEREAAKVPDAPP-GFKPAGVT 299
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AVIG G MG+GIA I V L E ++E L +G++ I V RG++T +
Sbjct: 300 CAAVIGAGTMGAGIAICFADAGIVVKLLEASAEALDRGLQRIRDIYAAKVKRGRMTVQEM 359
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ L+ ++ V Y E D D+V+EAV E + LK+ +F++L+ P +L TN+S ID+N
Sbjct: 360 DACLQFVQPVCHYEEIGDCDVVVEAVFERIDLKKDVFTKLDAVMKPGALLLTNSSAIDIN 419
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
++ T + GAHFF+PA+ M L EIV+ ++TS + ++ M +G+ +KKV V G C
Sbjct: 420 VMANMTGRPQNVAGAHFFAPANAMKLCEIVKGDQTSIETVVRAMKMGRDLKKVCAVSGTC 479
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GFA NR+ P LL+ G +ID + FG P+GPF
Sbjct: 480 DGFAANRSRAPLVTEMMLLLEEGARPEQIDRVMVEFGYPMGPF 522
>gi|421483297|ref|ZP_15930874.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
gi|400198541|gb|EJO31500.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
Length = 707
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 281/522 (53%), Gaps = 10/522 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + +ITL +PPVNAL+ + L + A S V+AI+L G G F G DI F
Sbjct: 15 DDDILVITLDHPPVNALSADVRHDLAAAIQAAQSDPHVRAILLVGAGKNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP+VA + G ALGGGLE+A+ H R+A P +L
Sbjct: 75 K---PPKPPALPDV-----CNQIEASDKPVVAVLHGAALGGGLEVALAAHYRVALPGAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+++ML K +++E K GL+DA+ ++ L
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLIGARAALDLMLSGKHLSAEAALKAGLVDALGDGDDALA 186
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A RS TD L + A A Q KT + +D +
Sbjct: 187 AGLAYTRRLLAEGAGPRRSRDATDALADKAAALAEASAAGEQVAKTLRGLYSPAKIVDAV 246
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ E +F + + GLVH FFA+R T+K+P + +PR + K+
Sbjct: 247 RAAIEQPFDEGLRTERALFLQCLDSPQRAGLVHAFFAERETAKIPELK--AARPRRLEKI 304
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA + + + VV+ E + L +G + L +G++T D+ +
Sbjct: 305 GVVGGGTMGAGIAVSVLDAGLPVVMVEQDDAALERGRARVAQVYDLLQKKGRITADERDA 364
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ G Y D D++IEAV E + +K +F++L++ P +LATNTS +D+N +
Sbjct: 365 RMARFSGATTYDALGDADLIIEAVFEDMDVKLAVFAQLDRVAKPGAVLATNTSYLDVNRI 424
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA++M LLEIV E TSA+ + + + ++K PV G C G
Sbjct: 425 ASATRGPADVLGLHFFSPANIMKLLEIVVGEHTSAETVATGFELARRLRKTPVRAGVCDG 484
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR + Q+A +++ G + ID+A+R FG P+GP+Q
Sbjct: 485 FIGNRILAVHRQAADMMMEDGASPYDIDAAVREFGYPMGPYQ 526
>gi|332308240|ref|YP_004436091.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332175569|gb|AEE24823.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 705
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 287/520 (55%), Gaps = 15/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL N PVNAL+ + +G+ D A S D KAI++ GNG F G DI F +
Sbjct: 12 IGLLTLNNAPVNALSHSLRSGIVDALRMA-SLDQSKAIIIVGNGAMFCAGADIREFSQTP 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V IE+ +KP++AA+ G ALGGGLELA+ CH R A +LGLP
Sbjct: 71 QA--------PSLVDVTECIENMQKPVIAAIHGNALGGGLELALACHYRCALASAKLGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193
E+ LG++PG GGTQR PR++GL A ++ +E+ +GLID +V ++L+ +
Sbjct: 123 EVKLGILPGAGGTQRAPRIIGLEHAFTLITSGNPCKAEKALSIGLIDHLVEHDQDLVAAA 182
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+ +A + P RS ++ K A L + PQH +D +E+
Sbjct: 183 QKYAQQVLNEGLPIRRSSQSPIDKQNIDSDWFDKKRAELSKRARGQIAPQH--IVDCLEK 240
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVA 312
+ G+ E + F V + ++ + H+FFAQR +KV V+ D +P ++ VA
Sbjct: 241 ALNAEFVEGMQFEREAFLNCVTSEQAKAMRHLFFAQRLAAKVKEVSPDTSKRP--IKSVA 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IG G MG GIA I V L E+++E L KG++ IE N V++G+L++ +
Sbjct: 299 IIGAGTMGGGIAMNFANVGIPVTLLELSAESLTKGLQLIEKNYAISVSKGRLSESQKAQR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G Y E VD+VIEAV E V +K+++F +L++ C ILATNTS D++ +
Sbjct: 359 LALISGSTSYQELNQVDLVIEAVFEDVEIKKQVFRKLDEVCKVGAILATNTSYQDVDAIA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
+ T +IG HFFSPA+VM LLE+VR +T+ VI M + I K+PV+ G C GF
Sbjct: 419 QVTKRPQDVIGLHFFSPANVMKLLEVVRGAQTADDVITTSMALATTIAKIPVLSGVCYGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR Y + ++L + G ++DSA+ ++G +GP
Sbjct: 479 IGNRLLSVYLRQSQLCLLHGATPEQVDSAMTNWGAAMGPL 518
>gi|296136057|ref|YP_003643299.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
gi|295796179|gb|ADG30969.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
Length = 697
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 282/522 (54%), Gaps = 14/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVN L + + A + V IV+TG G FSGG DI F K
Sbjct: 12 IAVLTLDNPPVNGFGRQQRRLLVEAIDAAIADSGVIGIVVTGAGALFSGGADIREFGKPE 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L+ V+ + E C KP+VAA+ G +GGGLE A+GCH R+A + LP
Sbjct: 72 SMASPHLLD------VIAVAEACTKPVVAAINGTCMGGGLEFALGCHGRVALASALIALP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR VGL A+ M++ +++ ++ L DAVV ++++ +
Sbjct: 126 EVKLGLLPGAGGTQRLPRAVGLEHAMNMIVSGEAVPAKMLAATALFDAVV-EDDVVGAAA 184
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A +A KP R D + A ++ R P+ P C++ + G
Sbjct: 185 AFARHLAESTKPTPRV---RDLAVNHDNAEAFIQFTRTTVAAQFPHEPARLQCVEAVA-G 240
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 313
+ G+L+E +F L+ S+ L H FFA+RA SK+ +V D +P + +V V
Sbjct: 241 SLKPFNEGMLRERSLFAMLMATPESQALRHAFFAERAASKIGDVPADTPTRP--IARVGV 298
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GI+ + V L E E L +G+ TI N +GKL ++ + +
Sbjct: 299 IGAGTMGGGISMNFLNAGFPVTLVETTQEALDRGVATIHKNYDNSAKKGKLKPEQVDKRM 358
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L+ LD+++ D D+VIEAV E++ +K+ +F L+ P ILA+NTST+DL+ +
Sbjct: 359 ALLRPTLDFAQLADCDLVIEAVFETMEVKRDVFERLDAIAKPGAILASNTSTLDLDAIAA 418
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T +IG HFFSPA+VM LLE+VR + T+ + +M + K I+K VV G C GF
Sbjct: 419 YTKRPQDVIGMHFFSPANVMKLLEVVRGKATAKDALATVMKLAKTIRKTAVVSGVCDGFI 478
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y + A LV G ++D A+ ++G+ +GPF+ G
Sbjct: 479 GNRMIEHYGRMANFLVEEGASPQQVDRALEAWGMAMGPFRMG 520
>gi|421870892|ref|ZP_16302521.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|358069221|emb|CCE53399.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
Length = 720
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 280/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 29 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 88
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 89 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 138
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 139 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRVAHSDDT 198
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 199 LAEGLAYAQELVSLGAP-VRRTRDAHGLADRTAAQAAIDAARAELPKRSRGLFSPAKIVD 257
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 258 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 315
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 316 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLTRGRAHVEKVYDGLVAKGRMTPAAH 375
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 376 AARLARFKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 435
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R S V+ + + +KK PV G C
Sbjct: 436 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALARQLKKTPVRAGVC 495
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 496 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 539
>gi|170738585|ref|YP_001767240.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
4-46]
gi|168192859|gb|ACA14806.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium sp.
4-46]
Length = 691
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 281/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL + PVNAL + G+ A + V AIVL G G FS G DI F
Sbjct: 15 VAVLTLQSGPVNALGTALREGIAAALARAEADTAVTAIVLIGGGRMFSAGADITEFGTPP 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+S+ +++ IE KP+VAA+ G ALGGGLE A+ CH R+A P ++GLP
Sbjct: 75 RG--------ISLPDLLDRIEAATKPVVAAIHGNALGGGLETALACHYRVAVPSAKVGLP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+VG KA+E+++ + + + +GLID + E L +
Sbjct: 127 EVKLGILPGAGGTQRLPRIVGPRKALEVIVGGAPLGAGQAAAMGLIDELAPEEGLRAHAV 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + A +P + R ++L +A + R + + +AC+ +E
Sbjct: 187 AFAQRVVAEGRPLTKIRDRDERLAEGRDAPGLFDAFRKENARRMRGFEAPEACIACVEAA 246
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 313
G+ E + F +LV S +VFFA+R T+K+P+V D +P + +V V
Sbjct: 247 CRLPFPQGLAFEREQFLKLVSGSQSAAQRYVFFAERQTAKIPDVPEDTPTRP--IARVGV 304
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA + I V + E E L +G+ I +N +G+L + +
Sbjct: 305 IGAGTMGGGIAMNFLNAGIPVTIVEARREALDRGLAVIRSNYENTARKGRLRPEDVQTRM 364
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L L + KD D++IEAV E + +K++IFS+L++ P ILA+NTS +D++ +
Sbjct: 365 GLLADTLAIEDLKDCDLIIEAVFEDMGIKKEIFSKLDRVAKPGAILASNTSYLDIDEIAS 424
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T +IG HFFSPA+VM LLE+VR RT+ VI M VG+ + K+ V+VG C GF
Sbjct: 425 VTGRPADVIGMHFFSPANVMRLLEVVRGARTAKDVIATAMQVGRKVGKIAVLVGVCHGFV 484
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + A L+ GV + +D I FGLP+GPF
Sbjct: 485 GNRMLAERQREANRLILEGVTPWDVDRVIYEFGLPMGPF 523
>gi|407798586|ref|ZP_11145493.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
gi|407059547|gb|EKE45476.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
Length = 704
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 280/528 (53%), Gaps = 27/528 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL+ + GL + +A V+ G F G DI+ F K
Sbjct: 15 IAVIEVDNPPVNALSAAVRKGLAEAMTRLAGDAGARAAVICCKGRTFIAGADISEFGK-- 72
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L ++ IE KP++AA+ G LGGGLE+A+G H RIA P T++G
Sbjct: 73 --------PPVEPYLPDLIGQIEGAAKPVIAALHGTVLGGGLEVALGAHGRIALPGTRMG 124
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL--- 189
LPE+TLG++PG GGTQRLPR VG+ A++++ + I+++E KLGLID + ++
Sbjct: 125 LPEVTLGLLPGAGGTQRLPRAVGVEAALDLVTSGRQISADEALKLGLIDTLAEGDDPRAA 184
Query: 190 -LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L +R W LD R+ R + + + L R + K+A L
Sbjct: 185 GLAEARRW-LDEG-------RAPRRLSETAAPDADPQTLDRWRARVAKSARGQVAPLRAL 236
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
DV+ +G+ G+ E + F +L+ ++H FFA+R ++ ++ G+KPR V
Sbjct: 237 DVVADGLAMPFADGMAMERQAFMDLMRTPERAAMIHAFFAERRAAQQDDLA--GVKPRKV 294
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
++ VIGGG MG GIA + ++ + V L E + K I + G RGK+ QD
Sbjct: 295 DRIGVIGGGTMGQGIAASALMAGLDVTLVERDDAAAEKARGGIGKMLDGAARRGKIAQDA 354
Query: 369 ANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ + V Y D+VIEAV E++ +KQ +F L+ C P +LATNTS +D
Sbjct: 355 PAALMDGSFRAVTRYDALAQADLVIEAVFENMEVKQDVFRTLDGICRPGAVLATNTSYLD 414
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N + + T+ +IG HFFSPAHVM LLEIV +RT+ +V + K + K+ V G
Sbjct: 415 VNRIADATARPQDVIGLHFFSPAHVMRLLEIVVADRTAPEVAATAFALAKRMGKIGVRSG 474
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y +A +V G + ID A+ +FG P+GP+Q G
Sbjct: 475 VCDGFIGNRMLSTYRAAADHMVLDGASPYDIDRAMVAFGFPMGPYQVG 522
>gi|254247097|ref|ZP_04940418.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
gi|124871873|gb|EAY63589.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
Length = 720
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 280/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 29 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 88
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 89 K----------PPVPPSLPDVCEQIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 138
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + +++E LGL+D + S++
Sbjct: 139 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLVDRIAHSDDT 198
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 199 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 257
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 258 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SPRPVE 315
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 316 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 375
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 376 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 435
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C
Sbjct: 436 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVC 495
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 496 DGFIGNRVLAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQ 539
>gi|107023812|ref|YP_622139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|105894001|gb|ABF77166.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
Length = 708
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 281/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRIAHSDDT 186
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 246 AVEAALTQSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--NPRPVE 303
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L LKG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARLKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
++ +IG HFFSPA+VM LLEIV R S V+ + K +KK PV G C
Sbjct: 424 VLAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALAKQLKKTPVRAGVC 483
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 484 DGFIGNRVLAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQ 527
>gi|413961192|ref|ZP_11400421.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413931906|gb|EKS71192.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 709
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 280/520 (53%), Gaps = 13/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL + GL D E A + V+A+++ G G F G DI F
Sbjct: 21 VLVVTIDHAPVNALNAAVRRGLIDAIEAADADASVRAVLIVGAGRNFIAGADIREF---- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G ++ P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 77 --GKPAVPP--SLPEVCNRIERCEKPVVAAIHGAALGGGLEVALASHYRIAVAGAKLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR RL+G A+ MML I +EE +LGL+D V S+++
Sbjct: 133 EVQLGLLPGAGGTQRSARLIGAQAALSMMLSGHHIGAEEALRLGLVDRVGQSDDVFAEGL 192
Query: 195 LWALD-IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + IA + P R L + + AR + +K + + +D +E
Sbjct: 193 AFAHELIATKAAP--RRTKNARGLADKEASVAAIAAARAETQKKSRGLLSPLKIVDCVEA 250
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ G+ E + F E GLVH FF +R T K P D +PR + ++ V
Sbjct: 251 ALNLPFDEGLRFEREQFLECRESPQRAGLVHAFFVERETQKSPETRDA--QPRALDRIGV 308
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IGGG MG+GIA A + + V + E + L +G +E L+ +G+LT + AL
Sbjct: 309 IGGGTMGAGIAVALLDAGLAVTMIERDEASLERGSAHVEKVYDALIAKGRLTHESKTRAL 368
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+ G Y D D+VIEAV E + K+ +F++L++ C P +LATNTS +D++ +
Sbjct: 369 QRFHGDTKYDALADADLVIEAVFEDMAAKKAVFAQLDRVCKPGAVLATNTSYLDIDEIAA 428
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
S ++G HFFSPA++M LLE+V R SA V+ + K +KKV V G C GF
Sbjct: 429 SISRPQDVLGLHFFSPANIMKLLEVVVPARVSADVVATGFELAKKLKKVAVRAGVCDGFI 488
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A L+ G ++ID A+R FG P+GP+Q
Sbjct: 489 GNRMLAVYRAAADHLMEDGASPYQIDRAVRDFGFPMGPYQ 528
>gi|149377817|ref|ZP_01895548.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
gi|149357875|gb|EDM46366.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
Length = 698
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 293/524 (55%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N +A+I L NPPVN L + + G+ + ++A + + VKA+VL G+ FSGG DI+ F
Sbjct: 9 NGNIAVIRLDNPPVNGLGLELRRGIVNGIQQAEADNAVKAVVLIGSDRAFSGGADISEF- 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + ++ VVN +E +KP++AA+ G +GGGLELA+GCH RIA P Q+
Sbjct: 68 -----GSPKAFAEPNLNTVVNYVESSRKPVIAAISGACMGGGLELALGCHYRIAKPDAQI 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
LPE+ LG++PG GGTQRLPRL+G A+ M++ + +++ L D ++ E L
Sbjct: 123 ALPEVKLGLLPGAGGTQRLPRLIGAEHAVNMIVSGSVVPAKQFKGSPLFDEIIDGE-LFD 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-VLKLARLQAKKTAPNMPQHQACLDV 250
+ +A + + P L + L + E R A N P C++
Sbjct: 182 AAVAYATKVVSEGLP----LKKVRDLKAKHPNPEGFFMFTRNTVGAMAKNYPAPLKCVEA 237
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVR 309
++ + G+ E + F L+ SR L H FF++R TSK+ +V +D + R ++
Sbjct: 238 VKAAVTMPFDKGMEVEREAFVNLMQTPESRALRHAFFSERLTSKIADVPSDTPV--RDIQ 295
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
V VIGGG MG+GI+ + I V L E+ E L +G+ I+ G V +G++++D A
Sbjct: 296 SVGVIGGGTMGTGISINFLNAGIPVTLVEMKQEGLDRGVAAIQKVYEGRVKKGRMSEDDA 355
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ +L L Y + +VD+VIEAV E + +KQ +F +L++ C ILA+NTST+DL+
Sbjct: 356 KAKMALLTPSLTYDDLSNVDLVIEAVFEEMGVKQSVFEKLDEVCKQGAILASNTSTLDLD 415
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T + +IG HFFSPA++M LLE+VR E+T+ V+ M + K IKK VV G C
Sbjct: 416 KIASFTKRPEDVIGLHFFSPANIMKLLEVVRGEKTAKDVLATAMKLAKTIKKTAVVSGVC 475
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A L++ G V +ID AI FG +GP +
Sbjct: 476 DGFIGNRMINQYQREALLMLEEGASVQQIDKAIEKFGFAMGPLR 519
>gi|320332993|ref|YP_004169704.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
gi|319754282|gb|ADV66039.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
Length = 690
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 286/517 (55%), Gaps = 15/517 (2%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVN L+ + GL + A + + V+A+V+ G G F G D+ F G
Sbjct: 13 VLTVNNPPVNVLSPGVPEGLMAGLDAAHANEQVQAVVIVGGGRTFIAGADVRTFSGAEGD 72
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
PDV ++ ++ +KP++AA+ G ALGGGLE+A+ C R+A P QLGLPE+
Sbjct: 73 A-----PDV--RGLMAALDASEKPVIAAIHGTALGGGLEVALACTYRVAVPDAQLGLPEV 125
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
LG++PG GGTQRLPRL+G+ A+ +M S++ + +GL+D V+T + LL ++ +
Sbjct: 126 KLGLLPGAGGTQRLPRLIGVEAALSLMTTGDSVSGAQAHAMGLVDEVITGD-LLTGAQAF 184
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
A +AA P R R ++ R ++ A + +D++E
Sbjct: 185 AERVAAA-WPLPRVSERPVNAATVD-----FAAVRAALQQRARGLASPFLIVDLVEASTR 238
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 316
G+ EA F + SRGL H FFA+R +K+ N G R VR VAVIG
Sbjct: 239 VPFEEGLRLEADAFMRALQTPQSRGLRHAFFAEREAAKI-NGLPKGTPTRDVRSVAVIGA 297
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG GIA + V L E E L +G+ I N +G+LT + + +L
Sbjct: 298 GTMGGGIAMNFANAGVPVTLVETQREALDRGLAVIRRNYEQSARKGRLTPQQVEERMGLL 357
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
+ LD ++ D D+VIEAV E++ +K+ +F++L+ P +LATNTST+D++ + T
Sbjct: 358 RPTLDMADIADADLVIEAVFENMDVKKAVFAQLDAHAKPTAMLATNTSTLDVDALAAGTR 417
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
R++G HFFSPA+VM LLE+VR ERT+ V+ +M V + I+KV VVVG C GF NR
Sbjct: 418 DPSRVLGMHFFSPANVMKLLEVVRGERTAPDVLATVMRVARTIRKVGVVVGVCDGFVGNR 477
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
Y + A L+ G +D A+ +FGLP+GPF+
Sbjct: 478 MINAYGREAHQLLVEGASPRDVDDAMHAFGLPMGPFE 514
>gi|206559114|ref|YP_002229874.1| putative trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
cenocepacia J2315]
gi|444370153|ref|ZP_21169838.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198035151|emb|CAR51025.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase] [Burkholderia cenocepacia J2315]
gi|443597878|gb|ELT66281.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 707
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 281/524 (53%), Gaps = 16/524 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRVAHSDDT 186
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRTAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 246 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 303
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARFKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ D +IG HFFSPA+VM LLEIV R S V+ + + +KK PV G C
Sbjct: 424 ALASIDRPAD-VIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALARQLKKTPVRAGVC 482
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 483 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 526
>gi|334140782|ref|YP_004533988.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333938812|emb|CCA92170.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Novosphingobium sp.
PP1Y]
Length = 709
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 286/529 (54%), Gaps = 25/529 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA+ITL NPPVNAL+ + AGL + E + + A V+ G F G DIN F +
Sbjct: 25 DRVAVITLDNPPVNALSHALRAGLLAELEAVLADPAIDAAVIHCAGRTFVAGADINEFGR 84
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + + IED KP++AA+ G +LGGG EL++ CH R+A P ++G
Sbjct: 85 P--------IAQPGFPELFSAIEDSAKPVIAAIHGTSLGGGFELSLACHYRVAVPSARVG 136
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPRLVG A+E+M + + +EE +GL+DAV+ ++L+
Sbjct: 137 LPEVKLGILPGAGGTQRLPRLVGACAALEIMTSGRQVKAEEALAIGLLDAVLPGQDLVME 196
Query: 193 SRLWALDIAAR--RKPWIRS---LHRTDKLGSLSEAREVLKLARLQAKKTAPNM--PQHQ 245
+ +A ++ A R P +R + D+ R +K A AP +
Sbjct: 197 AVAFARNVVAEGARTPRVRDREDMLEVDRKDPELVDRFFIKNAHRFRGLDAPTAIGAAVR 256
Query: 246 ACLDV-IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
A L + EEG+ H E ++ L S L ++FFA+R T++VP++ ++
Sbjct: 257 AALSLPFEEGLAH--------EQQLCLALAEGHQSEALRYLFFAERQTTRVPDLPPNTMQ 308
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R V + VIG G MG GI + + V L E + L +G I + +G++
Sbjct: 309 -RPVASIGVIGAGTMGGGITMTFLDAGLPVTLVETSKAALERGCSNIRRHYEASAQKGRM 367
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ D+ + +L LD + +D D VIEAV E + LK+ +F++L+ P ILA+NTS
Sbjct: 368 SADEVETRMSLLSPRLDLTALRDADFVIEAVFEDLALKRDLFAQLDALAAPDAILASNTS 427
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+DL+ + + TS +R++G HFFSP +VM L+E+VRT RT + + M++ + I KVPV
Sbjct: 428 FLDLDAIADATSQPERVLGLHFFSPVNVMRLVEVVRTTRTKPENVATAMSLARHIGKVPV 487
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ C GF NR P A +++ G+ + RID + +G IG FQ
Sbjct: 488 LSAVCDGFIANRLMAPRGAEAEIMMLEGIPIERIDKVLTDYGFGIGHFQ 536
>gi|407714172|ref|YP_006834737.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407236356|gb|AFT86555.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 734
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 282/524 (53%), Gaps = 21/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 46 VLLVTIDHAPVNALSADVRRGLLAAIEAADSDRSVEAVLLVGAGRNFIAGADIREFGK-- 103
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 104 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 155
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G A+++ML + +++E LGL+D + S ++L
Sbjct: 156 LPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAKEALALGLVDRLGASGDILAE 215
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 249
+A + A + RT +LS+ + L AR + +K + + +D
Sbjct: 216 GLAYAHALLAAHA----TARRTRDAAALSDRAASLAALAAARTETEKKSRGLFSPLKIVD 271
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + G+ E ++F + + GLVH FFA+R K P D KPR +
Sbjct: 272 AVEAAVTQPFEEGLRVERQLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRALE 329
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++ K
Sbjct: 330 AIGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAAKK 389
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y + D+VIEAV E + +K+ +F+EL++ C +LATNTS +D++
Sbjct: 390 AELMARWTGSTSYEALANADLVIEAVFEDLAVKKAVFAELDRVCKAGAVLATNTSYLDID 449
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S +IG HFFSPA++M LLE+V SA V+ + K ++K PV G C
Sbjct: 450 AIAASISRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAGVC 509
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 510 DGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQ 553
>gi|221199900|ref|ZP_03572943.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
gi|221207431|ref|ZP_03580440.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221172634|gb|EEE05072.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221180139|gb|EEE12543.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
Length = 710
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 285/524 (54%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++E+ LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEDALALGLVDRLAHSDDT 188
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAPARRT-RDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ + LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 SARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + +++KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARLLKKMPVRAGVC 485
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|374294040|ref|YP_005041063.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
gi|357427443|emb|CBS90387.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
Length = 707
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 278/521 (53%), Gaps = 17/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ PPVNA+ + +GL E + + +A++L G F G DI F
Sbjct: 23 VGVITVDYPPVNAVGHGVRSGLVAALEAGLADAEAEALLLVCAGRTFMAGADIREF---- 78
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G S P ++ VV ++ KP++AA+ G ALGGGLE+A+ CH R+A +LGLP
Sbjct: 79 --GKPSAPP--TLPEVVARLDASTKPVIAAIHGTALGGGLEVALACHLRVALKSAKLGLP 134
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS- 193
E+ LG++PG GGTQRLPRLVG +KA++M+L + EE +GL+DAV L+
Sbjct: 135 EVKLGLLPGAGGTQRLPRLVGAAKALDMILSGDPVGGEEALTIGLVDAVEDDVSPLEAGL 194
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
R +A R P S RTD++ A K A L K P + +D +E
Sbjct: 195 RTADRLLADGRMPEPVSA-RTDRIAGTDPALFTAKRAEL--AKRQPQLFSPHRIVDAVEA 251
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G +E ++F L +D+ + GL+H FFA+R +KVP + G R +RKV
Sbjct: 252 AVTLPFAEGTARERELF--LACMDSPQRAGLIHAFFAEREVAKVPGLP-AGTPTREIRKV 308
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIG G MG GIA I VVL + E L +G I N +G+LT +
Sbjct: 309 GVIGAGTMGGGIAMCFANAGIPVVLVDSAQEALDRGTAAIRRNYEATARKGRLTAAQVEE 368
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ L Y + D D+V+EA ES+ +K+ IF L+ C P ILATNTST+D++ +
Sbjct: 369 RMALIRPTLSYGDLADADLVVEAAFESMEVKRTIFRTLDDTCKPGAILATNTSTLDVDAI 428
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM LLE+VR RTS V+ +M + + I KV V VG C G
Sbjct: 429 AAATGRPQDVLGMHFFSPANVMRLLEVVRGARTSDTVLATVMGLARRIGKVGVAVGVCYG 488
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + + LV G ++D + FG P+G F
Sbjct: 489 FVGNRILHQRGRESMALVEEGASPEQVDRVLTEFGFPLGHF 529
>gi|440227692|ref|YP_007334783.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
gi|440039203|gb|AGB72237.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
Length = 655
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 280/520 (53%), Gaps = 17/520 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+ ++T+ N PVNA++ + +GL E A V IVLTG G F GG DI F K
Sbjct: 16 DGILVVTIDNAPVNAISADVRSGLMAALEHAEKEGAVAGIVLTGAGNNFIGGADIKEFGK 75
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
L+P + V++ IE KP+VAA+ G ALGGGLE+A+ CH R+AAP +LG
Sbjct: 76 -------PLVPP-HLPDVISRIESSPKPVVAAINGAALGGGLEVALACHRRLAAPTAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPRL G++ AI+M+ + +++ E KLG++D V E
Sbjct: 128 LPEVKLGIVPGAGGTQRLPRLTGIAAAIDMIANGRIVSAAEALKLGIVDGVTKGE----- 182
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
L A IA + SL RT L EA + + A A + A + ++
Sbjct: 183 --LIAEAIADAKMTNAVSLRRTGSLTVPPEATDAIDKAASDASRKARGQRAPSEAVRLVR 240
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G+ +E + F L + + L HVFFA+RA KV + + PR + +
Sbjct: 241 LAATVSLSEGLAEERRTFIALRDSEEAAALRHVFFAERAAGKVEGLETVA--PRKIETIG 298
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++G GLMGSGIA + + V+ E ++E KG + I A + V G+L +
Sbjct: 299 IVGTGLMGSGIAVSALNGGYRVIGVEQSAEVAEKGRERITALLDKAVQSGRLDAAGREDR 358
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L L D + D++IEAV + + +K ++F L+ ILATNTS +D ++V
Sbjct: 359 LGRLTVTADMQQLVQADLIIEAVFDDLTVKTELFQCLDSIVRAEAILATNTSYLDPDVVA 418
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T +R++G HFFSPA++M LLE+V ++T+ V+ + + K + K+P+V G GF
Sbjct: 419 AATQRPERVVGLHFFSPANIMRLLEVVNCKQTAPDVLATAIALAKRLGKLPIVSGVTEGF 478
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR F Y + A +V G ID+A+ ++G P+GPF
Sbjct: 479 IGNRIFSAYRREAEYMVEDGASPQEIDAALEAYGFPMGPF 518
>gi|320164233|gb|EFW41132.1| mitochondrial trifunctional protein [Capsaspora owczarzaki ATCC
30864]
Length = 771
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 298/555 (53%), Gaps = 38/555 (6%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE---ATSRDD--VKAIVLTGNGG 59
+ V DGVAI+ L +P VN+L+ + A +FE A +D+ A++++
Sbjct: 44 HIKASVNADGVAIVRLDSPKVNSLSQELSA----EFESVLSALEKDNRVSSAVLISTKKD 99
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI + A D++ + + + ++N I KPIVAA+ G LGGGLE+AM
Sbjct: 100 AFIVGADIGMLSAAKDADDLANISS-NGQNMLNRIAKSNKPIVAAIHGSCLGGGLEVAMA 158
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RIA PKT L LPE+ LG++PG GGTQRLP+LVGL A++MML K++ +++ KL
Sbjct: 159 CHYRIATVHPKTALALPEVMLGLLPGAGGTQRLPKLVGLPDALDMMLTGKNVRADKAKKL 218
Query: 178 GLIDAVVTS---------EELLKVSRLWALDIAARRKPWIRSLHRTDKLGS-------LS 221
GLIDAVV S + LK A+ A + R+ L S L+
Sbjct: 219 GLIDAVVQSMGPGIADPIDNTLKNLEREAVIAAKALAAGKLKVDRSVPLLSVKGITKYLT 278
Query: 222 EARE-----VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 275
E E VL+ AR KKT N P A +DV+ G+ G +G+ EAK F +L M
Sbjct: 279 EEVEYGRNFVLQKARETVLKKTQGNYPAPLAIIDVVRAGLAGGFTNGLQAEAKAFGKLGM 338
Query: 276 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 335
D S+ L+ ++F Q A K G R + VAV+G GLMG+GIA I N V+
Sbjct: 339 TDESKALIGLYFGQTALKK----NRYGAPERPTQNVAVLGAGLMGAGIAQVSIEKNYNVI 394
Query: 336 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 395
LK++ E L +G I N+ G V R LT + + + + L Y F +VDMVIEAV
Sbjct: 395 LKDMKPEGLARGQAQIYKNLDGKVKRKSLTSFERDQLVARVSPQLTYQNFGEVDMVIEAV 454
Query: 396 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 455
E + LKQ+I ++E PPH I A+NTS + + + + +S D++IG H+FSP MPL
Sbjct: 455 FEDLALKQRIIKDVEAVLPPHAIFASNTSALPIGEIAKASSRPDKVIGMHYFSPVDKMPL 514
Query: 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 515
LEI+ T++TS + + VG K +VV + GF R P A ++ G+D
Sbjct: 515 LEIITTDKTSKETAAAAVQVGLKQGKTVIVVKDGPGFYTTRILAPMLAEAITTLTEGIDF 574
Query: 516 FRIDSAIRSFGLPIG 530
F +D ++ +G P+G
Sbjct: 575 FHLDKVMQKYGFPVG 589
>gi|83950253|ref|ZP_00958986.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
gi|83838152|gb|EAP77448.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
Length = 653
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 277/523 (52%), Gaps = 19/523 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +AI T+ NPPVNA+ + GL E + ++A +L G F G DI F +
Sbjct: 9 DDIAIATVDNPPVNAVNHAVREGLLAALAETEANPAIRATILLCAGRSFIAGADIREFGQ 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PDV ++ +E KP +AA+ G ALGGGLE+A+GCH RIAAP +LG
Sbjct: 69 ---PPKPPHLPDV-----IDRMEGATKPWLAAIHGTALGGGLEIALGCHYRIAAPSARLG 120
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+TLG+IPG GGT RLPRL+ +A+EM+ K +T+ + +GLIDA+ + L+
Sbjct: 121 LPEVTLGLIPGAGGTVRLPRLIAAEEALEMISGGKPVTAPKALDIGLIDALAEGD--LQE 178
Query: 193 SRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ ALD R P L A + RL A+ P A L+
Sbjct: 179 A---ALDFLRARLDAPLPTPLRHRQPHAPRDAADWDKRRQRLHARARGQAAPL--AALEA 233
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
IE + + +E F L S L HVFFA+RA ++P + D+ P + +
Sbjct: 234 IETALKEPADLALARERDSFLRLKSHPESAALRHVFFAERAAGQMPRLKDV--TPGPLTQ 291
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ VIGGG MG+GIATA +L ++ V L E ++ G + ++ G R + D+
Sbjct: 292 IGVIGGGTMGAGIATACLLADLPVTLIERDAAACEAGRARVTDSLDGARARRLIDADRHA 351
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
L L DY+ D+VIEAV E + LK +F+ L+ P CILA+NTS +D+N
Sbjct: 352 TLLSQLATDTDYAALTGADLVIEAVFEDMDLKHAVFAALDAHTRPDCILASNTSYLDIND 411
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T+ DR+IG HFFSPAHVM LLE++ T+R S + + +GK ++K+ V G C
Sbjct: 412 IARATAQPDRVIGLHFFSPAHVMKLLELIVTDRASDRALATGFALGKRLRKLTVPAGVCD 471
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + ++ G +ID A+R FG P+G F+
Sbjct: 472 GFIGNRILSSYRRDTDAILQDGATPSQIDQAMRDFGFPMGIFE 514
>gi|423018204|ref|ZP_17008925.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
gi|338778707|gb|EGP43176.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
Length = 706
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 285/519 (54%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ +PPVNAL+ + AGL ++A + V+A++LTG G F G DI F K
Sbjct: 18 VLVVTIDHPPVNALSAEVRAGLLQAIDQAQADPQVRAVLLTGAGNNFIAGADIREFGKPP 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV N IE KP+VAA+ G ALGGGLE+A+ H R+A P +LGLP
Sbjct: 78 RP---PALPDV-----CNRIEASAKPVVAALHGAALGGGLEVALAAHYRVALPGAKLGLP 129
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GGTQR PRL+G + A+++ML K +T++ GL D + T + L
Sbjct: 130 EVTLGLLPGAGGTQRAPRLIGAAAALDLMLSGKPMTAQAAVAAGLADELATGADPLAAGL 189
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ + AR RS + + + A T + L+ +
Sbjct: 190 DYTRRLLARNAAPRRSRDGQALADKAAALAAIDAAGQRIAASTR-GLFSPAKILEAVRAA 248
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ E +F + + GL+H FFA+R T+K+P + +PR + +V VI
Sbjct: 249 VELPFDEGLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELKQA--RPRRLERVGVI 306
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA A + + VV+ E + L +G + +E L +G+++ D+ L
Sbjct: 307 GGGTMGAGIAVALLDAGLPVVMVEQDDAALARGRQRVEHVYDLLAGKGRMSADERAARLA 366
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
L G DY+ D D+VIEAV E + +KQ +F++L++ P +LATNTS +D++ + +
Sbjct: 367 RLTGATDYAALADADLVIEAVFEDMDVKQAVFAQLDRVVRPDAVLATNTSYLDVDRIAQA 426
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T R++G HFFSPA++M LLE+V T+A + + + ++K+ V G C GF
Sbjct: 427 TRDPGRVLGLHFFSPANIMKLLEVVVGRDTAADTVATGFELARRLRKIAVRAGVCDGFIG 486
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Q+A +++ G + ID+A+R FG P+GP+Q
Sbjct: 487 NRILAVHRQAADMMMEDGASPYDIDTAVRDFGYPMGPYQ 525
>gi|126739002|ref|ZP_01754698.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
gi|126720183|gb|EBA16890.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
Length = 698
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 295/527 (55%), Gaps = 34/527 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + I GL E A S + KA+++ G+G + G DI F K
Sbjct: 13 IAVLKAQNPPVNALGVDIRKGLLSGIERAES-EGAKAVLIYGDGRTYFAGADIKEFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P++ N IE +V+A+ G ALGGGLE+A+ H RIA P ++GLP
Sbjct: 72 ---QEPWLPEL-----CNRIEASPLVVVSAMHGTALGGGLEVALSSHYRIAVPTAKMGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+ G KA+EM+ + I ++E + G+ID + E ++
Sbjct: 124 EVHLGILPGAGGTQRLPRVAGTEKALEMITTGRHIGAKEALEAGIIDRIAEGEPR-EIGL 182
Query: 195 LWALDI----AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ-AKKTAPNMPQHQACLD 249
++A ++ A RR ++ EA LK R Q + T Q A
Sbjct: 183 VYARELLSAGAGRRAVGEMPAPAAVDFDAIYEA--TLKKGRGQLSPATCVRAVQAAAEAP 240
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+EEG+ +E ++F EL+ D GL+H FF++RA SK+P + G++PR +
Sbjct: 241 SLEEGLK--------RERELFMELMNSDQRLGLIHAFFSERAVSKLPELK--GVEPRQLA 290
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK- 368
+ VIGGG MG+GIATA +L+ + VV+ E++ E I N++G + RGK+++++
Sbjct: 291 SIGVIGGGTMGAGIATAALLSGLSVVMLEMSEEAAAAAKGRIAGNLQGALKRGKISEEQF 350
Query: 369 ---ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
AL + G Y DVD+VIEAV E + +K+++F +L+ C ILA+NTS
Sbjct: 351 AQLTEEALSLATG---YEALSDVDLVIEAVFEEMSVKKEVFGKLDAVCKKGAILASNTSY 407
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D+N + TS + +IG HFFSPAHVM LLE+V ++T+ V+ +GK +KK+ V
Sbjct: 408 LDVNEIAAATSRPEDVIGLHFFSPAHVMKLLEVVVADKTALDVVATGFELGKRLKKISVR 467
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR Y ++A +V G ++ID A+ FG +GPF
Sbjct: 468 AGVCDGFIGNRILATYRKAADHMVLDGASPYQIDKALTEFGFAMGPF 514
>gi|221211110|ref|ZP_03584089.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
gi|221168471|gb|EEE00939.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
Length = 710
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAP-ARRTRDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTSAAQ 365
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|197106678|ref|YP_002132055.1| fatty oxidation complex subunit alpha [Phenylobacterium zucineum
HLK1]
gi|196480098|gb|ACG79626.1| fatty oxidation complex, alpha subunit [Phenylobacterium zucineum
HLK1]
Length = 691
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 285/528 (53%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT + VAI+TL +PPVNAL+ + GL + F++A D KAIVL G F G
Sbjct: 7 VTTLTRDGDVAIVTLNSPPVNALSANVRDGLYEGFKQAID-SDAKAIVLICEGRTFIAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F GA + +PDV ++E+ KP+VAA+ G ALGGGLE+A+ H R+A
Sbjct: 66 DITEF---GGAMKGASLPDVQA-----MMENSPKPVVAAIHGTALGGGLEVALCAHYRVA 117
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P +LGLPE+ LG++PG GGTQRLPR+ G+ KA+EM+ + ++E +GL+D +V
Sbjct: 118 VPSARLGLPEVNLGLLPGAGGTQRLPRIAGVEKALEMVTSGRHAPAKEALAMGLVDELVE 177
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+L + +A + A KP ++ KL E+ R + + +
Sbjct: 178 EGKLKDGAVAFARKLVAENKPLVKVRENNAKLEEAKGKPEIFAEFRKKNARKFRGFLAPE 237
Query: 246 ACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+ IE + + G+ E K+F EL+ S + FFA+R K+P+V D
Sbjct: 238 YNIRCIEAAVNSNSFEEGLAVERKLFMELMTGPQSAAQRYYFFAERTAQKIPDVPD-DTP 296
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R V+KV V+G G MG GIA + I V + E+ + L +G+ TI N +RG +
Sbjct: 297 TRPVKKVGVLGAGTMGGGIAMNFLNVGIPVTIVELKQDALDRGLATIRKNYE--RSRGAV 354
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + + +L G L +F D D++IEAV E + +K+ +F++L+ P ILATNTS
Sbjct: 355 PE-QTEQRMSLLTGSLSMDDFADCDLIIEAVFERMDIKKDVFAKLDGIAKPGAILATNTS 413
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPA+VM LLE++R + T+ VI M + K I KV V
Sbjct: 414 YLNIDEIASATKRPQDVIGLHFFSPANVMKLLEVIRADHTAKDVIATSMKLAKQIGKVAV 473
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ G C GF NR + A LV G + ID + FG P+GPF
Sbjct: 474 LAGVCPGFIGNRMLSQRQREANKLVLEGAMPWDIDRVLYDFGFPMGPF 521
>gi|393778010|ref|ZP_10366298.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
gi|392715061|gb|EIZ02647.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
Length = 699
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 288/523 (55%), Gaps = 20/523 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GVA+ITL PPVN L+ + + + + + A + V+AIV+ G G FS G D+ F
Sbjct: 12 ENGVAVITLSQPPVNPLSHAVRSAIVEGVDRAHTDVAVRAIVIVGAGRYFSAGADMREF- 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + ++ V+ +++D KP++AA+EG+A+GGGLELA+ CH R+A TQ+
Sbjct: 71 -----GTPAATQEPTLSTVLRILDDTSKPVIAAIEGVAMGGGLELALACHYRVAQAGTQV 125
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG--LIDAVVTSEEL 189
LPE+ G++PG GGTQRLPRL+G+ A++M++ K++T+ LG L D VV E +
Sbjct: 126 ALPEVKRGILPGAGGTQRLPRLLGVEAALDMIVTGKTVTAA---ALGAPLFDRVVDGE-V 181
Query: 190 LKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L + A ++A R P +R D+ L A + AR + +PN+P C+
Sbjct: 182 LSAALALAQEVADSRPLPRVR-----DRQVKLPGADAFFQHARRIVQARSPNLPAPLKCV 236
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D + + G+ KE +F EL +R L H FFA+R K+P + G + R V
Sbjct: 237 DAVAAALEPFDI-GLPKERAMFVELSRSREARALQHGFFAEREAPKIPALP-AGTQARDV 294
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ AVIG G MG GIA I V L+E + E L +G+ I N +G+LT +
Sbjct: 295 QAGAVIGAGTMGGGIAMNFANAGIPVWLRETSQEALDRGLGIIRRNYEASAKKGRLTDAQ 354
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ +++ L Y++ D+VIEAV E +K+ +F L++ P ILATNTST+D+
Sbjct: 355 VEQRMALIRPTLQYADIAQADVVIEAVFEDWGVKETVFRTLDEVMKPGAILATNTSTLDV 414
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + T ++G HFFSPA+VM LLE+V+ T+ VI M + K KV V+ G
Sbjct: 415 NRIAAFTRRPQDVVGLHFFSPANVMRLLEVVQGAATAPDVIATAMALAKRFSKVGVLSGV 474
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
C GF NR Y + A L+ G ++D A+ FG+ +GP
Sbjct: 475 CDGFIGNRMLDRYIRQAHFLLEEGALPEQVDRALEKFGMAMGP 517
>gi|392410492|ref|YP_006447099.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390623628|gb|AFM24835.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 709
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 288/527 (54%), Gaps = 14/527 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD---IN 68
D VA++ + NPPVN L+ V L + VK IVLTG G F G D I
Sbjct: 13 QDNVAVLFMNNPPVNQLSQSFVDDLAEAVSSGFDDPTVKGIVLTGTGKNFIAGADLTEIY 72
Query: 69 VFQKVHGAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
V ++ SL+P V ++ + IE KP++AA+ G ALGGGLELAM CH R+A
Sbjct: 73 VLKEKE-----SLLPRVEAMSAFFHQIELGPKPVIAAINGNALGGGLELAMACHYRVALH 127
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
QLG PE+ +G+IPG GGTQRLPR VGL A+EMM + I S GLID V E
Sbjct: 128 GVQLGQPEVKVGLIPGAGGTQRLPRFVGLHDALEMMTVGDPIDSRTALSRGLIDEVTEPE 187
Query: 188 ELLKVSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
L+V+ A ++A R+ +R ++L S +E + V AR+QA+K A
Sbjct: 188 HFLRVALSAATNLAEGTISLESSRTRNRNNRLPSSAELKAVTSAARVQAEKKAKGYLAPF 247
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
++ +E G+ + + +E ++F E + D ++ L+ +F RA ++ ++ + KP
Sbjct: 248 KVIEALENGLSPDIEADIRREGELFAECALSDVAKNLIGIFLNTRAAGRLTRISRV--KP 305
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
++VAV+GGG+MGSGI + VL ++ E + +G+ ++ + R K+
Sbjct: 306 ADTKQVAVLGGGVMGSGIVNLLLRRGFDAVLWDITEEAVDRGVASVRKTFEHAIKRKKML 365
Query: 366 QDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ L K L+ + ++ D++IEAVIE++ +KQ I+ +LE+ C + ATNTS
Sbjct: 366 PTELETLLDKRLRVTTSLEDMQEADLIIEAVIENMDIKQSIWKQLEEICKTEAVFATNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+ + + Q R IG HFF+PAH M LLEI+ T++TS + + + I K+PV
Sbjct: 426 ALPIAEIASILKDQGRAIGLHFFNPAHQMQLLEIICTQKTSDLTLATSVAFARAIGKIPV 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+V + GF V+R A L++ GVD RI++A++ FG+P+GP
Sbjct: 486 IVNDSPGFYVSRQLGGLLGGAVYLMADGVDWSRIENAMKDFGMPMGP 532
>gi|421471274|ref|ZP_15919575.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400225835|gb|EJO55970.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 710
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAP-ARRTRDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|161523604|ref|YP_001578616.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189351627|ref|YP_001947255.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341033|gb|ABX14119.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189335649|dbj|BAG44719.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 710
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P R L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAP-ARRTRDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALTQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQ 529
>gi|116694675|ref|YP_728886.1| enoyl-CoA hydratase/isomerase family protein [Ralstonia eutropha
H16]
gi|113529174|emb|CAJ95521.1| Enoyl-CoA hydratase/isomerase family [Ralstonia eutropha H16]
Length = 692
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 284/521 (54%), Gaps = 15/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+++L +PPVNAL+ + +G++D A + D VKA+VL G F G DI F K
Sbjct: 16 IAVLSLDSPPVNALSAAVRSGIRDGMARALADDAVKAVVLICAGKTFVAGADITEFGKPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S+ V +IED KP+VAA+ G ALGGGLELA+ CH RIA + GLP
Sbjct: 76 AG--------PSLAEVQAMIEDAPKPVVAAIHGTALGGGLELALVCHYRIATRSAKCGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPR+VG +A+EM+ + + ++GL+D + L +
Sbjct: 128 EVNLGLLPGAGGTQRLPRIVGPEQALEMVTSGTHVAASAAAEMGLVDLLTDDASLRADAV 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + A ++P + DK+ + E+ R + + + IE
Sbjct: 188 AFARKVVAEKRPLRKVRESDDKVAAARGKPELFAAFRKANARRFRGFDAPEFNIRCIEAA 247
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVA 312
+ +G+ +E ++F EL+ S + FFA R +V NV D+G VR++
Sbjct: 248 VELPFEAGLKRERELFTELLNGTQSAAQRYYFFASR---QVWNVPDVGADTPALAVRRIG 304
Query: 313 VIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
++G G MG GIA + LN Y V + E + + L +G+KTI AN +G+L+
Sbjct: 305 IVGAGTMGGGIAM-NFLNAGYPVTIVESSQQALDRGLKTIRANYDNTARKGRLSAADVEA 363
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L LD D D++IEAV E++ +KQ++F +L++ ILATNTS +D+N++
Sbjct: 364 RMALLTPTLDLQLLADADLIIEAVFENMEVKQELFGKLDRIAKAGAILATNTSALDVNVI 423
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+S + +IG HFFSPA+VM LLE+VR ++T+ VI M + + I KV +VG C G
Sbjct: 424 AAASSRPEAVIGLHFFSPANVMKLLEVVRGDKTAKPVIRTAMELARKIGKVAALVGVCPG 483
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + A+ LV G + +D + FG P+GPF
Sbjct: 484 FVGNRMLAQRQREAQKLVLDGALPWDVDRVLYDFGFPMGPF 524
>gi|449266986|gb|EMC77964.1| Peroxisomal bifunctional enzyme, partial [Columba livia]
Length = 703
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 287/513 (55%), Gaps = 20/513 (3%)
Query: 28 LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87
++P++ L++ + A + VKAI++ G G+FS G DI F G +SL P VS
Sbjct: 1 FSLPVLQALENGLKRADADPSVKAIMICGENGKFSAGADIRGFSSPKTQG-ISLGPFVS- 58
Query: 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGT 147
LIE C+KP+VAA+EG+ALGGGLE+A+GCH R+A K ++GLPE+T+G++PG GT
Sbjct: 59 -----LIERCEKPVVAAIEGVALGGGLEVALGCHYRVAHVKARMGLPEVTIGLLPGGEGT 113
Query: 148 QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207
QRLPRL+G+ A++++ + I + E KLGL+D VV + + RL I +P
Sbjct: 114 QRLPRLIGVPAALDIITTGRHIPATEALKLGLVDEVVKEDTIEAAIRLANKVIGQPLEPR 173
Query: 208 IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEA 267
SL KL ++ L A ++ KK A + C + GV KE
Sbjct: 174 RLSLRPVPKLPNMEA---FLSEALVKLKKQARGYLAPELCFQAVRAATELPFADGVRKER 230
Query: 268 KVFKELVMLDTSRGLVHVFFAQRATSK--VPN-VTDIGLKPRGVRKVAVIGGGLMGSGIA 324
++F L+ ++ L + FFA+RA K P+ + P+ + K AVIG G MG GI
Sbjct: 231 ELFNVLLTSGQAQALQYAFFAERAVQKWTTPHGASWQNASPQPIHKAAVIGLGTMGRGIV 290
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLVTRGKLTQDKANNALKMLKGVL 380
T+ + NI VV E N EYL G K + E + G T D N A L+ +
Sbjct: 291 TSLVKANIPVVALEQNLEYLNTGRKAVMLLLEREAMKM-EHGAQTLDFHNPA--RLQFTV 347
Query: 381 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 440
D+ +DVD+VIEAV E++PLK++IF +L C P L TNTS ++++ + TS +
Sbjct: 348 DFDALRDVDLVIEAVFENMPLKKEIFQKLSGICKPAAFLCTNTSALNIDEIASATSRPQQ 407
Query: 441 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500
+IG HFFSPAH+M LLEI+ TS I + + K++KKV VVVGNC GFA NR FP
Sbjct: 408 VIGTHFFSPAHIMRLLEIIYGHHTSPTTIATAVQLAKVLKKVGVVVGNCFGFAGNRMMFP 467
Query: 501 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
Y + A L+ G +D + FG IGPF+
Sbjct: 468 YVEQAVFLLEEGSRPEAVDQVLEDFGFKIGPFR 500
>gi|341613565|ref|ZP_08700434.1| fatty oxidation complex, alpha subunit [Citromicrobium sp. JLT1363]
Length = 678
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 283/525 (53%), Gaps = 14/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + AGL D EA S D V+A+V+ +G F G DI F
Sbjct: 10 HDNVLVIISDNPPVNALGQAVRAGLVDGISEALSDDSVEAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E+ KP+VAA+ G ALGGG E+A+ CH R+A P ++
Sbjct: 70 KPPQG--------PSLPEALDKLEESDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKM 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GTQRLPRLVG A+ ++ + I++++ ++GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRLVGAEAALPLVAIGNPISAKKAKEIGLLDELVGEDSL-- 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A + +P RS + ++ R + + A ++ +
Sbjct: 180 AADAIAFAKSKIGQPVPRSSEGDANQDGIKNP-DIFDEFRAKNGRKMRGFDAPNAAIEAV 238
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
+ GV KE ++F +L+ S+ + H FFA+RA +KV ++ D L ++K
Sbjct: 239 KAAGELSYAEGVKKERELFGKLMTGTQSKAMRHYFFAERAANKVDDIPADTPLI--DIKK 296
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V +IG G MG GIA + I V + E+ E L +G T+ N +G++T ++
Sbjct: 297 VGIIGAGTMGGGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQVE 356
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
A+ +L L+YS+ D D+VIEAV ES+ +K+ +F +L++ ILA+NTS +D+N
Sbjct: 357 QAMGLLTPTLEYSDLADCDLVIEAVYESMDVKKDVFGKLDEVVKDGAILASNTSYLDINE 416
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM LLE+VR E+T V+ M + K I KV V G C
Sbjct: 417 IATATKRPGYVLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVCP 476
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G + + +D + FG P+GPFQ G
Sbjct: 477 GFIGNRMLSKRQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMG 521
>gi|365898261|ref|ZP_09436229.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
gi|365421006|emb|CCE08771.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
Length = 698
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 289/525 (55%), Gaps = 13/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +KAIVLT G F G DI F
Sbjct: 10 HDIVGIVTVDSPPVNALSAAVRGGILECVKAAVADPAIKAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A +L
Sbjct: 70 KPP--------KPPALNDVLSEIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKAGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+A + A +P +R L D KL + R + A K + + A D
Sbjct: 180 GGEAFARKVVAEGRP-LRKLRDDDSKLAAAKADRSIFTSAVAALTKKSRGLEAPLAAADA 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I G+ KE + F L+ D S+ + FFA+R SK+ V + G K R V++
Sbjct: 239 VGYAIDLPFDEGLKKEREDFLRLLTSDQSKAQRYAFFAEREASKIAGVPE-GTKSRPVQR 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPA 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ GV+ +D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALINGVVGLENVRDADLVIEAVFETMAVKKEVFGKLDQFAKPGAVLASNTSYLNIDE 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ ++TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAKQTSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|46309503|ref|NP_996951.1| peroxisomal bifunctional enzyme [Danio rerio]
gi|82185947|sp|Q6NYL3.1|ECHP_DANRE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|42542964|gb|AAH66545.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Danio rerio]
Length = 718
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 296/531 (55%), Gaps = 26/531 (4%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+ VA+ITL NPPVNAL+ + + E A S V A+V+ G GRF GG DI
Sbjct: 5 ELVKRSVALITLTNPPVNALSSAVRHAISKTMERALSDPKVTAVVICGENGRFCGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F AG + P V + ++ IE +KP+VAA+EG+ALGGG ELA+ CH RIA K
Sbjct: 65 EF-----AGPLRGPPLVPL---LDAIEAGEKPVVAAIEGVALGGGFELALVCHYRIAHYK 116
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
+LGLPE+TLG++P GGTQRLPRL+G+ A+E++ + ++++E KLG++D V T +
Sbjct: 117 ARLGLPEVTLGILPAAGGTQRLPRLIGIPAALELITTGRHVSAQEALKLGMVDQV-TEQN 175
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAKKTAPNMPQHQA 246
+V+ +AL KP S R L + + + A +Q +K A + A
Sbjct: 176 TCEVALEFALKAVG--KPL--SSRRLSMLTTPCPPGLDGIFEAATMQVQKKARGVMAPLA 231
Query: 247 CLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIG- 302
C+ + + YS G+ +E ++ L ++ L + FFAQR K +P+
Sbjct: 232 CVQAVRAATLP--YSEGIKREGELMATLFSSGQAQALQYSFFAQRTAEKWTLPSGAQWNN 289
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
KPR ++ AVIG G MG GI + L + + + V SE L ++T V G++ R
Sbjct: 290 SKPREIQSAAVIGLGTMGRGIVVS--LARVGISVIAVESEKKL--LETGRQMVIGMLER- 344
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+ + +L +LK L + KDVD+VIEAV E + LK++IF EL + C P +L +N
Sbjct: 345 DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPATLLCSN 404
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + + T + G HFFSPAHVM LLE+V R+S + I M++GK + KV
Sbjct: 405 TSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGKV 464
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V VGNC GF NR PY + A L+ G +ID A+ FG +G F+
Sbjct: 465 SVAVGNCPGFVGNRMLMPYLEQATFLLEEGATPQQIDKALEDFGFAMGVFR 515
>gi|148258278|ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146410451|gb|ABQ38957.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 697
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 289/525 (55%), Gaps = 13/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D + A + ++K IVLT G F G DI F
Sbjct: 10 HDIVGIVTIDSPPVNALSAAVRGGILDNVKAAIADPEIKVIVLTCGGRTFIAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A +L
Sbjct: 69 -----GKPPKPP--ALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKAGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +A + A +P +R L D KL + R + A K + + A D
Sbjct: 180 GAEAFARKVVAENRP-LRKLRDDDSKLAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVDR 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGVMQKNWEATAARGGIPADAPA 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLEHVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ +TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|296284660|ref|ZP_06862658.1| fatty oxidation complex, alpha subunit [Citromicrobium
bathyomarinum JL354]
Length = 678
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/526 (35%), Positives = 280/526 (53%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + AGL D EA S D V+A+V+ +G F G DI F
Sbjct: 10 HDNVLVIISDNPPVNALGQAVRAGLVDGISEALSDDSVEAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E KP+VAA+ G ALGGG E+A+ CH R+A P ++
Sbjct: 70 KPPQG--------PSLPEALDKLEASDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKM 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GTQRLPRLVG A+ ++ + I++++ ++GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRLVGAEAALPLVAIGNPISAKKAKEIGLLDELVGEDSL-- 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A + +P RS + ++ R + + A ++ +
Sbjct: 180 AADAIAFAKSKIGQPVPRSSEGDANQDGIRNP-DIFDEFRAKNGRKMRGFDAPNAAIEAV 238
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR--GVR 309
+ GV KE ++F +L+ S+ + H FFA+RA +KV DI P ++
Sbjct: 239 KAAGELSYAEGVKKERELFMKLMTGTQSKAMRHYFFAERAANKV---DDIPADPPLIDIK 295
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KV +IG G MG GIA + I V + E+ E L +G T+ N +G++T ++
Sbjct: 296 KVGIIGAGTMGGGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQV 355
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
A+ L L+YS+ D D+VIEAV ES+ +K+ +F +L+K ILA+NTS +D+N
Sbjct: 356 EQAMGHLTPTLEYSDLADCDLVIEAVYESMDVKKDVFGKLDKVVKQGAILASNTSYLDIN 415
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR E+T V+ M + K I KV V G C
Sbjct: 416 EIATATERPGYVLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVC 475
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G + + +D + FG P+GPFQ G
Sbjct: 476 PGFIGNRMLSKRQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMG 521
>gi|209516658|ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502933|gb|EEA02936.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 706
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 281/521 (53%), Gaps = 15/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADADQAVQAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPEVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G A++++L + +++E G+ID + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGMIDRLGDSGDILAE 187
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ ++ A P +R L + + + AR + K A + +D +E
Sbjct: 188 GLAYVHELLAAHAP-VRRTREATALTDRAASLAAVATAREETAKKARGLFSPLKIVDAVE 246
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
I G+ E K+F + + GL+H FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLKLERKLFLQCLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALDAIG 304
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+GGG MG+GIA A + + V + E + L +G I+ GL+ +G+LT ++
Sbjct: 305 VVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIDKVYDGLIAKGRLTAERKAAI 364
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ G Y VD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 365 MAGWSGSTSYDALAHVDLVIEAVFEDLDVKKAVFVELDRVCKPGAVLATNTSYLDIDAIA 424
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C GF
Sbjct: 425 ASVSRPADVIGLHFFSPANLMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVCDGF 484
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A L G ++ID+A+R+FG P+GPFQ
Sbjct: 485 IGNRLLAVYRAAADALTEDGASPYQIDAAVRAFGFPMGPFQ 525
>gi|449474245|ref|XP_004154116.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 327
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 206/315 (65%), Gaps = 46/315 (14%)
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML-------------- 164
CHAR++ QLGLPEL LG+IPGFGGTQRLPRLVGL KA+EMML
Sbjct: 1 ACHARLSTKTAQLGLPELQLGLIPGFGGTQRLPRLVGLPKALEMMLNSFNGHSYLLLISV 60
Query: 165 --------------LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRS 210
SK + EE + LGL+DA+ RRKPWI S
Sbjct: 61 PVSLNLSKLATLEQTSKPVKGEEAFSLGLVDAI------------------ERRKPWIIS 102
Query: 211 LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVF 270
LH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+ KE + F
Sbjct: 103 LHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDF 162
Query: 271 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 330
+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+
Sbjct: 163 QVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILS 222
Query: 331 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 390
N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY FKDVDM
Sbjct: 223 NYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDM 282
Query: 391 VIEAVIESVPLKQKI 405
VIEAVIE++ LKQ+I
Sbjct: 283 VIEAVIENISLKQQI 297
>gi|365891756|ref|ZP_09430138.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
gi|365332258|emb|CCE02669.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
Length = 697
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 289/525 (55%), Gaps = 13/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPAIKAIVLTCGGRTFIAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +P ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 69 -----GKPPKLP--ALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I++ E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPISAAEAHKAGLIEEIVEGPASGG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVER 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ +TS ++G HFFSPA+VM L EIVR ++T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|420251826|ref|ZP_14754984.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398056833|gb|EJL48814.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 706
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 284/517 (54%), Gaps = 11/517 (2%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVNAL + L+D + A DV A++L G G F GG DI F
Sbjct: 20 VVTVDNPPVNALGANVRRQLRDAIQAAEKDPDVDAVLLVGAGRNFIGGADIREF------ 73
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
G L P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLPE+
Sbjct: 74 GKPPLPP--SLPEVCNSIEACRKPVVAAIHGAALGGGLEVALAAHYRIALGAARLGLPEV 131
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
TLG++PG GGTQR PRLVG A+++ML + + ++E LGL+D V ++++L +
Sbjct: 132 TLGLLPGAGGTQRAPRLVGAKAALDLMLSGRHVGAKEAHALGLVDLVGETDDVLAEGFAY 191
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
+ + P +R D L + +R ++ AR + K + + +D ++ +
Sbjct: 192 VQALLDAQAP-VRRTRDADGLADRAASRANIEAARAETSKKSHGLFSPLKIVDAVQAALE 250
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 316
G+ E ++F + + GL+H F A+R K P + KPR + V V+GG
Sbjct: 251 LPFDDGLRHERQLFLQCLDSPQRAGLIHAFLAEREVLKAPETRNA--KPRKIASVGVVGG 308
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG+GIA A + + V + E + L +G+ IE L+ +G++T + L
Sbjct: 309 GTMGAGIAVAVLDAGLPVTMIERDDVSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARW 368
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
G Y D+VIEAV E + +K +F++L++ C P +LATNTS +D++ + S
Sbjct: 369 NGSTSYDALGTADLVIEAVFEEMTVKHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVS 428
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
++G HFFSPA++M LLE+V + SA V+ + K ++KVPV G C GF NR
Sbjct: 429 RPGDVVGLHFFSPANIMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNR 488
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
Y +A ++ G ++ID A+R+FG P+GPFQ
Sbjct: 489 VLAIYRAAADHMMEDGASPYQIDRAVRAFGFPMGPFQ 525
>gi|452749441|ref|ZP_21949203.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
gi|452006667|gb|EMD98937.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
Length = 701
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 302/528 (57%), Gaps = 14/528 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQAVRDGLLKAFQRAEADPQVRAVALMCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A +PDV + +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKSPQAPS---LPDV-----IEVIEVCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
++GLPE+ LG++PG GGTQRLPRL G++KA++M++ + I + E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMIVSGQPIGAAEAVEHNIVDELFD 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 244
E L + +A + + R+ +T L G+ +EA +++ + K P +
Sbjct: 176 GE-LREAGLAYARRMVDESRAPRRTGEQTQGLEGADNEA--LIRTKHAEVAKRMPGLFSP 232
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
C+ +E G+ +E ++F E + LVH FFA+R K+ N +K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKI-NDLPADVK 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++ AVIGGG MG GIA + + V L E+N + L +G++ V RG L
Sbjct: 292 PRPIKTAAVIGGGTMGVGIALSFANAGVPVKLLEINDDALQRGLQRARDTYAASVKRGSL 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
T++ L ++ GV DY+ DVD+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMAQRLALIAGVTDYAALADVDVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++DLN + T + ++G HFFSPA+VM LLE+V E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVHGEKTSHEVLATAMAIGKKLKKVSV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VVG C GF NR F Y + A L+ G ++D A+R+FG+ +GPF
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDGALRNFGMAMGPF 519
>gi|372278580|ref|ZP_09514616.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Oceanicola sp. S124]
Length = 697
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 290/534 (54%), Gaps = 27/534 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ EV D VA++ + NPPVNA + GL E + VKAI + G F G
Sbjct: 10 VSTEVVGD-VALVCIDNPPVNASGHAVRVGLVGAIEALNAEAAVKAIAIWCAGRTFMAGA 68
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K ++P+V N++E + P+VA + G ALGGG EL + HAR+A
Sbjct: 69 DIREFGK---PSKEPVLPEV-----YNILEASQIPVVAVMHGTALGGGFELGLAAHARVA 120
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+++GLPE+ +G++PG GGTQRLPRL G+ A++M L + ++ EE G ID VV
Sbjct: 121 IAGSKVGLPEVLIGLLPGAGGTQRLPRLAGVDFALDMSLSGRQVSVEEAQAAGAIDRVVE 180
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
V+ A ++ A P R+ T ++ + L R +K +P++
Sbjct: 181 GAPR-DVALAMAQEVVAGTLPTRRTSEITIEIDHTA-----LDGIRAATQKKSPHLVNPL 234
Query: 246 ACLDVI---EEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
C+D I ++ I G LK E + F + + GL+H FF +RA S +P
Sbjct: 235 KCIDAIAAADQPIAEG-----LKVERQCFLDCMETPQRAGLIHAFFGERAVSSIPEAKG- 288
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+ R ++ V VIGGG MGSGIATA +L + V L EV E L +G+ TI N+ G V+R
Sbjct: 289 --ETRDIQSVGVIGGGTMGSGIATACLLAGLPVTLVEVAQEGLDRGVATITKNLEGAVSR 346
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
GK++ K + AL L L DVD+VIEAV E + +K++IF +L+ C P +LA+
Sbjct: 347 GKMSAAKKDAALTSLTPALQLDALADVDLVIEAVFEDMGVKREIFGKLDAICKPGAVLAS 406
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D+N + TS ++G HFFSPAHVM LLEIV+ E+T+ V+ + K +KK
Sbjct: 407 NTSYLDVNEIASCTSRPGDVLGLHFFSPAHVMRLLEIVQGEQTAPDVLATGFALAKRLKK 466
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
V V+ C GF NR Y+ + LV G ++D+A+ FG +GP + G
Sbjct: 467 VGVLAQVCDGFIGNRILAHYALCSGYLVLDGASPAQVDAALEGFGFAMGPHKVG 520
>gi|367472156|ref|ZP_09471747.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
gi|365275555|emb|CCD84215.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
Length = 698
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 284/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPTIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPPKP--------PALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKSGLIEEIVEGPASGG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
V +A + A +P + K+ + R + A K + + A D +
Sbjct: 182 VE--FARKVVAENRPLRKLRDDESKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ +E + F +LV D S+ + FFA+R +K+ +V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKREREGFLKLVASDQSKAQRYAFFAEREAAKIASVPE-GTKGRKVERV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDAI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|399993437|ref|YP_006573677.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657992|gb|AFO91958.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 706
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 279/524 (53%), Gaps = 19/524 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GVA I L P VNAL + + L E + + VKAIVL F GG DI F
Sbjct: 7 TEGVAFIELNAPSVNALGLKMRQVLSSAIHELDADEQVKAIVLCSALPLFCGGADIVEF- 65
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ D +PD+ V +IE KKPI+AA+ G A+GG LE+A+ C R+A P +
Sbjct: 66 RTGAVWDKPDLPDLCV-----MIETSKKPIIAAIAGPAMGGALEIALACDYRVATPDAVM 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR+ GL A +M+L + E GL+DA+ +++ +
Sbjct: 121 GLPEIKLGLLPGAGGTQRLPRIAGLEAATQMILSGDPVKGEYALSCGLVDALFENDQDFR 180
Query: 192 VSRL-WALDIA----ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
L +A ++ +R ++ D G L+ R+ Q T+ N+ +
Sbjct: 181 AHVLGFATRVSHEGDPKRSCADMTVRHPDPKGYLTGFRD-------QIAHTSKNLVAPER 233
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
CL IE G+ +E F EL+ SR H+FFA+R +KVP VT +PR
Sbjct: 234 CLVSIEAACEMPLAEGLEQEKAGFAELLDTPQSRAGRHLFFAERECTKVPGVTRAD-RPR 292
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ VAVIG G MG GIA A + V L E L +G++ + + + +G+L+
Sbjct: 293 DIASVAVIGAGTMGRGIAIAFLQAGYPVTLLETTQGALEQGLEKVREHFQRAAQKGRLSA 352
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
D+A G L Y+ D++IEA ES+ +K++IF L+ P ILA+NTST+
Sbjct: 353 DRAEAISANATGTLSYAGLAKADLIIEAAFESMNVKRQIFEALDLHAKPGAILASNTSTL 412
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
DL+ + TS + +IG HFFSPA+VM LLE+VR +T+ VI +TV K I+K+PV V
Sbjct: 413 DLDEIATVTSRPEDVIGLHFFSPANVMRLLEVVRGAKTAPDVIATAITVAKKIRKLPVTV 472
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
G C GF NR PY + L+ G ++D + FG+ +G
Sbjct: 473 GVCYGFVGNRMLEPYFREGSRLLLEGATPKQVDDVLEGFGMAMG 516
>gi|84500553|ref|ZP_00998802.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
gi|84391506|gb|EAQ03838.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
Length = 699
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 287/523 (54%), Gaps = 21/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNA + + AGL+D F + KAI L G F G DI F
Sbjct: 19 VALVCVDNPPVNATGVAVRAGLQDAFRKINEEGKAKAIALYCAGRTFIAGADIREF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ V++ +E P V+ + G ALGGG E A+ HAR+ + GLP
Sbjct: 75 --GQPPKAPGLTE--VLSEMEQSAIPTVSIIHGTALGGGYETALATHARVGMKGAKFGLP 130
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL G++ A+++ + + + EEG + G ID VV + + +++
Sbjct: 131 EVLLGILPGAGGTQRLPRLSGIAYALDIAVSGRHVPVEEGVEKGAIDRVVEAGDPREIAI 190
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
++ A P RTD+L + ++ V + + KK P++ C+ I
Sbjct: 191 AMGQEVVAGTLPT----RRTDQLQAQADDAAVQQTLEMVQKKN-PHLINLAECVKAIAAS 245
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G+ E + F LV +++ + GL+H FF +RA S +P + R + K+
Sbjct: 246 -TKPIDEGLAAEREHF--LVCMNSPQRSGLIHAFFGERAVSNIPEAKG---ETRSLDKIG 299
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MGSGI T+ ++ I V L EV E L +G+ TI N+ G ++RGK+T DK + A
Sbjct: 300 VIGGGTMGSGITTSCLMAGIPVRLIEVQQEGLDRGVATITKNLDGALSRGKMTSDKRDAA 359
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ML+ L+ + DVD+VIEAV E + +K+ IF +L C P ILA+NTS +D++ +
Sbjct: 360 LAMLEPSLNMEDLSDVDLVIEAVFEKMEIKKDIFGKLNTICKPGAILASNTSYLDIDKIA 419
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPAHVM LLEIV+ E+T+ + + K +KKV V+ C GF
Sbjct: 420 ATTDRPQDVLGLHFFSPAHVMRLLEIVQGEKTAPDALATGFALAKKLKKVGVLAQVCDGF 479
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y + LV G +D+A+ +FG+ +GP + G
Sbjct: 480 IGNRILGHYGKVISYLVLDGASPAEVDTALENFGMAMGPHKVG 522
>gi|443718591|gb|ELU09144.1| hypothetical protein CAPTEDRAFT_144302 [Capitella teleta]
Length = 713
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 293/533 (54%), Gaps = 33/533 (6%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
+ DGVA++ + NPPVNAL+ + +++ ++A +K+IV++G G F G DI
Sbjct: 5 IARDGVALLQVNNPPVNALSHHVRVAIEEGLKKAGQDPRIKSIVISGKGS-FIAGADIK- 62
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
DVS P + +EL +LIE KP+VAA++G ALGGG E+A+ CH RIA K+
Sbjct: 63 --------DVS-KPTI-LELC-DLIESSGKPVVAAIKGFALGGGHEIAISCHYRIAHEKS 111
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS--- 186
+ G PE+ +G++P GGTQR PRLVGL A++++ + I + + +KLG++D VV
Sbjct: 112 KFGFPEVDIGILPAAGGTQRFPRLVGLEAALDLIPSGRHIGAAQAFKLGIVDKVVRGDAV 171
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
EE +K ++ A + R RT + + L A A K M
Sbjct: 172 EEAVKFAKSIAGEPLVDR--------RTSQRPVMGAENAFLAAAVKLAMKKKKGMIAPIV 223
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR---GLVHVFFAQRATSK--VP-NVTD 300
CL V G + G+ EA E V++ TS L + FFAQRA K +P +
Sbjct: 224 CLSVSFMGSLLPFEQGIQVEAA---EAVVVFTSGQMGALQYAFFAQRAAPKWLLPCGASF 280
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+K R +R AVIG G MG+GI A + I V L E + ++L KG+ ++ G V+
Sbjct: 281 KTVKGRPIRNAAVIGAGTMGTGITMAMLNAGIPVTLVEQDRKFLDKGVSLLKLLYAGSVS 340
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
K+TQD+ + L L + Y +VD+VIEAV E++ LK++IF+EL++ CPP L
Sbjct: 341 LRKITQDQCDAILSKLNTAVGYKSLTNVDLVIEAVYENMALKKQIFAELDRICPPETFLW 400
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + T D+++G HFF PA+ M LLE VR + TSA+ + G I
Sbjct: 401 TNTSALDIDEIASATRRPDKVLGTHFFVPAYHMKLLENVRGKLTSAETVASAQMFGTRIG 460
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PVVVGNC GF NR Y A L+ G +D +FGLP+GPF+
Sbjct: 461 KIPVVVGNCHGFVGNRMLHKYVYEADFLIEEGCWPEDVDMVAENFGLPLGPFK 513
>gi|421747817|ref|ZP_16185486.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
gi|409773513|gb|EKN55297.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
Length = 693
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 284/521 (54%), Gaps = 13/521 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
G+A++T+ +PPVNAL+ + AG+ ++A + D VKAIVLT G F G DI F K
Sbjct: 15 GIAVLTIDSPPVNALSANVRAGILAGVKQAVADDAVKAIVLTCAGKTFIAGADITEFGKP 74
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+P+V IED KP++AA+ G ALGGGLE+A+ CH R+AA + GL
Sbjct: 75 PTG---PALPEVQAA-----IEDAPKPVIAAIHGTALGGGLEVALVCHYRVAARSAKCGL 126
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPR+VG+ KA+EM+ + + ++GL+D + L +
Sbjct: 127 PEVNLGLLPGAGGTQRLPRIVGVEKALEMVTSGTHVPAPAAAEMGLVDLLTDDASLRADA 186
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + +P + DK+ + E+ R + + + IE
Sbjct: 187 IAFARQVVGEGRPLRKVRDLDDKIAAARGKPEIFAEFRRANARRFRGFDAPEYNIRCIEA 246
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
+ G+ +E +F EL+ S + FFA R ++P++ D L P VR+V
Sbjct: 247 AVELPFDEGLKRERAMFVELLNGTQSAAQRYYFFASRQVWQLPDIDADTPLLP--VRQVG 304
Query: 313 VIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
+IG G MG GIA + LN Y V + E + + L +G++TI N +G++T +
Sbjct: 305 IIGAGTMGGGIAM-NFLNAGYPVTIVETSQQALDRGVRTIRTNYENTAKKGRITATDIEH 363
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +L L+ + D D+VIEAV E++ +K+ +F L++ P ILATNTS +D++ +
Sbjct: 364 RMALLTPTLEMEKLADADLVIEAVFENMDVKKDVFGRLDRIAKPGAILATNTSALDVDEI 423
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
TS + +IG HFFSPA+VM LLE+VR RT+ VI M + + I K+ +VG C G
Sbjct: 424 AAATSRPESVIGLHFFSPANVMKLLEVVRGARTAKPVIRTSMELARKIGKIAALVGVCPG 483
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + A+ LV G + +D A+ FG P+GPF
Sbjct: 484 FVGNRMLAQRQREAQKLVLEGALPWDVDRALYEFGFPMGPF 524
>gi|327267366|ref|XP_003218473.1| PREDICTED: peroxisomal bifunctional enzyme-like [Anolis
carolinensis]
Length = 729
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 275/512 (53%), Gaps = 23/512 (4%)
Query: 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91
+ L+ +A S VKA+V+ G G+FS G DI F + G S S+E VV
Sbjct: 32 VTQALERDVNQANSDPTVKAVVICGANGKFSAGADIRNFANI-GQSKFS-----SLESVV 85
Query: 92 NLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151
+LIE KP+VAA+E LA GGGLE+A+GCH RIA K ++GLPE+T+G++PG GGTQRLP
Sbjct: 86 SLIEKSDKPMVAAIEDLAFGGGLEIALGCHYRIANMKARVGLPEVTIGLLPGAGGTQRLP 145
Query: 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 211
RL+G+ AI+++ + + + E KLG++D VV + L P L
Sbjct: 146 RLIGVPAAIDIITTGRHVPATEALKLGILDEVVEENPIEAAINLAQRVTGQPLGPRRLCL 205
Query: 212 HRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 271
KL ++ L ARL+ KK A Q C + + + G+ KE ++F
Sbjct: 206 KEVPKLPNM---EAFLDEARLKVKKRANGQLSPQMCFEAVRASVYLPFAEGIQKEKQLFM 262
Query: 272 ELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPRGVRKVAVIGGGLMGSGIATAHI 328
L+ S+ L + FFAQRA K +PN G P+ V+K AVIG G MG GI + +
Sbjct: 263 YLLSSGQSKALQYAFFAQRAMEKWVLPNGASWGTADPQPVKKAAVIGLGTMGRGIVASLL 322
Query: 329 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-----LDYS 383
I VV E + + L G +A V L+ R L + N K K + LD+
Sbjct: 323 KAKIPVVALEQDKKQLEVG----KAAVMALLEREALKMHQ--NGQKPKKPIVPHFTLDFG 376
Query: 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 443
KDVD+VIEAV E + LK++IF +L C P +L TNTS +D++ + T ++IG
Sbjct: 377 ALKDVDLVIEAVFEEIALKKEIFHKLSVICKPEALLGTNTSYLDIDEIASVTDRPHKVIG 436
Query: 444 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 503
HFFSPAH+M L+EI+ ++TS I M++ K + K+ VVVGNC GF NR Y
Sbjct: 437 IHFFSPAHIMKLVEIIYGQQTSPSAIATAMSLAKSMGKIGVVVGNCFGFVGNRMLTHYYD 496
Query: 504 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
A L+ G +D ++ FG +GP + G
Sbjct: 497 QAYFLIEDGSTPEEVDKVLQEFGFKMGPLRVG 528
>gi|456358170|dbj|BAM92615.1| 3-hydroxyacyl-CoA dehydrogenase [Agromonas oligotrophica S58]
Length = 697
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 285/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D A + +KAIVLT G F G DI F
Sbjct: 10 HDIVGIVTIDSPPVNALSAAVRGGILDNVNAAIADPAIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP--------KPPALNDVLSAIENSPKPVIAAIHGTALGGGLEVALACHYRVATKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ ++ E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKSGLIEEII--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A + A +P + K+ + R + A K + + A D +
Sbjct: 180 GGEAFARKVLAENRPLRKLRDDESKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVERV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGVPVTLIETAEEQLRRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D++IEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGLENVGDADLIIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDDI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
++TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AKQTSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|83859319|ref|ZP_00952840.1| fatty oxidation complex, alpha subunit [Oceanicaulis sp. HTCC2633]
gi|83852766|gb|EAP90619.1| fatty oxidation complex, alpha subunit [Oceanicaulis alexandrii
HTCC2633]
Length = 680
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 198/525 (37%), Positives = 288/525 (54%), Gaps = 20/525 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV +I NPPVNAL+ + +GL D A S VKA+V+ +G F G DI F
Sbjct: 8 TDGVLVIVSDNPPVNALSHAVRSGLMDAVTAAGSDAAVKAVVIAADGRTFHAGADITEFG 67
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P S L V+ IE KP+VAA+ G LGGGLE+A+G H R+AA +
Sbjct: 68 K----------PPQSPSLPEVIEAIEALDKPVVAALHGTTLGGGLEVALGAHYRVAARGS 117
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+ LG++PG GGTQRLPR+VG+ A+EM+ I++E+ LGL+D +V +++L
Sbjct: 118 KLGLPEVKLGLLPGAGGTQRLPRVVGVEAALEMIAKGDPISAEKAQSLGLVDELVEADKL 177
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ + + P R+ RTDKL + +E A+ A++ M QAC++
Sbjct: 178 -RDAAIAFARARIADGPR-RTGARTDKLSADAEVFHAF--AQKNARRFR-GMDAPQACIE 232
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG-V 308
++ G+ E ++F +L+ D S L H+FFA+RA +K+ ++ PR V
Sbjct: 233 AVKAATEKPLSEGLKLERELFTKLMTGDQSAALRHLFFAERAAAKIDDIAKD--TPRKTV 290
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
V VIG G MG GI + I V L E L +G+ TI N +G+L+QD+
Sbjct: 291 SSVGVIGAGTMGGGITMNFLSAGIPVTLVEREQAALDRGVATIRKNYEASAAKGRLSQDQ 350
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A+ +L L+ D D++IEAV E + +K++IF+ L+ ILATNTS +D+
Sbjct: 351 VEKAMALLTPTLEMDALSDCDLIIEAVFELMRIKKEIFTALDSIAKKDAILATNTSYLDV 410
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + T + ++G HFFSPA++M LLEIVR +T+ V+ M + + I KV VV G
Sbjct: 411 NEIAAVTQRPESVLGLHFFSPANIMKLLEIVRGAKTADTVLATAMDLSRRIGKVAVVAGV 470
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR A L+ G + +D + FGLP+GPFQ
Sbjct: 471 CHGFIGNRMLAQRQAEANSLILEGAKPWDVDRVLVEFGLPMGPFQ 515
>gi|407937505|ref|YP_006853146.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407895299|gb|AFU44508.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 706
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 283/524 (54%), Gaps = 22/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNAL + GL ++A + V A++L G G F G DI F K
Sbjct: 19 VLVVTIDNPPVNALGAAVRQGLLAAMQQAQADAAVTAVLLVGAGKAFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V+ L V IE+ KP+VA + G ALGGGLE+A+ H R+A P LG
Sbjct: 77 --------PPVTPILPEVCRAIENLNKPVVAVLHGAALGGGLEVALSAHYRLALPAATLG 128
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR PRL+G+ A +ML + + ++ + GL+D +V + L
Sbjct: 129 LPEVNLGLLPGSGGTQRAPRLMGVQAATTLMLSGQPLKAQAALQAGLVDKLVEGTDPLAA 188
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ ++ A + P + RT L +++E + L Q +TA + L +IE
Sbjct: 189 GLAYVRELLAAQAP----VRRTRDL-AIAEPQAALAWLEEQKTETAKKSRGLFSPLKIIE 243
Query: 253 --EGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + + G+ +E +F E + GL+H FFA+R KVP +PR V
Sbjct: 244 CVQAALQLPFDEGMARERALFMECLDSPQRAGLIHAFFAEREVVKVPEAQ--AAQPRPVA 301
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+AVIGGG MG+GIA A + + V + E ++E + +G +E LV +G++T
Sbjct: 302 SIAVIGGGTMGAGIAVAALDAGLPVTMIERDAESIARGRANVEKVYNALVAKGRMTDAAK 361
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y++ VD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++
Sbjct: 362 VAVMARYTGSTSYADIAQVDLVIEAVFEDIEVKKTVFRELDRVCKPGAVLATNTSYLDID 421
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T +IG HFFSPA++M LLEIV + + V+ + + +KKVPV G C
Sbjct: 422 AIAAATGRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVATAFELARKLKKVPVRAGVC 481
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y Q+A L+ G + ID+A+R FG +GPFQ
Sbjct: 482 DGFIGNRILAVYKQAADYLLEDGASPYEIDAAVRGFGFAMGPFQ 525
>gi|260431228|ref|ZP_05785199.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415056|gb|EEX08315.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
Length = 698
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 282/521 (54%), Gaps = 22/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + + GL E A S + KA+++ G G + G DI F K
Sbjct: 13 IAVLAANNPPVNALGVDVRRGLLAGIERAES-EGAKAVLIYGKGRTYFAGADIREFGK-- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P + + IE +V+A+ G ALGGGLE+A+ H RIA P ++GLP
Sbjct: 70 -PPQEPWLPGL-----CDRIEASPLLVVSALHGTALGGGLEVALSSHYRIAVPSAKVGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLKV 192
E+ LG++PG GGTQRLPR+ G+ A++M+ + + ++E KLG+ID V + E+
Sbjct: 124 EVNLGILPGAGGTQRLPRVAGVEAALDMITTGRHVRADEALKLGVIDKVQDGDPREIGLA 183
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
LD A R+ + + D + + VLK R Q AC
Sbjct: 184 YAQELLDTGAPRRA-VGEMPAPDPVDFDAVYEAVLKKGRGQLSPAVAVRAVQAACE---- 238
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G+ +E ++F +L+ D +GL+H FFA+RA K+P + G++PR V ++
Sbjct: 239 ---APSFAEGMARERELFMQLMESDQRKGLIHAFFAERAVGKLPELK--GVEPRPVHQIG 293
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIGGG MG+GIATA +L + V L E+ E I N+ G + RGK++Q + +
Sbjct: 294 VIGGGTMGAGIATAALLAGLPVTLLEMTQEAAHAAKDRIAGNLAGALKRGKISQQQHDAI 353
Query: 373 LK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L L+ Y VD+VIEAV E + +K+++F++L+ C P +LATNTS +D+N +
Sbjct: 354 LSDQLQLATGYDALSAVDLVIEAVFEDMDVKKQVFAQLDAVCKPGAVLATNTSYLDVNEI 413
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T+ +IG HFFSPAHVM LLEIV ++T+ +V+ +G +KKV V G C G
Sbjct: 414 AAATTRPQDVIGLHFFSPAHVMKLLEIVVADKTAPEVVATGFALGHRLKKVSVRAGVCDG 473
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR Y A +V G F+ID A+ FG +GPF
Sbjct: 474 FIGNRILSTYRTCADHMVLDGASPFQIDKALTDFGFAMGPF 514
>gi|301630327|ref|XP_002944273.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 1251
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 284/519 (54%), Gaps = 17/519 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I + NPPVNAL+ P V GL + +RDD+ A+VL G G + G DI F
Sbjct: 570 IGLIAIDNPPVNALSTPAVEGLTAALAQFEARDDLDALVLYGLGRTWIAGGDITAFDSPA 629
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P + + +E +P+V A+ G ALGGGLELAM CH R+A P T++GLP
Sbjct: 630 G------FPVAAFNAFLERLEAQNRPVVVALHGTALGGGLELAMACHWRVAQPGTRVGLP 683
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 193
E+ +G+IPG GTQRLPRL G + A++++ + + + + + GLIDA+ E ++ ++
Sbjct: 684 EVKIGIIPGSLGTQRLPRLAGGTLALDLITSGRMVGAAQAHQAGLIDALAEGEPRVIGIA 743
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
AL + + L R +L + E L A A + P PQ A + +
Sbjct: 744 AAQALLQSGQ------PLRRASQLTAAPAPAEALAKAEATAAQK-PGWPQLAAAVRCVRA 796
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G EA F +LV +++ L H+FFA+R +K+ + D L+P +RKV
Sbjct: 797 AQALPFVQGQAVEAAEFAQLVTSPSAKALRHLFFAEREVAKISALPCDTALRP--IRKVG 854
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
++G G MG GIA I V+ EVN E L +G+ + N +G+LT ++
Sbjct: 855 IVGAGTMGGGIAMNFANVGIPTVVVEVNDETLQRGLGLVRRNYEASAAKGRLTAEQVAGR 914
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L+G LDY+ + D+VIEAV E++ LKQ I ++L P I+ATNTST+D++++
Sbjct: 915 MALLQGALDYAALAECDLVIEAVFENMALKQDICAKLGAVAKPGAIIATNTSTLDVDVLA 974
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPAHVM LLE+VR T+ V+ +M + I KVPVV G C GF
Sbjct: 975 RATGRSADVVGMHFFSPAHVMRLLEVVRGAATAPDVLATIMKLAARIGKVPVVSGVCYGF 1034
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
NR Y + A L+ G + ++D+A+ + G +GP
Sbjct: 1035 IGNRMAEVYMREAEFLIMEGAEPAQVDAAVEALGFAMGP 1073
>gi|359795628|ref|ZP_09298244.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
gi|359366313|gb|EHK67994.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
Length = 733
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 277/517 (53%), Gaps = 10/517 (1%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++ + +PPVNAL+ + L + EA + V+AI+L G G F G DI F K
Sbjct: 47 VVVIDHPPVNALSAAVRRDLSNAIAEAQTDTRVRAILLMGAGKNFIAGADIREFGKPP-- 104
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
L+PD+ N IE KP++AA+ G ALGGGLE+AM H R+A +LGLPE+
Sbjct: 105 -QQPLLPDL-----CNQIEASAKPVIAALHGAALGGGLEIAMAAHYRVALAGAKLGLPEV 158
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
LG++PG GGTQR PRL+G A+++ML K ++++ GL+DA+ + E+ L +
Sbjct: 159 NLGLLPGAGGTQRAPRLMGAQAALDLMLTGKHLSADAALAAGLVDALASEEDPLDAGLAY 218
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
+ A R+ D L + A + TA + + + I
Sbjct: 219 TRQLLALNAGPRRTRDAADALSDRQAQLAAVDAAAERIATTARGLFSPARIVQAVRAAIE 278
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 316
G+ E +F + + LVH FFA+R T+K+P + + + R + +V ++GG
Sbjct: 279 QPFDEGLRTERALFLQCLDSPQRAALVHAFFAERETAKIPELKEA--RARRLERVGIVGG 336
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG+GIA A + + VV+ E + L +G +E LV +G+++ D+ L
Sbjct: 337 GTMGAGIAVAVLDAGLPVVMVEQDDAALARGRARVEQVYDLLVKKGRISSDERAARLARF 396
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
G +Y + D++IEAV E + +KQ +F++L++ P +LATNTS +D+N + E T
Sbjct: 397 TGATNYDALGEADLIIEAVFEDMAVKQAVFAQLDRVAKPGAVLATNTSYLDVNQIAEATR 456
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
++G HFFSPA++M LLE+V T+ + + + ++K PV G C GF NR
Sbjct: 457 GPADVLGLHFFSPANIMKLLEVVVGRHTAPDTVATGFELARRLRKTPVRAGVCDGFIGNR 516
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ Q+A +++ G + ID+A+R+FG P+GP+Q
Sbjct: 517 ILAVHRQAADMMMEDGASPYDIDAAVRAFGYPMGPYQ 553
>gi|146338085|ref|YP_001203133.1| enoyl-CoA hydratase [Bradyrhizobium sp. ORS 278]
gi|146190891|emb|CAL74896.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 278]
Length = 697
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 286/525 (54%), Gaps = 13/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPAIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPPNP--------PALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKSGLIEEIVEGPASGG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R + +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKIER 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ +TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|254463027|ref|ZP_05076443.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium
HTCC2083]
gi|206679616|gb|EDZ44103.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium
HTCC2083]
Length = 711
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 282/524 (53%), Gaps = 28/524 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + +GL E A S + KA+++ G G + G DI F K
Sbjct: 28 IAVLRANNPPVNALGHAVRSGLIAGLERAES--EAKAVLIVGAGRTYFAGADIKEFGKP- 84
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + + V IE P+++A+ G ALGGGLE+A+G H RIA P ++GLP
Sbjct: 85 -------LLEPGLPGVCTRIERSPLPVISAIHGTALGGGLEVALGTHYRIAVPSAKVGLP 137
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE----ELL 190
E+ LG++PG GGTQRLPRLVG KAIEM+ + +++ E +LG++D V E L
Sbjct: 138 EVHLGILPGAGGTQRLPRLVGADKAIEMITSGRHVSAPEALELGILDEVEEGEVEAIGLA 197
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
R+ LD +P + + R + + + +K R Q AC
Sbjct: 198 YAQRI--LDAGLGPRP-VGQMPRPEVVDFDTAYEAAMKRGRGQIAPATAIRSIEGACHKG 254
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
I+ G+ H E +F L+ G+VH FF +RA SK+P + G+ PR V
Sbjct: 255 IDAGLEH--------ERNLFMALLNSPQREGMVHAFFNERAVSKLPELK--GVAPREVSA 304
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ VIGGG MG+GIA A +L+ + V + E +++ G + + ++G V RGKLT +K +
Sbjct: 305 IGVIGGGTMGAGIAVAALLSGLDVTMIERDADAAKAGAERVSDILQGSVKRGKLTNEKFD 364
Query: 371 NALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ + Y D D+VIEA E + +K+ IF+EL++ C +LA+NTS +D+N
Sbjct: 365 AIMAGRFRASDSYEALGDADLVIEAAFEEMGVKKTIFAELDRVCKKGAVLASNTSYLDVN 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ TS ++G HFFSPAHVM LLEIV T+ V+ +GK+++K+ V G C
Sbjct: 425 EIAASTSRPADVLGLHFFSPAHVMKLLEIVVAADTAPDVVATGFALGKMMRKIAVRSGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y A +V G F ID+A+ +FG +GPF+
Sbjct: 485 DGFIGNRILKTYRTCADHMVLDGASPFEIDTAMTAFGFAMGPFE 528
>gi|390576846|ref|ZP_10256891.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389931084|gb|EIM93167.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 707
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 192/519 (36%), Positives = 271/519 (52%), Gaps = 11/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ NPPVNAL + + GL E A + V+A+++ G G F G DI F K
Sbjct: 19 ILLVTIDNPPVNALGVDVRRGLVAAIEAAEANQAVRAVLIVGAGRNFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV N IE C KP+V A+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 77 -PPQTPTLPDV-----CNRIETCDKPVVVAIHGAALGGGLEIALASHYRIAVAGAKLGLP 130
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR PRL+G A+ +ML K I +E K+GL+D V S+++L
Sbjct: 131 EVLLGLLPGAGGTQRAPRLIGAEAALSLMLSGKHIGEQEALKIGLVDRVGQSDDVLAEGL 190
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ + P +R L A + AR K + + +D +E
Sbjct: 191 AYVQQLLVEHAP-VRRTRDAQALSDKEAATAAVTTARADTAKKSRGLLSPLKIVDCVEAA 249
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ G+ E K F E + LVH F A+R K P +PR + V+
Sbjct: 250 LNLPFDDGLRFERKQFLECLDSPQRAALVHAFQAEREVQKAPETRRA--QPRPIASAGVV 307
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA A + + V + E + E L +G IE GL+ +G+LT D L
Sbjct: 308 GGGTMGAGIAVALLDAGLPVTMIERDDESLARGRAHIEKVYDGLIAKGRLTSDAKAKKLA 367
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
G Y DVD+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 368 RFIGSTSYEALADVDIVIEAVFEDMAVKQAVFAELDRVCKQGAVLATNTSYLDIDAIAAS 427
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
S +IG HFFSPAH+M LLE+V SA V+ + K ++KVPV G C GF
Sbjct: 428 MSRPQDVIGLHFFSPAHIMKLLEVVVPAHVSADVVATSFDLAKKLRKVPVRAGVCDGFIG 487
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A L+ G ++ID A+R FG P+GP+Q
Sbjct: 488 NRMLAVYRAAADHLMEDGASPYQIDKAVREFGFPMGPYQ 526
>gi|33603778|ref|NP_891338.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella bronchiseptica RB50]
gi|33577903|emb|CAE35168.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica RB50]
Length = 705
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 279/522 (53%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 251 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|90417373|ref|ZP_01225298.1| fatty oxidation complex, alpha subunit [gamma proteobacterium
HTCC2207]
gi|90330815|gb|EAS46084.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2207]
Length = 704
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 289/531 (54%), Gaps = 14/531 (2%)
Query: 3 APRVT-MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
+P VT EV D + II + NPPVNAL+ + G+ A D KA++L G F
Sbjct: 5 SPSVTSYEVRGD-IGIIWINNPPVNALSQALRDGIYAAVN-AAQDDATKALILICKGRTF 62
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI+ F K + S V+ IE KP+VAA+ G ALGGGLE A+ CH
Sbjct: 63 IAGADISEFDKAP--------TEPSFNQVLATIEQSSKPMVAAIHGTALGGGLETALACH 114
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
R A +GLPE+ LG++PG GGTQR PRL G+ AI+++ I ++ L LID
Sbjct: 115 YRCAVSTAMVGLPEVKLGLLPGAGGTQRAPRLTGVEAAIKLITSGNPIKAKAAVGLNLID 174
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
++ ++LL+ + + + A + P ++ T S A + +R Q + A
Sbjct: 175 HIIDGDDLLEGALAYTQQLLADKAPLLKVRDITIDPASFDPA--IFDQSRKQLSRRARGQ 232
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
Q +D IE G+ E ++F +L S + H+FFAQR +K+ +
Sbjct: 233 LAPQRIVDCIEAAATTSFDEGLATEGRLFMDLKDDSQSAAMRHMFFAQREANKIKGIGKE 292
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+K R ++ VA+IGGG MG GIA I V + E+N E L +G+ I+ N V +
Sbjct: 293 TVK-RPIQSVAIIGGGTMGGGIAMNFANVGIPVTMLEINDEALQRGLGIIDKNYSMTVKK 351
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G+L++++ + + ++ G DY + D+VIEAV E++ +KQ++F++L+K C P ILA+
Sbjct: 352 GRLSEEQKHGCMSLISGTTDYQDLATADLVIEAVFENLEIKQQVFAKLDKVCKPGAILAS 411
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS D+N + T + +IG HFFSPA++M LLEIVR ++TS +VI M V K I K
Sbjct: 412 NTSYQDVNAIAAATQRPEDVIGLHFFSPANIMKLLEIVRADKTSDEVIATSMAVAKAIGK 471
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
VPV+ G C GF NR F Y + +L + G +ID + +G+ +GP
Sbjct: 472 VPVLSGVCFGFIGNRMFSEYGRETQLCLIEGASAEQIDRVMEDYGMAMGPL 522
>gi|77458979|ref|YP_348485.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fluorescens Pf0-1]
gi|77382982|gb|ABA74495.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 703
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 289/527 (54%), Gaps = 22/527 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A+I L PVNAL + A L D E A + V A++L G G FS G DI F
Sbjct: 11 DGLALIGLDRAPVNALDQTLRAALIDACERAATDIAVGAVILYGVQGLFSAGTDIKEF-- 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + + + ++ + KP++AA+ ALGGGLELA+ C RI AP +LG
Sbjct: 69 ----GTEACFAEPDLPGILTRLSALHKPLIAAIGTFALGGGLELALACGYRIGAPDARLG 124
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLK 191
L E+ LG++PG GGTQRLPRL+G A+ ++L + I +E LG++D + +S E+LL+
Sbjct: 125 LSEINLGLMPGAGGTQRLPRLIGAESALNLILSGEQIDAERARMLGILDRISSSTEQLLE 184
Query: 192 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM---PQHQ 245
+R +A ++ A +P + + L AR ++ + AP +
Sbjct: 185 EARAYANELIECCAPARPAEAWPNPAEDLPDDFLARYRVEHEPRWKSRLAPRLVLSALEA 244
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
ACL +EEG+V +E +FK+ S+ L HVFFA++ + P + D
Sbjct: 245 ACLLPLEEGLV--------RELTLFKQAEASRQSKALRHVFFAEQDARRTPRI-DTADPS 295
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + KVAVIG G +G GIA + I V L +++ L +G+K + N + V RGKL+
Sbjct: 296 RKINKVAVIGAGTLGGGIAMSFADVGIPVALMDLDGRTLDRGLKRVRENYQLSVKRGKLS 355
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ +++L G LDY++ D D++IEAV E + K ++F LE C P ILATNTS+
Sbjct: 356 AVQMQQRMELLFGTLDYADLSDADLIIEAVCEKMESKHQVFLALESVCKPGAILATNTSS 415
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + + S +IG HFFSPA+VM L+EIV + T+ V+ +M + + I K+PV+
Sbjct: 416 LDIDALAKMVSRPQDVIGMHFFSPANVMRLVEIVLCQTTAPDVVTAVMDIARRIGKLPVI 475
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GN G NR PY++ A LV G ++D+ + S L +G F
Sbjct: 476 SGNSAGSIGNRMLEPYAREAHRLVLEGATPVQVDAVLTSLDLNMGVF 522
>gi|365883354|ref|ZP_09422509.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
gi|365288201|emb|CCD95040.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
Length = 697
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 287/525 (54%), Gaps = 13/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + I+T+ +PPVNAL+ + G+ + A +KAIVLT G F G DI F
Sbjct: 10 HDIIGIVTIDSPPVNALSAAVRGGILGNVKAAIEDPTIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPPKP--------PALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATRDSKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I++ E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPISAAEAHKSGLIEEIVEGPASGG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVER 297
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ +TS ++G HFFSPA+VM L EIVR ++TS ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRADKTSPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|407775890|ref|ZP_11123181.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
gi|407280962|gb|EKF06527.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
Length = 653
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 304/529 (57%), Gaps = 20/529 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ + N +A+IT+ NPP+NA + + +G+ D ++ DD++A +L +G F G
Sbjct: 4 VTLTLEN-AIAVITINNPPINATSHAVRSGIVDALDQIDGNDDIRAAILICDGKTFIAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
D++ F + A ++PDV + IE KP +AA+ G ALGGGLE+A+GCH RIA
Sbjct: 63 DVSEFGQPPKA---PILPDV-----IKRIEAATKPFIAAIHGHALGGGLEVALGCHYRIA 114
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+LGLPE+ LG+IPG GGT RLPRL+ +S+A+ M+ K I++ + ++GL+DA+ T
Sbjct: 115 DSTAKLGLPEVNLGLIPGAGGTTRLPRLIPVSEAVSMITSGKPISATKANEIGLLDAI-T 173
Query: 186 SEELLKVSRLWALDIAARRKP-WIRSLHRTDKLGSLSEAREVLKLARLQAK-KTAPNMPQ 243
L +R +A I +R P W+ + D S ++ ++ + +A+ + AP
Sbjct: 174 HGALGDAARDFAKTILSRGTPAWLLARDPIDAPSS-AQWDDITSATKKKARGQVAP---- 228
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
A + I GI HG +G+ E + F EL D S+ L H+FFA+R+ +K+P + G+
Sbjct: 229 -LAAISAIRNGIEHGPDAGLDFEREKFIELRDSDQSKALRHIFFAERSVAKLPELK--GV 285
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+P + +V VIGGG+MG+GIATA +L V + E + G T+E ++ G + RG
Sbjct: 286 EPNPIHQVGVIGGGIMGAGIATASLLAGFDVTIIERDEAACDNGRATVEKHIAGSLKRGL 345
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
++QD+ + + L +DY+ D+V+EAV E + +K +F +L C +LA+NT
Sbjct: 346 ISQDRFDALMASLSTSIDYAALSHADLVVEAVFEDMAVKHDVFGKLSLHCKADAVLASNT 405
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + + + R+IG HFFSPAH+M LLE+VRT+ AQ + + + K+
Sbjct: 406 SYLDINEIASRCINPQRVIGLHFFSPAHIMKLLEVVRTKSADAQSLATAFEFARALGKIA 465
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V G C GF NR Y + ++ G +ID+A+ FG P+G F
Sbjct: 466 VPCGVCDGFIGNRIMSAYRKHCEYMLEDGALPDQIDAAMVEFGFPMGLF 514
>gi|427816788|ref|ZP_18983852.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica 1289]
gi|410567788|emb|CCN25360.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica 1289]
Length = 705
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 279/522 (53%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 251 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTKAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|407788567|ref|ZP_11135692.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Celeribacter
baekdonensis B30]
gi|407197167|gb|EKE67246.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Celeribacter
baekdonensis B30]
Length = 650
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 289/531 (54%), Gaps = 26/531 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRD-DVKAIVLTGNGGRFSGG 64
VT++V DG+ +T+ NPPVNAL + GL D AT RD DV+A+VLTG G F G
Sbjct: 4 VTVDV-RDGLGWVTIDNPPVNALGRAVRQGLWDAV--ATLRDADVRAVVLTGAGRAFVAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI + +PDV + I D P +AA+ GLALGGGLE+AM CHARI
Sbjct: 61 ADIRELGQTPVE---PYLPDV-----LAAIADAPVPWIAAINGLALGGGLEVAMACHARI 112
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
AAP +LGLPE+ +G+IPG GGT RLPRLV ++ AI+++ K I ++E + GL+D +
Sbjct: 113 AAPSAKLGLPEVNIGIIPGSGGTVRLPRLVSMATAIKLVTSGKPIGAQEALESGLVDRLG 172
Query: 185 TSEELLKVSRLWALDIAARRKP---WIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
+ L + + + A D+AA +P R L D + ++A ++ K +R
Sbjct: 173 EGDLLAEATAM-AKDLAASGRPEPALARDLVAGDPIDWDAQAAQLRKRSRGAVAPLEALA 231
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
A D +E + E + F L + + L HVFFA+R + +
Sbjct: 232 SLKCAARDPVEVALA--------GERERFLWLAASEEAAALRHVFFAERGAGQALKQAEA 283
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
P + +V VIGGG MG+GIATA +L YV L E + + + V R
Sbjct: 284 --VPADLSRVGVIGGGTMGAGIATALLLAGSYVCLIERDDAAAQTAKTRVADTIAASVKR 341
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G + K +AL L +Y+ +D +VIEAV E + +K+++F++L+ P ILAT
Sbjct: 342 GAIAATKGESALARLGTDTEYAALRDCPLVIEAVFEDMGVKREVFTKLDAVMPAEAILAT 401
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D+N++ E T RI+G HFFSPAHVM LLE+VR E T A+ + + K+++K
Sbjct: 402 NTSYLDVNLLAETTKDPSRILGLHFFSPAHVMKLLEVVRGEATGARALATGGALAKLLRK 461
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+PVV G C GF NR Y + ++ G +ID+A++ FG +G +
Sbjct: 462 IPVVAGVCDGFIGNRIMAAYRRDCEFMLEEGALPHQIDAAMQGFGFAMGIY 512
>gi|397470061|ref|XP_003806653.1| PREDICTED: peroxisomal bifunctional enzyme [Pan paniscus]
Length = 723
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 292/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPYMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L H FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQHAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLAIANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|254283934|ref|ZP_04958902.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
gi|219680137|gb|EED36486.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
Length = 696
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 282/530 (53%), Gaps = 27/530 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + +IT+ NPPVNA++ + +GL D + A + DD +A+++ G F G DI+ F K
Sbjct: 10 DAIGVITIDNPPVNAMSHAVRSGLVDALDTA-AEDDSQALLIICKGRTFIAGADISEFGK 68
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P S L ++++++ K VAA+ G ALGGG E A+ C+ R A +
Sbjct: 69 ----------PPKSPTLRDMLDMLDSHPKLTVAAIHGTALGGGFETALCCNYRCALDTAK 118
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+GLPE+ LG++PG GGTQR PRL G + AI ++ + +E+ GLID VV + L
Sbjct: 119 VGLPEVKLGLLPGAGGTQRTPRLAGAADAITLITQGNPMPAEQALTSGLIDQVVQGDLLA 178
Query: 191 ----KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-EAREVLKLARLQAKKTAPNMPQHQ 245
V RL A D RR D SLS E RE + AR K Q
Sbjct: 179 GAVDYVHRLIAEDAPRRRA--------RDLPFSLSDEDREAIASARKSLAKKTRGEHAPQ 230
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
LD IE SG+ +E ++F + S + H+FFA+R +K+ + D + P
Sbjct: 231 RILDCIEAAATLDFNSGLARERELFDACMTDPQSAAMRHMFFAERQAAKIQGM-DPSVAP 289
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + V +IG G MG GIA I V L ++NS+ + G+ I N V RG+ +
Sbjct: 290 RDIGSVGIIGAGTMGGGIAMCFAQAGIPVTLLDMNSDAVTAGLDRIRKNYAISVKRGRFS 349
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+++ N + ++G DY++ + D+VIEAV E++ +KQ +F L+ C ILA+NTS
Sbjct: 350 EEQVNAIMANIEGSSDYADLAETDLVIEAVFENLAVKQDVFRSLDSVCKADAILASNTSY 409
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
++ + TS ++G HFFSPA+VM LLE+VR +T ++I M VGK I KVPV+
Sbjct: 410 QSIDDIAAVTSRPQSVLGTHFFSPANVMKLLEVVRGAQTDDEIIATAMAVGKKIGKVPVL 469
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR Y + A+L + G +ID A+ +G+ +GP G
Sbjct: 470 AGMCYGFIGNRMLRSYGREAQLCLIEGATPAQIDGAMERWGMAMGPIAVG 519
>gi|86140265|ref|ZP_01058826.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
gi|85823068|gb|EAQ43282.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
Length = 697
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 297/522 (56%), Gaps = 25/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL I GL E A +D KA+++ G+G + G DI F K
Sbjct: 13 IAVLKAQNPPVNALGYDIREGLLAGIERA-EKDGAKAVLIYGDGRTYFAGADITEFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ IE +V+A+ G ALGGGLE+A+G H RIA P ++GLP
Sbjct: 72 RG---IFLPDLCTR-----IESSPLLVVSALHGTALGGGLEVALGSHYRIAVPSARVGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLKV 192
E+ +GV+PG GGTQRLPRL+G+ +++++ + + ++E +LG++D + E E+
Sbjct: 124 EVLIGVMPGAGGTQRLPRLIGVEASVDVITSGRQVGAKEALELGILDRIEEGEPREIGLA 183
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVI 251
L+ A R+P + + + + + +VLK R L A A + QAC ++
Sbjct: 184 YTQELLESGATRRP-VSEMPAPEAVDFDALYEKVLKKGRGLLAPAVA--VRGIQACCELP 240
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ +E ++F EL+ D +G++H FF++RA SK+P + G+ PR + +
Sbjct: 241 FD-------EGMKRERELFMELMNTDQRQGMIHAFFSERAVSKLPELK--GVAPRELGSI 291
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MG+GIATA +L+ + VV+ E+ I N++G + RGK+++ +
Sbjct: 292 GVIGGGTMGAGIATAALLSGLPVVMLEMTEAAAEAAKGRITGNLQGALKRGKISEAQFTQ 351
Query: 372 -ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
++L DY+ DVD+VIEAV E + +K+ +F +L++ C ILA+NTS +D+N
Sbjct: 352 LTEEILTLSTDYAALSDVDLVIEAVFEEMSVKKVVFGKLDEVCKKGAILASNTSYLDVNE 411
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS + +IG HFFSPAHVM LLEIV ++T+ V+ +G+ +KK+ V G C
Sbjct: 412 IAACTSRPEDVIGLHFFSPAHVMKLLEIVVADKTALDVVATGFALGQRLKKISVRAGVCD 471
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y ++A ++ G ++ID A+ FG +GPF
Sbjct: 472 GFIGNRILSTYRKAADHMILDGASPYQIDKALTDFGFAMGPF 513
>gi|309783449|ref|ZP_07678154.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|404397820|ref|ZP_10989607.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
gi|308917780|gb|EFP63472.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|348609994|gb|EGY59703.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
Length = 680
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 288/521 (55%), Gaps = 15/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+G+A+ITL NPPVN+L + + + +EA S V IVL G+ FS G D+ F
Sbjct: 6 NGIAVITLDNPPVNSLGHALRERIVQQLDEAQSNPAVHGIVLAGSEKAFSAGADVTEF-- 63
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + + V+ IE KP+VAA+ G+ALGGGLELA+ CH R+A ++G
Sbjct: 64 ----GTPRQLQAPILRTVLARIEASNKPVVAAITGVALGGGLELALACHGRVAQASARVG 119
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+TLG+IPG GGTQRLPRL+G++ A +M + T+ + GL DAVV S ++
Sbjct: 120 LPEITLGLIPGSGGTQRLPRLMGIAAAQALMATGQPQTASQLQDSGLFDAVV-SNDVTNA 178
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ A +A R P+ R+ DK+ L A +A +AK A Q +
Sbjct: 179 AIHHAAALATRGAPYPRA---RDKV--LEPAEVDAAIAAQRAKLNARQKLQPAYGALLDA 233
Query: 253 EGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
++ G+ +E ++F LV ++ L + F +R +K+P + PR VR V
Sbjct: 234 LAASALPFNEGLQRERELFLALVPTTAAQALRYQFKVEREATKLPAGAEN--SPRPVRTV 291
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AV+G G MG+GIA A + + V+L E ++ L +G + + +G V GKL D+A
Sbjct: 292 AVVGAGTMGTGIAIAALDAGLAVLLLEQDAAALERGRVRVMEHYQGRVAAGKLGADEAAA 351
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L G LD++ K+ D+VIEAV E + +KQ +F +++ P +LATNTS +D++ +
Sbjct: 352 NEARLVGTLDWARMKEADLVIEAVFEDLAVKQGVFQQIDTYARPGAVLATNTSYLDVDAI 411
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
TS ++G HFFSPA+VM LLE+VR +T+ VI M VG +KK PV+ GN G
Sbjct: 412 AAATSRPQDVLGLHFFSPANVMKLLEVVRGAQTAPDVIATGMAVGSALKKTPVLTGNGFG 471
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + Y + ++ G +D+A+ +FG +GPF
Sbjct: 472 FIGNRIYNAYRRQCEFMLEDGAWPEDVDNALTAFGFAMGPF 512
>gi|94984861|ref|YP_604225.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
gi|94555142|gb|ABF45056.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
Length = 695
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 280/519 (53%), Gaps = 14/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNA + + GL + A + + ++A+V+ G G F G DI F
Sbjct: 12 VLVLTINNPPVNAFSPGVPEGLHAGLDTAEADEGIRAVVIMGGGRTFIAGADIKTF---- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D+ + + ++ KP VAA+ G ALGGGLE+A+ C+ R+A +LGLP
Sbjct: 68 ---DLPREQAPDLRGFIARLDAFPKPTVAAIHGTALGGGLEVALACNYRVATRDARLGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LGV+PG GGTQRLPR+VG KA+EMML I + E LGL+DA+V + L+
Sbjct: 125 EVKLGVLPGAGGTQRLPRVVGPQKALEMMLSGNPIGATEAKALGLVDALVEGD--LREGA 182
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ + A +P R R K S E+ AR KKT +D+ E
Sbjct: 183 VAFARVHADDRPLPRISERPVKDASP----ELFAAAREGIKKTHRGQLAPSLIIDLAEMA 238
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G EA++F + SRGL H+FFA+R K+P +T + +V ++
Sbjct: 239 ATRPFAEGWDAEARLFMQAKDSPQSRGLRHIFFAEREAGKIPGLTK-DTPTTEITRVGIV 297
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA + I V + E + E L +G+ TI N +G+LT ++ L
Sbjct: 298 GAGTMGGGIAMNFLNVGIPVTIVETSQEALDRGLATIRRNYENTAHKGRLTMEQVEQRLS 357
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+L LD + D D++IEAV E + +K+ IF L+ P ILATNTST+D+N +
Sbjct: 358 LLTPTLDLTALSDADLIIEAVFEDMDVKKDIFRRLDSIAKPGAILATNTSTLDVNEIASV 417
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
TS +++IG HFFSPA+VM LLEIVR ++TS V+ + + K I KV VVVG C GF
Sbjct: 418 TSRPEQVIGLHFFSPANVMRLLEIVRADKTSDSVLATCLNLAKRIGKVGVVVGVCDGFVG 477
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y AR LV G D+A+ + GLP+GPF+
Sbjct: 478 NRMIHRYGDEARKLVEEGARPQDADAAMHALGLPMGPFE 516
>gi|90423729|ref|YP_532099.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB18]
gi|90105743|gb|ABD87780.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB18]
Length = 697
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 287/526 (54%), Gaps = 16/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + G+ + ++A + V+AIVLT G F G DI F
Sbjct: 10 HDAIAIVTVDSPPVNALSAAVRRGISETVKQAIADPAVQAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P S L V+ +E+ KPIVAA+ G ALGGGLE+A+GCH R+A
Sbjct: 70 K----------PPQSPGLGEVITELENSPKPIVAAIHGTALGGGLEVALGCHFRVAVKDA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+ LG++PG GGTQRLPR VG A++M++ I + E + GLID +V E
Sbjct: 120 RLGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALQHGLIDEIV--EAT 177
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+A + A ++ R KL + R + A K A + A D
Sbjct: 178 AAGGEAFARKVLAEQRGLRRLRDDDSKLQAAKTDRSIFTQAVASMTKKARGLEAPFAAAD 237
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ I G+ +E F +LV + S+ + FFA+R +KV +V D G KPR V
Sbjct: 238 AVGAAIDLPFDEGLKQERDGFMKLVTGEQSKAQRYAFFAEREAAKV-SVPD-GTKPRPVA 295
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+VA+IG G MG GIA + I V L E + L +G+ ++ N RG + D
Sbjct: 296 RVAIIGAGTMGGGIAMSFANAGIPVTLIETGEQQLKRGLGVMQKNYDATAARGGIPADAP 355
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ ++ GV+ KD D+VIEAV E++ +K+++F+ ++ P +LA+NTS ++++
Sbjct: 356 AKRMALINGVVGLEHVKDADLVIEAVFETMAVKKEVFTAIDAYAKPGAVLASNTSYLNID 415
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ + T + ++G HFFSPA+VM L EIVR ++T+ +L + + + I KVP VVG C
Sbjct: 416 EIAQVTKRPEDVLGMHFFSPANVMKLCEIVRADKTAPDALLTAVAIARKIAKVPAVVGVC 475
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A L+ G ++D+ + FG+P+GPF G
Sbjct: 476 DGFVGNRMLAARGKQAERLLFEGALPQQVDAVVTKFGMPMGPFAMG 521
>gi|430805524|ref|ZP_19432639.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
gi|429502228|gb|ELA00543.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
Length = 715
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/528 (36%), Positives = 269/528 (50%), Gaps = 24/528 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ L NPPVN L AGL A V +VL G G F GG DI F
Sbjct: 22 VAVLWLDNPPVNGLGDTTRAGLHAGITRALQDATVAGVVLAGAGKAFCGGADIRQF-NTP 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LIE KP+VAA+ G+ALGGGLELAMGCH R+ A LGLP
Sbjct: 81 AATARPLSRDV-----LALIESASKPVVAAIHGVALGGGLELAMGCHYRVVASDASLGLP 135
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE------ 188
E+ LG++PG GGTQRLPRLVG+ +A++M+ ++ E ++GL DAV +
Sbjct: 136 EVNLGLVPGGGGTQRLPRLVGVEQALDMIQQGVPVSGETAARIGLADAVADASPSGTRDA 195
Query: 189 ----LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
L V A P +L + + + ++A + K A N
Sbjct: 196 GPVVALAVDFCRRAAARAVAHPVASAL----AVKAGGDVDFGTRIAAINGK--ARNAIAQ 249
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
AC+ +E G+ E F+ LV + S+ L H+FFA+R K L+
Sbjct: 250 NACIRCVEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKFAEGKGQALR 309
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P + +VAVIG G MG GIA + + I V+L E L +G+ I N +GKL
Sbjct: 310 P--IERVAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGVALIRRNYEITAAKGKL 367
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + + + L + D D+V+EAV E + +KQ IF L+ C P ILATNTS
Sbjct: 368 APQQIDARMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPSAILATNTS 427
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPA+VM LLE+VR + T A VI M + + I+K+PV
Sbjct: 428 RLNIDTIAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATHADVIASCMAMAQRIRKIPV 487
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+V C GF NR PY + A L+ G ++D A+ FG+ +GP
Sbjct: 488 LVRVCEGFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPL 535
>gi|359790820|ref|ZP_09293699.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253181|gb|EHK56342.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 694
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 208/530 (39%), Positives = 286/530 (53%), Gaps = 17/530 (3%)
Query: 7 TMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+ + DG +AI+T+ NPPVNAL + L+ E T V IVL G F G
Sbjct: 4 TVTITRDGEIAIVTIDNPPVNALGFGVREPLQKALETLTGDASVAGIVLACAGRTFVAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P EL ++ +E +KP VAA+ G ALGGGLELA+GCH R
Sbjct: 64 DITEFGK----------PKQRPELRDIIETLEAIRKPTVAAIHGAALGGGLELALGCHFR 113
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IA +LGLPE+ LG++PG GGT RLPRLVG SKA++M++ + ++ L+DA+
Sbjct: 114 IADKGAKLGLPEVKLGLVPGAGGTVRLPRLVGPSKALKMIVSGAPVPADVALASALVDAI 173
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
S LL + +A D AA +R ++ + + + A +
Sbjct: 174 SESS-LLANAVAFARDKAASGVAAAPVRNRGGQI--IGADLAAFDADAAELARKARGLEA 230
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
AC + I + E ++F +LV D SR H+FFA+R +KVP V +
Sbjct: 231 PLACAQSVRNAITLPFDEALAAERELFTKLVSGDQSRAQRHLFFAEREATKVPGVGK-EV 289
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR +R+V VIG G MG GIA A + I V L E+N E L +G+ TIE N V+RG
Sbjct: 290 APREIRRVGVIGAGTMGGGIAMAFVNGGIPVTLLEMNREALDRGLATIEKNYAISVSRGS 349
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
L++D + + DY++ + D+VIEAV E + +K+++FS+L+ P ILATNT
Sbjct: 350 LSEDAKAGRMALFAPTTDYADLAECDLVIEAVFEDMAVKREVFSKLDAVAKPTAILATNT 409
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D+N + TS ++G HFFSPA+VM LLEIVR E+T+ V+ + V K I KVP
Sbjct: 410 SYLDVNEIAASTSRPQDVLGLHFFSPANVMKLLEIVRGEKTAPDVLATALGVAKRIGKVP 469
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVG C GF NR S A L+ G ID FG P+GPFQ
Sbjct: 470 VVVGVCHGFVGNRMLSARSADAENLLLEGASPDEIDKVFTGFGWPMGPFQ 519
>gi|332286481|ref|YP_004418392.1| fatty oxidation complex subunit alpha [Pusillimonas sp. T7-7]
gi|330430434|gb|AEC21768.1| fatty oxidation complex, alpha subunit [Pusillimonas sp. T7-7]
Length = 696
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 296/533 (55%), Gaps = 24/533 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ + ND +A+IT+ NPPVNAL+ + +GLK + VKA+VL G FS G
Sbjct: 5 VSFALRND-IALITIENPPVNALSQAVRSGLKAAITQGEQDSRVKAMVLICAGRSFSAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+ F K + VE V+ IE KPIVAA+ G ALGGGLE+A+GCH RIA
Sbjct: 64 DIHEFGK-------PPQEPLLVE-VIEEIEQASKPIVAAIHGTALGGGLEVALGCHFRIA 115
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ ++GLPE+ LG++PG GGTQRLPRL+G+ A+E+++ +++E +LGLID V
Sbjct: 116 SMDAKMGLPEVKLGLLPGAGGTQRLPRLIGVPAALELIVDGGMVSAERALELGLIDERVV 175
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQ 243
S +L + +A + P +R L D S S+ E + R + AP
Sbjct: 176 SGKLEAAALDFARGVIDSSMP-VRRLSTLDCSFSDSDVFEAYTESVTRKRRGYIAP---- 230
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
C+ ++ G+ +E +F EL S+ H FFA+RA ++VP+ T L
Sbjct: 231 -LRCIAAVQAAAELPFAKGMERERAMFLELAASFQSKAQRHAFFAERAAARVPDAT---L 286
Query: 304 KPR----GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
K V V V+G G MG+GIA I V+L E N++ L +G+ TI N +
Sbjct: 287 KKETEVLSVDSVGVVGAGTMGTGIAMCFANVGIPVLLLETNADNLERGVATIRKNYARTM 346
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
RG LTQ + + + +++ Y + VD+VIEAV E + +KQ +F L++ C P IL
Sbjct: 347 DRGGLTQAEMDRRIALIRPSAVYEDLAQVDLVIEAVFEELGVKQMVFRMLDQVCKPGAIL 406
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS ++++ + + T+ + ++G HFFSPA+VMPLLE VR +T QV M VGK+I
Sbjct: 407 ASNTSYLNIDAIADVTARPEYVLGMHFFSPANVMPLLENVRGAKTLPQVCAAAMKVGKVI 466
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K PV+V C GF NR ++ + ++ G +ID + FG P+GPF
Sbjct: 467 GKTPVMVRVCDGFVGNRMLAKRTRESYFMLEEGATPQQIDRVLYDFGFPMGPF 519
>gi|397733304|ref|ZP_10500023.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
gi|396930876|gb|EJI98066.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
Length = 701
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 283/530 (53%), Gaps = 16/530 (3%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
+P V EV DGVA+I L NPPVN L + AGL A + D V A+V+ G G F
Sbjct: 10 SPTVRYEV-CDGVAVIRLANPPVNGLGDTVRAGLASAVARAAADDHVGAVVVVGEGKGFC 68
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GG D+ F D +L PDV + I KP++AA+ G ALGGGLELA+ CH
Sbjct: 69 GGADLRQFGTPAATADPTL-PDV-----LTTITHSPKPVIAAIHGFALGGGLELALACHY 122
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI +LGLPE+ +G+IPG GGTQRLPRL+G + A+ M+ ++ +LG+ DA
Sbjct: 123 RITHRDAKLGLPEVNVGLIPGSGGTQRLPRLIGAAAALRMIQQGTPVSGARAAELGIADA 182
Query: 183 VVTSEELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
+ L + + P + SL D G +A AR + + N
Sbjct: 183 CFDGDPLGAALDFLRTQVDTSTSGPVVDSLPPADATGIDFDA------ARRPVRPSTRNG 236
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
+D +E +G+ E F L+ S L HVFFA++ K+ V +
Sbjct: 237 LAQLTAIDAVETATRLPTAAGLAFERAAFLGLLRGPESAALRHVFFAEKTAPKLSGVPPV 296
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+P + +VAV+G G MGSGIA A + V L E N + L +G + T+
Sbjct: 297 SARP--ISRVAVVGAGTMGSGIAMAFANGGLPVTLIEQNQDALTRGTALVRKTYESSTTK 354
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
GKLT+ +A + + +++ LD + D+V+EAV E + +K+++F +L+ C P ILA+
Sbjct: 355 GKLTETQARDRIALIEPNLDLDAAAEADLVVEAVFEDMAVKKEVFGKLDAVCKPGAILAS 414
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +DL+ + TS +IG HFFSPA++M L+E+VR E T+ V+ +T+ + I K
Sbjct: 415 NTSRLDLDEIARATSRPSDVIGLHFFSPANIMKLVEVVRGEATADDVVATGLTLAQQIGK 474
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+PV+ C GF NR PY + A L+ G +ID+A+++FG+ +GP
Sbjct: 475 IPVLSQVCEGFIGNRMLTPYRREAEFLLEEGATPQQIDAALQAFGMAMGP 524
>gi|408417043|ref|YP_006627750.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis 18323]
gi|401779213|emb|CCJ64709.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella pertussis 18323]
Length = 705
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 278/522 (53%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFTRAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 251 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRFIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|92115984|ref|YP_575713.1| 3-hydroxyacyl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
gi|91798878|gb|ABE61253.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Nitrobacter hamburgensis X14]
Length = 707
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 285/521 (54%), Gaps = 11/521 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+AI+T+ +PPVNAL + G+ + + A + VKAIVL G F G DI F
Sbjct: 10 HDGIAIVTVDSPPVNALGAAVRRGILECAQTAVADPAVKAIVLACAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E+V L E+ KP VAA+ G ALGGGLE+A+GCH R+A +L
Sbjct: 70 K-------PTQPPALAEVVAAL-ENSPKPTVAAIHGTALGGGLEVALGCHFRVAVKDARL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ + + + E K GLIDA+V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGEPVGATEALKQGLIDAIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A + A R+P R +L + R + A K A + A + +
Sbjct: 180 GGEAFACRVLAERRPLRRLRDDDSRLMAAKANRSIFTDAVAAVTKRARGLEAPFAAAEAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + +E ++F +L+ D S+ + FFA+R ++V V + G KPR V +V
Sbjct: 240 GLSLDTPFDEALKQERELFLKLMNGDQSKAQRYAFFAEREAARVAGVPE-GTKPRKVERV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + I V L E+ E L +G+ + N RG + D+
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIEMGDESLKRGLGVMRKNFEATAARGGIAADEPAR 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ KD D+VIEAV E++ +K+++F+ L+K +LA+NTS +++N +
Sbjct: 359 RMGLVTGVVGLEHVKDADLVIEAVFETMAVKKEVFATLDKFARSGAVLASNTSYLNINEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM L EIVR +T+ V++ + V + I KVPVVVG C G
Sbjct: 419 ASVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDVLVTAVAVARRIAKVPVVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR S+ A L+ G ++D+ FG+P+GPF
Sbjct: 479 FVGNRMLAARSRQADKLLFEGALPRQVDAVATRFGMPMGPF 519
>gi|432486149|ref|ZP_19728064.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|433174264|ref|ZP_20358789.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
gi|431015358|gb|ELD28913.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|431692008|gb|ELJ57453.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
Length = 714
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 288/539 (53%), Gaps = 16/539 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
P P + V ++GGGLMG+GIA + V +K++N + + +K
Sbjct: 299 PGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQ 355
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 356 LEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCA 415
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I +
Sbjct: 416 AHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVK 475
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 476 LAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|33591862|ref|NP_879506.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis Tohama I]
gi|384203165|ref|YP_005588904.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis CS]
gi|33571505|emb|CAE44995.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella pertussis Tohama I]
gi|332381279|gb|AEE66126.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis CS]
Length = 705
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 278/522 (53%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 251 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRFIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|157161829|ref|YP_001459147.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HS]
gi|432671414|ref|ZP_19906943.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
gi|166972669|sp|A8A2L0.1|FADJ_ECOHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157067509|gb|ABV06764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli HS]
gi|431210333|gb|ELF08395.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
Length = 714
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 288/539 (53%), Gaps = 16/539 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
P P + V ++GGGLMG+GIA + V +K++N + + +K
Sbjct: 299 PGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQ 355
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 356 LEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCA 415
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I +
Sbjct: 416 AHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVK 475
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 476 LAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|407976062|ref|ZP_11156964.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
gi|407428563|gb|EKF41245.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
Length = 690
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 286/525 (54%), Gaps = 19/525 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+I L NPPVNAL + L E A + D+VKAIV+ G F G DI+ F
Sbjct: 10 EDGIAVILLDNPPVNALGHNLREPLFRALEAAKANDEVKAIVIACAGRTFIAGADISEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +PD+ + L+E KP VAA+ G ALGGGLELA+GCH RIA ++
Sbjct: 70 KPPKAPS---LPDL-----IGLLESIDKPTVAAIHGTALGGGLELALGCHYRIAERSAKI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG+IPG GGT RLPRLVG A+ +++ K I +E + LG +D + + L
Sbjct: 122 GLPEVTLGLIPGAGGTVRLPRLVGPEAALGIIVSGKPIGMDEAFSLGAVDRIAEGD-LKS 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKTAPNMPQHQACLD 249
+ +A + A P R+DKL A E + ++AR TAP +
Sbjct: 181 EAISFAREKLAEEAPHHHIRERSDKLQIDDAAFETAIEQVARKARGLTAP-----VKAAE 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 308
+ + + + +E ++F E V + S H+FFA R +KV V DI +P V
Sbjct: 236 SVRNAVTMEFGAALAREREIFLERVASEESAAQRHLFFATREAAKVRGVGRDIEARP--V 293
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
++ VIG G MG GIA A + V L E+N E L +G+ I+ N G V RG +++D+
Sbjct: 294 ARIGVIGAGTMGGGIAMAFANGGLPVTLLEMNDEALARGLHQIDRNYAGSVKRGSISEDE 353
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
L ++G Y D+VIEAV E + +K+++F L+K P ILATNTS +D+
Sbjct: 354 KTARLARIQGTTSYDALAGCDLVIEAVFEKMDVKRQVFGALDKVLKPGAILATNTSYLDV 413
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + TS ++G HFFSPAH+M LLEIVR +RT+ V+ + + + I KVPVVVG
Sbjct: 414 NEIAAVTSRPQDVVGLHFFSPAHIMKLLEIVRGDRTAPDVLATALALARRIGKVPVVVGV 473
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR + L+ G ++D FG P+GPFQ
Sbjct: 474 CNGFVGNRMLAARREQNEALLLEGATPAQVDKVFTQFGWPMGPFQ 518
>gi|33598705|ref|NP_886348.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella parapertussis 12822]
gi|33574835|emb|CAE39496.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella parapertussis]
Length = 705
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 279/522 (53%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQA-CLD 249
A++ AA + R L S +++ K+A +++ A PQ A ++
Sbjct: 188 ERAIEFAASLADSSAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAPAVE 245
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFS A+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSLANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|386856885|ref|YP_006261062.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus gobiensis I-0]
gi|380000414|gb|AFD25604.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Deinococcus
gobiensis I-0]
Length = 692
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 199/520 (38%), Positives = 282/520 (54%), Gaps = 20/520 (3%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVNA + + GL + A + DV+A+V+ G G F G DI F
Sbjct: 14 VLTINNPPVNAFSPGVPEGLHAGLDAAEADGDVRAVVIIGGGRTFIAGADIKTF------ 67
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
D+ + + ++ KP VAA+ G ALGGGLE+A+ C R+A +LGLPE+
Sbjct: 68 -DLPREQAPDLRGFITRLDAFSKPTVAAIHGTALGGGLEVALACTYRVATADARLGLPEV 126
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
LGV+PG GGTQRLPR+VG KA+EMML S+ + E LGL+D VV + L+ S
Sbjct: 127 KLGVLPGAGGTQRLPRVVGAQKALEMMLSGSSVKATEARTLGLVDEVVDGD--LRAS--- 181
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
A++ A R R L R G + E+ AR KT +D+ E
Sbjct: 182 AVEFA-RAHADARPLPRISGRGVEGASPELFAAARAGLGKTHKGQYSPGLIVDLAEMAAT 240
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV---TDIGLKPRGVRKVAV 313
G EA++F + SR L HVFFA+R KV + T +G VR+V +
Sbjct: 241 KPFAEGWDAEAQLFMQAKDSPQSRALRHVFFAEREAGKVRGLGKDTPVG----DVRRVGI 296
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA + + V + E + L +G+ TI N +G+LT D+ +
Sbjct: 297 IGAGTMGGGIAMNFLNVGLPVTIVETAQDALDRGLATIRRNYENSAKKGRLTGDEVEKRM 356
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+L LD D D++IEAV E++ +K+ IF+ L+ P ILA+NTST+++N +
Sbjct: 357 GLLTPTLDMGALADADLIIEAVFENMDVKKDIFTRLDAVAKPGAILASNTSTLNVNEIAA 416
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T+ +++IG HFFSPA+VM LLEIVR ++TS V+ + V + I KV VVVG C GF
Sbjct: 417 VTARPEQVIGLHFFSPANVMKLLEIVRADKTSDTVLATSLAVARKIGKVGVVVGVCDGFV 476
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y AR LV G D +D+A+ + GLP+GPF+
Sbjct: 477 GNRMVHRYGDEARKLVEEGADPQAVDAAMHALGLPMGPFE 516
>gi|320165951|gb|EFW42850.1| peroxisomal bifunctional enzyme [Capsaspora owczarzaki ATCC 30864]
Length = 720
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 299/530 (56%), Gaps = 19/530 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++++ NPPVN L + G+ EA S V+A+VL G G F G DI F+
Sbjct: 12 IAVLSISNPPVNTLNHAVRHGIVRSVREAISDARVQALVLVGAGRSFPAGADIKEFR--- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +L V E V +++E KPIVAA+ G ALGGGLELA+GCH R+A LGLP
Sbjct: 69 --GGQALNAPVLTE-VCDVLEQSPKPIVAALHGTALGGGLELALGCHYRVALDSAHLGLP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------- 187
E+ LG++PG GGTQRLPRL+GL +A+++++ + I++ KLGLID + +
Sbjct: 126 EVHLGILPGAGGTQRLPRLIGLQRALDLIVSGQHISAAAALKLGLIDQIFQAGAPAAAEG 185
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPNMPQHQ 245
LL + +A IA+R R + S + +V LA ++A+ + P
Sbjct: 186 TLLDRAVEYAQGIASRPLDGRRVSELVPRDKSTFDQSDVWDKALATVKAQHRGYDAPIR- 244
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
++ + G+ KE ++ L+ + L H+FFA+R VP + KP
Sbjct: 245 -IVEAVRAAAQLPFKQGMAKEYELVVNLMKGPQASALQHLFFAEREVGTVPGLNPSLAKP 303
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
VR V V+G G MG+GIA + I VVL + E+L +G+ I A V +GKLT
Sbjct: 304 --VRSVGVLGAGTMGAGIAMVFLNAKIPVVLLDTKQEFLDRGLAGIRAVYASDVKKGKLT 361
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ L +L LDY+ F +VD+ IEAV E++ +K+++F++L+ C P ILA+NTST
Sbjct: 362 EEALAKRLALLTPTLDYAAFANVDLAIEAVFENMDIKKQVFAKLDAVCKPEAILASNTST 421
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
++++ + T ++ IG HFFSPA+VM LLE VR +++S I +M + K IKKV V+
Sbjct: 422 LNIDEMAAATKRPEQFIGTHFFSPANVMRLLENVRGKKSSPSTIATVMALSKTIKKVGVL 481
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VGNC GF NR Y++ A ++ G ++D + SFG+ +GPFQ G
Sbjct: 482 VGNCDGFVGNRMLEGYAREASFMLEEGALPAQVDKVLTSFGMAMGPFQMG 531
>gi|68989263|ref|NP_001957.2| peroxisomal bifunctional enzyme isoform 1 [Homo sapiens]
gi|223590229|sp|Q08426.3|ECHP_HUMAN RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|62021246|gb|AAH38948.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|62898652|dbj|BAD97180.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
variant [Homo sapiens]
gi|83405887|gb|AAI10461.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|119598635|gb|EAW78229.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|119598636|gb|EAW78230.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|159032526|emb|CAD22483.1| L-3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 292/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|126463937|ref|YP_001045050.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
gi|126105748|gb|ABN78278.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides ATCC 17029]
Length = 655
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 277/525 (52%), Gaps = 25/525 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F +
Sbjct: 12 DGIALLTLANPPVNALGLAVRQRLTALTAELEADESVRAVVLTAEGRVFVGGADIAEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +LG
Sbjct: 72 PP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARLG 123
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---EL 189
LPE +LG+IPG GGTQRLPR +GL+ AIE++ +++++ E + GL D + E E
Sbjct: 124 LPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELIPEA 183
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKKTAPNMPQHQACL 248
L +R LD A L R L++ AR + + A P A L
Sbjct: 184 LAFAR--TLDGA---------LPRPASAAPLADPGHAFWDEARARIARAARGNPAPTAAL 232
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
+ I G+ G +G+ E + F L D + L H+FFA+RA + + G++P +
Sbjct: 233 EAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR--GIEPVPL 290
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ VIGGG MGSGIA A + V L E E L G++ +EA V RG +
Sbjct: 291 TRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPEALAAGLERVEAIFEAQVKRGLTDRAG 350
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A + + G + D D+VIEAV E + +K+++F EL + C P ILATNTS +D
Sbjct: 351 ATERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTSYLDP 410
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ E R I HFFSPA VM LLEIV T+ +++ + + + K+PV GN
Sbjct: 411 ERIVEGLPHPHRFIALHFFSPAQVMKLLEIVPLAATAPRILATGVALAARLGKIPVQAGN 470
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y A L+ G ID A+R+FGL +GPF+
Sbjct: 471 GEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFE 515
>gi|27382932|ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhizobium japonicum
USDA 110]
gi|27356105|dbj|BAC53086.1| bll7821 [Bradyrhizobium japonicum USDA 110]
Length = 698
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 284/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPPKA--------PALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDFPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALITGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQFAKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|427411688|ref|ZP_18901890.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
gi|425709978|gb|EKU73001.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
Length = 691
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 281/521 (53%), Gaps = 13/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPR+VG+ KA+++M ++++ ++GLID + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVEKALDLMTAGSPVSAKAAKEMGLIDELAIEGQLRADA 185
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
+ G+ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 SLDLPFDEGMTFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L G + + D D++IEAV E + +K+++F +L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFGKLDRIAKPGAILATNTSYLDIDDIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS D ++G HFFSPA+VM LLE+VRT+ T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPDSVVGLHFFSPANVMKLLEVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + A L+ G + +D + FG +G FQ
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQ 524
>gi|348027575|ref|YP_004870261.1| fatty oxidation complex subunit alpha [Glaciecola nitratireducens
FR1064]
gi|347944918|gb|AEP28268.1| fatty oxidation complex, alpha subunit [Glaciecola nitratireducens
FR1064]
Length = 702
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 300/530 (56%), Gaps = 16/530 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ E+ D + +I L NPPVNAL+ + G++D +A D A+VL G F G
Sbjct: 4 VSYELVGD-IGVIRLNNPPVNALSHALRIGVQDAVSKAQD-DSSLALVLICEGRTFIAGA 61
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+ F G +MP + EL+++ IE KKPI+AA+ G ALGGGLE A+ CH R A
Sbjct: 62 DISEF------GKAPMMPSLP-ELLID-IESSKKPIIAAIHGTALGGGLETALACHYRCA 113
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P Q+GLPE+ LG++PG GGTQR+PRLVG+ A++++ I + + +GLID VV
Sbjct: 114 LPSAQVGLPEVKLGLLPGAGGTQRVPRLVGVKAALDLITSGTPIAASKALSIGLIDKVVD 173
Query: 186 SEELLKVSRLWALDIAARRKPWIR-SLHRTDKLGSLSEA-REVLKLARLQAKKTAPNMPQ 243
+ LL + +A ++ + + S +K G E E+ R+ K
Sbjct: 174 GD-LLSGALEFAKEVIEQGATLKKISDLEVEKQGDSPEFFSELFAEWRITLSKRYRGQEA 232
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIG 302
Q +D IE + G+ E ++F E + S L H+FFA+R +SKV + D
Sbjct: 233 PQRIVDCIEAAVNKPFNEGLKIERELFMECMQSSQSAALRHLFFAERMSSKVNGLPKDTQ 292
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LK +++V +IGGG MG GIA + I V L E+N E L +G I N V++G
Sbjct: 293 LK--DIKRVGIIGGGTMGGGIAMNFVNVGIPVTLLEINDEALQRGKDIIAKNYAITVSKG 350
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
KL+ + A+ M+ G DY+E ++D+VIEAV E++ +K+++F +L+ C ILATN
Sbjct: 351 KLSAELADERQGMITGTTDYNELANMDLVIEAVFENLDIKKQVFKKLDAVCKQGAILATN 410
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS D++++ + TS +IG HFFSPA+VM LLEIVR E TS QV+ M V K IKKV
Sbjct: 411 TSYQDVDLIAQATSRPQDVIGLHFFSPANVMKLLEIVRGEHTSDQVLATSMAVAKSIKKV 470
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
P + C GF NR PY + ++L + G IDS ++ FG+ +GP
Sbjct: 471 PALSRVCYGFIGNRMLRPYVRESQLCLLEGSTPQAIDSVMQRFGMAMGPL 520
>gi|386400122|ref|ZP_10084900.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385740748|gb|EIG60944.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 698
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 284/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVDSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPPKP--------PALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAA 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKIAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R SK+ V + G KPR V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKPRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|114590836|ref|XP_517004.2| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Pan
troglodytes]
gi|410226936|gb|JAA10687.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410247014|gb|JAA11474.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410289468|gb|JAA23334.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332285|gb|JAA35089.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332287|gb|JAA35090.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332289|gb|JAA35091.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
Length = 723
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 292/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ +++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPASLDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|119713641|gb|ABL97692.1| fatty oxidation complex alpha subunit [uncultured marine bacterium
EB0_39H12]
Length = 690
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 276/521 (52%), Gaps = 11/521 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA+I L +PPVNAL+ + GL + A VK+IV+ G F G DI F
Sbjct: 14 DEVAVIMLNSPPVNALSANVREGLNNGVSAAIEDSSVKSIVIICEGRTFIAGADITEF-- 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G P S+ V ++IE+ KP+VAA+ G ALGGGLE+A+ CH RIA P + G
Sbjct: 72 ----GQAPKGP--SLYEVQDMIENSPKPVVAAIHGTALGGGLEVALTCHYRIAVPSAKCG 125
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR+VG SKA+ MM + + + + +GL+D + L
Sbjct: 126 LPEVNLGLLPGAGGTQRLPRIVGASKALVMMTSGEHVPANQCHDMGLVDEMADEANLEGD 185
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A I + KP ++ +K+ S + R + + + IE
Sbjct: 186 AIQFANRIVSEGKPLVKVRDADEKIKSDKGNDALFADFRKSILRKTRGFLAPEYNIQCIE 245
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKV 311
+ G+ E +F +L+ S ++FFAQR +K+P++ + LK G V
Sbjct: 246 AAVNLPFEEGMKVEQDLFMKLMTGSQSAAQRYMFFAQRQVTKIPDIEKETPLKEIG--SV 303
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
+IG G MG GI+ I V + E + E L KGI I N +G++T ++
Sbjct: 304 GIIGAGTMGGGISMNFANVGIPVTIIEQSQERLDKGISIIRKNYENTAAKGRITSEQVEE 363
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ G D++IEAV E++ LK+ IF +L+ C ILA+NTS +D+N +
Sbjct: 364 RMSLINGQTSIEALNTQDLIIEAVFENMDLKKDIFKQLDNICKEGAILASNTSALDVNEI 423
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T+ + +IG HFFSPA+VM LLEIVR ++TS V+ + V K I+K+ VVG C G
Sbjct: 424 ADVTNRPEDVIGLHFFSPANVMKLLEIVRGDKTSKSVVASSLAVAKRIQKIAAVVGVCPG 483
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + A L+ G + ID A+ FG P+GPF
Sbjct: 484 FVGNRILAQRQREANKLILEGALPWDIDDALFDFGFPMGPF 524
>gi|56695674|ref|YP_166025.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
gi|56677411|gb|AAV94077.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Ruegeria pomeroyi DSS-3]
Length = 698
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/523 (35%), Positives = 280/523 (53%), Gaps = 26/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ I+ NPPVNAL + GL + A + + + +++ G G F G DI F K
Sbjct: 13 IVILAADNPPVNALGHAVRQGLAVGLDRAEA-EGARGVLIYGTGRTFFAGADIREFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P L + N IE +V+A+ G ALGGGLE+A+ H RIA P+ ++G
Sbjct: 70 --------PPKEPHLPELCNRIEASPLLVVSALHGTALGGGLEVALATHYRIAVPQAKVG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLK 191
LPE+ LG++PG GGTQRLPR+ G+ A++M+ + + ++E +LG+ID V E +
Sbjct: 122 LPEVHLGILPGAGGTQRLPRVAGVEAALDMITTGRHVRADEALRLGVIDRVAEGEPREIG 181
Query: 192 VSRLWA-LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+S L LD A R+P + + + + VL+ R Q AC
Sbjct: 182 LSYLRELLDEGAPRRP-VGEMPAPAPVDFDAIYAAVLRKGRGQLSPATAVRAVQAACE-- 238
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+G+ +E ++F EL+ D GL+H FFA RA K+P + G+ PR +
Sbjct: 239 -----AESFAAGLKRERELFMELMNSDQREGLIHAFFADRAVGKLPELE--GVAPRPLAA 291
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ VIGGG MG+GIATA +L+ + V + E+ E IE N+ G + RGKLT + +
Sbjct: 292 IGVIGGGTMGAGIATAALLSGLSVTMLEMTPEAAEAAKGRIEGNLSGALKRGKLTAQQFD 351
Query: 371 N-ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
N K L +DY D D+VIEAV E + +K+++F++L+ C P +LA+NTS +D+N
Sbjct: 352 NLTTKALTLAIDYDALADADLVIEAVFEDMEVKKQVFTKLDAVCKPGAVLASNTSYLDIN 411
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ TS ++G HFFSPAHVM LLE+V ++T+ V +GK + KV V G C
Sbjct: 412 QIAAVTSRPQDVLGLHFFSPAHVMKLLEVVIADQTAPDVAATGFALGKRLGKVSVRAGVC 471
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y A ++ G ++ID A+ FG +GPF
Sbjct: 472 DGFIGNRILSVYRTCADHMILDGASPYQIDEALEEFGFAMGPF 514
>gi|197099993|ref|NP_001127606.1| peroxisomal bifunctional enzyme [Pongo abelii]
gi|75054763|sp|Q5R5M8.1|ECHP_PONAB RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|55732475|emb|CAH92938.1| hypothetical protein [Pongo abelii]
Length = 723
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 291/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHSEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + GV KE ++F L +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAICKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|381202863|ref|ZP_09909972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Sphingobium yanoikuyae
XLDN2-5]
Length = 691
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 281/521 (53%), Gaps = 13/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPR+VG+ KA+++M ++++ +GL+D + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVEKALDLMTAGSPVSAKAAKGMGLVDELAVEGQLRADA 185
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
+ G+ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 SLDLPFDEGMTFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L G + + D D++IEAV E + +K+++F++L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFAKLDRIAKPGAILATNTSYLDIDDIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS D ++G HFFSPA+VM LLE+VRT+ T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPDSVVGLHFFSPANVMKLLEVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + A L+ G + +D + FG +G FQ
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQ 524
>gi|326925661|ref|XP_003209029.1| PREDICTED: peroxisomal bifunctional enzyme-like [Meleagris
gallopavo]
Length = 726
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 291/522 (55%), Gaps = 32/522 (6%)
Query: 24 PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83
PV LA+ + L+D + A + VKA+ + G G+FS G DI F + G + L P
Sbjct: 22 PVVCLAV--LQALEDGLKRADADPSVKAVTICGENGKFSAGADIRGFSSPNKQG-LGLGP 78
Query: 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG 143
+V+LIE +KP+VAA+EG+ALGGGLE+ +GCH RIA + ++GLPE+T+G++PG
Sbjct: 79 ------IVSLIERSEKPVVAAIEGIALGGGLEVTLGCHYRIAHVQARMGLPEVTIGLLPG 132
Query: 144 FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLKVS-RLWALD 199
GTQRLPRL+G+ A++++ + I++ E KLGL+D VV T E ++++ RL
Sbjct: 133 AEGTQRLPRLIGVPAALDIITTGRHISASEALKLGLVDEVVEENTVEAAIRLANRLIGQP 192
Query: 200 IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG 259
+ RR SL KL ++ L A ++ KK A + C I+
Sbjct: 193 LGHRR----LSLKPVPKLPNMEA---FLTEALVKVKKRAQGCLAPELCFQAIKAATEQPF 245
Query: 260 YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGG 316
GV KE ++F L+ ++ L + FFA+RA K + K P+ +RK AVIG
Sbjct: 246 ADGVRKERELFNILLTSGQAKALQYAFFAERAVEKWTTPSGASWKTASPQPIRKAAVIGL 305
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM- 375
G MG GI T+ + I VV E + EYL G K + L+ R + ++ L
Sbjct: 306 GTMGRGIVTSLVKAKIPVVALEQDLEYLNTGRKAVML----LLEREAMKMEQGGQTLDFN 361
Query: 376 ----LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ +D+ +DVD+VIEAV E++ LK++IF++L + C P L TNTS ++++ +
Sbjct: 362 NPARLQFAVDFDVLRDVDLVIEAVFENMALKKEIFNKLSRICKPEAFLCTNTSALNIDEI 421
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
TS ++IG HFFSPAHVM LLEI+ TS I M + K++KKV VVVGNC G
Sbjct: 422 ASVTSRPQQVIGTHFFSPAHVMRLLEIIYGRHTSPTTIATAMQLAKVMKKVGVVVGNCFG 481
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR FPY Q A L+ G +D + FG IGPF+
Sbjct: 482 FVGNRMMFPYVQQAVFLLEEGSRPEDVDQVLEDFGFKIGPFR 523
>gi|374572763|ref|ZP_09645859.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374421084|gb|EHR00617.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 698
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 283/524 (54%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVDSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP--------KPPALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAA 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKIAAARADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R SK+ V + G KPR V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKPRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ + + + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVNIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|297623637|ref|YP_003705071.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
gi|297164817|gb|ADI14528.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
Length = 693
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 289/522 (55%), Gaps = 15/522 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV ++T+ NPPVN L+ + L EA + V+A+VL G G F G D F
Sbjct: 13 GVRVLTVHNPPVNVLSPGVPEALIAGLREANADPSVRAVVLAGGGRTFIAGADARTFDL- 71
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+PDV ++ +E KP+VAA+ G ALGGGLE+A+ H R+AAP LGL
Sbjct: 72 ----PAEKIPDVPA--IMAALEASHKPVVAALHGTALGGGLEVALASHYRVAAPDALLGL 125
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRL R VG+ +A+E+ML + I + E LGL+D ++ + LL +
Sbjct: 126 PEVKLGLLPGAGGTQRLTRAVGVKRALELMLSGEPIGAREAAALGLVDELIEGD-LLAGA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A +A RR P R R + E + AR + + A + ++++E
Sbjct: 185 VAFAERVADRR-PLPRLSAR-----RAAPDPEAVAAARAELDRRAQGLLSPHFIVELVEA 238
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
G E + F + SR L H+FFA+RA +KV V R VR+V V
Sbjct: 239 ATERPFEEGTRLERERFLQARSSPQSRALRHLFFAERAAAKVAGVGK-ETPTREVRRVGV 297
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+G G MG GIA + + + V L E ++ L +G+ T+ AN +G+L+ ++ L
Sbjct: 298 VGAGTMGGGIAMSFLNAGVPVTLLEADAGALERGLATVRANYEASARKGRLSGEEVAARL 357
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
L L+ S + D++IEAV E + +K+++F L+ P ILATNTST+D+N +
Sbjct: 358 GRLTPTLEPSALAEADLIIEAVFEDMEVKKEVFGRLDALAKPGAILATNTSTLDVNEIAA 417
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
TS + ++G HFFSPA+VM L+EIVR ERTSA+V+ + + K + KV VVVG C GF
Sbjct: 418 ATSRPEDVLGLHFFSPANVMKLVEIVRGERTSAEVLATALKLTKRLGKVGVVVGVCDGFV 477
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y + A+ LV G +D A+ +FGLP+GPF+ G
Sbjct: 478 GNRMIHAYVREAQRLVEEGAAPHEVDGAMHAFGLPMGPFEMG 519
>gi|158257028|dbj|BAF84487.1| unnamed protein product [Homo sapiens]
Length = 723
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 291/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FF +R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFTERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|398383587|ref|ZP_10541655.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
gi|397724603|gb|EJK85068.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
Length = 691
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 280/521 (53%), Gaps = 13/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPR+VG++KA+++M +++ ++GLID + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVAKALDLMTAGGPVSARAAKEMGLIDELAAEGQLRADA 185
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
+ G++ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 ALELPFDDGMIFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ +L G + + D D++IEAV E + +K+++F+ L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFTRLDRIAKPGAILATNTSYLDIDDIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
TS + + G HFFSPA+VM LLE+VRT T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPNSVAGLHFFSPANVMKLLEVVRTRDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + A L+ G + +D + FG +G FQ
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQ 524
>gi|115525778|ref|YP_782689.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
gi|115519725|gb|ABJ07709.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisA53]
Length = 694
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 287/524 (54%), Gaps = 16/524 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVAI+T+ +PPVNAL+ + G+ + A + V AIVLT G F G DI F K
Sbjct: 12 GVAIVTIDSPPVNALSAAVRRGIHQQVSAAVADPAVHAIVLTCGGRTFIAGADITEFGK- 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
P S+ V++ +E+ KP++AA+ G ALGGGLE+A+GCH R+A + +LGL
Sbjct: 71 ------PPQPP-SLHEVISTLENSPKPVIAAIHGTALGGGLEVALGCHFRVAVKEAKLGL 123
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPR VG A++M++ + I + E + GLI+ +V E
Sbjct: 124 PEVKLGLLPGAGGTQRLPRAVGPELAVKMIVSGEPIGASEALQHGLIEEIV--EGPAAGG 181
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + A ++P + KL + R + A K A + AC D I
Sbjct: 182 EAFARKVLAEKRPLRKLRDDDAKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIAA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTDIGLKPRGVRKV 311
I G+ KE + F +LV+ D S+ + FFA+R +KV P T +PR V KV
Sbjct: 242 AIDLPFDEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVEVPEAT----RPRPVNKV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 AIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNYEATAARGGIPADAPAK 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 358 RMGLITGVVGLEHVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNIDEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA+VM L EIVR +T+ +L +++ + I KVP VVG C G
Sbjct: 418 AATTKRPQDVLGMHFFSPANVMKLCEIVRAAKTAPDALLTAVSIARKIAKVPAVVGVCDG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR ++ A L+ G ++D+ + FG+P+GPF G
Sbjct: 478 FVGNRMLAQRAKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 521
>gi|89901371|ref|YP_523842.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89346108|gb|ABD70311.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 706
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 284/521 (54%), Gaps = 15/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++ + NPPVNAL + + G+ + A + V+A+++ G G F G DI F
Sbjct: 18 ILLVMINNPPVNALGVAVRCGIVAAIDAADADPAVQAVLIIGTGRNFIAGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ V N IE C KP+VAA+ G ALGGGLE+A+ H R+AA +LGLP
Sbjct: 74 --GKPPLPP--SLPDVCNRIEACSKPVVAAIHGAALGGGLEIALAAHYRLAATDVKLGLP 129
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQR PRL+G A+++ML + + +EE LGL+D + S ++L
Sbjct: 130 EVQLGLMPGAGGTQRTPRLIGAKAALDLMLSGRHMGAEEAHALGLVDRLGHSNDILADGL 189
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ ++ A P +R L R ++ R + K + + ++ +E
Sbjct: 190 AYTQELLATHAP-VRRTRDAQALSDRQANRASIEAVRAETGKKSRGLFSPLKIVEAVEAA 248
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
+ G+ E ++F L LD+++ GL+H FFA+R K P + KPR + V
Sbjct: 249 LDKSFDEGLRIERELF--LQCLDSAQRAGLIHAFFAEREVLKAPETRNT--KPRAIAHVG 304
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+GGG MG+GIA A + + V + E + L +G IE GL+ +G++T D
Sbjct: 305 VVGGGTMGAGIAVAVLDAGLSVTMIERDEAALARGHAHIEKVYNGLIAKGRMTTDAKAAN 364
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L G Y D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D++++
Sbjct: 365 LARFVGSTSYDALAPADIVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDIDVIA 424
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
S ++G HFFSPA++M LLEIV + SA V+ + K + KVPV G C GF
Sbjct: 425 ASISRPADVVGLHFFSPANIMKLLEIVVPAKVSADVVATAFELAKKLHKVPVRAGVCDGF 484
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y +A ++ G ++ID A+R FG P+GPFQ
Sbjct: 485 IGNRILAAYRMAADYMMEDGASPYQIDQAVRDFGYPMGPFQ 525
>gi|452045|gb|AAA53289.1| enyol-CoA: hydratase/3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 290/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAGRDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA Q+
Sbjct: 68 APRTFGLI-------LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHADAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIGVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|85372891|ref|YP_456953.1| fatty oxidation complex subunit alpha [Erythrobacter litoralis
HTCC2594]
gi|84785974|gb|ABC62156.1| fatty oxidation complex, alpha subunit [Erythrobacter litoralis
HTCC2594]
Length = 678
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 280/527 (53%), Gaps = 22/527 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GLKD EEA D +KA+V+ +G F G DI F
Sbjct: 10 HDDVLVIISDNPPVNALGQAVRQGLKDGVEEAMGDDAIKAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + +P+ ++ +E KP+VAA+ G ALGGG E+A+ CH R+A P +L
Sbjct: 70 KPPQGPN---LPET-----LDAMEAGDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GTQRLPR+VG+ A+ M++ I + + +GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRVVGVEAALPMVVNGNPIPAAKAEAIGLVDKIVGEDSLEA 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 247
+ +A + KP RS T + + A+K AP+
Sbjct: 182 DAIAFAREQIG--KPVPRSSEGTAHEDGVKNPDLFDEFRARNARKIRGFDAPDAAVKAVK 239
Query: 248 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
Y+ GV KE ++F L+ S + H FFA+RA +K+ NV D
Sbjct: 240 A------ATERPYAEGVKKERELFTGLMSGTQSAAMRHYFFAERAANKIDNV-DPKTPLI 292
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
++KV VIG G MG GIA + I V + E+ + L +G I N +G++
Sbjct: 293 DIQKVGVIGAGTMGGGIAMNFLSAGIPVTILEMKQDALDRGTGVIAKNYERTAKKGRMKP 352
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
++ A+ +L LDY++ D D+VIEAV E++ +K+++F++L++ ILA+NTS +
Sbjct: 353 EQVEQAMGLLNPTLDYADLADCDLVIEAVYENMDVKKEVFAKLDETVKQGAILASNTSYL 412
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
+++ + + T ++G HFFSPA+VM LLEIVR T V+L M + K I KV VV
Sbjct: 413 NIDEIAQATKRPGYVLGLHFFSPANVMKLLEIVRGAETRDDVLLTSMKLAKKIGKVAVVA 472
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR P + A L+ G + +D + FG P+GPFQ
Sbjct: 473 GVCDGFIGNRMLSPRQKQANELIMEGAKYWEVDDVLLEFGFPMGPFQ 519
>gi|226193718|ref|ZP_03789321.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
gi|225934296|gb|EEH30280.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
Length = 708
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 279/522 (53%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDSGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|393725326|ref|ZP_10345253.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26605]
Length = 677
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 289/537 (53%), Gaps = 24/537 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M +P +T E+ +D + II+ NPPVNAL + GL+ ++ + VKA+V+ +G
Sbjct: 1 MTSP-ITTELHDDILVIISN-NPPVNALGAAVRQGLEAGIKQGLADPQVKAMVIRCDGRT 58
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F K M + + VV++IE KP+VAA+ G ALGGG E+ +GC
Sbjct: 59 FFAGADITEFGKP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGC 110
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H RIA P ++G PE+ LG++PG GGTQR+PR+ G+ A+EM I ++ GLI
Sbjct: 111 HYRIAVPSAKIGTPEVKLGLLPGAGGTQRIPRIAGVKLALEMTAKGDPIPAKLALSAGLI 170
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK---- 236
D + + L + +A +IA R L R + + ++ V + AK+
Sbjct: 171 DRLAGEDSLEADAIAFAREIAD-----ARPLPRAREKVAQADPEAVAAFKKDNAKRFRGF 225
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
AP + AC++ +G G+ E + F +L+M S H+FFA+R +K+
Sbjct: 226 DAP--AANIACVEKAADGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKID 281
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ D ++ R +++V VIG G MG GI+ + I V + E+ E L +G TI N
Sbjct: 282 GI-DANIQLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAGTIRKNYE 340
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
+G+L ++ A+ L LD+ + D++IEAV E++ +K+ IF+ L+ P
Sbjct: 341 ASAAKGRLKSEQVEAAMGALNPTLDFEALAECDLIIEAVYENMEVKKDIFTRLDAIAKPG 400
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
ILA+NTS +D++ + T ++G HFFSPA+VM LLE+VR +T V+ +M +
Sbjct: 401 AILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTDDDVLATVMALS 460
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K IKKV VV G C GF NR P A L+ G +ID +FG+P+GPFQ
Sbjct: 461 KTIKKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDRVHVAFGMPMGPFQ 517
>gi|384222108|ref|YP_005613274.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
gi|354961007|dbj|BAL13686.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
Length = 698
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 282/524 (53%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K +VLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAIADPAIKGVVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + DV E IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP---KPPALNDVLAE-----IENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R SK+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKSRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|390349676|ref|XP_792992.3| PREDICTED: peroxisomal bifunctional enzyme-like [Strongylocentrotus
purpuratus]
Length = 594
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 289/521 (55%), Gaps = 13/521 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPP+N L+ P A + +EA VK+IVL G+G F G DI F
Sbjct: 36 VAVVTLTNPPLNVLSYPTRASIVQSIKEAEQDASVKSIVLCGSGRAFCAGADITEFTNPE 95
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ DV+ +E C KP+VA + G +LGGG+ELA+GCH R+ ++GLP
Sbjct: 96 LVFKEPHLIDVT-----KAVEACSKPVVAVMHGTSLGGGVELALGCHYRLIHKAGKIGLP 150
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GTQ++PR++ + AI+M+ + I+++E K+G+ID V+ ++ ++
Sbjct: 151 EVHIGLVPGATGTQKVPRVMSIPNAIDMITSGRHISAKEAHKMGIIDKVL-EDDYMEQGV 209
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A IA R K+ + V K+A + A M C+ IE
Sbjct: 210 AFAESIAGDPVGPRRVSQMPVKVDETTPM--VFKMAYEKVAAKARGMYSPLFCVKAIEAA 267
Query: 255 IVHGGYSGVLKEAKVFKELVML-DTSRGLVHVFFAQRATSK--VPNVTDIGLKPRG--VR 309
+ LK + E + L + S L + FF++RA SK VP+ + +G V+
Sbjct: 268 TKASSFEEGLKMERHISEFLGLGEQSGALQYAFFSERAVSKWRVPDGSASYKTAKGQEVK 327
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AVIG G MG GI + ++ I L E N +YL KG+K ++ + V +G++++ KA
Sbjct: 328 SAAVIGAGTMGVGITMSMVMAGIPTYLTEQNQQYLDKGLKMVQGILAHWVKQGRMSEAKA 387
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+++ L Y + KDVD+V+EAV E++ LK++I L+ C P ILA+NTST+D++
Sbjct: 388 QQIFSLVRPTLTYDDLKDVDVVVEAVFENMALKKEILKTLDGVCKPSAILASNTSTLDID 447
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T+ D+++G HFFSPAH+M LLE VR + TS + + M +GK +KK+ V+VGNC
Sbjct: 448 EMASATTRPDKVMGMHFFSPAHIMKLLENVRGKDTSPETMATAMDLGKRMKKISVLVGNC 507
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
F NR PYS+ A L+ G +D + FGL +G
Sbjct: 508 PAFVGNRMLAPYSREAIFLLEEGALPNEVDQVLEDFGLAMG 548
>gi|53724340|ref|YP_104708.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|67640367|ref|ZP_00439176.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|121601249|ref|YP_991561.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124386354|ref|YP_001027365.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126450585|ref|YP_001082330.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|167003208|ref|ZP_02268998.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
gi|254175157|ref|ZP_04881818.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|254201805|ref|ZP_04908169.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|254207134|ref|ZP_04913485.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|52427763|gb|AAU48356.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|121230059|gb|ABM52577.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124294374|gb|ABN03643.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126243455|gb|ABO06548.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei NCTC 10247]
gi|147747699|gb|EDK54775.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|147752676|gb|EDK59742.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|160696202|gb|EDP86172.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|238521067|gb|EEP84521.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|243061205|gb|EES43391.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
Length = 708
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 278/522 (53%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|402700675|ref|ZP_10848654.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fragi A22]
Length = 703
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 282/517 (54%), Gaps = 10/517 (1%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L + PVNAL + + L E A + +V+AI++ G+G F G DIN
Sbjct: 13 LALIGLAHAPVNALGQRLRSELLQAIERAVADGEVRAIIVYGHGVPFGAGADINE----- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+G ++ S+ V+ + KP++AA+ G+ALGG LELA+ C RI+ P + LP
Sbjct: 68 -SGTLAPFASPSLGDVLLRMTQLNKPLIAAISGMALGGSLELALACGYRISEPGARFALP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 193
++ LG+IPG GGTQRLPRLVG ++A+EM+L + + + + GL+D + S E LL +
Sbjct: 127 QINLGLIPGAGGTQRLPRLVGAAQALEMILYGRPVNARHALQAGLLDRLAQSPETLLAEA 186
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
WA ++ A + P S D L + R K P Q L +E
Sbjct: 187 SEWAHELLAAQAPAQPSPPWPDPASELPA--HYFQQYRSANKHRWQGQPAPQQALAALEA 244
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
G+ EA +F++L S L HV A+ P V ++ R V +VA+
Sbjct: 245 ACNLPLAEGLAFEAGLFQQLEGSSQSEALRHVHAAEGDLGTQPGV-NLQTPIRPVHRVAI 303
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GIA I V L E+ +E L G++ I N + V RGKLT+ + +
Sbjct: 304 IGAGTMGGGIAMCFANAGIPVALLELKAEALDHGLRQIRTNYQTGVKRGKLTEAQLEQRM 363
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++L G LDY+E D D+VIEAV ES+ +KQ++F L++ C P ILA+NTST+D++ +
Sbjct: 364 ELLHGTLDYAEISDADLVIEAVFESLAIKQQVFRTLDEVCKPGAILASNTSTLDVDAIAA 423
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T +IG HFFSPA+VM LLE+VR + T+A + +++ I K+PVV G C GF
Sbjct: 424 VTRRPQDVIGLHFFSPANVMRLLEVVRGQATAADTLATTLSIAARIGKIPVVSGVCFGFI 483
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
NR PYS+ A L+ G V +ID + GL +G
Sbjct: 484 GNRMLEPYSREAHRLLLEGATVAQIDKVLTDLGLAMG 520
>gi|121611857|ref|YP_999664.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121556497|gb|ABM60646.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Verminephrobacter eiseniae EF01-2]
Length = 703
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/523 (35%), Positives = 274/523 (52%), Gaps = 15/523 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGV +I L +PPVNAL+ + G+ +A + AIVL +G F G DI F K
Sbjct: 14 DGVGVIVLNSPPVNALSAAVRDGIHAGVRQAIADAHASAIVLRCDGNTFIAGADIREFGK 73
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P V L V +E+ KP+VAA+ G ALGGGLE+A+ CH RIA P +
Sbjct: 74 ----------PPAGVGLGEVQRALEESPKPVVAAMHGTALGGGLEVALVCHWRIAVPSAK 123
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
LGLPE+ +G++PG GGTQRLPR+VG A+E+M + + + +GLID + ++L
Sbjct: 124 LGLPEVGIGLLPGAGGTQRLPRIVGPEVALELMTSGAQVEAADALGIGLIDELAPEDDLQ 183
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ A + A ++P + + DK+ + E++ R K + +
Sbjct: 184 GAAVALAKRVVAEKRPLRKLRDQNDKVEAARGNPELVAAFRKANAKKFRGFAAPEKIVQC 243
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVR 309
+E + G+ E K+F EL+ + S H FFA R KVP + D + P V+
Sbjct: 244 VEAAVNLPFDEGLKLERKLFVELMQGEQSAAQRHYFFASRQAWKVPGLKKDAAIVP--VQ 301
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
V VIG G MG+GIA + I V + E E L +G+ TI N +G+L
Sbjct: 302 TVGVIGAGTMGAGIAMNFLNVGIPVHIVETRQEALDRGLATIRTNYGNTAKKGRLEVGAI 361
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ ++ G L+ + ++VIEAV E + +K+ +F L++ ILA+NTS +DLN
Sbjct: 362 EERMALVTGSLELQDLSGCELVIEAVFEDMEVKKHLFGRLDRVAKAGAILASNTSALDLN 421
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T+ + +IG HFFSPA+VM LLEIVR ++TS VI M + + I KV V+VG C
Sbjct: 422 QIASATARPESVIGLHFFSPANVMKLLEIVRGDQTSDSVIATSMQLARKIGKVAVLVGVC 481
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR + A L+ G + +D + FG P+GPF
Sbjct: 482 PGFVGNRILGQRQREANQLIFEGATPWAVDRVLYDFGFPMGPF 524
>gi|398822432|ref|ZP_10580812.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
gi|398226887|gb|EJN13129.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
Length = 698
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 282/524 (53%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILDCIKAAIADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E++ + E+ KPIVAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 K-------PPKPPGLNEVLAEM-ENSPKPIVAAIHGTALGGGLEVALACHYRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLIAEKRPLRRLRDDDSKIAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|410612697|ref|ZP_11323773.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410167810|dbj|GAC37662.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 698
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 203/528 (38%), Positives = 305/528 (57%), Gaps = 27/528 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINVFQKV 73
+ +I L NPPVNAL+ + +G++D +A +DD A+VL G F G DI+ F
Sbjct: 12 IGVIRLNNPPVNALSHALRSGIQDAVTQA--QDDASLALVLMCEGRTFIAGADISEF--- 66
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G ++P + L+V +E KKPI+AA+ G ALGGGLE A+ CH R A P Q+GL
Sbjct: 67 ---GKPPMLPSLPELLIV--LEASKKPIIAAIHGTALGGGLETALACHYRCALPSAQVGL 121
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQR+PRL G+ A+++M I + + +GLID VV +LL +
Sbjct: 122 PEVKLGLLPGAGGTQRVPRLTGVKAALDLMTTGAPIAAAQALNIGLIDKVVEG-DLLSAA 180
Query: 194 RLWALDIAARRKPWIR-SLHRTDKLGS----LSEAREVLKLARLQAKKTAPNMPQHQACL 248
+A ++ A+ R S DK + +E R+ L RL+ ++ AP+ +
Sbjct: 181 LDFANEVIAQGAELKRVSDLEVDKTTASAEFFAEYRKTLS-KRLRGQE-APHR-----IV 233
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 307
+ IE + G+ E ++F E + S L H+FFA+R +SKV ++ D LK
Sbjct: 234 ECIEAALNTPFDEGLKVERRLFVECMQSSQSGALQHMFFAERMSSKVKDLPKDTQLK--D 291
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+++V +IGGGLMG GIA + I V L E++ E L +G I N V++GKLT +
Sbjct: 292 IKRVGIIGGGLMGGGIAMNFVNVGIPVTLLEISQEALQRGKDLIAKNYAMTVSKGKLTVE 351
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
A M+ G DY++ D+D+VIEAV E++ +K+++F++L+ C ILA+NTS D
Sbjct: 352 LATQRQDMITGTTDYNDLADMDLVIEAVFENLDIKKQVFAKLDNVCKQGAILASNTSYQD 411
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
+N++ + TS +IG HFFSPA+VM LLEIVR + TS +V+ M + K IKKVP +
Sbjct: 412 VNLIAQSTSRPQDVIGLHFFSPANVMKLLEIVRGDETSDEVVATSMAIAKSIKKVPALSR 471
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y++ A+L + G ID+ ++ FG+ +GP G
Sbjct: 472 VCYGFIGNRMLRHYAREAQLCLLEGSTPQNIDAVMQKFGMAMGPLAVG 519
>gi|198426800|ref|XP_002125215.1| PREDICTED: similar to enoyl-Coenzyme A, hydratase/3-hydroxyacyl
Coenzyme A [Ciona intestinalis]
Length = 731
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 293/530 (55%), Gaps = 22/530 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPP+NAL+ + L +EA S + V +IVL G+G F G DI F K
Sbjct: 10 VAVIAVDNPPMNALSHHVRKSLLKYLKEAESDEKVTSIVLCGDGRTFPVGADIKEFHK-- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
VS + ++ +V+ +E KKP +AA+ G ALGGGLE+A+GCH RIA +++GLP
Sbjct: 68 ---SVSKLGPTILD-IVDALEKSKKPTIAAIHGNALGGGLEIALGCHYRIAMTNSKVGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS------EE 188
E+ LG++PG GGTQRLPR++GL A++ + ++ G LGLID VV
Sbjct: 124 EVKLGILPGAGGTQRLPRVIGLDNAMQWIAYGGHHSAGIGASLGLIDRVVPQGGNIREHA 183
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+L + RR I S+ K+ SL A+ + ++++ AP + CL
Sbjct: 184 ILFAKAAVGKSLGQRRLSNI-SVPDAAKVESLM-AKHLKEVSKKSRGALAPIV-----CL 236
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDI-GLKP 305
VI+ + G+ E + L+ SR ++ FFA+R SK VP VT+ P
Sbjct: 237 QVIKSSALLSYQEGLESERQGMFTLLASSQSRAQIYSFFAERQVSKWSVPGVTNYQNAVP 296
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
V+ V V+G G MG GIA + + E+N++ G+K I + + R ++
Sbjct: 297 MKVKAVGVVGLGTMGRGIAICCLRAGKITYVLEMNTKAQTAGVKYIRGYIETMRKRKQIN 356
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+++ L V +Y+ K+VD+VIEAV ES+ +K++IF +LEK C P ILA+NTST
Sbjct: 357 DQQSSMMNNALIPVDNYNGLKNVDLVIEAVFESMKIKKEIFKKLEKVCKPSAILASNTST 416
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
++++ + T ++ G HFF+PAH+M LLE +R E++S + I +M +GK ++K V+
Sbjct: 417 LNIDEMASVTKRPQKVAGMHFFAPAHIMMLLENIRGEKSSPETIATIMDLGKQMRKTTVL 476
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VGNC GF NR F Y+ + L+ G ++D + +G +G FQ G
Sbjct: 477 VGNCHGFVGNRMFAYYTAESSFLLEEGAYPKQVDDVLLDYGFAMGRFQVG 526
>gi|167568599|ref|ZP_02361473.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia oklahomensis C6786]
Length = 708
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 276/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSAAVRRGLVDALDAADADAAVAAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G LGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGATLGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+++ML + ++EE LGLID + S++ L
Sbjct: 129 GLPEVRLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLIDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A ++ A P +R L + A L AR K + + +D +
Sbjct: 189 EGLAYAQELLAAGAP-VRRTRDAQGLADRAAAEAALDAARADVAKKSRGLFSPAKIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFA+R +K P T G PR V ++
Sbjct: 248 AAALAQPFDEGLRAERRLFLECLDSPQRAGLVHAFFAEREAAKSPE-TRRG-APRPVERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGLPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDIDEI 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + K +KK+PV G C G
Sbjct: 426 AASVERASDVIGLHFFSPANIMKLLEVVVPAQVSADVVATAFELAKKLKKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID A+R FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAVREFGFPMGPYQ 527
>gi|53718058|ref|YP_107044.1| trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
pseudomallei K96243]
gi|126452416|ref|YP_001064753.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|217419418|ref|ZP_03450924.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242317764|ref|ZP_04816780.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|254295974|ref|ZP_04963431.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|386863120|ref|YP_006276069.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403517122|ref|YP_006651255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
gi|418537788|ref|ZP_13103423.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|418542107|ref|ZP_13107563.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|418548433|ref|ZP_13113547.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|52208472|emb|CAH34407.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei K96243]
gi|126226058|gb|ABN89598.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|157806255|gb|EDO83425.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|217396722|gb|EEC36738.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242141003|gb|EES27405.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|385349704|gb|EIF56271.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|385356414|gb|EIF62523.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|385358086|gb|EIF64114.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|385660248|gb|AFI67671.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403072766|gb|AFR14346.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
Length = 708
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 278/522 (53%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|383769235|ref|YP_005448298.1| fatty oxidation complex alpha subunit [Bradyrhizobium sp. S23321]
gi|381357356|dbj|BAL74186.1| probable fatty oxidation complex alpha subunit [Bradyrhizobium sp.
S23321]
Length = 698
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 282/524 (53%), Gaps = 11/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAIADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E++ + E+ KPIVAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 K-------PPKPPGLNEVLAEM-ENSPKPIVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVASMTKKSRGLEAPFAAADAV 239
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A++G G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPAK 358
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALITGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR + + L+ G ++D+ + FG+P+GPF G
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMG 522
>gi|262196642|ref|YP_003267851.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262079989|gb|ACY15958.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 752
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 302/571 (52%), Gaps = 47/571 (8%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGG 59
A V++ VG+DGVA++T+ P PVN L ++A + V+A ++++G
Sbjct: 6 AKSVSIRVGDDGVAVVTIDVPGQPVNTLRSELIAEFDAALSALEGDEQVRAAVIVSGKER 65
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI +++ A D + + E L + P+VAA+ G LGGGLELA+
Sbjct: 66 GFVAGADIKELERIETAADGEAVSRSAQERFARLA-GFRVPVVAAIHGDCLGGGLELALA 124
Query: 120 CHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+A A +T LGLPE+ LG++PG GGTQRLPRL+GL A++M+L K + +++ L
Sbjct: 125 CHGRVASDADETSLGLPEVQLGLLPGAGGTQRLPRLIGLQAALDMILTGKRLRAKKARAL 184
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA----RE-------- 225
GL+D VV + L + +R AL +A R + R K G+LS RE
Sbjct: 185 GLVDLVVPAAVLERAARQHALQLAEARAALRK--QRAGK-GALSRMAATMREAVRGVNLS 241
Query: 226 ------VLKLARLQAK------------KTAPNMPQHQACLDVIEEGIV--HGGYSGVLK 265
VL+ RL K KT N P + L+ + G GY+
Sbjct: 242 GDLQELVLEDNRLGRKVVFDTARKKLLAKTQGNYPAPEKALEAMRLGAAKPEDGYAA--- 298
Query: 266 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL--KPRGVRKVAVIGGGLMGSGI 323
EA+ F EL + + L+ +F A A K V+ G +PR VRKVA++G GLMG+GI
Sbjct: 299 EARFFGELAVSPEANELIQIFLATTALKKDSGVSGQGAEARPRPVRKVAMLGAGLMGAGI 358
Query: 324 ATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382
A V LK+ + + +G++ + V G + R +L+ + + + DY
Sbjct: 359 AYVSAAKAGAQVRLKDRDPASVGRGLRAVREIVDGQLKRKRLSARQRLELMNRVTPTTDY 418
Query: 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 442
S F D D++IEAV E + LK++I +E+E AC P I A+NTSTI + + E ++ + +I
Sbjct: 419 SGFGDADVIIEAVFEDLALKRRIVAEVEAACGPETIFASNTSTIPIGRIAEASTRPETVI 478
Query: 443 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 502
G H+FSP MPLLEI+ TE+T+ V + +GK K +VV + GF +R PY
Sbjct: 479 GMHYFSPVDKMPLLEIIVTEQTAPWVTATCVALGKAQGKTVIVVRDSVGFYTSRILGPYM 538
Query: 503 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
A +++ GV V RID A+ FG P+GP +
Sbjct: 539 NEAFHILAEGVSVERIDRALVDFGFPVGPVK 569
>gi|146278866|ref|YP_001169025.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter
sphaeroides ATCC 17025]
gi|145557107|gb|ABP71720.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides ATCC 17025]
Length = 673
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 197/531 (37%), Positives = 276/531 (51%), Gaps = 37/531 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A++TL NPPVNAL + L E + D V+A+VLTG G F GG DI F +
Sbjct: 12 DQIALLTLANPPVNALGRAVRQKLAALASELEADDSVRAVVLTGEGRVFVGGADIGEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP VAA+ G ALGGG ELA+GCH RI A + +LG
Sbjct: 72 PP---EEPHLPDV-----IAAIEAARKPWVAALNGAALGGGAELALGCHYRIFAKEARLG 123
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE LG+IPG GGTQRLPR +GL+ AIE++ ++++++E GL D
Sbjct: 124 LPETALGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSADEAQDAGLAD----------- 172
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNMP 242
R+ A D+ A + + R+L G L + LA R + K A P
Sbjct: 173 -RIAAGDLIAEAQAFARTLD-----GPLPQPAGAASLADPGPAFWEEARARIAKAARGNP 226
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
A L+ I G+ G +G+ E + F L D + L H+FFA+RA + + I
Sbjct: 227 APVAALEAIHVGVTEGFAAGLRAERETFLRLRGSDEAAALRHLFFAERAAVRPAALRSI- 285
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+P + ++ VIGGG MGSGIA A + L E + L GIK + A VTRG
Sbjct: 286 -EPAPMARIGVIGGGTMGSGIAAAIAAAGLEATLAETGPDALEAGIKRVRAIFEAQVTRG 344
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+ A + L + G + D D+VIEAV E + +K+++F +L + C P ILATN
Sbjct: 345 LTDRAGAADRLARVSGTVGLGPLADCDLVIEAVFEDLAVKRRVFEDLTRLCRPDAILATN 404
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D + + DR I HFFSPA VM LLEIV T+++ + + + K+
Sbjct: 405 TSYLDPERIVAGLPNPDRFIALHFFSPAQVMKLLEIVPLVATTSRTLATGFALAARLGKI 464
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PV GN GF NR Y A L+ G +D A+R+FG +GPF+
Sbjct: 465 PVQAGNGEGFIGNRILKRYRAEAEALLFAGASPSEVDQAMRAFGFGMGPFE 515
>gi|344282369|ref|XP_003412946.1| PREDICTED: peroxisomal bifunctional enzyme-like [Loxodonta
africana]
Length = 723
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 288/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D VA I L NPPVNA++ ++ G+K+ ++A VKAIV+ G G FS G DI+ F
Sbjct: 8 RDYVARIRLRNPPVNAISKAVIYGIKEGLQKAVGDHRVKAIVICGADGHFSAGADISSFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ D+SL P +V+ I+ +KP+VAA++G+ALGGGLE+A+GCH RIA + +
Sbjct: 68 APRSS-DLSLGP------LVDDIQRSEKPVVAAIQGVALGGGLEVALGCHYRIAHTEAHI 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++P GTQ LPRL+G+ A++++ + + + E KLG++D VV S EE
Sbjct: 121 GLPEVTLGILPAARGTQLLPRLIGVPAALDLITSGRHVPAYEALKLGIVDEVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+K++ R+ + +RR KP ++SL D + A L+ +K P
Sbjct: 181 AIKLAQRVLDQPLESRRLCNKP-VQSLPNMDA---------IFNEALLKMRKQYPGCLSR 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+ C+ ++ + + G+ KE ++F L +R L + FFA++ +K + K
Sbjct: 231 ETCVLGVQAAVCYPYEVGIKKEEELFMYLRESGQARALQYAFFAEKVANKWSIPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R + V V+G G MG GI + I V+ E + + L K I + + +
Sbjct: 291 TASARPISSVGVLGLGTMGKGIVISLARARIPVIGVESDKQQLETANKVINSFLEKEAS- 349
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
K+ QD ++ + E VD+VIEAV E + LK+K+F+EL C P L T
Sbjct: 350 -KMQQDGHPWSIPKPRLTTSMKELGGVDLVIEAVFEEMSLKKKVFAELSAICKPETFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + +IGAHFFSPA VM LLE++ + TS + +M++ K +KK
Sbjct: 409 NTSALDIDKIASAADRPHLVIGAHFFSPAQVMTLLEVIPGKYTSPTTVATVMSLAKKMKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC F NR PY + L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFAFVGNRMLAPYYNQSYFLLEEGSKPEEVDRVLEEFGFKMGPFR 520
>gi|334343134|ref|YP_004555738.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103809|gb|AEG51232.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 703
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 282/520 (54%), Gaps = 14/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ I NPPVNAL I + GL EE + VKAIVL G F G DI F K
Sbjct: 16 IGFIISDNPPVNALGIAVRQGLVGALEELDADPAVKAIVLYCAGRTFFAGADITEFGKPR 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +++ V+ +E+ KP+VAA+ G ALGGGLE A+GC R+A P ++GLP
Sbjct: 76 QS--------PTLQDVIAALENSTKPVVAAIHGTALGGGLETALGCAFRVAIPSAKVGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+ G GGTQRLPRL+G KA+E +L K + +++ +LG++DAV + + +
Sbjct: 128 EINLGLFAGGGGTQRLPRLIGPEKALEHVLSGKPVGAKQALELGIVDAVEDGDPAV-IGA 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVIE 252
+A + + P + R +KL + ++ + LA+ L A+ PQ A +D I
Sbjct: 187 AFARRVIDEKIPAVPVRDRDEKLAETRADPSDFDALAKKLTARSKGQLAPQ--ANIDSIR 244
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +A +EL+ SR L H+FFA+R +++P + + K R V+K A
Sbjct: 245 RSFTMGLDEAMAVDAVANRELMAGSQSRALRHLFFAEREAARIPGLPETA-KARPVKKAA 303
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
+IG G MG GIA I V + + + L +G+ + N V RG + Q + +
Sbjct: 304 IIGAGTMGGGIAMCFAGAGIAVTVIDTTQDALDRGLDRVRGNYATSVKRGSIAQAQMDER 363
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
L ++ G D + D D+VIEAV E + +K++IFS+LEK P ILA+NTS +D++ +
Sbjct: 364 LALITGATDRAAAADADIVIEAVFEDMDVKKEIFSDLEKRVKPGTILASNTSALDVDEIA 423
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
+ +G HFFSPA+VM LLE+V + +S IL M VGK I KV V GNC GF
Sbjct: 424 SVLERPEDFVGMHFFSPANVMKLLEVVVAKHSSPDAILTAMAVGKAIGKVSVWSGNCDGF 483
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR S A L+ G ++D+A+ + G P+GP
Sbjct: 484 IGNRMVAKRSAQAERLLQQGAFPQQVDAALTNLGFPMGPL 523
>gi|77465534|ref|YP_355037.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|77389952|gb|ABA81136.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodobacter sphaeroides 2.4.1]
Length = 655
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 278/529 (52%), Gaps = 31/529 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL++ + L E + + V+A+VL G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALSLAVRQRLAALTAELEADESVRAVVLAAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---E 188
GLPE +LG+IPG GGTQRLPR +GL+ AIE++ +++++ E + GL D + E E
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELIPE 182
Query: 189 LLKVSRLW--ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
L +R AL + A P D + + + P A
Sbjct: 183 ALAFARTLDGALPLPASAAPL------ADPGPAFWDEARARIARAARGN------PAPAA 230
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
L+ I G+ G +G+ E + F L D + L H+FFA+RA + + G++P
Sbjct: 231 ALEAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR--GIEPV 288
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ + VIGGG MGSGIA A + V L E E L G++ +EA V RG LT
Sbjct: 289 PLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKRG-LT- 346
Query: 367 DKANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
D+A A +M + G + D D+VIEAV E + +K+++F EL + C P ILATNTS
Sbjct: 347 DRAGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTS 406
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D + E R I HFFSPA VM LLEIV T+ + + + + + K+PV
Sbjct: 407 YLDPERIVEGLPHPHRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARLGKIPV 466
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GN GF NR Y A L+ G ID A+R+FGL +GPF+
Sbjct: 467 QAGNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFE 515
>gi|395492969|ref|ZP_10424548.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26617]
Length = 681
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 186/526 (35%), Positives = 281/526 (53%), Gaps = 22/526 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GL+ +E + VKA+V+ +G F G DI F
Sbjct: 14 HDDVLVIISNNPPVNALGAAVRQGLEAGIKEGLANPQVKAMVIRCDGRTFFAGADITEFG 73
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M + + VV++IE KP+VAA+ G ALGGG E+ +GCH RIA P ++
Sbjct: 74 KP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGCHYRIAVPSAKI 125
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LG++PG GGTQRLPR+ G+ A+E+ I ++ GLID + L
Sbjct: 126 GTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLIDRLANENNLEA 185
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 247
+ +A ++A KP R+ DK+ ++ V + AK+ AP + AC
Sbjct: 186 DAIAFACEVA-DTKPLPRA---RDKVAQ-ADPEAVAAFKKDNAKRFRGFEAP--AANIAC 238
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
++ +G G+ E + F +L+M S H+FFA+R +K+ + D + R
Sbjct: 239 VEKATDGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKIDGI-DPKIPLRE 295
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+++V VIG G MG GI+ + I V + E+ E L +G TI N +G+L +
Sbjct: 296 IKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAATIRKNYEASAAKGRLKPE 355
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ A+ L D+ D D++IEAV E++ +K++IF+ L+ P ILA+NTS +D
Sbjct: 356 QVEQAMGALTPTFDFEALADCDLIIEAVYENMDVKKEIFTRLDAIAKPGAILASNTSYLD 415
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR +T V+ +M + K I+KV VV G
Sbjct: 416 IDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALSKTIRKVAVVAG 475
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR P A L+ G +ID +FG+P+GPFQ
Sbjct: 476 VCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQ 521
>gi|390450411|ref|ZP_10236003.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
gi|389662484|gb|EIM74046.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
Length = 690
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 292/524 (55%), Gaps = 17/524 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++G+A++TL NPPVNAL + A L + E + D V+AIV+ G F G DI+ F
Sbjct: 10 DNGIAVLTLDNPPVNALGHALRAPLFEALGEMNADDAVQAIVIACAGRTFIAGADISEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PD+ + +E KP VAA+ G ALGGGLELA+GCH RIA +
Sbjct: 70 K---PPKEPSLPDL-----IEKLESIDKPTVAAIHGTALGGGLELALGCHYRIADRSAMI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GGT RLPRLVG A++M++ K I +E +LG +D V S+ LL
Sbjct: 122 GLPEVNLGLIPGAGGTVRLPRLVGPEAALKMIVSGKPIGMDEAVRLGAVDRVAESD-LLA 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKK-TAPNMPQHQACLD 249
+ +A D+AA +KP I R++KL L+ E +K+A +A+ TAP H A +
Sbjct: 181 EAVAFARDMAASKKPHIHIRARSEKLAIDLAAFDEAVKVATKKARGLTAP----HTAA-E 235
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ I + + +E ++F E + S H+FFA R ++VP + + R +
Sbjct: 236 AVRNAITMEFDAALDRERELFLERRDSEESAAQRHLFFATREATRVPGIPR-ETEARKIA 294
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+ VIG G MG+GIA A I V + E+N + + +G+ I+ G + RG +T ++
Sbjct: 295 RAGVIGAGTMGAGIAMALANGGIPVTILEMNEDAIARGLAHIDKTYAGSLKRGSITAEEK 354
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y++ D D+VIEAV E + +K+++F+ L+ P ILA+NTS +D+N
Sbjct: 355 EARTGRISGTTHYADLADCDIVIEAVFEEMGVKRQVFTALDGMLKPGAILASNTSYLDVN 414
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPAHVM LLEIVR E T+ VI + + + I KVPVVVG C
Sbjct: 415 EIAATTKRPQDVVGLHFFSPAHVMKLLEIVRGEETAPDVIKTALALARKIGKVPVVVGVC 474
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR + L+ G ++D FG P+GPFQ
Sbjct: 475 NGFVGNRMLAARREQNEDLLLSGATPEQVDRVFTDFGWPMGPFQ 518
>gi|419960863|ref|ZP_14476875.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
opacus M213]
gi|414573746|gb|EKT84427.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
opacus M213]
Length = 687
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 277/521 (53%), Gaps = 22/521 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + DDV AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDDVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG+IPG GGTQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAQ 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
R A R K +R+L ++ EV ++A ++ A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRAA--RPQTVAAVGAI 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG+GIA A + + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLQHTYQGMVTRGRLTESDAQH 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L +L + ++ D+VIEAV E + +KQ + +LE P H LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVIEAVYEDLEVKQTVLRQLEAVLPTHVPLATNTSYLDVNEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + Y + L++ G ++D+A+ FG +GPF
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPF 518
>gi|319763962|ref|YP_004127899.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330823774|ref|YP_004387077.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317118523|gb|ADV01012.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329309146|gb|AEB83561.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 702
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 293/523 (56%), Gaps = 20/523 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
G A+ITL NPPVNA+ + L E A + V +IV+ G G F GG D+ F
Sbjct: 11 GSAVITLSNPPVNAMGHAMRQELAAHLEAAWADPQVHSIVIIGAGKLFCGGADVKAFNTP 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+ + S +V IE KP++AA+ G ALG GLE AMGCH R+A +LGL
Sbjct: 71 ------ASRAEPSSRTIVKQIEASAKPVIAAIHGSALGLGLEFAMGCHYRVAQRGAKLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRL G+ A+ M++ S+T++E KLGL+D V ++ELL +
Sbjct: 125 PEVKLGLLPGGGGTQRLPRLAGVEAALRMIVEGNSVTADEALKLGLVDEV-AAQELLPAA 183
Query: 194 RLWALDIAARRKPWIRSLHRTD---KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+A ++AR + + S + + G R+ L K+ +P CL
Sbjct: 184 LAFAARMSARSEHPVASRRQAQAPAEAGWFDAQRDKLH-------KSKRGLPAPLECLAC 236
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVR 309
+E + G+ E + F LV S+ L H+F A+RA +K+ + D + P VR
Sbjct: 237 VEAAVNLPFDEGMKFERERFDVLVNGTESKALRHLFLAERAAAKIAGLAADTPVIP--VR 294
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
VAVIG G MG GIA + I V+L E E L +G+ TI N G V +GKL +++A
Sbjct: 295 SVAVIGAGTMGGGIAMSFANAGIPVMLIEAAQEALDRGMATIAKNYDGTVAKGKLAREEA 354
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ L + L++ D D+VIEAV ES+ +K+++F +L+ C ILATNTS +D+N
Sbjct: 355 DARLARITPTLEFERVADADLVIEAVFESMEVKKELFRKLDALCKADAILATNTSRLDVN 414
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T+ +IG HFFSPA+VM L+E+VR + T+ VI M V + I K+PV+VG C
Sbjct: 415 EIAATTARPASVIGLHFFSPANVMRLVEVVRGQATAPSVIASSMAVSRQIGKLPVLVGVC 474
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR Y++ A L+ G ++D+A++ FGL +G F
Sbjct: 475 DGFVGNRMVGQYAREAEFLLEEGASPQQVDAALQKFGLAMGRF 517
>gi|332561192|ref|ZP_08415510.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Rhodobacter
sphaeroides WS8N]
gi|332274990|gb|EGJ20306.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Rhodobacter
sphaeroides WS8N]
Length = 655
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 274/525 (52%), Gaps = 25/525 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F +
Sbjct: 12 DGIALLTLANPPVNALGLAVRQRLAALTAELEADESVRAVVLTAEGRVFVGGADIAEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +LG
Sbjct: 72 PP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARLG 123
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---EL 189
LPE +LG+IPG GGTQRLPR +GL+ AIE++ +++++ E + L D + E E
Sbjct: 124 LPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREADLADRIAAGELIAEA 183
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKKTAPNMPQHQACL 248
L +R LD A L R L++ AR + + A P A L
Sbjct: 184 LAFAR--TLDGA---------LPRPASAAPLADPGPAFWDEARARIARAARGNPAPAAAL 232
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
+ I G+ G +G+ E + F L D + L H+FFA+RA + V G++P +
Sbjct: 233 EAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALR--PVALRGIEPVPL 290
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ VIGGG MGSGIA A + V L E E L G+ +EA V RG +
Sbjct: 291 TRAGVIGGGTMGSGIAAALAAAGLEVRLAETGPEALAAGLGRVEAIFEAQVKRGLTDRAG 350
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A + + G + D D+VIEAV E + +K+++F EL + C P ILATNTS +D
Sbjct: 351 ATERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTSYLDP 410
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ E R I HFFSPA VM LLEIV T+ + + + + + K+PV GN
Sbjct: 411 ERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARLGKIPVQAGN 470
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y A L+ G ID A+R+FGL +GPF+
Sbjct: 471 GEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFE 515
>gi|227823146|ref|YP_002827118.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sinorhizobium fredii NGR234]
gi|227342147|gb|ACP26365.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sinorhizobium fredii NGR234]
Length = 710
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 284/532 (53%), Gaps = 19/532 (3%)
Query: 4 PRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
P +T+ + G VA++T+ NPPVNAL+ + GL D E + VKA+VLT G F
Sbjct: 23 PNMTVSIEQIGEVAVVTVDNPPVNALSQAVRQGLLDAVEALDADPFVKAVVLTCAGRTFI 82
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G D+ F K +PD+ V IE KKP VAA+ G ALGGG E+A+GC
Sbjct: 83 AGADVGEFGKPPTP---PHLPDL-----VARIERAKKPWVAAIHGSALGGGFEVALGCRF 134
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
R+A +GLPE+ LG++PG GGT RLPRL G+ A++M+ I + + GL+D
Sbjct: 135 RVATASASVGLPEVRLGLVPGAGGTVRLPRLAGVETAVDMVTAGAPIGARTACEAGLVDT 194
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
V+ ++L+ + +A + R P +L S + + + K
Sbjct: 195 VI-EDDLVAGAVTFARTVLDR--PLPDALRDRSVAASSAGFWDAAAGSVAARAKREEAPL 251
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+ AC+ E + + E + F L + L HVFFA+RA ++ P + G
Sbjct: 252 RALACVRRAAEADFE---TAIAFERETFLALRGSAQAAALRHVFFAERAATRPPELA--G 306
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+ PR + AVIGGG MG+GIA A + VVL E + + +G+ + A G RG
Sbjct: 307 VIPRTIGSAAVIGGGTMGAGIAAALRDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRG 366
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+++ D A + + G DY+ D+D+V+EAV E + +K+++F L AC +LATN
Sbjct: 367 RMSADAAAERMAGVIGTTDYAALADIDLVVEAVFEDLDVKREVFRRLAAACRAEAVLATN 426
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D + E S DR +G HFFSPA VM LLEIV T+ TS VI + +I+ K+
Sbjct: 427 TSYLDPERIAEGISRPDRFLGLHFFSPAQVMKLLEIVPTKATSPDVIAAGFALARILNKI 486
Query: 483 PVVVGNCTGFAVNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PV G C GF NR Q+ RLL+S G +D+A+R+FGLP+GPF+
Sbjct: 487 PVRAGICDGFIGNRILKVTRVQAERLLLS-GATPAAVDAAMRAFGLPMGPFE 537
>gi|390567210|ref|ZP_10247558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389940910|gb|EIN02691.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 706
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 285/517 (55%), Gaps = 11/517 (2%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVNAL + L+D + A DV A++L G G F GG DI F
Sbjct: 20 VVTVDNPPVNALGANVRRQLRDAIQAAEKDPDVDAVLLVGAGRNFIGGADIREF------ 73
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
G L P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLPE+
Sbjct: 74 GKPPLPP--SLPEVCNTIEACRKPVVAAIHGAALGGGLEVALAAHFRIALGAARLGLPEV 131
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
TLG++PG GGTQR PRLVG A+++ML + + ++E LGL+D V ++++L +
Sbjct: 132 TLGLLPGAGGTQRAPRLVGAKAALDLMLSGRHVGAKEAHALGLVDLVGETDDVLAEGLAY 191
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
+ + P +R D L + +R ++ AR ++ K + + +D ++ +
Sbjct: 192 VQALLDAQAP-VRRTRDADGLADRAASRAAIEAARAESSKKSHGLFSPLKIVDAVQAALE 250
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 316
G+ E ++F + + GL+H F A+R K P + KPR + V V+GG
Sbjct: 251 LPFDDGLRHERQLFLQCLDSPQRAGLIHAFLAEREVLKAPETRNA--KPRKIASVGVVGG 308
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG+GIA A + + V + E + L +G+ IE L+ +G++T + L
Sbjct: 309 GTMGAGIAVAVLDAGLPVTMIERDDVSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARW 368
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
G Y D+VIEAV E + +K +F++L++ C P +LATNTS +D++ + S
Sbjct: 369 NGSTSYDALGTADLVIEAVFEEMTVKHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVS 428
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
++G HFFSPA++M LLE+V + SA V+ + K ++KVPV G C GF NR
Sbjct: 429 RPGDVVGLHFFSPANIMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNR 488
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
Y +A ++ G ++ID A+R+FG P+GPFQ
Sbjct: 489 VLAIYRAAADHMMEDGASPYQIDRAVRAFGFPMGPFQ 525
>gi|332215007|ref|XP_003256628.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Nomascus
leucogenys]
Length = 723
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 290/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GG LELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGNVVDEIQRNEKPVVAAIQGMAFGGALELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T ++G HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|404253295|ref|ZP_10957263.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26621]
Length = 681
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 280/526 (53%), Gaps = 22/526 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GL+ +E + VKA+V+ +G F G DI F
Sbjct: 14 HDDVLVIISNNPPVNALGAAVRQGLEAGIKEGLANPQVKAMVIRCDGRTFFAGADITEFG 73
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M + + VV++IE KP++AA+ G ALGGG E+ +GCH RIA P ++
Sbjct: 74 KP--------MQEPGLPTVVDMIEASDKPVIAAIHGTALGGGCEVTLGCHYRIAVPSAKI 125
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LG++PG GGTQRLPR+ G+ A+E+ I ++ GLID + L
Sbjct: 126 GTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLIDRLANENNLEA 185
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 247
+ +A ++A ++L R + + V + + AK+ AP + AC
Sbjct: 186 DAIAFAREVAD-----TKTLPRARDKVAQAAPESVAQFKKDNAKRFRGFEAPAA--NIAC 238
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
++ +G G+ E + F +L+M S H+FFA+R +K+ + D + R
Sbjct: 239 VEKATDGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKIDGI-DPKIPLRE 295
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+++V VIG G MG GI+ + I V + E+ E L +G TI N +G+L +
Sbjct: 296 IKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAGTIRKNYEASAAKGRLKPE 355
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ A+ L LD+ D D++IEAV E++ +K++IF+ L+ P ILA+NTS +D
Sbjct: 356 QVEQAMGALTPTLDFDALADCDLIIEAVYENMDVKKEIFTRLDAIAKPGAILASNTSYLD 415
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T ++G HFFSPA+VM LLE+VR +T V+ +M + K I+KV VV G
Sbjct: 416 IDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALSKTIRKVAVVAG 475
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR P A L+ G +ID +FG+P+GPFQ
Sbjct: 476 VCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQ 521
>gi|430003991|emb|CCF19782.1| Peroxisomal bifunctional enzyme [Includes: Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase ;
3-hydroxyacyl-CoA dehydrogenase] [Rhizobium sp.]
Length = 646
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 276/522 (52%), Gaps = 22/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ + NPPVNAL + GL D + V+A+VL G F G D+ F K
Sbjct: 12 IAVVAVNNPPVNALGQMLRQGLWDTVGALDADPSVRAVVLICEGRTFIAGADVTEFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L +V+ IE KP AA+ G ALGGG E+AMGC RIA +G
Sbjct: 70 --------PPVPPHLPDLVDHIEGAAKPWFAAIHGSALGGGFEIAMGCRFRIALDSASVG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GT R PRL G+ A++++ K + + + LGL+DAVV + L
Sbjct: 122 LPEVGLGIVPGASGTVRTPRLAGVEAAVDLVTSGKPVKAAKAAALGLVDAVVMGD-LRSE 180
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ +A R P S + G R+ +++ + AP + ACL
Sbjct: 181 AVAFARAALGRPLPLPLSRRPVETPGPGFWERQEKAISKRARGEAAPL--RALACL---- 234
Query: 253 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
V +S + E F EL + + L HVFFA+RA + ++ +P +R
Sbjct: 235 RKAVEADFSDAMAFERATFLELRSSEQAAALRHVFFAERAAGRPSHLA--AAEPLPIRLA 292
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + + VVL E + E + +G+ I G V RG++T D A
Sbjct: 293 GVVGGGTMGAGIAVALLDAGLPVVLVERDGEAVERGLANIRNVYDGAVKRGRMTPDTAAE 352
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L ++ G DY+ D D+VIEAV E + +K+ +F+EL + C P +LATNTS +D ++
Sbjct: 353 RLSVVTGKTDYAALADADLVIEAVFEEIGVKRAVFAELGRICRPEAVLATNTSYLDPRLI 412
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
E + +R IG HFFSPA+VM LLEIV T+ V+ +G+++ K+PV G C G
Sbjct: 413 AEGLPNPERFIGLHFFSPANVMKLLEIVPVPETAPAVVATGFALGRMLGKIPVQAGICEG 472
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y SA LV GV + ID A+R++G +GPF+
Sbjct: 473 FIGNRILKRYRASAEALVRQGVAIDAIDGAMRAYGFAMGPFE 514
>gi|384101667|ref|ZP_10002704.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383840812|gb|EID80109.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 687
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 277/521 (53%), Gaps = 22/521 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + DDV AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDDVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GGTQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEIPLGMIPGAGGTQRPMRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSPRAQ 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
R A R K +R+L ++ EV ++A +++A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRSA--RPQTVAAVGAI 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG+GIA A + + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLQRTYQGMVTRGRLTESDAQH 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L +L + ++ D+VIEAV E + +KQ + +LE PH LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVIEAVYEDLEVKQTVLRQLEAVLRPHVPLATNTSYLDVNEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + Y + L++ G ++D+A+ FG +GPF
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPF 518
>gi|148553249|ref|YP_001260831.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498439|gb|ABQ66693.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 748
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 279/530 (52%), Gaps = 15/530 (2%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+++ V D + I NPPVNAL + +G+ + + + VKAIVL G F G
Sbjct: 52 KISTRVEGD-IGFIRSDNPPVNALGQAVRSGVVEALDRLNADPAVKAIVLHCEGRTFFAG 110
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K +P E+++ IE+ KP+VAAV G ALGGG E A+GC R+
Sbjct: 111 ADITEFNKPR-------VPPTLQEMIL-AIENSPKPVVAAVHGTALGGGFETALGCPFRV 162
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P ++GLPE+ LG+ G GGTQRLPR++G KA+E +L K + + + LG++DAV
Sbjct: 163 AVPSARMGLPEINLGLFAGGGGTQRLPRIIGPEKALEFVLSGKPVGAAQALALGILDAVE 222
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+ +A + + P + R D++ + L AK TA + Q
Sbjct: 223 DGAPD-AIGAAFARRVIDEKLPAVAVSRRDDRIAATRADPSAFDA--LAAKLTARSKGQE 279
Query: 245 QACLDV--IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+V + + +A+ + L+ SR L H+FFA+R +++P +
Sbjct: 280 APAANVAAVRRSFTLPFDEAMAIDAEANRALMAGSQSRALRHLFFAEREAARIPGLPK-D 338
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+ R V A+IG G MG GIA I VV+ + E L +G++ + AN V RG
Sbjct: 339 ARARDVASAAIIGAGTMGGGIAMCFAGAGIPVVIVDTTQEALDRGMERVRANYATSVKRG 398
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
++Q++ + L ++ D + D D+VIEAV E + +K++IFS+LEK P +LA+N
Sbjct: 399 SISQEQVDKRLALITPATDRAAVADADLVIEAVFEDMAVKKEIFSDLEKRVKPGTVLASN 458
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + + +G HFFSPA+VM LLE+V+ ++S + IL M VG+ I KV
Sbjct: 459 TSALDVDEIAAALDRPEDFVGMHFFSPANVMKLLEVVQAAKSSPEAILTAMAVGRKIGKV 518
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
PV GNC GF NR S A L+ G ++D+A+ G P+GP
Sbjct: 519 PVWSGNCDGFIGNRMVAKRSAQAERLLQRGAFPPQVDAALTKLGFPMGPL 568
>gi|383873077|ref|NP_001244421.1| peroxisomal bifunctional enzyme [Macaca mulatta]
gi|380790201|gb|AFE66976.1| peroxisomal bifunctional enzyme isoform 1 [Macaca mulatta]
Length = 723
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VV S+ + +
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 192 VSRLWAL----DIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
R + +RR KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+ V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 291 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEAS- 349
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGHPWSGPKPKLTSSMKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|220923283|ref|YP_002498585.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219947890|gb|ACL58282.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 691
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 277/518 (53%), Gaps = 20/518 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ +PPVNAL+ + GL + + V A+V+TG GRF G DI +
Sbjct: 16 VAVITIDHPPVNALSQAVRQGLLAAVRKLDADSSVTALVITGVEGRFIAGADIREMNQPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L+PDV V I+ C KP++AA+ G ALG GLE+A+ C AR+ P QLGL
Sbjct: 76 GE---PLLPDV-----VAAIDACTKPLIAAIGGPALGAGLEIALACDARLGGPAAQLGLT 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG GGTQRLPRLVG+++A+ ++ + + + E LGL+D VVT + LL +
Sbjct: 128 EIRLGLIPGAGGTQRLPRLVGVARAVSLIGEGRVLKAPEAHDLGLLDEVVTGD-LLVAAL 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
A +A RR + + R D A E L +R A+K A ++P +A + VI
Sbjct: 187 ERAPHVAKRRVSEL-PVPRGDA------AAEALAFSR--ARKAAKSVPAIEAAIRVISAA 237
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
SG+ +E F L +R L H+FFA+R KVP + + R V VAVI
Sbjct: 238 HEGDFASGLAQERAAFLALRGSSEARALRHLFFAEREAGKVPGMAEA--VARHVAMVAVI 295
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG+GIA A + V+L E + G+ + V G++++ L
Sbjct: 296 GAGTMGAGIAVALADAGLPVMLVERDDTAASAGLSRVRDLYERQVKSGRISEADVAERLG 355
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ D+S D+++EA E + +K IF L+ +LATNTS +DL+ +
Sbjct: 356 RILPTSDWSCLAAADLIVEAAFEDMAVKADIFRRLDAVAKSGAVLATNTSYLDLDAIAAA 415
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T ++G HFF+PAHVM LLE+VR T+ +VI +T+ + K PVV GNC GF
Sbjct: 416 TCRPQDVVGLHFFAPAHVMKLLEVVRGRATAPEVIATALTLARRAGKQPVVAGNCDGFIG 475
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + Y + A LV G +D+A+ ++G +G F
Sbjct: 476 NRIYAAYRRHAEYLVEDGAAPDAVDAALEAYGFAMGIF 513
>gi|429208178|ref|ZP_19199431.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase [Rhodobacter sp. AKP1]
gi|428188779|gb|EKX57338.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase [Rhodobacter sp. AKP1]
Length = 655
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 280/534 (52%), Gaps = 41/534 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALGLAVRQRLAALTAELEADESVRAVVLTAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE +LG+IPG GGTQRLPR +GL+ AIE++ +++++ E + GL D + E +
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELI-- 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNM 241
P + RT K G+L + LA R + + A
Sbjct: 181 --------------PEALAFARTLK-GALPQPSPAAPLADPGPAFWDEARTRIARAARGN 225
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
P A L+ I G+ G +G+ E + F L D + L H+FFA+RA + +
Sbjct: 226 PAPAAALEAIRVGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR-- 283
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
G++P + + VIGGG MGSGIA A + V L E E L G++ +EA V R
Sbjct: 284 GIEPVPLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKR 343
Query: 362 GKLTQDKANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
G LT D+A A +M + G + D D+VIEAV E + +K+++F EL + C IL
Sbjct: 344 G-LT-DRAGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGSEAIL 401
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D + E R I HFFSPA VM LLEIV T+ + + + + +
Sbjct: 402 ATNTSYLDPERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPMAATAPRTLATGVALAARL 461
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PV GN GF NR Y A L+ G ID A+R+FGL +GPF+
Sbjct: 462 GKIPVQAGNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFE 515
>gi|355559806|gb|EHH16534.1| hypothetical protein EGK_11823 [Macaca mulatta]
Length = 723
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VV S+ + +
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 192 VSRLWAL----DIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
R + +RR KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+ V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 291 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLSTANKIITSVLEKEAS- 349
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGHPWSGPKPKLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|163857274|ref|YP_001631572.1| fatty oxidation complex alpha subunit [Bordetella petrii DSM 12804]
gi|163261002|emb|CAP43304.1| putative fatty oxidation complex alpha subunit [Bordetella petrii]
Length = 705
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 286/529 (54%), Gaps = 25/529 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+ ++T+ +PPVNAL+ + GL D + A S ++AIVL G G F G DI F
Sbjct: 15 HDGILVLTIDHPPVNALSADVRRGLADAIQAAQSDAAIQAIVLVGAGRNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP++AA+ G ALGGGLE+A+ H R+A P +L
Sbjct: 75 KPP---QPPALPDV-----CNAIEASAKPVIAALHGAALGGGLEIALAAHYRVALPGARL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL G + A+++ML + ++E GLID + +
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLAGAAAALDLMLSGRHAGTDEALSWGLIDRIGAGADAQA 186
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSE-----AREVLKLARLQAKKTAPNMPQHQA 246
+A ++ A+ RT L++ A A++Q+++ P
Sbjct: 187 AGLDYARELLAQGA----GPRRTRDAAGLADRPAAQAAIDAARAQVQSRQRGLFSPAK-- 240
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
+D ++ + G+ E +F + + LVH FFA+R T+K P +PR
Sbjct: 241 IVDAVQAALDQPFDEGLRTERALFLQCLDSPQRAALVHAFFAERETAKAPETRQA--RPR 298
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ ++ VIGGG MG+GIA A + + VV+ E N E L +G +E LV +G+L
Sbjct: 299 PLERLGVIGGGTMGAGIAVAMLDAGLPVVMVEQNDEALARGRARVEQVYDLLVKKGRL-- 356
Query: 367 DKANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
D A A +M + G Y D D+++EAV E + +K +F+EL++ P +LATNTS
Sbjct: 357 DAAGKAERMARYTGATRYEALADADLIVEAVFEDMDVKLAVFAELDRIAKPGAVLATNTS 416
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D+N + TS ++G HFFSPA++M LLEIV ++ + + + ++K PV
Sbjct: 417 YLDINRIAAATSRPGDVLGLHFFSPANIMKLLEIVVGANSAPDTVATGFELARRLRKTPV 476
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y Q+A L++ G ++ID A+R+FG P+GP+Q
Sbjct: 477 RAGVCDGFIGNRILAVYRQAADLMLEDGASPYQIDDAVRAFGYPMGPYQ 525
>gi|378827047|ref|YP_005189779.1| protein PimF [Sinorhizobium fredii HH103]
gi|365180099|emb|CCE96954.1| pimF [Sinorhizobium fredii HH103]
Length = 686
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 280/520 (53%), Gaps = 18/520 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++T+ NPPVNAL+ + GL D E + VKA+VLT G F G D+ F K
Sbjct: 11 VAVVTIDNPPVNALSQAVRQGLLDAVEALDAEASVKAVVLTCAGRTFIAGADVGEFGK-- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP +LV IE +KP VAA+ G ALGGG E+A+GC R+A +GLP
Sbjct: 69 -----PPMPPHLPDLVAR-IERARKPWVAAIHGSALGGGFEVALGCRFRVAVASASVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGT RLPRL G+ A++M+ I + + GL+DAV+ ++L+ +
Sbjct: 123 EVRLGLVPGAGGTVRLPRLAGVETAVDMVTTGAPIGARTACEAGLVDAVI-EDDLVAGAV 181
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + R +P +L + E K + AC+ E
Sbjct: 182 AFARTV--RDRPLPDALRDRPVAAPPAGFWEAAAKTTAARAKREEAPLRALACVRRAAET 239
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ + E + F L + L HVFFA+RA ++ P + G+ PR +R AVI
Sbjct: 240 DFE---TAIAFERETFLALRGSAQAAALRHVFFAERAATRPPELA--GITPRTIRSAAVI 294
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA A + VVL E + + +G+ + A G RG+++ + A +
Sbjct: 295 GGGTMGAGIAAALSDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRGRISIEVAAERMA 354
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ G DY+ D+D+VIEAV E + +K+ +F L AC +LATNTS +D + E
Sbjct: 355 GVIGTTDYAALADIDLVIEAVFEDLDVKRDVFRRLAAACRDDAVLATNTSYLDPERIAEG 414
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
S DR +G HFFSPA VM LLEIV ++ T+ +V+ + +++ K+PV G C GF
Sbjct: 415 ISRPDRFLGLHFFSPAQVMKLLEIVPSKATAPEVVAASFGLARMLNKIPVRAGICDGFIG 474
Query: 495 NRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR +Q+ RLL++ G +D+A+R+FGLP+GPF+
Sbjct: 475 NRILKVTRAQAERLLLA-GATPAAVDAAMRAFGLPMGPFE 513
>gi|420250967|ref|ZP_14754168.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398059407|gb|EJL51260.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 698
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 284/528 (53%), Gaps = 24/528 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++G+A+ T+ NPP+NAL+I + GL D E A + DDVKA+V+ F G DI+ F
Sbjct: 9 SNGIAVATIDNPPINALSIGVRRGLMDAIERAQAEDDVKALVIACASRTFVAGADISEFG 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + + S+ +++ + KP +AA+ G+ALGGGLELA+ C RIA Q+
Sbjct: 69 KPY--------EEPSLYKILDALGTSSKPSIAAIHGMALGGGLELALSCTWRIAQLNAQI 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--L 189
G PE+ LG++PG GTQ RL G A+++ + +E+ + G+ID +VT ++ L
Sbjct: 121 GQPEVKLGLMPGGYGTQWWLRLAGPQVALDVSTSGNPVPAEQAHEWGVIDYLVTDQDVDL 180
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA-----RLQAKKTAPNMPQH 244
+ + +A D+ ++ +L R LG++ + + LA R + +K +
Sbjct: 181 VSAATAFAQDLISKG-----TLAR--DLGAIKGPVKDVDLAVFEAYRQKNQKKWRGLVAP 233
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
Q +DV+E G E K F+E S L H+FFA+R KVP TD
Sbjct: 234 QKIVDVLEASCALTFDEGCALEKKAFQECEHSPESASLRHLFFAEREAGKVPG-TDKA-T 291
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P ++ VAVIG G MG GIA A + VVL + E L + I I+ N V RG +
Sbjct: 292 PLDIKSVAVIGAGTMGQGIAQACANGGMSVVLVDRTYEALERAIVAIQGNYETSVARGSM 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ KA+ A ++ D D+VIEAV E + +KQ +F +L+ P ILATNTS
Sbjct: 352 ARAKADRAFNLISISSDLVAASKCDLVIEAVFEDLGVKQSVFKDLDAVAMPEAILATNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
T+D++++ T +++G HFFSPAHVM L+E+++ +TS +V ++ V K ++K+ V
Sbjct: 412 TLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKGSKTSDEVSATILKVTKALRKIAV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GN GF NR Y + A L+ G ++ID + FG P+G F
Sbjct: 472 FAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRVLNQFGFPMGLF 519
>gi|171057533|ref|YP_001789882.1| 3-hydroxyacyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
gi|170774978|gb|ACB33117.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Leptothrix cholodnii
SP-6]
Length = 687
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 285/524 (54%), Gaps = 23/524 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV +ITL NPP+N+L + + + E A V+AIVLTG+ FS G D++ F
Sbjct: 10 GVTVITLDNPPLNSLGHVLRSRIVAAIEVAEVDPAVRAIVLTGSPRAFSAGADVSEF--- 66
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G M + + V+ I C KP+VAA++G+ALGGGLELA+ CHAR+A + ++GL
Sbjct: 67 ---GTPRQMAEPILRSVLERIRICTKPVVAALDGVALGGGLELALACHARVALGQARVGL 123
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+TLG+IPG GGTQRLPRL G+ A+ +M + + + L D VV + L++ +
Sbjct: 124 PEITLGLIPGSGGTQRLPRLAGIDLALTLMQGGAPMAAAQLASTSLFDRVV-DDGLIEAA 182
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDV 250
A +A PW + D+L +E + L RL A++ P + A LD
Sbjct: 183 ADVARQLADAGAPWPHA----DRLNLDAEYVATKVSLARQRLNARQRL--QPAYGALLDA 236
Query: 251 I--EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
I G + G + L+ A+ F L+ ++ L + F A+R + ++P+ + +PR V
Sbjct: 237 IGASAGPIDAGLA--LERAR-FLGLIGTTEAQALRYQFKAERDSHRLPDTLQV--EPRKV 291
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
VAVIG G MG+GIA + + V+L E + L +G + I + G V GKL
Sbjct: 292 ATVAVIGAGTMGAGIAICALDATLDVILLEQDETALARGRQRIADHYAGRVAAGKLGAAV 351
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A+ A L G D+ D+VIEAV E + +KQ +F L+ P +LATNTS +D+
Sbjct: 352 ADAAQARLTGTCDWQALARADVVIEAVFEELSVKQDVFRRLDAVARPGAVLATNTSYLDI 411
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + TS ++G HFFSPA VM LLE++R TS + MT+G+ ++KVPV+ GN
Sbjct: 412 DAIAAVTSRPQDVLGLHFFSPAQVMKLLEVIRGAHTSPDAMATAMTLGRTLRKVPVLCGN 471
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR + Y + ++ G +D A+ FG +GPF
Sbjct: 472 AFGFIGNRIYNAYRRQCEFMLEDGAWPEEVDQALTDFGFAMGPF 515
>gi|424902006|ref|ZP_18325522.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
gi|390932381|gb|EIP89781.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
Length = 708
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 274/538 (50%), Gaps = 25/538 (4%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F
Sbjct: 8 APGAVTRERRDKVLVVTIDHPPVNALSAGVRRGLVDALDAADADAAVCAVLIVGAGRNFI 67
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F K + V N IE KP+V A+ G LGGGLE+A+ H
Sbjct: 68 AGADIREFGKPPVP--------PLLPDVCNRIEASGKPVVVALHGATLGGGLEIALAAHY 119
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RIA P +LGLPE+ LG++PG GGTQR PRLVG A+E+ML + +EE LGL+D
Sbjct: 120 RIAVPGAKLGLPEVQLGLLPGAGGTQRTPRLVGAKAALELMLSGRHAPAEEALTLGLVDR 179
Query: 183 VVTSEELLK-----VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK-- 235
+ S++ L V L A +ARR D G A L +A
Sbjct: 180 LAHSDDTLAEGLAYVHELLAAGASARRT--------RDAQGLADRAAAEAALDAARADVA 231
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
K + + +D + + G+ E ++F E + GLVH FFA+R +K
Sbjct: 232 KKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKS 291
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P PR + ++ V+GGG MG+GIA A + V + E + L +G +E
Sbjct: 292 PETRRAA--PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVY 349
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
GLV +G++T L L G Y D+VIEAV E + +K+ +F+EL +AC P
Sbjct: 350 AGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKP 409
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
+LATNTS +D++ + +IG HFFSPA++M LLE+V + SA V+ +
Sbjct: 410 GAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFEL 469
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +KK+PV G C GF NR Y +A ++ G +RID AIR FG P+GP+Q
Sbjct: 470 AKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYRIDRAIREFGFPMGPYQ 527
>gi|430808528|ref|ZP_19435643.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|429499103|gb|EKZ97555.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 696
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 284/522 (54%), Gaps = 13/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ PVN L + + D + A + V+AIVLTG FS G DI F
Sbjct: 13 VAVLSMNKGPVNGLGAALRTAIADAMDRANADPAVQAIVLTGTPRAFSAGADITEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + S P++ V V++ IE KP+VAA+ G LGGGLELA+GCH R+A P QLGLP
Sbjct: 69 GTPNASREPNLRV--VIDQIEGGAKPVVAAIAGQCLGGGLELALGCHFRVALPDAQLGLP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GGTQR+PRL+GL +A+ M+ L ++ LID V + +
Sbjct: 127 EVKIGLLPGGGGTQRMPRLIGLEQAVNMVTLGNPAPAKSFAGTPLIDRVADGDVVAAAVA 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
IAA+ P RT L S + L+ AR + A L+ +
Sbjct: 187 FAQELIAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ G+ E + F L+ SR L H+F A+ A SK+ ++ G R +RKV V
Sbjct: 242 SLTKSFDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGV 300
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++ +
Sbjct: 301 IGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQLEQRM 360
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G L Y++ DVD+VIEAV E++ +K+ +F L+K C ILA+NTS ++L+ +
Sbjct: 361 ALITGTLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIAS 420
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T +IG HFFSPA+VM LLEIVR +T+ V+ M + K IKK+ VV G C GF
Sbjct: 421 FTKRPTDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFI 480
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y +A L++ G +ID A++ FG+ +GP++ G
Sbjct: 481 GNRMLARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMG 522
>gi|327309822|ref|YP_004336720.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326955157|gb|AEA28853.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 703
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 279/520 (53%), Gaps = 15/520 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I L NPPVN L + GL A + D V+A+ L G G F GG D+ F
Sbjct: 22 VAVIRLTNPPVNGLGDTLRTGLAAGIAAAATDDAVRAVTLVGEGKGFCGGADLRQF---- 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + P VS V+ I D KP+VAA+ G ALGGG ELA+ C RIA +GLP
Sbjct: 78 GTPAATAQPTVSE--VLQQIRDLAKPVVAAIHGFALGGGYELALVCSHRIAHRDATIGLP 135
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GGTQRLPRL+G A+E++ ++ + +LG+IDA V +++L +
Sbjct: 136 EVDVGLLPGAGGTQRLPRLIGTDAALELIQNGTTVPAPRAAELGMIDACV-DDDVLDAAL 194
Query: 195 LWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+ D A +P R D L + AR + + + N A +D +E
Sbjct: 195 AYLDDTGVAGAQP------RLDDLPPPAAGDADFAAARRRVRPSTRNGVAQLAAIDCVEA 248
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
G+ E F L+ ++ L H FFA++ +KV ++ D ++PR V ++AV
Sbjct: 249 ATQLPIEEGLPLERASFLRLLESTEAKALRHTFFAEKQAAKVLDI-DRSVQPRPVERIAV 307
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG+GIA A + + V L E + L +GI+ ++ N + +L + L
Sbjct: 308 IGAGTMGTGIAMAFANSGLAVDLIEQDRAALERGIELVQRNYEATAAKRRLDAVQVEQRL 367
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ LD D+V+EAV E + +K+ +F++L+ P +LA+NTS +D++ +
Sbjct: 368 ALITPSLDLDVVAQADLVVEAVFEDMAVKKDVFAKLDAIAKPGAVLASNTSRLDIDELAR 427
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
S +IG HFFSPAHVM LLE+VR E T+ VI M V ++I KVPV+ C GF
Sbjct: 428 SVSRPRDVIGLHFFSPAHVMKLLEVVRGESTADDVIATSMAVARLINKVPVLSKVCEGFI 487
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR PY + A L+ G+ R+D A+ +FGL +GPF+
Sbjct: 488 GNRMLTPYRREADFLLEEGMTPERVDRALETFGLAMGPFR 527
>gi|340028126|ref|ZP_08664189.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Paracoccus sp. TRP]
Length = 646
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 279/529 (52%), Gaps = 17/529 (3%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T+ + G +A++T+ NPPVNAL+ + GL D + +V+A+VL G F G
Sbjct: 1 MTVTIARQGEIAVVTVDNPPVNALSQALRQGLWDAVGTLDADPEVRAVVLICAGRTFIAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
D+ F K +PD+ V+ IE KP VAA+ G ALGGG E+AMGC R+
Sbjct: 61 ADVTEFGKPP---QPPHLPDL-----VDRIEGAAKPWVAAIHGSALGGGFEVAMGCRFRV 112
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P +GLPE+TLG++PG GT R PRL G A+E++ + + +++ GLIDAVV
Sbjct: 113 ALPDASVGLPEVTLGIVPGASGTVRTPRLAGAELAVELVTSGRPMRAQKAAVSGLIDAVV 172
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
T + LL + +A + R P S + A + +A+ AP
Sbjct: 173 TGD-LLDGAVGFAREALTRPLPAPVSARPVAAPDAAFWAEKEKSVAKAAKGAAAPLR--- 228
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
LD + + + + E F EL D + L HVFFA+R + + +
Sbjct: 229 --ALDCLRKAVEAPFPEAMAYERATFLELRGSDQAAALRHVFFAERTAPRPAALRAV--D 284
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P +R+ AVIGGG MG+GIA A + VVL E + + + +GI + G V RG+L
Sbjct: 285 PLPLRRAAVIGGGTMGAGIAAALREAGLPVVLVERDDDAVARGIANLRGIFDGAVRRGRL 344
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+A + + DY+ DVD+VIEAV E + +KQ +F +L + C +LATNTS
Sbjct: 345 GTAQAEELVSGVTATTDYAALADVDLVIEAVFEEIGVKQAVFEQLGRVCRADAVLATNTS 404
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D + +R IG HFFSPA+VM LLEIV TS QV+ + +++KK+PV
Sbjct: 405 YLDPRKIAAGVPGPERFIGLHFFSPANVMKLLEIVPVPETSEQVLATGFALARLLKKIPV 464
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y +A LV GV + ID+A+R++G +GPF+
Sbjct: 465 RAGICEGFIGNRILKRYRAAAEALVRQGVAIAEIDAAMRAYGFAMGPFE 513
>gi|433772523|ref|YP_007302990.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
gi|433664538|gb|AGB43614.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
Length = 686
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 201/532 (37%), Positives = 287/532 (53%), Gaps = 19/532 (3%)
Query: 7 TMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSG 63
++ V N+G VAI+T+ NPPVNAL+ + L RDD V AIV+ G F
Sbjct: 4 SVSVANEGGVAIVTIDNPPVNALSFHVREPLMQAL--VALRDDASVAAIVIACAGRTFVA 61
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI F K M + +V ++E +P VAA+ G ALGGGLELA+GCH R
Sbjct: 62 GADITEFGKP--------MQQPELRAIVAVLEAIARPTVAAIHGTALGGGLELALGCHFR 113
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+A +LGLPE+ LG++PG GGT RLPRLVG +KA++M++ I ++E + GL+DAV
Sbjct: 114 VADQGARLGLPEVKLGILPGGGGTVRLPRLVGAAKALKMIVSGTPIGADEAYGAGLVDAV 173
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ L + +A ++A + P+ R D L A + A L K P
Sbjct: 174 FEGD-LTTHAVNFAREMARKGGPFPPVRDRDDVLKETDLAAFDAEAADLARKARGLEAPI 232
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
AC + + + +E +F +LV D SR H+FFA+R +K+P +
Sbjct: 233 --ACARAVRNAVTLPFDEALAEERALFVKLVASDQSRAQRHLFFAEREAAKLPGKDVV-- 288
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + +V VIG G MG GIA A V L E + E L +G+ TIE N V RG
Sbjct: 289 -KRRIARVGVIGAGTMGGGIAMAFANGGFPVTLLETSQEALRRGLATIEKNYTVSVARGS 347
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
L++D L KG +D+++ D D+++EA E + +K++IF +L+ P ILATNT
Sbjct: 348 LSEDAKRQRLAQFKGTIDHADLADCDLIVEAAFEDMAVKKEIFGKLDAVARPGAILATNT 407
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + TS ++G HFFSPA+VM LLEIVR E+T+ + ++ + + I KV
Sbjct: 408 SYLDIDEIAASTSRPQDVLGLHFFSPANVMKLLEIVRAEKTAPDALATVIDLARRIGKVA 467
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VVVG C GF NR + L+ G +ID A FG P+GPFQ G
Sbjct: 468 VVVGVCHGFVGNRMLAVRGSESEALLLEGATPSQIDKAFTDFGWPMGPFQMG 519
>gi|390167396|ref|ZP_10219386.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589946|gb|EIM67952.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 705
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 292/530 (55%), Gaps = 27/530 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVN L+ + + D E +++ A VL G FSGG DI F
Sbjct: 8 HDGVAVIALDNPPVNGLSHALRCSIVDAVAEVNLNENIVAAVLIGAALPFSGGADITEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G PD+ V+ +E KP+VAA+ G+ALGGGLELA+GCHAR+A ++
Sbjct: 67 ---GTPKSWEQPDLVA--VIEAVEASAKPVVAAIAGVALGGGLELALGCHARVALRNARV 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 190
GLPE+ LG++PG GGTQRLPRLVG+ A++++ + + + G+ A+V E+LL
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRLVGVETALDLITSGRLLPAGAAELKGMFAALVEPDEDLL 181
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQH 244
+V+ A RS+ R+ L S+S + R E+ AR + ++ P
Sbjct: 182 EVASSIA-----------RSVARSGDLPSISSLPPAQPRPEIFDAARARLSRSGERYPAL 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 303
+ +E V +G+ E FK L+ D S+ L H F A+R S V + D+G+
Sbjct: 231 PEIIAAVEAATVLDFAAGMEVEKSAFKRLIETDVSKALRHGFLAERRASHVRAIGADVGV 290
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + AVIG GLMG+GIA I V L E + + ++ K+++ + V +G+
Sbjct: 291 --RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGR 348
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LT +A +++ DY + ++VD+ IEAV ES+ K+ +F EL++ P ILA+NT
Sbjct: 349 LTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNT 408
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
ST+DLN + T ++G HFFSPA+VM LLE+VR +RT+ V+ M G+ I KV
Sbjct: 409 STLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVS 468
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+ G C GF NR Y + A LV G F +D A+ FG +GPF+
Sbjct: 469 VLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALEEFGFSMGPFK 518
>gi|221369540|ref|YP_002520636.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides KD131]
gi|221162592|gb|ACM03563.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides KD131]
Length = 655
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 198/534 (37%), Positives = 280/534 (52%), Gaps = 41/534 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL + + L + + + V+A+VLT G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALGLAVRQRLAALTAQLEADESVRAVVLTAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE +LG+IPG GGTQRLPR +GL+ AIE++ +++++ E + GL D + E +
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELI-- 180
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNM 241
P + RT K G+L + LA R + + A
Sbjct: 181 --------------PEALAFARTLK-GALPQPSPAAPLADPGPAFWDEARARIARAARGN 225
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
P A L+ I G+ G +G+ E + F L D + L H+FFA+RA + +
Sbjct: 226 PAPAAALEAIRVGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR-- 283
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
G++P + + VIGGG MGSGIA A + V L E E L G++ +EA V R
Sbjct: 284 GIEPVPLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKR 343
Query: 362 GKLTQDKANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
G LT D+A A +M + G + D D+VIEAV E + +K+++F EL + C IL
Sbjct: 344 G-LT-DRAGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGSEAIL 401
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D + E R I HFFSPA VM LLEIV T+ + + + + +
Sbjct: 402 ATNTSYLDPERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARL 461
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PV GN GF NR Y A L+ G ID A+R+FGL +GPF+
Sbjct: 462 GKIPVQAGNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFE 515
>gi|345317598|ref|XP_001512869.2| PREDICTED: peroxisomal bifunctional enzyme [Ornithorhynchus
anatinus]
Length = 704
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 281/509 (55%), Gaps = 17/509 (3%)
Query: 28 LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87
+ + + GL+++ ++A VKAIV+ G G+FS G DI F+ G VS++
Sbjct: 7 MCVAVQHGLREELKKAERDSSVKAIVICGADGKFSSGADICGFR----TGKVSVL----- 57
Query: 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGT 147
L+V+ ++ +KP+VAA+EG+A GG LE+++GCH RIA K +G PE+T+G++PG GT
Sbjct: 58 GLLVDELQKMEKPVVAAIEGMAFGGSLEISLGCHYRIAHAKALVGFPEVTIGLLPGARGT 117
Query: 148 QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207
Q LPRL+G+ A++M+ + + + E KLGL+D VV S+ ++ + +A I+ +
Sbjct: 118 QLLPRLIGVPAALDMITSGRHLLAPEALKLGLLDQVVNSD-TVEAAIKFAEQISGQPTES 176
Query: 208 IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEA 267
R +++ ++ L + A L+ +K P +AC+ ++ + + G+ KE
Sbjct: 177 RRIMNK--QVPELPNMDSIFSEAYLKMRKQFPGCISREACVRAVQAAVQYPYPLGIEKEK 234
Query: 268 KVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIA 324
+F+ L ++ L ++FFAQR +K + K + +R AVIG G MG GI
Sbjct: 235 DLFQYLHTSGQAKALQYLFFAQRICNKWSTSSGASWKNSSAQPIRSAAVIGLGTMGRGIV 294
Query: 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384
+ NI V+ E + + L + + + + K+ + + A + + E
Sbjct: 295 VSLARANIPVIAVEQDEKQLELASRMVSFLLE--LEASKMQKSGQSWAAPKPRFTMSLEE 352
Query: 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 444
+VD+VIEAV E + LK+++FS+L C P L TNTS ++++ + T R+IG
Sbjct: 353 LGEVDLVIEAVFEEIGLKKQVFSKLSAICKPEAFLCTNTSALNIDEIASSTRHPQRVIGT 412
Query: 445 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 504
HFFSPAHVM LLE++ R+S I +M++ K +KKV VVVGNC GF NR FPY Q
Sbjct: 413 HFFSPAHVMTLLEVIPGRRSSPTTIATVMSLAKTMKKVGVVVGNCFGFVGNRMLFPYVQQ 472
Query: 505 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
L+ G +D + FG +GPF+
Sbjct: 473 TYFLLEEGSQPEEVDRVLEEFGFKMGPFR 501
>gi|301614191|ref|XP_002936579.1| PREDICTED: peroxisomal bifunctional enzyme [Xenopus (Silurana)
tropicalis]
Length = 727
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 283/529 (53%), Gaps = 25/529 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPPVNAL+ P+ L + E V+AIVL G G+FS G DI F
Sbjct: 11 VAVIKINNPPVNALSTPVCQALIKELAEVKKDPSVEAIVLCGANGKFSAGADIREFSS-- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ VS+E + IE KP+VAA+EG+ALGGGLELA+ CH R+A KT +GLP
Sbjct: 69 -----AARRTVSLEDINAEIESTTKPVVAAIEGVALGGGLELALSCHYRVAHIKTVMGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++P GGTQRLPRL+G+ A+++++ + + + E ++LG++D VV S + +
Sbjct: 124 EVLIGILPAAGGTQRLPRLIGIPAALDIIVRGRHVPATEAFQLGIVDEVVPSSAIAAAVQ 183
Query: 195 LWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ AR+ KP T+ + L A +AK+ AC++ +
Sbjct: 184 M------ARKVIGKPMDSRRLSTNAVQYNINVDAFLDTALEKAKRQFRGAQAPLACIEAV 237
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDI-GLKPRGV 308
G+ KE ++F L + + FF++R K +P+ ++P +
Sbjct: 238 RASAQLPYQRGIEKERQLFASLWATGQPQAQQYAFFSERNVGKWTLPSGERWDNVRPCQI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLVTRGKL 364
R AVIG G MG GI T+ +NI V+ E +++ L G K + E L +G
Sbjct: 298 RTAAVIGLGTMGRGIVTSLSKSNIPVIALEQDTKQLDSGKKAVNSLLEREAEKLKKQGNS 357
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ N L + L++ + K+VD+VIEAV E++ LK+ IF +L P L TNTS
Sbjct: 358 FAE--GNGLGSVHFTLNFEDLKNVDLVIEAVYENMNLKKDIFRKLSSIMKPDAFLCTNTS 415
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T+ +IG HFFSPA++M LLE+VR TS I M++GK++ KV V
Sbjct: 416 GLNIDEIASVTNRPQLVIGTHFFSPANIMRLLEVVRGRHTSPTTIATAMSLGKMLGKVAV 475
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+VGNC F NR PY + A L+ G +D A+ FG +GPF+
Sbjct: 476 LVGNCPLFVGNRMLGPYLEQANYLLEEGYYPEEVDQALEEFGFAMGPFR 524
>gi|355746836|gb|EHH51450.1| hypothetical protein EGM_10819 [Macaca fascicularis]
Length = 723
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 286/533 (53%), Gaps = 31/533 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VV S+ + +
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 192 VSRLWALDIAAR--------RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
R +A ++ + KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIR-FAQTVSDQPLESHRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLA 229
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K +
Sbjct: 230 QEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASW 289
Query: 304 K---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
K + V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 290 KTASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEAS 349
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 350 --KMQQSGQPWSGPKPKLTSSMKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLC 407
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IK
Sbjct: 408 TNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIK 467
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ VVVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 468 KIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|294010130|ref|YP_003543590.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
gi|292673460|dbj|BAI94978.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
Length = 705
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 292/530 (55%), Gaps = 27/530 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVN L+ + + D E +++ A VL G FSGG DI F
Sbjct: 8 HDGVAVIALDNPPVNGLSHALRCSIVDAVAEVNLNENIVAAVLIGAALPFSGGADITEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G PD+ V+ +E KP+VAA+ G+ALGGGLELA+GCHAR+A ++
Sbjct: 67 ---GTPKSWEQPDLVA--VIEAVEASAKPVVAAIAGVALGGGLELALGCHARVALRNARV 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 190
GLPE+ LG++PG GGTQRLPRLVG+ A++++ + + + G+ A+V E+LL
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRLVGVETALDLITSGRLLPAGAAELKGMFAALVEPDEDLL 181
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQH 244
+V+ A RS+ R+ +L S+S + R E+ AR + + P
Sbjct: 182 EVASSIA-----------RSVARSGELPSISSLPPAQPRPEIFDAARARLSGSGERYPAL 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 303
+ +E V +G+ E FK L+ D S+ L H F A+R S V + D+G+
Sbjct: 231 PEIIAAVEAATVLDFAAGMEVEKAAFKRLIETDVSKALRHGFLAERRASHVREIGADVGV 290
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + AVIG GLMG+GIA I V L E + + ++ K+++ + V +G+
Sbjct: 291 --RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGR 348
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LT +A +++ DY + ++VD+ IEAV ES+ K+ +F EL++ P ILA+NT
Sbjct: 349 LTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNT 408
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
ST+DLN + T ++G HFFSPA+VM LLE+VR +RT+ V+ M G+ I KV
Sbjct: 409 STLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVS 468
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+ G C GF NR Y + A LV G F +D A+ FG +GPF+
Sbjct: 469 VLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALEEFGFSMGPFK 518
>gi|170695997|ref|ZP_02887135.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170139077|gb|EDT07267.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 710
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 284/529 (53%), Gaps = 31/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 22 VLLVTIDHAPVNALSADVRRGLLAAIEAADSDRSVEAVLLVGAGRNFIAGADIREFGK-- 79
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 80 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 131
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSE 187
LPE+ LG++PG GGTQR PRL+G A++++L + +++E LGL+D + V +E
Sbjct: 132 LPEVQLGLLPGAGGTQRTPRLIGAEAALDLILSGRHASAKEALALGLVDRLGASGDVLAE 191
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQH 244
L V L A D A RR T G+LS+ + + AR + K + +
Sbjct: 192 GLAYVHELLAGDAAVRR---------TRDAGALSDRAASLAAVAAARAETAKKSRGLFSP 242
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+D IE I G+ E ++F + + GL+H FFA+R K P D K
Sbjct: 243 LKIVDAIEAAITQRLEEGLRVERQLFLQCLDSPQRAGLIHAFFAEREVLKAPETRDA--K 300
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + V V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+L
Sbjct: 301 PRALNAVGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRL 360
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ K + + G Y + D+VIEAV E + +KQ +F+EL++ C +LATNTS
Sbjct: 361 SAVKKDEFMARWTGSTSYDALSNADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTS 420
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D++ + S + G HFFSPA++M LLE+V + SA V+ + K ++K PV
Sbjct: 421 YLDIDAIAASISRPADVTGLHFFSPANIMKLLEVVVPQAVSADVVATAFELAKKLRKTPV 480
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ
Sbjct: 481 RAGVCDGFIGNRILAVYRSAADAMMEDGASPYQIDAAMRAFGFPMGPFQ 529
>gi|114321260|ref|YP_742943.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227654|gb|ABI57453.1| 3-hydroxyacyl-CoA dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
Length = 714
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 284/536 (52%), Gaps = 16/536 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGG 64
+ +G+DG+A+IT+ P +N L +V + + ++ ++ T G F G
Sbjct: 21 LALGDDGIAVITVDVPGERMNVLKGEMVREANALLDTLDEQPALRGVIFTSGKADNFIAG 80
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
D+++ A + L + +E KP+VAA+ G LGGGLELA+ CH R+
Sbjct: 81 ADVHMLAACETAEAARELAHAGQRLF-DRLEAFPKPVVAAIHGTCLGGGLELALACHGRV 139
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
A P T+LGLPE+ LG++PG GGTQRLP VGL A+++ML + + + + K GL+D
Sbjct: 140 ATDHPATRLGLPEVQLGLLPGSGGTQRLPDRVGLPLALDLMLTGRQLRARQARKRGLVDD 199
Query: 183 VVTSEELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237
+V LL +R ++A R+ P L + LG R+ + +QAK T
Sbjct: 200 LVAPPILLDAARKRIDELAEPRRHRPKRPLTTRLLENNPLGRRLVYRQSERT--VQAK-T 256
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
N P +D + G G +G+ E + F EL M +R L+ ++FA A K +
Sbjct: 257 HGNYPAPPRIIDAVRAGRERGRQAGLETERRHFGELAMTPEARALMALYFATTALKK-DS 315
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
TD G++PR VR+V V+G GLMG+GIA V LK++ E L G++ I+ +R
Sbjct: 316 GTDAGVEPRPVRRVGVLGAGLMGAGIAYVTSAKAGTPVRLKDIALEGLNNGMRHIDGEIR 375
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
RG LT +A + LDY F +D+VIEAV E LK ++ +++E P H
Sbjct: 376 ARHKRGALTDFEATRQRTRVTPTLDYRGFGALDVVIEAVFEDPELKHRMLADVEAHGPEH 435
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ ++ + +R+IG H+FSP MPLLE++ T+RT +VI + +G
Sbjct: 436 VIFASNTSSLPISEIATGAQRPERVIGMHYFSPVEKMPLLEVIATDRTDPEVIATTVALG 495
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K +VV + GF VNR PY A L+ GV + ID + FG P+GPF
Sbjct: 496 RTQGKTVIVVRDGAGFYVNRILAPYLNEACRLLQEGVAIDHIDRTLVRFGFPVGPF 551
>gi|288960821|ref|YP_003451161.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
gi|288913129|dbj|BAI74617.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
Length = 728
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 286/530 (53%), Gaps = 20/530 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N+GVA+ITL +PPVNALA+ + L A V+AIVL G G F GG DI F
Sbjct: 20 NEGVAVITLDHPPVNALALALRTRLGAALHAALRDVSVRAIVLAGAGRGFCGGGDITEFD 79
Query: 72 KVHGAGDVSLMPDVSVE----LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+P V E + +LIE+ KP+VAA+ G+ALGGGLELA+ CHAR+A
Sbjct: 80 ----------LPAVCQEPTPATLFSLIENSPKPVVAALHGMALGGGLELALACHARVAEA 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS- 186
+TQ+GLPE+ LG++PG GGTQRLPRLVG A+ +++ ++ ++ GL D +
Sbjct: 130 RTQVGLPEVHLGLVPGAGGTQRLPRLVGFELALNLIVQGRTQPAQSLRDSGLFDRLTDGS 189
Query: 187 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQ 243
E ++V+ A ++A L RT L L+ A+ AR + +P
Sbjct: 190 PVEAAVEVAMALAGELAVPNAA-DGMLRRTGALTPRLANAQAFFAFARATVQSRFRGLPA 248
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
AC+D +E+ + G+ E F L GL H F A+R + + + D G+
Sbjct: 249 PVACVDCVEKAATLPFHEGLAFEHDCFTRLRGTAEFAGLRHAFLAERRAADIRGLPD-GI 307
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
KPR V+ VAVIG G MG GIA + + V L E E L +G+ I + +G+
Sbjct: 308 KPRPVKTVAVIGAGTMGGGIAMSLANAGLAVTLIEREQEALDRGLAIIRQTCESALRKGR 367
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
LT ++A L ++KG + Y + D+VIEAV E + +K+++F +++ +LATNT
Sbjct: 368 LTAEEAAGRLDLIKGCVGYDPVRQADLVIEAVFEDLEVKRQVFEQIDAVARAGTVLATNT 427
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +DL+ + T ++G HFFSPAHVM LLE+VR T+ V+ + + + I K
Sbjct: 428 SMLDLDRIAGFTRRPQDVLGLHFFSPAHVMKLLEVVRGAATAPDVLATAIALARRIGKTS 487
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV G C GF NR PY A L+ G ++D AI +G+ +GPF+
Sbjct: 488 VVSGVCEGFIGNRILQPYLYQAGRLLDEGALPHQVDQAIERWGMAMGPFR 537
>gi|83721254|ref|YP_440951.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167617743|ref|ZP_02386374.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257140395|ref|ZP_05588657.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655079|gb|ABC39142.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 275/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A P R+ + + AKK+ + +D +
Sbjct: 189 EGLAYVHELLAAGAPARRTRDAQGLADRAAAEAALEAARADVAKKSR-GLFSPAKIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFA+R +K P T G+ PR + ++
Sbjct: 248 AAALALPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKSPE-TRRGV-PRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKSVFAELARACKPGAVLATNTSYLDIDEI 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + K ++K+PV G C G
Sbjct: 426 AASVERTPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELAKKLRKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|76810920|ref|YP_332048.1| enoyl-CoA hydratase [Burkholderia pseudomallei 1710b]
gi|254258381|ref|ZP_04949435.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
gi|76580373|gb|ABA49848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1710b]
gi|254217070|gb|EET06454.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 274/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|254187905|ref|ZP_04894417.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
gi|157935585|gb|EDO91255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 274/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|167579665|ref|ZP_02372539.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 275/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+++ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A P R+ + + AKK+ + +D +
Sbjct: 189 EGLAYVHELLAAGAPARRTRDAQGLADRAAAEAALEAARADVAKKSR-GLFSPAKIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFA+R +K P T G+ PR + ++
Sbjct: 248 AAALALPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKSPE-TRRGV-PRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEI 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + K ++K+PV G C G
Sbjct: 426 AASVERTPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELAKKLRKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|134279808|ref|ZP_01766520.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
gi|134249008|gb|EBA49090.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 274/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|126441399|ref|YP_001057503.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|167917354|ref|ZP_02504445.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BCC215]
gi|237810655|ref|YP_002895106.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254196939|ref|ZP_04903363.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|418392585|ref|ZP_12968350.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
gi|418558385|ref|ZP_13122951.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|126220892|gb|ABN84398.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
668]
gi|169653682|gb|EDS86375.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|237504800|gb|ACQ97118.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385363373|gb|EIF69153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|385375227|gb|EIF80015.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 274/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|254181976|ref|ZP_04888573.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
gi|184212514|gb|EDU09557.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
Length = 708
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 274/522 (52%), Gaps = 11/522 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADVAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQ 527
>gi|311108557|ref|YP_003981410.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310763246|gb|ADP18695.1| fatty acid oxidation complex subunit alpha 2 [Achromobacter
xylosoxidans A8]
Length = 702
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 193/529 (36%), Positives = 286/529 (54%), Gaps = 28/529 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
D V ++ L +PP+N L P+ + + + A V+AIVL G G FS G DI F
Sbjct: 14 QDDVLLLGLNHPPLNTLDHPLRQQVHEALQAAAQDASVQAIVLHGAQGNFSAGADIREFD 73
Query: 71 --QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
++ AGDV+ NLI KPIVAA++G+ALGGGLELA+ HAR+ A
Sbjct: 74 QPRQAPWAGDVA-----------NLIAASSKPIVAALQGVALGGGLELALAAHARVGAAN 122
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
+LGLPE+ LG++PG GGTQRLPRL+G + A+ ++L +S+ + LGL+D V
Sbjct: 123 ARLGLPEVKLGLLPGGGGTQRLPRLIGAAAALPLILEGRSVDGKAALTLGLLDQVCDEAS 182
Query: 189 LL----KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
LL + +R D AA R+ + + L +++ RE RL AK ++P
Sbjct: 183 LLDCAVRKARALCADHAAARRGAAAADDKQAGLAAVAAQRE-----RLAAKPH--SLPAQ 235
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
LD ++ + G+ E + F + V +GL H FFA+R K P +
Sbjct: 236 HLLLDCLQAALELPLQEGLKVEREAFLQCVASPEHKGLAHAFFAERLAGKSPAGA---AR 292
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR V++ VIGGG MG+GIA A + + VVL E ++ L G + I+ + V G+L
Sbjct: 293 PRPVQRAGVIGGGTMGAGIAVAMLDAGLDVVLIERDAASLQAGQERIDGVYQRQVNSGRL 352
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
L L DY+ VD+V+EAV E + +K ++F++L++ C P ILATNTS
Sbjct: 353 DAATREQRLSRLSTATDYAALAAVDLVVEAVFEDMDVKTQVFAQLDRVCKPGAILATNTS 412
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D+N + S +IG HFFSPA++M LLEIV E+ + V+ + + + KVPV
Sbjct: 413 YLDINQIARSISRPQDVIGLHFFSPANIMKLLEIVVPEQVADDVVATGFALARRLGKVPV 472
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR + Y ++A ++ G ++ID A+ FG +GPF+
Sbjct: 473 RAGVCDGFIGNRILYVYREAANHMMEDGASPYQIDQALERFGYAMGPFR 521
>gi|398881422|ref|ZP_10636416.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM60]
gi|398201559|gb|EJM88434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM60]
Length = 684
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 284/530 (53%), Gaps = 21/530 (3%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP V ME D VA++ + NPP+NA + + L E + D+++A V+ G G F
Sbjct: 4 APVVHMERDGD-VAVLIIDNPPINAASAQVRRELLLAIERVSGDDNLRAAVIIGQGRGFI 62
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G D+ F + + D + V+ IE C KP+VAA+ G ALGGG ELAMGC
Sbjct: 63 AGSDLREFGQP--------LQDPQLPEVIAAIEACAKPVVAALHGAALGGGFELAMGCDV 114
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RIA+P LGLPE+TLG+IPG GGTQRLPRLVG++ AIE++ + + + K G+IDA
Sbjct: 115 RIASPACLLGLPEVTLGIIPGAGGTQRLPRLVGMAAAIELICSGMRVNAVDALKSGMIDA 174
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ ++L V+ +A A ++P + ++ E+ + L+ A + P
Sbjct: 175 I-ADDDLRTVAVRFAHQ--AHKRPVL-------EMPIPEESPKKLEATCATALRKGRGRP 224
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QA ++ + + + E + F+ L + + L H+FFA+R ++P
Sbjct: 225 AVQAAIEAVLDAARLPAALALSNEREAFQRLRLSPEAAALRHLFFAERGAGRLPEADRA- 283
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+ V +V +IG G MG+GIA A + V L E + L G++ I+A +
Sbjct: 284 -RSIDVEQVGIIGAGTMGAGIAVAFLDGGFSVTLIEQSPAALAAGLERIDAFYARQLHSK 342
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
KLT+ + L+ L + +V+EAV E + +K+++ L+ I+A+N
Sbjct: 343 KLTEKDIHERLQRLHPSCAFEALVACQLVVEAVFEDMAVKRELMMRLDAVLSAETIIASN 402
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +DL+++ ++ D++ G HFFSPA+VMPLLE+VR T++Q + + VGK + KV
Sbjct: 403 TSYLDLDVIAAASARPDKVCGLHFFSPANVMPLLEVVRGAATTSQTLATALAVGKRLGKV 462
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
PV+ N GF NR + Y + L+ G +ID+A+++FG +GPF
Sbjct: 463 PVIAANAFGFIGNRIYAAYRRQCEYLLEDGASPQQIDAAMQAFGFAMGPF 512
>gi|377808341|ref|YP_004979533.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
gi|357939538|gb|AET93095.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
Length = 708
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 281/525 (53%), Gaps = 21/525 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV ++T+ + PVNA+ + GL D + A + +A+++ G G F G DI F
Sbjct: 19 GVLVVTIDHAPVNAINAAVRRGLIDAIDAADANPSARAVLIVGAGRGFIAGADIREF--- 75
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G +L P S+ V N IE C KP++AA+ G ALGGGLE+A+ H RIA +LGL
Sbjct: 76 ---GKPALPP--SLPDVCNRIEACGKPVIAAIHGAALGGGLEVALASHYRIAVEGAKLGL 130
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEE 188
PE+ LG++PG GGTQR RL+G A+ +ML + + ++E +LGL+D V V +E
Sbjct: 131 PEVQLGLLPGAGGTQRSARLIGAQAALSLMLSGRHVGAQEALRLGLVDRVGQSDDVFNEG 190
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L L A A RR R L D + AR + +K + + +
Sbjct: 191 LAYAHELIATQAAPRRTKNARGLADEDASVAAI------AAARAETQKKSRGLLSPLKIV 244
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
D +E + G+ E + F E GLVH FFA+R T K P D K R +
Sbjct: 245 DCVEAALNLPFDEGLRFERERFLECRESPQRAGLVHAFFAERETQKSPETRDA--KAREI 302
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R V V+GGG MG+GIA A + + V + E + L +G +E L+ + ++T +
Sbjct: 303 RAVGVVGGGTMGAGIAVALLDAGLAVTMIERDDASLERGRAHVEKVYDALIAKERITPET 362
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
AL+ L G Y D D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D+
Sbjct: 363 KTRALQRLNGATHYDALADADLVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDI 422
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + S ++G HFFSPA++M LLE+V +R +A V+ + K ++KV V G
Sbjct: 423 DEIAVSISRPQDVLGLHFFSPANIMKLLEVVVPKRVAADVVATGFELAKKLRKVAVRAGV 482
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y +A L+ G ++ID+A+R FG P+GP+Q
Sbjct: 483 CDGFIGNRMLAVYRAAADHLMEDGASPYQIDAAVRDFGFPMGPYQ 527
>gi|119387515|ref|YP_918549.1| 3-hydroxyacyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
gi|119378090|gb|ABL72853.1| 3-hydroxyacyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
Length = 646
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 289/532 (54%), Gaps = 23/532 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T+ + G +A++T+ NPPVNAL+ + GL D + + V A+VL G F G
Sbjct: 1 MTVTIARQGEIAVVTVDNPPVNALSAALRQGLWDAADTLDADASVAAVVLVCAGRTFIAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
D+ F K P V L +V IE +KP AA+ G ALGGGLE+A+GC
Sbjct: 61 ADVTEFGK----------PPVPPHLPDLVARIEGAQKPWTAAIHGSALGGGLEVALGCRF 110
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
R+A P LGLPE++LG++PG GGT R PR+VG+ A++++ + + + + + GL+DA
Sbjct: 111 RVAVPDASLGLPEVSLGIVPGAGGTVRTPRVVGVPAAVDLVTSGRPMRAAKAAEAGLVDA 170
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
V+ + LL+ + +A R P S + A + +A++ AP
Sbjct: 171 VIQGD-LLEGAVTFARQALTRPLPEPASSRPVAAPEAEFWAEQEKAVAKVAKGAAAPL-- 227
Query: 243 QHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
+ ACL E G++ + E + F EL D + L HVFFA+RA + + D+
Sbjct: 228 RALACLRKAAEA----GFAEAMAFERETFLELRGSDQAAALRHVFFAERAAPRPAALRDV 283
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+P +R+ AVIGGG MG+GIA A + VVL E + E + +G+ + G V R
Sbjct: 284 --EPLPLRRAAVIGGGTMGAGIAAALRDAGLPVVLVERDDEAVARGMANLRGIFDGAVRR 341
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
GKLT+ +A L + G DY+ D D+VIEAV E + +K+ +F +L +AC P +LAT
Sbjct: 342 GKLTEAQAAARLAGVAGTTDYAALADADLVIEAVFEEIGVKRAVFEQLARACGPDAVLAT 401
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D + E + R IG HFFSPA+VM LLEIV TS + + + + +KK
Sbjct: 402 NTSYLDPRAIAEGLPNPGRFIGLHFFSPANVMKLLEIVPVPETSDRTLATGFALARALKK 461
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+PV G C GF NR Y +A LV GV + ID+A+R G +GPF+
Sbjct: 462 IPVRAGICEGFIGNRILKRYRAAAEALVRKGVPIAEIDAAMRGHGFAMGPFE 513
>gi|395005834|ref|ZP_10389697.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316158|gb|EJE52894.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 707
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 279/526 (53%), Gaps = 18/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GV ++++ NPPVNAL + GL A + ++A+++ G G F G DI F
Sbjct: 15 QEGVLLVSVDNPPVNALGAAVRQGLLAAIAAAEADAGIRAVLIVGAGRAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE C KP+VAA+ G ALGGGLE+A+ H R+A P
Sbjct: 75 K----------PPVPPALPEVCQAIEACSKPVVAAIHGAALGGGLEVALSAHYRLALPGA 124
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
QLGLPE+ LG++PG GGTQR PRL+G+ A E+ML K + ++ GL+DAV +
Sbjct: 125 QLGLPEVLLGLLPGSGGTQRAPRLMGVKAATELMLSGKHLNTQAALAAGLVDAVAEGSDP 184
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ ++ AR+ P + +L + A+ L + R K A + +D
Sbjct: 185 VAAGLAHVRELLARQAPVRPTSALPGRLADKAAAQAELDVLRADTAKAARGLFSPLKIID 244
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRG 307
++ + G+ E F L LD+ + GL+H FFA+R +KVP PR
Sbjct: 245 CVQAALDLPFDQGMQFERAQF--LACLDSPQRAGLIHAFFAEREVAKVPEAK--AAAPRP 300
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ +AVIGGG MG+GI + + + V + E + + +G +E LV +G+++ +
Sbjct: 301 ITAIAVIGGGTMGAGITVSALDAGLPVTMIERDEASIARGRAHVEKVYDALVAKGRMSAE 360
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
L G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D
Sbjct: 361 AKAATLARYTGSTRYEDIASADLVIEAVFEDIEVKKTVFRELDRVCKPGAVLATNTSYLD 420
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T+ +IG HFFSPA++M LLEIV R SA V+ + K +KKVPV G
Sbjct: 421 IDAIAAATARPQDVIGLHFFSPANIMKLLEIVVPVRVSADVVATAFELAKRLKKVPVRAG 480
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y Q+A L+ G + ID+A R FG P+GPFQ
Sbjct: 481 VCDGFIGNRILAVYKQAADYLMEDGASPYEIDAAARGFGYPMGPFQ 526
>gi|94313504|ref|YP_586713.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
gi|93357356|gb|ABF11444.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
Length = 696
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 282/522 (54%), Gaps = 13/522 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ PVN L + + D + A + V+AIVLTG FS G DI F
Sbjct: 13 VAVLSMNKGPVNGLGAALRTAIADAVDRANADPAVQAIVLTGTPRAFSAGADITEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + S P++ V V++ IE KP+VAA+ G LGGGLELA+GCH R+A P QLG P
Sbjct: 69 GTPNASREPNLRV--VIDQIEGGAKPVVAAIAGQCLGGGLELALGCHFRVALPDAQLGFP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ +G++PG GGTQR+PRL+GL A+ M+ L ++ LID V + +
Sbjct: 127 EVKIGLLPGGGGTQRMPRLIGLEPAVNMVTLGNPAPAKSFAGTPLIDRVADGDVVAAAVA 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
IAA+ P RT L S + L+ AR + A L+ +
Sbjct: 187 FAQELIAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAA 241
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ G+ E + F L+ SR L H+F A+ A SK+ ++ G R +RKV V
Sbjct: 242 SLTKSFDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGV 300
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++ +
Sbjct: 301 IGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQVEQRM 360
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G L Y++ DVD+VIEAV E++ +K+ +F L+K C ILA+NTS ++L+ +
Sbjct: 361 GLITGTLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIAS 420
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T +IG HFFSPA+VM LLEIVR +T+ V+ M + K IKK+ VV G C GF
Sbjct: 421 FTKRPTDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFI 480
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y +A L++ G +ID A++ FG+ +GP++ G
Sbjct: 481 GNRMLARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMG 522
>gi|66519936|ref|XP_393806.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Apis mellifera]
Length = 764
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 282/545 (51%), Gaps = 34/545 (6%)
Query: 13 DGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++TL +P V N L ++ + D + V +I+ ++G G F G DIN+
Sbjct: 48 DNVAVLTLDSPGVKMNILNSEVMYEIDDVLKNIEQNSAVNSIIFISGKPGCFIAGADINM 107
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ D + + IE KKPIVAA++G LGGGLELAM CH RIA
Sbjct: 108 IRSFKTPED-GYKVAFEAQKIFEKIEKSKKPIVAAIQGSCLGGGLELAMACHYRIAVNDQ 166
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV--- 184
KT LGLPE+ LG++PG GGTQRLP+LV LS ++ M+L K + + + K+GL+D +V
Sbjct: 167 KTSLGLPEVMLGILPGAGGTQRLPQLVSLSNSLNMILTGKQVKAIKAKKIGLVDLLVNCL 226
Query: 185 -----TSEE-LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA------------REV 226
TSEE ++ A+ +A ++R K +LS+ +V
Sbjct: 227 GCGIGTSEENTMRYLEETAIKVAQDITNKTLKINRDSK--TLSDKFMNYVLHFDFVKDQV 284
Query: 227 LKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 285
LA+ + K KT P LDV+ + G EAK F EL + +GL ++
Sbjct: 285 FNLAKEKVKQKTGSLYPAPFKILDVMRISLNKESKLGYEAEAKAFGELGVTPQCKGLTNL 344
Query: 286 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 345
FF Q K G+ V+K+AV+G GLMG+GI I + V++K+ N L
Sbjct: 345 FFGQTTCKK----NRFGVPKNAVKKIAVVGAGLMGAGIVQVSIDKDFDVIMKDTNETALY 400
Query: 346 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 405
+G+ ++ + V + K + + + L LDYS FK+ D+VIEAV E + +K K+
Sbjct: 401 RGVNQVQKGMHAAVKKKKYSNFQKDRYFSKLDSTLDYSSFKNADIVIEAVFEDITIKHKV 460
Query: 406 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465
E+E+ P +C+LATNTS I +N + ++ D+IIG H+FSP H M LLEI+ + TS
Sbjct: 461 IKEIEENTPNYCVLATNTSAISINEIAAGSNRPDKIIGMHYFSPVHKMQLLEIITHKGTS 520
Query: 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 525
+ I + VG K ++VG+ GF R A L+ GVD +D+ + F
Sbjct: 521 TETIKTAVDVGLKQGKTIIIVGDGPGFYTTRILSALLSEAIRLMQEGVDPIYLDNLTKKF 580
Query: 526 GLPIG 530
G P+G
Sbjct: 581 GFPVG 585
>gi|323454080|gb|EGB09950.1| hypothetical protein AURANDRAFT_22720 [Aureococcus anophagefferens]
Length = 695
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 280/527 (53%), Gaps = 33/527 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+GVA++ + +PPVNAL + AGL E A + D +V+ G+G F G DI F
Sbjct: 10 NGVAVLHVTSPPVNALGAAVRAGLVSSMERALA-DSATGLVVVGDGLTFPAGADITEF-- 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + P S V+ ED P AA+ G ALGGG ELAM CH R+ A ++G
Sbjct: 67 ----GKPPMEP--SFGEVMRAFEDADIPTAAAIHGTALGGGFELAMSCHYRVMASCARVG 120
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPRLVG A E+M+ + ++++E LG +DAVV +L
Sbjct: 121 LPEVHLGILPGAGGTQRLPRLVGADAAAEIMVTGRQVSAKEALALGAVDAVVAKADL--- 177
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+ A + + RT K + ++ +A+L+A+ T N P+ + + +E
Sbjct: 178 ------EAEAVKVVEASPVRRT-KAVLVDGFKDADSIAKLKARATL-NAPK--SIIQCVE 227
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG---VR 309
+ + G+ E F+EL + L H+FFA+RA SKVP G+ P V+
Sbjct: 228 AAVCNDMQDGLAFEEARFRELQGSTQANALQHLFFAERACSKVP-----GVSPEDAVDVQ 282
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR--GLVTRGKLTQD 367
V+GGG MG GIA + N + V + E +++ I +E R RG+LT++
Sbjct: 283 AAGVVGGGTMGRGIAMCFVDNGLPVTILETSADAAAAAISGVEETYRRSSAFKRGRLTEE 342
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
L +L D KD D+V+EAV E + +K+ IF++L++ P C+LA+NTST+
Sbjct: 343 ALTAKLNLLSSASDVDALKDCDLVVEAVFEDMAVKRSIFADLDRVTKPSCVLASNTSTLS 402
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + + R++G HFFSPA+VM LLE VR RT + M +GK ++K V+ G
Sbjct: 403 IDGIAGAVADPARVVGMHFFSPANVMRLLENVRGARTGPAAVATAMAMGKRLRKTTVLAG 462
Query: 488 NCTGFAVNRAFFPYSQSA-RLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ GF NR PY + LL +D+A+ +G+ +G FQ
Sbjct: 463 DDFGFIGNRMLEPYGRECLALLRHANCGPELVDAALLEYGMAMGFFQ 509
>gi|390168303|ref|ZP_10220267.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589183|gb|EIM67214.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 654
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 283/529 (53%), Gaps = 22/529 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+G+ + PPVNAL + L D EA + V+A+V+ G F G DI F
Sbjct: 13 REGIGECVVDAPPVNALGRDVRQALLDAVAEAAADPVVEALVIRCAGRTFFAGADIREF- 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ V+ IED KPI+AA+ G ALGGGLE+A+G H RIA +
Sbjct: 72 -----GKPPLPP--SLPEVIAAIEDSAKPIIAAIHGTALGGGLEVALGAHRRIAVSSARF 124
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRLVG+ KA+ M++ I++EE + GL+D V L++
Sbjct: 125 GLPEVKLGLLPGAGGTQRLPRLVGVGKALAMIVGGDPISAEEALEAGLLDRKVADGTLIE 184
Query: 192 VSRLWALDIAARRKPWIRS----LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+R +A + A P +R+ + D++ ++ + R + AP AC
Sbjct: 185 AARQFAREAAGEGAP-VRTRDLPVADPDRVDTVLDEYGNANPRRFGGQD-AP-----AAC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPR 306
++VI +G+ + E F L S L HVFFA+R SKV + D P
Sbjct: 238 VEVIRKGLRVPFDEALALERAAFTRLRDGAQSAALRHVFFAEREVSKVAGIDADTPRLP- 296
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ + VIG G MG GIA A + + VVL E E L G+ + + V G++ +
Sbjct: 297 -IDRAGVIGAGTMGRGIAMALLAAGLPVVLVEQRREALDAGLAAVRDLIARAVKGGRMDR 355
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
A+ A L G L Y + +VD+VIEA E++ +KQ IF L+ P ILATNTS +
Sbjct: 356 ASADAASARLTGSLSYDDLAEVDLVIEAAFETMEVKQVIFRALDGVAKPTAILATNTSYL 415
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS ++++G HFFSPA++M LLEIVR RTS QV+ + + K + K+ VV
Sbjct: 416 DVDAIAACTSRPEQVLGLHFFSPANIMKLLEIVRGARTSPQVLATALDLAKRLGKIAVVA 475
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GN GF NR +A + G + ID + +FG+P+GPF+ G
Sbjct: 476 GNAHGFIGNRMLMVRRLAAEAMALEGASPYAIDRVLVAFGMPMGPFRIG 524
>gi|88810261|ref|ZP_01125518.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
gi|88791891|gb|EAR23001.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
Length = 726
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 300/548 (54%), Gaps = 26/548 (4%)
Query: 4 PRVTMEVGNDGVAIITLINP--PVNALA---IPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
P + +E DG+A I + P N L + + L D+ E S VK I+ ++G
Sbjct: 16 PALCLERREDGIACIRIDCPGQSQNTLGRAEMNQASQLLDRLERDES---VKGIIFISGK 72
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DI++F+ A + S + + + + I + P+VAA++G+ GGGLELA
Sbjct: 73 AGSFVAGVDIHLFEAFKSAAEASALSAEG-QAIFDRIAAFRVPVVAAIDGVCFGGGLELA 131
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CHAR+ + +T+LGLPE+ LG++PG GGTQRLPRL+GL A+++ML K + + +
Sbjct: 132 LACHARVCTGSEQTRLGLPEVQLGLLPGGGGTQRLPRLIGLPAALDLMLTGKRLRATQAQ 191
Query: 176 KLGLIDAVVTSEELLKVSRLWA----LDIAARRKPWIRSLH----RTDKLGSLSEAREVL 227
+LGL+D V + LL + W R W+++L R + LG V
Sbjct: 192 RLGLVDDRVPTSILLDTALQWVEVCQRGRVRRGGGWLQALTAWALRGNPLGRAM----VF 247
Query: 228 KLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
K AR Q A +T N P ++ +E G+ G G+ EA+ F EL M +R L++++
Sbjct: 248 KQARKQVAARTQGNYPAPTRLIECVERGLSEGIEPGLKAEAQAFGELAMTPQARQLINLY 307
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLL 345
FA A K V D ++PR VR+V V+G GLMG+GI+ + V LK+V + L
Sbjct: 308 FATSAMKKDTGVADPDVEPRAVRRVGVLGAGLMGAGISFVTAARAKVPVRLKDVEPKGLA 367
Query: 346 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 405
G+K I+ + ++R +++ +A A + LD+S + +D+VIEAV E + LK ++
Sbjct: 368 SGLKYIDERIDQRLSRHAISRFEAERARCRVTPTLDFSGCRSLDLVIEAVFEDLELKHRM 427
Query: 406 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465
E+E C I A+NTS++ L + + +IG H+FSP MPLLE++ ERT+
Sbjct: 428 IREVEANCNADVIFASNTSSLPLARIAQAAERPQNVIGLHYFSPVDRMPLLEVIAHERTA 487
Query: 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 525
+VI M G+ K P+VV + GF VNR PY A L+ GV + RID A+ F
Sbjct: 488 PEVIATAMAFGRAQGKTPIVVRDGVGFYVNRILAPYLNEAVHLLEEGVAIDRIDQALVRF 547
Query: 526 GLPIGPFQ 533
G P+GPF+
Sbjct: 548 GFPVGPFK 555
>gi|398812807|ref|ZP_10571521.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398076521|gb|EJL67581.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 700
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 285/521 (54%), Gaps = 19/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN + + GL E A + D+ A++L G G +F GG DI F
Sbjct: 14 VAVLTLDNPPVNGIGNTVRQGLYAGIERAMADTDIDAVLLIGAGRQFCGGADIRQF-NTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LI KP++AA+ G+ALGGGLELA+GCH R+A+ +LGLP
Sbjct: 73 AATQKPLTRDV-----LTLIARSTKPVIAAIHGVALGGGLELALGCHYRVASADAKLGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG GGTQRLPRLVG++ A++++L I + +LGL++AV+ E LL +R
Sbjct: 128 EVNLGLIPGGGGTQRLPRLVGVNAALDIILSGAPIKAPRAHELGLVNAVIMGE-LLAGAR 186
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + A R + + A + TA +A +D ++
Sbjct: 187 AFARRVVAEGAALPLVAQRALEPAGVDFAERRRAVPARARNATA-----QRAAVDAVQAS 241
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP---RGVRKV 311
G+ +E +F ELV S+ L H+FFA+R K+ L P R VRKV
Sbjct: 242 TQLALEDGLTRERALFDELVAGPESKALRHLFFAEREAPKLSET----LAPTELRVVRKV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AV+G G MG GIA A I VVL E + +G+ + N V +GKL++
Sbjct: 298 AVLGAGTMGGGIAMAFANAGIPVVLLEREQAAIDRGLDLVRRNYGVTVAKGKLSEAAMAG 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ +++ LD++ DVD+VIEAV E + +K+++F +L+ C P ILATNTS + ++ +
Sbjct: 358 RMALIEPALDFAALHDVDLVIEAVFEDMAVKKEVFEQLDAHCKPGAILATNTSRLSIDEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
TS +IG HFFSPA+VM LLE+VR E T VI M + + I K+PV+V C G
Sbjct: 418 ARSTSRPQDVIGLHFFSPANVMRLLEVVRGEGTLPAVIAACMKMAQDIGKIPVLVRVCEG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR Y + A L+ G ++D A+ FG+ +GP
Sbjct: 478 FVGNRMLTGYWREAGFLLEEGASPQQVDRAMTGFGMAMGPL 518
>gi|311106832|ref|YP_003979685.1| enoyl-CoA hydratase [Achromobacter xylosoxidans A8]
gi|310761521|gb|ADP16970.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Achromobacter xylosoxidans A8]
Length = 706
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 281/529 (53%), Gaps = 27/529 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + ++T+ +PPVNAL+ + A L +A + V+AI+L G G F G DI F K
Sbjct: 16 DDILVVTIDHPPVNALSAAVRADLAAAIRDAQADPQVRAILLLGAGKNFIAGADIREFGK 75
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P + E V N IE KP+VAA+ G ALGGGLE+A+ H R+A +LG
Sbjct: 76 -------PPQPPILPE-VCNQIEASAKPVVAALHGAALGGGLEVALAAHYRVALAGARLG 127
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE---- 188
LPE+ LG++PG GGTQR PRL+G A+++ML K +T+ + GL+DA+ +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGAQAALDLMLSGKHLTAGSAREAGLVDALSDEADPLDA 187
Query: 189 -LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQH 244
L +L AL RR T G+L + A + A + +T +
Sbjct: 188 GLAYTRQLLALGAGPRR---------TRDAGALEDRVAALAQVDAAAERVARTTRGLYSP 238
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
++ + I G+ E +F + + GLVH FFA+R T+K+P +
Sbjct: 239 AKIVEAVRAAIEQPFEEGLRTERALFLQCLDSPQRAGLVHAFFAERDTAKMPGQEPA--R 296
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + ++ ++GGG MG+GIA + + V + E + L +G + LV +G++
Sbjct: 297 PRRLERIGIVGGGTMGAGIAVSALDAGFPVTMVEQDEAALERGRGRVAQVYELLVKKGRI 356
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
D+ + + G Y D D++IEAV E + +KQ +F++L++ P +LATNTS
Sbjct: 357 GADERDARMARYTGSTRYEALDDADLIIEAVFEDMAVKQTVFAQLDRVAKPGAVLATNTS 416
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D+N++ T ++G HFFSPA++M LLE+V + T+ + + + ++K+PV
Sbjct: 417 YLDVNLIAAATRGPADVLGLHFFSPANIMKLLEVVVGDHTAPDTVATGFELARRLRKIPV 476
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR + Q+A +++ G + ID+A+R+FG P+GP+Q
Sbjct: 477 RAGVCDGFIGNRILAVHRQAADMMMEDGASPYEIDAAVRAFGYPMGPYQ 525
>gi|420242990|ref|ZP_14746965.1| 3-hydroxyacyl-CoA dehydrogenase [Rhizobium sp. CF080]
gi|398064263|gb|EJL55952.1| 3-hydroxyacyl-CoA dehydrogenase [Rhizobium sp. CF080]
Length = 653
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 278/536 (51%), Gaps = 48/536 (8%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GV ++T+ N PVNA ++ + GL+ A + DV +V+TG G F GG DI F
Sbjct: 16 RNGVLVVTIDNAPVNATSVDVRGGLEKALAHAETAGDVAGVVITGAGKTFIGGADIKEFG 75
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV + IE KP++AA+ G ALGGGLE+A+ CH RIA+P Q+
Sbjct: 76 K---PAMEPTLPDV-----IEKIEGLSKPVLAALNGAALGGGLEVALACHHRIASPAAQV 127
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRL+G+ A++++ +S+ +E KLG+ID V +
Sbjct: 128 GLPEVKLGIVPGAGGTQRLPRLIGIPAALDLITSGRSVKVDEALKLGIIDEVAAGD---L 184
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLS------EAREVLKLARLQAKK--------- 236
V + A KP L RT +L + E V LAR + +K
Sbjct: 185 VEAAISAASALAGKP----LRRTGELNVAAVDPVEVEKASVKILARARGQKAPAEAVRLV 240
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T+ N P + G+ E F L + L HVFFA+R +SKV
Sbjct: 241 TSSNRPLAE----------------GLADERATFLALRDSREAAALRHVFFAERESSKVE 284
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ G++PR V+ + + G GLMGSGIA A + V+ + E KG I +
Sbjct: 285 ELE--GVEPRSVKTIGICGLGLMGSGIAVAALGAGYSVIGLDQTVEAAEKGFDRIIGLLE 342
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V G+L Q L D + D+V+EAV + + +K +F L+K P
Sbjct: 343 RNVASGRLDQADFEAQKARLSVTADDIDLAPCDLVVEAVFDDLAVKTDLFRRLDKVIRPD 402
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
+LATNTS ++ + + T++ +R++G HFFSPAHVM LLE+VR RT+ V+ + V
Sbjct: 403 AVLATNTSYLNPDEIAAATANPERVLGLHFFSPAHVMRLLEVVRCARTAPDVLATGLAVA 462
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K ++K+PVV G GF NR F Y + A L+ G ID+A+ +G P+G F
Sbjct: 463 KKLRKLPVVTGVTEGFIGNRIFSAYRREAEFLLEDGALPHEIDAALEDYGFPMGLF 518
>gi|398844584|ref|ZP_10601644.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398254406|gb|EJN39503.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 703
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 293/524 (55%), Gaps = 24/524 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L PPVNAL P+ A L + E+A + V+AIVL G G FS G DI+ F
Sbjct: 13 LALIGLARPPVNALGQPLRAALLEACEQAQADPAVRAIVLYGANGLFSAGADISEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD+ ++ + KP+VAA+ LALGGGLELA+ C RI P T++GLP
Sbjct: 69 GTQASCAAPDLPG--LLQRLTSMDKPLVAALGKLALGGGLELALACGYRIGEPGTRVGLP 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193
E+ LG++PG GGTQRLPRL+G +A++++L + SE +LG++D V ++ LL +
Sbjct: 127 EINLGLLPGAGGTQRLPRLIGARQALDLILAGTPVNSETALRLGILDRVAKHADALLDEA 186
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAK-KTAPNM---PQHQAC 247
+A ++ R + D G L + L+ + K + AP + AC
Sbjct: 187 CAFARELLGDRAAARPDVPYPDPAGGLPDDFFEHFLEANAPRWKSRLAPRLVLDALQAAC 246
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPR 306
+ EG+ H E +FK+ S L HVFFA+R +KVP + D+ L+P
Sbjct: 247 RWPLTEGLAH--------EQVLFKQAEDSRQSAALRHVFFAEREAAKVPWIEADLPLRP- 297
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ KVAVIG G MG GIA I V+L E + L +GI I N V RGKL
Sbjct: 298 -ICKVAVIGAGTMGGGIAMNFANAGIPVILLERQQDALDRGIAQINRNYANSVKRGKLAP 356
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
++ ++ G LDY++ +DVD+VIEAV E + +KQ++F L++ C P ILATNTS++
Sbjct: 357 EQLEQRTTLISGTLDYADLRDVDLVIEAVFEKLEIKQEVFRTLDEVCKPGAILATNTSSL 416
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + TS +IG HFFSPA+VM LLE+V +T+A V+ + +G+ I K+PVV
Sbjct: 417 DVDRIAAVTSRPHDVIGLHFFSPANVMRLLEVVNGRQTAADVLATTLKLGRTIGKLPVVS 476
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
G C GF NR PY++ A LV G ++D+ + L +G
Sbjct: 477 GVCFGFIGNRMLEPYAREAHRLVLEGASPAQVDNVLTGLDLNMG 520
>gi|374367960|ref|ZP_09626016.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373100473|gb|EHP41538.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 280/522 (53%), Gaps = 17/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AI+TL +PPVNAL+ + G+ D E A + +VK IVL G F G DI F K
Sbjct: 16 IAILTLNSPPVNALSAAVRTGILDGVELAIADSNVKGIVLICAGKTFIAGADITEFGK-- 73
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V IE KP+VAA+ G ALGGGLE+A+ CH R+AA + G
Sbjct: 74 --------PPVGPALADVQAAIEGSPKPVVAAIHGTALGGGLEVALVCHYRVAARSAKCG 125
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQRLPR+VG +KA++M+ I + ++GL D V L
Sbjct: 126 LPEVNLGLLPGAGGTQRLPRIVGPAKALDMVTSGAHIGAAAAAEMGLFDLVTDDAALRAD 185
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKK-TAPNMPQHQACLDV 250
+ + + A ++P + +K+ + E+ R A+K + P++ +
Sbjct: 186 AIAFVKQVNAEQRPLRKVRDLNEKVEAARGKPELFADFRRANARKFRGFDAPEYN--IRC 243
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
IE + G+ E K+F L+ S + FFA R +P+V V+K
Sbjct: 244 IEAAVNLPFDEGMKVERKLFLALMNGTQSAAQRYYFFASRQVWNLPDVP-ADTPTIDVKK 302
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V +IG G MG GIA + + VV+ E E L +G++TI AN ++G++T +
Sbjct: 303 VGIIGAGTMGGGIAMNLLNAGVPVVIVETAQEALDRGMRTIRANYDNTASKGRITAADVD 362
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ +L L+ + D D+VIEAV E++ +K+ IF +L+K ILATNTS +D+N
Sbjct: 363 KRMALLTPTLELGQLADADLVIEAVYENMDVKKDIFGKLDKIVKRGAILATNTSALDVNE 422
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS + +IG HFFSPA+VM LLE+VR ++TS VI M + + I K+ +VG C
Sbjct: 423 IAAATSRPESVIGLHFFSPANVMKLLEVVRGDKTSKPVIRTSMELARKIGKIAALVGVCP 482
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR + A+ LV G + ID + +FG P+GPF
Sbjct: 483 GFVGNRMLAQRQREAQKLVLEGALPWDIDRVLYNFGFPMGPF 524
>gi|170747490|ref|YP_001753750.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
radiotolerans JCM 2831]
gi|170654012|gb|ACB23067.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
radiotolerans JCM 2831]
Length = 680
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 293/523 (56%), Gaps = 17/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVNAL + A L + + + V+A+VL G F GG DI F +
Sbjct: 1 MAVLTLANPPVNALGAALRAALDEALTQVIADVSVRAVVLAAEGKVFVGGADIGEFGRPQ 60
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ ++ ++ KP+VAA+ G ALGGGLELAM CH R+AAP ++GLP
Sbjct: 61 ---RPPSLPDI-----LDRLDASPKPVVAAIGGAALGGGLELAMACHGRVAAPSARIGLP 112
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG GGTQRLPRL+G A MML + +++E+ LG++DAVV + L+ +R
Sbjct: 113 EIKLGIIPGAGGTQRLPRLIGPDTAFPMMLTGEPVSAEKAAALGIVDAVVLGD-LVAEAR 171
Query: 195 LWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
AL++A A P +R R+DKL EARE + +A K P+ A +
Sbjct: 172 TRALELADAGTLPRVRD--RSDKL--TPEARERFEAQATEAVKRDPDATNVHALARAVRA 227
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 312
G+ + V E F+ LV S+ L + FFA+R ++VP + D +P +R A
Sbjct: 228 GLEQDFDAAVAVERAEFRALVEDPRSKALRYAFFAEREAARVPGLPKDTPRRP--IRTAA 285
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
VIG G MG GIA I V + E L +G+ ++A G RG +T+ +
Sbjct: 286 VIGAGTMGGGIAMCFANAGIPVTVIETEEGALTRGLDRVKALYAGSAKRGSITEAQREER 345
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + G + ++ D+V+EA E + +K+ IFSEL++ P ILATNTS +D+N +
Sbjct: 346 VGRITGAIGLEHAREADIVVEAAFEDMGVKRGIFSELDQIAKPGAILATNTSYLDVNAIA 405
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T+ ++G HFFSPA+VM L+E+VR E+T+ +V+ + +GK + K+PV VG C GF
Sbjct: 406 AVTNRPQDVLGLHFFSPANVMRLVEVVRAEKTAPEVLATALDLGKRLNKLPVAVGVCFGF 465
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR S++ L+ G +D+A+ FG +GPF G
Sbjct: 466 VGNRMLERRSRAGERLLLEGALPHEVDAAVTGFGFRMGPFAMG 508
>gi|432340031|ref|ZP_19589553.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
wratislaviensis IFP 2016]
gi|430774912|gb|ELB90476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
wratislaviensis IFP 2016]
Length = 687
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 275/521 (52%), Gaps = 22/521 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + D+V AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDEVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG+IPG GGTQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAQ 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
R A R K +R+L ++ EV ++A ++ A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRAA--RPQTVAAVGAI 241
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG+GIA A + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGFPVVLVDQQRQAAAAAAERLQRTYQGMVTRGRLTESDAQH 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L +L + ++ D+V+EAV E + +KQ + +LE PH LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVVEAVYEDLEVKQTVLRQLETVLRPHVPLATNTSYLDVNEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + Y + L++ G ++D+A+ FG +GP
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPL 518
>gi|444705482|gb|ELW46908.1| Peroxisomal bifunctional enzyme [Tupaia chinensis]
Length = 724
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 281/527 (53%), Gaps = 18/527 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A+I L NPPVNAL++ ++ LK++ ++A + VKAIV+ G G+FS G +I+ F+
Sbjct: 8 HDCLALIRLRNPPVNALSLAVLQQLKERLQQAVTDRAVKAIVICGADGKFSAGANIHDFK 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + + L V+ ++ +K +VAA++G+A GGGLELA+GCH RIA K ++
Sbjct: 68 --------TPRTNDTFGLFVDELQRTEKLVVAAIQGMAFGGGLELALGCHYRIAHAKARV 119
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+++G++PG GTQ LPRL G+ A++++ + + + E KLG++D VV S+ + +
Sbjct: 120 GFPEVSIGLLPGARGTQLLPRLTGVPAALDLITSGRHVLAGEALKLGILDQVVNSDPVEE 179
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
R +A +A +P + S + A L+ +K P +AC+ I
Sbjct: 180 AVR-FAQRVAG--QPLESRRLYNKPVPSCPNMDAIFSDAILKMRKQHPGCLAQEACVRAI 236
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGV 308
+ + + G KE ++F L +R L + FFA+R+ +K K + +
Sbjct: 237 QATVQYPYEVGSKKERELFVYLRKSGQARALQYAFFAERSANKWSTPCGASWKTASAQPI 296
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
V V+G G MG GIA I VV E N E L K I +++ +R + Q
Sbjct: 297 SSVGVLGLGTMGRGIAICFAKAKIPVVAVESNKEQLETANKIITSSLEKEASR--MRQSG 354
Query: 369 ANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ K L S E VD+VIEAV E + LK+++F+EL C P L TNTS +
Sbjct: 355 HPDPWSGPKPRLTSSMKELSGVDLVIEAVFEEMNLKKQVFAELSAVCKPEAFLCTNTSAL 414
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + T +IG HFF+PAHV+ LLE++ TS I +M + K I KV VVV
Sbjct: 415 DIDEIASSTGRPHLVIGTHFFAPAHVLRLLEVIPGRHTSPSTIATVMNLSKKIGKVGVVV 474
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GNC GF NR YS L+ G ID + FG +GPF+
Sbjct: 475 GNCFGFVGNRMLNHYSNQLYFLLEEGSKPEEIDQVLEEFGFKMGPFR 521
>gi|209519293|ref|ZP_03268093.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209500242|gb|EEA00298.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 700
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 279/532 (52%), Gaps = 17/532 (3%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P V+ N G+A+ T+ NPP+NAL+I + GL D E A + DDV+ +V+ G F
Sbjct: 4 PYVSYSKSN-GIAVATIDNPPINALSIGVRRGLMDAIERAQAEDDVQVLVIACAGRTFVA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI+ F + + + S+ +++ + KP +AA+ G ALGGGLELA+ C R
Sbjct: 63 GADISEFGQPY--------EEPSLYKILDALGTSSKPSIAAIHGTALGGGLELALSCTWR 114
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+A Q+G PE+ LG++PG GTQ RL G A+++ +++E+ + G+ID +
Sbjct: 115 LAQVTAQIGQPEVKLGLMPGGYGTQWWLRLAGPQVALDVSTSGNPVSAEQAHEWGVIDYL 174
Query: 184 VTSEE--LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR-EVLKLARLQAKKTAPN 240
VT + L+ +R +A D+ + + RT G L + + + R + ++
Sbjct: 175 VTDRDVDLVSAARAFAQDLNCKG---TLARDRTAIKGPLKDVDLSMFETYRQKNQRKWHG 231
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ Q +DV+E G E K F+E S L H+FFA+R KV
Sbjct: 232 LVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPESASLRHLFFAEREAGKVRGADK 291
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
P ++ V VIG G MG GIA A + VVL + E L + I I+AN V
Sbjct: 292 A--TPLDIKSVTVIGAGTMGQGIAQACASAGLSVVLVDRTYEALERAIVAIQANYETSVA 349
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG + + KA+ A ++ D D++IEAV E + +KQ +F +L+ P ILA
Sbjct: 350 RGSMARAKADRAFNLISISCDLVAVSTCDLIIEAVFEDLGVKQSVFRDLDAVAKPEAILA 409
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTST+D++++ T +++G HFFSPAHVM L+E+++ +TS +V ++ + K ++
Sbjct: 410 TNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKGSQTSDEVSATILKITKALR 469
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K+ V GN GF NR Y + A L+ G ++ID + FG P+G F
Sbjct: 470 KIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRVLNQFGFPMGLF 521
>gi|119478556|ref|ZP_01618499.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119448460|gb|EAW29709.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 699
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 294/522 (56%), Gaps = 13/522 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV II L NPPVNAL+ + G+++ A D+ + +++ G F G DI F K
Sbjct: 11 GVGIIRLNNPPVNALSQVLREGIQNAVVAAQG-DESQVLLIVCEGRTFVAGADITEFGKP 69
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
A S+ +++ IE+ KP++AA+ G ALGGG E+A+ H R A ++GL
Sbjct: 70 AKAP--------SLPSILDSIENSVKPVIAAIHGTALGGGFEIALAAHYRCALASAKVGL 121
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG+IPG GGTQR PR++G+ A++M+ + + + +GL+D ++ + LL+ +
Sbjct: 122 PEVKLGIIPGAGGTQRTPRIIGVDAALDMITSGNPVAAAKAHSMGLVDHIINGD-LLEGA 180
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+A + A P R T + ++A + R + K + Q +D ++
Sbjct: 181 MSYAERLIADNAPCKRVSDMTIDPATATDA--LFDSWRKKMAKKSRGQLAPQKIIDAVQI 238
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ G++KE ++F E V S + H+FFA+RA +KV ++ + R + KV +
Sbjct: 239 AVTSSVPEGMVKERELFTECVQSTQSSAMRHIFFAERAAAKVNDLAKDTVD-RTISKVGI 297
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+GGG MG GIA I VV+ E+N + L +G+ + N V++GKL++++ + L
Sbjct: 298 LGGGTMGGGIAMNFANVGIPVVMIEINDDALARGLDIVRKNYSITVSKGKLSEEQMKDCL 357
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
++ G +Y + DVD+VIEAV E + +K+++F++L+KAC ILATNTS D++ +
Sbjct: 358 SLISGSTNYDDLGDVDLVIEAVFEDLDVKKEVFAKLDKACKQGAILATNTSYQDVDKIAA 417
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
T+ D +IG HFFSPA+VM LLE+VR E+T+ VI M + K I K+PV+ G C GF
Sbjct: 418 ATTRPDDVIGMHFFSPANVMKLLEVVRGEKTAGDVISTTMKLAKKINKIPVLSGVCYGFI 477
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR + +L + G ++D+ ++ +G+ +GP G
Sbjct: 478 GNRMLRCSVRENQLCMMEGASPEQVDAVMQGWGMAMGPLAVG 519
>gi|103488544|ref|YP_618105.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
gi|98978621|gb|ABF54772.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingopyxis alaskensis RB2256]
Length = 677
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 280/538 (52%), Gaps = 37/538 (6%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
VTME DG +A+I + NPPVNAL+ + GL D F+ A + D VKAIVL G F G
Sbjct: 9 VTME--KDGEIAVIIVNNPPVNALSWHVRQGLADHFKAALADDSVKAIVLRCAGATFIAG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F G PD + V+N IE KP+VAA+ G ALGGGLE A+ CH RI
Sbjct: 67 ADISEF------GKPPRGPDFNA--VLNSIEVASKPVVAAIHGTALGGGLETALVCHYRI 118
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P +LG+PE+ LG++PG GGTQRLPR+VG+ A M + + + ++GL+D +
Sbjct: 119 AVPSAKLGVPEVKLGLLPGAGGTQRLPRIVGVEAAATMTSTGDPVPAPKAKEMGLVDELA 178
Query: 185 TSEELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEARE---VLKLARLQAK 235
+ L + +A A R +P + ++L + + R A L
Sbjct: 179 GEDSLAADAIAFARAKIADGPRPTRERPVFGDVAVIERLKAANAKRWRGFEAPYANLACV 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
+ A +P +EG+ E + F +L+ S H+FFA+R +K+
Sbjct: 239 EAATRLP--------FDEGLAF--------EREQFMKLMFGSQSAAQRHIFFAERQAAKI 282
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ K R V+KV +IG G MG GI + I + E+ + L +G+ + N
Sbjct: 283 DGLPK-DTKLRDVKKVGIIGAGTMGGGIMMNFLQKGIPCTIVEMAQDALDRGLGVVRKNY 341
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
+G+ T ++ + + ++ L + D D++IEAV E++ +K+ IF +L+ P
Sbjct: 342 DASAAKGRFTPEQVDQMMGLITPSLSLDDLADCDLIIEAVYENMDVKKDIFGKLDTIAKP 401
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
ILA+NTS +D++ + T+ ++G HFFSPA+VM LLE+VR E+T+ + M
Sbjct: 402 GAILASNTSYLDIDEIATATNRPGDVLGMHFFSPANVMKLLEVVRGEKTAPDALATAMAT 461
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GK I KV VV G C GF NR P A L+ G ++D FG+P+GPFQ
Sbjct: 462 GKKIGKVAVVAGVCDGFIGNRMLKPRQMEAMKLLLEGATPAQVDKVHVDFGMPMGPFQ 519
>gi|414176191|ref|ZP_11430420.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
gi|410886344|gb|EKS34156.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
Length = 696
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 286/525 (54%), Gaps = 12/525 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D VAI+ + +PPVNAL+ + G+ D + A + VKAIV+ G F G DI F
Sbjct: 10 RDAVAIVIVNSPPVNALSAAVRKGIADGVKSAEADASVKAIVIACAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + S+ V+ +IE+ KP+VAA+ G ALGGGLELA+G H R+A +L
Sbjct: 70 KPPQS--------PSLHEVIEVIENSSKPVVAAIHGTALGGGLELALGAHFRVATKDAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ I + + K GLID VV E +
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAADALKNGLIDEVVEGEPAVG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+A + A ++P +R L D KL + + + A A K + A +
Sbjct: 182 -GEAFARKVLAEKRP-LRKLRDDDSKLAAAKADKSIFTNAAAAANKRNRGLEAPLAAAEA 239
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ + + E +F +L+ D S+ + FFA+R +KV V + G KPR V++
Sbjct: 240 VSHSLDQPFDQALKSERDLFIKLMNGDQSKAQRYAFFAEREAAKVSGVPE-GTKPRDVKQ 298
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 VAIIGAGTMGGGIAMSFANAGIPVTLIETGGEQLKRGLGVMQKNYEATAARGGIPADAPA 358
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ ++KGV+ KD D++IEAV E++ +K+ +F +L++ P +LATNTS +D+N
Sbjct: 359 KRMGLIKGVVGIENVKDADLIIEAVFETMAIKKDVFGKLDQFAKPGAVLATNTSYLDINQ 418
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T ++G HFFSPA+VM L EIVR E+T+ ++ + V K I KVPVVVG C
Sbjct: 419 IAAMTKRPQDVLGMHFFSPANVMKLCEIVRGEKTAPDALMTAVAVAKRIAKVPVVVGVCD 478
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + A + G ++D+ + FG+P+GPF G
Sbjct: 479 GFVGNRMLAARGKQAEKFLFEGALPQQVDAVLTKFGMPMGPFAMG 523
>gi|262195563|ref|YP_003266772.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262078910|gb|ACY14879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 686
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 289/530 (54%), Gaps = 13/530 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+T E D + +IT NPPVNAL+ + GL FE A + D + A+VL G F G
Sbjct: 4 ITTERRGD-ILVITSDNPPVNALSAAVRQGLAAAFEAAEADDAIAALVLCCRGRTFFAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F G +MP + V+ E KPIVAA+ G ALGGG ELA+GCH R+A
Sbjct: 63 DITEF------GKPPVMPLLPS--VIERAEALGKPIVAAIHGTALGGGCELALGCHYRVA 114
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
P ++G PE+ LG++PG GGTQRLPRLVG++ A+EM + I++ + GLID VV
Sbjct: 115 VPTAKIGTPEVKLGLLPGAGGTQRLPRLVGVALALEMCARGEPISAARAHQAGLIDRVVD 174
Query: 186 S--EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ E+ L + + A +P R R + S + A E + R ++
Sbjct: 175 TDDEDGLLEQAIAFAEEIAAVRPIPRVGERELAIDSEALA-ETVAAFRAANERRFRGFDA 233
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+A + +E G+ E + F +L + S + H+FFA+R +K+ ++ G+
Sbjct: 234 PEANIRCVERAAQVPLAEGLQYEREEFSKLSEGEQSAAMRHLFFAERKAAKIDDLP-AGI 292
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+ R + +V +IG G MG GIA + + V L E + E L +G+ I N + +G+
Sbjct: 293 ETRAIARVGIIGAGTMGGGIAMNFVQAGVPVTLVETSQEALDRGLGVIAKNYQRSAAKGR 352
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
T + + L +L G L E + D++IEAV E + +K +IF++L++ P ILATNT
Sbjct: 353 FTPAQVESWLGLLTGTLAIEELAECDLIIEAVFEDMAVKTQIFAKLDEIAKPGAILATNT 412
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + S ++G HFFSPA+VM LLE+VR RT+ V+ +M + K I+KV
Sbjct: 413 SYLDIDEIAASISRPGDVLGTHFFSPANVMKLLELVRGARTAPDVLATVMALAKKIRKVA 472
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV G C GF NR P + A L+ G ++D+ +FG+P+GPFQ
Sbjct: 473 VVSGVCHGFIGNRMLEPRQREASKLLLEGATPEQVDAVHVAFGMPMGPFQ 522
>gi|297172764|gb|ADI23729.1| 3-hydroxyacyl-CoA dehydrogenase [uncultured Rhodospirillales
bacterium HF4000_38H21]
Length = 651
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 289/527 (54%), Gaps = 16/527 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V + ND +A IT+ NPP+NA + + G+ D +E +K ++L G F G
Sbjct: 4 VNLTTEND-IAFITIDNPPINATSHSVRQGIVDALDEIEGDSSIKVVILICAGKTFIAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
D++ F + ++PDV + +E KP++AA+ G ALGGGLE+A+GCH RIA
Sbjct: 63 DVSEFGQ---PPKDPILPDV-----IKRLEATIKPVIAAIHGHALGGGLEIALGCHYRIA 114
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+LGLPE+ LG+IPG GGT RLPRLV + AI M+ K +++++ +GLIDA+ T
Sbjct: 115 ESGAKLGLPEVNLGLIPGAGGTVRLPRLVPVRDAIAMITGGKPVSADKANAIGLIDAI-T 173
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
L + +A I R +P L R + + + + +A + K P
Sbjct: 174 HGPLRDAALDFARTIINRPRPL--ELRRCPPVDAPDDHQWDEIIAGVGKKARGQIAPVIA 231
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
A I GI +G++ E + F EL D S+ L H+FFA+R+ +K+P + G P
Sbjct: 232 A--QAIRIGIEQDTAAGLVHEREKFVELRDSDQSKALRHIFFAERSVAKLPELD--GAAP 287
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ +V VIGGG+MG+GIATA +L + E N E G T++ ++ G + RG +T
Sbjct: 288 NPINEVGVIGGGIMGAGIATASLLAGFKATIIERNEEACTHGRATVKKHLSGSLKRGLIT 347
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QD+ N+ L L DY++ D+V+EAV E + +K +F +L K C P +LA+NTS
Sbjct: 348 QDRFNDLLASLSTSTDYADLGTADLVVEAVFEDMAVKHDVFGKLSKHCKPDAVLASNTSY 407
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D+N + + R+IG HFFSPAH+M LLE+VRT++ +A + + + K+ V
Sbjct: 408 LDINEIAANCTHPQRVIGLHFFSPAHIMKLLEVVRTDQANATSLATAFAFARKLGKIAVP 467
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR Y + ++ G +ID+A+ FG P+G F
Sbjct: 468 CGVCDGFIGNRIMSAYRKHCEYMLEDGALPHQIDAAMVEFGFPMGLF 514
>gi|390165886|ref|ZP_10218160.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
gi|389591183|gb|EIM69157.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
Length = 689
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 282/525 (53%), Gaps = 17/525 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ P+ GL+ E+A ++V AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSAPLRQGLQAGLEQAFGDEEVGAILLLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++D KP++AA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 PW---QPPSLPDLCA-----MLDDAPKPVIAAIHGTALGGGFELALTCHYRVAARSAKVG 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR+PR+VG A+E++ + I + E LGL+DAVV L +
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGTEAALEIITSGRQIKAAEALSLGLVDAVVDDAALAEE 182
Query: 193 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +A + A KP IR R D L + + ++ + A ++
Sbjct: 183 ALAFARRVVADGGAKPRIRD--RADALQADRDRPDLFTAFAAAHARRFKGFVAPAAIIEA 240
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--LKPRGV 308
+E + G+ KE +F+ LV S HVFFA+R ++VP DIG + +
Sbjct: 241 VEAAVTLPFEEGLAKETALFERLVASPESAAQRHVFFAEREAARVP---DIGPDISAIDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R V VIG G MG GI + I V L E + E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPVTLVETSQEALDRGIATIRRNYEATAAKGRMTGAQ 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ ++ LD + D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMALISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIAKAGTILASNTSFLDL 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NRIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR P A ++ G + ID + +G +G FQ
Sbjct: 478 CDGFIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQ 522
>gi|357027745|ref|ZP_09089810.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355540380|gb|EHH09591.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 659
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 268/521 (51%), Gaps = 18/521 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV ++T+ NPPVNAL+ + GL + A S + +V+TG G F G DI F
Sbjct: 15 RDGVLVVTIDNPPVNALSTEVREGLCRALDHAVSLEGAAGVVITGAGRAFVAGADIREFA 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
A ++PDV+ IE KP+VAA+ G ALGGG E+A+ CH R+A+
Sbjct: 75 TPAAA---PILPDVT-----QRIEQSDKPVVAAINGAALGGGAEIALACHGRVASMAAIF 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRLVG + A+EM+ +S+ ++E LGLIDA+
Sbjct: 127 GLPEIKLGIVPGAGGTQRLPRLVGAAHAVEMIGSGRSVKADEAQSLGLIDALGDDPVAEA 186
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
V+ + A R+ + D+ + + AR+VL AR Q A L +
Sbjct: 187 VALAHGMAKAPLRRTGELACVPADEAETEAVARKVLARARGQVAPAEAVRLVRVAALTSL 246
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E+G+ E F L D + L HVFFA+R KV + G+ PR V V
Sbjct: 247 EKGLA--------DERATFLRLRDSDEAAALRHVFFAERQAGKVAKLE--GISPRPVVTV 296
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
++G GLMGSGIA + + V+ E + KG I + G+LT D
Sbjct: 297 GIVGLGLMGSGIAVSALTAGYCVIGVEQTDDDAQKGRTCIVGLLDKAAQSGRLTPDAREA 356
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ L + + VD+ IEAV +++ +K + L+ P+ ILATNTS +D + +
Sbjct: 357 CLQRLAATANLTALSGVDLAIEAVFDNLAIKTDLLRRLDGIVRPNTILATNTSYLDPSEL 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +RI+G HFFSPA+VM L+E++ T V+ + K + K+PVV G G
Sbjct: 417 AAATVHPERIVGLHFFSPANVMRLVEVIDCAATRLDVLATALAFAKRLGKLPVVCGAAEG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR F Y + A +V G ID+A+ ++G P+G F
Sbjct: 477 FIGNRIFSAYRREAEFMVEDGAMPEEIDAALEAWGFPMGIF 517
>gi|311107837|ref|YP_003980690.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310762526|gb|ADP17975.1| fatty acid oxidation complex subunit alpha 1 [Achromobacter
xylosoxidans A8]
Length = 700
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 279/518 (53%), Gaps = 17/518 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I L NPPVN L + +G+ A + + V +IV+ G G F GG DI F
Sbjct: 24 VAVIFLDNPPVNGLGDTVRSGIHAGLALALADEGVDSIVIAGAGKAFCGGADIRQF-NTP 82
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A ++ DV + IE KP+VAA+ G ALGGGLELA+GCH R+A +++GLP
Sbjct: 83 AATAKPMLRDV-----IAAIEASAKPVVAAIHGFALGGGLELALGCHYRVAQADSKMGLP 137
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGTQRLPRL+G+S+A++M+ K + + +GL+DAV + LL +
Sbjct: 138 EVNLGLVPGGGGTQRLPRLIGVSRALDMIQSGKPMDATAAMAVGLVDAVAEGD-LLDFAL 196
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A + AA+ + + D G A AR A N +A +D +E
Sbjct: 197 SYARERAAQDSHPLAARRALDAGGVDFAA------ARAGVNPKARNAIAQRAVIDCLEAA 250
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G+ +E ++F LV D S+ L H+FFA+R + P VT G R + +V ++
Sbjct: 251 TRQPIEPGLDEERRLFDALVEGDASKALRHLFFAER---EAPRVTGGGSAGR-IGRVGIL 306
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA A+ V L E L +G+ I N +GKL +
Sbjct: 307 GAGTMGGGIAMAYANAGYDVTLYEREQAALDRGMSLIRKNYEITAAKGKLDAAGVEARMA 366
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+ LD + D+VIEAV E + +KQ +F +L+ C P ILATNTS ++++ +
Sbjct: 367 RIAPSLDMQDLAQADLVIEAVFEDMAVKQAVFRQLDAVCKPGAILATNTSRLNIDEIATC 426
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T+ + +IG HFFSPA+VM LLE+VR RT A VI M V + I K+PV+VG C GF
Sbjct: 427 TARPEAVIGLHFFSPANVMKLLEVVRGARTGADVIATCMAVAQQIGKIPVLVGVCEGFVG 486
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR Y + A L+ G +ID A+ FG+ +GP
Sbjct: 487 NRMLTGYWREAGFLLEEGASPQQIDGALTRFGMAMGPL 524
>gi|338983485|ref|ZP_08632674.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
gi|338207592|gb|EGO95540.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
Length = 698
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 201/539 (37%), Positives = 291/539 (53%), Gaps = 22/539 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A ++GLPE+ LG++PG GGTQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 181 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 299 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALARGLDRVRGTYD 342
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V RG L + M G D+ + D+VIEAV E + LK+++F+ L+ P
Sbjct: 343 VSVQRGALPAGTTEKRMAMFSGSTDWGVIAEADIVIEAVFEELGLKKEVFARLDGIARPG 402
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF G
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMG 521
>gi|196008333|ref|XP_002114032.1| hypothetical protein TRIADDRAFT_58079 [Trichoplax adhaerens]
gi|190583051|gb|EDV23122.1| hypothetical protein TRIADDRAFT_58079 [Trichoplax adhaerens]
Length = 737
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 294/549 (53%), Gaps = 33/549 (6%)
Query: 9 EVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGF 65
E+ +DGVAI+ + N N ++ ++ +K FEE VK+IVL + F G
Sbjct: 13 EINDDGVAILRMDCANSKYNLASLGLMTDIKQCFEELKENPQVKSIVLISSKVDNFISGA 72
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DIN F ++ + +V + V N IE+ KP++AA++G LGGG EL++ CH RIA
Sbjct: 73 DINTFLSINSEELTQMCRNV--QEVYNDIENMPKPVIAAIQGPCLGGGCELSLSCHYRIA 130
Query: 126 AP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ KT +GLPE+ LGV+P GGTQRLPRL+ L A++++L K + +++ KLG++DA+
Sbjct: 131 STLDKTAIGLPEVQLGVLPAAGGTQRLPRLINLPNALDLLLTGKQLKAKQAKKLGVVDAL 190
Query: 184 V-------------TSEELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEAR 224
V T + L K + A +IA R PW T L + +
Sbjct: 191 VEKIGDGVVNSAQGTLDLLEKAAVEAAKNIANGTLKINREHPWTSMKGLTYNLTTFNPYV 250
Query: 225 EVLKLARLQA---KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 281
L R + KKT P LDV++ G+ G G+L+EA F E+ +
Sbjct: 251 RNFVLNRARQTVMKKTKGLYPSPLRILDVVKTGLEKGKEEGMLQEAINFGEIGKGSVAES 310
Query: 282 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341
L+ +FF Q + P IG R V+KVAV+G GLMGSGIA + VV+K+ +
Sbjct: 311 LIGLFFGQTKCKRNP----IGEPSREVKKVAVLGAGLMGSGIAQVSVARGYDVVMKDNAA 366
Query: 342 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 401
L G + + G + ++T + N L L G LDYS+F D D+VIEAV+E + +
Sbjct: 367 AALASGQHAVYKAINGRAKKRRITNFEKNLILSRLTGQLDYSKFNDADIVIEAVLEDLDV 426
Query: 402 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 461
K ++ E+E+ P HC++A+NTS+I + + + + +++G H+FSP MPLLEI+ T
Sbjct: 427 KHQVIREVEEVVPEHCVIASNTSSIPIADIAKGSKRPSQVVGMHYFSPVDKMPLLEIIET 486
Query: 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 521
+TS + + ++VG KV +VV + GF R + +++ GVD DSA
Sbjct: 487 PQTSKEALAAAVSVGLKQGKVVIVVKDGLGFYTTRCLMALMAESLIILLEGVDPKGFDSA 546
Query: 522 IRSFGLPIG 530
++ FG P+G
Sbjct: 547 VQKFGFPVG 555
>gi|393718288|ref|ZP_10338215.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas echinoides ATCC
14820]
Length = 677
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 288/537 (53%), Gaps = 24/537 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M +P +T E+ +D + II+ NPPVNAL + GL+ E + VKA+V+ +G
Sbjct: 1 MTSP-ITTELHDDVLVIIS-NNPPVNALGAAVRQGLEAGIAEGLANPQVKAMVIRCDGRT 58
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F + M + + VV++IE KP+VAA+ G ALGGG E+ +GC
Sbjct: 59 FFAGADITEFGRP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGC 110
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H RIA P ++G PE+ LG++PG GGTQRLPR+ G+ A+E+ I ++ GLI
Sbjct: 111 HYRIAVPSAKIGTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLI 170
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK---- 236
D + + L + +A ++A KP R+ DK+ ++ V + AK+
Sbjct: 171 DRIAGEDTLAADAIAFAREVA-DAKPLPRA---RDKVAQ-ADPEAVAAFKKENAKRFRGF 225
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
AP + AC++ +G G+ E + F +L+ S H+FFA+R +K+
Sbjct: 226 DAP--AANIACVEKATDGSSFD--EGIAFERQEFMKLMFGVQSAAQRHIFFAERQAAKID 281
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ D + R +++V VIG G MG GI+ + I V + E+ E L +G I N
Sbjct: 282 GI-DPKIALREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGTGVIRKNYE 340
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
+G+L ++ A+ L LD+S D D++IEAV E++ +K+ IF++L+ P
Sbjct: 341 ASAAKGRLKPEQVEAAMGALTPTLDFSALADCDLIIEAVYENMDVKKDIFTKLDAIAKPG 400
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
ILA+NTS ++++ + T ++G HFFSPA+VM LLE+VR +T V+ +M +
Sbjct: 401 AILASNTSYLNIDEIASVTKRPGDVLGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALS 460
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K I+KV VV G C GF NR P A L+ G +ID +FG+P+G FQ
Sbjct: 461 KTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLLEGATPEQIDKVHVAFGMPMGAFQ 517
>gi|308802091|ref|XP_003078359.1| putative tetrafunct (ISS) [Ostreococcus tauri]
gi|116056811|emb|CAL53100.1| putative tetrafunct (ISS) [Ostreococcus tauri]
Length = 1573
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 154/284 (54%), Positives = 205/284 (72%)
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
EE + G +G+ +E FK+ V ++GLVH FFAQRAT+ VP VTD GLKPR ++ V
Sbjct: 1099 EEALKLGPEAGLQREPVNFKKAVSSPAAKGLVHFFFAQRATNIVPGVTDGGLKPRVMKSV 1158
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGGLMGSGIATA +L I VVLKE+ E+L G+ I++N+ +V +G++T+DKA
Sbjct: 1159 GVVGGGLMGSGIATACLLAGIGVVLKEIKQEFLDAGVGRIQSNLASMVRKGRMTEDKARK 1218
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++K L +F+ DMVIEAVIE++ LKQKIF LEK C P CIL+TNTSTID+ +
Sbjct: 1219 LMSLVKPTLSDDDFRQCDMVIEAVIENLDLKQKIFCNLEKICRPDCILSTNTSTIDITKI 1278
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
K + +RI+GAHFFSPAHVM L EI+RT+ T +Q+++D + + K I+K PVVVGNCTG
Sbjct: 1279 ATKMKNPERIVGAHFFSPAHVMQLFEIIRTKDTPSQILVDTLGLSKQIRKTPVVVGNCTG 1338
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
FAVNR FFPY+ SA LV +G D + ID AI FG+P+GPF+ G
Sbjct: 1339 FAVNRVFFPYTMSATALVDIGCDPYAIDRAIMMFGMPMGPFRLG 1382
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P VT V DGV +I + NPPVNALA+P++ GL+ +EA VKAIV+ G GG+FSG
Sbjct: 933 PGVTSSV-RDGVCVIEMSNPPVNALALPVLEGLEKALKEAQGDGRVKAIVIKGAGGKFSG 991
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
GFDI +K S + + + ++ L E KP VAA+E LALGGGLE+AM C AR
Sbjct: 992 GFDIGHLRKSTQGAPASDVGEFNA-ILCTLAEGGAKPCVAAIENLALGGGLEVAMSCAAR 1050
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
+A P QLGLPEL LGVIPGFGGTQRLPRLVGL K++EMML SKSI +EE KLG
Sbjct: 1051 VATPGAQLGLPELQLGVIPGFGGTQRLPRLVGLEKSLEMMLKSKSIKAEEALKLG 1105
>gi|186471950|ref|YP_001863268.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184198259|gb|ACC76222.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 706
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 270/517 (52%), Gaps = 11/517 (2%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVNAL + + GL E A + KA+++ G G F G DI F K
Sbjct: 20 LVTVDNPPVNALGVEVRRGLVAAIEAAEAYAVAKAVLIVGAGRNFIAGADIREFGK---P 76
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
+ +PDV N IE C KP++ A+ G ALGGGLE+A+ H R+A +LGLPE+
Sbjct: 77 PQMPTLPDV-----CNRIEACSKPVIVAIHGAALGGGLEIALAAHYRLAVAGAKLGLPEV 131
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
LG++PG GGTQR PRL+G A+ +ML K I +++ K+GL+D V S+++L +
Sbjct: 132 LLGLLPGAGGTQRAPRLIGAEAALSLMLSGKHIGAQDALKMGLVDRVGQSDDVLTEGLTY 191
Query: 197 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 256
A + + P +R L + +AR K + + +D + +
Sbjct: 192 AQQLLSEHAP-VRRTRDAQGLADTDAGAAAIAVARADTAKKSRGLLSPLKIVDCVNAALT 250
Query: 257 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 316
G+ E F E + LVH F A+R K P +PR + V+GG
Sbjct: 251 LPFEDGLRFERARFIECLDSPQRAALVHAFQAERQVQKAPETRSA--QPRPIASAGVVGG 308
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MG+GIA A + + V + E + L +G ++ GL+ +G+LT D L
Sbjct: 309 GTMGAGIAVALLDAGLPVTMIERDDASLARGRAHVDKVYDGLIAKGRLTHDAKAKKLARF 368
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
G Y + D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D++ + +
Sbjct: 369 AGSTSYDALAEADVVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDIDAIAAGIA 428
Query: 437 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 496
+IG HFFSPAHVM LLE+V R SA V+ + K ++KVPV G C GF NR
Sbjct: 429 RPQDVIGLHFFSPAHVMKLLEVVVPARVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNR 488
Query: 497 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
Y +A L+ G ++ID A+R G P+GP+Q
Sbjct: 489 MLAVYRAAADHLMEEGASPYQIDKAVRELGFPMGPYQ 525
>gi|312602592|ref|YP_004022437.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/ 3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Burkholderia rhizoxinica HKI 454]
gi|312169906|emb|CBW76918.1| Enoyl-CoA hydratase (EC 4.2.1.17) /
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
/ 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
[Burkholderia rhizoxinica HKI 454]
Length = 728
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 283/539 (52%), Gaps = 24/539 (4%)
Query: 3 APRVTMEVGND---GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
AP T V ++ V ++T+ PPVNAL + + GL D + A D+V A++L G G
Sbjct: 23 APSPTQPVSHERHGKVLVVTIDYPPVNALGVAVRRGLIDAIDAAEGCDEVAAVLLLGAGR 82
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F G L P S+ V IE C+KP+VAA+ G ALGGGLE+A+
Sbjct: 83 NFIAGADIREF------GKPPLPP--SLPQVCQRIESCRKPVVAAIHGAALGGGLEIALS 134
Query: 120 CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
H RIA P +LGLPE+ LG++PG GGTQR PRL+G A+++ L ++ + +E +LGL
Sbjct: 135 AHYRIATPGAKLGLPEVQLGLMPGAGGTQRTPRLIGARAALDLALSARHVNIDEALQLGL 194
Query: 180 IDAVVTSEE-----LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234
+D + S++ L V L A AR ++L D + ++ AR
Sbjct: 195 LDRISQSDDTRAEGLAYVQALLASHAGARPTRCAKALADRDA------SHAAVQAARADV 248
Query: 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294
+ + + ++ IE I G+ E + F + + GLVH FFA+R +K
Sbjct: 249 VRRSRGLFSPLKIVEAIEAAIDLPFDEGMKLERQAFLQCLDSPQRAGLVHAFFAEREAAK 308
Query: 295 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 354
P PR + V V+GGG MG+GIA A + V L E + L + ++
Sbjct: 309 TPESQHA--SPRTIDTVGVVGGGTMGAGIALAALDAGFPVTLIERDDASLARARAHVQRV 366
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
GL+ +GKL+ + L L G Y +VD+VIEAV E + +K+ IF+EL++ C
Sbjct: 367 YDGLIVKGKLSASASAATLSRLCGSTSYDALANVDLVIEAVFEDLVVKKAIFAELDRVCQ 426
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
+LATNTS +D++ + T +IG HFFSPA+VM LLEIV + A V+
Sbjct: 427 RGAVLATNTSYLDIDEIAASTGRASDVIGLHFFSPANVMKLLEIVVPAKVDADVVATAFE 486
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K ++K PV G C GF NR Y +A ++ G ++ID AIR FG P+GP+Q
Sbjct: 487 FAKRLRKTPVRAGVCDGFIGNRLLAVYRAAADAMMEDGASPYQIDRAIRDFGFPMGPYQ 545
>gi|424853225|ref|ZP_18277602.1| fatty oxidation complex, alpha subunit FadB [Rhodococcus opacus
PD630]
gi|356665148|gb|EHI45230.1| fatty oxidation complex, alpha subunit FadB [Rhodococcus opacus
PD630]
Length = 687
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 282/526 (53%), Gaps = 32/526 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + D+V AIVL G G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDEVDAIVLIGAGTNFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ +IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPTVIAVIEAGAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---E 188
GLPE+TLG+IPG GGTQR RL+G ++ +E++ + + E+ + GLID VVT E
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLIGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAE 191
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ +R A R K +R+L LG+ + EV +A ++ A PQ A +
Sbjct: 192 AIHFAR------ALRGKRILRNL---PVLGA--DPVEVEHVATAALRRAA--RPQTVAAV 238
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTDIGLKPR 306
I G E F L S L H+FFA+RA K P + R
Sbjct: 239 GAILMGSSAPADRAFQHERAEFDRLRNGTESSALRHLFFARRAALKANRPALA------R 292
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
++ V V+G G MG+GIA A + + VVL + + + ++ RG+VTRG+LT+
Sbjct: 293 ELKSVGVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLKQAYRGMVTRGRLTE 352
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
A L +L + ++ D+VIEAV E + +K+ + +LE PH LATNTS +
Sbjct: 353 SDAQQHLSLLTAGTTIRDLEETDLVIEAVYEDMEVKRAVLRQLETVLRPHVPLATNTSYL 412
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D+N + + R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++
Sbjct: 413 DINEIAAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILA 472
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR + Y + L++ G ++D+A+ FG +GPF
Sbjct: 473 GVCDGFIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPF 518
>gi|404318260|ref|ZP_10966193.1| 3-hydroxyacyl-CoA dehydrogenase [Ochrobactrum anthropi CTS-325]
Length = 659
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 275/527 (52%), Gaps = 32/527 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+ ++T+ NPPVNA + + GL A++ ++A VL+G G F GG DI F K
Sbjct: 17 DGILVVTIDNPPVNATSAEVRKGLAAAIHHASATAAIRATVLSGAGKIFIGGADIREFGK 76
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P V L V+ +IE+ KP+VA + G ALGGGLE+A+ HARIA+
Sbjct: 77 ----------PPVEPTLPDVITIIENADKPVVATINGPALGGGLEVALAAHARIASTSAS 126
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
LPE+ LG++PG GGTQRLPRL+G A++M+ + I +E +L LID + +
Sbjct: 127 FALPEVKLGIVPGAGGTQRLPRLIGSLAALDMIATGRQIAPDEALQLDLIDRISDGD--- 183
Query: 191 KVSRLWALDIAARRKPWIRSLH---RTDKLGSLSEAR-EVLKLAR-LQAKKTAPNMPQHQ 245
V+ AL A KP R+ + +A+ ++LK AR A A + Q
Sbjct: 184 LVADAIALAHALVGKPLRRTCDLPVTAPDAATFEQAKAKILKKARGATAPGEAARLVQLS 243
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+ + E G+ +E F L + + L H+FFA+RA KV + KP
Sbjct: 244 TTISIAE---------GLAEERTTFIRLRDSEEAAALRHLFFAERAAGKVEGME---AKP 291
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ + + G GLMGSGIA A + V+ E +E KG I ++ V G+L+
Sbjct: 292 LALSTIGIAGTGLMGSGIAVACLAAGYTVIGYETTAEAAAKGHARISDMIQKAVDTGRLS 351
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ A+ L D + D ++VIEAV + +K +F EL+ PP ILATNTS
Sbjct: 352 TEAADAQRAKLSVSADMAALADANLVIEAVFDDFTVKASLFRELDALLPPATILATNTSY 411
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
++ + + T+ DR++G HFFSPA++M LLE+VR TS + + + + IKK+P+V
Sbjct: 412 LNPDELAAVTNRTDRVLGLHFFSPANIMRLLEVVRCAETSDETLATGIAFARKIKKLPIV 471
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
G C GF NR F Y A +++ G ID A+ ++G P+G F
Sbjct: 472 TGVCEGFIGNRMFSAYRTEAEKMLAEGAYPEDIDRAMEAYGFPMGLF 518
>gi|357024730|ref|ZP_09086872.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
gi|355543398|gb|EHH12532.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
Length = 689
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 292/536 (54%), Gaps = 29/536 (5%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSGG 64
+ V +DG VA++T+ NPPVNA++ + L A RDD V AIV+ G F G
Sbjct: 5 VSVASDGDVAVVTIDNPPVNAMSFHVREPLHQAL--AALRDDPSVAAIVIACAGRTFVAG 62
Query: 65 FDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
DI F K P EL V+ L+E KP VAA+ G ALGGGLELA+GCH
Sbjct: 63 ADITEFGK----------PVQQPELRAVIALLETIAKPTVAAIHGTALGGGLELALGCHF 112
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
R+A K +LGLPE+ LG++PG GGT RLPRLVG KA+ M++ I + E + GL+DA
Sbjct: 113 RVADSKAKLGLPEVKLGLLPGGGGTVRLPRLVGAEKALGMIVSGAPIGAVEALEAGLVDA 172
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA---REVLKLARLQAKKTAP 239
V E + + R +A ++ A+ ++ R D+LG A R+ +LA K A
Sbjct: 173 VFDGELVAQAVR-FASEMVAKGGRFLPVRDRNDRLGKTDLAAFDRQAAELA-----KKAR 226
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ AC + I + E ++F +LV D SR H+FFA+R ++ P
Sbjct: 227 GLEAPIACAQAVRNAISLSFDEALAAERELFLKLVAGDQSRAQRHLFFAEREAARGPG-K 285
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D+ R + ++ +IG G MG GIA A V L E N E L +G+ TI+ N V
Sbjct: 286 DVAR--RKITRIGIIGAGTMGGGIAMAFANGGFPVTLLETNEEALQRGLATIDKNYAVSV 343
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
RG LT+ L + KG DY++ D D+++EAV E + +KQ++F +L+ P IL
Sbjct: 344 GRGSLTEAARQQRLGLFKGSTDYADLADCDLIVEAVFEEMAVKQEVFGKLDAVAKPGAIL 403
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D+N + TS ++G HFFSPA+VM LLEIVR E+T+ + ++ + + I
Sbjct: 404 ATNTSYLDVNAIAASTSRPQDVVGLHFFSPANVMKLLEIVRAEKTAPDALATVVELARGI 463
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
KVPVVVG C GF NR + L+ G +ID FG PIGPFQ G
Sbjct: 464 GKVPVVVGVCHGFVGNRMLAARGAESEALLLEGATPSQIDRVFTDFGWPIGPFQMG 519
>gi|389684613|ref|ZP_10175941.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
gi|388551836|gb|EIM15101.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
Length = 703
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 284/528 (53%), Gaps = 28/528 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L PPVNAL+ P+ A + + E A + V+AI+L G G FS G DI F
Sbjct: 13 LALIGLSRPPVNALSQPLRAAIIEACERAAADIRVQAIILYGEHGLFSAGADIGEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD+ LV + + KP+VAA+ LALGG LELA+ C R+ P T++GL
Sbjct: 69 GTEACFAEPDLPSTLVR--LTEIPKPLVAAMGKLALGGALELALACGYRMGEPGTRVGLS 126
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 193
E+ LG++PG GGTQRLPRL+G A+ ++L + I +E LG++D + +S E+LL +
Sbjct: 127 EINLGLLPGAGGTQRLPRLIGAESALNLILSGEQIDAERARMLGILDRIASSAEQLLDEA 186
Query: 194 RLWA---LDIAARRKP---WIRSLHR--TDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+A ++ A +P W + D L E +RL + +
Sbjct: 187 CAYANELIECGAPARPAEAWPKPAEDLPDDFLARYRAEHEPRWKSRLAPRLVLSAL--EA 244
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 304
ACL +EEG+ +E +FK+ S+ L HVFFA+R +VP + +DI
Sbjct: 245 ACLLPLEEGLA--------RELALFKQAEASRQSKALRHVFFAERKAGRVPGIGSDI--T 294
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + KVAVIG G +G+GIA + I V L E L +G+ I + V GK+
Sbjct: 295 PRKLDKVAVIGAGPLGAGIAMSFADVGIPVALLEPEGGALDRGLMQIRKLYQASVKHGKM 354
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + + +L G LDY + D D+VIEA+ E +K+++F LE+ C P ILAT+TS
Sbjct: 355 SAAQLQQRMDLLFGTLDYEDLADADLVIEALYEKPGVKRQVFLSLEQVCKPGAILATSTS 414
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++D++ + +IG HFFSPA+VM L+E+VR + T+ +V+ M + K I K+PV
Sbjct: 415 SLDIDAIAASLGRPQDVIGLHFFSPANVMRLVEVVRGKATAPEVLASAMQIAKRIGKLPV 474
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ G G R PY++ A LV G ++DS + L +G F
Sbjct: 475 ISGAGQGAIGERMLEPYAREAHRLVLEGATPAQVDSVLTGLDLNMGVF 522
>gi|294010368|ref|YP_003543828.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673698|dbj|BAI95216.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 689
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 190/525 (36%), Positives = 277/525 (52%), Gaps = 17/525 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ + GL+ + E+A ++V AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSASLRQGLQAELEQAFGDEEVGAILLLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++ KP++AA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 PW---QPPSLPDLCA-----MLDGAPKPVIAAIHGTALGGGFELALACHYRVAARSAKVG 122
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG++PG GGTQR+PR+VG A++++ + I + E LGL+DAVV L +
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGAEAALDIITSGRQIKAAEALSLGLVDAVVDDAALAEE 182
Query: 193 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +A + A KP IR R D + E+ + A +
Sbjct: 183 ALAFARRVVADGGAKPRIRD--RADAIEGDRNRPELFTAFAAANARRFKGFVAPAAIIGA 240
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--LKPRGV 308
+E + G+ KE +F+ LV S HVFFA+R ++VP DIG + +
Sbjct: 241 VEAAVTLPFDEGLAKETALFERLVASPESAAQRHVFFAEREAARVP---DIGPDISAIDI 297
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
R V VIG G MG GI + I + L E E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPITLVETTQEALDRGIATIRRNYETTAAKGRMTAAQ 357
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ ++ LD + D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMGLISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIAKLGAILASNTSFLDL 417
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NRIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGV 477
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR P A ++ G + ID + +G +G FQ
Sbjct: 478 CDGFIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQ 522
>gi|383864612|ref|XP_003707772.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Megachile rotundata]
Length = 1200
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 284/545 (52%), Gaps = 32/545 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA++T+ +P VN L ++ + + + + +IVL +G G F G DI +
Sbjct: 483 DNVAVLTIDSPGAKVNTLNEEVMNEVAAVLQNVQTDSTINSIVLISGKAGCFIAGADITM 542
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
Q A D + ++N IE KP+VAA++G LGGGLE+A+ CH R+A
Sbjct: 543 IQGCKTADD-GYKISFDGQQILNAIEKSYKPVVAAIQGSCLGGGLEVALACHCRLAVDDQ 601
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 185
KT LGLPE+ LG++PG GGTQRLPRL+ L A++M L K++ + + K GL+D +V
Sbjct: 602 KTNLGLPEVKLGLLPGAGGTQRLPRLISLPNALDMALTGKNVKAVKAKKFGLVDILVNRL 661
Query: 186 -------SEELLKVSRLWALDIAARRKPWIRSLHR-----TDKLGSLSEAREVLK---LA 230
E ++ A+ +A + R DKL + + + +K
Sbjct: 662 GPGIGTPEENTMRYLEETAIQVAKDVANGTLKIERGPKTLPDKLMKYALSYKFIKDQIFK 721
Query: 231 RLQ---AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
R++ KKT P LDVI G+ G +G EA+ F EL + S+GL+ +FF
Sbjct: 722 RIKNETMKKTGGLYPAPLKILDVIRTGLDKGPAAGYEAEARAFGELAVTPQSKGLISLFF 781
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347
Q K G V+KVAV+G GLMG+GI + VV+K+ N L +G
Sbjct: 782 GQTICQK----NRFGTPKSAVKKVAVVGAGLMGAGIIQVSVDKGFDVVMKDTNQVGLYRG 837
Query: 348 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 407
I I+ + V R K + + + L L LDY+ FK+ D+VIEAV E + +K K+
Sbjct: 838 INQIQKGMETAVKRKKYSGIQRDKYLARLDATLDYNSFKNADIVIEAVFEDIAIKHKVIK 897
Query: 408 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467
E+E P HC++ATNTS I +N + +S D++IG H+FSP M LLEI+ + TS +
Sbjct: 898 EIEANTPQHCVVATNTSAIPINKIAAGSSRPDKVIGMHYFSPVDKMQLLEIITHDGTSTE 957
Query: 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFG 526
I + VG KV + VG+ GF R S+S RL+ GVD +DS I+ FG
Sbjct: 958 TIKTAVDVGLKQGKVVITVGDGPGFYTTRILSAMLSESVRLMQE-GVDPTDLDSMIKKFG 1016
Query: 527 LPIGP 531
P+GP
Sbjct: 1017 FPVGP 1021
>gi|294010197|ref|YP_003543657.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673527|dbj|BAI95045.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 654
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 287/534 (53%), Gaps = 32/534 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+G+ + PPVNAL + L D EA + V+A+V+ G F G DI F
Sbjct: 13 REGIGECVVDAPPVNALGRDVRQALLDAVAEAAADPVVEALVIRCAGRTFFAGADIREF- 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ VV IE+ KP++AA+ G ALGGGLE+A+G H RIA +
Sbjct: 72 -----GKPPLPP--SLPEVVAAIEESAKPVIAAIHGTALGGGLEVALGAHRRIAVSSARF 124
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRL RLVG+ KA+ M++ I++EE + GL+D V L++
Sbjct: 125 GLPEVKLGLLPGAGGTQRLSRLVGVGKALAMIVGGDPISAEEALEAGLLDRKVADGTLIE 184
Query: 192 VSRLWALDIAARRKPWIRS----LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+R +A + A P +R+ + D++ ++ + R + AP AC
Sbjct: 185 AARQFAREAAGEGAP-VRTRDLPVADPDRVDTVLDEYGNANPRRFGGQD-AP-----AAC 237
Query: 248 LDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKP 305
++VI +G+ H + L E F L S L HVFFA+R SKV + D P
Sbjct: 238 VEVIRKGL-HVPFDEALALERAAFTRLRDGAQSAALRHVFFAEREVSKVAGIDADTPRLP 296
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR---- 361
+ +V VIG G MG GIA A + + VVL E E L G+ A VR L+ R
Sbjct: 297 --IDRVGVIGAGTMGRGIAMALLTAGLPVVLVEQRREALDAGL----AGVRDLIARAVKG 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G++ + A+ A L G L Y + +VD+VIEA E++ +KQ IF L P ILAT
Sbjct: 351 GRMDRASADAASARLTGSLSYDDLAEVDLVIEAAFETMEVKQVIFRALGGVAKPTAILAT 410
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + TS ++++G HFFSPA++M LLEIVR RTS QV+ + + K + K
Sbjct: 411 NTSYLDVDAIAACTSRPEQVLGLHFFSPANIMKLLEIVRGARTSPQVLATALDLAKRLGK 470
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
+ VV GN GF NR +A + G + ID + +FG+P+GPF+ G
Sbjct: 471 IAVVAGNAHGFIGNRMLMARRLAAEAMALEGASPYAIDRVLVAFGMPMGPFRIG 524
>gi|121605036|ref|YP_982365.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120594005|gb|ABM37444.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
Length = 686
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 292/532 (54%), Gaps = 32/532 (6%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T ++G+ V +I + NPP+NA ++ + GL ++ ++ D+ A V+ G G F G D
Sbjct: 11 TEQIGD--VLLIEINNPPINAGSLTVRQGLTAAIQQLQAQADLVAGVIIGGGTTFVAGSD 68
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
+ F + + D + V+ LIE C KP+VAA+ G ALGGGLELA+ C ARIA
Sbjct: 69 LREFGQP--------LQDPQMPAVIALIEACSKPVVAALHGAALGGGLELALACDARIAL 120
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
T LGLPE+TLG+IPG GGTQRLPR VG+++AIEM+ + IT+++ L LID VV
Sbjct: 121 AGTLLGLPEVTLGIIPGAGGTQRLPRRVGVARAIEMICSGERITADKALALRLIDEVVAG 180
Query: 187 EELLKVSRLWALDIAARRKPWIRSLH-RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+ L+ + A RK IR T+ ++ +A + L+A K P +
Sbjct: 181 D--LQAHAMALARRLAGRKCRIRDEQVPTEDAAAIEQAEQTA----LRAGKRRPAVLAAI 234
Query: 246 ACLDV-----IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
A + I+EG+ +E VF++L + + L H FFA+R +K+P
Sbjct: 235 AAVKNAARLPIDEGLA--------QERAVFQQLRVSTEAYALRHQFFAEREAAKLPAA-- 284
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+ PR V+ VAVIG G MG+GIA + + V+L E + L +G + + + + V
Sbjct: 285 LQAAPRPVQTVAVIGAGTMGAGIAICALDAGLNVILLEQDDVALQRGQQRVAEHYQSRVA 344
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
GK+ A + L D+ + D+VIEAV E +P+KQ +F +++ +LA
Sbjct: 345 AGKVKAAVAAASQARLSPTTDWVQLGRADLVIEAVFEDMPVKQDVFRKIDAHARSGAVLA 404
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + + T+ ++G HFFSPA+VM LLE+VR ERT+A V+ M +GK +K
Sbjct: 405 TNTSYLDVDAIAQLTARPQDVLGLHFFSPANVMKLLEVVRGERTAADVVATGMALGKKLK 464
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K+PV+ GN GF N + Y + ++ G +D A+ G +GPF
Sbjct: 465 KLPVLCGNAFGFIGNCIYNAYRKQCEFMLEDGAWPEAVDQALTDLGFAMGPF 516
>gi|213511462|ref|NP_001133776.1| Peroxisomal bifunctional enzyme [Salmo salar]
gi|209155296|gb|ACI33880.1| Peroxisomal bifunctional enzyme [Salmo salar]
Length = 716
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 285/543 (52%), Gaps = 61/543 (11%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVNAL+ + G+ D + A V ++V+ G G+F GG DI F
Sbjct: 11 VALITLHNPPVNALSAAVRQGIVDAVQRALKDPKVTSVVICGQNGKFCGGADIREF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
AG + P V + ++ IE KP+ AA+EG+ALGGGLELA+ CH RIA K LGLP
Sbjct: 67 -AGPMLGPPLVPM---IHAIEAVDKPVAAAIEGVALGGGLELALACHYRIAHSKAVLGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------E 188
E+TLG++PG GG+QRLPRL+GL+ A++++ + +++ E KLG++D V S E
Sbjct: 123 EVTLGLLPGAGGSQRLPRLIGLTAALDLITTGRHVSAAEALKLGVLDQVTDSNAVDLAVE 182
Query: 189 LLKVSRLWALDIAARR--------KPWIRSLHRTDKLGSLSEARE---VLKLARLQAKKT 237
++ LD +RR P + SL DK+ S R + +A ++A +
Sbjct: 183 FVRSVAGQPLD--SRRLSTLPCPCPPDVDSL--LDKVMSKVRQRSRGALAPVACVRALRA 238
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--V 295
A ++P Q G+ KE ++ L +R L + FF+QR K +
Sbjct: 239 AASLPYAQ----------------GMEKERELMATLFNSGQARALQYAFFSQRVVGKWSL 282
Query: 296 PNVTDI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 354
P+ R + K AVIG G MG GI A L I VV E + L + + + A
Sbjct: 283 PSGARWDNSTARIISKAAVIGLGTMGRGIVVALALTGISVVAVETQEKQLAEASRVVPA- 341
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYS----EFKDVDMVIEAVIESVPLKQKIFSELE 410
L ++ L GV+ +S + +V++VIEAV E + LK ++F L
Sbjct: 342 --------MLQREAGRRRLATPPGVISFSSNLQDVSEVELVIEAVFEDMSLKLQVFKHLS 393
Query: 411 KACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVIL 470
C P +L +NTS +D++ + T S ++G HFF+PAHVM LLE+V R+S + +
Sbjct: 394 SVCRPGTLLCSNTSGLDIDQLAAVTQSPGLVVGMHFFAPAHVMKLLEVVYGPRSSPEAVA 453
Query: 471 DLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
M +GK + KV V VGNC GF NR PY + A L+ G ++D A+ FG P+G
Sbjct: 454 TAMQLGKRMGKVGVAVGNCPGFVGNRMLKPYLEQANFLLEEGATPRQVDEALEEFGFPMG 513
Query: 531 PFQ 533
F+
Sbjct: 514 VFR 516
>gi|226943850|ref|YP_002798923.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
gi|226718777|gb|ACO77948.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
Length = 697
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 290/523 (55%), Gaps = 12/523 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+++L PP+N L+ + L + A + V+AIVL GN FSGG DIN F
Sbjct: 3 HDGVAVLSLDRPPINNLSFELRTHLLQALDAANADPAVEAIVLHGNDKVFSGGVDINEF- 61
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G+ + P S+ ++ +E+ +KP+VAA+ L LGGGLELA+GCH R+ + ++
Sbjct: 62 ---GSDLATRSP--SLPELIRAVENSRKPVVAALGDLCLGGGLELALGCHYRVFSASARI 116
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GGTQ LPR +GL A+ ++L + + + L+D + T E+L
Sbjct: 117 GLPEVTLGLLPGAGGTQLLPRAIGLDAALNLILSGRQQAAADFRDTALVDELAT-EDLRA 175
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK-TAPNMPQHQACLDV 250
+ +A ++A PW R R ++ E RL+ +K P +
Sbjct: 176 AAVDFARRLSADTVPWPRLRDRPLRVEVEDELYIHFVRDRLKGQKGQGPAPLAALEAVAA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
V G+ +E ++F L SR L H F A+RA K+P + D V +
Sbjct: 236 AGRLPVD---EGLEEEGRLFAGLHAGPQSRALCHAFLAERAAGKIPGIDD-STPTIPVER 291
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V V+G G MG+GIA + V L E + L +G+ + + GL+ + +L Q + +
Sbjct: 292 VGVVGAGTMGTGIAIVFLNAGFEVALLESGEQALERGLAVVREHFAGLLAKKRLDQAQCD 351
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
L L G LDY+ DV + +EAV E + +K+++ L++A P ILA+NTST+DLN+
Sbjct: 352 ALLGKLSGSLDYAALGDVQLAVEAVFEDLEVKRQVLRRLDEALPDGAILASNTSTLDLNL 411
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ E TS + ++G HFFSPA VM LLE+VR RT+ V+ M +GK ++KV V G C
Sbjct: 412 LAEATSRPESVVGLHFFSPAQVMRLLEVVRGRRTADSVMATAMRLGKRLQKVSVASGVCD 471
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y + A LL+ G ++ID A+ ++G+ +GPF+
Sbjct: 472 GFIGNRMLNEYLRVAGLLLDAGALPWQIDRALETWGMAMGPFR 514
>gi|324501522|gb|ADY40676.1| Trifunctional enzyme subunit alpha [Ascaris suum]
Length = 765
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 288/555 (51%), Gaps = 42/555 (7%)
Query: 6 VTMEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFS 62
V++ V D VA++ + NP N L + L E + + ++ A++++G F
Sbjct: 38 VSLRVDGD-VAVVKIDNPGAKENTLNATVSRQLMQAMERIENDEGIRSAVLISGKPNSFI 96
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI + +V A + + + IE KKP+VAA+ G +GGGLELAM CH
Sbjct: 97 AGADIGMLVRVKNAAEAQQISS-EAQRGFARIERSKKPVVAAIMGTCMGGGLELAMACHY 155
Query: 123 RIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
RIA +PKT+L LPE+ LG++PG GGTQRLP+LV ++ A++MML K++ ++ +GL+
Sbjct: 156 RIAVNSPKTRLALPEVMLGLLPGAGGTQRLPKLVSITNALDMMLTGKTVRPQKAKAIGLV 215
Query: 181 DAVV---------TSEELLKVSRLWALDIA----------ARRKPWIRS-----LHRTDK 216
D VV E L + A+D+A R++P + L R
Sbjct: 216 DHVVQPIGMGLKPADENNLDYLQKIAVDVARGLSSGKLKFERKRPPLERVTNYFLTRRPL 275
Query: 217 LGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 275
L S+ VLK+AR + K+TA N P LDV++EG+ G G E+K F EL
Sbjct: 276 LDSV-----VLKMARNKVMKQTAGNYPAPLKILDVVKEGLSTSGTEGYDAESKAFGELSQ 330
Query: 276 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 335
L+ VF K D R K+AVIG GLMG+GIA I I V
Sbjct: 331 TTQCNALIGVFHGSSDCKK-----DKYGPARKTEKLAVIGAGLMGAGIANVSIDKGIRTV 385
Query: 336 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 395
L +++ L +G+ I + + G V + K+T + +N + LK L Y +D D+ IEAV
Sbjct: 386 LVDMHDAGLSRGMNQIYSQLNGSVKKKKITPMQKDNYMANLKPSLSYDALRDCDVAIEAV 445
Query: 396 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 455
E + LK KI +LE+ P HC++A+NTS + ++ + + +++IG H+FSP M L
Sbjct: 446 FEEIALKHKIVKQLEEVVPSHCVIASNTSALPISEIASVSKRPEQVIGMHYFSPVEKMQL 505
Query: 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 515
LE++ T +TS + + +G KK+ VVV +C GF V R P L+ GV
Sbjct: 506 LEVITTNKTSKETLAVAAQLGLAQKKLVVVVKDCPGFFVVRCLCPMMSEVVRLLQEGVQP 565
Query: 516 FRIDSAIRSFGLPIG 530
+D +++G P+G
Sbjct: 566 QALDELTKAYGFPVG 580
>gi|148259275|ref|YP_001233402.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Acidiphilium cryptum
JF-5]
gi|146400956|gb|ABQ29483.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidiphilium cryptum JF-5]
Length = 698
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 200/539 (37%), Positives = 291/539 (53%), Gaps = 22/539 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A ++GLPE+ LG++PG GGTQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 181 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 299 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALARGLDRVRGTYD 342
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V RG L + + G D+ + D+VIEAV E + LK+++F+ L+ P
Sbjct: 343 VSVQRGALPAGTTEKRMALFSGSTDWGVIAEADIVIEAVFEELGLKKEVFARLDGIARPG 402
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF G
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMG 521
>gi|126731621|ref|ZP_01747426.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sagittula stellata E-37]
gi|126707787|gb|EBA06848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sagittula stellata E-37]
Length = 650
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 283/521 (54%), Gaps = 18/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AI+T+ NPPVNA+ + + GL D E + + ++A+VL G F G D+ F +
Sbjct: 11 IAIVTIDNPPVNAVGLAVRQGLWDAVERTEADETIRAVVLACAGRTFIAGADVTEFDQAP 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A +PD+ + LIE KP VAAV G ALGGGLE AM CH RI +LGLP
Sbjct: 71 VA---PHLPDLLL-----LIERATKPWVAAVHGTALGGGLETAMACHHRIMDAGAKLGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLGVIPG GGT RLPRLV A++M+ K I++ E + GL DAV + L +
Sbjct: 123 EVTLGVIPGAGGTVRLPRLVAAETALQMITTGKPISASEAVQAGLADAVAVQDVLAE--- 179
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
A+D+A R P L D+ + A + K A +A + +
Sbjct: 180 --AIDLA-RTAPAPTPL--LDRAAQAPTDPVLWDAAAAKILKKAAGQTAPKAAVQALRNA 234
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
+ + E + F L S L H+FFA+RAT++V + G+ PR + ++ +I
Sbjct: 235 YEMDAQAALAAERETFLTLRSAPQSAALRHIFFAERATARVDRIK--GVAPRPLNRIGII 292
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MG+GIA A +L+ V + E +++ G + + G + RG ++ ++ ++ +
Sbjct: 293 GGGTMGAGIAAACLLSGYSVQMIERDADAAEAGKARVSGTLDGSLKRGLISTEQHDSMTR 352
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
YS D D+VIEAV E + +K+K+F+++E A P I+ATNTS +D+N +
Sbjct: 353 AFAASDSYSALGDTDLVIEAVFEDMEVKKKVFAQIEAAVGPDAIIATNTSYLDVNEIAAS 412
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T + R++G HFFSPAH+M LLEIV + S Q + + K ++K+PV+ G C GF
Sbjct: 413 TGTPSRVVGLHFFSPAHIMKLLEIVVPDGVSDQTLATAVAFAKSLRKIPVLAGVCDGFIA 472
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
NR Y + A ++ G + +D+A+ FGLP+G FQ G
Sbjct: 473 NRIMSAYRREAEYMIEDGALPWEVDAAMVGFGLPMGIFQMG 513
>gi|134297067|ref|YP_001120802.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
gi|134140224|gb|ABO55967.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
Length = 711
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 280/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + ++T+ +PPVNAL+ + GL D + A + V+A+++ G G F G DI F
Sbjct: 20 RDALLVVTIDHPPVNALSADVRRGLADALDAAQADHAVRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLALPGA 129
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEARALGLVDRVARSDDT 189
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ L AR + K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAP-VRRTRDAQGLAERTAAQAALAAARAELPKKSRGLFSPAKIVD 248
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P R V
Sbjct: 249 AVEAALTLSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASA--RAVE 306
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+V V+GGG MG+GIA A + + V + E + L +G +E LV +G++T D
Sbjct: 307 RVGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGRAHVEKVYDALVAKGRMTPDAR 366
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ L G Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARVARLDGSTRYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV +R SA+V+ + + +KK PV G C
Sbjct: 427 ALAAGIDRPTDVIGLHFFSPANVMKLLEIVVPKRVSAEVVATAFALARQLKKTPVRAGVC 486
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQ 530
>gi|359797543|ref|ZP_09300127.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
gi|359364654|gb|EHK66367.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
Length = 695
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 290/526 (55%), Gaps = 15/526 (2%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
ME G VA+++L NPPVN+L+ + A L ++A + D V+A+V+ G+G F G +I
Sbjct: 8 MESGQ--VALLSLRNPPVNSLSAALRAELHAAIQDALADDAVRALVIAGDGQFFCCGAEI 65
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
F + +L V+ LIED KP+VAA+ G ALGGGLELA+GCH R+A
Sbjct: 66 REFNTPMSGREPTL------RTVIALIEDASKPVVAAIHGAALGGGLELALGCHYRVAQS 119
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
LGLPE+ LGV+PG GGTQRLPR+V + +A+ M+ +I +E GL+D V S+
Sbjct: 120 GASLGLPEVKLGVLPGAGGTQRLPRIVDVERALTMICGGDAIDAETAADCGLLDEVYGSD 179
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
L + + +AL ++A P L + ++A V + AR +A + AC
Sbjct: 180 -LRQRAAAYALKVSA--VPLDGRRVGRQPLAAPADA-GVYERARQEAARRYRGCVAPLAC 235
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ +E G+ E + F ELV S+ H+FFA+RA K+P
Sbjct: 236 VACVEHAAGATLQDGLAFERERFLELVNGGQSKAQRHLFFAERAAVKLPPEWRAA---GA 292
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+RKV V+G G MG GIA + + VVL E +++ L +G I N +GKL+
Sbjct: 293 IRKVGVVGAGTMGGGIAMSLANAGLDVVLIERDAQALERGWSAIRKNYAATAAKGKLSAV 352
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ ++ LD E +D D+VIEA E + +K+++F L++ C P ILA+NTS +D
Sbjct: 353 QVEERQGRIRASLDMDELRDADLVIEAAFEDMGVKRQVFEALDRICKPGAILASNTSRLD 412
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T +++G HFFSPA+VM LLE+V+ T V+ + + + + K+PV+VG
Sbjct: 413 VDQIAGFTGRPAQVLGTHFFSPANVMRLLEVVKGRETDGNVVAAVFKLARAMGKLPVLVG 472
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR PY++ A L+ G ++D A++ FGL +GP +
Sbjct: 473 VCDGFVGNRMVSPYTREAHFLLEEGATPSQVDGALQRFGLAMGPLR 518
>gi|302341530|ref|YP_003806059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
gi|301638143|gb|ADK83465.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
Length = 709
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 281/522 (53%), Gaps = 6/522 (1%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ T+ NPPVN L+ + L FEEA D V AIVLTG G F G DI QK
Sbjct: 14 DGVAVFTMNNPPVNQLSDYFIKDLVAAFEEAWKDDQVYAIVLTGEGKNFVAGADITQLQK 73
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ D + + N IE KP++AA+ G LGGGLELAM CH R+A LG
Sbjct: 74 MKNR-DEAFGLVMEGHKFYNAIELSPKPVIAAINGNCLGGGLELAMCCHYRVAVKGVSLG 132
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE++LG++PG GGTQRLPR++GL A +MM K I +E + GL+D V ++LLK
Sbjct: 133 LPEVSLGLLPGGGGTQRLPRIIGLPNAAQMMTTGKPIKAEVAFVRGLVDEVCAPDKLLKK 192
Query: 193 SRLWALDIAAR-RKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ A AR +R+ T +L S +E + R + LD
Sbjct: 193 AFGAAKMFKARMYNQKVRTARNTFYRLPSFNEKLHFMNYIRAMVGAQSKGYIAPGKILDC 252
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+++G+ + + EA F +LV ++ L+ +F R+ ++P + D LKP K
Sbjct: 253 LDKGLSADFEADLKVEANGFADLVTSAVAKNLIGMFLNTRSAGRLPRIKD--LKPAKPMK 310
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
VA +GGG+MG GI + N VL ++N L KG+++++ ++ + K+ +
Sbjct: 311 VAQLGGGVMGCGIVHLLLANGFECVLWDINDAALAKGVESVKKTFAFMIKKKKMKPADLD 370
Query: 371 NAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L + L + DVD+VIEAV+E++ +KQ+I+ LEK C P I TNTS + +
Sbjct: 371 KLLAEKLTTTTKLEDLGDVDLVIEAVLENMKVKQEIWLTLEKTCRPDVIFGTNTSALPIT 430
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ R+IG HFF+PA M LLEI+ ++TS Q + + G+ IKKVP+VV +
Sbjct: 431 EMASVLKDPGRMIGLHFFNPAERMQLLEIICAQQTSDQTLATSVDFGRRIKKVPIVVNDG 490
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF V+R + LV+ GV I+ A+ +FG+P+GP
Sbjct: 491 PGFYVSRQLGGLMGGSVFLVADGVSGEAIEKAMMNFGMPMGP 532
>gi|90420390|ref|ZP_01228298.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
gi|90335724|gb|EAS49474.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
Length = 691
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 279/530 (52%), Gaps = 12/530 (2%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P T++V + +A++TL NPPVNAL+ + G+ E A + VKAIVL G F
Sbjct: 6 PATTLDVEGE-IAVLTLDNPPVNALSHILREGVAAGLEAAAADPAVKAIVLICAGRTFIA 64
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI F K A + + D IE KP++AA+ G ALGGGLELA+ CH R
Sbjct: 65 GADIKEFGKPIAAPTLQDLQD--------RIEALDKPVIAALHGTALGGGLELALACHYR 116
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IA+P ++GLPE+ LG+IPG GGTQRLPRLVGL +A++M+L + + LG++D +
Sbjct: 117 IASPSAKVGLPEIKLGIIPGAGGTQRLPRLVGLPRALDMILTGTPVGAASAVTLGIVDEL 176
Query: 184 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ + R +A I +P R +L L+ AR + +
Sbjct: 177 AAGDLRAEALR-FANAIVTEGRPLRRIRDEAQRLDG-ENVDAALEGARERHGRKMRGYES 234
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
+ +D + G+ +E ++F EL+ S+ +VF A RA +K+ ++
Sbjct: 235 FERAMDAVANAARLPFDEGLAREREIFVELLGGTQSKAQRYVFGATRAVAKIADIP-ADT 293
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
R + +V +IG G MG GIA + I V + E E L +G TI N V RG+
Sbjct: 294 PTRKIGRVGIIGAGTMGGGIAMKFLSAGIPVTIIEQAQEALDRGTGTIAKNYAASVRRGR 353
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ + A A +L L++ + D D++IEA E + +K++IF+ L+ ILA+NT
Sbjct: 354 IRAEDAEKANALLTPSLEFDDLADCDLIIEAAFEEMAVKKEIFARLDAIARDGAILASNT 413
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + T ++G HFFSPA++M LLE+VR T+ VI M +G+ I K
Sbjct: 414 SYLDIDEIASVTKRPADVLGMHFFSPANIMKLLEVVRGRETAKDVIATAMKIGRDIGKTA 473
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+VG C GF NR + A L+ G + +D + FGLP+GPFQ
Sbjct: 474 VLVGVCHGFVGNRMLSARQREANKLILEGAMPWDVDRVLTDFGLPMGPFQ 523
>gi|326402430|ref|YP_004282511.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
gi|325049291|dbj|BAJ79629.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
Length = 698
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 291/539 (53%), Gaps = 22/539 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
H R+A ++GLPE+ LG++PG GGTQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 181 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 299 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALSRGLDRVRGTYD 342
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V RG L + + G D+ + D+VIEAV E + LK+++F+ ++ P
Sbjct: 343 VSVQRGALPAGTTEKRMALFSGSTDWGVMAEADIVIEAVFEELGLKKEVFARIDGIARPG 402
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF G
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMG 521
>gi|326429421|gb|EGD74991.1| trifunctional enzyme subunit alpha [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 275/547 (50%), Gaps = 29/547 (5%)
Query: 6 VTMEVGNDGVAIIT--LINPPVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGRFS 62
V E+ +DG+AI+T L VN L + + K S V+A ++++G F
Sbjct: 31 VRYEIEDDGIAIVTFDLQGTKVNTLNMDLADEFKGVMSTLESDPKVRAAVIMSGKEDNFI 90
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DIN+F K A ++ + S + L KP VAA+ G LGGGLELA+ CH
Sbjct: 91 AGADINMFTKCKTAEEMENLSRPSHAMFDQLASG--KPKVAAINGSCLGGGLELALACHY 148
Query: 123 RIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
R+A+ PKT LGLPE+ LG++PG GGTQRLP L+GL A+ +ML K++ + ++ L+
Sbjct: 149 RVASSSPKTVLGLPEVMLGILPGAGGTQRLPALIGLQNAMPLMLTGKNVKPSKAKRMKLV 208
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
D V L + L A +A R KL +++ E + R A K A +
Sbjct: 209 DNVADPSALKHAAVLAAKGLADGTLKVDREPKGVQKL--INKVIEGTEFGRNFAFKKARD 266
Query: 241 MPQHQA---------CLDVIEEGIVHGGYS--GVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
M Q +DV+E HG S G EAK F EL M SR LV ++F Q
Sbjct: 267 MVMKQTKGVYPAPLKIIDVLETSAKHGFCSKAGYEAEAKAFGELGMTPESRALVSIYFGQ 326
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349
A K P G R V V+G GLMG+GIA + + ++LK+ E L +G+
Sbjct: 327 TACKKNP----YGKPKRKENTVGVLGAGLMGAGIAEVTMTKGVDILLKDAKPEGLARGLD 382
Query: 350 TIEANVRGLVTRGKLTQDKANNALKMLKGVLD-----YSEFKDVDMVIEAVIESVPLKQK 404
I N+ + ++T + + + + G+ D F DM+IEAV E++ LK K
Sbjct: 383 QIYKNLNKKTKKRRMTTFERDQTMSRIVGLTDSDANWQKHFSHADMIIEAVFENLELKHK 442
Query: 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464
I + E P HC+ ATNTS I + + E +S ++ IG H+FSP MPLLEI+R T
Sbjct: 443 IIKQFEAITPAHCVFATNTSAIPITKLAEASSRPEQFIGMHYFSPVDKMPLLEIIRHPGT 502
Query: 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 524
S + +G K +VV + GF VNR PYS A ++ G + ID A+
Sbjct: 503 SDETTARAYDMGLKQGKTVIVVKDVPGFYVNRCLGPYSDEAMAVLLDGASIEEIDRAMVK 562
Query: 525 FGLPIGP 531
+G P+GP
Sbjct: 563 YGYPVGP 569
>gi|26248728|ref|NP_754768.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CFT073]
gi|227887400|ref|ZP_04005205.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
gi|300983688|ref|ZP_07176700.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
45-1]
gi|386630138|ref|YP_006149858.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i2']
gi|386635058|ref|YP_006154777.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i14']
gi|386639910|ref|YP_006106708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
83972]
gi|422364998|ref|ZP_16445502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
153-1]
gi|432412549|ref|ZP_19655212.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
gi|432432626|ref|ZP_19675054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE187]
gi|432437109|ref|ZP_19679497.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE188]
gi|432457447|ref|ZP_19699630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE201]
gi|432496445|ref|ZP_19738241.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE214]
gi|432505186|ref|ZP_19746909.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE220]
gi|432524581|ref|ZP_19761709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE230]
gi|432569418|ref|ZP_19805929.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
gi|432593603|ref|ZP_19829919.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
gi|432608272|ref|ZP_19844456.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
gi|432651912|ref|ZP_19887665.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
gi|432784303|ref|ZP_20018482.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
gi|432845340|ref|ZP_20078140.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE141]
gi|432974487|ref|ZP_20163325.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE209]
gi|432996092|ref|ZP_20184678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE218]
gi|433000661|ref|ZP_20189186.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE223]
gi|433058857|ref|ZP_20245903.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE124]
gi|433088018|ref|ZP_20274389.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE137]
gi|433116272|ref|ZP_20302063.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE153]
gi|433125941|ref|ZP_20311499.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE160]
gi|433140011|ref|ZP_20325266.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE167]
gi|433149927|ref|ZP_20334948.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE174]
gi|433208511|ref|ZP_20392185.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
gi|433213294|ref|ZP_20396884.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
gi|442608119|ref|ZP_21022879.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
gi|81475439|sp|Q8FFG4.1|FADJ_ECOL6 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|26109134|gb|AAN81336.1|AE016764_18 Putative fatty oxidation complex alpha subunit [Escherichia coli
CFT073]
gi|47600725|emb|CAE55846.1| putative fatty acid oxidation complex alpha subunit [Escherichia
coli Nissle 1917]
gi|227835750|gb|EEJ46216.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
gi|300408483|gb|EFJ92021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
45-1]
gi|307554402|gb|ADN47177.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
83972]
gi|315292298|gb|EFU51650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
153-1]
gi|355421037|gb|AER85234.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i2']
gi|355425957|gb|AER90153.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i14']
gi|430934956|gb|ELC55303.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
gi|430952367|gb|ELC71432.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE187]
gi|430962440|gb|ELC80297.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE188]
gi|430981740|gb|ELC98463.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE201]
gi|431023703|gb|ELD36898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE214]
gi|431037536|gb|ELD48512.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE220]
gi|431051697|gb|ELD61360.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE230]
gi|431099194|gb|ELE04493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
gi|431127201|gb|ELE29510.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
gi|431137216|gb|ELE39063.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
gi|431189767|gb|ELE89184.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
gi|431328726|gb|ELG16030.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
gi|431394196|gb|ELG77732.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE141]
gi|431488574|gb|ELH68206.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE209]
gi|431505122|gb|ELH83744.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE218]
gi|431508647|gb|ELH86919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE223]
gi|431569112|gb|ELI42074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE124]
gi|431604529|gb|ELI73938.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE137]
gi|431634034|gb|ELJ02296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE153]
gi|431644591|gb|ELJ12252.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE160]
gi|431659591|gb|ELJ26483.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE167]
gi|431670596|gb|ELJ36949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE174]
gi|431729796|gb|ELJ93415.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
gi|431734319|gb|ELJ97720.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
gi|441710724|emb|CCQ08856.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
Length = 714
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|301049101|ref|ZP_07196084.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
185-1]
gi|300299102|gb|EFJ55487.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
185-1]
Length = 714
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVRLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|410086602|ref|ZP_11283310.1| Enoyl-CoA hydratase [Morganella morganii SC01]
gi|409766822|gb|EKN50910.1| Enoyl-CoA hydratase [Morganella morganii SC01]
Length = 717
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 288/535 (53%), Gaps = 11/535 (2%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A+V+ +G
Sbjct: 10 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 70 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H+R+ + KT+LGLPE+ LG++PG GGTQRLP L+GL A++MML + + +++ K+
Sbjct: 129 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK-T 237
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q ++ +
Sbjct: 189 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVRRRS 246
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 247 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 304
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ G+KP + VAV+GGGLMG+GIAT + V +K+V+ E K + ++
Sbjct: 305 -SADGVKPAELHHVAVLGGGLMGAGIATITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 363
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 364 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 423
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + K S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 424 TIFASNTSSLPIRDIAAKASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 483
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP
Sbjct: 484 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGP 538
>gi|387903389|ref|YP_006333728.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387578281|gb|AFJ86997.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 711
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 279/524 (53%), Gaps = 15/524 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + ++T+ +PPVNAL+ + GL D + A + V+A+++ G G F G DI F
Sbjct: 20 RDALLVVTIDHPPVNALSADVRRGLADALDAAQADHAVRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLALPGA 129
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+TLG++PG GGTQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEARALGLVDRVARSDQT 189
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
L +A ++ + P +R L + A+ L AR + K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAP-VRRTRDAQGLAERTAAQAALAAARAELPKKSRGLFSPAKIVD 248
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+E + +G+ E +F + + GLVH FFA+R +K P R V
Sbjct: 249 AVEAALTLSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASA--RAVE 306
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+V V+GGG MG+GIA A + + V + E + L +G +E LV +G++T D
Sbjct: 307 RVGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGRAHVEKVYDALVAKGRMTPDAR 366
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ G Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARVARFDGSTRYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ +IG HFFSPA+VM LLEIV +R SA+V+ + + +KK PV G C
Sbjct: 427 ALAAGIDRPADVIGLHFFSPANVMKLLEIVVPKRVSAEVVATAFALARQLKKTPVRAGVC 486
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y +A L+ G ++ID A+R FG P+GPFQ
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRDFGFPMGPFQ 530
>gi|333899497|ref|YP_004473370.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
gi|333114762|gb|AEF21276.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
Length = 692
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 270/528 (51%), Gaps = 33/528 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
+A++ + NPPVNAL+ + L + A + V A+V+ G F G DI F
Sbjct: 13 IALLLIDNPPVNALSRQVREQLLECLHAALGDEAVTALVIACEGKTFVAGADIKEFDLPL 72
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
Q H +PDV + LIE+ KP+VAA++G A GGGLELA+ CH RIA Q
Sbjct: 73 QAPH-------LPDV-----LALIENAAKPVVAALQGSAFGGGLELALACHYRIAEGGAQ 120
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
LPE++LG+IPG GGTQRLPRL G+ A+++++ + + +E + GLID L
Sbjct: 121 FALPEVSLGLIPGAGGTQRLPRLCGMQVALDLVVGGERVGAERALRFGLIDK-------L 173
Query: 191 KVSRLWALDIAARR----KPWIRSLHRTDKLGSLSEARE-VLKLARLQAKKTAPNMPQHQ 245
V L A IA R +P R R + RE +L R + AP +
Sbjct: 174 MVDGLRAGAIALAREVSGQPPRRVSERQVPEYEPAAFRERATQLLRKLPGQEAPPL---- 229
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L +E+ +G+ E +VF + L HVFFA+R + V
Sbjct: 230 -ALQALEQASRLSFEAGMAHEREVFIARRQSRQAHALRHVFFAERDLASRARVLGKRAPT 288
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + VAVIG G+MGSGIA I +L + + L +G +E +GLV +GKL
Sbjct: 289 RPIEAVAVIGAGMMGSGIALCLANAGIATLLVDTQEQALQRGRSVVEGYFQGLVEKGKLD 348
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D+A +++ D++IEAV E + +KQ +F +L++ P ILATNTS
Sbjct: 349 ADEAARRTSLIRYDATLESVAGADLIIEAVFEDLAVKQDVFRQLDQFAKPGAILATNTSY 408
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D+ + T+ ++G HFFSPA VM LLE+VRT + + +V+ ++ +G + K +
Sbjct: 409 LDVTAIASATARPSDVVGMHFFSPAQVMKLLEVVRTPQVAPEVLASVLQLGARLGKTSIA 468
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNC GF NR + A L+ G +D IR FG P+GPF+
Sbjct: 469 VGNCYGFVGNRLLAVREREAGFLLEEGASPQDVDRVIRGFGFPMGPFE 516
>gi|432373014|ref|ZP_19616053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
gi|430895436|gb|ELC17699.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
Length = 714
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 285/534 (53%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGERMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 ICTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R+L +++ G L A + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGPLGRALLFKMAGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D+ P + G G TA + V +K++N++ + +K + G V
Sbjct: 302 DVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDINAQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G +DY F D++IEAV E++ LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLALISGSMDYHGFSHRDLIIEAVFENLELKQQMVAEVEQNCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + S ++IG HFFSP MPL+EI+ TSAQ + + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTLATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|430005907|emb|CCF21710.1| Peroxisomal bifunctional enzyme [Includes: Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase ;
3-hydroxyacyl-CoA dehydrogenase] [Rhizobium sp.]
Length = 658
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 279/524 (53%), Gaps = 24/524 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGV ++T+ NPPVNAL+ + AGL + A + +++TG G F GG DI F
Sbjct: 17 HDGVLVVTIDNPPVNALSADVRAGLVAALDRAGGDAGILGLLITGAGKTFIGGADIREF- 75
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P++ V+ IE KP VAA+ G ALGGGLE+A+GCH R+A+ TQ+
Sbjct: 76 -----GQPPAEPNLPT--VIERIEHSAKPTVAAINGAALGGGLEVALGCHYRVASSATQM 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRL+G+ +I+++ +S+ ++E +LGLID + +
Sbjct: 129 GLPEVKLGIVPGAGGTQRLPRLIGIPASIDLIGSGRSVKAKEAHELGLIDEIADAG---- 184
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLG---SLSEAREVLKLARLQAKKTAPNMPQHQACL 248
L +AA R+ + RT +L + S A E K R+ AK P L
Sbjct: 185 ---LQEAALAAVRRNTGQDPRRTGQLAVPATDSAAVEKAK-TRILAKARGQQAPAQAVRL 240
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
E G+ E F +L + L HVFF +R SKV ++ G+ PR V
Sbjct: 241 ---VEAAARPLAEGMADERATFLKLRESSEAAALRHVFFGERQASKVEDLE--GVSPRPV 295
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
+ ++G GLMGSGIA A + V+ + + E +G + I ++ ++ ++ Q
Sbjct: 296 ETIGIVGLGLMGSGIAVAALAAGYRVIGLDRDDEAAARGGERILGLLQKNLSARRIDQTA 355
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ L ++ D+VIEAV + + +K +F L+K P ILATNTS ++
Sbjct: 356 FDAQETRLSVTAADADLALCDLVIEAVFDDLGVKIDLFRRLDKVIRPDAILATNTSYLNP 415
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T+ +R++G HFFSPAHVM LLE+VR RT+ V+ + V K ++K+ +V G
Sbjct: 416 DEIAAATAHPERVLGLHFFSPAHVMRLLEVVRCARTAPDVLATGLAVAKRLRKLAIVTGV 475
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF N F Y + A L+ G ID+A+ +G P+G F
Sbjct: 476 TEGFIGNSIFSAYRREAEFLLEDGALPHEIDAALEDYGFPMGLF 519
>gi|430002113|emb|CCF17893.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhizobium sp.]
Length = 688
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 278/527 (52%), Gaps = 30/527 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++ + NPPVNA + + L + EA + + +VL G G F G D+ F
Sbjct: 10 DDDIAVLIIDNPPVNAGSSDVRKALLARIAEAEADTTLVGVVLIGAGKSFIAGSDLREF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
++ L P + V+ IE KP VAA+ G ALGGG ELA+GC ARIAAP+T +
Sbjct: 69 ------NLPLEPP-QLPQVIEAIEGSSKPYVAALHGAALGGGYELALGCDARIAAPETVV 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT---SEE 188
GLPE TLG+IPG GGTQ+LPRLVG +KAI ++ ++S E LG+IDAV EE
Sbjct: 122 GLPECTLGIIPGAGGTQKLPRLVGKAKAISLICTGARVSSPEALLLGMIDAVADLDLCEE 181
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ ++R +A R++ R +L E E ++ A +A N QA +
Sbjct: 182 AVALAR----SLAGRKQ-------RVIELPVPEEKPEDIEAATSKALAAGRNRSHIQAAI 230
Query: 249 -DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGLKP 305
V+ G V G G+ E F++L + ++ L H+FFA+R ++ +P G+K
Sbjct: 231 RHVMAAGTV-GAREGLAAERAEFQQLRVASEAKALRHIFFAEREATRGNLP----AGVKG 285
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++G G MG+ IATA + VL + N E L + I A + VT GKL+
Sbjct: 286 RRFESFGIVGAGTMGADIATATLQRGFPTVLVDSNKEALARAKARITAAIDKGVTSGKLS 345
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
D + A L + +D D++IEAV E + K+ +F++L+ P +LATNTS
Sbjct: 346 ADAGDRAKANLVLASELQSLEDCDVLIEAVFEDLETKRSVFAKLDTIARPCALLATNTSY 405
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + T+ +IG HFFSPAH+M LLE+V +S + + + + K + K V
Sbjct: 406 LDIDGIAAATTRPKDVIGLHFFSPAHIMKLLEVVAGAESSHEAVATGLAIAKSLGKQAVQ 465
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
N GF NR + Y + ++ G +D A++ FG +GPF
Sbjct: 466 ASNGFGFIGNRIYAAYRAACEFMLEDGALPHEVDEALKDFGFAMGPF 512
>gi|366160263|ref|ZP_09460125.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. TW09308]
Length = 714
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 285/534 (53%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGERMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 ICTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R+L +++ G L A + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGPLGRALLFKMAGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D+ P + G G TA + V +K++N++ + +K + G V
Sbjct: 302 DVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDINAQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G +DY F D++IEAV E++ LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLVLISGSMDYHGFSHRDLIIEAVFENLELKQQMVAEVEQNCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + S ++IG HFFSP MPL+EI+ TSAQ + + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTLATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|77165210|ref|YP_343735.1| multifunctional fatty acid oxidation complex subunit alpha
[Nitrosococcus oceani ATCC 19707]
gi|254433896|ref|ZP_05047404.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
gi|76883524|gb|ABA58205.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Nitrosococcus oceani ATCC 19707]
gi|207090229|gb|EDZ67500.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
Length = 744
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 296/550 (53%), Gaps = 26/550 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+E D AII L P VN L E+ ++ D++ +VL F G
Sbjct: 11 IEKREDNAAIIWLDVPDVSVNTLQADFAQDFNRVLEQLSADKDLEVVVLASAKEDFIAGA 70
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI + ++ A + + + + ++ +E PIVAA+ G+ LGGGLE+A+ C R+A
Sbjct: 71 DIKMLTQLPDA-EAARQLSRTAQQAMDQLEAFPLPIVAAIHGVCLGGGLEVALACRGRVA 129
Query: 126 --APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ +T+LG PE+ LGVIPG GGTQRLPRLVGL A+ M+L K+ + + LGL+D V
Sbjct: 130 TNSARTRLGQPEVKLGVIPGVGGTQRLPRLVGLETALNMILTGKTHPASKACALGLVDEV 189
Query: 184 VTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKL-GSLSEAREVLKL----------- 229
V LL+ + A ++ ++P + + ++ GS+ R+V L
Sbjct: 190 VPRPVLLEAALARARELVQENNKEPEAGTFQQVSRIFGSMLSLRKVRSLLLEKNSLGRSM 249
Query: 230 ARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 284
QAKK T N+P L+VI+ G+ G +G E + F +L + +R L+
Sbjct: 250 VFNQAKKKVLSHTHGNLPAPLQALEVIKTGMEQGLEAGFKAEVEAFGDLAVSTKARNLMA 309
Query: 285 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEY 343
+F A+ A K P TD + PR VRKV V+G GLMGSGIA + V LK++ E
Sbjct: 310 LFLAKSALKKDPG-TDEEIAPRLVRKVGVLGAGLMGSGIAYVTAAKARLPVRLKDLKQEV 368
Query: 344 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 403
L +G++T+ V V + ++T + + L +++ +Y+ FK D+VIEAV+E + +KQ
Sbjct: 369 LRQGLRTLWNAVTEQVKKRRMTAGEGDRVLALVRPTTEYTGFKQADVVIEAVVEDLKVKQ 428
Query: 404 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463
++ E+E P I A+NTS+I ++ + E + + ++G H+FSP +PLLE++ TE+
Sbjct: 429 QVLREVEAHGGPEMIFASNTSSIPIHKIAEASDRPEAVVGMHYFSPVPKVPLLEVIVTEK 488
Query: 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 523
T +V+ + +GK K +VV + GF R PY A L++ GV + ID A+
Sbjct: 489 TVPEVVATCVALGKQQNKTVIVVRDGAGFYTTRILAPYINEATHLLAEGVSIQDIDKALV 548
Query: 524 SFGLPIGPFQ 533
+FG P+GP +
Sbjct: 549 NFGFPVGPLK 558
>gi|334145451|ref|YP_004538661.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333937335|emb|CCA90694.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Novosphingobium sp.
PP1Y]
Length = 671
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 279/523 (53%), Gaps = 17/523 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++GV I++ +PPVNAL + AGL + V+AI+ G F G DI F
Sbjct: 10 HNGVLIVSCDSPPVNALGAGVRAGLLEGLTLGLDDPGVEAIIFACAGRTFFAGADIAEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M S+ +V I++ KP++AA+ G ALGGG ELA+ CH R+A ++
Sbjct: 70 KP--------MKTPSLSDLVVCIDNAHKPVIAAIHGTALGGGCELALACHYRVATRSAKI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPRLVG++ A+EM L + +++ +GL+DAV L++
Sbjct: 122 GLPEVRLGLVPGAGGTQRLPRLVGIAMALEMAALGEPMSAARAKDIGLVDAVTADGALVE 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A +A R++P L R + + + + + A++ A + + I
Sbjct: 182 HALGLARTVA-RQRP----LPRVSEQRVVPDPEAIAQFRHTHARRIA-GLHASTMAITCI 235
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 310
E+ G+ E F L+ S HVFFA+R +++ + +DI R V +
Sbjct: 236 EKAAELPFAEGLAFERATFMRLMADPRSAAQRHVFFAERQAARIDGIGSDIA--ARSVER 293
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
V +IG G MGSGIA + + V L E +++ L +G + I V +G++T +A
Sbjct: 294 VGIIGAGTMGSGIAINFLSAGLAVTLLETSADALKRGQEQIANTFSSNVAKGRMTARQAE 353
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
AL +L LD+ D+VIEAV E++ +K+ IF+ L+ ILA+NTS +DL+
Sbjct: 354 QALALLDVKLDFDALGACDLVIEAVFENMNIKKDIFARLDHVAREGAILASNTSYLDLDE 413
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ TS ++G HFFSPAH+M LLE+VR T+ V++ M + + I KV VV G
Sbjct: 414 IAATTSRPSDVVGLHFFSPAHIMKLLEVVRGNCTAPDVLVTAMALARRIGKVAVVAGVTP 473
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR A L+ G +ID R+FG+P+GPFQ
Sbjct: 474 GFIGNRLLRCRQNEAMNLLLEGATPEQIDCVHRNFGMPMGPFQ 516
>gi|336449981|ref|ZP_08620438.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
gi|336283138|gb|EGN76345.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
Length = 709
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 297/538 (55%), Gaps = 24/538 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
+++V ++G+ IIT+ P +N L + E S D+K +V ++G F
Sbjct: 10 SLDVRDNGIGIITIDVPGESMNTLKSTFADEVAKLMETIESNRDLKGLVFISGKPSSFVA 69
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + + A D + + + + IE K P+VAA+ G ALGGGLELA+ CH R
Sbjct: 70 GADIRMINECETAADAESLARQG-QALFDRIEALKIPVVAAIHGPALGGGLELALACHVR 128
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + PKT LGLPE+ LG++PG GGTQRLPRLVG+ +A+ +ML K + +++ K+GL D
Sbjct: 129 VVSDSPKTVLGLPEVQLGLLPGSGGTQRLPRLVGVQQALTLMLTGKQLRAKQALKMGLAD 188
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP-N 240
+V LL+ + AL + K +L G LS + K AR QA+K A N
Sbjct: 189 EMVPQSILLEAAVEQALKGKRKAKKPKLNLFSKVLEGPLSSI--LYKKAREQAQKKAHGN 246
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P +D + +G+ G +G+ EAK F EL M D S L ++FFA T+++ T
Sbjct: 247 YPAIDKIIDTVAQGMNKGMKAGLAYEAKQFGELAMSDVSYQLRNIFFA---TTEIKKETG 303
Query: 301 I-GLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
G+KP V+K V+GGGLMG GIA I + V LK++N E GIK A L
Sbjct: 304 ADGVKPEAVKKAGVLGGGLMGGGIAHVTISKAKVPVRLKDINQE----GIKNALAYHHKL 359
Query: 359 ----VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
V R + + + ML G +DYS FKD D+VIEAV E + LKQK+ +++EK
Sbjct: 360 LLPKVKRKIIRPTELQQQMLMLTGTVDYSGFKDTDIVIEAVFEDLDLKQKMVADIEKNAA 419
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I ATNTS++ + + K + +++IG H+FSP MPL EI+ E TS + I +
Sbjct: 420 EHTIFATNTSSLPITQIAAKAARPEQVIGLHYFSPVEKMPLAEIITHEGTSKETIATTVE 479
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K K PVVV + GF VNR PY +++ARLL++ G + +D FG P+GP
Sbjct: 480 FAKRQGKTPVVVKDGAGFYVNRILAPYMNEAARLLLA-GEPIEVLDKTFVKFGFPVGP 536
>gi|414170055|ref|ZP_11425669.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
gi|410884727|gb|EKS32547.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
Length = 695
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 294/524 (56%), Gaps = 10/524 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + GL + + A + D VKAIV+ G F G DI F
Sbjct: 10 HDAIAIVTIDSPPVNALSAAVRKGLAEGVKSAQADDSVKAIVIACAGRTFVAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + S+ V+ +IE+ KP+VAA+ G ALGGGLELA+GCH R+A +L
Sbjct: 70 KPPQS--------PSLHEVIEVIENSTKPVVAAIHGTALGGGLELALGCHYRVAVKDAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ + I++++ K GLI+ +V + +
Sbjct: 122 GLPEVKLGLLPGGGGTQRLPRAVGPELAVKMIVGGEPISAQDALKNGLIEEIVDAPPAVG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A I A ++P R KL + R + A A K + + + +
Sbjct: 182 -GESFARKIVAEKRPLRRLRDDDSKLAAAKADRSIFTNAAAAANKRSRGLEAPVTAAEAV 240
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + E ++F +L+ D S+ + FFA+RA +K+ V D G K R V++V
Sbjct: 241 SHSLDQPFDQALKTERELFLKLMNGDQSKAQRYAFFAERAAAKIDGVPD-GTKGREVKQV 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + I V + E+ E L +G+ ++ N RG + D
Sbjct: 300 AVIGAGTMGGGIAMSFANAGIPVTIIEMADEPLKRGLGIMQKNYEATAARGGIPADAPAK 359
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++KG + KD D++IEAV E++ +K+++F++L++ P +LA+NTS +D+N +
Sbjct: 360 RMGLIKGAVGLENVKDADLIIEAVFETMEIKKEVFTKLDQFAKPGAVLASNTSYLDINKI 419
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR +T+ ++ + + K I KVPVVVG C G
Sbjct: 420 ADVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALVTAVNIAKKIAKVPVVVGVCDG 479
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR S+ + + G ++D+ + FG+P+GPF G
Sbjct: 480 FVGNRMLAARSKQSEKFLFEGALPQQVDAVVTKFGMPMGPFAMG 523
>gi|449663039|ref|XP_002158828.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Hydra magnipapillata]
Length = 767
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 294/549 (53%), Gaps = 39/549 (7%)
Query: 13 DGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA++T+ N VN L+ ++ F+E T +V ++VL +G F G DIN+
Sbjct: 49 DNVAVVTINDKNSKVNVLSQNVIEETVQVFKEVTHNPNVSSVVLISGKPDCFIAGADINM 108
Query: 70 FQKVHGAGDVSLMPDVSVE--LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA-- 125
++ A + +SVE ++N+I D KKP+VAA+ G LGGGLE+A+ CH RIA
Sbjct: 109 ---LNTANSLEKGTAISVEGQKIMNMIFDSKKPVVAAINGSCLGGGLEVALACHYRIAVD 165
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV- 184
+PKT LG+PE+ LG++PG GGTQRLPRLVGL +++MML K++ + + KLGL+ +VV
Sbjct: 166 SPKTGLGVPEVMLGLLPGAGGTQRLPRLVGLPTSLDMMLTGKTVNATKAKKLGLVHSVVD 225
Query: 185 ------------TSEELLKVSRLWALDIAA------RRKPW--IRSLHRTDKLGSLSEAR 224
T L +V+ A D+A+ + KPW + L L S R
Sbjct: 226 QLGPGVSDSKANTMRLLEEVAVKAAKDLASGKLQVSQSKPWFSLAGLQHNIPL-SFGPLR 284
Query: 225 E-VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 282
+ V K A+ KKT P L + G+ +G +E++ F EL ++ L
Sbjct: 285 DYVFKKAKETVMKKTLGLYPAPLKILKATQTGLEKNIEAGFKEESQGFGELTQSKEAKSL 344
Query: 283 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNS 341
+ +F Q K G V+ VAV+G GLMG+GIA I + V+LK+ +
Sbjct: 345 MGLFNGQTECKK----NRFGAPKHKVQHVAVLGAGLMGAGIAEVSINKAHHNVILKDTTT 400
Query: 342 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 401
+ L +GI I N+ ++ ++T + + + L+ LDYS F + DMVIEAV E + +
Sbjct: 401 DGLSRGIDQIYKNINLRASKRQITTFERDVIMSKLQTQLDYSNFSEADMVIEAVFEDIKV 460
Query: 402 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 461
K K+ E+EK P HC+ A+NTS I + + + + +IG H+FSP MPLLEI+ T
Sbjct: 461 KHKVLQEVEKVIPEHCVFASNTSAIPIAEIASVSKRPENVIGMHYFSPVDKMPLLEIITT 520
Query: 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 521
E+TS + I + VG K +VV + GF R P A L+S G++ +D
Sbjct: 521 EKTSKETIASAVDVGLKQGKTVIVVKDGPGFYTTRILMPTLMEALQLLSEGINPRDLDQR 580
Query: 522 IRSFGLPIG 530
++FG P+G
Sbjct: 581 SKNFGFPVG 589
>gi|15802887|ref|NP_288914.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EDL933]
gi|15832478|ref|NP_311251.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. Sakai]
gi|168761215|ref|ZP_02786222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4501]
gi|217327205|ref|ZP_03443288.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. TW14588]
gi|387883556|ref|YP_006313858.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli Xuzhou21]
gi|419046263|ref|ZP_13593200.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3A]
gi|419052061|ref|ZP_13598933.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3B]
gi|419058092|ref|ZP_13604897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3C]
gi|419063565|ref|ZP_13610293.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3D]
gi|419110368|ref|ZP_13655426.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4F]
gi|420293300|ref|ZP_14795423.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW11039]
gi|421819151|ref|ZP_16254649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0821]
gi|421831882|ref|ZP_16267169.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
gi|423725942|ref|ZP_17700048.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
gi|424122899|ref|ZP_17856245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
gi|424141894|ref|ZP_17873805.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
gi|424148394|ref|ZP_17879778.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
gi|424456780|ref|ZP_17907939.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
gi|424476069|ref|ZP_17925411.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
gi|424527109|ref|ZP_17970834.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4421]
gi|424533262|ref|ZP_17976621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4422]
gi|425099007|ref|ZP_18501748.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4870]
gi|425110981|ref|ZP_18512916.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
6.0172]
gi|425126925|ref|ZP_18528120.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0586]
gi|425163374|ref|ZP_18562269.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA506]
gi|425169110|ref|ZP_18567594.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA507]
gi|425175176|ref|ZP_18573305.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA504]
gi|425187471|ref|ZP_18584754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1997]
gi|425212862|ref|ZP_18608272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
gi|425218982|ref|ZP_18613959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
gi|425225534|ref|ZP_18620011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
gi|425231799|ref|ZP_18625848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
gi|425237715|ref|ZP_18631444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TT12B]
gi|425411929|ref|ZP_18793720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE098]
gi|425429592|ref|ZP_18810217.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1304]
gi|428954061|ref|ZP_19025876.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1042]
gi|428959997|ref|ZP_19031331.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
89.0511]
gi|428978845|ref|ZP_19048687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.2281]
gi|428984647|ref|ZP_19054058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0055]
gi|428990818|ref|ZP_19059824.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0056]
gi|428996622|ref|ZP_19065250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
94.0618]
gi|429009002|ref|ZP_19076544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.1288]
gi|429015507|ref|ZP_19082415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0943]
gi|429021455|ref|ZP_19087992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0428]
gi|429027410|ref|ZP_19093442.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0427]
gi|429045597|ref|ZP_19110327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0107]
gi|429051018|ref|ZP_19115595.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0003]
gi|429061895|ref|ZP_19125930.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0007]
gi|429827303|ref|ZP_19358378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0109]
gi|429833630|ref|ZP_19364022.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0010]
gi|444959192|ref|ZP_21277057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1753]
gi|444964408|ref|ZP_21282028.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1775]
gi|444986403|ref|ZP_21303195.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
gi|445029759|ref|ZP_21345446.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1781]
gi|445051672|ref|ZP_21366726.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0083]
gi|445057373|ref|ZP_21372243.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0670]
gi|81765895|sp|Q8XCP2.1|FADJ_ECO57 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|12516705|gb|AAG57469.1|AE005465_9 putative enzyme [Escherichia coli O157:H7 str. EDL933]
gi|13362694|dbj|BAB36647.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
gi|189368241|gb|EDU86657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4501]
gi|209764650|gb|ACI80637.1| putative enzyme [Escherichia coli]
gi|217319572|gb|EEC27997.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. TW14588]
gi|377893093|gb|EHU57532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3A]
gi|377893746|gb|EHU58180.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3B]
gi|377904679|gb|EHU68957.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3C]
gi|377910040|gb|EHU74238.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3D]
gi|377957250|gb|EHV20786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4F]
gi|386797014|gb|AFJ30048.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli Xuzhou21]
gi|390680876|gb|EIN56691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
gi|390700514|gb|EIN74815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
gi|390701304|gb|EIN75531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
gi|390742582|gb|EIO13581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
gi|390745511|gb|EIO16306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
gi|390769402|gb|EIO38337.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
gi|390797386|gb|EIO64642.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW11039]
gi|390850491|gb|EIP13866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4421]
gi|390861187|gb|EIP23463.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4422]
gi|408064254|gb|EKG98736.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
gi|408078962|gb|EKH13090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA506]
gi|408082791|gb|EKH16751.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA507]
gi|408091185|gb|EKH24419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA504]
gi|408104353|gb|EKH36675.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1997]
gi|408127401|gb|EKH57891.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
gi|408137795|gb|EKH67490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
gi|408139875|gb|EKH69467.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
gi|408146200|gb|EKH75343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
gi|408155264|gb|EKH83590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TT12B]
gi|408326798|gb|EKJ42567.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE098]
gi|408346333|gb|EKJ60629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1304]
gi|408549874|gb|EKK27226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4870]
gi|408551231|gb|EKK28518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
6.0172]
gi|408569904|gb|EKK45889.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0586]
gi|408612908|gb|EKK86242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0821]
gi|427205210|gb|EKV75470.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1042]
gi|427207586|gb|EKV77755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
89.0511]
gi|427224319|gb|EKV93029.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.2281]
gi|427242113|gb|EKW09531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0056]
gi|427242613|gb|EKW10016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0055]
gi|427246204|gb|EKW13424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
94.0618]
gi|427261315|gb|EKW27252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0943]
gi|427264802|gb|EKW30441.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.1288]
gi|427276418|gb|EKW40991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0428]
gi|427279374|gb|EKW43791.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0427]
gi|427299292|gb|EKW62267.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0107]
gi|427300622|gb|EKW63553.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0003]
gi|427315581|gb|EKW77572.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0007]
gi|429253891|gb|EKY38343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0109]
gi|429255673|gb|EKY39977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0010]
gi|444573142|gb|ELV49533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1753]
gi|444577243|gb|ELV53387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1775]
gi|444593577|gb|ELV68786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
gi|444641747|gb|ELW14970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1781]
gi|444664142|gb|ELW36332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0083]
gi|444670122|gb|ELW42056.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0670]
Length = 714
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>gi|328544778|ref|YP_004304887.1| hypothetical protein SL003B_3161 [Polymorphum gilvum SL003B-26A1]
gi|326414520|gb|ADZ71583.1| Putative trifunctional protein [Polymorphum gilvum SL003B-26A1]
Length = 691
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 271/521 (52%), Gaps = 29/521 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ PPVNA + + +K F E + VLTG GG F GG DI F
Sbjct: 23 IAVVTIDFPPVNAGSKAMREAVKAAFVEIGVDGTLAGAVLTGAGGNFVGGADIREF---- 78
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D P E V+ IE C P+VAA++G ALGGG ELA+GC AR+A PK +GLP
Sbjct: 79 ---DAPAQPPHLPE-VIAAIEACPFPVVAAIDGAALGGGYELALGCDARVATPKAVVGLP 134
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-LKVS 193
E+TLG+IPG GGT RL RLV ++AIE++ + + + E LGL+DAV + + V+
Sbjct: 135 EVTLGLIPGAGGTLRLSRLVDEARAIELVTSGRRVKAAEALDLGLVDAVANGDLIEAAVT 194
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
L L RR R + S + A ++ A +A K A + I +
Sbjct: 195 HLATLGGQKRR-------LRDQPVVSCAPA--AVERAATEATKKGRGAEAVAAAITAIRD 245
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ + +E + L S+ L H+FFA++A K+P G P VR V V
Sbjct: 246 SVTLPVDEALARERETSLRLRREPQSQALRHLFFAEKAAMKLPE----GATPLSVRTVGV 301
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
+G G MG GI A V L E + L G+ I L G++ +A
Sbjct: 302 VGAGRMGQGIVLAFARRGFTVHLAERDPSVLAAGLSAIGETAASLEAEGRIP-----SAA 356
Query: 374 KMLKGVL--DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+++ VL D D D+V+EA+ E + K+ +F EL+K P ILATNTS +D+N +
Sbjct: 357 ALMETVLGGDVPAMADCDLVVEAIFEDMDAKKALFGELDKLLPETAILATNTSYLDINEI 416
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T+ +R+ G HFF+PAHVM L+E+VR +RTS + + L+ VG+ I K+PVV G
Sbjct: 417 AAATARPERVGGLHFFNPAHVMRLIEVVRADRTSLETLSTLLDVGRRIGKLPVVARVGEG 476
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR F Y + L+ G +D A+R+FG+ +GPF
Sbjct: 477 FIGNRIFAAYREQCEFLIEEGAYPQDVDRAMRAFGMAMGPF 517
>gi|331673841|ref|ZP_08374604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA280]
gi|331069114|gb|EGI40506.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA280]
Length = 714
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|146312523|ref|YP_001177597.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. 638]
gi|166972671|sp|A4WCW6.1|FADJ_ENT38 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|145319399|gb|ABP61546.1| 3-hydroxyacyl-CoA dehydrogenase [Enterobacter sp. 638]
Length = 715
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 284/534 (53%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L ++ ++ +++ ++ ++ F
Sbjct: 8 TLNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARAKSAQEAEELARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + K+GL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL A+++A + + R L +++ G L A ++ + +KT
Sbjct: 187 EVVPHSILLTA----AVELAQKERQASRHLPVRERILAGPLGRALLFNRVGKKTEQKTKG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++ P V G G TA + V +K++N++ + ++ + V
Sbjct: 302 EVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDINAKGINHALQYSWQLLDQKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + AL ++ G +D+S FK D+VIEAV E + LKQ++ +++E+ C PH I
Sbjct: 361 KRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDLQLKQQMVADVEQYCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ E TSAQ + ++ + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHESTSAQTVATVVKLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G V +D A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVDDALVKFGFPVGPIQ 534
>gi|432750812|ref|ZP_19985416.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
gi|431296794|gb|ELF86505.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
Length = 714
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|424078379|ref|ZP_17815381.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA505]
gi|424110797|ref|ZP_17845053.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93-001]
gi|424450586|ref|ZP_17902307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
gi|425418333|ref|ZP_18799615.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK523]
gi|429079301|ref|ZP_19142447.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0713]
gi|390643971|gb|EIN23277.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA505]
gi|390660468|gb|EIN38171.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93-001]
gi|390742848|gb|EIO13838.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
gi|408336302|gb|EKJ51089.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK523]
gi|427329287|gb|EKW90618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0713]
Length = 712
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 532
>gi|226228262|ref|YP_002762368.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
gi|226091453|dbj|BAH39898.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
Length = 737
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 285/539 (52%), Gaps = 27/539 (5%)
Query: 12 NDGVAIITLINP--PVNALAI---PIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++G+A+I P PVN L P+ + E+ + V A++++G + G D
Sbjct: 36 HEGIALIAYDQPGSPVNTLNSRVGPVFEQFFLRIEQDAA--IVAAVLVSGKTDSWIAGAD 93
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I Q++ D + S +L+++ + +KP++AA+ G ALGGGLE+A+ CH RI
Sbjct: 94 IEELQRITAPVDGERL-SRSGQLLLDRLAALRKPVIAAIHGAALGGGLEVALACHHRIIT 152
Query: 127 --PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
KT L LPE+ LG+IPG GGTQRLPR VGL A++++L K++ + + +GL+ +V
Sbjct: 153 DHAKTVLALPEVQLGLIPGAGGTQRLPRTVGLQVALDLILTGKNVRARKALPMGLVHELV 212
Query: 185 TSEELLKVSRLWALDIAARRKPWIRS-----LHRTDKLGSLSEAREVLKLARLQAKKTAP 239
LL V+ A +A + +R + R + S+ A K KKT
Sbjct: 213 HPAILLDVAMQRARQLAHGDRSAVRERRPGLVERALEENSVGRAIIFRKARESVTKKTGG 272
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ P A LDVIE G +G+L+EAK F EL + R L ++FFA + K
Sbjct: 273 HYPAPFAALDVIERGYRESFAAGLLEEAKRFGELAVSPECRQLAYLFFATTSLKK----- 327
Query: 300 DIGL------KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 353
D GL PR V K+ V+G G MG+GI + V LK+ E L G K +
Sbjct: 328 DTGLPAGQNVAPRAVHKLGVLGAGFMGAGITAVAVQAGTVVRLKDGTVERLASGFKAVRD 387
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
VR + + ++T+ + ++ + ++ G +DY F +VD+VIEAV E + +K ++ E+E+
Sbjct: 388 VVRERLVKRQITRVQFDDTMSLVGGTVDYRGFANVDLVIEAVFEDLDVKHQVLREVEETT 447
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
P I A+NTSTI + + ++++G HFFSP H MPLLE++ T TSA+ +
Sbjct: 448 PA-AIFASNTSTIPIRDIARAAKRPEQVLGMHFFSPVHRMPLLEVIVTPETSAETTATAV 506
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GK + K +VV + GF VNR PY +V G + ID A+ FG P+GPF
Sbjct: 507 AYGKQLGKTVIVVQDGAGFYVNRILAPYLNECGRMVDEGASIEDIDKALVQFGFPVGPF 565
>gi|256823193|ref|YP_003147156.1| fatty acid oxidation complex subunit alpha FadJ [Kangiella
koreensis DSM 16069]
gi|256796732|gb|ACV27388.1| fatty acid oxidation complex, alpha subunit FadJ [Kangiella
koreensis DSM 16069]
Length = 715
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 304/559 (54%), Gaps = 43/559 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSR------DDVKA--- 51
M+ +E+ +DG+A+IT I+ P A + LK +F E DD+
Sbjct: 1 MSESIFELEMQDDGIAVIT-IDLPGEAQNV-----LKPEFGEQVGEILEKLSDDISVKGV 54
Query: 52 IVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALG 111
I+ +G G F G DI+V + A + L L E K PIVAA++G LG
Sbjct: 55 IIRSGKEGSFIAGADISVLKSADTAQQAEEIAKTGQRLFAQL-EKFKVPIVAAIDGACLG 113
Query: 112 GGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169
GGLELA+ CH R+ + PK++LGLPE+ LG++PG GGTQRLPRLVG+ A++MML K +
Sbjct: 114 GGLELALACHGRVVSDSPKSKLGLPEVQLGLLPGSGGTQRLPRLVGIPSALDMMLTGKQL 173
Query: 170 TSEEGWKLGLIDAVVTSEELLKVS--RLWAL-DIAARRKPWIRSLHRTDKLGSLSEAREV 226
++ KLGL+D VV + L+K + RL L +++KPW L SL+ +E+
Sbjct: 174 FPKQAKKLGLVDEVVPAANLMKAAYRRLHELRKDRSKKKPWTYYL-------SLAGIKEL 226
Query: 227 L--------KLARLQAKKTAP-----NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 273
L L QA+KT N P ++ +E+G G +G+ EAK F +L
Sbjct: 227 LLEANPLGRNLVFNQARKTVDSKTKGNYPAPHKIIECVEKGYSQGFDAGLAIEAKNFGQL 286
Query: 274 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NI 332
V+ ++ L+ +FFA K V D ++ V KV V+GGGLMGSGIA +
Sbjct: 287 VVTPEAKALISIFFATTELKKDKGV-DGDVEAITVDKVGVLGGGLMGSGIAYVSVDKAGK 345
Query: 333 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 392
V +K+V+++ + + + + R ++ A NA+ L G DY FKD DMVI
Sbjct: 346 QVRVKDVSAKGVNGALNYSWKIISKKMKRRIISPSDARNAMSFLTGSTDYKGFKDCDMVI 405
Query: 393 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 452
EAV E + LK ++ ++E+ C I ATNTS+I ++ + E + ++G H+FSP
Sbjct: 406 EAVFEDLDLKHQMVKDVEENCSEKTIFATNTSSIPISKIAEGAKRPEHVVGLHYFSPVEK 465
Query: 453 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 512
MPLLEI++T++T+ VI + +GK K P+VV + GF VNR PY A +L+S G
Sbjct: 466 MPLLEIIKTDKTADWVIATCVALGKQQGKTPIVVNDGAGFYVNRILAPYVNEAGILLSEG 525
Query: 513 VDVFRIDSAIRSFGLPIGP 531
V + ++D A+ G P+GP
Sbjct: 526 VAIEKLDKAMVKAGFPVGP 544
>gi|293605889|ref|ZP_06688259.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
gi|292815676|gb|EFF74787.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
Length = 707
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 279/522 (53%), Gaps = 10/522 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ + +ITL +PPVNAL+ + L E A + DV+A++L G G F G DI F
Sbjct: 15 DQDILVITLDHPPVNALSADVRRDLAAAIEAAQADADVRAVLLVGAGKNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP+VAA+ G ALGGGLE+A+ H R+A +L
Sbjct: 75 K---PPKPPALPDV-----CNQIEASTKPVVAALHGAALGGGLEIALAAHYRLALASAKL 126
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G + A+++ML K +++E K GL+D + ++ L
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLIGAAAALDLMLTGKHLSAEAALKAGLVDTLAEGDDPLA 186
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + A+ RS + L + A A + +T + ++ +
Sbjct: 187 AGLAYTRQLLAQGAGPRRSRDASAALADKAAALAEAAAAGERVSQTLRGLYSPAKIVEAV 246
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
I G+ E +F + + GLVH FFA+R T+KVP + + KPR + KV
Sbjct: 247 RAAIEQPFDEGLRTERALFLQCLNSPQRAGLVHAFFAERETAKVPELKEA--KPRRLDKV 304
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+GGG MG+GIA A + + VV+ E + L +G + LV G+L+ +
Sbjct: 305 GVVGGGTMGAGIAVAMLDAGLPVVMIEQDEPALERGRARVAQVYDRLVKNGRLSAQDRDA 364
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L L G Y D D+++EAV E + +K +F++L++ P +LATNTS +D+N +
Sbjct: 365 RLARLTGATSYDALDDADLIVEAVFEDMDVKLGVFAQLDRVAKPGAVLATNTSYLDVNRI 424
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T ++G HFFSPA++M LLEIV E T+A + + + ++K PV G C G
Sbjct: 425 ASATRGPADVLGLHFFSPANIMKLLEIVVGEHTAADTVATGFELARRLRKTPVRAGVCDG 484
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR Y Q+A +++ G + ID+A R FG P+GP+Q
Sbjct: 485 FIGNRILAAYRQAADMMMEDGASPYDIDAAAREFGYPMGPYQ 526
>gi|154244865|ref|YP_001415823.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Xanthobacter
autotrophicus Py2]
gi|154158950|gb|ABS66166.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Xanthobacter
autotrophicus Py2]
Length = 686
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 277/529 (52%), Gaps = 39/529 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++T+ NPPVN + + GL+ ++A + + +VLTG G F G D F
Sbjct: 10 DDGVALVTIDNPPVNVTSQAVRQGLQRALDQAEAAGAGR-VVLTGAGKTFIAGADAREFA 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
A +PD+ + IE P+VAA+ G ALGGGLE+A+ C ARIAAP L
Sbjct: 69 ---AAPVEPHLPDI-----IRRIEAFPVPVVAAINGAALGGGLEVALACRARIAAPGATL 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GGTQRLPRLVGL A+ ++ + I + E +GL+DA+ + + +
Sbjct: 121 GLPEVTLGIVPGAGGTQRLPRLVGLEAALSLIGEGRIINAHEAEDIGLMDAI--AADPVT 178
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
V+R + I T L + ++ AR QA K +P +D++
Sbjct: 179 VARTFP----------IPDRPATGALPAPPPDPAGVEAARKQAGKRSPGQIAPLKAIDLV 228
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT--SKVPNVTDIGLKPRGVR 309
+ +G+ E + F L D + L HVFFA+RA TDIG
Sbjct: 229 DASTRQSLDAGLALERETFLTLKTSDQAAALRHVFFAERAAMAQGKGGGTDIG------- 281
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL----VTRGKLT 365
V+GGG MG+GIA A I V L E ++ G+ ANV L V RGK T
Sbjct: 282 SAVVVGGGTMGAGIAYALAGLGIAVALVESDA----AGVGRARANVARLYADAVKRGKTT 337
Query: 366 QDKANNALKMLKGVLD-YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
A + Y D+ IEAV E + +K+++F+ L+ A P ILATNTS
Sbjct: 338 AGAAEAEQATRFSFHEGYGALPPADLAIEAVFEDMGVKREVFTALDAALPESTILATNTS 397
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D+N + E +R +G HFFSPAHVM LLE++R TSA+ + + + +KK+P+
Sbjct: 398 YLDVNRIAEAVRRPERFLGLHFFSPAHVMKLLEVIRARTTSAETLATALRLAARLKKIPI 457
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ G C GF NR Y Q+ +++ G ++D A+R FG+ +GP++
Sbjct: 458 LAGVCDGFIGNRILTRYRQTCDIMLMEGALPAQVDRALRGFGMAMGPYE 506
>gi|335424501|ref|ZP_08553509.1| fatty acid oxidation complex subunit alpha FadJ [Salinisphaera
shabanensis E1L3A]
gi|334888839|gb|EGM27134.1| fatty acid oxidation complex subunit alpha FadJ [Salinisphaera
shabanensis E1L3A]
Length = 751
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 290/556 (52%), Gaps = 38/556 (6%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFE---EATSRD-DVKAIVLTGNG-GRFS 62
+E DG+ ++ P A I A D F+ E D +V +VL N G F
Sbjct: 23 LEKREDGIVVLRFGVP--GARQNTIQADFADAFDHVLETIEHDTEVIGVVLISNKPGSFL 80
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI +F++V AG+V + + + + + P+VAA+EG LGGGLE+A+ C
Sbjct: 81 AGADIGLFEQVKSAGEVEAL-SLRGQAGFSRLSKLHVPVVAAIEGSCLGGGLEMALACDV 139
Query: 123 RIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
RIAA P T LGLPE+ LG++P GGTQRLPRLVG++ +++ML + + + K+GLI
Sbjct: 140 RIAAETPATALGLPEVMLGLLPAAGGTQRLPRLVGIATGLDLMLTGRKLRPAQAKKIGLI 199
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRS--LHRTDK-----LGSLSEA---------R 224
D VV E LL + + IA +R + + R +G L+ A R
Sbjct: 200 DQVVAPEALL-MEAIRQARIAGKRSSTASASLIQRAQGRMRAGVGGLTNAALEDNPAGRR 258
Query: 225 EVLKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 283
+ AR + KT + P + + V+ G G +G EAK F EL M S+ L
Sbjct: 259 VLFDQARKTLRAKTHGHYPAPERIIGVVATGYAQGVKAGFAVEAKAFGELAMGPVSKALR 318
Query: 284 HVFFAQRATSKVPNVTDIG--LKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVN 340
HV+ AT + T +G +KPR V +V V+G GLMG+GIAT + + V LK+V+
Sbjct: 319 HVY---HATESLKKATFVGRNVKPRDVHQVGVLGAGLMGAGIATVTVDKAGLPVRLKDVS 375
Query: 341 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 400
+E L +G++ + A V +T+ A+ L + DYS D+VIEAV E +
Sbjct: 376 NEGLARGMQHVRAFYDKRVHNKAMTRAAADRYLYQVTATTDYSGIGAADIVIEAVFEDLE 435
Query: 401 LKQKIFSELEKACP----PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456
LKQ + +++E A P CI ATNTS++ ++ + + + +IG H+FSP MPLL
Sbjct: 436 LKQAMLADVEAAADAQGNPDCIFATNTSSLPISDIAARAKRPENVIGLHYFSPVEKMPLL 495
Query: 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 516
EI+ T++TS + I + GK K +VV + GF RA PY A L++ G V
Sbjct: 496 EIIATDKTSKETIATAVAFGKAQGKTVIVVRDGPGFYTTRALSPYLNEAARLLAEGASVR 555
Query: 517 RIDSAIRSFGLPIGPF 532
ID A+ +G P+GP
Sbjct: 556 AIDEALVDYGFPVGPL 571
>gi|432793556|ref|ZP_20027640.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
gi|432799514|ref|ZP_20033536.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
gi|431339219|gb|ELG26281.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
gi|431343380|gb|ELG30344.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
Length = 714
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + D++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPDQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|412337904|ref|YP_006966659.1| enoyl-CoA isomerase [Bordetella bronchiseptica 253]
gi|408767738|emb|CCJ52494.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 253]
Length = 694
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 272/521 (52%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|432417818|ref|ZP_19660422.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
gi|430939062|gb|ELC59285.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
Length = 714
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|338972995|ref|ZP_08628365.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233748|gb|EGP08868.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
Length = 695
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 293/524 (55%), Gaps = 10/524 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + G+ + + A + D VKAIV+ G F G DI F
Sbjct: 10 HDAIAIVTIDSPPVNALSAAVRKGIAEGVKSAQADDSVKAIVIACAGRTFVAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + S+ V+ IE+ KP+VAA+ G ALGGGLELA+GCH R+A +L
Sbjct: 70 KPPQS--------PSLHEVIETIENSSKPVVAAIHGTALGGGLELALGCHYRVAVKDAKL 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQRLPR VG A++M++ + I++++ K GLI+ +V + +
Sbjct: 122 GLPEVKLGLLPGGGGTQRLPRAVGPELAVKMIVGGEPISAQDALKNGLIEEIVDAPPAVG 181
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A I A ++P R KL + R + A A K + + + +
Sbjct: 182 -GESFARKIVAEKRPLRRLRDDDSKLAAAKADRSIFTNAAAAANKRSRGLEAPVTAAEAV 240
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
+ + E ++F +L+ D S+ + FFA+RA +K+ V D G K R V++V
Sbjct: 241 SHSLDQPFDQALKTERELFLKLMNGDQSKAQRYAFFAERAAAKIDGVPD-GTKGREVKQV 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
AVIG G MG GIA + I V + E+ E L +G+ ++ N RG + D
Sbjct: 300 AVIGAGTMGGGIAMSFANAGIPVTIIEMADEPLKRGLGIMQKNYEATAARGGIPADAPAK 359
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ ++KG + KD D++IEAV E++ +K+++F++L++ P +LA+NTS +D+N +
Sbjct: 360 RMGLIKGAVGLENVKDADLIIEAVFETMEIKKEVFTKLDQFAKPGAVLASNTSYLDINKI 419
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ T ++G HFFSPA+VM L EIVR +T+ ++ + + K I KVPVVVG C G
Sbjct: 420 ADVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALVTAVNIAKKIAKVPVVVGVCDG 479
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
F NR S+ + + G ++D+ + FG+P+GPF G
Sbjct: 480 FVGNRMLAARSKQSEKFLFEGALPQQVDAVVTKFGMPMGPFAMG 523
>gi|419366162|ref|ZP_13907323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13E]
gi|378212471|gb|EHX72794.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13E]
Length = 712
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|455739751|ref|YP_007506017.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
gi|455421314|gb|AGG31644.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
Length = 716
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 287/535 (53%), Gaps = 11/535 (2%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A+V+ +G
Sbjct: 9 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 68
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 69 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 127
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H+R+ + KT+LGLPE+ LG++PG GGTQRLP L+GL A++MML + + +++ K+
Sbjct: 128 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 187
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKT 237
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q +++
Sbjct: 188 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVHRRS 245
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 246 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 303
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ G+KP + VAV+GGGLMG+GIA + V +K+V+ E K + ++
Sbjct: 304 -SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 362
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 363 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 422
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + + S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 423 TIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 482
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP
Sbjct: 483 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGP 537
>gi|330818421|ref|YP_004362126.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327370814|gb|AEA62170.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 712
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 289/526 (54%), Gaps = 18/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ + PVNAL+ I GL + E A V+A+++ G G F G DI F
Sbjct: 20 RDKVLVVTVDHAPVNALSTEIRRGLLEAIEAAAGDAAVEAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +P+V IED KP+V A+ G LGGGLE+A+ H R+A P L
Sbjct: 80 K---PPQPPALPEV-----CRRIEDSAKPVVVALHGATLGGGLEVALAAHYRLALPGATL 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG++PG GGTQR PRL+G + A+++ML + + +E +LGL+D V S++ L
Sbjct: 132 GLPEVLLGLLPGAGGTQRAPRLIGAAAALDLMLSGRHVGAEAARELGLVDRVAASDDTLA 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+A ++ ++R P +R L + A+ + AR + K + + Q ++ +
Sbjct: 192 EGLAYAQELLSKRAP-VRRTRDAQGLADRAAAQAAIDAARAEVAKRSRGLFSPQRIVEAV 250
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E +V G+ +E ++F E + GL+H FFA+R +++P + G +PR + +V
Sbjct: 251 EAALVLPFDEGMKRERELFVECLDSPQRAGLIHAFFAEREAARLPGAS--GAEPREIARV 308
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MG+GIA A + + V+L E + L +G I LV +G+L+ +
Sbjct: 309 GVIGGGTMGAGIAVAVLDAGLPVILVERDDTALAQGRARIAKVYDALVAKGRLSDAARDE 368
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
+ L G Y +VD+VIEAV E + +KQ +F EL + P +LATNTS +D++ +
Sbjct: 369 RMARLAGSTVYDALAEVDLVIEAVFEDLAVKQAVFEELAQVAKPGVVLATNTSYLDIDAI 428
Query: 432 ----GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
GE+ + +IG HFFSPA++M LLEIV + + +V+ K ++KV V G
Sbjct: 429 AASAGERAAD---VIGLHFFSPANLMKLLEIVLPAQVAPEVVATAFAFAKRLRKVAVRAG 485
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR Y +A L+ G ++ID AIR FG P+GP+Q
Sbjct: 486 VCDGFIGNRLLAVYRAAADYLMEDGASPYQIDRAIRGFGFPMGPYQ 531
>gi|330826858|ref|YP_004390161.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|329312230|gb|AEB86645.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 699
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 195/531 (36%), Positives = 288/531 (54%), Gaps = 32/531 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+AI+ + N PVNAL+ + L + + + + + IVL G+G FSGG DI F
Sbjct: 11 DGIAIVRIQNSPVNALSAQVRGDLYNALQSLSKEEAIVGIVLAGSGRGFSGGADIGEFGG 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G+ P V LIE+ KP+VAA+ G ALGGGLELAMGCHAR+A+ + +LG
Sbjct: 71 PAGSFRAGEDP----ARVTALIEEIDKPVVAAIHGFALGGGLELAMGCHARVASAQARLG 126
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE++LGVIPG GGTQRLPRLVG+SKA+EMML + I +E +GL++ VV + +
Sbjct: 127 LPEISLGVIPGAGGTQRLPRLVGVSKALEMMLSGRPINGKEAALIGLVELVVDDDPVSSA 186
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR------LQAKKTAPNM-PQHQ 245
RL I++ D +G + +V + +A+ A +M + +
Sbjct: 187 IRL------------IKNRQAGDGVGHATRFMQVPGAGKDNQAEIEKARSRATSMGAKSK 234
Query: 246 ACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTD 300
A L VIE G S G+ E + F + + S L HVFFA+RA K+ P +
Sbjct: 235 AALKVIECVAASVGQSFDEGMALEREAFSQCLESPESAALRHVFFAERAAGKLDTPGASG 294
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+G + V V+GGG MG GIA + I V L E+ + ++ I + +
Sbjct: 295 VGK----ISTVGVVGGGTMGRGIAMSFANAGIPVRLLELTEQKANTAVEAIRLEYQRQMD 350
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RGKL +A +++ + E D+V+EAV E + +K ++ L +AC I+A
Sbjct: 351 RGKLKAAEAAGRSALIQAARNEGEIGLCDLVVEAVFEDMQIKLEMAQRLGRACRDGAIIA 410
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTST+D++ + + + +G HFFSPA++M L+E+VR + TSA + ++ V K I
Sbjct: 411 SNTSTLDIDRLAQASGRPADFVGLHFFSPANIMRLVEVVRGKGTSANTLATVVEVVKRIA 470
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
KVPV+ G C GF NR PY + L+ G +ID AI FG+ +GP
Sbjct: 471 KVPVITGVCWGFVGNRMLEPYLREVESLLLEGASPSQIDHAIEGFGMAMGP 521
>gi|410897016|ref|XP_003961995.1| PREDICTED: peroxisomal bifunctional enzyme-like [Takifugu rubripes]
Length = 718
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 284/527 (53%), Gaps = 29/527 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF-QKV 73
V +ITL NPPVNAL+ + G+ D + A VK++V+ G G F GG DI F +++
Sbjct: 11 VGLITLQNPPVNALSASVRQGIVDSVKRALGDQKVKSVVICGQNGVFCGGADIREFGRQM 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G V ++ D IE KP+VAA+EG ALGGGLELA+GCH RI+ K +LGL
Sbjct: 71 SGPPLVPMIHD---------IEAANKPVVAAIEGSALGGGLELALGCHYRISHSKAKLGL 121
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+TLG++P GGTQRLPRL+G+ A+ ++ + +T+ E +LG++D V T + V+
Sbjct: 122 PEVTLGLLPAAGGTQRLPRLIGVPAALNLITTGRHVTAAEALQLGILDHV-TEHNTVDVA 180
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+AL + R + LS+ + + A L+ + A AC+ +
Sbjct: 181 VKFALSVTGESLDGRRI--SSFSCAPLSDLDSLFEEAMLKVRGAARGAIAPVACVQAVRA 238
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL---KPRGVRK 310
G+ +E ++ L +R L + FFAQRA + + +PR VRK
Sbjct: 239 AATLPYAQGMEREKELMATLFHSGQARALQYFFFAQRAVGRWSTPSGARWDTSQPRPVRK 298
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
AVIG G MG GI A + VV E +++ L++ K + + ++ RG T + +
Sbjct: 299 AAVIGLGTMGRGITVALAQAGLSVVAVETHAKQLMEAKKAVPSMLKRGAVRGGTTIEPDS 358
Query: 371 NALKMLKGVLDYSE----FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ YSE DVD+VIEAV E + LK+K+F +L C P +L TNTS++
Sbjct: 359 ---------ITYSETVQAVADVDLVIEAVFEDMALKEKVFQQLSIVCKPDTLLCTNTSSL 409
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + +T + ++G HFF+PAHVM LLE+V R+S + M +GK + KV V V
Sbjct: 410 DVDHLASQTRHPELVVGMHFFAPAHVMKLLEVVYGRRSSPAAVATAMQLGKKMGKVSVAV 469
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GNC GFA NR Y + A L+ G +D A+ FG P+G F+
Sbjct: 470 GNCRGFAGNRMLKRYLEQAFFLLEEGATPELVDRALEEFGFPMGVFR 516
>gi|420337039|ref|ZP_14838608.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-315]
gi|391260778|gb|EIQ19832.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-315]
Length = 714
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ APKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDAPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVELIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|83943661|ref|ZP_00956119.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
gi|83845341|gb|EAP83220.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
Length = 698
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 286/527 (54%), Gaps = 28/527 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL +A + D VKA+V+ G G F G DI F K
Sbjct: 13 VAVLRIKNPPVNALSHAVREGLVAGMAQAEADDGVKAVVIVGEGRAFIAGADITEFGKTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV IED +VA++ G++LGGGLE+A+ H R+A P ++GLP
Sbjct: 73 LE---PFLPDV-----CKRIEDSPLIVVASMHGVSLGGGLEIALSAHYRVAQPSAKVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG G TQRLPRL+G+ +++++ + + + E LG++D VT + V
Sbjct: 125 EVHLGLIPGAGATQRLPRLIGVDPSLDLITSGRQVKAAEAESLGIVDQ-VTEGDPEDVGV 183
Query: 195 LWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
+A ++ A P + + + + LK R Q A +
Sbjct: 184 AYAENLIATNAPRRPVSEMAAPAPIDWDAAYDGTLKKGRGQISPAQAVRAVQAAAELPFD 243
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
EG+ L E K+F EL+ D +G++H FF++RA +P + G++PR ++ +
Sbjct: 244 EGM--------LAERKIFMELMETDQRQGMIHAFFSERAVGNLPELK--GVEPRALQSIG 293
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK---- 368
+IGGG MG+GIATA +L VVL E+ + I N+ G + RGK+TQ K
Sbjct: 294 IIGGGTMGAGIATAALLAGFNVVLIEMKEDAAEAARGRIAGNLSGALKRGKITQMKYDAM 353
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
N AL++ ++Y VD+VIEAV E + +K+++F +L+ C P ILA+NTS +D+
Sbjct: 354 TNTALEV---SINYDSLASVDLVIEAVFEDMGVKKEVFGKLDAVCKPGAILASNTSYLDV 410
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + TS +IG HFFSPAH+M LLE+V E+T+ V+ +GK + K+ V G
Sbjct: 411 DEIAASTSRPADVIGLHFFSPAHIMKLLEVVVAEKTAPDVVATGFALGKALNKISVRAGV 470
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
C GF NR Y +A +V G F+ID A+ FG +GPF G
Sbjct: 471 CDGFIGNRILATYRTAADHMVLDGASPFQIDKALVDFGFAMGPFAVG 517
>gi|421491873|ref|ZP_15939235.1| FADJ [Morganella morganii subsp. morganii KT]
gi|400193633|gb|EJO26767.1| FADJ [Morganella morganii subsp. morganii KT]
Length = 717
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 287/535 (53%), Gaps = 11/535 (2%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A+V+ +G
Sbjct: 10 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 70 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H+R+ + KT+LGLPE+ LG++PG GGTQRLP L+GL A++MML + + +++ K+
Sbjct: 129 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKT 237
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q +++
Sbjct: 189 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVHRRS 246
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 247 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 304
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
+ G+KP + VAV+GGGLMG+GIA + V +K+V+ E K + ++
Sbjct: 305 -SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 363
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 364 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 423
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + + S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 424 TIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 483
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP
Sbjct: 484 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGP 538
>gi|427814623|ref|ZP_18981687.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 1289]
gi|410565623|emb|CCN23181.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 1289]
Length = 694
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 272/521 (52%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R P D + R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPR---PPAGD--MSARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|419346010|ref|ZP_13887384.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13A]
gi|419350424|ref|ZP_13891762.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13B]
gi|419355892|ref|ZP_13897149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13C]
gi|419360985|ref|ZP_13902202.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13D]
gi|432810034|ref|ZP_20043927.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE101]
gi|378185458|gb|EHX46083.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13A]
gi|378200154|gb|EHX60610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13C]
gi|378200602|gb|EHX61057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13B]
gi|378202632|gb|EHX63059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13D]
gi|431362802|gb|ELG49380.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE101]
Length = 714
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|419192393|ref|ZP_13735846.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7E]
gi|378038457|gb|EHW00972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7E]
Length = 709
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 3 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 63 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 121
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 122 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 181
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 182 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 237
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 238 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 296
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 297 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 355
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 356 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 415
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 416 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 475
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 476 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 529
>gi|331658515|ref|ZP_08359459.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA206]
gi|331054180|gb|EGI26207.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA206]
Length = 714
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVCAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAAKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ RTSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHARTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|187730524|ref|YP_001881164.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella boydii CDC 3083-94]
gi|254788616|sp|B2TWV4.1|FADJ_SHIB3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|187427516|gb|ACD06790.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii CDC
3083-94]
Length = 714
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>gi|415828918|ref|ZP_11515350.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1357]
gi|323184339|gb|EFZ69715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1357]
Length = 712
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|420381297|ref|ZP_14880748.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
225-75]
gi|391300387|gb|EIQ58308.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
225-75]
Length = 714
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCASHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>gi|424135291|ref|ZP_17867776.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
gi|390696619|gb|EIN71067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
Length = 714
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>gi|168748199|ref|ZP_02773221.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4113]
gi|168755101|ref|ZP_02780108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4401]
gi|168767975|ref|ZP_02792982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4486]
gi|168772924|ref|ZP_02797931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4196]
gi|168780206|ref|ZP_02805213.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4076]
gi|168787254|ref|ZP_02812261.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC869]
gi|168798519|ref|ZP_02823526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC508]
gi|195935722|ref|ZP_03081104.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EC4024]
gi|208808657|ref|ZP_03250994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4206]
gi|208814182|ref|ZP_03255511.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4045]
gi|208820502|ref|ZP_03260822.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4042]
gi|209400826|ref|YP_002271753.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EC4115]
gi|254794233|ref|YP_003079070.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. TW14359]
gi|261223205|ref|ZP_05937486.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259244|ref|ZP_05951777.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. FRIK966]
gi|416775623|ref|ZP_11874463.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. G5101]
gi|416787301|ref|ZP_11879372.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. 493-89]
gi|416798940|ref|ZP_11884289.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. H 2687]
gi|416809310|ref|ZP_11888973.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. 3256-97]
gi|416830816|ref|ZP_11898821.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. LSU-61]
gi|419070459|ref|ZP_13616082.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3E]
gi|419076420|ref|ZP_13621938.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3F]
gi|419081544|ref|ZP_13626992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4A]
gi|419087325|ref|ZP_13632682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4B]
gi|419093345|ref|ZP_13638630.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4C]
gi|419099023|ref|ZP_13644222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4D]
gi|419104917|ref|ZP_13650046.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4E]
gi|419121309|ref|ZP_13666265.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5B]
gi|420270734|ref|ZP_14773092.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
gi|420276357|ref|ZP_14778641.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
gi|420281267|ref|ZP_14783505.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW06591]
gi|420287475|ref|ZP_14789666.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10246]
gi|420299173|ref|ZP_14801222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09109]
gi|420304998|ref|ZP_14806994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10119]
gi|420310593|ref|ZP_14812526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1738]
gi|420315843|ref|ZP_14817719.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1734]
gi|421813312|ref|ZP_16249034.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0416]
gi|421824978|ref|ZP_16260345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK920]
gi|424084857|ref|ZP_17821360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA517]
gi|424091314|ref|ZP_17827259.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1996]
gi|424097900|ref|ZP_17833232.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1985]
gi|424116686|ref|ZP_17850547.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
gi|424129042|ref|ZP_17861963.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
gi|424154203|ref|ZP_17885174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
gi|424248025|ref|ZP_17890657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
gi|424325583|ref|ZP_17896579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
gi|424463177|ref|ZP_17913646.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
gi|424481823|ref|ZP_17930819.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07945]
gi|424487972|ref|ZP_17936556.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09098]
gi|424494571|ref|ZP_17942332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09195]
gi|424501341|ref|ZP_17948262.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4203]
gi|424507575|ref|ZP_17954001.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4196]
gi|424514904|ref|ZP_17959611.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14313]
gi|424521217|ref|ZP_17965358.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14301]
gi|424539280|ref|ZP_17982246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4013]
gi|424545307|ref|ZP_17987749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4402]
gi|424551555|ref|ZP_17993437.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4439]
gi|424557742|ref|ZP_17999175.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4436]
gi|424564089|ref|ZP_18005106.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4437]
gi|424570212|ref|ZP_18010793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4448]
gi|424576376|ref|ZP_18016475.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1845]
gi|424582221|ref|ZP_18021886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1863]
gi|425105064|ref|ZP_18507393.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.2239]
gi|425132688|ref|ZP_18533549.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.2524]
gi|425139154|ref|ZP_18539557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0833]
gi|425145012|ref|ZP_18545021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0869]
gi|425156944|ref|ZP_18556222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
gi|425181207|ref|ZP_18578913.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1999]
gi|425194242|ref|ZP_18591025.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE1487]
gi|425200681|ref|ZP_18596909.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE037]
gi|425207099|ref|ZP_18602911.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK2001]
gi|425243932|ref|ZP_18637252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
gi|425255919|ref|ZP_18648451.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
CB7326]
gi|425262134|ref|ZP_18654163.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC96038]
gi|425268171|ref|ZP_18659815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
gi|425295611|ref|ZP_18685827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
gi|425312276|ref|ZP_18701474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1735]
gi|425318227|ref|ZP_18707032.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1736]
gi|425330609|ref|ZP_18718494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1846]
gi|425336773|ref|ZP_18724176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1847]
gi|425343181|ref|ZP_18730096.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1848]
gi|425348978|ref|ZP_18735474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1849]
gi|425355276|ref|ZP_18741364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1850]
gi|425361236|ref|ZP_18746907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1856]
gi|425367411|ref|ZP_18752603.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1862]
gi|425373781|ref|ZP_18758444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1864]
gi|425386631|ref|ZP_18770208.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1866]
gi|425393353|ref|ZP_18776480.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1868]
gi|425399449|ref|ZP_18782176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1869]
gi|425405531|ref|ZP_18787784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1870]
gi|428966568|ref|ZP_19037345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0091]
gi|428972320|ref|ZP_19042682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0039]
gi|429033614|ref|ZP_19099156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0939]
gi|429039717|ref|ZP_19104847.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0932]
gi|429056364|ref|ZP_19120703.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.1742]
gi|429068204|ref|ZP_19131685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0672]
gi|429074102|ref|ZP_19137365.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0678]
gi|444925886|ref|ZP_21245201.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
09BKT078844]
gi|444931601|ref|ZP_21250653.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0814]
gi|444937007|ref|ZP_21255797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0815]
gi|444942633|ref|ZP_21261164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0816]
gi|444948194|ref|ZP_21266513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0839]
gi|444970329|ref|ZP_21287702.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1793]
gi|444975583|ref|ZP_21292725.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1805]
gi|444981049|ref|ZP_21297967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
700728]
gi|444991701|ref|ZP_21308356.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
gi|444997016|ref|ZP_21313524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
gi|445002569|ref|ZP_21318967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
gi|445008072|ref|ZP_21324321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
gi|445013097|ref|ZP_21329215.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
gi|445018979|ref|ZP_21334952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
gi|445024483|ref|ZP_21340316.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
7.1982]
gi|445035221|ref|ZP_21350761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1762]
gi|445040848|ref|ZP_21356234.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
gi|445046040|ref|ZP_21361302.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4880]
gi|452970986|ref|ZP_21969213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O157:H7 str. EC4009]
gi|254788660|sp|B5YXY4.1|FADJ_ECO5E RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|187771297|gb|EDU35141.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4196]
gi|188017231|gb|EDU55353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4113]
gi|189002100|gb|EDU71086.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4076]
gi|189357657|gb|EDU76076.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4401]
gi|189363024|gb|EDU81443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4486]
gi|189372935|gb|EDU91351.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC869]
gi|189379042|gb|EDU97458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC508]
gi|208728458|gb|EDZ78059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4206]
gi|208735459|gb|EDZ84146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4045]
gi|208740625|gb|EDZ88307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4042]
gi|209162226|gb|ACI39659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4115]
gi|209764648|gb|ACI80636.1| putative enzyme [Escherichia coli]
gi|209764652|gb|ACI80638.1| putative enzyme [Escherichia coli]
gi|209764656|gb|ACI80640.1| putative enzyme [Escherichia coli]
gi|254593633|gb|ACT72994.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. TW14359]
gi|320641168|gb|EFX10647.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. G5101]
gi|320646384|gb|EFX15307.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. 493-89]
gi|320651654|gb|EFX20034.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. H 2687]
gi|320657405|gb|EFX25207.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320667685|gb|EFX34596.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. LSU-61]
gi|377912289|gb|EHU76452.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3E]
gi|377921461|gb|EHU85460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3F]
gi|377926174|gb|EHU90109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4A]
gi|377930515|gb|EHU94398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4B]
gi|377941787|gb|EHV05524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4C]
gi|377942133|gb|EHV05869.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4D]
gi|377947400|gb|EHV11067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4E]
gi|377966533|gb|EHV29944.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5B]
gi|390641802|gb|EIN21226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1996]
gi|390642583|gb|EIN21972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA517]
gi|390662003|gb|EIN39631.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1985]
gi|390677609|gb|EIN53627.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
gi|390683582|gb|EIN59250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
gi|390714246|gb|EIN87160.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
gi|390722914|gb|EIN95546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
gi|390724209|gb|EIN96777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
gi|390727679|gb|EIO00080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
gi|390757767|gb|EIO27237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
gi|390768844|gb|EIO37832.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
gi|390781554|gb|EIO49231.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW06591]
gi|390790232|gb|EIO57660.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10246]
gi|390790792|gb|EIO58194.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07945]
gi|390805932|gb|EIO72855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09098]
gi|390806868|gb|EIO73770.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09109]
gi|390816020|gb|EIO82532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10119]
gi|390826032|gb|EIO91902.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4203]
gi|390830594|gb|EIO96111.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09195]
gi|390831299|gb|EIO96708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4196]
gi|390845992|gb|EIP09608.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14301]
gi|390846714|gb|EIP10285.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14313]
gi|390865611|gb|EIP27614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4013]
gi|390870809|gb|EIP32278.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4402]
gi|390878696|gb|EIP39518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4439]
gi|390883653|gb|EIP44066.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4436]
gi|390893550|gb|EIP53095.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4437]
gi|390895930|gb|EIP55336.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4448]
gi|390899872|gb|EIP59108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1738]
gi|390907833|gb|EIP66674.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1734]
gi|390919156|gb|EIP77514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1863]
gi|390920279|gb|EIP78560.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1845]
gi|408068030|gb|EKH02458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK920]
gi|408070461|gb|EKH04820.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
gi|408097232|gb|EKH30131.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1999]
gi|408108583|gb|EKH40586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE1487]
gi|408115018|gb|EKH46494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE037]
gi|408121416|gb|EKH52377.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK2001]
gi|408160211|gb|EKH88255.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
gi|408173357|gb|EKI00387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
CB7326]
gi|408180415|gb|EKI07027.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC96038]
gi|408182813|gb|EKI09297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
gi|408217470|gb|EKI41720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
gi|408227353|gb|EKI50949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1735]
gi|408238414|gb|EKI61216.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1736]
gi|408247071|gb|EKI69298.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1846]
gi|408256199|gb|EKI77588.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1847]
gi|408259145|gb|EKI80341.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1848]
gi|408265519|gb|EKI86209.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1849]
gi|408274698|gb|EKI94686.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1850]
gi|408277131|gb|EKI96945.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1856]
gi|408286830|gb|EKJ05745.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1862]
gi|408291014|gb|EKJ09661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1864]
gi|408307996|gb|EKJ25282.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1866]
gi|408308036|gb|EKJ25321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1868]
gi|408319198|gb|EKJ35353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1869]
gi|408325949|gb|EKJ41792.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1870]
gi|408550210|gb|EKK27555.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.2239]
gi|408579416|gb|EKK54877.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0833]
gi|408581105|gb|EKK56460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.2524]
gi|408591733|gb|EKK66154.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0869]
gi|408601136|gb|EKK74952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0416]
gi|427222096|gb|EKV90895.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0091]
gi|427228062|gb|EKV96546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0039]
gi|427283576|gb|EKW47784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0939]
gi|427291890|gb|EKW55263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0932]
gi|427313055|gb|EKW75189.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.1742]
gi|427319462|gb|EKW81274.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0672]
gi|427328447|gb|EKW89814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0678]
gi|444538241|gb|ELV18119.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0814]
gi|444539785|gb|ELV19494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
09BKT078844]
gi|444547529|gb|ELV26115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0815]
gi|444557382|gb|ELV34729.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0839]
gi|444558353|gb|ELV35640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0816]
gi|444579359|gb|ELV55354.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1793]
gi|444593391|gb|ELV68610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
700728]
gi|444595410|gb|ELV70513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1805]
gi|444607051|gb|ELV81647.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
gi|444607570|gb|ELV82146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
gi|444615922|gb|ELV90105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
gi|444623424|gb|ELV97345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
gi|444624739|gb|ELV98621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
gi|444629643|gb|ELW03327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
gi|444638638|gb|ELW11970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
7.1982]
gi|444645172|gb|ELW18246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1762]
gi|444654498|gb|ELW27164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
gi|444659894|gb|ELW32281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4880]
Length = 714
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>gi|432481707|ref|ZP_19723664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE210]
gi|431007079|gb|ELD22048.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE210]
Length = 714
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|410474786|ref|YP_006898067.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella parapertussis Bpp5]
gi|408444896|emb|CCJ51684.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella parapertussis Bpp5]
Length = 705
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 276/522 (52%), Gaps = 21/522 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C KP+VAA+ G ALGGGLEL + CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCHKPVVAALHGQALGGGLELGLACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG+IPG GGTQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 195 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 251 IEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFVRGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMCLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GF NR ++ LL+ G ID A R FG +GP
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGP 526
>gi|424469529|ref|ZP_17919374.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
gi|390767645|gb|EIO36720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
Length = 712
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 532
>gi|149731446|ref|XP_001498786.1| PREDICTED: peroxisomal bifunctional enzyme [Equus caballus]
Length = 723
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 292/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA+++ ++ G+++ +A + VKAIVL G GG FS GFDI F
Sbjct: 8 QNRLALIRLRNPPVNAISVAVLRGIQEGLRKALTDHTVKAIVLCGAGGYFSAGFDIRGF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
A +S D ++ +V+ ++ KP+VAA++G ALGGGLELA+GCH RIA K Q+
Sbjct: 67 ---SAPRIS---DFTLGSLVDELQRNNKPVVAAIQGFALGGGLELALGCHYRIAHAKAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE++LG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 121 GLPEVSLGLLPGGRGTQLLPRLIGVPAALDLITSGRCILADEALKLGILDEIVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+K++ R+ + +RR KP ++SL D + SEA L+ +K P
Sbjct: 181 AIKLAQRVSDQPLESRRLYNKP-VQSLPNMDTI--FSEAL-------LKMRKQYPGCLSQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+ C+ ++ + + G+ KE ++F L+ +R L + F A+R K + K
Sbjct: 231 ETCVRAVQAAVQYPYEVGIKKEEELFMYLLESGQARALQYAFLAERNARKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
PR + V+G G MG GI + I V+ E + + L K I + + V++
Sbjct: 291 TASPRPISSAGVVGLGTMGRGIVISLAKAKIPVIAVESDKKQLEIANKIITSALEREVSK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E DVD+VIEAV E + LK+K+F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTTAM--KELSDVDLVIEAVFEEMNLKKKVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T+ +IG HFFSPAHVM LLE++ + +S I +M + K I+K
Sbjct: 409 NTSALDVDEIASSTNRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIQK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNC F NR Y L+ G ID + FG +GPF+
Sbjct: 469 FGVVVGNCFSFVGNRMLNSYYNQTYFLLEEGSKPEEIDQVLEEFGFKLGPFR 520
>gi|157155802|ref|YP_001463687.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli E24377A]
gi|417640098|ref|ZP_12290239.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TX1999]
gi|419171021|ref|ZP_13714907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7A]
gi|419181659|ref|ZP_13725272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7C]
gi|419187103|ref|ZP_13730617.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7D]
gi|420386409|ref|ZP_14885759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa12]
gi|433130908|ref|ZP_20316343.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE163]
gi|433135570|ref|ZP_20320914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE166]
gi|166972668|sp|A7ZPF8.1|FADJ_ECO24 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157077832|gb|ABV17540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E24377A]
gi|345393100|gb|EGX22878.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TX1999]
gi|378015065|gb|EHV77962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7A]
gi|378023292|gb|EHV85969.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7C]
gi|378029095|gb|EHV91711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7D]
gi|391305119|gb|EIQ62914.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa12]
gi|431645705|gb|ELJ13249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE163]
gi|431656248|gb|ELJ23269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE166]
Length = 714
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417690473|ref|ZP_12339695.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
5216-82]
gi|332088475|gb|EGI93593.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
5216-82]
Length = 714
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|421774531|ref|ZP_16211143.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
gi|408460279|gb|EKJ84058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
Length = 714
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|418041755|ref|ZP_12679970.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W26]
gi|383475326|gb|EID67290.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W26]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|209919841|ref|YP_002293925.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SE11]
gi|419370841|ref|ZP_13911960.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14A]
gi|422355201|ref|ZP_16435920.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
117-3]
gi|254788654|sp|B6I6Q4.1|FADJ_ECOSE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|209913100|dbj|BAG78174.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324016851|gb|EGB86070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
117-3]
gi|378217435|gb|EHX77714.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14A]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|293410698|ref|ZP_06654274.1| fatty oxidation complex [Escherichia coli B354]
gi|291471166|gb|EFF13650.1| fatty oxidation complex [Escherichia coli B354]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+EK C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEKNCAAHIIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|331663858|ref|ZP_08364768.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA143]
gi|331059657|gb|EGI31634.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA143]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLCENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQSEALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|410420157|ref|YP_006900606.1| enoyl-CoA isomerase [Bordetella bronchiseptica MO149]
gi|408447452|emb|CCJ59126.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica MO149]
Length = 694
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 269/521 (51%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQACARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+ +P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPLPVVALLDGAALGGALELALGCHYRLVSPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ A P +
Sbjct: 185 LAWM-----RNAPGGLAPRRVASLPALAPASIAEAAR---EAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R + + R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDAS-----ARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVRQHFERLAARQRLTPGQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA VMPLLE+VR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEVVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|397171920|ref|ZP_10495318.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
gi|396086638|gb|EJI84250.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
Length = 712
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 291/536 (54%), Gaps = 18/536 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CHAR
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPVVAAIHGPCLGGGLELALACHAR 127
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ PKT LGLPE+ LG++PG GGTQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQVRAAQAKKLGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 236
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPESAALRSIFFATTQMKKES 303
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVAVRIKDIAEQGINNALKYSFDIL 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
+ +++ + L ++ G DYS F DVD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ E+TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHEKTSAETIATTVAF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGP 537
>gi|424104093|ref|ZP_17838890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1990]
gi|425151060|ref|ZP_18550691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.0221]
gi|425324330|ref|ZP_18712715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1737]
gi|428947960|ref|ZP_19020266.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1467]
gi|429002859|ref|ZP_19071020.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0183]
gi|444953699|ref|ZP_21271807.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0848]
gi|390663927|gb|EIN41403.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1990]
gi|408242653|gb|EKI65219.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1737]
gi|408596330|gb|EKK70471.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.0221]
gi|427208819|gb|EKV78908.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1467]
gi|427261857|gb|EKW27774.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0183]
gi|444563518|gb|ELV40514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0848]
Length = 712
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 532
>gi|417592637|ref|ZP_12243333.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2534-86]
gi|345338476|gb|EGW70906.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2534-86]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|191165478|ref|ZP_03027319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
gi|260856384|ref|YP_003230275.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. 11368]
gi|260869062|ref|YP_003235464.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O111:H- str. 11128]
gi|293446676|ref|ZP_06663098.1| fatty oxidation complex [Escherichia coli B088]
gi|309796788|ref|ZP_07691191.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
145-7]
gi|415784193|ref|ZP_11492156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa14]
gi|415822778|ref|ZP_11511297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1180]
gi|417154945|ref|ZP_11993074.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0497]
gi|417204521|ref|ZP_12018781.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
JB1-95]
gi|417299961|ref|ZP_12087188.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
900105 (10e)]
gi|417581859|ref|ZP_12232661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_B2F1]
gi|417597661|ref|ZP_12248300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3030-1]
gi|417667755|ref|ZP_12317300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_O31]
gi|419197851|ref|ZP_13741237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8A]
gi|419204346|ref|ZP_13747527.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8B]
gi|419210549|ref|ZP_13753626.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8C]
gi|419222355|ref|ZP_13765276.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8E]
gi|419227622|ref|ZP_13770476.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9A]
gi|419233186|ref|ZP_13775962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9B]
gi|419238649|ref|ZP_13781364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9C]
gi|419244117|ref|ZP_13786755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9D]
gi|419249940|ref|ZP_13792523.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9E]
gi|419255808|ref|ZP_13798323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10A]
gi|419262028|ref|ZP_13804445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10B]
gi|419273520|ref|ZP_13815815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10D]
gi|419285051|ref|ZP_13827222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10F]
gi|419876201|ref|ZP_14397971.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9534]
gi|419884579|ref|ZP_14405500.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9545]
gi|419889127|ref|ZP_14409557.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9570]
gi|419895595|ref|ZP_14415391.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9574]
gi|419905137|ref|ZP_14424109.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9942]
gi|419909058|ref|ZP_14427693.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. CVM10026]
gi|420091081|ref|ZP_14602839.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9602]
gi|420096119|ref|ZP_14607554.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9634]
gi|420102230|ref|ZP_14613255.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9455]
gi|420111084|ref|ZP_14620961.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9553]
gi|420116680|ref|ZP_14626057.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10021]
gi|420122109|ref|ZP_14631119.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10030]
gi|420127373|ref|ZP_14636009.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10224]
gi|420131852|ref|ZP_14640255.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9952]
gi|424753000|ref|ZP_18180965.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CFSAN001629]
gi|424761879|ref|ZP_18189408.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CFSAN001630]
gi|424774326|ref|ZP_18201341.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CFSAN001632]
gi|425380402|ref|ZP_18764440.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1865]
gi|425423154|ref|ZP_18804322.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1288]
gi|190904401|gb|EDV64109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
gi|257755033|dbj|BAI26535.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. 11368]
gi|257765418|dbj|BAI36913.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O111:H- str. 11128]
gi|291323506|gb|EFE62934.1| fatty oxidation complex [Escherichia coli B088]
gi|308119547|gb|EFO56809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
145-7]
gi|323156494|gb|EFZ42649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa14]
gi|323176733|gb|EFZ62323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1180]
gi|345337630|gb|EGW70062.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_B2F1]
gi|345352890|gb|EGW85128.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3030-1]
gi|378046408|gb|EHW08787.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8A]
gi|378047781|gb|EHW10139.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8B]
gi|378053245|gb|EHW15545.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8C]
gi|378064930|gb|EHW27080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8E]
gi|378073534|gb|EHW35581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9A]
gi|378076928|gb|EHW38926.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9B]
gi|378083688|gb|EHW45619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9C]
gi|378090053|gb|EHW51893.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9D]
gi|378094962|gb|EHW56753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9E]
gi|378099603|gb|EHW61307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10A]
gi|378105718|gb|EHW67357.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10B]
gi|378116007|gb|EHW77540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10D]
gi|378130395|gb|EHW91759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10F]
gi|386168034|gb|EIH34550.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0497]
gi|386198330|gb|EIH92513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
JB1-95]
gi|386256796|gb|EIJ12290.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
900105 (10e)]
gi|388345468|gb|EIL11239.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9534]
gi|388353818|gb|EIL18792.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9545]
gi|388358410|gb|EIL22867.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9570]
gi|388360357|gb|EIL24576.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9574]
gi|388365962|gb|EIL29724.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9942]
gi|388374019|gb|EIL37242.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. CVM10026]
gi|394384460|gb|EJE62020.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9602]
gi|394388984|gb|EJE66182.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10224]
gi|394390351|gb|EJE67365.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9634]
gi|394399651|gb|EJE75655.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9553]
gi|394402971|gb|EJE78647.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10021]
gi|394412679|gb|EJE86809.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9455]
gi|394423194|gb|EJE96461.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10030]
gi|394430921|gb|EJF03190.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9952]
gi|397784901|gb|EJK95754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_O31]
gi|408296468|gb|EKJ14709.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1865]
gi|408343709|gb|EKJ58103.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1288]
gi|421934275|gb|EKT92050.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CFSAN001632]
gi|421936046|gb|EKT93714.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CFSAN001629]
gi|421941754|gb|EKT99130.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CFSAN001630]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|13473557|ref|NP_105125.1| enoyl-CoA hydratase [Mesorhizobium loti MAFF303099]
gi|14024307|dbj|BAB50911.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
loti MAFF303099]
Length = 689
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 284/526 (53%), Gaps = 14/526 (2%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V ++GVAI+T+ N PVNAL+ + A L + V AIV+ G F G DI
Sbjct: 8 VNDNGVAIVTIDNSPVNALSFHVRAPLMQALVDLRDDASVTAIVIACAGRTFVAGADITE 67
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
F G PD+ +V ++E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 68 F------GKPVQQPDLRA--IVAMLETIAKPTVAAIHGTALGGGLELALGCHFRVADAGA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+ LG++PG GGT RLPRLVG KA++M++ I ++E + GL+DAV + L
Sbjct: 120 KLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGTPIGADEAHEAGLVDAVFEGD-L 178
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A +IA + P+ R ++LG A + A L K P AC
Sbjct: 179 TTHAVNFAGEIARKGGPFTPVRDRDERLGETDLAAFDAEAADLARKARGLEAPV--ACAQ 236
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + + E +F +LV D SR H+FFA+R +K+P R +
Sbjct: 237 AVRNAVTLPFDEALAAERALFVKLVASDQSRAQRHLFFAEREAAKLPAKDTY---KRRIA 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+V VIG G MG GIA A V L E ++E L +G+ TIE N V+RG L +D
Sbjct: 294 RVGVIGAGTMGGGIAMAFANGGFSVTLLETSAEALQRGLGTIEKNYAVSVSRGSLAEDAK 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
+ L KG DY++ + D++IEAV E + +K+++F +L+ P ILATNTS +D+N
Sbjct: 354 HQRLAQFKGSTDYADLAECDLIIEAVFEDMAVKKEVFGKLDAVAKPGAILATNTSYLDIN 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S ++G HFFSPA+VM LLEIVR ++T+ + ++ + + I KV VVVG C
Sbjct: 414 EIAGSISRPQDVLGLHFFSPANVMKLLEIVRADKTAPDALATVIDLARRIGKVAVVVGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + L+ G +ID A FG P+GPFQ G
Sbjct: 474 HGFVGNRMLAARGSESEALLLEGATPSQIDKAFTDFGWPMGPFQMG 519
>gi|354484178|ref|XP_003504267.1| PREDICTED: peroxisomal bifunctional enzyme-like [Cricetulus
griseus]
Length = 722
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 288/522 (55%), Gaps = 16/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ +++G+++ ++A S +KA+V+ G+ G FS G DI+ F
Sbjct: 11 LAMIRLCNPPVNAISPAVISGIREGLQKAGSDYTIKAVVICGSNGIFSAGADIHSFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S P + + VV+ ++ CKKP+VAA++ +ALGGGLELA+GCH RIA + ++G P
Sbjct: 68 -----SPSPGLRLGDVVDEMQRCKKPLVAAIQSVALGGGLELALGCHYRIANAQARIGFP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VVTS+ + + R
Sbjct: 123 EVTLGILPGARGTQLLPRLIGVPIALDLITSGRHILAGEALKLGILDEVVTSDPVEEAVR 182
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+A I + R L++ + SL + A + +K P + C+ ++
Sbjct: 183 -FAQKIMDKPIEPRRILNKP--VPSLPNMDRIFAEAITKVRKQFPGRLAPETCVRSVQAS 239
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 311
+ H G+ +E K+F L +R L + FFA+++ +K + K + V V
Sbjct: 240 VKHPYEVGIKEEEKLFMYLRASGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 299
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + + VV E + + L K I A + + K+ Q +
Sbjct: 300 GVLGLGTMGRGIAISFVRAGFPVVAVESDLKQLDSARKMITATLEKEAS--KMQQSGQAS 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
A L+ E VD+V+EAV E + LK+++F+EL C P L TNTS ++++ +
Sbjct: 358 ARPKLRFSSSTKELSSVDLVVEAVFEDMNLKKQVFAELSALCKPGAFLCTNTSALNVDEI 417
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPAH+M LLE++ + +S I +M + K I K+ VVVGNC G
Sbjct: 418 ASATDCPHLVIGTHFFSPAHIMKLLEVIPSRYSSPATIATVMNLSKKIGKIGVVVGNCHG 477
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR PY L+ G ID AI FG +GPF+
Sbjct: 478 FVGNRMLSPYYSQTYFLLEEGSKPEDIDGAIEEFGFRMGPFR 519
>gi|415840477|ref|ZP_11521905.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
RN587/1]
gi|417282515|ref|ZP_12069815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
gi|425278640|ref|ZP_18669885.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
ARS4.2123]
gi|323187934|gb|EFZ73229.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
RN587/1]
gi|386246844|gb|EII88574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
gi|408201827|gb|EKI26970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
ARS4.2123]
Length = 714
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 283/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM++ K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDISAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|417192133|ref|ZP_12014233.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0522]
gi|386191015|gb|EIH79761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0522]
Length = 714
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|419216424|ref|ZP_13759424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8D]
gi|419268062|ref|ZP_13810414.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10C]
gi|378061438|gb|EHW23623.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8D]
gi|378110713|gb|EHW72307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10C]
Length = 712
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|334344251|ref|YP_004552803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100873|gb|AEG48297.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 282/532 (53%), Gaps = 19/532 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT EV +A+IT +PPVNAL+ + G+ + A V A+VL G F G
Sbjct: 7 VTYEV-EGPIAVITAHSPPVNALSSAVRQGIAGAVQTALGDGSVGAMVLICEGRTFFAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F G + P + +++L+V E+ KP++AA+ G ALGGGLELA+ H RI
Sbjct: 66 DITEF------GKPPVEPTLRNLQLIV---ENATKPVIAAIHGTALGGGLELALVAHYRI 116
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A P + GLPE+ LG++PG GGTQRLPR+VG+ KA+++ + + ++GL+D +
Sbjct: 117 AVPSAKCGLPEVKLGLLPGAGGTQRLPRIVGIEKALDLTTSGAPVGARAAKEMGLVDELA 176
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKK-TAPNMP 242
+ L + +A + ++P ++ RT+KL E+ + A+K P
Sbjct: 177 QGD-LRADAIAFARRVLEEKRPLLKVRDRTEKLDEARGKPEIFANFRKANARKFRGFKAP 235
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DI 301
+H + +E + G++ E ++F EL S HVFFA+R +KV + D
Sbjct: 236 EH--IIRCVEATLEKSFDEGMVYERQLFNELQSDSQSAAQRHVFFAERQAAKVLGLAADT 293
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
P + KV VIG G MG GIA I V + E E L +G+ I N +
Sbjct: 294 PTLP--IAKVGVIGAGTMGGGIAMNFANAGIPVTIVEAKQEALDRGLGIIRGNYESTAKK 351
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G++ + + + +L G + + D D++IEAV E++ +K+++F L+ P ILAT
Sbjct: 352 GRMKAEDVDTRMGLLTGSVAMEDLADCDLIIEAVFENLDVKREVFGTLDAIARPGAILAT 411
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T + + G HFFSPA+VM LLE+VRT+ TS ++++ M + K I K
Sbjct: 412 NTSYLDIDDIAAATERPESVCGLHFFSPANVMKLLEVVRTKDTSPEIVVTAMKLAKTIGK 471
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ V+VGN GF NR + A LV G + +D + FG +G FQ
Sbjct: 472 IGVLVGNGFGFVGNRILAARNAQADRLVLEGATPWTVDRVLYDFGFAMGHFQ 523
>gi|56695641|ref|YP_165992.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
gi|56677378|gb|AAV94044.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Ruegeria pomeroyi DSS-3]
Length = 681
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 283/527 (53%), Gaps = 27/527 (5%)
Query: 10 VGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
V DG +A + + +PPVNA + P+ AGL E + +LT G F G D+
Sbjct: 9 VRRDGDIAWVEIDSPPVNATSTPVRAGLARAVAEVQG---ARVAILTCAGRTFVAGGDMT 65
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F + + +PDV V +IED + P VAA+ G LGGG E+A+ C RIAAP
Sbjct: 66 EFDR---PAEEPHLPDV-----VQMIEDSETPFVAAMHGTVLGGGFEIALACAWRIAAPG 117
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
T+ GLPE+ +G+IPG GGTQR PRL+G+ AI+M K + + + LG +D V +
Sbjct: 118 TKFGLPEVNVGLIPGAGGTQRAPRLIGMMAAIDMACSGKMLDAAQMLALGGLDQVAEGD- 176
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGS--LSEAREVLKLARLQAKKTAPNMPQHQA 246
L ++ +A + R P L + L S L+EA+ L A AK A P H
Sbjct: 177 LRAAAQGFAKGLPPR--PEKTRLRQVQALNSEALAEAKRALSKA---AKGRA--APLHN- 228
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
LD ++ + G +E + L D SR L + FFA+R ++ + G+ PR
Sbjct: 229 -LDALQWAALPFD-QGQPRERALHLGLRQSDESRALRYAFFAERLVARPDAIA--GVTPR 284
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ +VA++GGGLMG+G+A A + + V + E ++ + + V V RGK++
Sbjct: 285 ELTRVAIVGGGLMGAGVAMACLGGGLSVTVIERDAAAAQAAQERVAGLVAAGVKRGKISP 344
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
D + L L Y++ D D+ IEAV E + +K+ +F++L P ILATNTS +
Sbjct: 345 DAQADMLARLATTDTYADASDADLAIEAVFEDLDVKRIVFADLAAVMRPDAILATNTSYL 404
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D +V ++ R +G HFFSPAHVM LLEIV+T T+ +V+ +GK ++K+ V+
Sbjct: 405 DPQLVFAGIANPARCLGLHFFSPAHVMKLLEIVKTPDTAPEVLATGFALGKRLRKISVLS 464
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G C GF NR Y + A L++ G +D+A+R+ GLP+GPF+
Sbjct: 465 GICDGFIGNRMLAAYRREAEYLLADGALPHEVDAAMRAQGLPMGPFE 511
>gi|191173765|ref|ZP_03035287.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
gi|300986886|ref|ZP_07177866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
200-1]
gi|422373220|ref|ZP_16453542.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
60-1]
gi|432471706|ref|ZP_19713751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE206]
gi|432714118|ref|ZP_19949157.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
gi|433078518|ref|ZP_20265054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE131]
gi|190905913|gb|EDV65530.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
gi|300306341|gb|EFJ60861.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
200-1]
gi|324015420|gb|EGB84639.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
60-1]
gi|430997710|gb|ELD13966.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE206]
gi|431256413|gb|ELF49486.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
gi|431596213|gb|ELI66174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE131]
Length = 714
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|110642544|ref|YP_670274.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 536]
gi|123049009|sp|Q0TFA6.1|FADJ_ECOL5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|110344136|gb|ABG70373.1| putative fatty oxidation complex alpha subunit [Escherichia coli
536]
Length = 714
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 282/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|417232239|ref|ZP_12033637.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0959]
gi|417608981|ref|ZP_12259484.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_DG131-3]
gi|345358190|gb|EGW90378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_DG131-3]
gi|386205238|gb|EII09749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0959]
Length = 714
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|408416053|ref|YP_006626760.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Bordetella
pertussis 18323]
gi|401778223|emb|CCJ63616.1| Enoyl-CoA hydratase (EC 4.2.1.17) /
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
/ 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
[Bordetella pertussis 18323]
Length = 694
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 271/521 (52%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+ +R DV+A++L + G FS G DI F +
Sbjct: 11 IEVVTLDSPPVNALGRTLRHGLAQCLEQVYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRCKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDRAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|386619960|ref|YP_006139540.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
gi|387830270|ref|YP_003350207.1| hypothetical protein ECSF_2217 [Escherichia coli SE15]
gi|432500875|ref|ZP_19742632.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE216]
gi|432559587|ref|ZP_19796256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
gi|432695202|ref|ZP_19930400.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE162]
gi|432711391|ref|ZP_19946450.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
gi|432919851|ref|ZP_20123917.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE173]
gi|432927738|ref|ZP_20129135.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE175]
gi|432981762|ref|ZP_20170537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE211]
gi|433097204|ref|ZP_20283387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE139]
gi|433106648|ref|ZP_20292621.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE148]
gi|281179427|dbj|BAI55757.1| conserved hypothetical protein [Escherichia coli SE15]
gi|333970461|gb|AEG37266.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
gi|431028452|gb|ELD41496.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE216]
gi|431090807|gb|ELD96558.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
gi|431233290|gb|ELF28881.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE162]
gi|431248720|gb|ELF42909.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
gi|431442879|gb|ELH23958.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE173]
gi|431443536|gb|ELH24563.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE175]
gi|431491071|gb|ELH70678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE211]
gi|431614785|gb|ELI83919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE139]
gi|431626575|gb|ELI95121.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE148]
Length = 714
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 283/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|432422685|ref|ZP_19665230.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE178]
gi|430944297|gb|ELC64396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE178]
Length = 714
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|393767275|ref|ZP_10355824.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
gi|392727176|gb|EIZ84492.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
Length = 690
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 290/524 (55%), Gaps = 18/524 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ GVA++TL NPPVNAL + A L A + + V+AIVL G F GG DI+ F
Sbjct: 7 DGGVAVLTLANPPVNALGAALRAALDGALARAEADEAVRAIVLAAEGKVFVGGADISEFG 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +PDV + ++ +KP+VAA+ G ALGGGLELAM CH R+AAP +L
Sbjct: 67 KPPQA---PSLPDV-----LERLDAGRKPVVAAIGGAALGGGLELAMACHGRVAAPAAKL 118
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GGTQRLPRL+G A MML + +++E KLG++DAVV + L+
Sbjct: 119 GLPEIKLGIIPGAGGTQRLPRLIGPDAAFTMMLTGEPVSAEIAAKLGIVDAVVLGD-LVP 177
Query: 192 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+R+ AL++A P +R R D L EAR+ + A K P A
Sbjct: 178 AARIRALELADSGALPRVRD--RVDTL--TPEARQAFEAKAEAAVKRDPEATNVHALARA 233
Query: 251 IEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGV 308
+ G+ + + V E F+ LV S+ L + FFA+R ++VP ++ D +P V
Sbjct: 234 VRAGLDPDAFDAAVAVERAEFRTLVEDPRSKALRYAFFAEREAARVPGLSKDTPRRP--V 291
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
AVIG G MG GIA I V + E + L +G+ ++ G RG +T+ +
Sbjct: 292 ETAAVIGAGTMGGGIAMCFANAGIPVTVIETEAGALERGLDRVKGLYAGSAKRGSITEAQ 351
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ + + G + + D+VIEA E + +K++IFS+L+ P ILATNTS +D+
Sbjct: 352 RDERIGRITGAIGLENAGEADIVIEAAFEDMAVKREIFSKLDGIAKPGAILATNTSYLDV 411
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T ++G HFFSPA+VM L+E+VR +T+ V+ + + K + K+PV VG
Sbjct: 412 DAIAAVTGRPQDVLGLHFFSPANVMRLVEVVRASKTAPDVLATALHLAKRLNKLPVTVGV 471
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
C GF NR S++A L+ G +D+A+ FG +GPF
Sbjct: 472 CFGFVGNRILERRSRAAERLLLEGALPHAVDAAVTGFGFRMGPF 515
>gi|194432919|ref|ZP_03065203.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1012]
gi|417673098|ref|ZP_12322554.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
155-74]
gi|420348240|ref|ZP_14849629.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
965-58]
gi|194418907|gb|EDX34992.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1012]
gi|332090133|gb|EGI95232.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
155-74]
gi|391269243|gb|EIQ28155.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
965-58]
Length = 714
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQTLKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432602939|ref|ZP_19839183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
gi|431141513|gb|ELE43278.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
Length = 714
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|331684013|ref|ZP_08384609.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
gi|450191006|ref|ZP_21891064.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SEPT362]
gi|331078965|gb|EGI50167.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
gi|449319906|gb|EMD09950.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SEPT362]
Length = 714
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAQPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDTALVKFGFPVGPIQ 534
>gi|432802558|ref|ZP_20036537.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
gi|431348347|gb|ELG35205.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
Length = 714
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417122429|ref|ZP_11971687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0246]
gi|386147709|gb|EIG94149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0246]
Length = 714
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 281/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|410970845|ref|XP_003991887.1| PREDICTED: peroxisomal bifunctional enzyme [Felis catus]
Length = 723
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 294/534 (55%), Gaps = 33/534 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ ++ G+K+ ++A + VKAIV+ G G+FS G DI+ F
Sbjct: 8 QNWLALIRLRNPPVNAISTSVLHGIKEGLQKAVTDHTVKAIVICGADGKFSAGADIHGF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P + + VV+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA + Q+
Sbjct: 67 ------TAPRKPTIVLGHVVDEIQRNEKPVVAAIQGMALGGGLELALGCHYRIAHAEAQI 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
G PE+ LG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 121 GFPEVRLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDEMVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+K++ R+ + +RR KP I+SL D E+ A L+ +K P
Sbjct: 181 AIKLAQRISGQSLESRRLCNKP-IQSLPNMD---------EIFSEALLKMRKQHPGCLSQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+ C+ ++ + + G+ KE ++F L ++ L + FFA+R +K + K
Sbjct: 231 ETCVRAVQAAVQYPYEVGIKKEEELFMYLQKSGQAQALQYAFFAERKANKWSAPSGASCK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+ + V V+G G MG GI + I V+ E++ K ++T + + ++ +
Sbjct: 291 TASAQPISSVGVVGLGTMGRGIVISFAKAKIPVIAVELDK----KQLETADGIITSVLEK 346
Query: 362 GKLTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+++ K L S E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 347 EASKMQHSSHHWSGPKPRLTTSMKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPETFL 406
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
TNTST+D++ + T +IG HFFSPAH+M LLEI+ ++ +S I +M + K I
Sbjct: 407 CTNTSTLDIDEIASSTDRPHLVIGTHFFSPAHIMRLLEIIPSQYSSLTTIATVMNLSKKI 466
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
KK+ VVVGNC GF NR Y + L+ G ID + FG IGPF+
Sbjct: 467 KKIGVVVGNCKGFVGNRMLKHYYNQSYFLLEEGSKPEEIDQVLEEFGFKIGPFR 520
>gi|300936924|ref|ZP_07151809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
21-1]
gi|432680960|ref|ZP_19916334.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE143]
gi|300457963|gb|EFK21456.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
21-1]
gi|431220357|gb|ELF17737.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE143]
Length = 714
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 283/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V++K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVIIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|432875981|ref|ZP_20094141.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE154]
gi|431420253|gb|ELH02585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE154]
Length = 714
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|121281866|gb|ABM53499.1| putative enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA
dehydrogenase PaaC [uncultured bacterium CBNPD1 BAC
clone 67]
Length = 708
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 281/529 (53%), Gaps = 24/529 (4%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+ V DG VA++ + NPPVNA + + L D + A S + AI++ G G F+ G D
Sbjct: 21 LRVWRDGEVAVLEIDNPPVNATSQAVRRALFDAVQRAQSEPETLAILICGAGRTFTAGGD 80
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I+ F K +PD+ +N IE+ KPIV A G ALGGG E+ +G H RI A
Sbjct: 81 ISEFGK---PPREPHLPDL-----INRIEESAKPIVVAWHGTALGGGCEIGLGAHKRIIA 132
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
+GLPE+ LG++PG GGTQRLPRLVG A++++ + + ++E +LGL+DA+
Sbjct: 133 KDGFVGLPEVKLGLLPGAGGTQRLPRLVGPVAALDLIASGRMVGAQEALRLGLVDAIARK 192
Query: 187 E---ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
+ E ++++R + + +P + SL T + V K+ R AP
Sbjct: 193 DLRAEAIELAR----GLIGQMQPRL-SLRATPAAEPEAWQAMVAKVNREARGCIAP---- 243
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
Q ++++ + + +G E + F EL+ + SRGL H+F A+R K P + +
Sbjct: 244 -QRAIELVSQSLTLPFSTGQPNERRTFFELMNSEQSRGLRHLFLAEREAGKRPELASV-- 300
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
PR + ++ +IG G MGSGIA A + V+L E + L G++ + + G+
Sbjct: 301 PPRDLHQIGIIGAGTMGSGIAVAFLDAGYKVMLVEADDTALQAGLERVNGLYLRSIRSGR 360
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ ++ N L L + S D+VIEA+ E + +K ++ +L P ++ATNT
Sbjct: 361 IDENTRLNRLSNLVPTTEMSRLAACDLVIEAIFEDLGVKLELMKKLATLLPASTLIATNT 420
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +DL + + + +R +G HFFSPAHVM LLEIVR RT + + + +G+ +KK+
Sbjct: 421 SYLDLEPMADALPAPERFLGLHFFSPAHVMKLLEIVRARRTGLEALSTALAIGRKLKKIA 480
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V+ G C GF NR + ++ G ID+A+ +FGL +GPF
Sbjct: 481 VISGVCEGFIGNRILAKFRAQCEFMLEEGALPREIDAAMEAFGLAMGPF 529
>gi|33597294|ref|NP_884937.1| enoyl-CoA isomerase [Bordetella parapertussis 12822]
gi|33573721|emb|CAE38018.1| Putative enoyl-CoA isomerase [Bordetella parapertussis]
Length = 694
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 271/521 (52%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRCKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIARADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA MPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPAMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|417139094|ref|ZP_11982621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0259]
gi|386157739|gb|EIH14079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0259]
Length = 714
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432398215|ref|ZP_19640995.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
gi|432407394|ref|ZP_19650103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
gi|432723790|ref|ZP_19958710.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
gi|432728377|ref|ZP_19963256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
gi|432742071|ref|ZP_19976790.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
gi|432895356|ref|ZP_20107076.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE165]
gi|432991378|ref|ZP_20180042.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE217]
gi|433111589|ref|ZP_20297454.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE150]
gi|430915072|gb|ELC36159.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
gi|430930153|gb|ELC50662.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
gi|431266344|gb|ELF57906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
gi|431274066|gb|ELF65140.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
gi|431283762|gb|ELF74621.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
gi|431421723|gb|ELH03935.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE165]
gi|431495460|gb|ELH75046.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE217]
gi|431628893|gb|ELI97269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE150]
Length = 714
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 283/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|311109839|ref|YP_003982690.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
gi|310764528|gb|ADP19975.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
Length = 669
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 285/518 (55%), Gaps = 25/518 (4%)
Query: 22 NPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81
NPPVNA + + L + ++ + + A VL G+G F G DI F + VS
Sbjct: 5 NPPVNATSYAVRIALVEGIKKLDTDPTLVAGVLAGSGKTFVAGADIREF-----SDSVSR 59
Query: 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI 141
P + LV++ + C KP+VAA+ G ALGGGLELA+GC ARIA +GLPE+TLG++
Sbjct: 60 QPMLG--LVIDDLMACSKPVVAAIHGFALGGGLELALGCDARIAKRGAIVGLPEVTLGIL 117
Query: 142 PGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201
P GGTQRLPR VGL +A++++ + T+E + GL+D VV + LL+
Sbjct: 118 PAAGGTQRLPRCVGLGRAMQLICSGERYTAERALQWGLVDEVV-EDGLLE---------- 166
Query: 202 ARRKPWIRSLHRTDK----LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVH 257
R RS+ T + L +E ++ A Q + + P ++ I+
Sbjct: 167 -RAIAKARSMQGTKRDLLDLPMPAEEPSAIEAAERQVLRAGKHRPAVVTAIESIKNAARL 225
Query: 258 GGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGG 317
G+ E + F+EL + + GL H FFA+R + KVP + G+ PR V+ VAVIG G
Sbjct: 226 PKQDGLQAERRYFQELRLTPDAFGLRHQFFAERESLKVPALA--GVAPRPVQTVAVIGAG 283
Query: 318 LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 377
MG+GIA + + + V+L E + L +G + I+A+ V GK Q +A+ +L L
Sbjct: 284 TMGTGIAISALQAKLDVILLERDEAALQRGHERIQAHYAQRVAAGKTDQAQADQSLARLS 343
Query: 378 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 437
+D+++ D+VIEAV E + +KQ++F +++ P +LATNTS +D++ + + TS
Sbjct: 344 ATVDWTQVARADLVIEAVFEQLEVKQEVFRIIDRHARPGAVLATNTSYLDVDKIAQATSR 403
Query: 438 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497
++G HFFSPA+VM LLE+VR ++ V+ M +GK + K PV+ GN GF NR
Sbjct: 404 PQDVLGLHFFSPANVMKLLEVVRGAHSAPDVLATGMALGKRLGKSPVLCGNAFGFVGNRI 463
Query: 498 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
+ Y Q L++ G +D A+ FG +GPF G
Sbjct: 464 YNVYRQQCELMLEDGAWPETVDQALEQFGFAMGPFSVG 501
>gi|432441834|ref|ZP_19684174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE189]
gi|432446950|ref|ZP_19689249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE191]
gi|433014604|ref|ZP_20202951.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE104]
gi|433024223|ref|ZP_20212210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE106]
gi|433323812|ref|ZP_20401143.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli J96]
gi|430966288|gb|ELC83696.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE189]
gi|430973223|gb|ELC90191.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE191]
gi|431530335|gb|ELI07016.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE104]
gi|431535295|gb|ELI11676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE106]
gi|432347910|gb|ELL42367.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli J96]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|301024178|ref|ZP_07187886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
69-1]
gi|419920497|ref|ZP_14438612.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD2]
gi|432816094|ref|ZP_20049878.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE115]
gi|300396665|gb|EFJ80203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
69-1]
gi|388384677|gb|EIL46392.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD2]
gi|431364318|gb|ELG50862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE115]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|254447746|ref|ZP_05061211.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
gi|198262526|gb|EDY86806.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
Length = 766
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 284/538 (52%), Gaps = 17/538 (3%)
Query: 8 MEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
+ V +D V +I IN P N L + D ++ + +K +VL + G F
Sbjct: 59 LRVRDDKVGVIE-INVPGEAQNTLKAEFAEQMDDVMDQVRRQAGLKGLVLISTKPGSFVA 117
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+F + +V + + IED P+VAA+EG LGGGLELAM CH R
Sbjct: 118 GADINLFDSIGSKQEVVELSK-TCHRGFKAIEDLNIPVVAAIEGACLGGGLELAMACHYR 176
Query: 124 IAAPK--TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ + T LG+PE+ LG++P GGTQRLPRLVG+ A+++ML S+ + ++ K+GLID
Sbjct: 177 VASSRSNTALGVPEVMLGLLPAGGGTQRLPRLVGIPAALDLMLTSRQLKPKQALKMGLID 236
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE------VLKLARLQA- 234
+V SE L + + AL A R L + + L L+ + V AR QA
Sbjct: 237 QIVGSEALEERAVALALKSTAPRPAKSMELSQ-EALQELALEKNPVGRKVVFDQARKQAA 295
Query: 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294
KKT N P + + +E+G HG +G +EA+ F +L M D S+ L +F A A K
Sbjct: 296 KKTYGNYPAPERIIGAVEKGFSHGIEAGYEEEAQAFGDLAMSDVSKQLRGIFHATNALKK 355
Query: 295 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 353
V D ++ R + +V V+G GLMG+GIA + + V LK+ +++ L G+ +
Sbjct: 356 ETFVADESVETRTIERVGVLGAGLMGAGIALNTVAKAKLPVRLKDRDAKGLSHGVGYVAK 415
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
G ++Q A A + + Y+ FK +D+V+EAV E + LK ++ + E
Sbjct: 416 YYDKRAKLGAMSQFDAEAAKRQVTYTDQYTGFKRLDLVVEAVFEDLGLKHQMLKDTEANG 475
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
+ I A+NTS+I ++ + + + +IG H+FSP MPLLEI+ T++T+ +V +
Sbjct: 476 NENTIFASNTSSIPISDIAKAAKRPENVIGLHYFSPVEKMPLLEIITTDKTAPEVTKGCV 535
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
GK K +VV + GF R PY A L+ GV +D A++ FG P+GP
Sbjct: 536 AFGKAQGKTVIVVKDGPGFYTTRILAPYLNEASRLLLEGVGPKELDKALQQFGYPVGP 593
>gi|416898407|ref|ZP_11927971.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_7v]
gi|417115680|ref|ZP_11966816.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2741]
gi|422799647|ref|ZP_16848146.1| fatty oxidation complex [Escherichia coli M863]
gi|323967782|gb|EGB63194.1| fatty oxidation complex [Escherichia coli M863]
gi|327252611|gb|EGE64270.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_7v]
gi|386141099|gb|EIG82251.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2741]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 283/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRTIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEELARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ +KLGL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAFKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLE----SAVELAKQDRLSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQKMVAEVEENCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + S +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEIIPHTGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|215487553|ref|YP_002329984.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O127:H6 str. E2348/69]
gi|312967642|ref|ZP_07781857.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2362-75]
gi|417756602|ref|ZP_12404677.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2B]
gi|418997531|ref|ZP_13545125.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1A]
gi|419002892|ref|ZP_13550419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1B]
gi|419008585|ref|ZP_13556016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1C]
gi|419014269|ref|ZP_13561619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1D]
gi|419019267|ref|ZP_13566574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1E]
gi|419024770|ref|ZP_13571996.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2A]
gi|419029809|ref|ZP_13576972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2C]
gi|419035504|ref|ZP_13582590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2D]
gi|419040497|ref|ZP_13587525.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2E]
gi|254788663|sp|B7UFZ8.1|FADJ_ECO27 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|215265625|emb|CAS10028.1| fused enoyl-CoA hydratase and epimerase
andisomerase/3-hydroxyacyl-CoA dehydrogenase
[Escherichia coli O127:H6 str. E2348/69]
gi|312287839|gb|EFR15744.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2362-75]
gi|377843358|gb|EHU08398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1A]
gi|377844103|gb|EHU09140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1C]
gi|377847771|gb|EHU12769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1B]
gi|377857122|gb|EHU21977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1D]
gi|377860321|gb|EHU25147.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1E]
gi|377863554|gb|EHU28359.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2A]
gi|377874018|gb|EHU38649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2B]
gi|377877991|gb|EHU42580.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2C]
gi|377879860|gb|EHU44432.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2D]
gi|377890537|gb|EHU54994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2E]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASSEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|419914600|ref|ZP_14432993.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD1]
gi|388386129|gb|EIL47786.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD1]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|432466550|ref|ZP_19708638.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE205]
gi|432584594|ref|ZP_19820987.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
gi|433073590|ref|ZP_20260243.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE129]
gi|433120937|ref|ZP_20306609.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE157]
gi|433184063|ref|ZP_20368311.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
gi|430993356|gb|ELD09710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE205]
gi|431115590|gb|ELE19088.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
gi|431587494|gb|ELI58868.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE129]
gi|431642538|gb|ELJ10261.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE157]
gi|431705950|gb|ELJ70538.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
Length = 714
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|331647998|ref|ZP_08349090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
gi|331043722|gb|EGI15860.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
Length = 720
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|407779694|ref|ZP_11126947.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
gi|407298464|gb|EKF17603.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
Length = 690
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 274/523 (52%), Gaps = 17/523 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+I L NPPVNAL + A L E A + + V+ IV+ G F G DI+ F
Sbjct: 10 EDGVAVIVLDNPPVNALGHALRAPLFAALEAAKADEAVQGIVIACAGRTFVAGADISEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ ++ L+E +KP VAA+ G ALGGGLELA+GCH R+A +
Sbjct: 69 -----GKPPLEP--SLPDLIALLESIEKPTVAAIHGTALGGGLELALGCHYRVADRAAMI 121
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GGT RLPRLVG A+ +++ K + E+ LG +DAV + L+
Sbjct: 122 GLPEVNLGLIPGAGGTVRLPRLVGPEAALGIIVSGKPVGMEKAQALGAVDAVADGD--LR 179
Query: 192 VSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ + L A P R +KL +A E A A K A + +
Sbjct: 180 AAAMAFLRAKIAEDGPHRHIRARDEKLAVDLDAFEA---AVADATKKARGLTAPLTAAEA 236
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVR 309
+ I + +E ++F E S H+FFA R +KVP + D +P +
Sbjct: 237 VRNAITMAFDDALARERELFLERRDSLESAAQRHLFFATREATKVPGIARDTQARP--IE 294
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
K AVIG G MG+GIA A I V L E+N+E L +G+ I+ G V RG + +
Sbjct: 295 KAAVIGAGTMGAGIAMALANGGIEVRLLELNAEALERGLGQIDKTYAGSVKRGSIDAAEK 354
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L + G DY+ D D+ IEAV E + +K K+F L+K P ILA+NTS +DL+
Sbjct: 355 EARLARISGTTDYAALSDCDIAIEAVFEDMGVKHKVFGALDKVMKPGAILASNTSYLDLD 414
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ T ++G HFFSPAHVM LLEIVR + T+ +V+ + + + I KVPVVVG C
Sbjct: 415 EIAASTGRPQDVVGLHFFSPAHVMRLLEIVRGDHTAPEVLASALALARRIGKVPVVVGVC 474
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR + L+ G ++D FG P+GPF
Sbjct: 475 NGFVGNRMLAARREENESLLLSGATPEQVDRVFADFGWPMGPF 517
>gi|222157091|ref|YP_002557230.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
gi|387617698|ref|YP_006120720.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O83:H1 str. NRG 857C]
gi|222034096|emb|CAP76837.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
gi|312946959|gb|ADR27786.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O83:H1 str. NRG 857C]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 281/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|339017906|ref|ZP_08644052.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acetobacter tropicalis
NBRC 101654]
gi|338753021|dbj|GAA07356.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acetobacter tropicalis
NBRC 101654]
Length = 683
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 284/521 (54%), Gaps = 19/521 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++T+ NPPVNAL+ + L E V A+VLTG G+F G DI
Sbjct: 4 HDKIAVVTIDNPPVNALSDTVRESLLHMLRELAEDPTVAAVVLTGQNGQFVAGADIREMS 63
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +P+V V I+ KKPI+AA++G ALGGGLELA+ C R+ ++++
Sbjct: 64 RPPAQ---PFLPEV-----VAAIDAMKKPILAAIDGAALGGGLELALACDLRVGTERSRV 115
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE LGVIPG GGTQRLPRL G++ A+E++ +K I+ +E +L ++DA++ + +L
Sbjct: 116 GLPETKLGVIPGAGGTQRLPRLTGVATALEVIGSAKIISGKEALRLSILDALMPEDRML- 174
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + AL A P R S ++ ++ K + L+ K A + + +
Sbjct: 175 -TDVIAL---AENTPKRRLSEHDVPCASKTDVQDAEK-STLKRAKGATAVLEAVRVVKAA 229
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 311
E + G S E + F L D ++ L ++F A+RAT ++ + +PR ++
Sbjct: 230 ETELFAQGLS---LEREAFLRLRESDEAKALRYLFLAERATGRL--LASEKAQPRHFSRI 284
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
VIGGG MG+GIA + VV+ E ++ + K I + + ++++++A
Sbjct: 285 GVIGGGTMGAGIAVTTADAALNVVIIERDAAAVAACQKRIASLYAKQIETKRISEEEAER 344
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
K ++ ++ K+VD VIEA ES+ +K+ IF L K H ++ATNTS +DL+ +
Sbjct: 345 RFKKIQISHEWDALKNVDFVIEAAFESMEVKENIFRSLNKVVQAHTVVATNTSYLDLDAI 404
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ ++G HFFSPAH+M L+E++R +T+ + + +G+ I+K+PVV G
Sbjct: 405 AGCAERPENVLGLHFFSPAHIMRLVEVIRGAKTTPDALATAIALGRKIQKLPVVATVGEG 464
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR F Y + A L+ GV ID A++S+G +GPF
Sbjct: 465 FIGNRIFSHYRKHAEYLMEDGVSPQEIDQAMQSYGFAMGPF 505
>gi|306814548|ref|ZP_07448710.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli NC101]
gi|432382078|ref|ZP_19625021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
gi|432387891|ref|ZP_19630779.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
gi|432514641|ref|ZP_19751864.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE224]
gi|432612198|ref|ZP_19848360.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
gi|432646911|ref|ZP_19882700.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
gi|432656493|ref|ZP_19892196.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
gi|432699770|ref|ZP_19934923.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE169]
gi|432746382|ref|ZP_19981047.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
gi|432905629|ref|ZP_20114464.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE194]
gi|432938725|ref|ZP_20136968.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE183]
gi|432972541|ref|ZP_20161408.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE207]
gi|432986098|ref|ZP_20174820.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE215]
gi|433039338|ref|ZP_20226937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE113]
gi|433083297|ref|ZP_20269753.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE133]
gi|433101884|ref|ZP_20287970.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE145]
gi|433144937|ref|ZP_20330079.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE168]
gi|433189122|ref|ZP_20373220.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
gi|305851942|gb|EFM52394.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli NC101]
gi|430906090|gb|ELC27696.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
gi|430907553|gb|ELC29051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
gi|431041397|gb|ELD51898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE224]
gi|431148372|gb|ELE49663.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
gi|431179566|gb|ELE79458.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
gi|431190359|gb|ELE89758.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
gi|431242746|gb|ELF37136.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE169]
gi|431290920|gb|ELF81443.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
gi|431432143|gb|ELH13915.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE194]
gi|431462711|gb|ELH42918.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE183]
gi|431482043|gb|ELH61750.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE207]
gi|431499563|gb|ELH78584.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE215]
gi|431551438|gb|ELI25424.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE113]
gi|431601421|gb|ELI70937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE133]
gi|431619478|gb|ELI88402.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE145]
gi|431660914|gb|ELJ27771.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE168]
gi|431705828|gb|ELJ70418.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|417708387|ref|ZP_12357420.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
VA-6]
gi|420364044|ref|ZP_14864927.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
4822-66]
gi|333001487|gb|EGK21055.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
VA-6]
gi|391293707|gb|EIQ51966.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
4822-66]
Length = 712
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|24113713|ref|NP_708223.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 2a str. 301]
gi|30063762|ref|NP_837933.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 2a str. 2457T]
gi|74312856|ref|YP_311275.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sonnei Ss046]
gi|383179315|ref|YP_005457320.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sonnei 53G]
gi|384543995|ref|YP_005728058.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
2002017]
gi|414576963|ref|ZP_11434145.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3233-85]
gi|415844373|ref|ZP_11524115.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
gi|415853520|ref|ZP_11529496.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
str. 2457T]
gi|417713399|ref|ZP_12362365.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-272]
gi|417718240|ref|ZP_12367138.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-227]
gi|417723955|ref|ZP_12372759.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-304]
gi|417729271|ref|ZP_12377969.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-671]
gi|417734462|ref|ZP_12383113.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2747-71]
gi|417744224|ref|ZP_12392750.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2930-71]
gi|418257334|ref|ZP_12881002.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
6603-63]
gi|418266751|ref|ZP_12886232.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
Moseley]
gi|420321245|ref|ZP_14823074.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2850-71]
gi|420332311|ref|ZP_14833966.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-1770]
gi|420342670|ref|ZP_14844143.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-404]
gi|420359425|ref|ZP_14860399.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3226-85]
gi|81724310|sp|Q83QQ0.1|FADJ_SHIFL RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|123773483|sp|Q3YZM2.1|FADJ_SHISS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|24052784|gb|AAN43930.1| putative enzyme [Shigella flexneri 2a str. 301]
gi|30042017|gb|AAP17743.1| putative enzyme [Shigella flexneri 2a str. 2457T]
gi|73856333|gb|AAZ89040.1| putative enzyme [Shigella sonnei Ss046]
gi|281601781|gb|ADA74765.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
2002017]
gi|313651171|gb|EFS15570.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
str. 2457T]
gi|323168485|gb|EFZ54165.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
gi|332755396|gb|EGJ85760.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-671]
gi|332756536|gb|EGJ86887.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2747-71]
gi|332766165|gb|EGJ96375.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2930-71]
gi|333002714|gb|EGK22274.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-272]
gi|333016250|gb|EGK35581.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-304]
gi|333016597|gb|EGK35927.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-227]
gi|391247766|gb|EIQ07012.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2850-71]
gi|391250352|gb|EIQ09574.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-1770]
gi|391265743|gb|EIQ24710.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-404]
gi|391282106|gb|EIQ40743.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3226-85]
gi|391284716|gb|EIQ43311.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3233-85]
gi|397896956|gb|EJL13367.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
6603-63]
gi|397899576|gb|EJL15950.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
Moseley]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432554428|ref|ZP_19791150.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
gi|433198978|ref|ZP_20382878.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
gi|431083474|gb|ELD89650.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
gi|431720991|gb|ELJ84992.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|432358683|ref|ZP_19601908.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
gi|430876925|gb|ELC00391.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGVAQGTSSGYDAEARAFGELAMTPQSQALHNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|422974370|ref|ZP_16976280.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
gi|371595749|gb|EHN84596.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ P+T LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPRTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A +++ KT
Sbjct: 187 DVVPQSILLEV----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVSKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGISHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417828770|ref|ZP_12475321.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
J1713]
gi|335574625|gb|EGM60943.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
J1713]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432675446|ref|ZP_19910905.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE142]
gi|431213981|gb|ELF11836.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE142]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTKHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|218690500|ref|YP_002398712.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli ED1a]
gi|419701173|ref|ZP_14228775.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SCI-07]
gi|422379520|ref|ZP_16459715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
57-2]
gi|432733074|ref|ZP_19967906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
gi|432760159|ref|ZP_19994653.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
gi|254788658|sp|B7MY16.1|FADJ_ECO81 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218428064|emb|CAR08982.2| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli ED1a]
gi|324009263|gb|EGB78482.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
57-2]
gi|380347919|gb|EIA36205.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SCI-07]
gi|431275289|gb|ELF66333.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
gi|431307813|gb|ELF96103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|91211637|ref|YP_541623.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UTI89]
gi|117624529|ref|YP_853442.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O1]
gi|237704820|ref|ZP_04535301.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. 3_2_53FAA]
gi|386600263|ref|YP_006101769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
IHE3034]
gi|386603639|ref|YP_006109939.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UM146]
gi|417085628|ref|ZP_11953034.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli cloneA_i1]
gi|419947329|ref|ZP_14463682.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HM605]
gi|422357918|ref|ZP_16438579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
110-3]
gi|422749617|ref|ZP_16803529.1| fatty oxidation complex [Escherichia coli H252]
gi|422755761|ref|ZP_16809585.1| fatty oxidation complex [Escherichia coli H263]
gi|422837608|ref|ZP_16885581.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
gi|432574417|ref|ZP_19810897.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
gi|432588665|ref|ZP_19825021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
gi|432598325|ref|ZP_19834600.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
gi|432755153|ref|ZP_19989702.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
gi|432779287|ref|ZP_20013520.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
gi|432788225|ref|ZP_20022356.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
gi|432821674|ref|ZP_20055365.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE118]
gi|432827806|ref|ZP_20061457.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE123]
gi|433008378|ref|ZP_20196795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE229]
gi|433164212|ref|ZP_20348950.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE179]
gi|433169317|ref|ZP_20353945.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE180]
gi|123387869|sp|Q1R972.1|FADJ_ECOUT RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|166972670|sp|A1ADI8.1|FADJ_ECOK1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|91073211|gb|ABE08092.1| putative enzyme [Escherichia coli UTI89]
gi|115513653|gb|ABJ01728.1| putative 3-hydroxyacyl-CoA dehydrogenase [Escherichia coli APEC O1]
gi|226901186|gb|EEH87445.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. 3_2_53FAA]
gi|294493788|gb|ADE92544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
IHE3034]
gi|307626123|gb|ADN70427.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UM146]
gi|315288286|gb|EFU47685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
110-3]
gi|323952132|gb|EGB48006.1| fatty oxidation complex [Escherichia coli H252]
gi|323955861|gb|EGB51616.1| fatty oxidation complex [Escherichia coli H263]
gi|355351134|gb|EHG00327.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli cloneA_i1]
gi|371610517|gb|EHN99045.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
gi|388410897|gb|EIL71098.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HM605]
gi|431108015|gb|ELE12179.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
gi|431120998|gb|ELE23996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
gi|431130277|gb|ELE32382.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
gi|431301882|gb|ELF91079.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
gi|431326103|gb|ELG13465.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
gi|431336792|gb|ELG23893.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
gi|431367326|gb|ELG53803.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE118]
gi|431372002|gb|ELG57704.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE123]
gi|431523708|gb|ELI00845.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE229]
gi|431687517|gb|ELJ53068.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE179]
gi|431688169|gb|ELJ53710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE180]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|57110042|ref|XP_545234.1| PREDICTED: peroxisomal bifunctional enzyme [Canis lupus familiaris]
Length = 723
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 192/532 (36%), Positives = 293/532 (55%), Gaps = 35/532 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ G+KD ++AT+ VKAIVL G G+FS G DI+ F +
Sbjct: 11 LALIRLRNPPVNAISTAVLRGIKDGLQKATTDRTVKAIVLCGADGKFSAGADIHSFGEPR 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ D + +V+ I+ +KP+VAA++GLALGGGLELA+GCH RIA + Q+G P
Sbjct: 71 KS-------DFVLGHIVDEIQRTEKPVVAAIQGLALGGGLELALGCHYRIAHAEAQIGFP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPRL+G+ A++++ + + ++E KLG++D +V S EE +K
Sbjct: 124 EVTLGILPGARGTQLLPRLIGVPAALDLITSGRHVLADEALKLGILDEIVNSDPVEEAIK 183
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
++ R+ + +RR KP + SL + A L+ +K P + C
Sbjct: 184 LAQRISDQSLESRRLCNKP----------IQSLPNMESIFSEALLKMQKQHPGCLAPETC 233
Query: 248 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK-- 304
+ ++ VH Y G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 234 VRAVQ-AAVHCPYEVGIQKEKELFMYLQKSGQARALQYAFFAERNATKWSTPSGASWKTA 292
Query: 305 -PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
+ + V V+G G MG GI + I V+ E + K ++T + + L+ +
Sbjct: 293 IAQPISSVGVVGLGTMGRGIVVSLAKAKIPVIAVESDK----KQLETADMIITTLLEKEA 348
Query: 364 LTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
++++ K L S E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 349 SKMQRSSHPSLGPKPRLTTSMKELGGVDLVIEAVFEEINLKKRVFAELSAICKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLEI+ ++ +S I +M + K IKK
Sbjct: 409 NTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKLLEIIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY L+ G ID + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSRPEEIDQVLEEFGFKMGPFR 520
>gi|355685539|gb|AER97768.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mustela putorius furo]
Length = 722
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 294/531 (55%), Gaps = 33/531 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ G+K ++A + VKAIV+ G G+FS G DI+ F
Sbjct: 11 LALIRLRNPPVNAISTAVLHGIKAGLQKALTDHTVKAIVICGADGKFSAGADIHSF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M D+ + VV+ I+ +KP+VAA++GLALGGGLELA+GCH RIA + ++G P
Sbjct: 67 ---GTPRMSDLGLGHVVDEIQRNEKPVVAAIQGLALGGGLELALGCHYRIAHAEARIGFP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPRL+G+ A++++ + I+++E KLG++D +V S EE ++
Sbjct: 124 EVTLGILPGARGTQLLPRLIGVPAALDLITSGRHISADEALKLGILDKMVNSDPVEEAIE 183
Query: 192 -VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
V ++ + +RR KP I+S D + A L+ +K P + C
Sbjct: 184 LVQKISDQPLESRRLCNKP-IQSFPNMDS---------IFNEALLKMRKQHPGCLSQETC 233
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + + G+ KE ++F L +R L +VFFA+R SK + K
Sbjct: 234 VRAIQAAVQYPYEVGIKKEEELFMYLQKSGQARALQYVFFAERNASKWSTPSGASWKTAT 293
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ + V V+G G MG GI TA I V+ E++ K ++T + + L+ +
Sbjct: 294 AQPISSVGVVGLGTMGRGIVTALAKAKIPVIAVELDK----KQLETADQIITSLLEKEAS 349
Query: 365 TQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
++++ K L S E VD+VIEAV E + LK+++F+EL C P L TN
Sbjct: 350 KMQRSSHHWLGPKPRLTTSLKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPEAFLCTN 409
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS ++++ + T +IG HFFSPAH+M LLEI+ ++ +S I +M + K +KK+
Sbjct: 410 TSALNIDEIASSTDRPHLVIGTHFFSPAHIMKLLEIIPSQYSSPTTIATVMNLSKKMKKI 469
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNC GF NR PY L+ G ID + FG +GPF+
Sbjct: 470 GVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSKPEEIDQVLEEFGFKMGPFR 520
>gi|218559253|ref|YP_002392166.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S88]
gi|432363417|ref|ZP_19606583.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
gi|254788662|sp|B7MGV7.1|FADJ_ECO45 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218366022|emb|CAR03766.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli S88]
gi|430886149|gb|ELC09010.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|110806304|ref|YP_689824.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5 str. 8401]
gi|424838703|ref|ZP_18263340.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5a str. M90T]
gi|123048046|sp|Q0T2E6.1|FADJ_SHIF8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|110615852|gb|ABF04519.1| putative enzyme [Shigella flexneri 5 str. 8401]
gi|383467755|gb|EID62776.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5a str. M90T]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-INALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|410631340|ref|ZP_11342017.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410149163|dbj|GAC18884.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 290/537 (54%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V +DGVAI+++ P +N L + + E+ + +K +V ++G F
Sbjct: 15 TLNVRDDGVAILSMDVPGESMNTLKVEFAEQIDAVLEQIKADSSIKGVVVISGKENSFVA 74
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A D + + ++ IED VAA+ G ALGGGLELA+ CH R
Sbjct: 75 GADISMLAACGSAEDATTIAKGGQDMF-QRIEDMSVTFVAAIHGPALGGGLELALACHYR 133
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KTQLGLPE+ LG++PG GGTQRLP+L+ + +A++MML S+ +++ K G++D
Sbjct: 134 VCSDDAKTQLGLPEVQLGLLPGSGGTQRLPKLISVQQAMKMMLTGASVRAKQAKKYGIVD 193
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLARLQ-AK 235
+V LL V A+++A + KP R+ + D +G E V AR Q A
Sbjct: 194 DMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGKFLENTSVGRNLMFNQARKQTAS 248
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + +D IE G+ G G+ EAK F LVM S L +FFA K
Sbjct: 249 KTQGNYPSPELIIDCIETGLSQGFRKGLEVEAKHFGNLVMSSESAALRSLFFATTDMKKE 308
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
V G++P ++KV V+GGGLMG GIA + +K++ SE + IK
Sbjct: 309 TGVQ--GVQPARLKKVGVLGGGLMGGGIAFVTATKAGLPARIKDIRSEGIANAIKYSFDI 366
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ V RG + + + +L G +DYS F D D+VIEAV E + LKQ + +E+E+ C
Sbjct: 367 LNKKVKRGFMQKMAMQKQMALLTGSIDYSGFSDADVVIEAVFEDLTLKQNMVAEVEENCA 426
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I A+NTS+I ++ + K +++IG H+FSP MPL E++ E+TS Q I +
Sbjct: 427 EHTIFASNTSSIPISQIAAKAKRPEQVIGLHYFSPVDKMPLAEVIAHEKTSDQTISTTVE 486
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K P+VV + GF VNR PY A ++ G + ID ++ FG P+GP
Sbjct: 487 LAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEPIDHIDKSLVKFGFPVGP 543
>gi|260772456|ref|ZP_05881372.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
gi|260611595|gb|EEX36798.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
Length = 708
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/476 (34%), Positives = 274/476 (57%), Gaps = 10/476 (2%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + ++ L ED P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAQEAQALATRGQQMFQQL-EDLPFPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ +KLG
Sbjct: 125 DYRVCTDDDKTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAYKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
++DA V LL+V+ + D + +R+ SL + L + R+++ + ++ +K
Sbjct: 185 VVDACVPQSVLLEVALRFVGDNSKKRRQAKPSL-KEKLLANTGLGRKIIFDQASKKTEQK 243
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P +A L+VIE G+ G +G+ +EAK F ELVM + S+ L +FFA T+++
Sbjct: 244 TRGNYPAAKAILEVIEHGLNKGLKAGLEQEAKRFGELVMTNESKALRSIFFA---TTEMK 300
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
+P+ V+ V+V+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 301 KEHGSDAEPKPVKHVSVLGGGLMGAGISHVSVAKAKLPVRIKDVSNDGILNALSYNYGLF 360
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R +++ + N++ L G D+ F+ D+VIEAV E + LKQ++ +++E+ P
Sbjct: 361 EKQRKRKIISKAQLQNSMMQLAGGTDFRGFQQTDVVIEAVFEDLALKQQMVADVEQHAQP 420
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ + + EK + + I+G H+FSP MPL+E++ TS + I ++ +
Sbjct: 421 STIFATNTSSLPIGQIAEKATRPENIVGLHYFSPVEKMPLVEVIPHSTTSPETIATVVAL 480
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K K P+VV + GF VNR PY A ++ G + +ID A+ +FG P+GP
Sbjct: 481 AKKQGKTPIVVKDRAGFYVNRILAPYMNEAANVLMAGETIEKIDKALLNFGFPVGP 536
>gi|193069764|ref|ZP_03050715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E110019]
gi|415815346|ref|ZP_11506866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
LT-68]
gi|419950639|ref|ZP_14466850.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CUMT8]
gi|432968440|ref|ZP_20157355.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE203]
gi|192956966|gb|EDV87418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E110019]
gi|323170387|gb|EFZ56040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
LT-68]
gi|388416470|gb|EIL76357.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CUMT8]
gi|431471557|gb|ELH51450.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE203]
Length = 714
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|374288523|ref|YP_005035608.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
gi|301167064|emb|CBW26643.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
Length = 706
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 288/552 (52%), Gaps = 40/552 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITL---INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN 57
M + R++ E+ + +A + + L + L D+ +E D+K +V +
Sbjct: 1 MESKRISFEI-EESIAYLGFGYNCTKSMTTLDEETLQELSDRLDELHKNKDIKGVVFWSH 59
Query: 58 GGR-FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLEL 116
R F G DIN+ + D + + + + N IED K P +AAV G+ LGGGLEL
Sbjct: 60 KDRCFLAGADINLISSMKTESDGASGAEAG-QTIFNKIEDLKVPTIAAVHGVCLGGGLEL 118
Query: 117 AMGCHARIAAPK--TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG 174
++ C A +A+ T LGLPE+ LG+IPGFGGT RLPR +GL KA++++L K + +++
Sbjct: 119 SLSCKAIVASDDKGTMLGLPEVKLGLIPGFGGTYRLPRKIGLPKALDVILTGKMLKAKKA 178
Query: 175 WKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHR--TDKLGSLSEAREVLKLARL 232
+LGL+ V E + K++ S H +K G L E+ E +
Sbjct: 179 KRLGLVAGVYPKERIKKMA----------------SFHFGGDEKKGGLKESLEHIASDNF 222
Query: 233 QAKKTAPNMPQ----------HQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
AKK + +QA LDV+E GI+ G S + E++ F EL + + S
Sbjct: 223 FAKKIIFQKARESVLKKTKGFYQAPLKILDVMEAGIMKGRSSYLAAESQAFGELCVSEQS 282
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L H+FF K G PR ++K A +G G MG GIA N + ++K++
Sbjct: 283 KNLQHIFFMTETAKKYSGPESSGNLPR-LKKGAALGAGTMGGGIAWLMANNGMAPLMKDL 341
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
E L G K +N G V R ++T+D+ + ++G + Y F+ VD+VIEA++E++
Sbjct: 342 TPEALELGYKQSSSNFMGAVKRKRMTRDEFERKQRSIQGQVGYDGFERVDLVIEAIVENM 401
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
+K+ +FSE+E C++ +NTS++ + + + +R G HFF+P H+MPL+EI+
Sbjct: 402 NIKKSVFSEVETKVRKDCVITSNTSSLSVQEMSTALENPERFAGLHFFNPVHMMPLVEII 461
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
++ + + + L +KK PV+V + GF VNR P+ A L+ GV + ID
Sbjct: 462 THDKVAPETLEALYNWCMKVKKTPVIVKDGPGFLVNRILMPFMNEAGFLLEEGVPMKDID 521
Query: 520 SAIRSFGLPIGP 531
A +FG+P+GP
Sbjct: 522 DACLNFGMPMGP 533
>gi|291283581|ref|YP_003500399.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O55:H7 str. CB9615]
gi|387507726|ref|YP_006159982.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. RM12579]
gi|416819946|ref|ZP_11893533.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. USDA 5905]
gi|419115736|ref|ZP_13660753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5A]
gi|419126908|ref|ZP_13671793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5C]
gi|419137401|ref|ZP_13682197.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5E]
gi|425250062|ref|ZP_18643011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
gi|209764654|gb|ACI80639.1| putative enzyme [Escherichia coli]
gi|290763454|gb|ADD57415.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O55:H7 str. CB9615]
gi|320662940|gb|EFX30264.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. USDA 5905]
gi|374359720|gb|AEZ41427.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. RM12579]
gi|377960330|gb|EHV23814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5A]
gi|377975020|gb|EHV38345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5C]
gi|377984394|gb|EHV47629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5E]
gi|408163920|gb|EKH91767.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
Length = 714
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>gi|419397468|ref|ZP_13938236.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15B]
gi|419407929|ref|ZP_13948618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15D]
gi|419413516|ref|ZP_13954168.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15E]
gi|422762156|ref|ZP_16815913.1| fatty oxidation complex [Escherichia coli E1167]
gi|422777623|ref|ZP_16831275.1| fatty oxidation complex [Escherichia coli H120]
gi|432832359|ref|ZP_20065933.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE135]
gi|323944852|gb|EGB40918.1| fatty oxidation complex [Escherichia coli H120]
gi|324117782|gb|EGC11681.1| fatty oxidation complex [Escherichia coli E1167]
gi|378243589|gb|EHY03535.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15B]
gi|378254308|gb|EHY14172.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15D]
gi|378258948|gb|EHY18764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15E]
gi|431376329|gb|ELG61652.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE135]
Length = 713
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|300928514|ref|ZP_07144040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
187-1]
gi|300463509|gb|EFK27002.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
187-1]
Length = 714
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLDGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432617460|ref|ZP_19853573.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
gi|431153448|gb|ELE54352.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
Length = 714
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G G EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSGGYDAEARAFGELVMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDTALVKFGFPVGPIQ 534
>gi|419931035|ref|ZP_14448626.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-1]
gi|388399288|gb|EIL60090.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-1]
Length = 714
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|419402810|ref|ZP_13943534.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15C]
gi|378247344|gb|EHY07263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15C]
Length = 711
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|309784945|ref|ZP_07679578.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1617]
gi|308927315|gb|EFP72789.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1617]
Length = 714
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT L LPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|419132366|ref|ZP_13677203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5D]
gi|377975329|gb|EHV38650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5D]
Length = 712
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 532
>gi|419392433|ref|ZP_13933245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15A]
gi|378237633|gb|EHX97656.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15A]
Length = 720
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432863027|ref|ZP_20087273.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE146]
gi|431404562|gb|ELG87811.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE146]
Length = 714
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRASSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+EK C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEKNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EIV TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIVPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|331653785|ref|ZP_08354786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
gi|331048634|gb|EGI20710.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
Length = 730
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 280/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 20 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 79
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 80 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 138
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 139 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 198
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 199 GLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 254
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 255 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKD 314
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 315 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 372
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 373 DGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAA 432
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 433 HTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKL 492
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 493 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 550
>gi|426403796|ref|YP_007022767.1| fatty oxidation complex subunit alpha [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425860464|gb|AFY01500.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 717
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 285/534 (53%), Gaps = 13/534 (2%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
G V L+ VN + P++ LK+ EE + KA++ N + F G DI
Sbjct: 13 GEVAVVEFDLVGEKVNKFSTPVMMRLKEVVEE-LKKSSYKAVIFKSNKPKIFIAGADIEE 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ + A + E V++++ED P +AAV G +GGG E + C RIA+
Sbjct: 72 IKSMTKAEEFEAAVKGGQE-VISMVEDLPMPTIAAVNGACMGGGCEFILACDYRIASEDS 130
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
T++GLPE+ LG++PGFGG RLPR++GL A++++L KS+ S++ KLGL+D VV +
Sbjct: 131 STKIGLPEIQLGILPGFGGCIRLPRVIGLQAALDIILAGKSVNSKKALKLGLVDKVVHAN 190
Query: 188 ELLKVSRLWALDI----AARRKPWIRSLHRTDKLGSLSEARE-VLKLARLQA-KKTAPNM 241
L S WA +I A +R+ + + + + R V K AR K T +
Sbjct: 191 LLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVILESALGRSIVFKKAREGVLKATKGHY 250
Query: 242 PQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P L+VI++ L+ E + F +L + D S+ L+HVF+ K VT
Sbjct: 251 PAPLQALEVIQKTYGMSDRDAALRVEREGFCKLGVTDISKNLIHVFYLTEMVKKQNGVTG 310
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+ +KPR V+ + V+G G MG GIA I V +K++N++ L KG+K LV
Sbjct: 311 VDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQVRMKDLNTDALGKGLKHASDLWMKLVK 370
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
R + + + + ++ DY+ FK++D+V+EA++E + +KQK+ E P I+A
Sbjct: 371 RKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEAIVEDMGVKQKVIGECAGQMRPDAIIA 430
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS++ + + + + G HFF+P + MPL+E++R E+TS + I + + K +
Sbjct: 431 TNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMPLIEVIRGEKTSDETIATIYELSKKMG 490
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA-IRSFGLPIGPFQ 533
K+PVVV + GF VNR PY A L+ G+ + +D ++ FG+P+GPF+
Sbjct: 491 KMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMSIEFVDKVYVKEFGMPMGPFE 544
>gi|432370583|ref|ZP_19613669.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
gi|430884795|gb|ELC07730.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
Length = 714
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L V+ ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFVSQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417587359|ref|ZP_12238129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_C165-02]
gi|345336495|gb|EGW68931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_C165-02]
Length = 712
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 532
>gi|218705870|ref|YP_002413389.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UMN026]
gi|293405806|ref|ZP_06649798.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
gi|298381489|ref|ZP_06991088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
FVEC1302]
gi|300897024|ref|ZP_07115502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
198-1]
gi|419932995|ref|ZP_14450269.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 576-1]
gi|422335646|ref|ZP_16416641.1| fatty acid oxidation complex subunit alpha [Escherichia coli
4_1_47FAA]
gi|432354281|ref|ZP_19597554.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
gi|432402632|ref|ZP_19645384.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
gi|432426897|ref|ZP_19669397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE181]
gi|432461362|ref|ZP_19703511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE204]
gi|432476587|ref|ZP_19718585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE208]
gi|432518411|ref|ZP_19755599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE228]
gi|432538533|ref|ZP_19775435.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE235]
gi|432632127|ref|ZP_19868053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
gi|432641842|ref|ZP_19877676.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
gi|432666737|ref|ZP_19902318.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE116]
gi|432771308|ref|ZP_20005643.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
gi|432775433|ref|ZP_20009704.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
gi|432887322|ref|ZP_20101396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE158]
gi|432913520|ref|ZP_20119217.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE190]
gi|432962570|ref|ZP_20152163.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE202]
gi|433019415|ref|ZP_20207630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE105]
gi|433053948|ref|ZP_20241127.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE122]
gi|433063804|ref|ZP_20250725.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE125]
gi|433068653|ref|ZP_20255442.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE128]
gi|433159385|ref|ZP_20344222.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE177]
gi|433179198|ref|ZP_20363596.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
gi|254788655|sp|B7N5V2.1|FADJ_ECOLU RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218432967|emb|CAR13861.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
UMN026]
gi|291428014|gb|EFF01041.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
gi|298278931|gb|EFI20445.1| fatty acid oxidation complex subunit alpha [Escherichia coli
FVEC1302]
gi|300359151|gb|EFJ75021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
198-1]
gi|373243298|gb|EHP62809.1| fatty acid oxidation complex subunit alpha [Escherichia coli
4_1_47FAA]
gi|388414793|gb|EIL74740.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 576-1]
gi|430875454|gb|ELB98996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
gi|430925103|gb|ELC45776.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
gi|430955150|gb|ELC73942.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE181]
gi|430989052|gb|ELD05521.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE204]
gi|431005203|gb|ELD20411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE208]
gi|431051033|gb|ELD60709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE228]
gi|431069422|gb|ELD77751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE235]
gi|431170327|gb|ELE70521.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
gi|431181725|gb|ELE81587.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
gi|431201031|gb|ELE99749.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE116]
gi|431314099|gb|ELG02052.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
gi|431318045|gb|ELG05814.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
gi|431416320|gb|ELG98807.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE158]
gi|431439820|gb|ELH21153.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE190]
gi|431473834|gb|ELH53666.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE202]
gi|431530892|gb|ELI07568.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE105]
gi|431570020|gb|ELI42949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE122]
gi|431581123|gb|ELI53577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE125]
gi|431583725|gb|ELI55720.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE128]
gi|431677617|gb|ELJ43692.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE177]
gi|431700844|gb|ELJ65772.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
Length = 714
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|444377989|ref|ZP_21177194.1| Enoyl-CoA hydratase [Enterovibrio sp. AK16]
gi|443677791|gb|ELT84467.1| Enoyl-CoA hydratase [Enterovibrio sp. AK16]
Length = 707
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 295/534 (55%), Gaps = 18/534 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ G++GVA +++ P +N L V + E S+ D+K +VL + F
Sbjct: 13 SLRYGDNGVAWLSIDVPGESMNTLQASFVDEISAILSELESKSDIKGLVLHSAKPDNFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + + A D + + +L + IE +VAA+ G ALGGGLELA+ CH+R
Sbjct: 73 GADVRMLDACNTAEDAQAIAEHGQKLF-SRIEKLPFHVVAAIHGPALGGGLELALACHSR 131
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ KT+LGLPE+ LG++PG GGTQRLPRL+G+ A++M+L K + +++ K+G++D
Sbjct: 132 VASDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVPGALDMILTGKQLRAKKAKKMGVVD 191
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
VV LL+V A ++A + KP + + +G + R V+ + A+ +KT
Sbjct: 192 DVVPQSVLLRV----AEELALKGKPKRKGSWQDWAMGGNALGRSVMFDQAAKKTREKTRG 247
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P +A L+VI+ G+ G G+ EAK F ELVM S L +FFA A K T
Sbjct: 248 NYPATEAILEVIKYGLDKGVEKGLALEAKRFGELVMSSESAALRSIFFATTAMKKE---T 304
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
PR V V V+GGGLMG+GIA N V +K+V+++ +L + +
Sbjct: 305 GADADPRTVTGVTVLGGGLMGAGIANVSATKANTPVRVKDVSNDGILNAMAYSYKLLDKK 364
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
R +++ + + + G DYS ++V+EAV E + LK ++ +E+E+ I
Sbjct: 365 RKRRIISKAEMQKQMDRISGTTDYSGMSRNNVVVEAVFEDLKLKHQMVAEVEENLAEDTI 424
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
ATNTS++ ++ + E + I+G H+FSP MPL+E++ TS + + ++ + K
Sbjct: 425 FATNTSSLPIHQIAEGAKRPENIVGLHYFSPVDKMPLVEVIPHAGTSEEAVATVVKLAKK 484
Query: 479 IKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K P+VV + GF VNR PY +++AR L+S G V ID+A+ FG P+GP
Sbjct: 485 QGKTPIVVADKAGFYVNRILAPYMNEAARTLLS-GESVEHIDNALLDFGFPVGP 537
>gi|417163609|ref|ZP_11998797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0741]
gi|386172834|gb|EIH44848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0741]
Length = 713
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 286/535 (53%), Gaps = 16/535 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPGSD 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
P + V ++GGGLMG GIA + V +K++N + + +K + G
Sbjct: 303 ---APPALLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|89053167|ref|YP_508618.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Jannaschia sp. CCS1]
gi|88862716|gb|ABD53593.1| 3-hydroxyacyl-CoA dehydrogenase [Jannaschia sp. CCS1]
Length = 687
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 275/532 (51%), Gaps = 48/532 (9%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
+TL NP VNA+ + GL D A + + IV + ++ GA
Sbjct: 13 FVTLDNPSVNAIGRAMREGLMDAVAWAETEMLDRVIVTGAGRAFAA----GADAKEFDGA 68
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
+PDV ++ IE P +AA+ G+ALGGG E+A+ C RI P+ Q+GLPE+
Sbjct: 69 ALEPYLPDV-----LDAIERSFVPWIAAINGVALGGGAEIALACRMRIMGPRAQIGLPEV 123
Query: 137 TLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV----------VTS 186
TLGVIPG GGTQR RL GL A+EM+ K + ++ GL+ AV V S
Sbjct: 124 TLGVIPGAGGTQRAMRLCGLDTALEMIAYGKPLGAKAALATGLVHAVEEDPVDAADMVNS 183
Query: 187 EELLKVSRLWAL---DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243
EELL + W L D+ A D + E LA+ + AP
Sbjct: 184 EELLCIVPTWELPAPDMNA------------DAFAKIREG-----LAKRSKGQVAP---- 222
Query: 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 303
++VIE G+ + E F EL D SR L H+FF++RA +K PN D+
Sbjct: 223 -LKAVEVIEAGLSMEFADAMALERAAFLELKAGDQSRALRHMFFSERA-AKAPN--DLPK 278
Query: 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
P + K+A++GGG MG+GIA A + + VVL E +++ + + I+ + + RG+
Sbjct: 279 APE-ISKIAIVGGGTMGAGIAYACLSVGLPVVLLETDADAIARAQHNIDTLIGAGLKRGR 337
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
L A L DY+ D +VIEA ES+ +K+ IF++L+ A P +LATNT
Sbjct: 338 LDDSGAAALRDRLTLTEDYAAASDATLVIEAAFESMDVKKDIFAKLDAAVSPDTVLATNT 397
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++++ T RI+G HFF+PAH+M LLEIV TS + + + K++KKVP
Sbjct: 398 SYLDVDVLAASTRDPSRILGLHFFAPAHIMRLLEIVTGAETSDRALATGYALAKLLKKVP 457
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
V+ G C GF NR F Y + A +L+ G + +D A+ +FG +GPF+ G
Sbjct: 458 VLAGVCDGFIGNRIFSRYKEEADILLMDGAVPWEVDDAMEAFGYAMGPFEVG 509
>gi|291400311|ref|XP_002716515.1| PREDICTED: enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase-like [Oryctolagus cuniculus]
Length = 723
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 293/531 (55%), Gaps = 29/531 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+ +A+I L NPPVNA+++ +++G+ + ++A + VKAIV+ G GG FS G DI+ FQ
Sbjct: 9 NSLALIRLRNPPVNAISLAVLSGISEGLKKAVTDHTVKAIVICGAGGNFSAGADIHSFQA 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+G + + +V+ + +KP+VAA++G+ALGGGLELA+GCH RIA + ++G
Sbjct: 69 PRNSG-------LGLGHLVDELSRNEKPVVAAIQGVALGGGLELALGCHYRIAHAQARVG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 189
LPE+TLG++PG GTQ LPRL+G+ A++++ + I++ + KLG++D VV S EE
Sbjct: 122 LPEVTLGLLPGGRGTQLLPRLIGVPAALDLITSGRHISAGDAHKLGILDEVVNSDPTEEA 181
Query: 190 LKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+K + R+ + +RR KP ++SL D + A ++ +K P +
Sbjct: 182 IKFAQRVLGQPLESRRLCNKP-VQSLPNMDT---------IFSDAFVKMRKQYPGCLAPE 231
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK- 304
C+ I+ + + G+ +E ++F L +R L + FFA++ +K + K
Sbjct: 232 TCVRAIQAAVKYPYTVGIKEEEELFMYLRESGQARALQYAFFAEKNANKWSTPSGASWKT 291
Query: 305 --PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
R + V V+G G MG GIA + I V+ E + + L + I + + +
Sbjct: 292 ASARPISSVGVLGLGTMGRGIAISFARAKIPVIAVESDKKQLEAANRVITSILEKEAS-- 349
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
K+ Q ++ + E VD+V+EAV E + LK+++F+EL C P L TN
Sbjct: 350 KMQQSGHPGSVPKPRLTSSLKELSGVDLVVEAVFEDMALKKQVFAELSAVCKPEAFLCTN 409
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKKV
Sbjct: 410 TSALDVDEIASSTDRPHMVIGTHFFSPAHVMRLLEVIPSKYSSPTTIATVMNLSKRIKKV 469
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNC GF NR PY L+ G ID + FG +GPF+
Sbjct: 470 GVVVGNCHGFVGNRMLRPYYDQTYFLLEDGSKPEEIDQVLEEFGFKMGPFR 520
>gi|432392856|ref|ZP_19635686.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
gi|430918012|gb|ELC39051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQGRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQTLRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|153006999|ref|YP_001381324.1| multifunctional fatty acid oxidation complex subunit alpha
[Anaeromyxobacter sp. Fw109-5]
gi|152030572|gb|ABS28340.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Anaeromyxobacter sp.
Fw109-5]
Length = 723
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 298/533 (55%), Gaps = 17/533 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA + L P VN + V + D VK +V T F G I++
Sbjct: 21 DGVATLFLDEPGESVNVVEPGAVEEFFRLLDGFAGDDAVKGVVFTSGKDGFIAGAKIDLI 80
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PK 128
Q V A + + ++ ++ +E +KP+VAA++G ALGGGLE A+ CH RIA PK
Sbjct: 81 QSVTDAAEAEQLAR-EMQAGLDRLERYRKPVVAAIQGSALGGGLEWALACHYRIATSDPK 139
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
TQLGLPE+ LG+IPG GGTQRLPRLVG+ A++++L K++ +++ K+GL+D VV S+
Sbjct: 140 TQLGLPEVQLGLIPGAGGTQRLPRLVGIQTALDLILAGKTVKAKKALKIGLVDEVVPSQL 199
Query: 189 LLKVSRLWALDIAA---RRKPWIRS--LHRTDKLGSLSEAREVLKLARLQAK-----KTA 238
L+ V+R AL +A RR+P ++ + R ++ +L E R +L QA+ KT
Sbjct: 200 LVSVARQRALALATGKLRREPRRKASPVERATRV-ALEENRVGRELLFRQARKAVLAKTK 258
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
P L+ IE G G G+ KEA++F +L + + +R L+ +FFA A K V
Sbjct: 259 GMYPAPVRALEAIEYGYQKGFAKGLEKEAQLFGQLAVSEVARRLMEIFFATTALKKDTGV 318
Query: 299 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 358
D ++PR R+V V+GGGLMGSGI+ I V ++E + K + ++ A +
Sbjct: 319 DDPAVRPRPARRVGVLGGGLMGSGISFVTANAGIPVRIRERDDAAAGKALGSVRALLDER 378
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R + + + + ++++ D+S + VD++IEAV E + LKQ++ E A P I
Sbjct: 379 VKRRSIDRLERDERMRLVTATTDWSGYAAVDVLIEAVFEDLALKQEMVRAFE-AVNPTGI 437
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS+I + + E ++ + ++G H+FSP MPLLEI+ TE+TS + + +GK
Sbjct: 438 FASNTSSIPITKIAEASAHPETVLGMHYFSPVQKMPLLEIIVTEKTSKEATATAVALGKK 497
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K +VVG+ GF +R PY A L+ G V +D A+ FG P+GP
Sbjct: 498 QGKTVIVVGDGPGFYTSRILAPYMNEAAELLVEGAAVEDLDRALVEFGFPVGP 550
>gi|422370074|ref|ZP_16450468.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
16-3]
gi|432899357|ref|ZP_20110049.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE192]
gi|433029314|ref|ZP_20217173.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE109]
gi|315298179|gb|EFU57443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
16-3]
gi|431427009|gb|ELH09053.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE192]
gi|431543054|gb|ELI18050.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE109]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVCAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAAKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|433005796|ref|ZP_20194224.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE227]
gi|433154460|ref|ZP_20339401.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE176]
gi|431513494|gb|ELH91576.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE227]
gi|431673702|gb|ELJ39893.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE176]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAIHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|417629608|ref|ZP_12279845.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_MHI813]
gi|345372355|gb|EGX04319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_MHI813]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|218700819|ref|YP_002408448.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli IAI39]
gi|386625047|ref|YP_006144775.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O7:K1 str. CE10]
gi|254788659|sp|B7NP24.1|FADJ_ECO7I RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218370805|emb|CAR18618.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI39]
gi|349738784|gb|AEQ13490.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O7:K1 str. CE10]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 282/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|425306070|ref|ZP_18695777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
gi|408228064|gb|EKI51614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + ++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|293415633|ref|ZP_06658276.1| fatty oxidation complex [Escherichia coli B185]
gi|291433281|gb|EFF06260.1| fatty oxidation complex [Escherichia coli B185]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417739185|ref|ZP_12387765.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
4343-70]
gi|332754996|gb|EGJ85361.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
4343-70]
Length = 611
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 286/535 (53%), Gaps = 16/535 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSD 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
P + V ++GGGLMG GIA + V +K++N + + +K + G
Sbjct: 303 ---APPAALNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432851859|ref|ZP_20082015.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE144]
gi|431399648|gb|ELG83047.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE144]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHFKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|398354818|ref|YP_006400282.1| fatty acid oxidation complex subunit alpha [Sinorhizobium fredii
USDA 257]
gi|390130144|gb|AFL53525.1| fatty acid oxidation complex subunit alpha [Sinorhizobium fredii
USDA 257]
Length = 686
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 273/521 (52%), Gaps = 20/521 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ NPPVNAL+ + GL D E + VKA+VL G F G D+ F K
Sbjct: 11 IAVVTVNNPPVNALSQALRQGLFDAAEALDADRSVKAVVLACAGRTFIAGADVGEFGK-- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP +LV IE KP +AA+ G ALGGG E+ +GC R+A +GLP
Sbjct: 69 -----PPMPPHLPDLVAR-IERAAKPWIAAIHGSALGGGFEVTLGCRFRVAVSSASVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GGT RLPRL G+ A++M+ + + + + GLIDAV+ + +
Sbjct: 123 EVRLGIVPGAGGTVRLPRLAGVETAVDMVTTGTPVGARKAHEAGLIDAVIEDDLVAGAVA 182
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEA-REVLKLARLQAKKTAPNMPQHQACLDVIEE 253
+ +P +L R + +++E E K AC+ E
Sbjct: 183 FARAAL---DRPLPDAL-RDRPVAAVAEGFWEAAAKTVAARAKREEAPLSALACVRRAAE 238
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ + E + F L + L HVFFA+ A ++ P + G+ P +R AV
Sbjct: 239 VDFE---TAIAFERETFLALRGSAQAAALRHVFFAECAATRPPELA--GVTPWTIRSAAV 293
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
IGGG MG+GIA A + V+L E + + +G+ + A RG+++ D A + +
Sbjct: 294 IGGGTMGAGIAAALRDAGLPVILVERDDGAVERGLANLRAIFHSAAKRGRISTDAAADRM 353
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+ G DY+ DVD+VIEAV E + +K+ +F+ L AC + ILATNTS +D + E
Sbjct: 354 AGITGTTDYAALSDVDLVIEAVFEDLDVKRDVFARLAAACRDNAILATNTSYLDPERIAE 413
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
+R +G HFFSPA +M LLEI+ T ++ V+ + +++ K+PV G C GF
Sbjct: 414 GIRRPERFLGLHFFSPAQMMKLLEIIPTRASAPAVVAAGFALARMLNKIPVRAGICDGFI 473
Query: 494 VNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR +Q+ RLL+S G +D+A+R+FGLP+GPF+
Sbjct: 474 GNRILKVTRAQAERLLLS-GATPPAVDAAMRAFGLPMGPFE 513
>gi|332278508|ref|ZP_08390921.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sp. D9]
gi|332100860|gb|EGJ04206.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sp. D9]
Length = 714
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELEMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432450494|ref|ZP_19692758.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE193]
gi|433034173|ref|ZP_20221888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE112]
gi|430979477|gb|ELC96253.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE193]
gi|431550559|gb|ELI24549.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE112]
Length = 714
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPAEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQKLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLVLISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|397659223|ref|YP_006499925.1| enoyl-CoA hydratase [Klebsiella oxytoca E718]
gi|394347427|gb|AFN33548.1| Enoyl-CoA hydratase [Klebsiella oxytoca E718]
Length = 714
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 278/537 (51%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLQT----AIELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 356
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + + + ++ G LDY F D+VIEAV E++ LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFENLTLKQKMVSEVEQHCRPE 417
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|422834500|ref|ZP_16882561.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
gi|371601292|gb|EHN90042.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
Length = 714
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLEL + CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELVLACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|386281410|ref|ZP_10059072.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
4_1_40B]
gi|432692317|ref|ZP_19927545.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE161]
gi|386121549|gb|EIG70164.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
4_1_40B]
gi|431226665|gb|ELF23824.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE161]
Length = 714
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA +K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVTKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|427805477|ref|ZP_18972544.1| putative enzyme [Escherichia coli chi7122]
gi|427810037|ref|ZP_18977102.1| putative enzyme [Escherichia coli]
gi|443618415|ref|YP_007382271.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O78]
gi|412963659|emb|CCK47584.1| putative enzyme [Escherichia coli chi7122]
gi|412970216|emb|CCJ44860.1| putative enzyme [Escherichia coli]
gi|443422923|gb|AGC87827.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O78]
Length = 714
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|407686989|ref|YP_006802162.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290369|gb|AFT94681.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 713
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 294/539 (54%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H R+ +P TQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 234
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDEVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 235 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGP 541
>gi|420326498|ref|ZP_14828249.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
CCH060]
gi|391250015|gb|EIQ09238.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
CCH060]
Length = 714
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>gi|82544822|ref|YP_408769.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella boydii Sb227]
gi|417682956|ref|ZP_12332309.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
3594-74]
gi|420353732|ref|ZP_14854839.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
4444-74]
gi|123728354|sp|Q31YB7.1|FADJ_SHIBS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|81246233|gb|ABB66941.1| putative enzyme [Shigella boydii Sb227]
gi|332093640|gb|EGI98698.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
3594-74]
gi|391277867|gb|EIQ36592.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
4444-74]
Length = 714
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>gi|188496359|ref|ZP_03003629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
53638]
gi|188491558|gb|EDU66661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
53638]
Length = 714
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGKRVEHIDAALVKFGFPVGPIQ 534
>gi|387608028|ref|YP_006096884.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
gi|284922328|emb|CBG35413.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
Length = 714
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATECILVVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|170019351|ref|YP_001724305.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli ATCC 8739]
gi|189044422|sp|B1IXA5.1|FADJ_ECOLC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|169754279|gb|ACA76978.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
ATCC 8739]
Length = 714
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|126727316|ref|ZP_01743151.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Rhodobacterales bacterium HTCC2150]
gi|126703311|gb|EBA02409.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Rhodobacterales bacterium HTCC2150]
Length = 648
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 283/523 (54%), Gaps = 25/523 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
VAI+T+ NPPVNA++ + GL D ++ + +KA ++ F G DI F
Sbjct: 11 VAIVTIENPPVNAISHAVRQGLLDAKQQIEADPAIKAGIIVCADRTFIAGADIREFNTPP 70
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
++ H +PD+ + L E KKP+VAA+ G ALGGGLE+A+GC RIA +
Sbjct: 71 KEPH-------LPDLVIAL-----EGGKKPLVAAIHGTALGGGLEIALGCDYRIAINSAK 118
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
LGLPE+ LG+IPG GGT RL RL+ A+++M+ K ++++ LGLIDA T ++ L
Sbjct: 119 LGLPEVNLGLIPGAGGTVRLTRLISAEPALDIMISGKPVSADRAKNLGLIDA--TCDDDL 176
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ S A+ A R K R ++ A KL AK N P A
Sbjct: 177 QNS---AIAFANRIKDEPRPSQILTRMADYDRAALDKKLTAGAAKARGQNSPV--AVCQA 231
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ I + + E K+F EL S L H+FFA+RATSK+ + + P V +
Sbjct: 232 VRNAIEMSAHDALAAERKLFVELKSDPQSLALRHIFFAERATSKISAIKGVPAAP--VNQ 289
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ +IGGG MG+GIA A +L VV+ E N E L +G+ +A + + RG +TQ K +
Sbjct: 290 IGIIGGGTMGAGIAAACLLAGFDVVMIERNDEALAQGMSRTKATLANSLKRGLITQAKHD 349
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
+ G + Y D D+VIEAV E + +K+ +F L++AC I ATNTS +D++
Sbjct: 350 RLIAAFTGSISYIALADADLVIEAVFEDMEIKKAVFDALDQACKADAIFATNTSYLDIDE 409
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ + T + R+IG HFFSPAH+M LLE+V T+ + I + +GK + K+ V G C
Sbjct: 410 IAQSTINPTRVIGLHFFSPAHIMKLLELVTTKTANPTAIATGVALGKRLGKITVPSGVCD 469
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR Y ++ L+ G +D+A+R FG P+G F+
Sbjct: 470 GFIGNRIMSAYRRTCDYLIEDGALPADVDAAMRDFGFPMGIFE 512
>gi|425301222|ref|ZP_18691115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
07798]
gi|408212859|gb|EKI37364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
07798]
Length = 714
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM++ K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|417263965|ref|ZP_12051361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.3916]
gi|418303792|ref|ZP_12915586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNF18]
gi|339415890|gb|AEJ57562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNF18]
gi|386222522|gb|EII44949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.3916]
Length = 714
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTRSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|423115451|ref|ZP_17103142.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5245]
gi|376381537|gb|EHS94274.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5245]
Length = 715
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 281/539 (52%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 9 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQLRDNKELRGAVFISAKADNFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 69 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLTIPVIAAIHGACLGGGLELALACHGR 127
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 VCSDDNKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALEMILTGKQLRPRQALKAGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP-- 239
VV LL+ A++ A + +P RS+ +++ + AR +L RL AKKT
Sbjct: 188 EVVPQTILLQT----AVERALKGRPASRSVPARERILAGPLARSLL--FRLVAKKTHHKT 241
Query: 240 --NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 242 QGNYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK--- 298
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEAN 354
D G + V +V G G A++ + V +K++ + +K
Sbjct: 299 --DRGADAQPVALRSVGILGGGLMGGGIAYVTACKGELPVRIKDIQPRGINHALKYSWDL 356
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C
Sbjct: 357 LDKQVRRRYLRASERDRQMGLITGSLDYQGFAHRDVVIEAVFEDLVLKQKMVSEVEQHCH 416
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
P I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I ++
Sbjct: 417 PETIFASNTSSLPIAEIAAQASRPQRVIGLHFFSPVEKMPLVEVIPHRGTDRQTIATVVK 476
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K+ K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP Q
Sbjct: 477 LAKLQGKTPIVVADKAGFYVNRILAPYINEAMRLLIEGEPIDHIDKSLIEFGFPVGPIQ 535
>gi|16130274|ref|NP_416843.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli str. K-12 substr. MG1655]
gi|170081957|ref|YP_001731277.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli str. K-12 substr. DH10B]
gi|238901514|ref|YP_002927310.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli BW2952]
gi|300948508|ref|ZP_07162604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
116-1]
gi|300956387|ref|ZP_07168679.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
175-1]
gi|301023610|ref|ZP_07187371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
196-1]
gi|331642982|ref|ZP_08344117.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
gi|386594878|ref|YP_006091278.1| fatty acid oxidation complex subunit FadJ [Escherichia coli DH1]
gi|386705600|ref|YP_006169447.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
gi|387622052|ref|YP_006129680.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli DH1]
gi|388478391|ref|YP_490583.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
dehydrogenase, subunit of anaerobic fatty acid oxidation
complex [Escherichia coli str. K-12 substr. W3110]
gi|404375692|ref|ZP_10980875.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
gi|417271642|ref|ZP_12058991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.4168]
gi|417277462|ref|ZP_12064785.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2303]
gi|417291359|ref|ZP_12078640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
gi|417613823|ref|ZP_12264281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_EH250]
gi|417618946|ref|ZP_12269360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
G58-1]
gi|417945214|ref|ZP_12588449.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH140A]
gi|417975345|ref|ZP_12616144.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH001]
gi|418957282|ref|ZP_13509206.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
gi|419160031|ref|ZP_13704536.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6D]
gi|419165155|ref|ZP_13709612.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6E]
gi|419810072|ref|ZP_14334955.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O32:H37 str. P4]
gi|422766957|ref|ZP_16820684.1| fatty oxidation complex [Escherichia coli E1520]
gi|422771812|ref|ZP_16825501.1| fatty oxidation complex [Escherichia coli E482]
gi|422819480|ref|ZP_16867691.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
gi|423704274|ref|ZP_17678699.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
gi|425115761|ref|ZP_18517562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0566]
gi|425120482|ref|ZP_18522181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0569]
gi|425273513|ref|ZP_18664925.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW15901]
gi|425284058|ref|ZP_18675097.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW00353]
gi|432564602|ref|ZP_19801183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
gi|432576626|ref|ZP_19813086.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
gi|432637590|ref|ZP_19873460.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
gi|432686178|ref|ZP_19921475.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE156]
gi|432705142|ref|ZP_19940242.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE171]
gi|432737859|ref|ZP_19972617.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
gi|432955862|ref|ZP_20147740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE197]
gi|433048722|ref|ZP_20236075.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE120]
gi|450246101|ref|ZP_21900842.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S17]
gi|3334437|sp|P77399.1|FADJ_ECOLI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788656|sp|B1X9L4.1|FADJ_ECODH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|259646369|sp|C4ZVN2.1|FADJ_ECOBW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|1788682|gb|AAC75401.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli str. K-12 substr. MG1655]
gi|1799732|dbj|BAA16195.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
dehydrogenase, subunit of anaerobic fatty acid oxidation
complex [Escherichia coli str. K12 substr. W3110]
gi|169889792|gb|ACB03499.1| fused enoyl-CoA hydratase and epimerase and isomerase;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli str.
K-12 substr. DH10B]
gi|238861190|gb|ACR63188.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli BW2952]
gi|260448567|gb|ACX38989.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
DH1]
gi|299880771|gb|EFI88982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
196-1]
gi|300316784|gb|EFJ66568.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
175-1]
gi|300451984|gb|EFK15604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
116-1]
gi|315136976|dbj|BAJ44135.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli DH1]
gi|323936461|gb|EGB32749.1| fatty oxidation complex [Escherichia coli E1520]
gi|323940964|gb|EGB37151.1| fatty oxidation complex [Escherichia coli E482]
gi|331039780|gb|EGI12000.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
gi|342362994|gb|EGU27106.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH140A]
gi|344194910|gb|EGV48981.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH001]
gi|345362017|gb|EGW94174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_EH250]
gi|345375660|gb|EGX07607.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
G58-1]
gi|359332685|dbj|BAL39132.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase, subunit of
anaerobic fatty acid oxidation complex [Escherichia coli
str. K-12 substr. MDS42]
gi|378007375|gb|EHV70344.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6D]
gi|378011237|gb|EHV74182.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6E]
gi|383103768|gb|AFG41277.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
gi|384379929|gb|EIE37796.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
gi|385157156|gb|EIF19149.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O32:H37 str. P4]
gi|385536893|gb|EIF83778.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
gi|385706513|gb|EIG43552.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
gi|386235342|gb|EII67318.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.4168]
gi|386239530|gb|EII76457.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2303]
gi|386253681|gb|EIJ03371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
gi|404290832|gb|EJZ47734.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
gi|408193295|gb|EKI18848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW15901]
gi|408201748|gb|EKI26897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW00353]
gi|408568039|gb|EKK44081.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0566]
gi|408569235|gb|EKK45240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0569]
gi|431093018|gb|ELD98689.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
gi|431114661|gb|ELE18189.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
gi|431170784|gb|ELE70973.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
gi|431221960|gb|ELF19257.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE156]
gi|431242628|gb|ELF37043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE171]
gi|431282319|gb|ELF73204.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
gi|431467248|gb|ELH47259.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE197]
gi|431564493|gb|ELI37667.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE120]
gi|449319805|gb|EMD09851.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S17]
Length = 714
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|300817452|ref|ZP_07097669.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
107-1]
gi|415879583|ref|ZP_11544827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
79-10]
gi|432806489|ref|ZP_20040417.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
gi|432935123|ref|ZP_20134560.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE184]
gi|433194410|ref|ZP_20378399.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
gi|300530078|gb|EFK51140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
107-1]
gi|342926739|gb|EGU95461.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
79-10]
gi|431354631|gb|ELG41357.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
gi|431453291|gb|ELH33701.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE184]
gi|431715435|gb|ELJ79585.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
Length = 714
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P+ +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPS-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|422780740|ref|ZP_16833525.1| fatty oxidation complex [Escherichia coli TW10509]
gi|323977458|gb|EGB72544.1| fatty oxidation complex [Escherichia coli TW10509]
Length = 714
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRTIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEELARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + R L +++ G L A + + +KT
Sbjct: 187 DVVPQSILLE----SAVELAKHDRLSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQKMVAEVEGNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + S +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|423206560|ref|ZP_17193116.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
gi|404622112|gb|EKB18977.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
Length = 716
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 289/543 (53%), Gaps = 21/543 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRSVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQA 234
KLGL+D VV LL A+ +A + KP R + D G L E ++ K+ QA
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKP--RHELKRDLQGKLLETNKLGRKVLFDQA 234
Query: 235 KK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
+K T N P + LDV+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVMSKTRGNYPAPERILDVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSIFFAT 294
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 352
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ +
Sbjct: 353 RYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQMVKD 412
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E+ C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TSA+
Sbjct: 413 VERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSAET 472
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 529 IGP 531
+GP
Sbjct: 533 VGP 535
>gi|417635283|ref|ZP_12285496.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_S1191]
gi|345387566|gb|EGX17388.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_S1191]
Length = 712
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 532
>gi|387612915|ref|YP_006116031.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
H10407]
gi|309702651|emb|CBJ01980.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
H10407]
Length = 714
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|419866590|ref|ZP_14388946.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H25 str. CVM9340]
gi|388334501|gb|EIL01089.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H25 str. CVM9340]
Length = 714
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|194436233|ref|ZP_03068335.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
101-1]
gi|251785701|ref|YP_003000005.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
[multifunctional] and fatty acid oxidation complex
[Escherichia coli BL21(DE3)]
gi|253772736|ref|YP_003035567.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162349|ref|YP_003045457.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli B str. REL606]
gi|254289110|ref|YP_003054858.1| multifunctional enoyl-CoA
hydratase/epimerase/isomerase/3-hydroxyacyl-CoA
dehydrogenase [Escherichia coli BL21(DE3)]
gi|297517922|ref|ZP_06936308.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli OP50]
gi|422786961|ref|ZP_16839700.1| fatty oxidation complex [Escherichia coli H489]
gi|422792597|ref|ZP_16845297.1| fatty oxidation complex [Escherichia coli TA007]
gi|442599062|ref|ZP_21016795.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|194424961|gb|EDX40946.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
101-1]
gi|242377974|emb|CAQ32743.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
[multifunctional] and fatty acid oxidation complex
[Escherichia coli BL21(DE3)]
gi|253323780|gb|ACT28382.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974250|gb|ACT39921.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli B str. REL606]
gi|253978417|gb|ACT44087.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli BL21(DE3)]
gi|323961413|gb|EGB57024.1| fatty oxidation complex [Escherichia coli H489]
gi|323970943|gb|EGB66194.1| fatty oxidation complex [Escherichia coli TA007]
gi|441652160|emb|CCQ02292.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 714
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|393761509|ref|ZP_10350146.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
gi|392607519|gb|EIW90393.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
Length = 711
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 291/536 (54%), Gaps = 18/536 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CHAR
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPVVAAIHGPCLGGGLELALACHAR 127
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ PKT LGLPE+ LG++PG GGTQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQLRAAQAKKLGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 236
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTSESAALRSIFFATTQMKKES 303
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIKDIAEQGINNALKYSFDIL 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
+ +++ + L ++ G DYS F +VD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHNVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ ++TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGP 537
>gi|33601749|ref|NP_889309.1| enoyl-CoA hydratase [Bordetella bronchiseptica RB50]
gi|33576186|emb|CAE33265.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica RB50]
Length = 694
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 271/521 (52%), Gaps = 21/521 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL + PVNAL + GL E+ +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSAPVNALGRTLRHGLAQCLEQVYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+ LG++PG GGTQRLPRLVG +A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARQAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 194 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 253
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 254 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 372
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 373 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 433 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 493 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR + Y + A L+V G +D+A+R +G +GPFQ
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQ 512
>gi|153011339|ref|YP_001372553.1| 3-hydroxyacyl-CoA dehydrogenase [Ochrobactrum anthropi ATCC 49188]
gi|151563227|gb|ABS16724.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ochrobactrum anthropi
ATCC 49188]
Length = 659
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 268/522 (51%), Gaps = 22/522 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+ ++T+ NPPVNA + + GL A++ ++A VL+G G F GG DI F K
Sbjct: 17 DGILVVTIDNPPVNATSAEVRKGLAAAIHHASATAAIRATVLSGAGKIFIGGADIREFGK 76
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P V L V+ +IE KP+VAA+ G ALGGGLE+A+ HARIA+
Sbjct: 77 ----------PPVEPTLPDVITIIESADKPVVAAINGPALGGGLEVALAAHARIASTSAS 126
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
LPE+ LG++PG GGTQRLPRL+G A++M+ + I +E +LGLID + + + +
Sbjct: 127 FALPEVKLGIVPGAGGTQRLPRLIGPLAALDMIATGRQIAPDEAQQLGLIDRISSGDLVA 186
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
L + SL RT L + + A+ + K A +
Sbjct: 187 DAVELAKALVGT-------SLRRTGDLPVTAPDAATFEQAKAKILKKARGATAPIEAARL 239
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
++ G+ +E F L + + L H+FFA+RA KV + KP +
Sbjct: 240 VQLSTTTAIAEGLAEERTTFIRLRDSEEAAALRHLFFAERAAGKVEGME---AKPLALST 296
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
+ + G GLMGSGIA A + V+ E +E KG I ++ V G+L+ + A+
Sbjct: 297 IGIAGTGLMGSGIAVASLAAGYTVIGYETTAEAAAKGHARITDMIQKAVDTGRLSTEAAD 356
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
L D + D D+VIEAV + +K +F EL+ PP ILATNTS ++ +
Sbjct: 357 AQRSKLSVSADMAALADADLVIEAVFDDFTVKASLFRELDALLPPATILATNTSYLNPDE 416
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ T+ DR++G HFFSPA++M LLE+VR TS + + + + IKK+ +V G C
Sbjct: 417 LAAVTNRTDRVLGLHFFSPANIMRLLEVVRCAETSDETLATGIAFARKIKKLSIVTGVCE 476
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR F Y A +++ G ID A+ ++G P+G F
Sbjct: 477 GFIGNRMFSAYRTEAEKMLAEGAYPEDIDRAMEAYGFPMGLF 518
>gi|193062429|ref|ZP_03043524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
gi|194428643|ref|ZP_03061181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
gi|260844928|ref|YP_003222706.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O103:H2 str. 12009]
gi|300922044|ref|ZP_07138187.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
182-1]
gi|301328848|ref|ZP_07221890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
78-1]
gi|415796919|ref|ZP_11497888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E128010]
gi|417176510|ref|ZP_12006306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2608]
gi|417182738|ref|ZP_12009295.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0624]
gi|417251364|ref|ZP_12043129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0967]
gi|417624234|ref|ZP_12274533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_H.1.8]
gi|419290283|ref|ZP_13832375.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11A]
gi|419295614|ref|ZP_13837659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11B]
gi|419301070|ref|ZP_13843069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11C]
gi|419307202|ref|ZP_13849101.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11D]
gi|419312208|ref|ZP_13854070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11E]
gi|419323797|ref|ZP_13865490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12B]
gi|419329765|ref|ZP_13871369.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12C]
gi|419335408|ref|ZP_13876934.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12D]
gi|419340793|ref|ZP_13882257.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12E]
gi|419869598|ref|ZP_14391801.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H2 str. CVM9450]
gi|420392098|ref|ZP_14891349.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
C342-62]
gi|422956299|ref|ZP_16968773.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
gi|450218921|ref|ZP_21896052.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O08]
gi|192932095|gb|EDV84694.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
gi|194413366|gb|EDX29650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
gi|257760075|dbj|BAI31572.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O103:H2 str. 12009]
gi|300421581|gb|EFK04892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
182-1]
gi|300844797|gb|EFK72557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
78-1]
gi|323162246|gb|EFZ48105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E128010]
gi|345377195|gb|EGX09127.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_H.1.8]
gi|371599834|gb|EHN88612.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
gi|378130084|gb|EHW91454.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11A]
gi|378141456|gb|EHX02672.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11B]
gi|378148185|gb|EHX09325.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11D]
gi|378150686|gb|EHX11801.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11C]
gi|378157836|gb|EHX18867.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11E]
gi|378164873|gb|EHX25814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12B]
gi|378170081|gb|EHX30967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12C]
gi|378181287|gb|EHX41959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12D]
gi|378187704|gb|EHX48315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12E]
gi|386179202|gb|EIH56681.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2608]
gi|386184591|gb|EIH67330.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0624]
gi|386218213|gb|EII34696.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0967]
gi|388342192|gb|EIL08244.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H2 str. CVM9450]
gi|391311865|gb|EIQ69488.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
C342-62]
gi|449317370|gb|EMD07460.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O08]
Length = 714
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|386614955|ref|YP_006134621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNK88]
gi|332344124|gb|AEE57458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNK88]
Length = 714
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|419939000|ref|ZP_14455803.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 75]
gi|388408717|gb|EIL69050.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 75]
Length = 714
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|423109515|ref|ZP_17097210.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5243]
gi|376382249|gb|EHS94983.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5243]
Length = 715
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 281/539 (52%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 9 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQLRDNKELRGAVFISAKADNFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 69 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGR 127
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 VCSDDNKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALEMILTGKQLRPRQALKAGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP-- 239
VV LL+ A++ A + +P R++ +++ + AR +L RL AKKT
Sbjct: 188 EVVPQTILLQT----AVERALKGRPASRTVPARERILAGPLARSLL--FRLVAKKTHHKT 241
Query: 240 --NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 242 QGNYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK--- 298
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEAN 354
D G + V +V G G A++ + V +K++ + +K
Sbjct: 299 --DRGADAQPVALRSVGILGGGLMGGGIAYVTACKGELPVRIKDIQPRGINHALKYSWDL 356
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C
Sbjct: 357 LDKQVRRRYLRASERDRQMGLITGSLDYQGFAHRDVVIEAVFEDLTLKQKMVSEVEQHCH 416
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
P I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I ++
Sbjct: 417 PETIFASNTSSLPIAEIAAQASRPHRVIGLHFFSPVEKMPLVEVIPHRGTDRQTIATVVK 476
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K+ K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP Q
Sbjct: 477 LAKLQGKTPIVVADKAGFYVNRILAPYINEAMRLLIEGEPIDHIDKSLVQFGFPVGPIQ 535
>gi|365855359|ref|ZP_09395413.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
gi|363719281|gb|EHM02591.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
Length = 698
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 284/518 (54%), Gaps = 20/518 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + PVNAL+ P+ GL+ + ++A+VL G GRF G DI +++
Sbjct: 17 VAVVQVSYAPVNALSRPVREGLQAAARALAADPSIQAVVLHGGPGRFIAGADI---KEMD 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D ++PDV + IE +P+VAA++G ALGGGLE+A+ C R+A PK +GL
Sbjct: 74 LPLDEPVLPDV-----IAAIEAIPQPVVAAIDGFALGGGLEIALACDLRLATPKASVGLV 128
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E LG+IPG GGTQRLPRLVG +KAIE++ +K + + + +LG++D VV + L + R
Sbjct: 129 ETRLGIIPGSGGTQRLPRLVGTAKAIELIGEAKILKAAQAVELGILDRVVEGDLLAEAIR 188
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
+ AA+R+ + + D+ + + +K + +P A ++ E
Sbjct: 189 VAPQ--AAKRRVSVLPIPSRDETAEEAATQAAVKKGK--------GVPAIAAAAALLRET 238
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G+ +E + F L + L H+F A+R +VP + G+ PR V++VAVI
Sbjct: 239 AGLAFPEGLKRERETFLPLRDSAEAAALRHLFLAEREAGRVPGLE--GVSPREVKRVAVI 296
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
GGG MGSGIA A + V + E ++E + V G+LT+ A L
Sbjct: 297 GGGTMGSGIAIAVADAGLPVQVLERDAEAAEACAARLRDTYGKQVKSGRLTEAAAAERLA 356
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
++ V D+S +VD++IEA E + +K IFS L+K P +LATNTS +D + +
Sbjct: 357 LITPVHDWSLLAEVDLIIEAAFEEMGVKADIFSRLDKVAKPGAVLATNTSYLDPDAIAGF 416
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
TS ++G HFF+PA+VM LLE+VR +T+ V+ + GK + K+P+V G C GF
Sbjct: 417 TSRPQDVLGLHFFAPANVMKLLEVVRCAKTAPDVLATGLAFGKKLGKLPIVSGVCEGFIG 476
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
NR + Y + A LV+ G +D+A+ +FG +G F
Sbjct: 477 NRIYAVYRRHAEYLVADGASPREVDAALEAFGFAMGIF 514
>gi|406596127|ref|YP_006747257.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
gi|406373448|gb|AFS36703.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
Length = 713
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 294/539 (54%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H R+ +P TQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 234
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 235 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGP 541
>gi|410611602|ref|ZP_11322697.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168805|dbj|GAC36586.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 727
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 293/538 (54%), Gaps = 22/538 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T++V DGVAI+T+ P +N L + ++ ++ + +K +V ++G F
Sbjct: 28 TLDVREDGVAILTMDVPGESMNTLKVEFAEQIESVLQQINANSSIKGVVVISGKDNSFVA 87
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A D + + ++ IED VAA+ G ALGGGLELA+ CH R
Sbjct: 88 GADISMLAACETAEDATSIAKGGQDMF-QRIEDMPVTFVAAIHGPALGGGLELALACHYR 146
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KTQLGLPE+ LG++PG GGTQRLP+L+ + +A++MML SI +++ G++D
Sbjct: 147 VCSDDAKTQLGLPEVQLGLLPGSGGTQRLPKLISVQQAMKMMLTGASIRAKQAKNYGIVD 206
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLARLQ-AK 235
+V LL V A+++A + KP R+ + D +G E V K AR Q A
Sbjct: 207 HMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGRFLENTSVGRNLMFKQARKQTAS 261
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + +D IE G+ G G+ EAK F LVM S L +FFA K
Sbjct: 262 KTQGNYPSPELIIDCIETGLSKGFKKGLEVEAKHFGHLVMSPESAALRSLFFATTDMKKE 321
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
V G+KP ++KV V+GGGLMG GIA + +K++ SE + IK
Sbjct: 322 TGVE--GVKPASLKKVGVLGGGLMGGGIAFVTATKAGLPARIKDIRSEGIANAIKYSFDI 379
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ V RG + + + +L G +DY+ F D D+VIEAV E + LKQ + +E+E C
Sbjct: 380 LNKKVKRGFMHKSDMQKQMALLTGSVDYAGFSDADVVIEAVFEDLTLKQNMVAEIEANCA 439
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I A+NTS+I + + K +++IG H+FSP MPL E++ ++TS I +
Sbjct: 440 EHTIFASNTSSIPITQIAAKAKRPEQVIGLHYFSPVDKMPLAEVIAHDKTSDLTISTTVE 499
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K P+VV + GF VNR PY +++A +L+S G + ID ++ FG P+GP
Sbjct: 500 LAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLS-GEPIAHIDRSLVKFGFPVGP 556
>gi|269103138|ref|ZP_06155835.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163036|gb|EEZ41532.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 706
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 290/540 (53%), Gaps = 24/540 (4%)
Query: 7 TMEVGNDGVAI--ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ + +D +A I + N +N L + E+ + D+K +V+ +G F
Sbjct: 7 TLTIDDDKLAWLKIDVPNEKMNTLQDCFATEISQVLEQLEASSDIKGMVIYSGKPDNFVA 66
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + EL L E+ +VAA+ G LGGGLELA+ CH+R
Sbjct: 67 GADIKMLAACETAEQAQQLATTGQELFTRL-ENLPFHVVAAIHGPCLGGGLELALACHSR 125
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A KT++GLPE+ LG++PG GGTQRLPRL+G++ A++M+L K + +++ K+G++D
Sbjct: 126 VATLDDKTRIGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKKMGVVD 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
AVV SE LL V++ +IA KP +S + +G R V+ + + +KT
Sbjct: 186 AVVDSEILLTVAK----EIALEHKPKRQSSWQNWAMGGNPLGRSVVFDQAKKKTEQKTRG 241
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P A L+VI+ G+ G G EA+ F ELVM S+ L H+FFA A K
Sbjct: 242 NYPATTAILEVIKHGLDKGLSQGYALEAQRFGELVMSSQSKALRHIFFATTAMKKEQGSL 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
+ + + + V+GGGLMG+GI+ ++ V +K+V+++ +L +
Sbjct: 302 E---QAHPLTHIGVLGGGLMGAGISHVTATKADLPVRIKDVHNDGVLNALNYNYKLFSKK 358
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
R +++ + N + M G D+ + +DMV+EAV E + LK ++ ++E P I
Sbjct: 359 RDRKIISKAQLQNQMSMFTGGTDFIGYNQLDMVVEAVFEDLALKHQMVRDIETHSKPDTI 418
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE------RTSAQVILDL 472
ATNTS++ ++ + ++++G H+FSP MPL+EI+ + TS Q I
Sbjct: 419 FATNTSSLPIHQIASAAQRPEQVVGLHYFSPVEKMPLVEIIPHQGTELGGATSQQTIETA 478
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+T+ K K P+VV + GF VNR PY +++ARLL+ G + ID ++ FG P+GP
Sbjct: 479 ITLAKKQGKTPIVVADTAGFYVNRILAPYMNEAARLLLE-GEPIEHIDRSLLDFGFPVGP 537
>gi|401678085|ref|ZP_10810055.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
gi|400214693|gb|EJO45609.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
Length = 715
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 282/529 (53%), Gaps = 16/529 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + + V++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSALEAEELARQG-QQVMSEINSLPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTILGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPQS 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R L +++ G L + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRTLLFNMVGKKTEQKTKGNYPAAK 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
LDVIE G+ G SG EAK F EL M S+ L +FFA K P P
Sbjct: 249 RILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPGSE---ASP 305
Query: 306 RGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+R + V+GGGLMG GIA + V +K++N + + ++ N+ V R +
Sbjct: 306 APLRAIGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDQKVKRRHI 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS
Sbjct: 366 KASERDKTLAMISGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++ + + K + +++IG HFFSP MPL+E++ TS Q I ++ + K K P+
Sbjct: 426 SLSIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTPI 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV + GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|393908458|gb|EFO18646.2| fatty acid oxidation complex [Loa loa]
Length = 752
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 282/551 (51%), Gaps = 34/551 (6%)
Query: 6 VTMEVGNDGVAI--ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFS 62
VT++V DG+AI I L N N L + A L+ + + VK IV+ +G F
Sbjct: 65 VTLKV-EDGIAIVKIDLPNAKENVLNETVAADLRYCMDRIDADASVKGIVIISGKPNTFI 123
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI + K + D + + + IE+ +KP+VAA+ G +GGGLELA+ CH
Sbjct: 124 AGADIKMLSKCKSSADARKISSDGQQDFLR-IENSQKPVVAAIMGTCMGGGLELALACHY 182
Query: 123 RIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
RIA PKT LPE+ LG++PG GGTQRLP+LV +++A+ M+L K++ + + K+GLI
Sbjct: 183 RIAMNVPKTLFALPEVKLGLLPGAGGTQRLPKLVSITEALGMLLTGKTLPAVKAKKIGLI 242
Query: 181 DAVVTS-------EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-------- 225
D +V E + L + I A R+ + L D+ GS +
Sbjct: 243 DRIVQPIGAGVKPAEENNYNYLEQIAIEAARQLSMGMLE-IDRKGSFWKKATDYALTKTP 301
Query: 226 -----VLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
+LK A+ K T N P L V+E GI G G L+E++ F +L
Sbjct: 302 LFKHFILKKAQENVMKMTFGNYPAPLKILSVVESGITKGSDLGYLEESEAFGDLTQTTQC 361
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ VF + + G + + + K+AVIG GLMG+GIA I +I L +
Sbjct: 362 KALIGVFNGRTECRR----NKFG-ESKKIDKLAVIGAGLMGAGIANVSIDKDIETYLLDR 416
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
N E L +G I + G+V R K+T + + + LK Y + D D+ IEAV E +
Sbjct: 417 NDEGLARGQNQIHKHYDGMVKRRKITSYQKHKFMANLKTTCIYDDLHDCDVAIEAVFEEL 476
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
PLK +I +LE P HCI+A+NTS + + + ++ +RIIG H+FSP M LLEI+
Sbjct: 477 PLKHEIIKKLESVVPEHCIIASNTSALPITQIASVSTRPERIIGMHYFSPVEKMELLEII 536
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
T+ TS + I +G I K+ VVV +C GF V R P L+ GV ID
Sbjct: 537 ITKNTSKEAIAAAAQLGLIQNKLVVVVKDCPGFFVVRCLAPMMSEVVRLLQEGVHPDEID 596
Query: 520 SAIRSFGLPIG 530
R++G P+G
Sbjct: 597 EVTRNYGFPVG 607
>gi|312087319|ref|XP_003145425.1| hadha protein [Loa loa]
Length = 755
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 282/551 (51%), Gaps = 34/551 (6%)
Query: 6 VTMEVGNDGVAI--ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFS 62
VT++V DG+AI I L N N L + A L+ + + VK IV+ +G F
Sbjct: 68 VTLKV-EDGIAIVKIDLPNAKENVLNETVAADLRYCMDRIDADASVKGIVIISGKPNTFI 126
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI + K + D + + + IE+ +KP+VAA+ G +GGGLELA+ CH
Sbjct: 127 AGADIKMLSKCKSSADARKISSDGQQDFLR-IENSQKPVVAAIMGTCMGGGLELALACHY 185
Query: 123 RIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
RIA PKT LPE+ LG++PG GGTQRLP+LV +++A+ M+L K++ + + K+GLI
Sbjct: 186 RIAMNVPKTLFALPEVKLGLLPGAGGTQRLPKLVSITEALGMLLTGKTLPAVKAKKIGLI 245
Query: 181 DAVVTS-------EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-------- 225
D +V E + L + I A R+ + L D+ GS +
Sbjct: 246 DRIVQPIGAGVKPAEENNYNYLEQIAIEAARQLSMGMLE-IDRKGSFWKKATDYALTKTP 304
Query: 226 -----VLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
+LK A+ K T N P L V+E GI G G L+E++ F +L
Sbjct: 305 LFKHFILKKAQENVMKMTFGNYPAPLKILSVVESGITKGSDLGYLEESEAFGDLTQTTQC 364
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ VF + + G + + + K+AVIG GLMG+GIA I +I L +
Sbjct: 365 KALIGVFNGRTECRR----NKFG-ESKKIDKLAVIGAGLMGAGIANVSIDKDIETYLLDR 419
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
N E L +G I + G+V R K+T + + + LK Y + D D+ IEAV E +
Sbjct: 420 NDEGLARGQNQIHKHYDGMVKRRKITSYQKHKFMANLKTTCIYDDLHDCDVAIEAVFEEL 479
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
PLK +I +LE P HCI+A+NTS + + + ++ +RIIG H+FSP M LLEI+
Sbjct: 480 PLKHEIIKKLESVVPEHCIIASNTSALPITQIASVSTRPERIIGMHYFSPVEKMELLEII 539
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
T+ TS + I +G I K+ VVV +C GF V R P L+ GV ID
Sbjct: 540 ITKNTSKEAIAAAAQLGLIQNKLVVVVKDCPGFFVVRCLAPMMSEVVRLLQEGVHPDEID 599
Query: 520 SAIRSFGLPIG 530
R++G P+G
Sbjct: 600 EVTRNYGFPVG 610
>gi|415778407|ref|ZP_11489453.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
gi|315615610|gb|EFU96242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
Length = 714
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPLSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|432661576|ref|ZP_19897220.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE111]
gi|431199313|gb|ELE98066.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE111]
Length = 714
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|312973398|ref|ZP_07787570.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1827-70]
gi|310331993|gb|EFP99228.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1827-70]
Length = 714
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|345300205|ref|YP_004829563.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
gi|345094142|gb|AEN65778.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
Length = 715
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 284/533 (53%), Gaps = 12/533 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ + D VA++T+ P +N L ++ ++ +++ +V ++ F
Sbjct: 8 TLNIRPDNVAVVTIDVPGEKMNTLKAEFGVQVRAMLKQIRENKELRGLVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARANNALEAEELARQGQQVMAE-IHALPVPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKTGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
VV LL+ + AL + KP + R G L A + + A+KT N
Sbjct: 187 EVVPYSILLEAAVERALK-GRQAKPHLPVRERI-LAGPLGRALLFSMVGKKTAQKTKGNY 244
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
P L+VIE G+ HG SG EAK F EL M S+ L +FFA K P
Sbjct: 245 PATTRILEVIETGLAHGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPGSD-- 302
Query: 302 GLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+P +R V V+GGGLMG GIA + V +K++N + + ++ + V
Sbjct: 303 -AEPASLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQQLDQKVK 361
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
R + + + L ++ G DYS F D+VIEAV E + LKQK+ +++E+ C PH I A
Sbjct: 362 RRHIKASERDKVLALISGTTDYSGFAHRDLVIEAVFEDLALKQKMVADVEQYCAPHTIFA 421
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I ++ + K+
Sbjct: 422 SNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTIATVVKLAKMQG 481
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVV + GF VNR PY A L++ G + +D ++ FG P+GP Q
Sbjct: 482 KTPVVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDESLVKFGFPVGPIQ 534
>gi|410860966|ref|YP_006976200.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
gi|410818228|gb|AFV84845.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
Length = 719
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 195/536 (36%), Positives = 292/536 (54%), Gaps = 18/536 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSG 63
T+ ++GVAI+++ P +N L + ++ +K +VLT G F
Sbjct: 19 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISTMLDDIERDSSIKGVVLTSGKPTSFVA 78
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A D + + + + + IE+ K VAA+ G ALGGGLELA+ CH R
Sbjct: 79 GADISMLAECKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALACHYR 137
Query: 124 IA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ +P TQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G++D
Sbjct: 138 VCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGVQQAMKMMLTGSPARAKQAKKYGIVD 197
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA-KK 236
VV LLKV+ +AL +RKP + ++ DK L R ++ K AR K
Sbjct: 198 DVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLEKTGPGRNMMFKKAREATFAK 253
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P +DVIE GI +G+ EA+ F +LVM S L +FFA K
Sbjct: 254 TKGNYPAPGHIIDVIETGINEDMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMKKEN 313
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K +
Sbjct: 314 GVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSYDIL 371
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
V + + + L +L G LDYS ++DVD+V+EAV E + LKQK+ +++E+ C
Sbjct: 372 NKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDVDIVVEAVFEDLDLKQKMVADIEENCKE 431
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I A+NTS+I + + + + + +IG H+FSP MPL E++ E+TS QVI +
Sbjct: 432 STIFASNTSSIPITQIAAEAARPENVIGLHYFSPVDKMPLAEVIAHEKTSDQVISSTVEF 491
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 492 AKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGP 547
>gi|419317643|ref|ZP_13859445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12A]
gi|378168336|gb|EHX29240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12A]
Length = 709
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 3 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 63 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 121
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 122 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 181
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 182 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 237
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 238 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 296
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 297 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 355
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 356 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 415
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 416 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 475
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 476 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 529
>gi|328717308|ref|XP_001949325.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Acyrthosiphon pisum]
Length = 760
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 292/544 (53%), Gaps = 31/544 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINV 69
D + +ITL P VN+L+ ++ L+ +A+ +K +++++G F G DI++
Sbjct: 42 DDILVITLNTPNSKVNSLSHDVMDELQTNLNKASQDPSIKGSVIISGKPNCFIAGADISM 101
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
Q A +V + + ++N +E KP+VAA+ G LGGGLE+AM CH RIA +
Sbjct: 102 LQACRTAEEVHKISH-DGQNILNQVEKSTKPVVAAIMGSCLGGGLEVAMACHYRIAVKSK 160
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 185
T LGLPE+ LG++PG GGTQRLP+LV + ++M L KS +++ K+GLID +VT
Sbjct: 161 NTALGLPEVMLGLLPGGGGTQRLPKLVAMPTVLDMALTGKSYRADKALKVGLIDQLVTPL 220
Query: 186 -------SEELLKVSRLWALD----IAARRKPWIRSLHRT--DKLGSLSEAREVLKLARL 232
+E L+ A+D +AA K R+ ++T DK+ L+ +E L+
Sbjct: 221 GPGLSTPTERTLEYLEEIAIDAAKKLAAGHKLTKRNKNKTLIDKVIDLALQQEWLREKFF 280
Query: 233 QAKK------TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
+ K T P +DVI+ GI HG G E+ F EL M S+GL+ +F
Sbjct: 281 DSAKGKVLKMTGGLYPAPLKIIDVIKTGIAHGTTKGYAAESNGFAELAMTPQSKGLIGLF 340
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346
Q K G ++ V V+G GLMG+GIA + + V+LK+ N E L K
Sbjct: 341 QGQTECKK----NKFGEPKVALKTVGVLGAGLMGAGIAHVTVDKGLQVILKDTNKEGLAK 396
Query: 347 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 406
GI IE + G V R KLT + + + L L Y F D+VIEAV E++ +K ++
Sbjct: 397 GIAQIEKGLTGAVKRKKLTAIEKDRYVSDLTSTLSYESFSKADIVIEAVFENIKIKHQVI 456
Query: 407 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466
ELE+ P HCI+ATNTS I + + E +S + +IG H+FSP M LLEI+ T++TS
Sbjct: 457 KELEQVVPKHCIIATNTSAIPIGKISEGSSRPENVIGMHYFSPVDKMQLLEIITTDKTSK 516
Query: 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
+ +++G K+ +VV + GF R A L+ GV+ ++D+ +SFG
Sbjct: 517 ETAAAAVSLGLKQGKIVIVVKDGPGFYTTRILSTMLSEAMRLLQEGVNPKQLDTITKSFG 576
Query: 527 LPIG 530
P+G
Sbjct: 577 FPVG 580
>gi|432490018|ref|ZP_19731891.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE213]
gi|432543952|ref|ZP_19780795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE236]
gi|432549442|ref|ZP_19786210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE237]
gi|432622592|ref|ZP_19858623.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
gi|432719461|ref|ZP_19954430.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
gi|432840044|ref|ZP_20073511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE140]
gi|433203958|ref|ZP_20387732.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
gi|431020293|gb|ELD33649.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE213]
gi|431074362|gb|ELD81926.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE236]
gi|431079720|gb|ELD86674.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE237]
gi|431159392|gb|ELE59949.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
gi|431263273|gb|ELF55262.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
gi|431388782|gb|ELG72504.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE140]
gi|431720963|gb|ELJ84965.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|301647554|ref|ZP_07247352.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
146-1]
gi|301074302|gb|EFK89108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
146-1]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDITAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|307311099|ref|ZP_07590743.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
W]
gi|378712225|ref|YP_005277118.1| fatty acid oxidation complex subunit FadJ [Escherichia coli KO11FL]
gi|386609716|ref|YP_006125202.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli W]
gi|386700686|ref|YP_006164523.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KO11FL]
gi|386710202|ref|YP_006173923.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W]
gi|306908605|gb|EFN39102.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
W]
gi|315061633|gb|ADT75960.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli W]
gi|323377786|gb|ADX50054.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
KO11FL]
gi|383392213|gb|AFH17171.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KO11FL]
gi|383405894|gb|AFH12137.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E + LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEDLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432948212|ref|ZP_20143368.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE196]
gi|433043916|ref|ZP_20231411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE117]
gi|431458190|gb|ELH38527.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE196]
gi|431555754|gb|ELI29593.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE117]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQKLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT L LPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPSTDRILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPTPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|218554896|ref|YP_002387809.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli IAI1]
gi|417131926|ref|ZP_11976711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0588]
gi|417146068|ref|ZP_11987026.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2264]
gi|419807426|ref|ZP_14332482.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli AI27]
gi|419922993|ref|ZP_14440966.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-15]
gi|432765725|ref|ZP_20000163.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
gi|433092718|ref|ZP_20278985.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE138]
gi|254788657|sp|B7M6M2.1|FADJ_ECO8A RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218361664|emb|CAQ99260.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI1]
gi|384469567|gb|EIE53722.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli AI27]
gi|386149780|gb|EIH01069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0588]
gi|386163520|gb|EIH25315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2264]
gi|388394756|gb|EIL56012.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-15]
gi|431309900|gb|ELF98093.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
gi|431610048|gb|ELI79353.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE138]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|407683075|ref|YP_006798249.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
gi|407244686|gb|AFT73872.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
Length = 713
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 294/539 (54%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H R+ +P TQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 234
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 235 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + + + L +L G LDYS +++ D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQNADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C I A+NTS+I + + K + + +IG H+FSP MPL E++ +RTS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDRTSDQVISST 482
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGP 541
>gi|82777753|ref|YP_404102.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella dysenteriae Sd197]
gi|123742102|sp|Q32DJ4.1|FADJ_SHIDS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|81241901|gb|ABB62611.1| putative enzyme [Shigella dysenteriae Sd197]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT L LPE+ LG++PG GTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|343514105|ref|ZP_08751187.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
gi|342800771|gb|EGU36282.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
Length = 704
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 294/538 (54%), Gaps = 14/538 (2%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE-ATSRDDVKAIVL-TGNG 58
+ A +T++ N I + N +N L ++ F E + +K +++ +G
Sbjct: 4 LKAFNLTIDEQNIAWLCIDVPNEKMNTLQAAFADEMESVFAELEQHKSALKGLIIHSGKP 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G D+ + A + + E+ L P+VAA+ G LGGGLELA+
Sbjct: 64 DNFVAGADVRMLDACQSAQEAQALATKGQEMFEKL-SKLSFPVVAAIHGPCLGGGLELAL 122
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
C R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ K
Sbjct: 123 ACDYRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKK 182
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 234
LG++DA V LL+V++ + + + K + + + R+V+ + A+
Sbjct: 183 LGVVDACVAPTILLEVAKQF---VEGKDKAKHKVSTKEKLMAQTGFGRKVIFEQAAKKTQ 239
Query: 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294
+KT N P +A L+VI G+ HG G+ EA+ F ELVM + S+ L +FFA T++
Sbjct: 240 QKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNESKALRSIFFA---TTE 296
Query: 295 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 353
+ +P V+++AV+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 297 MKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKDVSNDGVLNALNYNFK 356
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
R L++ + + ++ L G +D+ F D+VIEAV E + LKQ++ +++E+
Sbjct: 357 LFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFEDLALKQQMVADIEQNA 416
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
P I ATNTS++ ++ + E+ + + +IG H+FSP MPL+E++ + TSAQ I ++
Sbjct: 417 KPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEVIPHQTTSAQTISTVV 476
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K P+VV +C GF VNR PY A ++ G + ++D A+ G P+GP
Sbjct: 477 ELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQLDGALLDAGFPVGP 534
>gi|419386966|ref|ZP_13927844.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14D]
gi|378231493|gb|EHX91604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14D]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432869707|ref|ZP_20090300.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE147]
gi|431410293|gb|ELG93455.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE147]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|300903733|ref|ZP_07121648.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
84-1]
gi|301304884|ref|ZP_07210988.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
124-1]
gi|415864075|ref|ZP_11537226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
85-1]
gi|300404315|gb|EFJ87853.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
84-1]
gi|300839813|gb|EFK67573.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
124-1]
gi|315255280|gb|EFU35248.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
85-1]
Length = 714
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSVQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|417286296|ref|ZP_12073585.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07793]
gi|386249755|gb|EII95924.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07793]
Length = 714
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM++ K + +++ KLG++D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKLGVVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|419278869|ref|ZP_13821115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10E]
gi|419376283|ref|ZP_13917307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14B]
gi|419381621|ref|ZP_13922571.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14C]
gi|378127570|gb|EHW88958.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10E]
gi|378219006|gb|EHX79275.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14B]
gi|378227264|gb|EHX87436.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14C]
Length = 714
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|375108846|ref|ZP_09755100.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
gi|374571032|gb|EHR42161.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
Length = 712
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 290/536 (54%), Gaps = 18/536 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLNIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CH R
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPLVAAIHGPCLGGGLELALACHVR 127
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ PKT LGLPE+ LG++PG GGTQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQLRAAQAKKLGLVD 187
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 236
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPESAALRSIFFATTQMKKES 303
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIKDIAEQGINNALKYRFDIL 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
+ +++ + L ++ G DYS F DVD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ ++TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGP 537
>gi|419175972|ref|ZP_13719788.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7B]
gi|378031944|gb|EHV94526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7B]
Length = 714
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|425289358|ref|ZP_18680205.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
gi|408213594|gb|EKI38078.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
Length = 714
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DALPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|337265631|ref|YP_004609686.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336025941|gb|AEH85592.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
Length = 690
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 279/526 (53%), Gaps = 18/526 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSGGFDINV 69
++ VA++T+ NPPVNAL+ + L RDD V AI++ G F G DI
Sbjct: 10 DNDVAVVTIDNPPVNALSFHVREPLMQAL--VALRDDASVAAIIIACAGRTFVAGADITE 67
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
F K M + +V ++E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 68 FGKP--------MQPPELRAIVAMLETIAKPTVAAIHGTALGGGLELALGCHFRVADAHA 119
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+LGLPE+ LG++PG GGT RLPRLVG KA++M++ I +EE GL+DAV + L
Sbjct: 120 KLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGTPIGAEEAHAAGLVDAVFEGD-L 178
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+ +A ++A + P+ R D+L A + A L K P AC
Sbjct: 179 STHAVNFARELAPKGGPFTPVRDRDDRLKETDLAAFDAEAADLARKARGLEAPI--ACAQ 236
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 309
+ + + E +F L+ D SR H+FFA+R +KVP R +
Sbjct: 237 AVRNAVTLPFDEALAAERALFAGLIASDQSRAQRHLFFAEREAAKVPGKD---TPKRRIA 293
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
+V VIG G MG GIA A V L E + E L +G+ TIE N V+RG LT+D
Sbjct: 294 RVGVIGAGTMGGGIAMAFANGGFSVTLLETSEEALQRGLATIEKNYAVSVSRGSLTEDAK 353
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L KG DY++ D D+++EAV E + +K+++F +++ P ILATNTS +D++
Sbjct: 354 RQRLAQFKGSTDYADLADCDLIVEAVFEDMAVKKEVFGKIDAVARPGAILATNTSYLDID 413
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489
+ S ++G HFFSPA+VM LLEIVR ++T+ + ++ + + I KV VVVG C
Sbjct: 414 EIAASVSRPQDVVGLHFFSPANVMKLLEIVRADKTAPDALATVVDLARRIGKVAVVVGVC 473
Query: 490 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
GF NR + L+ G +ID A FG P+GPFQ G
Sbjct: 474 HGFVGNRMLAARGSESEELLLEGATPSQIDKAFTDFGWPMGPFQMG 519
>gi|319780809|ref|YP_004140285.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166697|gb|ADV10235.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 688
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 281/529 (53%), Gaps = 15/529 (2%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++V DG VA++T+ NPPVNAL+ + L E V AIV+ G F G D
Sbjct: 5 VKVSRDGDVAVVTIDNPPVNALSFHVREPLMQALVELRDDASVAAIVIACAGRTFVAGAD 64
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K M + +V +E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 65 ITEFGKP--------MQQPELRAIVATLETIAKPTVAAIHGTALGGGLELALGCHFRVAD 116
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
+LGLPE+ LG++PG GGT RLPRLVG KA++M++ I + E GL+DAV
Sbjct: 117 AGAKLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGAPIGATEAHAAGLVDAVFEG 176
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 246
+ L + +A +IA + P+ R + L A ++ A L K P A
Sbjct: 177 D-LTTHAVNFAGEIARKGGPFTPVRDRNEGLKQADLAAFDVEAADLARKARGLEAPI--A 233
Query: 247 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
C + + + + E +F +LV D SR H+FFA+R +K+P DI R
Sbjct: 234 CAQSVRNAVTLPFDAALAAERALFVKLVASDQSRAQRHLFFAEREAAKLPG-KDI--VKR 290
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+ +V VIG G MG GIA A V+L E + E L +G+ TI+ N VTRG L++
Sbjct: 291 RIARVGVIGAGTMGGGIAMAFANGGYSVILLETSHEALQRGLATIDRNYSVSVTRGSLSE 350
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
D L KG DY + D D+++EAV E + +K+++F +LE P ILATNTS +
Sbjct: 351 DAKRQRLAQFKGSTDYVDLADCDLIVEAVFEDMAVKKEVFGKLEAVAKPGAILATNTSYL 410
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D+N + TS ++G HFFSPA+VM LLEIVR E+T+ + + + + I KV VVV
Sbjct: 411 DINEIAGSTSRPQDVLGLHFFSPANVMKLLEIVRAEKTAPDALATSVDLARRIGKVAVVV 470
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
G C GF NR + L+ G +ID FG P+GPFQ G
Sbjct: 471 GVCHGFVGNRMLAARGSESEALLLEGATPSQIDQVFTDFGWPMGPFQMG 519
>gi|407699429|ref|YP_006824216.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
gi|407248576|gb|AFT77761.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
Length = 713
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 293/539 (54%), Gaps = 24/539 (4%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ + +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVLGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H R+ +P TQLGLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQLGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGAPARAKQAKKYG 188
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 234
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRSMMFKKAREAT 244
Query: 235 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNDGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
K V G+KP + KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMNKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGP 541
>gi|170767402|ref|ZP_02901855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
TW07627]
gi|170123736|gb|EDS92667.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
TW07627]
Length = 714
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 285/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA+I++ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVISIDVPGEKMNTLKAEFASQVRAIIKQLRENKNLRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AAV G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAVHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ + PKT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + +++ K
Sbjct: 123 CHGRVCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRAKQALKS 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + + R+L +++ G L A + + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQNRQASRTLPIRERVMAGPLGRALLFKMVGKKTEQ 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGVSSGYDAEARAFGELAMTPQSQALRNLFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D+ P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDVEPGPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINAQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
V R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E+ C
Sbjct: 357 DSKVRRRHLKASERDKQLALISGTTDYRGFSHRDLIIEAVFENLELKQKMVAEVEQNCAS 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ ++ + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPISDIAAYATRPEQVIGLHFFSPVEKMPLVEIIPHVGTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|444350282|ref|YP_007386426.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
(EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
5.1.2.3) [Enterobacter aerogenes EA1509E]
gi|443901112|emb|CCG28886.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
(EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
5.1.2.3) [Enterobacter aerogenes EA1509E]
Length = 714
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 290/537 (54%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+E+ D +A+IT+ P +N L ++ + ++ A+ ++ F
Sbjct: 8 TLEIRPDNIAVITIDAPGEKINTLKAEFGGEVRTIIRQLRENKALRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCTSAAEAEALARQG-QQIMSEIHALSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
VV LL+ A+++A + +P R++ +++ + R++L +A+ +KT
Sbjct: 187 DVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGPLGRQLLFRMVAKKTQQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 300 DIGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVR 356
D G + P + +AV+GGGLMG GIA + V +K++ ++ + +K +
Sbjct: 298 DRGAEADPAALNSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQAKGINHALKYSWDLLD 357
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + + L ++ G DY F D+VIEAV E + LKQ++ E+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVFEDLALKQRMVGEIEQCCGPQ 417
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + + + +++IG HFFSP MPL+E++ T Q I ++ +
Sbjct: 418 TIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLVEVIPHATTDEQTIATVVKLA 477
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 478 KLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|417238042|ref|ZP_12035773.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
9.0111]
gi|386213820|gb|EII24245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
9.0111]
Length = 714
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRSSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|410616276|ref|ZP_11327268.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410163985|dbj|GAC31406.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 716
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 295/545 (54%), Gaps = 22/545 (4%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNG 58
A T+ DG+AI+++ P +N L + + D ++ S +D+K +V+ +G
Sbjct: 11 AQSAFTLTKREDGIAILSMDVPGETMNTLKVEFGDQVNDMLDQIQSDNDIKGVVIISGKD 70
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DI++ A D + + V IED P VAA+ G ALGGGLELA+
Sbjct: 71 NSFVAGADISMLASCQSAVDAEAIGKGG-QAVFQRIEDMSIPFVAAIHGPALGGGLELAL 129
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
CHAR+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML S+ +++ K
Sbjct: 130 ACHARVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGVSVRAKQAKK 189
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLAR 231
G++D +V LL V A+++A + KP R + D +G+ E + + K AR
Sbjct: 190 YGIVDDMVPRSILLDV----AIEMAKKPKPT-RKPVKLDVMGTFLERTPMGRKLMFKQAR 244
Query: 232 LQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290
Q + KT N P + +D IE G+ G G+ EAK F LVM S L +FFA
Sbjct: 245 KQTQAKTLGNYPSPERIIDCIETGLEKGIQQGMALEAKHFGHLVMTPESAALRSLFFATT 304
Query: 291 ATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIK 349
K + G+ P+ ++K+ V+GGGLMG GIA N+ +K++ S+ + ++
Sbjct: 305 EMKKEHGIE--GVAPKKLKKIGVLGGGLMGGGIAFVTATKANLPARIKDIRSDGIAHAMQ 362
Query: 350 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 409
+ V R + L L G +DY F + D+VIEAV E + LKQ + +++
Sbjct: 363 YSYDILNKKVKRRFMLHSDMQKQLSRLTGAIDYVGFDNTDVVIEAVFEDLGLKQNMVADV 422
Query: 410 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 469
E+ C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS + I
Sbjct: 423 EEHCAQHTIFASNTSSIPIAQIAANAQRPENVIGLHYFSPVDKMPLAEVIAHEGTSDETI 482
Query: 470 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLP 528
+ + K K P+VV + GF VNR PY ++SA +L+S G + +ID A+ FG P
Sbjct: 483 STTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLS-GEPIDQIDKALVKFGFP 541
Query: 529 IGPFQ 533
+GP +
Sbjct: 542 VGPIK 546
>gi|423104122|ref|ZP_17091824.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5242]
gi|376385764|gb|EHS98485.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5242]
Length = 714
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 20/536 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F G
Sbjct: 9 LEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R+
Sbjct: 69 ADINMIARCHSAEEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRV 127
Query: 125 AAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 CSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPN 240
VV LL+ A+++A + +P R++ +++ G L + +A+ KT N
Sbjct: 188 VVPQTILLQT----AIELALKGRPASRTVPARERILAGPLGRSLLFRLVAKKTHHKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVRG 357
G V +V G G A++ + V +K++ + +K +
Sbjct: 299 RGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLDK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V R L + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 359 QVRRRYLRASERERQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQYCSPET 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + + K
Sbjct: 419 IFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 479 LQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|170682519|ref|YP_001744544.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SMS-3-5]
gi|254788653|sp|B1LME7.1|FADJ_ECOSM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|170520237|gb|ACB18415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
SMS-3-5]
Length = 714
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 281/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKK- 297
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ +D P + G G TA + V +K++N + + +K +
Sbjct: 298 DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>gi|330829737|ref|YP_004392689.1| Fatty oxidation complex subunit alpha [Aeromonas veronii B565]
gi|406677017|ref|ZP_11084202.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
gi|423209569|ref|ZP_17196123.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|328804873|gb|AEB50072.1| Fatty oxidation complex, alpha subunit [Aeromonas veronii B565]
gi|404617427|gb|EKB14363.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|404625331|gb|EKB22148.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
Length = 716
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 290/546 (53%), Gaps = 27/546 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRTVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ K+ LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKSVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGSLSEAREVL- 227
KLGL+D VV LL A+ +A + KP R L T+KLG R+VL
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLETNKLG-----RKVLF 231
Query: 228 -KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
+ ++ KT N P + LDV+ G+ G +G++ E++ F ELVM S L +F
Sbjct: 232 DQASKGVKAKTRGNYPAPERILDVVRIGVEEGMKAGLVAESRHFGELVMTAESAALRSIF 291
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLL 345
FA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 292 FATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIG 349
Query: 346 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 405
++ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++
Sbjct: 350 NAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQM 409
Query: 406 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465
++E C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TS
Sbjct: 410 VKDVEHECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTS 469
Query: 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 525
A+ + + + K P+VV + GF VNR PY A LV G V +DSA+ F
Sbjct: 470 AETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDF 529
Query: 526 GLPIGP 531
G P+GP
Sbjct: 530 GFPVGP 535
>gi|426217776|ref|XP_004003128.1| PREDICTED: peroxisomal bifunctional enzyme [Ovis aries]
Length = 723
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/529 (35%), Positives = 286/529 (54%), Gaps = 23/529 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++I + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNSLALIRLRNPPVNAISIKVAHGIKESLQKAITDDTVKAIVICGADGIFCAGADIGEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH + D+ L +V+ I+ KKP+VAA++ +ALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKSFDIQLGD------IVDEIQRNKKPVVAAIQKVALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
G PE+TLG++PG GTQ LPRLVG+ A+++++ + I++ E KLG+ID +V S EE
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 189 LLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+K + R+ L +RR I ++ + SL + A LQ +K P +AC
Sbjct: 181 SIKFAQRISDLSPESRR---ICNM----PVPSLPNMDAIFSEAFLQVRKRYPGWLSPEAC 233
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-- 305
+ ++ + + G KE ++ L ++ L + FFA+R +K + K
Sbjct: 234 VRAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYAFFAERMANKWSTPSGASWKTSS 293
Query: 306 -RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 294 GRPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KM 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q + + E VD+VIEAV E + LK+ +F+EL C P L TNTS
Sbjct: 352 QQSGHPWSGPKPRLTTSMKELSGVDLVIEAVYEEMNLKKHVFAELSAICKPEAFLCTNTS 411
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D++ + ++ +IG HFFSPAHVM LLE++ + +S + +M + K IKK+ V
Sbjct: 412 ALDIDEIASSSNRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTVATVMNLSKKIKKIGV 471
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR Y L+ G ID + FG +GPF+
Sbjct: 472 VVGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFR 520
>gi|261340726|ref|ZP_05968584.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
gi|288317143|gb|EFC56081.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
Length = 715
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 275/529 (51%), Gaps = 16/529 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKHVRENKALRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEALARQGQQVMAE-IHALPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPQA 192
Query: 188 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVL-KLA-RLQAKKTAPNMPQH 244
LL + AL ++P +R LG R VL KLA + +KT N P
Sbjct: 193 ILLDAAVERALKGRQAKRPLPVRERILAGPLG-----RAVLFKLAGKKTEQKTRGNYPAA 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+ L+VIE G+ G SG EAK F EL M S+ L ++FFA K P +D
Sbjct: 248 KRILEVIETGLSQGASSGYAAEAKAFGELAMTPQSQALRNIFFASTEVKKDPG-SDAAPA 306
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
P V G G TA + V +K++N++ + ++ N+ V R +
Sbjct: 307 PLQAVGVLGGGLMGGGIAFVTAS-KGKLPVRIKDINAKGINHALQYSWQNLDRKVKRRHI 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + L M+ G DYS F+ D+VIEAV E + LKQ++ +++E C PH I A+NTS
Sbjct: 366 KASERDKTLAMITGTTDYSGFRHRDLVIEAVFEDLALKQQMVADVEAHCAPHTIFASNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+I + + + +++IG HFFSP MPL+E++ T Q + ++ + K K P+
Sbjct: 426 SIPIGEIAANAARPEQVIGLHFFSPVEKMPLVEVIPHANTCPQTVATVVKLAKKQGKTPI 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV + GF VNR PY A L++ G + +D A+ +FG P+GP Q
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVNFGFPVGPIQ 534
>gi|300822219|ref|ZP_07102361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
119-7]
gi|331669040|ref|ZP_08369888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA271]
gi|331678287|ref|ZP_08378962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
gi|417223371|ref|ZP_12026811.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.154]
gi|417269675|ref|ZP_12057035.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.3884]
gi|423706373|ref|ZP_17680756.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
gi|432377503|ref|ZP_19620493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
gi|432835317|ref|ZP_20068856.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE136]
gi|300525349|gb|EFK46418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
119-7]
gi|331064234|gb|EGI36145.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA271]
gi|331074747|gb|EGI46067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
gi|385712257|gb|EIG49212.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
gi|386203173|gb|EII02164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.154]
gi|386228480|gb|EII55836.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.3884]
gi|430897909|gb|ELC20097.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
gi|431385677|gb|ELG69664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE136]
Length = 714
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432936067|ref|XP_004082104.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Oryzias latipes]
Length = 763
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 284/554 (51%), Gaps = 30/554 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V E+ +D VA++ + +P VN L+ + L + EE + D VK A++++
Sbjct: 36 LARTHVNYEIKDD-VAVVRINDPNSKVNTLSTQMQKDLTEVMEEVWANDAVKSAVLISSK 94
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q A +VS + ++ IE KP+VAA+ G LGGGLE A
Sbjct: 95 PGCFIAGADINMIQSCKSAEEVSRLSQEGQKMF-EKIEKSPKPVVAAINGSCLGGGLEFA 153
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ C RIA + KT LG PE+ LG++PG GGTQRLP++VGL A +MML ++I +++
Sbjct: 154 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPNAFDMMLTGRNIRADKAK 213
Query: 176 KLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222
K+GL+ ++ T E L +V+ A I ++ + K+
Sbjct: 214 KMGLVHQLIDPLGPGLKSPEERTIEYLEEVAVECAKGIVNKKIALHKEKSMMQKIQDYVM 273
Query: 223 AREVLK---LARLQAKKTAPNMPQHQACLDVIE---EGIVHGGYSGVLKEAKVFKELVML 276
+ E ++ +Q+K + + A L +IE G+ G +G L E++ F +L
Sbjct: 274 SFEFVRNQIYKTVQSKVMKQSKGLYPAPLKIIECVKVGVEQGPVAGYLAESQNFGQLART 333
Query: 277 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 336
S L+ ++ Q A K G R V+ +A++G GLMG+GIA + ++ +L
Sbjct: 334 SESAALIGLYHGQVACKK----NRFGTPEREVKTLAILGAGLMGAGIAQVTVDKGVHTIL 389
Query: 337 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 396
K+ L +G + + + + +T + + L L G LDY F+ DMVIEAV
Sbjct: 390 KDTTQAGLARGEQQVYKGLNDKTKKRSITSFERDATLSNLTGTLDYRGFEKADMVIEAVF 449
Query: 397 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456
E + +K + E+E PPHCI A+NTS + + + + D+++G H+FSP M LL
Sbjct: 450 EDISIKHAVLKEVEAVVPPHCIFASNTSALPIKEIAAASKRPDKVVGMHYFSPVDKMQLL 509
Query: 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 516
EI+ TE+TS + VG KV +VVG+ GF R P A ++ GVD
Sbjct: 510 EIITTEKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGVDPK 569
Query: 517 RIDSAIRSFGLPIG 530
++D+ SFG P+G
Sbjct: 570 KLDALTTSFGFPVG 583
>gi|170593881|ref|XP_001901692.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase [Brugia malayi]
gi|158590636|gb|EDP29251.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase, putative [Brugia
malayi]
Length = 728
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 279/548 (50%), Gaps = 38/548 (6%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA-----IVLTGNGGR 60
VT+++ D VA++ + P NA + + D SR D A ++++G
Sbjct: 10 VTLKI-EDNVAVVKIDLP--NAKENVLNEAVADDLRYCMSRIDADASIKGVVIISGKPNT 66
Query: 61 FSGGFDINVFQKVHGAGDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI + K + D + D + + IE+ ++P+VAA+ G +GGGLELA+
Sbjct: 67 FIAGADIEMLSKCKSSADARKISSDAQRDFL--QIENSQRPVVAAIMGTCMGGGLELALA 124
Query: 120 CHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RIA PKT LPE+ LG++PG GGTQRLP+LV +++A+ MML K++++ + K+
Sbjct: 125 CHYRIAMNVPKTLFALPEVKLGLLPGAGGTQRLPKLVSITEALGMMLTGKTLSAIKAKKI 184
Query: 178 GLIDAVVT----------SEELLKVSRLWALDIAARRKPWIRS----LHRTDKLGSLSEA 223
GLID VV + ++ L++ R W ++ L RT
Sbjct: 185 GLIDRVVQPIGAGVKPAEDNNYDYLEQMSVLEVNRRGSLWEKTTNYVLTRTPIFKHF--- 241
Query: 224 REVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 282
+LK AR K T N P LDVIE G+ G G ++E++ F +L + L
Sbjct: 242 --ILKKARENVTKMTFGNYPAPLKILDVIESGVTRGPDLGYMEESEAFGDLTQTTQCKAL 299
Query: 283 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342
+ +F + + G + + + K+A+IG GLMG+GIA I +I L + + E
Sbjct: 300 IGIFKGRTECRR----NKFG-EAKKIDKLAIIGAGLMGAGIANVSIDKDIQTYLLDRDDE 354
Query: 343 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 402
L +G I + G+V R K+T + + + LK Y + D D+ IEAV E +PLK
Sbjct: 355 GLARGQNQIHKHYDGMVKRKKITDYQRHKFMANLKTTCTYDDLHDCDVAIEAVFEELPLK 414
Query: 403 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 462
I +LE P HCI+A+NTS + + + ++ +RIIG H+FSP M LLEI+ T+
Sbjct: 415 HGIIKKLESVVPEHCIIASNTSALPITEIASASTRPERIIGMHYFSPVERMELLEIITTK 474
Query: 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 522
TS + I + +G K+ VVV +C GF V R P L+ GV ID
Sbjct: 475 DTSKETIAVAVQLGLTQNKLVVVVKDCPGFFVVRCLAPMMSEVVRLLQEGVYPDEIDQMT 534
Query: 523 RSFGLPIG 530
+ +G P+G
Sbjct: 535 KQYGFPVG 542
>gi|423199920|ref|ZP_17186500.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER39]
gi|404621145|gb|EKB18035.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER39]
Length = 716
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 290/546 (53%), Gaps = 27/546 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRTVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ K+ LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKSVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGSLSEAREVL- 227
KLGL+D VV LL A+ +A + KP R L T+KLG R+VL
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLETNKLG-----RKVLF 231
Query: 228 -KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
+ ++ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +F
Sbjct: 232 DQASKGVKAKTRGNYPAPERILEVVRIGVEEGMKAGLAAESRHFGELVMTAESAALRSIF 291
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLL 345
FA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 292 FATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIG 349
Query: 346 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 405
++ + + R + + + + ML G LDYS F VDMV+EAV E + LK ++
Sbjct: 350 NAMRYSYDILAKKLKRRHILRSELEKQMSMLTGTLDYSGFHRVDMVVEAVFEDLNLKHQM 409
Query: 406 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465
++E+ C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TS
Sbjct: 410 VKDVERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTS 469
Query: 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 525
A+ + + + K P+VV + GF VNR PY A LV G V +DSA+ F
Sbjct: 470 AETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDF 529
Query: 526 GLPIGP 531
G P+GP
Sbjct: 530 GFPVGP 535
>gi|417703011|ref|ZP_12352122.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-218]
gi|333001871|gb|EGK21437.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-218]
Length = 611
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 285/535 (53%), Gaps = 16/535 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGL E+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLSEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSD 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
P + V ++GGGLMG GIA + V +K++N + + +K + G
Sbjct: 303 ---APPAALNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|294146602|ref|YP_003559268.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677019|dbj|BAI98536.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 695
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 185/518 (35%), Positives = 279/518 (53%), Gaps = 24/518 (4%)
Query: 17 IITLINPPVNALAIP--IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
++ L N PVNAL+ V + +EA + IV+ G G F GG DI F
Sbjct: 13 VLRLSNGPVNALSAGNGFVDQIAAAVDEAAGDPACRVIVIAGAGRMFCGGADIGDFDGAP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
VS + DV + +E C+KP++ A+ G+ALGGGLELAM H RIA ++LGLP
Sbjct: 73 T--QVSRVRDV-----IAAVEACEKPVIMAIHGMALGGGLELAMAGHYRIAQAGSRLGLP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GGTQRLPRL+G A++MML K +T+E+ GL+D +V + +
Sbjct: 126 EVTLGLLPGAGGTQRLPRLIGAGAALDMMLSGKPVTAEQAASSGLVDRLVDDDVVEA--- 182
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA-CLDVIEE 253
AL++A P L RT L + E + R + + P C+ + +
Sbjct: 183 --ALEVARGAPP----LRRTGALPVPVDLAEAVDARRAKLRAGLSQAPARIVDCVAALSD 236
Query: 254 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313
+ +G+ EA++F EL+ + SRGL H FF +R +++P + R V
Sbjct: 237 DLA----AGLALEARLFGELMRSEASRGLRHAFFGERTVARIPGLAADVRPRDVRRVGVV 292
Query: 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373
GG LMG+GIA A + + V + E+ +E L K I ++ V +G++ QD A+ +
Sbjct: 293 GGG-LMGTGIALALLNAGVPVTMVELRAEALSKAEAAIRKTIQRDVEKGRIGQDAADARM 351
Query: 374 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433
+ + D+VIEAV E + +K+++FS L+ P ILA+NTST+DL+ +
Sbjct: 352 AAFTSATELEALAEADLVIEAVFEDMGVKKQVFSALDAITRPDAILASNTSTLDLDAIAA 411
Query: 434 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493
+ R++G HFFSPA++M LLE+VR T+ V+ M +GK I KV VV G C GF
Sbjct: 412 LVADPSRVVGLHFFSPANIMRLLEVVRGRDTAPDVLATAMALGKRIGKVGVVSGVCDGFI 471
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
NR F Y + L+ G +ID+A+ +G+ +GP
Sbjct: 472 GNRMFEEYLRQVYFLLEEGALPQQIDAAMERWGMAMGP 509
>gi|343513259|ref|ZP_08750368.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
gi|342793564|gb|EGU29356.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
Length = 704
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 293/538 (54%), Gaps = 14/538 (2%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE-ATSRDDVKAIVL-TGNG 58
+ A +T++ N I + N +N L ++ F E + +K +++ +G
Sbjct: 4 LKAFNLTIDEQNIAWLCIDVPNEKMNTLQAAFADEMESVFAELEQHKSALKGLIIHSGKP 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G D+ + A + + E+ L P+VAA+ G LGGGLELA+
Sbjct: 64 DNFVAGADVRMLDACQSAQEAQALATKGQEMFEKL-SKLSFPVVAAIHGPCLGGGLELAL 122
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
C R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ K
Sbjct: 123 ACDYRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKK 182
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 234
LG++DA V LL+V++ + D + K + + + R+V+ + A+
Sbjct: 183 LGVVDACVAPTILLEVAKQFVED---KDKAKHKVSTKEKLMAQTGFGRKVIFEQAAKKTQ 239
Query: 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294
+KT N P +A L+VI G+ HG G+ EA+ F ELVM + S+ L +FFA T++
Sbjct: 240 QKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNESKALRSIFFA---TTE 296
Query: 295 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 353
+ +P V+++AV+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 297 MKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKDVSNDGVLNALNYNFK 356
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
R L++ + + ++ L G +D+ F D+VIEAV E + LKQ++ +++E+
Sbjct: 357 LFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFEDLALKQQMVADIEQNA 416
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
P I ATNTS++ ++ + E+ + + +IG H+FSP MPL+E++ + TS Q I ++
Sbjct: 417 KPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEVIPHQTTSDQTISTVV 476
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K P+VV +C GF VNR PY A ++ G + ++D A+ G P+GP
Sbjct: 477 ELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQLDGALLDAGFPVGP 534
>gi|423141010|ref|ZP_17128648.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053564|gb|EHY71455.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 715
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++ + P VN L A ++ ++ + ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENNALQGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I+ P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGHCQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D
Sbjct: 127 ICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R+L +++ G L A + + A+KT
Sbjct: 187 DVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + +DVIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTTQSQALRAIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L +L G DY F D+VIEAV E + LKQ++ +E+E+ C H I
Sbjct: 361 RRRHMKTSERDKQLALLSGSTDYRGFSHRDLVIEAVFEDLSLKQQMVAEVEQNCASHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + K + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|300918485|ref|ZP_07135079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
115-1]
gi|432534611|ref|ZP_19771586.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE234]
gi|300414345|gb|EFJ97655.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
115-1]
gi|431060247|gb|ELD69581.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE234]
Length = 714
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GNTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|218695940|ref|YP_002403607.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 55989]
gi|407470221|ref|YP_006783336.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481116|ref|YP_006778265.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2011C-3493]
gi|410481663|ref|YP_006769209.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2050]
gi|417805893|ref|ZP_12452842.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. LB226692]
gi|417833639|ref|ZP_12480087.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 01-09591]
gi|422988455|ref|ZP_16979228.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C227-11]
gi|422995346|ref|ZP_16986110.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C236-11]
gi|423000469|ref|ZP_16991223.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 09-7901]
gi|423004138|ref|ZP_16994884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 04-8351]
gi|423010663|ref|ZP_17001397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-3677]
gi|423019890|ref|ZP_17010599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4404]
gi|423025057|ref|ZP_17015754.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4522]
gi|423030878|ref|ZP_17021566.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4623]
gi|423038704|ref|ZP_17029378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423043823|ref|ZP_17034490.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423045552|ref|ZP_17036212.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423054091|ref|ZP_17042898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423061066|ref|ZP_17049862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429719935|ref|ZP_19254866.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429771818|ref|ZP_19303840.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02030]
gi|429776762|ref|ZP_19308740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429785490|ref|ZP_19317387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02092]
gi|429791380|ref|ZP_19323236.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02093]
gi|429797207|ref|ZP_19329014.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02281]
gi|429798804|ref|ZP_19330604.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02318]
gi|429807317|ref|ZP_19339043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02913]
gi|429812217|ref|ZP_19343902.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03439]
gi|429817738|ref|ZP_19349378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-04080]
gi|429822949|ref|ZP_19354546.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03943]
gi|429908464|ref|ZP_19374428.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429914335|ref|ZP_19380283.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429919366|ref|ZP_19385298.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429925185|ref|ZP_19391099.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429929122|ref|ZP_19395024.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429935661|ref|ZP_19401547.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429941341|ref|ZP_19407215.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429944021|ref|ZP_19409884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429951621|ref|ZP_19417467.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429954934|ref|ZP_19420766.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0466]
gi|254788661|sp|B7LBJ5.1|FADJ_ECO55 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218352672|emb|CAU98453.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli 55989]
gi|340734521|gb|EGR63651.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 01-09591]
gi|340739805|gb|EGR74037.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. LB226692]
gi|354862181|gb|EHF22619.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C236-11]
gi|354867466|gb|EHF27888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C227-11]
gi|354869585|gb|EHF29995.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 04-8351]
gi|354873440|gb|EHF33817.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 09-7901]
gi|354880146|gb|EHF40482.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-3677]
gi|354889570|gb|EHF49819.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4404]
gi|354893165|gb|EHF53369.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4522]
gi|354895302|gb|EHF55491.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354897576|gb|EHF57734.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4623]
gi|354898937|gb|EHF59088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354912988|gb|EHF72986.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354915993|gb|EHF75969.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917908|gb|EHF77870.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|406776825|gb|AFS56249.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053413|gb|AFS73464.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2011C-3493]
gi|407066256|gb|AFS87303.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2071]
gi|429348666|gb|EKY85427.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02092]
gi|429360075|gb|EKY96735.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02030]
gi|429361885|gb|EKY98537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02093]
gi|429362027|gb|EKY98676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429362157|gb|EKY98805.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02281]
gi|429365047|gb|EKZ01664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02318]
gi|429375778|gb|EKZ12311.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02913]
gi|429379072|gb|EKZ15578.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03439]
gi|429380423|gb|EKZ16914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03943]
gi|429391954|gb|EKZ28356.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-04080]
gi|429405339|gb|EKZ41605.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429410853|gb|EKZ47074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429414565|gb|EKZ50740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421174|gb|EKZ57296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429429508|gb|EKZ65577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429432195|gb|EKZ68235.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429436401|gb|EKZ72417.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429438606|gb|EKZ74599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429448228|gb|EKZ84145.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429451228|gb|EKZ87119.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429457891|gb|EKZ93729.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0466]
Length = 714
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTACKVG-LPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+ + FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAVLVKFGFPVGPIQ 534
>gi|375262109|ref|YP_005021279.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca KCTC 1686]
gi|365911587|gb|AEX07040.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca KCTC 1686]
Length = 714
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 276/537 (51%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDASGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLQT----AIELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 356
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADADPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFEDLTLKQKMVSEVEQHCRPE 417
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|340000113|ref|YP_004730996.1| fatty acid oxidation complex alpha subunit [Salmonella bongori NCTC
12419]
gi|339513474|emb|CCC31227.1| putative fatty acid oxidation complex alpha subunit [Salmonella
bongori NCTC 12419]
Length = 715
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++ + P +N L A ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRPDNVAVVAIDVPGEKMNTLKTEFAAQVRALLKQIRENKTLQGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I+ P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIDACQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGISTALDMILTGKQLRARQALKTGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R L +++ G L A + + A+KT
Sbjct: 187 DVVPQSILLEA----AVELAKKERLAQRRLPVRERILAGPLGRALLFRLVRKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + +DVIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTQVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAPPGPLHSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASQRDKQLSLISGSTDYRGFSHRDVVIEAVFEDLALKQQMVAEVEQHCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ ++ + + ++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAANAARPQQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVQLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>gi|425068598|ref|ZP_18471714.1| fatty oxidation complex, alpha subunit FadJ [Proteus mirabilis
WGLW6]
gi|404599306|gb|EKA99764.1| fatty oxidation complex, alpha subunit FadJ [Proteus mirabilis
WGLW6]
Length = 722
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 287/541 (53%), Gaps = 19/541 (3%)
Query: 3 APRVTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGG 59
+P V D V IIT+ ++ VN L V ++ ++A VK +++T G
Sbjct: 14 SPVFQFSVRPDKVGIITINVVDEKVNTLKAAFVEQFQNVLKQAQQHSGVKGLIITSGKPD 73
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI++ + + + +L L E+ P+VAA+ G LGGGLELA+
Sbjct: 74 NFIAGADISMIADCKTKEEATALAKAGQDLFTQL-ENYPLPVVAAINGACLGGGLELALA 132
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI + KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L + I ++ +KL
Sbjct: 133 CHGRICSDNSKTRLGLPEVQLGLLPGSGGTQRLPRLIGVTTALDMILTGRQINAKRAFKL 192
Query: 178 GLIDAVVTSEELLKVSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQ 233
GL+D VV LL V+ W L AA+++ + LG R +L + +
Sbjct: 193 GLVDDVVPQAILLDVAAQWILTAKKAAKKQTIMERFWANTTLG-----RNILFDQAKKRT 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT + P + L VIE G+ +G +EA F EL M S L H+FFA A
Sbjct: 248 LAKTKGHYPAAERILHVIERGLEKDIQTGFKEEANAFGELAMTPVSSALRHLFFASTA-- 305
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP + + ++GGGLMG GIA N+ V +K+++ + + + +
Sbjct: 306 -LKNETGSSAKPDNLHHIGILGGGLMGGGIAFVTATKGNLPVRIKDISDKGIAQALNYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + +L+ + + +L G LDYS F D+++EAV E + LKQK+ +++E
Sbjct: 365 KALSTKVKKKRLSARERQRQMGLLSGTLDYSGFHQTDLIVEAVFEDLALKQKMVADIEAL 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + EK ++IIG H+FSP MPL+E++ E+T A+ I
Sbjct: 425 GEGKIIFASNTSSLPIHKIAEKAQYPEKIIGLHYFSPVEKMPLVEVIPHEKTDAKTIATT 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K KV +VVG+ GF VNR PY A + G + ID A+ FG P+GP
Sbjct: 485 VAFAKKQGKVAIVVGDKPGFYVNRILAPYISEALTCLVEGETIENIDKALVQFGFPVGPI 544
Query: 533 Q 533
Q
Sbjct: 545 Q 545
>gi|442592050|ref|ZP_21010030.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441608203|emb|CCP99056.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
Length = 714
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTSIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|402841335|ref|ZP_10889788.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. OBRC7]
gi|402283357|gb|EJU31873.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. OBRC7]
Length = 714
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 20/536 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F G
Sbjct: 9 LEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R+
Sbjct: 69 ADINMIARCHSAEEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRV 127
Query: 125 AAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 CSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPN 240
VV LL+ A+++A + +P R++ +++ G L + +A+ KT N
Sbjct: 188 VVPQTILLQT----AIELALKGRPASRTVPARERILAGPLGCSLLFRLVAKKTHHKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVRG 357
G V +V G G A++ + V +K++ + +K +
Sbjct: 299 RGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLDK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V R L + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 359 QVRRRYLRASERERQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQYCSPET 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + + K
Sbjct: 419 IFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 479 LQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|359394875|ref|ZP_09187928.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
gi|357972122|gb|EHJ94567.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
Length = 699
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 286/523 (54%), Gaps = 20/523 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AIITL NPPVN+ + G+ ++ ++ +A+VL G G G D+ +++
Sbjct: 22 IAIITLDNPPVNSSNDAVRRGILAALDKIDTQQ-CRAVVLMGKGPNLMAGADL---RELE 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P V+ L + P++A + G LGGGLELA+ C +RIA P LGLP
Sbjct: 78 NEPTEPTLPQVTAALSAFPL-----PVIAVISGHTLGGGLELALACDSRIATPTALLGLP 132
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+T+GVIPG GGTQRLPR+VGL+KA+EM++ K IT+ + K+GL+D ++ + E + S
Sbjct: 133 EVTVGVIPGAGGTQRLPRVVGLAKALEMIVSGKPITALDAHKVGLVDELLHATEG-EASD 191
Query: 195 LWALD----IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
A D A R + + L D + +A +V ++ +L A+ +P +V
Sbjct: 192 TEAFDQVLAYANRYQGGKQPLAERDVPPADEQALQV-QVNKLLARTR--GLPAAPVAAEV 248
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 310
+ + H +G+ E F L ++++ L ++FFA+R P ++ V +
Sbjct: 249 VMQAATHSFSAGIADERAQFLALRGSESAQALRYLFFAEREKPFEPTQH---VQAAQVSR 305
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370
++V+G G MGSGIA + V L E+N + L G+ I + V R LTQ + +
Sbjct: 306 ISVVGAGTMGSGIALCALNAGYSVDLLELNDKALEAGVARITQALDEGVKRQLLTQAQRD 365
Query: 371 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430
++L LK E D+VIEA++E + +K+ +F++L K +LA+NTS +D++
Sbjct: 366 SSLSRLKPTQQLPEVAGTDLVIEAIVEDLAIKRSLFADLAKWVSESTLLASNTSYLDIDQ 425
Query: 431 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490
+ E +R++G HFFSPA MPL+EIVR + TS Q + ++V + +KK +VV N
Sbjct: 426 IAEGIPHPERVLGLHFFSPADRMPLMEIVRCQITSEQTLSTAVSVARRLKKKAIVVANSW 485
Query: 491 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GF NR + Y + ++ G +ID+A+ ++G +GPF+
Sbjct: 486 GFVGNRLYAAYRRQCEFMLEEGASPEQIDAALEAYGFAMGPFK 528
>gi|431802538|ref|YP_007229441.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
gi|430793303|gb|AGA73498.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
Length = 694
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 266/525 (50%), Gaps = 27/525 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
V +I + NPPVNAL+ + L + E+A D++AIV+ G F G DI F
Sbjct: 13 VGLIIINNPPVNALSREVREQLLARLEQAVGDVDIRAIVIVCEGRTFIAGADIKEFDLPL 72
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
Q H +PDV + IE KP++AA+ G LGGGLELA+ CH RIAAP TQ
Sbjct: 73 QAPH-------LPDV-----LTAIEQSPKPVIAAMHGSVLGGGLELALACHYRIAAPGTQ 120
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
GLPE+ LG+IPG GGTQRLPRL G+ A+++++ + E+ ++GL+D + S +
Sbjct: 121 FGLPEVGLGLIPGAGGTQRLPRLCGMLPAVDVVMGGEQPGVEQALEMGLLDRLSRSS-VF 179
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
+ + +A +I +P R +RT ++ + R L +L ++ P L
Sbjct: 180 ESALEFAQEIIG--QPIPRCCNRTVSAFDPAVFQRRAQAILHKLVGQEAPP------LAL 231
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 308
++ Y G+ E +F +R L HVFFA+R + R V
Sbjct: 232 QALQAAWQVPFYEGMALERDIFISRRESAQARALRHVFFAERDLASRRRTLARQAPVRAV 291
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
VAVIG G MGSGIA I VL + L +G +E + +G+L+ +K
Sbjct: 292 DSVAVIGAGTMGSGIALCLANAGIATVLIDTQPAALDRGRAAVERYYVSALEKGRLSSEK 351
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
A ++ D++IEAV E + +KQ +F L++ P ILATNTS +D+
Sbjct: 352 AAEHAGHIRYEGSLEAIAGADLIIEAVFEDLAVKQDVFRTLDRFAKPGAILATNTSYLDV 411
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + T +IG HFFSPAHVM LLE+V+T V+ ++ +G + K V VG+
Sbjct: 412 DAIASVTDRPGDVIGMHFFSPAHVMKLLEVVKTAHLHPDVLATVLQLGGRLGKTAVAVGH 471
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR + A L+ G +D +R FG PIGPF+
Sbjct: 472 CYGFVGNRLLAVREREATFLLEEGASPEDVDRVLRGFGFPIGPFE 516
>gi|419143293|ref|ZP_13688031.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6A]
gi|377993806|gb|EHV56937.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6A]
Length = 714
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQ LPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQCLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>gi|417602951|ref|ZP_12253521.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_94C]
gi|345350617|gb|EGW82892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_94C]
Length = 714
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G +G EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSTGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|432627994|ref|ZP_19863970.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
gi|431162605|gb|ELE63046.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
Length = 714
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG +GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFQVGPIQ 534
>gi|323493352|ref|ZP_08098475.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
gi|323312438|gb|EGA65579.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
Length = 706
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 269/476 (56%), Gaps = 9/476 (1%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSASEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCSDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
+ DAVV LL+V++ + + K ++ + + + R+V+ + A+ +K
Sbjct: 185 VADAVVPQTVLLEVAKSFVEKHTGKSKAKRKASTKEKLIANTGLGRKVIFDQAAKKTREK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L+VI G+ G G KEA+ F ELVM + S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFGELVMTNESKALRSIFFA---TTEMK 301
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
P+ + + AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KENGSYADPKALERAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R L++ + + + L G D++ F D+VIEAV E + LKQ++ +++E+
Sbjct: 362 EKQRKRRILSKAQLQSKMLQLSGGTDFTTFNHTDIVIEAVFEDLQLKQQMVADVEENAKD 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ ++ + EK + + ++G H+FSP MPL+E++ E TSA+ I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAARPENVVGLHYFSPVEKMPLVEVIPHEGTSAETISTVVEF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV +C GF VNR PY A ++ G + ++D+A+ +FG P+GP
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQLDTALLNFGFPVGP 537
>gi|260776409|ref|ZP_05885304.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607632|gb|EEX33897.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 707
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 283/514 (55%), Gaps = 11/514 (2%)
Query: 25 VNALAIPIVAGLKDKFEE-ATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLM 82
+N L ++D F + + VK +++ F G D+ + + A + +
Sbjct: 28 MNTLQAAFAQEMEDIFTQLKEKKSSVKGLIVHSLKPDNFIAGADVRMLDACNSASEAQAL 87
Query: 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--APKTQLGLPELTLGV 140
+ ++ L D P++AA+ G LGGGLELA+ C R+ + KT+LGLPE+ LG+
Sbjct: 88 AEQGQQMFQQL-SDLPYPVIAAIHGPCLGGGLELALACDYRVCTNSDKTRLGLPEVQLGL 146
Query: 141 IPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI 200
+PG GGTQRLPRL+GL +++M+L K + +++ KLG++DAVV LL+V++ +
Sbjct: 147 LPGSGGTQRLPRLIGLLPSLDMILTGKQLRAKKAKKLGVVDAVVPETILLEVAKSFVEKH 206
Query: 201 AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHG 258
A + + + + + + R+V+ + ++ +KT N P +A L+VI G+ G
Sbjct: 207 AGKSRAKRKVSTKEKLIANTGLGRKVIFEQASKKTIEKTRGNYPAAEAILEVIRHGLEKG 266
Query: 259 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 318
G KEA+ F ELVM S+ L +FFA T+++ +P+ + + AV+GGGL
Sbjct: 267 FEKGQQKEAQRFGELVMTSESKALRSIFFA---TTEMKKENGSDAEPKAIERAAVLGGGL 323
Query: 319 MGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 377
MG+GI+ + + V +K+V+++ +L +K R +++ + + + +
Sbjct: 324 MGAGISHVSVSKAKVPVRIKDVSNDGVLNALKYNYKLFDKQRKRRIISKAQLQSKMLQMS 383
Query: 378 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 437
G D++ F D+V+EAV E + LKQ++ +++EK I ATNTS++ ++ + +K
Sbjct: 384 GGTDFTSFNHADVVVEAVFEDLNLKQQMVADVEKNAKDTTIFATNTSSLPIHQIADKAQR 443
Query: 438 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497
+ I+G H+FSP MPL+E++ E TS + I ++ + K P+VV +C GF VNR
Sbjct: 444 PENIVGLHYFSPVEKMPLVEVIPHETTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRI 503
Query: 498 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
PY A ++ G + ++D A+ +FG P+GP
Sbjct: 504 LAPYMNEAAQVLMSGEPIEQLDKALLNFGFPVGP 537
>gi|419154746|ref|ZP_13699309.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6C]
gi|377997328|gb|EHV60435.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6C]
Length = 712
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQ LPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQCLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 532
>gi|56412715|ref|YP_149790.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197361649|ref|YP_002141285.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|81359559|sp|Q5PCX6.1|FADJ_SALPA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788614|sp|B5BBA1.1|FADJ_SALPK RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|56126972|gb|AAV76478.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197093125|emb|CAR58569.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 715
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|42523321|ref|NP_968701.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
gi|39575527|emb|CAE79694.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
Length = 717
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 281/534 (52%), Gaps = 13/534 (2%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
G V L+ VN + P++ LK+ EE + KA++ N + F G DI
Sbjct: 13 GEVAVVEFDLVGEKVNKFSTPVMMRLKEVVEE-LKKSSYKAVIFKSNKPKIFIAGADIEE 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ + A + E V++++ED P +AAV G +GGG E + C RIA+
Sbjct: 72 IKSMTKAEEFEAAVKGGQE-VISMVEDLPMPTIAAVNGACMGGGCEFILACDYRIASEDS 130
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
T++GLPE+ LG++PGFGG R+PR++GL A++++L KS+ S++ K+GL+D VV
Sbjct: 131 STKIGLPEIQLGILPGFGGCIRMPRVIGLQAALDIILAGKSVNSKKALKIGLVDKVVHPN 190
Query: 188 ELLKVSRLWALDIAA-----RRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKTAPNM 241
L S WA +I A RRK + L S V K AR K T +
Sbjct: 191 LLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVILESALGRSIVFKKAREGVLKATKGHY 250
Query: 242 PQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P L+VI++ L+ E + F +L + D S+ L+HVF+ K V
Sbjct: 251 PAPLQALEVIQKTYGMSDRDAALRIEREGFCKLGVTDISKNLIHVFYLTEMVKKQNGVPG 310
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+ +KPR V+ + V+G G MG GIA I V +K++N++ L KG+K LV
Sbjct: 311 VDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQVRMKDLNTDALGKGLKHASDLWMKLVK 370
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
R + + + + ++ DY+ FK++D+V+EA++E + +KQK+ E P I+A
Sbjct: 371 RKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEAIVEDMGIKQKVIGECAGQMRPDAIIA 430
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS++ + + + + G HFF+P + MPL+E++R E+TS + I + + K +
Sbjct: 431 TNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMPLIEVIRGEKTSDETIATIYELSKKMG 490
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA-IRSFGLPIGPFQ 533
K+PVVV + GF VNR PY A L+ G+ + +D ++ FG+P+GPF+
Sbjct: 491 KMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMSIEFVDKVYVKEFGMPMGPFE 544
>gi|432932478|ref|XP_004081759.1| PREDICTED: peroxisomal bifunctional enzyme-like [Oryzias latipes]
Length = 717
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 283/527 (53%), Gaps = 29/527 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +ITL+NPPVNAL+ + G+ D ++A S VK++V+ G+ G+F GG DI F
Sbjct: 11 VGLITLLNPPVNALSAAVRQGIVDTMDKALSDRKVKSVVICGHNGKFCGGADIREFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S + + ++ +E KP+VAA+EG+ALGGGLELA+GCH RIA K +LGLP
Sbjct: 68 -----SPLTGPPLIPLIQGVESAAKPVVAAIEGVALGGGLELALGCHYRIAHSKARLGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLK 191
E+ LG++PG GG+QRLPRL+G+ A++++ + +T E +LGL+D V T +E +K
Sbjct: 123 EVHLGLLPGAGGSQRLPRLIGVPAALDLITTGRHVTGAEALQLGLVDKVTDRNTVDEAVK 182
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT-APNMPQHQACLDV 250
+ A R+ R L +L E ++ R +A+ AP AC+
Sbjct: 183 FALSVADQPPNSRRVSTFPCPRHPDLDALFEG--AMQRVRQRARGALAPV-----ACVQA 235
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPRG 307
+ G+ +E ++ L +R + FFAQRA + +P+ KP
Sbjct: 236 VRAAATLPYAQGMERERELMATLFTSGQARAQQYHFFAQRAVGRWSMPSGARWDTTKPGA 295
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV-RGLVTRGKLTQ 366
V K VIG G MG GI+ A + + VV E N + L++ + I + + RG RG
Sbjct: 296 VHKAMVIGLGTMGRGISVALVQAGVSVVAMETNEKQLMEAKQAISSMLERGAKRRG---- 351
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
AL + + DVD+VIEAV E + LK+K+F +L C P L +NTS +
Sbjct: 352 --VAPALDKIGYSSNMEPAADVDLVIEAVFEDMALKKKVFQQLSALCKPGTFLCSNTSGL 409
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + +T + ++G HFF+PAHVM LLE+V R+S Q + M +GK + KV V V
Sbjct: 410 DIDQLASETRHPELVVGMHFFAPAHVMKLLEVVYGSRSSPQAVATAMELGKQMGKVSVAV 469
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GNC GF NR PY + A L+ G +D + FG +G F+
Sbjct: 470 GNCRGFVGNRMLKPYLEQAFFLLEEGTTPEFVDQVLEEFGFAMGVFR 516
>gi|445157952|ref|ZP_21393096.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
HWS51]
gi|444846033|gb|ELX71215.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
HWS51]
Length = 597
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|354724370|ref|ZP_09038585.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter mori LMG 25706]
Length = 715
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 285/532 (53%), Gaps = 22/532 (4%)
Query: 13 DGVAIITLINP--PVNAL----AIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
D VA+IT+ P +N L + + A LK E T R + ++ F G D
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLKQLRENKTIRG---LVFISAKPDNFIAGAD 70
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
IN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 71 INMIARAQSAQEAEELARQGQQVMAE-IHALSFPVIAAIHGACLGGGLELALACHSRICT 129
Query: 127 --PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K+GL+D VV
Sbjct: 130 DDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKVGLVDEVV 189
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMP 242
LL+ A+++A + + R L +++ G L A +++ +KT N P
Sbjct: 190 PHSILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRALLFNMVSKKTEQKTKGNYP 245
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+ L+VIE G+ G SG EAK F EL M S+ L +FFA K P
Sbjct: 246 AAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASIDVKKDPGSE--- 302
Query: 303 LKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+P +R V V+GGGLMG GIA + V +K++N + + ++ N+ V R
Sbjct: 303 AEPAPLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDQKVKR 362
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+
Sbjct: 363 RHIKASERDKTLSMITGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFAS 422
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS++ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K K
Sbjct: 423 NTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTVATVVKLAKKQGK 482
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
P+VV + GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 483 TPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|348519918|ref|XP_003447476.1| PREDICTED: peroxisomal bifunctional enzyme-like [Oreochromis
niloticus]
Length = 719
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 286/527 (54%), Gaps = 29/527 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +ITL +PPVNAL+ + G+ D + A S +VK++V+ G G FSGG DI F
Sbjct: 11 VGLITLQSPPVNALSAAVRQGIVDSMQRALSEPEVKSVVICGQNGIFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +S P + + ++ IE KP+VAA+EG+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 67 -GGQMSGPPLIPM---IHAIEAASKPVVAAIEGIALGGGLELALGCHYRIAHSKARVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLG++PG GG+QRLPRL+G+ A++++ + +T+ E K GL+D + T + V+
Sbjct: 123 EVTLGLLPGAGGSQRLPRLIGVPAALDLITTGRYVTAAEALKFGLVDQI-TDHNTVNVAV 181
Query: 195 LWALDIA-----ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
+A +A ARR L D + L E EV++ R A+ + AC+
Sbjct: 182 KFAQRVAGQPLDARRISTYPCLCPPD-VDVLFE--EVMQRVRRTARGAIAPI----ACVQ 234
Query: 250 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPR 306
+ G+ +E ++ L +R L + FFAQRA + +P+ KPR
Sbjct: 235 AVRAAATLPYNQGMERERELMATLFTSGQTRALQYFFFAQRAVGRWSMPSGARWDTSKPR 294
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
V K AVIG G MG GI A VV E + L++ + I G++ RG +
Sbjct: 295 PVHKAAVIGLGTMGRGITVALAQAGFSVVAVETQEKQLMEAKQAIS----GMLERGAKRR 350
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
A AL + + DVD+VIEAV E + LK+K+F +L C L +NTS +
Sbjct: 351 GVAP-ALDKINYGCNIQSVADVDLVIEAVFEDMALKKKVFQQLSAVCKAGTFLCSNTSGL 409
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
D++ + +T + + ++G HFF+PAHVM LLE+V ++S + M +GK I KV V V
Sbjct: 410 DIDQLACQTRNPELVVGMHFFAPAHVMKLLEVVYGPKSSPLAVATAMQLGKKIGKVSVAV 469
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
GNC GF NR PY + A L+ G +D + FG +G F+
Sbjct: 470 GNCRGFVGNRMLKPYLEQALFLLEEGATPEFVDQVLEEFGFAMGVFR 516
>gi|410647349|ref|ZP_11357783.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
gi|410133052|dbj|GAC06182.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
Length = 656
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 264/493 (53%), Gaps = 19/493 (3%)
Query: 43 ATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIV 102
A + ++ IVL G F G DI F K +P V EL ++ KPIV
Sbjct: 4 ALANPEIDGIVLQCLGKTFIAGADILEFGK---PPQPPHLPSVLSEL-----QNSPKPIV 55
Query: 103 AAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162
AA+ G LGGG E A+ CH R+A T++GLPE+ LG+IPG GGTQ LPR+ + AIE+
Sbjct: 56 AALFGTVLGGGFETALSCHYRVALTGTKVGLPEVNLGLIPGAGGTQLLPRVCEVESAIEL 115
Query: 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222
+ K I G++D +V+ + +LK A ++P I + K+G +
Sbjct: 116 ITSGKHIDIASPQAKGIVDKIVSDDLVLKTIEF--AQQVALKQPVIATPLLNVKMGEAED 173
Query: 223 ---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
A+ KLA+ + AP Q+ +D IE + G+ KE + F S
Sbjct: 174 TIFAQYRAKLAKRARGQQAP-----QSAIDSIENALNLPFNQGLKKEREYFLSCRESTES 228
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ H FFA++A K P + ++P + ++A+IG G MG GIA + + V+L E
Sbjct: 229 AAMRHAFFAEKAAVKYPATLN-KIEPLHIEQIAIIGAGTMGGGIAMSFLDRGYPVILVET 287
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
+ E L +G I + +V +++Q++ + LKM+K Y + DVD+VIEA ES+
Sbjct: 288 SEENLARGTSGITERYKKMVLSKRISQEQMDIRLKMMKATCCYDDLHDVDLVIEAAFESM 347
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
+K++IF +L+ C P ILA+NTS +D+ + E T+ ++++G HFFSPA++M LLEIV
Sbjct: 348 EVKREIFRKLDAVCKPQTILASNTSYLDIEEIAESTARPEKVLGMHFFSPANIMKLLEIV 407
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
R + TS ++ + + K I K+ VVG C GF NR + Y + A L+ G +ID
Sbjct: 408 RCKETSETTLISAVALAKHIGKISSVVGMCYGFVGNRMYSCYGREANSLLLEGATPSQID 467
Query: 520 SAIRSFGLPIGPF 532
A+ +G+ +GP
Sbjct: 468 QAMVDWGMAMGPL 480
>gi|227356169|ref|ZP_03840558.1| 3-hydroxybutyryl-CoA epimerase [Proteus mirabilis ATCC 29906]
gi|227163633|gb|EEI48549.1| 3-hydroxybutyryl-CoA epimerase [Proteus mirabilis ATCC 29906]
Length = 722
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 287/541 (53%), Gaps = 19/541 (3%)
Query: 3 APRVTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGG 59
+P V D V IIT+ ++ VN L V ++ ++A VK +++T G
Sbjct: 14 SPVFQFSVRPDKVGIITINVVDEKVNTLKAAFVEQFQNVLKQAQQHSGVKGLIITSGKPD 73
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI++ + + + +L L E+ P+VAA+ G LGGGLELA+
Sbjct: 74 NFIAGADISMIADCKTKEEATALAKAGQDLFTQL-ENYPLPVVAAINGACLGGGLELALA 132
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI + KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L + I ++ +KL
Sbjct: 133 CHGRICSDNSKTRLGLPEVQLGLLPGSGGTQRLPRLIGVTTALDMILTGRQINAKRAFKL 192
Query: 178 GLIDAVVTSEELLKVSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQ 233
GL+D VV LL V+ W L AA+++ + LG R +L + +
Sbjct: 193 GLVDDVVPQVILLDVAAQWILTAKKAAKKQTIMERFWANTTLG-----RNILFDQAKKRT 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT + P + L VIE G+ +G +EA F EL M S L H+FFA A
Sbjct: 248 LAKTKGHYPAAERILHVIERGLEKDIQTGFKEEANAFGELAMTPVSSALRHLFFASTA-- 305
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP + + ++GGGLMG GIA N+ V +K+++ + + + +
Sbjct: 306 -LKNETGSSAKPDNLHHIGILGGGLMGGGIAFVTATKGNLPVRIKDISDKGIAQALNYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + +L+ + + +L G LDYS F D+++EAV E + LKQK+ +++E
Sbjct: 365 KALSTKVKKKRLSARERQRQMGLLSGTLDYSGFHQTDLIVEAVFEDLALKQKMVADIEAL 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + EK ++IIG H+FSP MPL+E++ E+T A+ I
Sbjct: 425 GEGKIIFASNTSSLPIHKIAEKAQYPEKIIGLHYFSPVEKMPLVEVIPHEKTDAKTIATT 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K KV +VVG+ GF VNR PY A + G + ID A+ FG P+GP
Sbjct: 485 VAFAKKQGKVAIVVGDKPGFYVNRILAPYISEALTCLVEGETIENIDKALVQFGFPVGPI 544
Query: 533 Q 533
Q
Sbjct: 545 Q 545
>gi|421727178|ref|ZP_16166342.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca M5al]
gi|410371969|gb|EKP26686.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca M5al]
Length = 714
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 278/537 (51%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
V+ LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVLAQTILLQT----AVELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L V+E G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVMETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 356
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQIGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQHCRPE 417
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAQASRPQRVIGLHFFSPVDKMPLVEVIPHIGTDRQTIATAVKLA 477
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP Q
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQ 534
>gi|402589636|gb|EJW83567.1| fatty acid oxidation complex, partial [Wuchereria bancrofti]
Length = 760
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 281/556 (50%), Gaps = 44/556 (7%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA-----IVLTGNGGR 60
VT+++ D VA++ IN P NA + + D F +R D A ++++G
Sbjct: 61 VTLKI-EDNVAVLK-INLP-NAKENVLNEAVADDFRYCMNRIDADASIKGVVIISGKPNT 117
Query: 61 FSGGFDINVFQKVHGAGDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI + K + D + D + + IE ++P+VAA+ G +GGGLELA+
Sbjct: 118 FIAGADIEMLSKCKSSADARKISSDGQRDFL--QIEKSQRPVVAAIMGTCMGGGLELALA 175
Query: 120 CHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RIA PKT LPE+ LG++PG GGTQRLP+LV +++A+ MML K++++ + K+
Sbjct: 176 CHYRIAMNVPKTLFALPEVKLGLLPGAGGTQRLPKLVSITEALGMMLTGKTLSAGKAKKI 235
Query: 178 GLIDAVV---------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA----- 223
GLID +V E A+D+A + + ++R GSL E
Sbjct: 236 GLIDLIVQPIGAGVKPAEENNYDYLEQIAIDVARQLSMGVLEVNRR---GSLWEKTINYV 292
Query: 224 --------REVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 274
+LK AR K T N P LDV+E GI G G ++E++ F L
Sbjct: 293 LTKTPIFKHFILKKARESVTKMTFGNYPAPLKILDVVESGITRGPDLGYMEESEAFGYLT 352
Query: 275 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 334
+ L+ +F + + G + + + +AVIG GLMG+GIA I +I
Sbjct: 353 QTTQCKALIGIFKGRTECRR----NKFG-EAKKIDNLAVIGAGLMGAGIANVSIDKDIRT 407
Query: 335 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394
L + N E L +G I + G+V R K+T + + + LK Y + D D+ IEA
Sbjct: 408 YLLDRNDEGLARGQNQIHKHYDGMVKRKKITDYQRHKFMANLKTTCTYDDLHDCDVAIEA 467
Query: 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 454
V E +PLK +I +LE P HCI+A+NTS + + + ++ +RIIG H+FSP M
Sbjct: 468 VFEELPLKHEIIKKLESVVPEHCIIASNTSALPITEIASVSTRPERIIGMHYFSPVERME 527
Query: 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 514
LLEI+ T+ TS + I +G I K+ VVV +C GF V R P L+ GV
Sbjct: 528 LLEIITTKDTSKEAIAVAAQLGLIQNKLVVVVKDCPGFFVVRCLAPMMSEVVRLLQEGVY 587
Query: 515 VFRIDSAIRSFGLPIG 530
ID R +G P+G
Sbjct: 588 PDEIDEMTRQYGFPVG 603
>gi|333893918|ref|YP_004467793.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
gi|332993936|gb|AEF03991.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
Length = 712
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 291/536 (54%), Gaps = 18/536 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ ++GVAI+T+ P +N L + ++ + +K +VL +G F
Sbjct: 13 TLTKQDNGVAILTMDVPGESMNTLKAAFGDEISAMLDDIDADTSIKGVVLVSGKANSFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A D + + + + + IE K VAA+ G ALGGGLELA+ CH R
Sbjct: 73 GADISMLAACNTAEDATTIA-AGGQAIFDRIERMKATFVAAINGPALGGGLELALACHYR 131
Query: 124 IA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I +P TQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML +++ K G++D
Sbjct: 132 ICTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGAPARAKQAKKYGIVD 191
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA-KK 236
VV LLKV+ +AL +RKP + ++ DK L + R ++ K AR K
Sbjct: 192 DVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLENTGPGRGMMFKKAREATFAK 247
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA K
Sbjct: 248 TKGNYPAPGYIIDVIETGMRDGIEAGLKAEAEAFGKLVMTPESFQLRQIFFATTDMKKEN 307
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ G+ P ++KV V+GGGLMG GIA + V +K+V E + +K +
Sbjct: 308 GIE--GVAPEKMKKVGVLGGGLMGGGIAFVTSTKAGVPVRIKDVRPEGIANAMKYSYDIL 365
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
V + + + L ++ G LDYS ++D D+V+EAV E + LKQK+ +++E+ C
Sbjct: 366 NKKVKKRFMRSSEMQKQLSLITGTLDYSGYQDTDIVVEAVFEDLDLKQKMVADIEENCKE 425
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
+ I A+NTS+I + + K + + +IG H+FSP MPL E++ E TS QVI +
Sbjct: 426 NTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHETTSDQVISSTVEF 485
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 486 AKKQGKTPVVVKDGAGFYVNRILAPYMNEAASLILAGEPIEHIDKSLVKFGFPVGP 541
>gi|198244761|ref|YP_002216460.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|445147226|ref|ZP_21387982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
gi|254788649|sp|B5FPN1.1|FADJ_SALDC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|197939277|gb|ACH76610.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|444844769|gb|ELX69995.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
Length = 715
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|332242961|ref|XP_003270650.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 763
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 282/551 (51%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVIRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVIISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LGV+PG GGTQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGVLPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFRGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HC+ A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCVFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|15806500|ref|NP_295210.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
gi|6459246|gb|AAF11052.1|AE001993_2 enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
Length = 708
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 277/519 (53%), Gaps = 14/519 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V I+T+ NPPVNA + GLK + A + D VKA+V+ G G F G DI F
Sbjct: 28 VFILTINNPPVNAFGPGVPEGLKAGLDAAAADDSVKAVVIIGGGRTFVAGADIKGFGLPR 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
PD+ V ++ +KP VAA+ G ALGGGLELA+GC R+A QLGLP
Sbjct: 88 -----EQAPDLRG--TVAKLDAFEKPTVAAIHGTALGGGLELALGCTYRVAVKDAQLGLP 140
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LGV+PG GGTQRLPR+VG KA+EMML I + +LGL+D +V + L
Sbjct: 141 EVKLGVLPGAGGTQRLPRVVGAQKALEMMLSGNPIKAPAAKELGLVDEIVDGDLLAGAVA 200
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
AR P R R+ + GS EV AR KKT +D+ E
Sbjct: 201 FARAHADAR--PLPRVSERSVEGGSP----EVFAAAREGLKKTHRGQHSPSHIVDLAEMA 254
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314
G EA F + + SRGL H+FFA+R K+ ++ ++ +I
Sbjct: 255 ATKPFQEGWDAEADRFVDSLNSPQSRGLRHIFFAEREAGKIRGLSK-DTPTTDIKSAGII 313
Query: 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374
G G MG GIA + I V + E + E L +G+ I N +G++TQD +
Sbjct: 314 GAGTMGGGIAMNFLNVGIPVTIVETSQEALDRGLGVIRKNYENTAKKGRMTQDDVEKRMG 373
Query: 375 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 434
+L L + D++IEAV E++ +K+ IF+ L+K P ILA+NTST+D+N +
Sbjct: 374 LLTPTLKMEDLAGADIIIEAVFENMDVKKDIFTRLDKIAKPGAILASNTSTLDVNEIASV 433
Query: 435 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
T +++IG HFFSPA+VM LLEIVR ++TS V+ + + K IKKV VVVG C GF
Sbjct: 434 TGRPEQVIGLHFFSPANVMKLLEIVRADKTSDSVLATSLALAKRIKKVGVVVGVCDGFVG 493
Query: 495 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
NR Y AR +V G +D+A+ + GLP+GPFQ
Sbjct: 494 NRMVHRYGDEARKIVEEGARPEDVDAAMNALGLPMGPFQ 532
>gi|432527120|ref|ZP_19764213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE233]
gi|431063379|gb|ELD72628.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE233]
Length = 714
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 277/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPYSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ G P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKIGFPVGPIQ 534
>gi|418856693|ref|ZP_13411335.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392819202|gb|EJA75075.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
Length = 715
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + E K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRAREALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|375119946|ref|ZP_09765113.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326624213|gb|EGE30558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
Length = 708
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 300
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 527
>gi|436642235|ref|ZP_20516388.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
gi|434955981|gb|ELL49760.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22704]
Length = 591
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|336251395|ref|YP_004595105.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter aerogenes KCTC 2190]
gi|334737451|gb|AEG99826.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter aerogenes KCTC 2190]
Length = 714
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 291/542 (53%), Gaps = 20/542 (3%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
AA T+E+ D +A+IT+ P +N L ++ + ++ A+ ++
Sbjct: 3 AATAFTLEIRPDNIAVITIDAPGEKMNTLKAEFGGEVRTIIRQLRENKALRGAVFISAKP 62
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DIN+ + A + + + +++ I P++AA+ G GGGLELA+
Sbjct: 63 DNFIAGADINMIARCTSAAEAEALARQG-QQIMSEIHALSIPVIAAIHGACFGGGLELAL 121
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
CH R+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K
Sbjct: 122 ACHGRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALK 181
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 234
GL+D VV LL+ A+++A + +P R++ +++ + R++L +A+
Sbjct: 182 AGLVDDVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGPLGRQLLFRMVAKKTR 237
Query: 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294
+KT N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 238 QKTQGNYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK 297
Query: 295 VPNVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTI 351
D G + P + +AV+GGGLMG GIA + V +K++ ++ + ++
Sbjct: 298 -----DRGAEADPAPLNSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQAKGINHALRYS 352
Query: 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 411
+ V R L + + L ++ G DY F D+VIEAV E + LKQ++ E+E+
Sbjct: 353 WELLDKQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVFEDLALKQRMVGEIEQ 412
Query: 412 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 471
C P I A+NTS++ + + + + +++IG HFFSP MPL+E++ T Q I
Sbjct: 413 CCGPQTIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLVEVIPHATTDEQTIAT 472
Query: 472 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
++ + K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP
Sbjct: 473 VVKLAKLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVEHIDNALVKFGFPVGP 532
Query: 532 FQ 533
Q
Sbjct: 533 IQ 534
>gi|440286759|ref|YP_007339524.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046281|gb|AGB77339.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 716
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ V D VAIIT+ P +N L ++ ++ ++ +V+ + F
Sbjct: 8 SLTVRPDNVAIITIDVPDEKMNTLKAEFGTQVRAILKQIRDNKALQGVVIISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ L P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGHCASAQEAEGLARQGQQIMAEL-NGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + PKT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + + + K+GL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRARQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLA-RLQAKKTAP 239
VV LL+ A+++A + R L +++ + R +L LA + +KT
Sbjct: 187 DVVPQTILLEA----AVELAKQAPSRSRHLPVKERILAGPLGRNILFTLAGKKTEQKTHG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F ELVM S+ L H+FFA K P +
Sbjct: 243 NYPATKKILEVIETGLAQGTSSGYDAEARAFGELVMTSQSKALRHIFFASTEIKKDPGAS 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
R V + G + + + V +K++N++ + +K + V
Sbjct: 303 VEAGPLRAVGILGGGLMGGGIAFVTATK--GKLPVRIKDINAKGINHALKYSWELLDNKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + ++ ++ L ++ G DY F D+VIEAV E + LKQK+ SE+E+ C PH I
Sbjct: 361 RRRHIKANERDSQLALISGSTDYRGFAHRDLVIEAVFEDLALKQKMVSEVEQQCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAQAQRPEQVIGLHFFSPVEKMPLVEVIPHAATSEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKMPIVVADRAGFYVNRILAPYINEAMRMLTDGERIEDIDNALVKFGFPVGPIQ 534
>gi|410628499|ref|ZP_11339218.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410151975|dbj|GAC25987.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 717
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 291/546 (53%), Gaps = 22/546 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
+A T+ +DG+AI+++ P +N L + + D ++ S +K +V ++G
Sbjct: 10 LAPSAFTLTKRDDGIAILSMDVPGETMNTLKVEFGEQIGDMLDQIQSDSAIKGVVVISGK 69
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A + + + V IED P VAA+ G ALGGGLELA
Sbjct: 70 DNSFVAGADISMLAGCKSAEEAEAIGKGG-QAVFQRIEDMTVPFVAAIHGPALGGGLELA 128
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML S+ +++
Sbjct: 129 LACHMRVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGASVRAKQAQ 188
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLA 230
K G++D +V LL+V+ A + RKP + D +G E V K A
Sbjct: 189 KYGIVDDMVPRSILLEVAIEMAKNPKPNRKPV-----KLDAMGQFLERTPVGRKLMFKQA 243
Query: 231 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
R Q + KT N P + +D IE G+ G G EAK F LVM S L +FFA
Sbjct: 244 RKQTEAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVMTPESAALRSLFFAT 303
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K V G+ P+ ++K+ V+GGGLMG GIA + +K++ S+ + +
Sbjct: 304 TEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPARIKDIRSDGIAHAM 361
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
K + V R + + + L L G +DY F + D+VIEAV E + LKQ + ++
Sbjct: 362 KYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVAD 421
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E+ C H I A+NTS+I + + K + +IG H+FSP MPL E++ E TS Q
Sbjct: 422 VEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMPLAEVIAHEATSDQT 481
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGL 527
I + + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG
Sbjct: 482 ISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDKALVKFGF 540
Query: 528 PIGPFQ 533
P+GP +
Sbjct: 541 PVGPIK 546
>gi|312882081|ref|ZP_07741831.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370217|gb|EFP97719.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 707
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 266/478 (55%), Gaps = 13/478 (2%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLEACKSAEEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RI+ KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRISTDSGKTKLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
++DAVV LL+V++ + + K + + + + R+V+ + + +K
Sbjct: 185 IVDAVVPETILLEVAKSFVEKNTGKNKAKQKVSTKEKLIANTGLGRKVIFEQATKKTHEK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA K
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEQGQKKEAQRFGELVMTPESKALRSIFFATTEMKK-- 302
Query: 297 NVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 353
D+G + P + + AV+GGGLMG+GI+ + + V +K+V+++ +L ++
Sbjct: 303 ---DLGSEASPTKIERAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNAMQYNYK 359
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
R +++ + + + L G +D++ FK D+VIEAV E + LKQ + S++E+
Sbjct: 360 LFEKQKKRRIISKAQLQSQMLQLSGGVDFTRFKHTDIVIEAVFEDLELKQTMVSDVEQNA 419
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
P I ATNTS++ + + EK + + ++G H+FSP MPL+E++ E TSA+ + ++
Sbjct: 420 KPTAIFATNTSSLPIKQIAEKAARPENVVGLHYFSPVEKMPLVEVIPHEGTSAETVATVV 479
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV +C GF VNR PY A ++ + +D A+ +FG P+GP
Sbjct: 480 EFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMANEPIESLDKALLNFGFPVGP 537
>gi|168261585|ref|ZP_02683558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|207857806|ref|YP_002244457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|421357402|ref|ZP_15807713.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|421361562|ref|ZP_15811821.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|421367372|ref|ZP_15817566.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|421371287|ref|ZP_15821446.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|421375602|ref|ZP_15825714.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|421379493|ref|ZP_15829562.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|421384525|ref|ZP_15834550.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|421388385|ref|ZP_15838375.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|421392829|ref|ZP_15842778.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|421397633|ref|ZP_15847545.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|421401870|ref|ZP_15851735.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|421407133|ref|ZP_15856942.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|421411417|ref|ZP_15861182.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|421418486|ref|ZP_15868188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|421420001|ref|ZP_15869682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|421424426|ref|ZP_15874068.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|421430437|ref|ZP_15880024.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|421433937|ref|ZP_15883490.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|421439478|ref|ZP_15888968.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|421444251|ref|ZP_15893682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|421447340|ref|ZP_15896742.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|436679304|ref|ZP_20517735.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|436797418|ref|ZP_20523186.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|436808543|ref|ZP_20527967.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|436817281|ref|ZP_20534363.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|436830762|ref|ZP_20535504.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|436849301|ref|ZP_20540470.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|436856896|ref|ZP_20545818.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|436862485|ref|ZP_20549168.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|436872383|ref|ZP_20555405.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|436879939|ref|ZP_20559773.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|436889243|ref|ZP_20565164.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|436897169|ref|ZP_20569816.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|436901004|ref|ZP_20571928.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|436909539|ref|ZP_20576263.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|436917291|ref|ZP_20580825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|436923823|ref|ZP_20585192.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|436933821|ref|ZP_20589976.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|436942205|ref|ZP_20595188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|436948510|ref|ZP_20598723.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|436957147|ref|ZP_20602815.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|436968252|ref|ZP_20607661.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|436976433|ref|ZP_20611831.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|436990772|ref|ZP_20617069.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|437004095|ref|ZP_20621824.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|437014402|ref|ZP_20625480.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|437027005|ref|ZP_20630016.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|437045221|ref|ZP_20637656.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|437048368|ref|ZP_20639407.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|437060806|ref|ZP_20646633.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|437069928|ref|ZP_20651357.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|437075429|ref|ZP_20653883.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|437080444|ref|ZP_20657048.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|437090958|ref|ZP_20662949.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|437102562|ref|ZP_20666590.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|437120016|ref|ZP_20671234.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|437127776|ref|ZP_20674866.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|437135736|ref|ZP_20679382.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|437143480|ref|ZP_20684347.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|437154953|ref|ZP_20691413.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|437160309|ref|ZP_20694560.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|437167757|ref|ZP_20698955.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|437173879|ref|ZP_20701950.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|437182739|ref|ZP_20707238.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|437237647|ref|ZP_20714007.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|437258238|ref|ZP_20716275.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|437266727|ref|ZP_20720811.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|437278694|ref|ZP_20727355.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|437285741|ref|ZP_20729801.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|437313791|ref|ZP_20736959.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|437332145|ref|ZP_20742138.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|437337972|ref|ZP_20743446.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|437405759|ref|ZP_20752256.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|437461188|ref|ZP_20762137.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|437472552|ref|ZP_20765556.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|437493855|ref|ZP_20772229.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|437507726|ref|ZP_20776075.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|437531896|ref|ZP_20780789.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|437553750|ref|ZP_20784111.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|437577094|ref|ZP_20790786.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|437584379|ref|ZP_20792698.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|437600745|ref|ZP_20797281.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|437623273|ref|ZP_20804946.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|437660517|ref|ZP_20812589.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|437735321|ref|ZP_20832409.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|437769386|ref|ZP_20835412.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|437804633|ref|ZP_20838961.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|438088290|ref|ZP_20859746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|438098372|ref|ZP_20862780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|438111711|ref|ZP_20868512.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|445186965|ref|ZP_21399424.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|445232321|ref|ZP_21406026.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|445330622|ref|ZP_21413902.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|445347864|ref|ZP_21419449.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|445368617|ref|ZP_21425793.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
gi|254788648|sp|B5R3R9.1|FADJ_SALEP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|205349589|gb|EDZ36220.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709609|emb|CAR33954.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|395988184|gb|EJH97345.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|395991464|gb|EJI00588.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|395992565|gb|EJI01677.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|396003964|gb|EJI12948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|396004517|gb|EJI13499.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|396006792|gb|EJI15754.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|396019513|gb|EJI28369.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|396019729|gb|EJI28580.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|396020296|gb|EJI29141.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|396031696|gb|EJI40422.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|396033080|gb|EJI41795.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|396033397|gb|EJI42104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|396038487|gb|EJI47126.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|396045783|gb|EJI54374.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|396046541|gb|EJI55125.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|396055485|gb|EJI63970.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|396059967|gb|EJI68414.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|396061364|gb|EJI69795.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|396067736|gb|EJI76093.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|396069846|gb|EJI78176.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|396075173|gb|EJI83449.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|434960933|gb|ELL54267.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|434967561|gb|ELL60377.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|434971730|gb|ELL64233.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|434983504|gb|ELL75300.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|434989156|gb|ELL80729.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|434990907|gb|ELL82437.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|434998734|gb|ELL89948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|435000302|gb|ELL91450.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|435006243|gb|ELL97144.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|435007185|gb|ELL98040.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435008269|gb|ELL99095.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|435014296|gb|ELM04873.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|435021585|gb|ELM11953.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|435028963|gb|ELM19023.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|435031739|gb|ELM21694.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|435041216|gb|ELM30959.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|435042049|gb|ELM31781.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|435044226|gb|ELM33923.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|435055381|gb|ELM44793.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|435056802|gb|ELM46172.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|435060564|gb|ELM49811.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|435069269|gb|ELM58271.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|435071854|gb|ELM60791.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|435072837|gb|ELM61742.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|435080449|gb|ELM69130.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|435084930|gb|ELM73485.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|435086151|gb|ELM74696.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|435090086|gb|ELM78490.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|435091844|gb|ELM80218.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|435098801|gb|ELM87030.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|435106236|gb|ELM94255.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|435113107|gb|ELN00956.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|435113274|gb|ELN01122.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|435122653|gb|ELN10166.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|435128615|gb|ELN15952.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|435129359|gb|ELN16655.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|435137525|gb|ELN24565.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|435138959|gb|ELN25974.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|435140334|gb|ELN27297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|435147597|gb|ELN34359.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|435150735|gb|ELN37399.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|435158111|gb|ELN44522.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|435164278|gb|ELN50375.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|435166567|gb|ELN52540.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|435171798|gb|ELN57354.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|435176580|gb|ELN61947.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|435182022|gb|ELN67056.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|435184965|gb|ELN69867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|435187136|gb|ELN71939.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435188546|gb|ELN73255.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|435196468|gb|ELN80800.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|435205218|gb|ELN88835.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|435220246|gb|ELO02543.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|435225853|gb|ELO07451.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|435227710|gb|ELO09170.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|435233706|gb|ELO14679.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|435243161|gb|ELO23445.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|435243258|gb|ELO23532.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|435244540|gb|ELO24759.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|435255149|gb|ELO34520.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|435261870|gb|ELO41014.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|435263059|gb|ELO42136.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|435269084|gb|ELO47637.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|435286056|gb|ELO63391.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|435302436|gb|ELO78394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|435306660|gb|ELO81928.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435317648|gb|ELO90678.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|435326581|gb|ELO98393.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|435330947|gb|ELP02188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|444862539|gb|ELX87390.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|444869231|gb|ELX93825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|444876609|gb|ELY00774.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|444877973|gb|ELY02104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|444882215|gb|ELY06206.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|445170469|ref|ZP_21395717.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|444862382|gb|ELX87238.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 277/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTACKVG-LPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|395839843|ref|XP_003792785.1| PREDICTED: peroxisomal bifunctional enzyme [Otolemur garnettii]
Length = 723
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 287/532 (53%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ G+K+ ++A S VKAIV+ G G+FS G DI FQ
Sbjct: 8 HNYLALIRLRNPPVNAISAAVLQGIKEGLQKAKSDQTVKAIVICGTEGKFSAGADIRSFQ 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++L P +V+ ++ +KP+VAA++GLALGGGLELA+GCH RIA + L
Sbjct: 68 TPRTFG-IALGP------IVDDMQRNEKPVVAAIQGLALGGGLELALGCHYRIAHAEAYL 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
PE+TLG++PG GTQ LPRL+G+ A+++++ + I + E KLGL+D VV S EE
Sbjct: 121 AFPEVTLGILPGARGTQLLPRLIGVPAALDLIVSGRFILAGEALKLGLLDKVVNSDPVEE 180
Query: 189 LLK-VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
+K V + + +RR KP I+ + D + SEA LQ +K P
Sbjct: 181 AIKFVQTVLDQPLESRRLYNKP-IQIVPYMDTI--FSEAF-------LQVQKKYPGQLAP 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL- 303
+AC+ ++ + + G+ KE ++F L +R L + FFA+R K +
Sbjct: 231 EACVRAVQAAVQYPYEEGIKKEQELFMYLQQSGQARALQYAFFAEREACKWSTPSGASWT 290
Query: 304 --KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R + V V+G G MG GI + I V+ E + L K I + + +
Sbjct: 291 TASARPISSVGVVGLGTMGRGIVISFAKAKIPVIAVESDKNQLETANKIITSTLEKEAS- 349
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
K+ Q + + + E VD+V+EAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGYSWSGPKPRLTTSMKELGGVDLVVEAVFEEMNLKKRVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T+ +IG HFFSPAHVM LLE++ + +S I +M + K I+K
Sbjct: 409 NTSALDIDEIASSTNRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMELSKKIQK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNC GF NR PY L+ G ID + FG +GPF+
Sbjct: 469 FGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEIDQVLEEFGFKMGPFR 520
>gi|226958400|ref|NP_001069248.2| peroxisomal bifunctional enzyme [Bos taurus]
gi|296491297|tpg|DAA33360.1| TPA: peroxisomal bifunctional enzyme [Bos taurus]
Length = 723
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 282/528 (53%), Gaps = 21/528 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNCLALIRLRNPPVNAISTTVARGIKESLQKAITDDTVKAIVICGADGIFCAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH D+ L +V+ I+ KKP+VAA++ LALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKTFDIQLGD------IVDEIQRNKKPVVAAIQKLALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+TLG++PG GTQ LPRLVG+ A+++++ + I++ E KLG+ID +V S+ + +
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 192 VSRLWALDIAAR---RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
++ A R + P R + + SL + A LQ +K P +AC+
Sbjct: 181 -----SIKFAQRISDQSPESRRICNM-PVPSLPNMDAIFSEALLQVRKRYPGWLSPEACV 234
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 305
++ + + G KE ++ L ++ L +VFFA+R +K + K
Sbjct: 235 QAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYVFFAERMANKWSTPSGASWKTALG 294
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 295 RPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KMQ 352
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
Q + + E VD+VIEAV E + LK+ +F+EL C P +L TNTS
Sbjct: 353 QSGHPWSGPKPRLTTSMKELSGVDLVIEAVYEDMNLKKHVFAELSAVCKPEALLCTNTSA 412
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + + +IG HFFSPAHVM LLE++ + +S I +M + K IKK+ VV
Sbjct: 413 LDIDEIASSSDRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTIATVMNLSKKIKKIGVV 472
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNC GF NR Y L+ G ID + FG +GPF+
Sbjct: 473 VGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFR 520
>gi|378954267|ref|YP_005211754.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|438131333|ref|ZP_20873626.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|357204878|gb|AET52924.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|434941548|gb|ELL47977.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|418860581|ref|ZP_13415157.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418865117|ref|ZP_13419632.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392826369|gb|EJA82097.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392829203|gb|EJA84884.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLSVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|395230400|ref|ZP_10408704.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. A1]
gi|424731539|ref|ZP_18160123.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. L17]
gi|394715785|gb|EJF21570.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. A1]
gi|422894190|gb|EKU34005.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. L17]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLDSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFSHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|455644361|gb|EMF23461.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii GTC 09479]
Length = 715
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSAALDMILTGKQLRAKQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|109897985|ref|YP_661240.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas atlantica T6c]
gi|109700266|gb|ABG40186.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 717
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 295/546 (54%), Gaps = 22/546 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
+A T+ +DG+AI+++ P +N L + + D ++ S +K +V ++G
Sbjct: 10 LAPSAFTLTKRDDGIAILSMDVPGETMNTLKVEFGEQVGDMLDQIQSDSAIKGVVVISGK 69
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A + + + V IED P VAA+ G ALGGGLELA
Sbjct: 70 DNSFVAGADISMLAGCKSAEEAEAIGKGG-QAVFQRIEDMAVPFVAAIHGPALGGGLELA 128
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML S+ +++
Sbjct: 129 LACHMRVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGASVRAKQAK 188
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLA 230
K G++D +V LL+V A+++A + KP R + D +G E + + K A
Sbjct: 189 KYGIVDDMVPRSILLEV----AIEMAKKPKPN-RKPVKLDAMGQFLERTPMGRKLMFKQA 243
Query: 231 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
R Q + KT N P + +D IE G+ G G EAK F LVM S L +FFA
Sbjct: 244 RKQTQAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVMTSESAALRSLFFAT 303
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K V G+ P+ ++K+ V+GGGLMG GIA + +K++ S+ + +
Sbjct: 304 TEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPARIKDIRSDGIAHAM 361
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
K + V R + + + L L G +DY F + D+VIEAV E + LKQ + ++
Sbjct: 362 KYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVAD 421
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E+ C H I A+NTS+I + + K + +IG H+FSP MPL E++ E TS Q
Sbjct: 422 VEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMPLAEVIAHEATSDQT 481
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGL 527
I + + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG
Sbjct: 482 ISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDKALVKFGF 540
Query: 528 PIGPFQ 533
P+GP +
Sbjct: 541 PVGPIK 546
>gi|237732366|ref|ZP_04562847.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
gi|226907905|gb|EEH93823.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 280/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA++T+ P +N L + ++ + ++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKHIRDNKALRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +++ I P++AA+ G LGGGLE+A+
Sbjct: 64 NFIAGADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALA 122
Query: 120 CHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K+
Sbjct: 123 CHNRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKV 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + R+L +++ G L A ++ A+
Sbjct: 183 GLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGPLGRALLFRMASKKTAQ 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
V R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C P
Sbjct: 357 ETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAP 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + +
Sbjct: 417 HTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|398829899|ref|ZP_10588093.1| 3-hydroxyacyl-CoA dehydrogenase [Phyllobacterium sp. YR531]
gi|398215608|gb|EJN02169.1| 3-hydroxyacyl-CoA dehydrogenase [Phyllobacterium sp. YR531]
Length = 649
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 274/528 (51%), Gaps = 31/528 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +AII + NPPVNA++ + L E + ++A ++ G F G D+ F
Sbjct: 8 EDNIAIIWIDNPPVNAMSHSVRERLSLALNEVNADTGIEASIIACRGKTFVAGADVKEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P + +V LIED KP++AA+ G ALGGG E+A+ H RIAAP Q
Sbjct: 67 -----GKPPLAP--FLNDLVQLIEDSAKPVIAAIHGKALGGGFEIALAAHGRIAAPDAQF 119
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+ LG+IPG GGTQRLPRL+G++ AI+M+ KSI++ LGLID +V+ EL+
Sbjct: 120 GLPEVKLGIIPGAGGTQRLPRLIGVAAAIDMIATGKSISAPHARNLGLID-IVSQNELIA 178
Query: 192 VSRLWALDIAARRKPWIRSL-HRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
D A + I S RT +L E L++ ++ K P A +
Sbjct: 179 -------DALAFARTLIHSEPRRTGQLPIAKFDEQTAELQILAVEQKARGQISPGEAARM 231
Query: 249 DVIEEGIVHGGY----SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
++ G G+ E F ELV + + L HVF A+R +K + DI
Sbjct: 232 ------VLRGANVPIEQGLKLERDKFLELVGSEQAVALRHVFVAERLAAKFDELADI--L 283
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR ++ V + G GLMG+GIA + V + E ++ + +G K ++A V G++
Sbjct: 284 PRPIQSVGIAGAGLMGAGIAVTFADADYDVTVVERDTLSIDEGQKRVDAIYERAVKSGRI 343
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ L + D + F D+VIEAV + + +K+++F+ L P ILATNTS
Sbjct: 344 SNAIKEERLTRISFHSDLNAFTKCDLVIEAVFDDLGVKRELFTCLASIVRPDTILATNTS 403
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
+D + + R IG HFFSPA++M L+E+V+T+ + V+ + V K + K+ +
Sbjct: 404 YLDPDAIASVVPDPSRFIGLHFFSPANMMRLVEVVKTKEIAPDVLATGLAVAKRLGKLGI 463
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
V G C GF NR F Y + ++ G ID+A+ ++G P+GP+
Sbjct: 464 VSGVCEGFIGNRLFTAYREQCDFMLEDGALPHEIDNAVEAYGFPMGPY 511
>gi|403270077|ref|XP_003927023.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Saimiri
boliviensis boliviensis]
Length = 723
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 286/530 (53%), Gaps = 25/530 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I NPPVNA+++ ++ +++ ++A + +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRFRNPPVNAISMALLREIEEGLQKAVTDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +S+ VV+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + Q+
Sbjct: 68 APRTLG-------LSLGSVVDEIQRNVKPVVAAIQGMALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VV S+ L +
Sbjct: 121 GLPEVTLGLVPGARGTQLLPRLIGVPAALDLITTGRYILAGEALKLGILDKVVNSDPLEE 180
Query: 192 VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
R A+R +P + SL + A L+ +K P +AC+
Sbjct: 181 AIRF------AQRVSDQPLESRRLFNKPIPSLPNMDTIFSEALLKMRKQHPGCLAQEACV 234
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---P 305
++ + + G KE ++F+ L+ +R L + F A+R +K + + K
Sbjct: 235 RAVQAAVQYPYEVGSKKEEELFQYLLQSGQARALQYAFLAERKANKWSSPSGASWKTASA 294
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ + V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 295 QPISSVGVVGLGTMGRGIVISFARAGIPVIAVDSDKNQLATANKIITSVLEKEASK---- 350
Query: 366 QDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
++ +A K L S E VD+VIEAV E + LK+++F+EL C P L TNT
Sbjct: 351 MQQSGHAWSGPKPRLTSSMKELGGVDLVIEAVFEDMSLKKQVFAELSAVCKPEAFLCTNT 410
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S +D++ + TS +IG HFFSPAH+M LLE++ + +S I +M + K IKK+
Sbjct: 411 SALDVDELASSTSRPHLVIGTHFFSPAHIMKLLEVIPSRYSSPTTIATVMNLSKKIKKIG 470
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 471 VVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>gi|440899525|gb|ELR50818.1| Peroxisomal bifunctional enzyme [Bos grunniens mutus]
Length = 723
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 282/528 (53%), Gaps = 21/528 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNCLALIRLRNPPVNAISTTVARGIKESLQKAITDDTVKAIVICGADGIFCAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH D+ L +V+ I+ KKP+VAA++ LALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKTFDIQLGD------IVDEIQRNKKPVVAAIQKLALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+TLG++PG GTQ LPRLVG+ A+++++ + I++ E KLG+ID +V S+ + +
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 192 VSRLWALDIAAR---RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
++ A R + P R + + SL + A LQ +K P +AC+
Sbjct: 181 -----SIKFAQRISDQSPESRRICNM-PVPSLPNMDAIFSEALLQVRKRYPGWLSPEACV 234
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 305
++ + + G KE ++ L ++ L +VFFA+R +K + K
Sbjct: 235 QAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYVFFAERMANKWSTPSGASWKTALG 294
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 295 RPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KMQ 352
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
Q + + E VD+V+EAV E + LK+ +F+EL C P +L TNTS
Sbjct: 353 QSGRPWSGPKPRLTTSMKELSGVDLVVEAVYEDMNLKKHVFAELSAVCKPEALLCTNTSA 412
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+D++ + + +IG HFFSPAHVM LLE++ + +S I +M + K IKK+ VV
Sbjct: 413 LDIDEIASSSDRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTIATVMNLSKKIKKIGVV 472
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VGNC GF NR Y L+ G ID + FG +GPF+
Sbjct: 473 VGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFR 520
>gi|383814481|ref|ZP_09969901.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia sp. M24T3]
gi|383296558|gb|EIC84872.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia sp. M24T3]
Length = 721
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 284/537 (52%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ D + IIT+ P VN L + A ++K ++ +G F
Sbjct: 22 TLYFTADDIGIITIDVPDEKVNTLKAEFAEQIHGILHTAQQHANLKGLIFVSGKKDSFIA 81
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A + + +++ I K P+VAA+ G LGGGLELA+ CH+R
Sbjct: 82 GADISMIARCQQASEAEALAKKGQQVMAQ-IASFKLPVVAAIHGACLGGGLELALACHSR 140
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I + KTQLGLPE+ LG++PG GGTQRLPRL+G +KA+++ML +S+ +++ ++GL+D
Sbjct: 141 ICSLDDKTQLGLPEVQLGLLPGSGGTQRLPRLIGAAKALDLMLTGRSLRAKQARRMGLVD 200
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAK-KTAP 239
VV LL+ A++ + R L D + R VL L R Q + K+
Sbjct: 201 DVVPQSILLQT----AVERVRKGHQAERGLSYKDSIMQGPLGRAVLFHLVRKQTRAKSKG 256
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+ P + +DV+ G+ G +G EAK F ELVM S L +FFA A K
Sbjct: 257 HYPATEKIIDVVHIGLTQGSGNGYAAEAKAFGELVMTPESAALRSIFFATTALKK----- 311
Query: 300 DIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVR 356
D G + P + KVAV+GGGLMG GIA I + V +K++N + + +K ++
Sbjct: 312 DFGAEAEPLTINKVAVLGGGLMGGGIAGVTITKAGLPVRIKDINQQGISHSLKYSWDLLQ 371
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
RG L + + + +L G DYS F D+VIEAV E + LKQ++ E+E+ H
Sbjct: 372 KKARRGYLKRAELQRQMMLLSGTTDYSGFNQTDLVIEAVFEDLELKQRMIREVEENAAQH 431
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ ++ + + +++IG H+FSP MPL+EI+ +TSAQ I +
Sbjct: 432 TIFASNTSSLPIHEIASTAARPEQVIGLHYFSPVDKMPLVEIIPHAKTSAQTIATTVAFA 491
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K +VVG+ GF VNR PY A + G + ID ++ FG P+GP Q
Sbjct: 492 RKQGKTAIVVGDSAGFYVNRILAPYINEATRCLIEGETIEHIDKSLMDFGFPVGPLQ 548
>gi|397164597|ref|ZP_10488052.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
gi|396093745|gb|EJI91300.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 273/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T V D +A++T+ N +N L ++ ++ ++ +V ++ F
Sbjct: 8 TFNVRPDNIAVVTIDVPNEKMNTLKAEFAGEVRAMLKQIRDNKALRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P+VAA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCQTAKEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K+GL+D
Sbjct: 127 ICTDDAKTMLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+D+A + +P R L +++ G L A +++ +KT
Sbjct: 187 DVVPQSILLEA----AVDLAKQGRPVARHLPVRERVLAGPLGRALLFRMVSKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P L VIE G+ G SG EA+ F +L M S+ L H+FFA K P +
Sbjct: 243 NYPAATRILSVIETGLTQGRSSGYDAEARAFGQLAMTPQSQALRHLFFASTGVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++ P V G G TA + V +K++N++ + +K + V
Sbjct: 302 EVQAGPLNTIGVLGGGLMGGGIAFVTAS-KAGLPVRIKDINAKGINHALKYSWEELDKKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L + G LD+S F D+VIEAV E + LKQK+ +E+E C H I
Sbjct: 361 RRRYLKAGERDKQLAKISGTLDFSGFAQRDLVIEAVFEDLALKQKMVAEVEAHCSAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + ++IIG HFFSP MPL+E++ T Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEKIIGLHFFSPVEKMPLVEVIPHAGTDEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+S G + ID A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAIRLLSEGECIEDIDRALVKFGFPVGPIQ 534
>gi|334124992|ref|ZP_08498986.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
gi|333387562|gb|EGK58756.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 277/527 (52%), Gaps = 12/527 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + + +V ++G F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAICGLVFISGKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARATSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
LL+ + AL ++P + G L A ++ + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPL--PVRERILAGPLGRALLFNRVGKKTGQKTKGNYPATTRI 250
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +P
Sbjct: 251 LEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPGSE---AEPAP 307
Query: 308 VRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
+R V V+GGGLMG GIA + V +K++N + + ++ N+ V R +
Sbjct: 308 LRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRHIKA 367
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS++
Sbjct: 368 SERDKTLAMITGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSSL 427
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
+ + K + +++IG H+FSP MPL+E++ TS Q I ++ + K K P+VV
Sbjct: 428 PIGDIAAKAARPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTPIVV 487
Query: 487 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 488 ADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|205353501|ref|YP_002227302.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|375124344|ref|ZP_09769508.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. SG9]
gi|445134084|ref|ZP_21382767.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
gi|254788647|sp|B5RCL3.1|FADJ_SALG2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|205273282|emb|CAR38247.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628594|gb|EGE34937.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. SG9]
gi|444847013|gb|ELX72164.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINKAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|168242516|ref|ZP_02667448.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168817872|ref|ZP_02829872.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194451326|ref|YP_002046443.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|197248926|ref|YP_002147346.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197263338|ref|ZP_03163412.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200388801|ref|ZP_03215413.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|386592196|ref|YP_006088596.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409250994|ref|YP_006886800.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|419728519|ref|ZP_14255484.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|419733334|ref|ZP_14260233.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|419738390|ref|ZP_14265154.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|419746414|ref|ZP_14273002.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|421568674|ref|ZP_16014389.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|421574939|ref|ZP_16020554.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|421577999|ref|ZP_16023581.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|421583585|ref|ZP_16029104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|440761527|ref|ZP_20940601.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|440767079|ref|ZP_20946065.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|440773781|ref|ZP_20952672.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|254788646|sp|B4TCA8.1|FADJ_SALHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788650|sp|B5EZR9.1|FADJ_SALA4 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194409630|gb|ACF69849.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|197212629|gb|ACH50026.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197241593|gb|EDY24213.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199605899|gb|EDZ04444.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205338643|gb|EDZ25407.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205344950|gb|EDZ31714.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320086822|emb|CBY96594.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|381299573|gb|EIC40645.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|381300468|gb|EIC41529.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|381302612|gb|EIC43648.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|381302893|gb|EIC43923.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|383799240|gb|AFH46322.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402523465|gb|EJW30782.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|402525576|gb|EJW32863.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|402529751|gb|EJW36982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|402531909|gb|EJW39111.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|436414756|gb|ELP12682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|436421578|gb|ELP19423.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|436424749|gb|ELP22514.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|254486938|ref|ZP_05100143.1| peroxisomal bifunctional enzyme [Roseobacter sp. GAI101]
gi|214043807|gb|EEB84445.1| peroxisomal bifunctional enzyme [Roseobacter sp. GAI101]
Length = 698
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 287/537 (53%), Gaps = 48/537 (8%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVNAL+ + GL E A + VKA+++ G G F G DI F K
Sbjct: 13 IAVLRLQNPPVNALSHAVRLGLVAGIERAEADTGVKAVLIVGEGRSFIAGADITEFGKTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV IE +VA++ G++LGGGLE+A+ H R+A P +GLP
Sbjct: 73 LE---PYLPDV-----CKRIEASPLLVVASMHGVSLGGGLEIALSAHYRVAQPSAIVGLP 124
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG+IPG G TQRLPRL+G+ A++++ + + + E LG+ID V + +V
Sbjct: 125 EVHLGLIPGAGATQRLPRLIGVDAALDLITSGRQVKAPEALTLGIIDKVAEGDPQ-EVGL 183
Query: 195 LWA---LDIAARRKP-----------WIRSLHRTDKLGSLSEAREVLKLAR-LQAKKTAP 239
+A LD AA R+ W + G+L + R + A ++A + A
Sbjct: 184 AYAQELLDAAAPRRAVSEMAAPAAIDWDAAYD-----GTLKKGRGQISPAHAVRAVQAAS 238
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
+P Q G+ E K+F +L+ D G++H FF++RA +P +
Sbjct: 239 ELPFDQ----------------GMAAERKIFTDLMETDQREGMIHAFFSERAVGNLPELK 282
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G++PR ++ + +IGGG MG+GIATA +L VVL E+ E I N+ G +
Sbjct: 283 --GVQPRALQSIGIIGGGTMGAGIATAALLAGFNVVLIEMKPEAAEAARARIAGNLSGAL 340
Query: 360 TRGKLTQDKANNALKM-LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
RGK+TQ K + + L+ ++Y VD+VIEAV E + +K+ +F +L+ C P I
Sbjct: 341 KRGKITQMKFDAMTTVALEVSVNYESLALVDLVIEAVFEDMDVKKDVFGKLDAVCRPGAI 400
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
LA+NTS +D+N + TS +IG HFFSPAH+M LLE+V ++T+ V+ +GK
Sbjct: 401 LASNTSYLDINEIAASTSRPADVIGLHFFSPAHIMKLLEVVVADKTAPDVVATGFALGKA 460
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
+ K+ V G C GF NR Y +A +V G ++ID A+ FG +GPF G
Sbjct: 461 LGKISVRAGVCDGFIGNRILATYRTAADHMVLDGASPYQIDKALVDFGFAMGPFAVG 517
>gi|16761312|ref|NP_456929.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29140992|ref|NP_804334.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213160943|ref|ZP_03346653.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213611232|ref|ZP_03370058.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650422|ref|ZP_03380475.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213852450|ref|ZP_03381982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|289826758|ref|ZP_06545703.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|378958622|ref|YP_005216108.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|81513527|sp|Q8Z4Z0.1|FADJ_SALTI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|25291855|pir||AB0805 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503611|emb|CAD07620.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136617|gb|AAO68183.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|374352494|gb|AEZ44255.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 715
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|197102182|ref|NP_001126017.1| trifunctional enzyme subunit alpha, mitochondrial [Pongo abelii]
gi|55730051|emb|CAH91750.1| hypothetical protein [Pongo abelii]
Length = 763
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 281/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG +PG GGTQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|410897627|ref|XP_003962300.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Takifugu rubripes]
Length = 764
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 288/554 (51%), Gaps = 30/554 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V EV D VA++ + +P VN L++ + L + E + +DVK A++++
Sbjct: 37 LARTHVDYEVKGD-VAVVRINDPNSKVNTLSVQMQNELTEIMNEIWANNDVKSAVLISKK 95
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q + +++ + ++ IE KPIVAA+ G LGGGLE A
Sbjct: 96 PGCFIAGADINMIQACADSEEITKLSQEGQKMF-EKIEKSPKPIVAAINGSCLGGGLEFA 154
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ C RIA + KT LG PE+ LG++PG GGTQRLP++VGL A +MML ++I +++
Sbjct: 155 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPSAFDMMLTGRNIRADKAK 214
Query: 176 KLGLIDAVVT-------SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL- 227
K+GL++ +V S E ++ L + I R + + + G++ + ++ +
Sbjct: 215 KMGLVNELVDPLGPGLMSPEERTINYLEEVAIECARGIVNKKIPLRKEKGTMQKIQDYIM 274
Query: 228 --KLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELVML 276
+ R Q KT Q+ ++ ++ G+ G +G L E++ F L
Sbjct: 275 SYPVVRNQIYKTVQGKVMKQSKGLYPAPLKIVECVKTGLEQGPTAGYLAESQNFGHLGKT 334
Query: 277 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 336
S L+ ++ Q A K G R V+ +AV+G GLMG+GIA + + +L
Sbjct: 335 PESAALIGLYHGQVACKK----NRFGTPQREVKTLAVLGAGLMGAGIAQVTVDKGVSTIL 390
Query: 337 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 396
K+ L +G + + + + +T + ++ L L+G LDY+ F+ DMVIEAV
Sbjct: 391 KDTTVAGLARGQEQVYKGLNTKTKKKSITSFERDSILSNLRGQLDYNGFEKADMVIEAVF 450
Query: 397 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456
E + +K + E+E PPHCI ATNTS + + + + D+++G H+FSP M LL
Sbjct: 451 EDINIKHAVVKEVEAVIPPHCIFATNTSALPIKDIAAASKRPDKVVGMHYFSPVDKMQLL 510
Query: 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 516
EI+ TE+TS I + VG KV +VVG+ GF R P A ++ GVD
Sbjct: 511 EIISTEQTSKDTIASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGVDPK 570
Query: 517 RIDSAIRSFGLPIG 530
++DS SFG P+G
Sbjct: 571 KLDSLTTSFGFPVG 584
>gi|213586195|ref|ZP_03368021.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
Length = 543
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|45384238|ref|NP_990387.1| trifunctional enzyme subunit alpha, mitochondrial [Gallus gallus]
gi|2737971|gb|AAB94317.1| CFR-associated protein p70 [Gallus gallus]
Length = 770
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 36/556 (6%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
A V+ ++ D VA++ P VN L+ + A + E + + VK A++++
Sbjct: 44 ARTHVSYDIKGD-VAVVRFNTPNSKVNTLSKQLNAEFTEVMNEIWTNEAVKSAVLISSKP 102
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F G DI++ + +V+ + +++ IE KPIVAA+ G LGGGLE+A+
Sbjct: 103 GSFIAGADIDMIAACKTSQEVTQLSQEGQKML-EKIEQSPKPIVAAISGSCLGGGLEVAI 161
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
CH RIA KT LG PE+ LG++PG G TQRLP++VGL A +MML ++I ++ K
Sbjct: 162 ACHYRIATKDRKTILGTPEVLLGLLPGAGATQRLPKMVGLPAAFDMMLTGRNINADRAKK 221
Query: 177 LGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 223
+GL+D +V T E L +V+ +A +A + RS ++ + A
Sbjct: 222 MGLVDQLVDPLGPGVKPPEARTIEYLEEVAIGFARGLANKTVSAKRSKGLVQRITDYAMA 281
Query: 224 REVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELV 274
L R Q KT N Q Q ++V++ G+ G +G L E++ F L
Sbjct: 282 ---LPFVRQQVYKTVENKVQKQTKGLYPAPLKIIEVVKAGLDQGHDTGYLTESQSFGHLA 338
Query: 275 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 334
M + S+ L+ ++ Q K G R V+ +AV+G GLMG+GIA + +
Sbjct: 339 MTNESKALIGLYHGQVRCKK----NKFGTPQREVKTLAVLGAGLMGAGIAQVSVDKGLKT 394
Query: 335 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394
+LK+ + L +G + + + G V + LT + ++ L + LDY F+ DMVIEA
Sbjct: 395 ILKDTTQQGLDRGQQQVFKGLNGKVKKKSLTSFERDSILSNMTAQLDYKGFEKADMVIEA 454
Query: 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 454
V E + +K K+ E+E PPHCI A+NTS + +N + + +++IG H+FSP M
Sbjct: 455 VFEDISIKHKVLKEVEAVIPPHCIFASNTSALPINQIAAVSQRPEKVIGMHYFSPVDKMQ 514
Query: 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 514
LLEI+ T++TS + VG KV +VV + GF R P ++ G+D
Sbjct: 515 LLEIITTDKTSQDTAASAVAVGLKQGKVVIVVKDGPGFYTTRCLGPMLAEVGRVLQEGID 574
Query: 515 VFRIDSAIRSFGLPIG 530
++D+ +FG P+G
Sbjct: 575 PKKVDAISTAFGFPVG 590
>gi|238912333|ref|ZP_04656170.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|330503668|ref|YP_004380537.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
gi|328917954|gb|AEB58785.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Pseudomonas
mendocina NK-01]
Length = 693
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 269/526 (51%), Gaps = 30/526 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN+ + G+ + R +A++LTG G G D+ +++
Sbjct: 18 IAVITLDNPPVNSSTDAVRRGILQALA-SLDRARARAVLLTGAGRNLMAGADL---RELE 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P V+ L E C P++A ++G LGGGLELA+ C AR+A LGLP
Sbjct: 74 NEPTEPTLPQVTAAL-----EACPLPVIALIKGHTLGGGLELALACDARLATATANLGLP 128
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------- 187
E+T+G+IPG GGTQRLPR VGL A+EM++ K I + + +LGL+D ++++
Sbjct: 129 EVTVGIIPGAGGTQRLPRAVGLGTALEMIVSGKPIKAAKALELGLVDHLLSASDEAEQQA 188
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
E L +R + +R R + DK + A++++ AR A
Sbjct: 189 EALAFARQYK---GGKRPLSARPVAAEDKAALRTRAQKLIAAARGLPAAAVAAEVVLAAD 245
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+ I KE F L ++ L ++FFA+RA +P + R
Sbjct: 246 EMSFAQAIG--------KERAAFLALRGSQPAQALRYLFFAERAEPYIPAQP---TEARM 294
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ +VAVIG G MGSGIA + V L E+N++ L G+K IE + V R +L+ D
Sbjct: 295 LERVAVIGAGTMGSGIALCALQAGCTVDLLELNAQALAAGVKRIEDELARDVERQRLSAD 354
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K + L L D D+VIEA+IE + KQ +F +L +LATNTS +D
Sbjct: 355 KRDAILARLTASQDIQTVAKADLVIEAIIEDMAAKQALFQQLAAQVSSDTLLATNTSYLD 414
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + E S +R++G HFFSPAH M LLE+VR T Q + + + +KK +VVG
Sbjct: 415 IDAIAEGISHPERVLGLHFFSPAHRMALLEVVRGRSTGEQALCAALKCAERLKKKAIVVG 474
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
N GF NR + Y + ++ G +ID+A+ +G +GPF+
Sbjct: 475 NAWGFVGNRLYAAYRRQCEFMLEEGASPEQIDAALEQYGFAMGPFK 520
>gi|167549603|ref|ZP_02343362.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205325346|gb|EDZ13185.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLIEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|19424318|ref|NP_598290.1| peroxisomal bifunctional enzyme [Rattus norvegicus]
gi|119120|sp|P07896.2|ECHP_RAT RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|206069|gb|AAA41825.1| peroxisomal enoyl-CoA: hydrotase-3-hydroxyacyl-CoA [Rattus
norvegicus]
gi|59809132|gb|AAH89777.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
gi|149019890|gb|EDL78038.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
Length = 722
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 288/529 (54%), Gaps = 30/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 11 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 68 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 123 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 182
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 183 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 232
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 233 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 292
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 293 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 352 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 410
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 411 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 470
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 471 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFR 519
>gi|407770247|ref|ZP_11117618.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286787|gb|EKF12272.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 658
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 288/532 (54%), Gaps = 22/532 (4%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P V++ ND +AIIT+ +PP+NA + + G+ D ++ D ++A +L G F
Sbjct: 8 PPVSLSTEND-IAIITIDHPPINATSHAVRLGIWDALDQVNRDDAIRAAILICAGSTFIA 66
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ F K ++PD+ ++L E KP++AA+ G ALGGGLE+A+GCH R
Sbjct: 67 GADVTEFGKPPLD---PILPDLILKL-----EQSTKPLIAALHGNALGGGLEVALGCHYR 118
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IA +LGLPE+ LG+IPG GGT RLPRL+ + AI ++ K + + GLID +
Sbjct: 119 IATATAKLGLPEVNLGLIPGAGGTVRLPRLIAVENAITLITGGKPVNATTAHDYGLIDEI 178
Query: 184 VTSEELLKVSRLWALDIAARRK--PWIRSL-HRTDKLGSLSEAREVLKLARLQAKKTAPN 240
+ R+ A+ +A R K P +L R ++A + L +A + K +
Sbjct: 179 ADGD-----LRIAAIALAERIKSDPCPTALIDRAPVNAPDADAWDAL-IAGIGKKARGQD 232
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P A I + + + E + F L D S+ L H+FFA+R+ +K+P +
Sbjct: 233 APVIAA--RTIRTAVTGDARTALGLERENFVRLRDSDQSKALRHIFFAERSVAKLPELA- 289
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
G+ PR + ++ VIGGG+MG+GIATA +L VV+ E + + +GI + ++ G +
Sbjct: 290 -GVAPRPLHEIGVIGGGIMGAGIATAALLAGYAVVMIERDEDACERGIANVRHHLGGSLK 348
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG +TQ + + L L DY+ D D+VIEAV E + +K +F++L C P +LA
Sbjct: 349 RGIITQSRHDQLLGDLVSSTDYAALADCDLVIEAVFEDMAVKHDVFAKLSAHCKPDAVLA 408
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
+NTS +D++ + + +R+IG HFFSPAHVM LLE+VRT + + + + +
Sbjct: 409 SNTSYLDIDAIATACTHPERVIGLHFFSPAHVMKLLEVVRTRLANPASLATALAFARRLG 468
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K+ V G C GF NR Y + ++ G ID A+ +FG P+G F
Sbjct: 469 KIAVPCGVCDGFIGNRIMSAYRKHCEYMLEDGSLPSDIDRAMTNFGFPMGLF 520
>gi|296104019|ref|YP_003614165.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295058478|gb|ADF63216.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P +AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEDLARQGQQVMAE-IHSLPIPAIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPHS 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQARRALPVRERVLAGPLGRALLFSMVGKKTEQKTKGNYPATK 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +D P
Sbjct: 249 RILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPG-SDAEPAP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
V G G TA + V +K++N + + ++ N+ V R +
Sbjct: 308 LKAVGVLGGGLMGGGIAFVTAS-KAKLPVRIKDINPKGINHALQYSWQNLDRKVKRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + + M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS+
Sbjct: 367 ASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K+ K P+V
Sbjct: 427 LPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSPQTVSTVVKLAKMQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A L+ G + +D A+ FG P+GP Q
Sbjct: 487 VADKAGFYVNRILAPYINEAMRLLVEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|197285664|ref|YP_002151536.1| fatty acid oxidation complex subunit alpha [Proteus mirabilis
HI4320]
gi|194683151|emb|CAR43755.1| fatty acid oxidation complex alpha subunit [includes: enoyl-coa
hydratase and 3-hydroxyacyl-coa dehydrogenase] [Proteus
mirabilis HI4320]
Length = 722
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 287/541 (53%), Gaps = 19/541 (3%)
Query: 3 APRVTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGG 59
+P V D V IIT+ ++ VN L V ++ ++A VK +++T G
Sbjct: 14 SPVFQFSVRPDKVGIITINVVDEKVNTLKAAFVEQFQNVLKQAQQHSGVKGLIITSGKPD 73
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI++ + + + +L L E+ P+VAA+ G LGGGLELA+
Sbjct: 74 NFIAGADISMIADCKTKEEATALAKAGQDLFTQL-ENYPLPVVAAINGACLGGGLELALA 132
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI + KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L + I ++ +KL
Sbjct: 133 CHGRICSDNSKTRLGLPEVQLGLLPGSGGTQRLPRLIGVTTALDMILTGRQINAKRAFKL 192
Query: 178 GLIDAVVTSEELLKVSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQ 233
GL+D VV LL V+ W L AA+++ + LG R +L + +
Sbjct: 193 GLVDDVVPQAILLDVAAQWILTAKKAAKKQTIMERFWANTTLG-----RNILFDQAKKRT 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT + P + L VIE G+ +G +EA F EL M S L H+FFA A
Sbjct: 248 LAKTKGHYPAAERILHVIERGLEKDIQTGFKEEANAFGELAMTPVSSALRHLFFASTA-- 305
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP + + ++GGGLMG GIA N+ V +K+++ + + + +
Sbjct: 306 -LKNETGSSAKPDNLHHIGILGGGLMGGGIAFVTATKGNLPVRIKDISDKGIAQALNYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + +L+ + + +L G LDYS F ++++EAV E + LKQK+ +++E
Sbjct: 365 KALSTKVKKKRLSARERQRQMGLLSGTLDYSGFHQTNLIVEAVFEDLALKQKMVADIEAL 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + EK ++IIG H+FSP MPL+E++ E+T A+ I
Sbjct: 425 GEGKIIFASNTSSLPIHKIAEKAQYPEKIIGLHYFSPVEKMPLVEVIPHEKTDAKTIATT 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K KV +VVG+ GF VNR PY A + G + ID A+ FG P+GP
Sbjct: 485 VAFAKKQGKVAIVVGDKPGFYVNRILAPYISEALTCLVEGETIENIDKALVQFGFPVGPI 544
Query: 533 Q 533
Q
Sbjct: 545 Q 545
>gi|418511711|ref|ZP_13077962.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
gi|366084561|gb|EHN48469.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|194442472|ref|YP_002041652.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|418787698|ref|ZP_13343498.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418791598|ref|ZP_13347354.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418799986|ref|ZP_13355650.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418805351|ref|ZP_13360939.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418814079|ref|ZP_13369599.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418814562|ref|ZP_13370076.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418819526|ref|ZP_13374977.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418832306|ref|ZP_13387248.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418838424|ref|ZP_13393268.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418839358|ref|ZP_13394195.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418847102|ref|ZP_13401864.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418852074|ref|ZP_13406779.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|254788645|sp|B4SZR0.1|FADJ_SALNS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194401135|gb|ACF61357.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392762616|gb|EJA19430.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392765223|gb|EJA22011.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392770747|gb|EJA27471.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392772413|gb|EJA29114.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392785052|gb|EJA41633.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392794356|gb|EJA50779.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392794817|gb|EJA51209.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392795937|gb|EJA52287.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392797825|gb|EJA54123.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392808865|gb|EJA64912.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392813069|gb|EJA69044.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392815604|gb|EJA71540.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|365108571|ref|ZP_09336430.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
gi|363640465|gb|EHL79936.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
Length = 715
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 280/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA++T+ P +N L + ++ ++ ++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +++ I P++AA+ G LGGGLE+A+
Sbjct: 64 NFIAGADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALA 122
Query: 120 CHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K+
Sbjct: 123 CHNRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKV 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + R+L +++ G L A ++ +
Sbjct: 183 GLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGPLGRALLFRMASKKTVQ 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+VIE G+ G SG EA F EL M S+ L H+FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGSSSGYDAEASAFGELAMTSQSQALRHIFFANTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
V R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C P
Sbjct: 357 ETKVRRRHIKASERDKQLALISGTIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAP 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ ++ + + +++IG HFFSP MPL+E++ TS Q I + +
Sbjct: 417 HTIFASNTSSLPISDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|161612873|ref|YP_001586838.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|189044423|sp|A9N453.1|FADJ_SALPB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|161362237|gb|ABX66005.1| hypothetical protein SPAB_00579 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 715
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|62180960|ref|YP_217377.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375115294|ref|ZP_09760464.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|75481934|sp|Q57LW6.1|FADJ_SALCH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|62128593|gb|AAX66296.1| paral putative dehydrogenase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715440|gb|EFZ07011.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 715
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|168465897|ref|ZP_02699767.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|418763834|ref|ZP_13319940.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418765604|ref|ZP_13321687.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418770007|ref|ZP_13326032.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418776484|ref|ZP_13332430.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418781692|ref|ZP_13337568.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418785699|ref|ZP_13341526.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418803107|ref|ZP_13358731.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|419789214|ref|ZP_14314896.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419791304|ref|ZP_14316957.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|195631449|gb|EDX50009.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|392615718|gb|EIW98154.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392620524|gb|EIX02891.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392731527|gb|EIZ88754.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392738210|gb|EIZ95356.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392740117|gb|EIZ97243.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392745929|gb|EJA02948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392746195|gb|EJA03213.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392750940|gb|EJA07897.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392775717|gb|EJA32408.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
Length = 715
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|421845948|ref|ZP_16279099.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772717|gb|EKS56312.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 715
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ + D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNLRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|224583123|ref|YP_002636921.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224467650|gb|ACN45480.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 708
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPG-SDAPPGP 300
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 527
>gi|400260680|pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
gi|400260681|pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
gi|400260682|pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
gi|400260683|pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
gi|400260684|pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
gi|400260685|pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
gi|400260688|pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
gi|400260689|pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 288/529 (54%), Gaps = 30/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFR 539
>gi|295982065|pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
gi|295982066|pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 288/529 (54%), Gaps = 30/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 16 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 73 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 128 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 187
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 188 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 238 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 297
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 298 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 356
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 357 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 415
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 416 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 475
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 476 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFR 524
>gi|375002207|ref|ZP_09726547.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353076895|gb|EHB42655.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 715
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|301759735|ref|XP_002915716.1| PREDICTED: peroxisomal bifunctional enzyme-like [Ailuropoda
melanoleuca]
Length = 723
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 290/533 (54%), Gaps = 33/533 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+ +A+I L NPPVNA++ +V G+K+ +A + VKAIV+ G G+FS G DI+ F
Sbjct: 9 NSLALIRLRNPPVNAISAAVVHGIKEGLRKAITDHTVKAIVICGADGKFSAGADIHNF-- 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P + + VV+ I+ +KP VAA++GLALGGGLELA+GCH RIA + Q+G
Sbjct: 67 -----SAPGKPGLVLGHVVDEIQRNEKPTVAAIQGLALGGGLELALGCHYRIAHAEAQIG 121
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 189
PE+TLG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 122 FPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDEIVNSDPVEEA 181
Query: 190 LKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
+K++ R+ + +RR KP I+SL D + SEA L+ +K P +
Sbjct: 182 IKLAERISDQPLESRRLCNKP-IQSLPNMDSI--FSEAF-------LKMRKQHPGCLSQE 231
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK- 304
C+ ++ + + G+ KE ++F L +R L +VFFA+R SK + K
Sbjct: 232 TCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQARALQYVFFAERNVSKWSTPSGASWKT 291
Query: 305 --PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
+ V V+G G MG GI + I V+ E + K ++ E + L+ +
Sbjct: 292 AVAHHISSVGVVGLGTMGRGIVISLAKAKIPVIAVESDK----KQLEVAEKIISSLLEKE 347
Query: 363 KLTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+++ K L S E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 348 ASKMQHSSHPWLGPKPRLTTSMKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPEAFLC 407
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D++ + T +IG HFFSPAHVM LLEI+ + +S I +M + K IK
Sbjct: 408 TNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKLLEIIPGQYSSPTTIATVMNLSKKIK 467
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ VVVGNC GF NR Y L+ G +D + FGL +GPF+
Sbjct: 468 KIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSKPEGVDQVLEEFGLKMGPFR 520
>gi|219128384|ref|XP_002184394.1| peroxisomal bifunctional enzyme [Phaeodactylum tricornutum CCAP
1055/1]
gi|217404195|gb|EEC44143.1| peroxisomal bifunctional enzyme [Phaeodactylum tricornutum CCAP
1055/1]
Length = 767
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 269/521 (51%), Gaps = 56/521 (10%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL---------MPDVSVEL--VVNLIEDC 97
V +++LTG G FS G D+ F + A ++ P + L VV IE C
Sbjct: 58 VTSLILTGGGPNFSAGADLTEFASLIPAAATTVPTPSDVGHHHPHAAPSLIDVVTAIEAC 117
Query: 98 KKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157
+KPIVAA++G+ LGGG ELA+ CHAR+A + +LGLPE+ +GVIPG GGTQRLP+LVGL
Sbjct: 118 RKPIVAAIDGVCLGGGCELALACHARVATARARLGLPEVHVGVIPGAGGTQRLPKLVGLR 177
Query: 158 KAIEMMLLSKSITSEEGWKLGLIDAV---VTSEELLKVSRLWALDIAARRKPWIRSLHRT 214
+A+ M+L ++++ ++GL+DA+ T++ L +R WA P IR
Sbjct: 178 QALPMILQGSTVSAASALRMGLLDAIAPEATADSLRTTARQWA--AYGEVLPTIRRTGDL 235
Query: 215 DKLGSLSEAREVLKLARLQAKKTAPNMPQH--QACLDVIEEG---IVHGGYSGVLKEAKV 269
+ S +EA +L +A L + P + H +A + + I HG
Sbjct: 236 QRPESPAEAHALLHVAEL----SLPPLGSHGMRAAIQALRASGTPIQHG----------- 280
Query: 270 FKELVMLDTSRGLVHVFF----AQRATSKVPNVTDIGLKPRGVRK---------VAVIGG 316
+ R HVFF AQ+ S V N P G+ VAV+G
Sbjct: 281 ---MRRSPQGRARRHVFFATRRAQKVWSPVSNAVPTAGPPHGLWSKDDAQSAVPVAVVGA 337
Query: 317 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376
G MGSGIA + +V L +V++ L KG++ ++ + +V R +L + L
Sbjct: 338 GTMGSGIALVLLQAGFHVTLVDVHAPALAKGMEFLKRTLASMVQRRQLKPTQLTALEAKL 397
Query: 377 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 436
+ + E +V+EAV+E + +KQ IF+ L+K PP +L +NTST+D++ + S
Sbjct: 398 RATSNLQELSQCLLVVEAVVEKLIVKQSIFATLDKVTPPTALLLSNTSTLDIDAMASAVS 457
Query: 437 SQDR--IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 494
S+ R G HFFSPAH M L+EIVR TS L + K I K+ VVVGNC GF
Sbjct: 458 SRRRGLFAGWHFFSPAHRMKLVEIVRGSATSDDTTALLQALTKQIGKIGVVVGNCDGFCG 517
Query: 495 NRAFFPYS-QSARLLVSLGVDVFRIDSAIRS-FGLPIGPFQ 533
NR PYS ++ LL V D AIR +G+ +GPF+
Sbjct: 518 NRMLKPYSAETVLLLTETQTTVAAQDYAIRGVYGMALGPFE 558
>gi|398993280|ref|ZP_10696233.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM21]
gi|398135269|gb|EJM24392.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM21]
Length = 716
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 282/533 (52%), Gaps = 10/533 (1%)
Query: 10 VGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
+G DGVA++T+ P P N + L + E + +++ +V+T F G D+
Sbjct: 9 LGKDGVAVVTIDIPGQPANTITERFRDELAEVVERVAADAEIRGVVITSAKKDFVAGGDL 68
Query: 68 -NVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
+ + + V+ D++ ++ ++ +E KP VAA+ G ALGGGLE+A+ CH R+
Sbjct: 69 KEIVRTLSRELSVADARDMATQMSPLLRRLESSGKPYVAAINGSALGGGLEIALACHHRL 128
Query: 125 A--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
P+ LGLPE TLG++PG GGTQRLPRL+G++ A+ +M+ ++ + G++D
Sbjct: 129 VLDNPRILLGLPEATLGLMPGAGGTQRLPRLIGIASALPLMMKGTLLSPDAALAKGIVDG 188
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR--EVLKLARLQ-AKKTAP 239
V+++E+LL +R W L+ A ++PW + ++ ++A + L Q A+ TA
Sbjct: 189 VLSAEQLLPAARAWILEHADAQQPWDKKGYQVPGGAGFADAELGNLFNLTTTQIARDTAR 248
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N+P A L + G +G+ E+ F +LV+ T+ +V F + +
Sbjct: 249 NLPAPIALLRAVAHGTCVPIDAGLHIESCEFAKLVLDPTACNMVRTLFVNKGELEKLTRR 308
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++P + +V V+G GLMGSGIA + + VVL + ++E G + + V
Sbjct: 309 PKAIEPASITRVGVVGAGLMGSGIAQTAAVAGLQVVLLDASAEQATAGRQRLADEFAKRV 368
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+G++ Q A+ L ++ DYSE + D+V+EAV E V +K +F + + P IL
Sbjct: 369 AKGRMVQASADEILARIQATGDYSELAECDLVVEAVFEDVQVKAAVFMQAQAVMKPGAIL 428
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTST+ + + + D IG HFFSP MPL+E+V ++TS + + +++
Sbjct: 429 ASNTSTLPITDMARDLNRPDGFIGLHFFSPVDRMPLVEVVVGQQTSDTTLAHALDFIRLL 488
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+K P+VV + GF +R Y Q + ++ GV ID+A R G +GP
Sbjct: 489 RKTPIVVKDSRGFFTSRVIAAYLQESLAMLGSGVKPALIDNAARLAGFAMGPL 541
>gi|421886226|ref|ZP_16317403.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Senftenberg
str. SS209]
gi|379984243|emb|CCF89676.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Senftenberg
str. SS209]
Length = 708
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 300
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 480 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 527
>gi|262276352|ref|ZP_06054161.1| fatty oxidation complex alpha subunit FadJ [Grimontia hollisae CIP
101886]
gi|262220160|gb|EEY71476.1| fatty oxidation complex alpha subunit FadJ [Grimontia hollisae CIP
101886]
Length = 706
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 292/537 (54%), Gaps = 24/537 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ GNDGVA +++ P +N L V + E ++ D+K +VL + F
Sbjct: 13 SLRYGNDGVAWLSIDVPGESMNTLQATFVDEVSAILSELENKGDIKGLVLYSAKPDNFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + A D + + +L + IE +VAA+ G LGGGLELA+ CH+R
Sbjct: 73 GADVRMLDACKTAEDAQAIAEQGQQLF-SRIEKLPFHVVAAIHGPCLGGGLELALACHSR 131
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L K + +++ K+G++D
Sbjct: 132 VATDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVAGALDMILTGKQLRAKKAKKMGVVD 191
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
VV LL+V A ++A + KP + + +G + R V+ + A+ +KT
Sbjct: 192 DVVPPSVLLRV----AEELALKGKPKRKGTWQDWAMGGNALGRSVVFEQAAKKTREKTRG 247
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P +A LDVI+ G+ G G+ EAK F ELVM S L +FFA A K T
Sbjct: 248 NYPATEAILDVIKYGLDKGIEKGLALEAKCFGELVMSPESAALRSIFFATTAMKKE---T 304
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
+PR V V V+GGGLMG+GIA NI V +K+V ++ GI +A L
Sbjct: 305 GADAEPRLVTGVTVLGGGLMGAGIANVTATKANIPVRIKDVGND----GILNAKAYSYNL 360
Query: 359 VTRGK----LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ + + +++ + + + G DYS ++VIEAV E + LK ++ +E+E+
Sbjct: 361 LDKKRKRRIISKAEMQKMMDRISGTTDYSGMSRNNVVIEAVFEDLKLKHQMVAEVEENLS 420
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
+ ATNTS++ ++ + + + I+G H+FSP MPL+E++ TS + + ++
Sbjct: 421 EDTLFATNTSSLPIHQIAQGAKRPENIVGLHYFSPVDKMPLVEVIPHADTSEETVATVVK 480
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K P+VV + GF VNR PY A + + G V ID+A+ FG P+GP
Sbjct: 481 LAKKQGKTPIVVADKAGFYVNRILAPYMNEAAMTLLSGESVEHIDNALLDFGFPVGP 537
>gi|90408869|ref|ZP_01217009.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
gi|90310032|gb|EAS38177.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
Length = 722
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 285/543 (52%), Gaps = 22/543 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSG 63
T+ + ++GVA + P +N L + L+ + +++K +V T G F
Sbjct: 4 TLTLTDNGVATLCFDMPDASINKLDSASLVELQTHLKNIKDDNNIKLLVFTSLKPGIFIA 63
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN + + + + +L+++ I P +A + G +GGG ELA+ C R
Sbjct: 64 GADINEIKSISSCEEAFKKAQMG-QLILHQISLLPFPSLAVINGACVGGGCELALACTYR 122
Query: 124 I--AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ A + ++GLPE++LG+IPGFGG RLP+L+GLS A+ ++L +K I +++ ++L LID
Sbjct: 123 LMSGAKQAKIGLPEVSLGIIPGFGGCVRLPKLIGLSNALTLILSAKLINAKKAYRLHLID 182
Query: 182 AVVTSEELLKVSRL---------WALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLA 230
AV +++ +V + +I +R K ++ L +++G R + K A
Sbjct: 183 AVYDAQQKNQVDDFIDNIICGHAFKKNILKKRIQKKNVQGLLDNNRIGQ----RLIFKKA 238
Query: 231 RLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
+ + +KT + P L IE+ + +L+E F + + S+ L+ ++F Q
Sbjct: 239 QQKLLQKTKGHYPAPLLALKTIEKTLHLSIDEALLEEVNAFASIASSEISKNLIQLYFTQ 298
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349
A K V + P+ V ++ V+G G+MG GIA N I V LK+++ L KG +
Sbjct: 299 DALKKESGVNADDISPKDVAQLGVLGAGVMGGGIAWLCSQNGIDVRLKDIDWNALNKGYQ 358
Query: 350 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 409
T + K+T + + + G + Y FK +D VIEAV+E + +K+ + E+
Sbjct: 359 TASGYYAQMQKHRKITPAQIRFKMNKISGAVKYHGFKQIDFVIEAVVEKIEIKKTVLREV 418
Query: 410 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 469
EK P H I+A+NTS++ + + + IG HFF+P + MPL+EI+ E++S + I
Sbjct: 419 EKELPEHAIIASNTSSLSITEMATALDRPENFIGMHFFNPVNRMPLVEIISGEKSSPETI 478
Query: 470 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 529
+ + K + K P+VV +C+GF +NR P A LL+ G V IDS I FGLP+
Sbjct: 479 ACAVKLAKAMHKTPIVVADCSGFLINRILIPMLNEAALLLQEGASVTEIDSIITEFGLPM 538
Query: 530 GPF 532
GPF
Sbjct: 539 GPF 541
>gi|204928988|ref|ZP_03220131.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452123787|ref|YP_007474035.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|204321532|gb|EDZ06731.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451912791|gb|AGF84597.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 715
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTILGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|297172906|gb|ADI23867.1| 3-hydroxyacyl-CoA dehydrogenase [uncultured gamma proteobacterium
HF4000_48J03]
Length = 637
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 255/449 (56%), Gaps = 11/449 (2%)
Query: 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGT 147
++ IED KPIVAAV G G G E+A+ C RIA+ P T+ GLPE+ LG++P GGT
Sbjct: 17 ILQYIEDFSKPIVAAVHGTCYGLGTEIALACKGRIASNHPSTKFGLPEVKLGILPAGGGT 76
Query: 148 QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA---ARR 204
QRLPRL+GLS A++MM+ K+I + + K+GL+D +V +LL + + A +A RR
Sbjct: 77 QRLPRLIGLSNALDMMVTGKNIFAYKARKIGLVDELVNENKLLAAACILAKSLAKKPTRR 136
Query: 205 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGV 263
+ I L+R L + V AR + K T P A +D ++ G G +G
Sbjct: 137 QRKIPILNRFLDHTFLGN-QIVFNQARKRVMKMTQGFYPAPLAIIDSVQTGFKKGMQAGY 195
Query: 264 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 323
L E++ ++L++ D S+ L+ +FF+ A K P IGL + + ++ V+G G MG+GI
Sbjct: 196 LAESENCEKLIIGDVSKELMRIFFSSTAKKKNP----IGLNTKPISRIGVLGAGFMGAGI 251
Query: 324 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383
A I N I V +K+V+ + + + I ++ V + L+ A + + G +++S
Sbjct: 252 AEVSIKNGIDVFIKDVSDATISQSKQMIWKRLQKKVKQKALSPLDAKRIIHRMSGNIEFS 311
Query: 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 443
+ V +VIEAV E++ LK++I +E+E I+A+NTS++ + + + IIG
Sbjct: 312 DLARVGLVIEAVFENIELKKEIIAEVESHTNDDTIIASNTSSLSITEMAVSAKRPENIIG 371
Query: 444 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 503
H+FSP +MPLLEIVRT+ T+ QV +G K ++V + GF VNR PY
Sbjct: 372 MHYFSPVPLMPLLEIVRTKTTADQVAAACYDIGVKQGKTCIIVKDSPGFYVNRILSPYMN 431
Query: 504 SARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
A L+V G DV ID AI++ GLPIGP
Sbjct: 432 EALLMVDEGGDVGSIDRAIKAKGLPIGPL 460
>gi|326389071|ref|ZP_08210653.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326206671|gb|EGD57506.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 683
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 275/534 (51%), Gaps = 52/534 (9%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFE--EATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
G+A + + NPPVN + + AGL F+ EA D V +LTG G F G D F
Sbjct: 12 GIAHVVIDNPPVNVTSEAVRAGLMQAFDTVEAQGADRV---ILTGAGKAFVAGADAREFS 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
A +PDV V IE P+VAA+ G+ALGGGLELA+ CHAR+AAP L
Sbjct: 69 S---APRPPHLPDV-----VARIEAFPVPVVAAINGVALGGGLELALACHARVAAPSASL 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPE+TLGV+PG GGTQRLPRL+GL A+ M+ S+++ E LGL+DAV E+++
Sbjct: 121 GLPEVTLGVVPGAGGTQRLPRLIGLGPALTMIAQGSSVSAGEALSLGLVDAV--DEDVVA 178
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQACLD 249
++ +L D+L GSL A MP A +
Sbjct: 179 AAQ---------------TLPLPDRLPTGSLPAPLGDEAALAAARAGAARRMPGQVAPIR 223
Query: 250 VIE--EGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 306
IE H + G+ E F L D + L HVFFA+RA K
Sbjct: 224 AIELVAAACHLPLNEGLAMERATFLALKTSDQAAALRHVFFAERAAMAQTR------KGE 277
Query: 307 G--VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL----VT 360
G + V+GGG MG+ IA A I V + E ++ GI+ + NV L V+
Sbjct: 278 GAEIASAVVVGGGTMGAAIAYALSSVGIAVAMVETDA----AGIERAQGNVGRLHADAVS 333
Query: 361 RGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
RGK++ + A + + + Y + D+ +EAV E + +K +F+ L+ + P IL
Sbjct: 334 RGKMSAETAARRMAERYTWHVGYGDLPPADIAVEAVFEDLAVKAGVFAALDASLPEMTIL 393
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
ATNTS +D++ + + +R IG HFFSPAHVM LLE++R + TS + M + +
Sbjct: 394 ATNTSYLDVDRLAGTVRAPERFIGLHFFSPAHVMKLLEVIRAQTTSPATLATAMRLAGRL 453
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+PV+ G C GF NR Y Q+ +++ G +++D+A+R FG+ +GP++
Sbjct: 454 GKIPVLAGVCDGFIGNRILTRYRQTCDIMLLEGALPWQVDAAMRGFGMAMGPYE 507
>gi|298714001|emb|CBJ27233.1| enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Ectocarpus siliculosus]
Length = 719
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 269/542 (49%), Gaps = 49/542 (9%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I L PP+N L+ + AG+ + + A + V IV+TG FS G DI H
Sbjct: 11 VGVIRLRKPPLNPLSHDVRAGILEGLKLAQDDEAVSLIVITGGDKAFSAGADIKEMASAH 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
V PD+ VV IE C P+VAA+ G+ALGGG E+A+ CH R+A+PK LGLP
Sbjct: 71 A---VRREPDLLT--VVGAIEACTVPVVAAIGGVALGGGCEVALACHLRVASPKASLGLP 125
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV--TSEELLKV 192
E+ +G++PG GGTQRLPRLV A+ M+ K I + + + GL+D VV ++ +L++
Sbjct: 126 EVLIGLLPGAGGTQRLPRLVKAEMALSMITTGKMIPAAKALEAGLVDHVVGASAPDLVEA 185
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-----------VLKLARLQAKKTAP-- 239
A+ A RR P + G L R VL + A K P
Sbjct: 186 ----AVSFARRRLPQV--------AGGLDALRTGGRLLKDPVPVVLAVCDAAAAKIGPPV 233
Query: 240 -NMPQHQACLDVIEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+C++ + G +G+ +E +F L+ SR H+F A+RA ++P
Sbjct: 234 RGAEPRWSCVEALRAAAAGDGLATGMAREGALFSTLIQSQQSRARRHLFLAERAAFRIPR 293
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 357
P V+ V VIG G MG+GIA A + V L + E L KG+ ++ V
Sbjct: 294 TP---AAPPKVQSVGVIGAGTMGAGIAIAFLFAGFKVTLVDAKQENLDKGLAYLQRGVLS 350
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC---- 413
RGK+++ A +L L KD DM AV E++ LK++ C
Sbjct: 351 AARRGKISKKTAEATKALLNPALSIDATKDCDMT--AVFENMGLKKRTLRSSSTRCVSHP 408
Query: 414 PPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 471
P C +NTST+D+ + G T ++G HFFSPAH+MPL+E VR S I
Sbjct: 409 PSSC---SNTSTLDIAPDCKGNHTEPSS-VMGMHFFSPAHMMPLVECVRGADASPLTIAV 464
Query: 472 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+M K +KKV V+VGNC GF NR Y+ ++ G +D A+++FG+ +GP
Sbjct: 465 VMGATKRLKKVGVLVGNCDGFVGNRMLKWYTAETEFMLEEGASPVEVDRAVKAFGMGMGP 524
Query: 532 FQ 533
+
Sbjct: 525 LE 526
>gi|416566914|ref|ZP_11764041.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 4441 H]
gi|363579264|gb|EHL63055.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 4441 H]
Length = 715
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|350544774|ref|ZP_08914321.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527428|emb|CCD38107.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 609
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 238/446 (53%), Gaps = 15/446 (3%)
Query: 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQR 149
++ +E KP V A+ +A+GGGLELA+G H RIAAP Q+ LPE+ L ++PG GGTQR
Sbjct: 1 MIKAVEGSAKPAVVAIHAVAMGGGLELALGAHYRIAAPGAQIALPEVKLDLLPGAGGTQR 60
Query: 150 LPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209
LPR VGL A+ M++ + SE+ + L D + ++ LL + +A A R P+ +
Sbjct: 61 LPRAVGLETALNMIVSGTPVPSEKLAQTALFDEIAEAD-LLAAAICFAGQAADRGGPYPK 119
Query: 210 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 269
D+ A ++ AR A + P C+D IE+G+ G G+
Sbjct: 120 V---RDRKIEHPNAEGFIQFARNSVAAVAQHFPAPHECIDAIEKGVKEGFERGLA----- 171
Query: 270 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 329
LV SR L H FF +RA K+ +V R + + V+G G MG GIA +
Sbjct: 172 ---LVQTPESRALRHTFFGERAADKIADVPP-DTPVRKIGHIGVVGAGTMGGGIAMNFLN 227
Query: 330 NNIYVVLKEVNSEYLLKGIKTIEANVR--GLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387
+ VVL E + L +G+ TI N V +GKLTQ+K + ++ L Y++
Sbjct: 228 AGLPVVLLETKQDALDRGLATIRRNYEDEAQVKKGKLTQEKVEERMALIHPTLSYADLAQ 287
Query: 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF 447
D+++EAV E + +K+++F +L++ P ILA+NTST+DLN + T +IG HFF
Sbjct: 288 ADLIVEAVFEELGVKEQVFRQLDEIAKPGAILASNTSTLDLNKIASFTKLPGDVIGMHFF 347
Query: 448 SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARL 507
SP +VM LLE VR E T+ V+ ++ + K I K VV C GF NR Y + A
Sbjct: 348 SPTNVMKLLEAVRGEETAKNVLATVIQLAKKIGKTAVVADVCDGFIGNRMIEQYIRQALF 407
Query: 508 LVSLGVDVFRIDSAIRSFGLPIGPFQ 533
++ G +ID AI FG +GPF+
Sbjct: 408 MLEEGALPAQIDRAIEQFGFAMGPFR 433
>gi|168237415|ref|ZP_02662473.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194735469|ref|YP_002115457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|416421347|ref|ZP_11689460.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|416434613|ref|ZP_11697737.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|416437936|ref|ZP_11699145.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|416442834|ref|ZP_11702595.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|416450050|ref|ZP_11707194.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|416456203|ref|ZP_11711267.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|416470503|ref|ZP_11718941.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|416478657|ref|ZP_11721775.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|416485012|ref|ZP_11724534.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|416496836|ref|ZP_11729339.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|416506846|ref|ZP_11734988.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB31]
gi|416514141|ref|ZP_11738216.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. ATCC BAA710]
gi|416527479|ref|ZP_11743302.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. LQC 10]
gi|416533015|ref|ZP_11746024.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB30]
gi|416543998|ref|ZP_11752567.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|416554163|ref|ZP_11758114.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 29N]
gi|416557024|ref|ZP_11759206.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 42N]
gi|416575091|ref|ZP_11768183.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|416582686|ref|ZP_11772885.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|416590330|ref|ZP_11777725.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|416596931|ref|ZP_11781746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|416603959|ref|ZP_11785820.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|416610902|ref|ZP_11790395.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|416622187|ref|ZP_11796863.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|416630661|ref|ZP_11800910.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|416649232|ref|ZP_11809705.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|416655307|ref|ZP_11812494.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|416665304|ref|ZP_11816629.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|416683162|ref|ZP_11824190.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|416695039|ref|ZP_11827476.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|416703661|ref|ZP_11829757.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|416711639|ref|ZP_11835419.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|416715790|ref|ZP_11838429.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|416722541|ref|ZP_11843473.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|416736914|ref|ZP_11852297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|416754378|ref|ZP_11861318.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|416765490|ref|ZP_11868845.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|416769398|ref|ZP_11871088.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|418483218|ref|ZP_13052228.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 80959-06]
gi|418486358|ref|ZP_13055326.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|418497169|ref|ZP_13063590.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|418501672|ref|ZP_13068051.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|418505212|ref|ZP_13071560.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|418507844|ref|ZP_13074153.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|418526172|ref|ZP_13092151.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
gi|254788615|sp|B4TQC2.1|FADJ_SALSV RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194710971|gb|ACF90192.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197289626|gb|EDY28989.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|322617132|gb|EFY14038.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322617562|gb|EFY14461.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322624809|gb|EFY21638.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322630359|gb|EFY27129.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634539|gb|EFY31272.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322639250|gb|EFY35942.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322640113|gb|EFY36780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645669|gb|EFY42193.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322652031|gb|EFY48394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322656204|gb|EFY52501.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322659356|gb|EFY55603.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665816|gb|EFY61999.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322669946|gb|EFY66087.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322673931|gb|EFY70028.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322678690|gb|EFY74746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322683516|gb|EFY79530.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322687591|gb|EFY83561.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193575|gb|EFZ78780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323198482|gb|EFZ83584.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323213604|gb|EFZ98394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218360|gb|EGA03070.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323219687|gb|EGA04168.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225677|gb|EGA09903.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323232354|gb|EGA16457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323235613|gb|EGA19697.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323241228|gb|EGA25264.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323244970|gb|EGA28972.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323253873|gb|EGA37698.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323262801|gb|EGA46352.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323264176|gb|EGA47683.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270874|gb|EGA54312.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|363554389|gb|EHL38625.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB31]
gi|363555798|gb|EHL40020.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. LQC 10]
gi|363561723|gb|EHL45837.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 29N]
gi|363566562|gb|EHL50577.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. ATCC BAA710]
gi|363568968|gb|EHL52934.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB30]
gi|363578965|gb|EHL62763.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 42N]
gi|366054973|gb|EHN19316.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|366061798|gb|EHN26042.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 80959-06]
gi|366065743|gb|EHN29929.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|366068571|gb|EHN32710.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|366076046|gb|EHN40088.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|366080612|gb|EHN44581.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|366828988|gb|EHN55867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|372206159|gb|EHP19664.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
Length = 715
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|425071936|ref|ZP_18475042.1| fatty oxidation complex, alpha subunit FadJ [Proteus mirabilis
WGLW4]
gi|404598076|gb|EKA98565.1| fatty oxidation complex, alpha subunit FadJ [Proteus mirabilis
WGLW4]
Length = 722
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 288/541 (53%), Gaps = 19/541 (3%)
Query: 3 APRVTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-G 59
+P V D V IIT+ ++ VN L V ++ ++A VK +++T +
Sbjct: 14 SPVFQFSVRPDKVGIITINVVDKKVNTLKAAFVEQFQNVLKQAQQHSGVKGLIITSSKPD 73
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI++ + + + +L L E+ P+VAA+ G+ LGGGLELA+
Sbjct: 74 NFIAGADISMIADCKTKEEATALAKAGQDLFTQL-ENYPLPVVAAINGVCLGGGLELALA 132
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH RI + KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L + I ++ +KL
Sbjct: 133 CHGRICSDNSKTRLGLPEVQLGLLPGSGGTQRLPRLIGVTTALDMILTGRQINAKRAFKL 192
Query: 178 GLIDAVVTSEELLKVSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQ 233
GL+D VV LL V+ W L AA+++ + LG R +L + +
Sbjct: 193 GLVDDVVPQAILLDVAAQWILTAKKAAKKQTIMERFWANTTLG-----RNILFDQAKKRT 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
KT + P + L VIE G+ +G +EA F EL M S L H+FFA A
Sbjct: 248 LAKTKGHYPAAERILHVIERGLEKDIQTGFKEEANAFGELAMTPVSSALRHLFFASTA-- 305
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP + + ++GGGLMG GIA N+ V +K+++ + + + +
Sbjct: 306 -LKNETGSSAKPDKLHHIGILGGGLMGGGIAFVTATKGNLPVRIKDISDKGIAQALNYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + +L+ + + +L G LDYS F ++++EAV E + LKQK+ +++E
Sbjct: 365 KALSTKVKKKRLSARERQRQMGLLSGTLDYSGFHQTNLIVEAVFEDLALKQKMVADIEAL 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + EK ++IIG H+FSP MPL+E++ E+T A+ I
Sbjct: 425 GEGKIIFASNTSSLPIHKIAEKAQYPEKIIGLHYFSPVEKMPLVEVIPHEKTDAKTIATT 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K KV +VVG+ GF VNR PY A + G + ID A+ FG P+GP
Sbjct: 485 VAFAKKQGKVAIVVGDKPGFYVNRILAPYISEALTCLVEGETIENIDKALVQFGFPVGPI 544
Query: 533 Q 533
Q
Sbjct: 545 Q 545
>gi|224587261|gb|ACN58629.1| Trifunctional enzyme subunit alpha, mitochondrial precursor [Salmo
salar]
Length = 758
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 287/553 (51%), Gaps = 30/553 (5%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
A V EV D VA+I + +P VN L++ + + + F E + D V+ A++++
Sbjct: 32 ARTHVNYEVKED-VAVIRMNDPNSKVNTLSVRMQNEMIEVFNEVLANDAVQSAVLISSKP 90
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F G DIN+ Q + A +V+ + ++ IE KPIVAA+ G LGGGLE A+
Sbjct: 91 GCFIAGADINMIQACNTAEEVTKLSQEGQKMF-ERIEKSSKPIVAAINGSCLGGGLEFAI 149
Query: 119 GCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
C R+A + KT LG PE+ LG++PG GGTQRLP++VG+ A +MML ++I +++ K
Sbjct: 150 ACQYRVATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGIPGAFDMMLTGRNIKADKAKK 209
Query: 177 LGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV--- 226
+GL+ +V S E + L + I R + + T K G + + ++
Sbjct: 210 MGLVHQLVDPLGPGLKSPEERTIEYLEEVAIQCARGIVHKKILLTKKKGMMQKVQDYVMG 269
Query: 227 LKLARLQAKKTAPN---------MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 277
++ R Q K P ++ ++ G+ G SG L EA+ F +L M
Sbjct: 270 IQFVRQQIYKNVTGKVMKMSKGLYPAPLKIIESVKSGLEQGPDSGYLAEAQNFGKLAMTS 329
Query: 278 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 337
S L+ ++ Q A K G+ R V+ +A++G GLMG+GIA + I+ VLK
Sbjct: 330 ESNALIGLYHGQVACKK----NRFGVPERPVKNLAILGAGLMGAGIAQVTVDKGIHTVLK 385
Query: 338 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 397
+ E L +G + + + + + +T + ++ L L G LDYS F+ DMVIEAV E
Sbjct: 386 DTTVEGLSRGQQQVYKGLNDKIKKKAITSFERDSTLSSLTGQLDYSGFEKADMVIEAVFE 445
Query: 398 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 457
+ +K ++ E+E PPHCI ATNTS + + + + +++IG H+FSP M LLE
Sbjct: 446 DINIKHRVIKEVEAVIPPHCIFATNTSALPIKDIAAASMRPEKVIGMHYFSPVDKMQLLE 505
Query: 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 517
I+ T++TS + VG KV +VVG+ GF R P A ++ G+ +
Sbjct: 506 IITTDKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGISPKK 565
Query: 518 IDSAIRSFGLPIG 530
+D+ FG P+G
Sbjct: 566 LDALTTGFGFPVG 578
>gi|322831930|ref|YP_004211957.1| fatty acid oxidation complex, subunit alpha FadJ [Rahnella sp.
Y9602]
gi|384257038|ref|YP_005400972.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
gi|321167131|gb|ADW72830.1| fatty acid oxidation complex, alpha subunit FadJ [Rahnella sp.
Y9602]
gi|380753014|gb|AFE57405.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
Length = 733
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 294/537 (54%), Gaps = 36/537 (6%)
Query: 15 VAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ 71
V IIT+ P VN L + ++A ++K +VL +G F G DI +
Sbjct: 31 VGIITIDVPGEKVNTLRAEFAQQICAILQKAQQYPNLKGLVLISGKPDSFIAGADITMIS 90
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKT 129
A + S + + V++ I P+VAA+ G LGGGLELA+ CHAR+ + KT
Sbjct: 91 GCRTAAEASELAQKG-QTVMSQIASFSVPVVAAIHGSCLGGGLELALACHARVCSLDEKT 149
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
QLGLPE+ LG++PG GGTQRLPRL+G KA+E+ML +S+ +++ ++GL+D V L
Sbjct: 150 QLGLPEVQLGLLPGSGGTQRLPRLIGAPKALELMLTGRSVRAKQALRMGLVDDAVPYSIL 209
Query: 190 LKVSRLWALD-IAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAK-KTAPNMP 242
L+ AL+ +A RK PW L SL + R Q + KT N P
Sbjct: 210 LQT----ALERVAKGRKSRPPLPWQARLAGGPLGKSL-----LFHFVRKQTQAKTHGNYP 260
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
+ +DV++ G+ G SG EAK F ELVM S L +FFA A K
Sbjct: 261 ATEKIIDVVKTGLDQGSGSGYQAEAKAFGELVMTPESAALRGLFFASTALKKEKGGD--- 317
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKT----IEANVRG 357
+P VR+ ++GGGLMG GIA + V +K++N E + +K +E VRG
Sbjct: 318 AEPLPVRRAGILGGGLMGGGIANVTATKAGLPVRIKDINHEGIRHALKYSWDLLEKKVRG 377
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
+LT+++ + ++ G DYS F +D+V+EAV E + LKQ + +E+E+ PH
Sbjct: 378 R----RLTRNEQQRQMMLISGTTDYSGFAQIDIVVEAVFEDLLLKQAMVAEIEQNAAPHT 433
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ ++ + E+ +++IG H+FSP MPL+E++ TSAQ I +++ +
Sbjct: 434 IFASNTSSLPIHKIAEQADRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAQTISTTVSLAR 493
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K +VVG+ GF VNR PY +++AR L++ G V ID A+ +FG P+GP Q
Sbjct: 494 KQGKTAIVVGDSAGFYVNRILAPYINEAARCLLA-GEPVDHIDKALVNFGFPVGPIQ 549
>gi|168229765|ref|ZP_02654823.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194472438|ref|ZP_03078422.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194458802|gb|EDX47641.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205335960|gb|EDZ22724.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 715
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 274/528 (51%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + +KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTTQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|254506914|ref|ZP_05119053.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
gi|219550199|gb|EED27185.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
Length = 707
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ +L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FVAGADVRMLDACTTAAEAQALAEKGQQMFQHL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
++DAVV LL V++ + A + K + + + + R+V+ + A+ +K
Sbjct: 185 VVDAVVPETILLDVAKSFVEKNAGKSKGKRKVSTKEKLISNTGLGRKVIFDQAAKKTFEK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA K
Sbjct: 245 TRGNYPAADAILEVIRYGLEKGFEQGQKKEAERFAELVMTSESKALRSIFFATTEMKK-E 303
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
N +D +P V++ AV+GGGLMG+GI+ + + V +K+V+ + +L +K
Sbjct: 304 NGSDA--EPLSVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSEDGVLNALKYNYKLF 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R +++ + + + L G D++ F D+VIEAV E + LKQK+ +++E+
Sbjct: 362 ETQRKRRIISKAQLQSKMLQLSGGTDFTSFNHTDIVIEAVFEDLDLKQKMVADIEENAKD 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ + + EK + ++G H+FSP MPL+E++ E TS + + ++
Sbjct: 422 STIFATNTSSLPIGQIAEKAQRPENVVGLHYFSPVEKMPLVEVIPHEGTSDETVSTVVEF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV +C GF VNR PY A ++ G + +D A+ +FG P+GP
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIGHLDKALLNFGFPVGP 537
>gi|114576524|ref|XP_515339.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
isoform 3 [Pan troglodytes]
gi|397513608|ref|XP_003827103.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Pan
paniscus]
gi|410261914|gb|JAA18923.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
gi|410307860|gb|JAA32530.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
gi|410338747|gb|JAA38320.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
Length = 763
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 281/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLE+A+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG +PG GGTQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|283832235|ref|ZP_06351976.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
gi|291071876|gb|EFE09985.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
Length = 714
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSTQEAETLARQGQQIMAE-IHALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRL+G+S A++M+L K + +++ K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPQSILLEA----AVELAKKDSSTHRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRHIFFANTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D+ P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DVQPGPLNRVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLALISGSTDYRGFAHRDLVIEAVFEDLALKQQMVAEVEQHCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + ++++G HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVVGLHFFSPVEKMPLVEVIPHAATSEQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQ 534
>gi|292492128|ref|YP_003527567.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
gi|291580723|gb|ADE15180.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
Length = 746
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 290/554 (52%), Gaps = 31/554 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+E D AII P PVN L E+ T+ D++A+VL F G
Sbjct: 12 VERREDNAAIIWFDVPDAPVNTLQAGFEQDFNHVLEQLTADKDLEAVVLASAKEDFIAGA 71
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI + ++ + + + + + V+ +E PIVAA+ G+ LGGGLE+A+ C AR+A
Sbjct: 72 DIKMLTQLPDS-EAARQLSHTAQGVMERVESFPLPIVAAIHGVCLGGGLEVALACRARVA 130
Query: 126 AP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ +TQ G PE+ LGVIPG GGTQRLPRLVGL A++M+L K+I + + +GL+D V
Sbjct: 131 SNSRRTQFGQPEVKLGVIPGVGGTQRLPRLVGLETALDMILTGKTIPAPKARAMGLVDEV 190
Query: 184 V------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL----- 232
V + W + + +RS R ++ + L+ L
Sbjct: 191 VPRPVLLEAALARARELAWKELREKKEE-EVRSSRRLGQVLGSLLSLGKLRTLLLEENPA 249
Query: 233 -------QAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 280
QAKK T N+P L+VI GI G +G E + F +L + +R
Sbjct: 250 GRSVLFSQAKKKVLSHTHGNLPAPLQALEVIRTGIEEGLEAGFKAEVEAFGDLAVSTKAR 309
Query: 281 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV 339
L+ +F A+ A K T+ + PR V KV V+G GLMGSG+ + V LK+V
Sbjct: 310 NLMALFLARSALKKDLG-TEAEVTPRAVHKVGVLGAGLMGSGVTYVTAAEAGLPVRLKDV 368
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
+ E L +G++++ V V + ++T + + L +++ +Y+ FK D+VIEAV+E++
Sbjct: 369 SHEVLRQGLRSLWKAVTEQVQKRRMTLGERDRVLALVRPTTEYTGFKRADVVIEAVVENI 428
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
+K ++ E+E P I A+NTS+I ++ + E + + +IG H+FSP +PLLE+V
Sbjct: 429 EVKHQVLREVEAHGGPEMIFASNTSSIPIHKIAEASHHPEAVIGMHYFSPVPKVPLLEVV 488
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+T+ +V+ + +GK K +VV + GF R PY A L++ GV + ID
Sbjct: 489 VTEKTAPEVVATCVALGKRQNKTVIVVRDGAGFYTTRILGPYINEATHLLAEGVSIEDID 548
Query: 520 SAIRSFGLPIGPFQ 533
A+ +FG P+GP +
Sbjct: 549 RALINFGFPVGPIK 562
>gi|16765715|ref|NP_461330.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|378445815|ref|YP_005233447.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451113|ref|YP_005238472.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378700298|ref|YP_005182255.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378984951|ref|YP_005248106.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|379701622|ref|YP_005243350.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. ST4/74]
gi|383497088|ref|YP_005397777.1| fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|422026679|ref|ZP_16373060.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|422031703|ref|ZP_16377859.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|427551965|ref|ZP_18928352.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|427568296|ref|ZP_18933071.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|427588696|ref|ZP_18937867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|427612160|ref|ZP_18942728.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|427635977|ref|ZP_18947625.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|427656704|ref|ZP_18952390.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|427661947|ref|ZP_18957297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|427671909|ref|ZP_18962115.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|427799422|ref|ZP_18967382.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|81522343|sp|Q8ZNA7.1|FADJ_SALTY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|16420932|gb|AAL21289.1| putative dehydrogenase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|261247594|emb|CBG25421.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994491|gb|ACY89376.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158946|emb|CBW18459.1| hypothetical fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913379|dbj|BAJ37353.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|323130721|gb|ADX18151.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. ST4/74]
gi|380463909|gb|AFD59312.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|414017246|gb|EKT00985.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|414018055|gb|EKT01730.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|414019205|gb|EKT02825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|414031709|gb|EKT14753.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|414032901|gb|EKT15885.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|414036147|gb|EKT18989.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|414046228|gb|EKT28574.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|414047105|gb|EKT29402.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|414052063|gb|EKT34137.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|414058930|gb|EKT40561.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|414064415|gb|EKT45356.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
Length = 715
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 274/528 (51%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|297621495|ref|YP_003709632.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|297376796|gb|ADI38626.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|337293681|emb|CCB91668.1| Fatty acid oxidation complex subunit alpha [Waddlia chondrophila
2032/99]
Length = 714
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 286/536 (53%), Gaps = 17/536 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
+G+A + P VN +++ ++ L E +KA+V+T + F G D+
Sbjct: 12 NGIARLAFDYPGEKVNKISLEVLEELDAVLEGIKDNQQIKALVITSAKEKIFIAGADLKS 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
F+++ D++ V N +E+ P +A ++G+ LGGGLELA+ C R+ +
Sbjct: 72 FERLFKNFDLAEGMIKKGHSVYNKLEELPFPSIAVIDGVCLGGGLELALACTYRVVGDSS 131
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE LG+ PG+GGTQRLPRLVGL + ++M+L + + +++ +K+ L DA+ SE
Sbjct: 132 KTTLGLPETNLGIFPGWGGTQRLPRLVGLMEGLKMVLTGRPVDAKKAFKIHLADAIFPSE 191
Query: 188 ELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLA-------RLQAKKTAP 239
+ + + + +I ++ K + ++ L SL R + A R +KT
Sbjct: 192 FMKEKTDAFVEEILTSKGKEKVLERRKSRGLMSLLFERNPIGRAFVFWQSRRSVLQKTKG 251
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV--MLDTSRGLVHVFFAQRATSKVPN 297
P A LD+I+ G+ KE + F + + + L+++FF K P
Sbjct: 252 QYPSPLAALDLIQNTYTMPLKKGLKKEVEAFVKSMSGAFQCAPNLIYIFFNSEQMKKDPG 311
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 357
+ + V+ V V+G G+MGSGIA ++ V +K+VN + + G K+ +
Sbjct: 312 MIGGQATGKEVKSVGVLGAGVMGSGIAWLMSYRDLPVRMKDVNWKAVGSGFKSAWDTYKV 371
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
L+ + KL +AN ++ G +DY+ F +D VIEA +E++ LK KI ELE P
Sbjct: 372 LIKKRKLKPAQANRKFHLISGTIDYTGFDKLDFVIEAAVENLELKHKILKELEANVRPDA 431
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I+ATNTS++ ++ + +R++G HFF+P MPL+EIV E+TS + + + + +
Sbjct: 432 IIATNTSSLTIDELAPALKHPERLVGMHFFNPPARMPLVEIVSGEKTSPEAVQTVFELCQ 491
Query: 478 IIKKVPVVVGNCTGFAVNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+KK PVVVG+C+GF VNR F + + R+L GV R+D FGLP+ PF
Sbjct: 492 RLKKTPVVVGDCSGFLVNRVFAHGFVEIMRMLEE-GVPQERLDKLFLKFGLPMAPF 546
>gi|296224758|ref|XP_002758183.1| PREDICTED: peroxisomal bifunctional enzyme [Callithrix jacchus]
Length = 722
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 291/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I NPPVN +++ ++ +++ ++A + +KAIV+ G G+FS G DI+ F
Sbjct: 7 HNALALIRFRNPPVNVISMALLREMEEGLQKAVTDHTIKAIVICGAEGKFSAGADIHGFS 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +S+ VV+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + ++
Sbjct: 67 APRTFG-------LSLGSVVDEIQRNVKPVVAAIQGMALGGGLELALGCHYRIAHAEARV 119
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I + E KLG++D VV S EE
Sbjct: 120 GLPEVTLGLVPGARGTQLLPRLIGVPAALDLITTGRHILAGEALKLGILDKVVNSDLLEE 179
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + A L+ +K P
Sbjct: 180 AIRFAQRVSDQPLESRRLFKKP-IQSLPNMD---------SIFGEALLKMRKQHPGCLAQ 229
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G KE ++F+ L+ +R L + F A+R +K + + K
Sbjct: 230 EACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQARALQYAFLAERKANKWSSPSGASWK 289
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
+ V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 290 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEASK 349
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEDMSLKKQVFAELSAVCKPEAFLCT 407
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS++D++ + T+ +IG HFFSPAH+M LLE++ ++ +S I +M + K IKK
Sbjct: 408 NTSSLDVDEIASSTNRPHLVIGTHFFSPAHIMKLLEVIPSQYSSPTTIATVMNLSKKIKK 467
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 468 IGVVVGNCFGFVGNRMLNPYYSQTYFLLEEGSKPEEVDRVLEEFGFKMGPFR 519
>gi|365850548|ref|ZP_09391011.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
ATCC 43003]
gi|364567214|gb|EHM44886.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
ATCC 43003]
Length = 716
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 274/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ V D VA+ITL P +N L ++ + D++ +VL + F
Sbjct: 8 SLNVRPDNVAVITLDVPGEKMNTLKAEFGTEVRALLRQIRENHDIRGVVLISAKEDNFVA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P+VAA+ G LGGGLELA+ CHAR
Sbjct: 68 GADINMIGRCKTALEAEALAKQGQQVMAE-IHAMPVPVVAAIHGACLGGGLELALACHAR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + + K GL+D
Sbjct: 127 LCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRARQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
VV + LL+ A++ P R L +++ + R VL + + +KT
Sbjct: 187 EVVAASILLEA----AVERVKNGVPEHRRLPVRERVLAGPLGRTVLFNLVGKKTEQKTLG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P L VIE G+ HG SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATTRILQVIETGLAHGISSGYEAEARAFGELAMTPQSQSLRHIFFASTDLKKDPGAS 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
R V + G + + + V +K++N+ + +K + V
Sbjct: 303 AESGPLRAVGILGGGLMGGGIAFVTACK--GKLPVRIKDINANGINHALKYSWDLLDKKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + ++ L ++ G DYS F D+VIEAV E + LKQK+ +E+E+ C PH +
Sbjct: 361 RRRHIRASERDSQLALISGTTDYSGFSHRDVVIEAVFEDLALKQKMVTEVEQHCAPHTVF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TS + I + + K
Sbjct: 421 ASNTSSLPIGDIAALAARPEQVIGLHFFSPVEKMPLVEVIPHAGTSERTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G + ID A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAIRLLTEGQRIENIDKALVKFGFPVGPIQ 534
>gi|389872958|ref|YP_006380377.1| 3-hydroxyacyl-CoA dehydrogenase [Advenella kashmirensis WT001]
gi|388538207|gb|AFK63395.1| 3-hydroxyacyl-CoA dehydrogenase [Advenella kashmirensis WT001]
Length = 583
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 280/498 (56%), Gaps = 20/498 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+IT NPPVN L + + + + A + V+AIVL G+ FSGG D+ F
Sbjct: 9 KDGIAVITFNNPPVNGLGHGLRKAIVEGVDRANNNSAVRAIVLGGSERAFSGGADVTEF- 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G S P ++ V+ ++E KP+VAA+ G+ LGGGLELA+G H R+AA ++
Sbjct: 68 ---GTPKASQAP--TLRTVIEVLEQSAKPVVAAINGVCLGGGLELALGAHYRVAAAAARV 122
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---E 188
GLPE+ LG++PG GGTQRLPR+VGL KA+ M++ + + + L D VV ++
Sbjct: 123 GLPEVKLGILPGAGGTQRLPRVVGLEKALNMIVSGQVVKAATLADTALFDKVVDADPQAA 182
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 248
++ ++ A D +R IR + ++A +L AR AK + P AC+
Sbjct: 183 AIEFAKGLASDAPLKR---IRD-----LAVADADADALLLNARNAAKAGSARFPAPAACV 234
Query: 249 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 307
+ + G+ E +F +L+ S L HVF A+RA +K+P+V D L+P G
Sbjct: 235 EAVAASTHMAFDDGLACERHLFTQLMASPESLALRHVFAAERAATKIPDVPADTPLRPIG 294
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
+ V VIG G MG GI+ ++ I V+L E E L +G+ TI N + +G++T +
Sbjct: 295 L--VGVIGAGTMGGGISMNYLNAGIPVILLEQKEEALQRGVATIRKNYENTMKKGRITAE 352
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
+ +K+L L Y +VD+VIEAV E + +K+ +F EL++ P ILA+NTST+D
Sbjct: 353 QVEERMKLLSTTLSYDALGEVDLVIEAVFEDMGVKEVVFRELDRVIKPGAILASNTSTLD 412
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487
++ + T +IG HFFSPA+VM LLEIVR +T+ V+ + +GK I K PVV G
Sbjct: 413 VDQIASFTKRPQDVIGLHFFSPANVMKLLEIVRGAKTAKDVLATCIDMGKKIGKKPVVSG 472
Query: 488 NCTGFAVNRAFFPYSQSA 505
C GF NR + Y +A
Sbjct: 473 VCDGFIGNRMLYAYRDAA 490
>gi|418357533|ref|ZP_12960227.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356689314|gb|EHI53858.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 716
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 290/543 (53%), Gaps = 21/543 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++ V DG+ I+T+ P +N L + V ++ E + + + +V++G
Sbjct: 1 MSAKTFSLTVRQDGIGILTMDVPGESMNTLKVAFVDEIRAVLAEVKNNSELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAEDAQTLSREG-QIIFAEIESLAIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL--KL 229
KLGL+D VV LL A+ +A + KP R + D G + E R+VL +
Sbjct: 180 KLGLVDDVVPPSILLDA----AIKLAKQGKP--RHQLKRDLQGKVLETNALGRKVLFDQA 233
Query: 230 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
+ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 234 RKGVMSKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSLFFAT 293
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 294 TEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 351
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ E
Sbjct: 352 RYSYDILAKKLKRRHILRSELEKQMSLLSGTLDYSGFHRVDMVVEAVFEDLALKHQMVKE 411
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E C H + A+NTS++ ++ + + + +RI+G H+FSP MPL EI+ TSA+
Sbjct: 412 VEHECGEHTVFASNTSSLPIHQIAAEAAHPERIVGLHYFSPVDKMPLAEIIPHAGTSAET 471
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 472 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 531
Query: 529 IGP 531
+GP
Sbjct: 532 VGP 534
>gi|392980099|ref|YP_006478687.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392326032|gb|AFM60985.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
Length = 715
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 273/528 (51%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEDLARQGQQVMAE-IHALPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPHS 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R L +++ G L + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRVLPVRERILAGPLGRTLLFSMVGKKTEQKTKGNYPAAK 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +D P
Sbjct: 249 RILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPG-SDAEPAP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
V G G TA + V +K++N + + ++ N+ V R +
Sbjct: 308 LNAVGVLGGGLMGGGIAFVTAS-KAKLPVRIKDINPKGINHALQYSWQNLDQKVKRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + + M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS+
Sbjct: 367 ASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K K P+V
Sbjct: 427 LPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSPQTVSTVVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A L+ G + +D A+ FG P+GP Q
Sbjct: 487 VADKAGFYVNRILAPYINEAMRLLVEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|365971501|ref|YP_004953062.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
gi|365750414|gb|AEW74641.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
Length = 715
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 283/529 (53%), Gaps = 16/529 (3%)
Query: 13 DGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ N +N L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITVDVPNEKMNTLKAEFGVQVRAMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQNAQEAEELARQGQQVMAE-IHALSIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHA 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R L +++ G L + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRTLLFSMAGKKTEQKTKGNYPAAK 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L+VIE G+ G SG EAK F EL M S+ L ++FFA K P +P
Sbjct: 249 RILEVIEVGLSQGSSSGYAAEAKAFGELAMTPQSQALRNIFFASTEVKKDPGSE---AQP 305
Query: 306 RGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ + V+GGGLMG GI+ + V +K++N++ + ++ N+ V R +
Sbjct: 306 APLHAIGVLGGGLMGGGISFVTASKGKLPVRIKDINAKGINHALQYSWQNLDQKVKRRHI 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
++ + L ++ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS
Sbjct: 366 KANERDKTLALISGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++ + + + +++IG H+FSP MPL+E++ TS Q + ++ + K+ K P+
Sbjct: 426 SLPIGDIAARAQRPEQVIGLHYFSPVEKMPLVEVIPHASTSPQTVATVVKLAKMQGKTPI 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV + GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQ 534
>gi|288934205|ref|YP_003438264.1| fatty acid oxidation complex subunit alpha FadJ [Klebsiella
variicola At-22]
gi|288888934|gb|ADC57252.1| fatty acid oxidation complex, alpha subunit FadJ [Klebsiella
variicola At-22]
Length = 714
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 283/536 (52%), Gaps = 20/536 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 357
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWELLNK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP Q
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQ 534
>gi|402890280|ref|XP_003908416.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Papio
anubis]
Length = 763
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 283/551 (51%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG+PE+ LG +PG GGTQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|170724584|ref|YP_001758610.1| 3-hydroxyacyl-CoA dehydrogenase [Shewanella woodyi ATCC 51908]
gi|169809931|gb|ACA84515.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Shewanella woodyi ATCC
51908]
Length = 696
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 275/536 (51%), Gaps = 45/536 (8%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N+ +A+I + +PPVNA++ + A L F+ S+D + +++LT G F G DI
Sbjct: 24 NNTLAVIEINSPPVNAISQQLRAELLILFQSLASQD-LHSVLLTCTGRTFVAGADIKEM- 81
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
D + EL+ ++ KP++AA+ G LGGGLELA+ C R+A KT+L
Sbjct: 82 ------DTEPLEPHLPELIATIVR-FPKPVIAALHGTVLGGGLELALACDYRLAVSKTKL 134
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT----SE 187
GLPE+ LG+IPG GGT RL L+G+ AIE K ++E LI +V +E
Sbjct: 135 GLPEVNLGIIPGAGGTLRLMNLIGVKAAIEFACTGKPQNADEWLNTALIHKLVHKGDLTE 194
Query: 188 ELLKVSRLWAL-----------DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236
+ L R L I + W + R +L EA +L L ++A
Sbjct: 195 QALSFCRQLTLTESKQNTEADFSIQGQYIDWDSTEKRVKRLAKGVEAPALL-LNEIKAIY 253
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
+ +H + ++ ++F +L D ++ L + FF ++ K+
Sbjct: 254 SLGLSFEH-----------------ALKRQRRLFLQLRDSDQAKALRYAFFTEKKNQKLA 296
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 356
T R + V V+G G MG GIA I + ++ E E LL+G+ + +
Sbjct: 297 TSTS---STRTINTVGVVGAGNMGVGIARCFIDAGMDLIWIEQTEEALLRGMDNLRKGYQ 353
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
+T+G +T+ ++ ++++KG Y D+V+EA E + +K+ IF L++ C
Sbjct: 354 SKITKGHMTEQDLDDKMQLVKGSTVYDRLAPCDLVVEAAFEDLEVKKIIFKALDQHCKDS 413
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
ILATNTS +D+N + + TS D+++G HFFSPAHVM L+EIVR E T+ VI ++ +G
Sbjct: 414 AILATNTSYLDINSIAKVTSRPDQVVGLHFFSPAHVMKLIEIVRAENTADDVIKTMLALG 473
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
++K PV VG C GFA NR + Y + + ++ G + ID A+ SFG+ +GP
Sbjct: 474 VKLRKYPVEVGVCFGFAANRMYTRYGREIQQMLLEGNSIVAIDEAMTSFGMAMGPL 529
>gi|167993079|ref|ZP_02574174.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|378989774|ref|YP_005252938.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
gi|205328843|gb|EDZ15607.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|332989321|gb|AEF08304.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 715
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 273/528 (51%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVEEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>gi|145299117|ref|YP_001141958.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142851889|gb|ABO90210.1| fatty oxidation complex, alpha subunit [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 717
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 290/543 (53%), Gaps = 21/543 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++ V DG+ I+T+ P +N L + V ++ E + + + +V++G
Sbjct: 2 MSAKTFSLTVRQDGIGILTMDVPGESMNTLKVAFVDEIRAVLAEVKNNSELIGLVVVSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADISMLAACTSAEDAQTLSREG-QIIFAEIESLAIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL--KL 229
KLGL+D VV LL A+ +A + KP R + D G + E R+VL +
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKQGKP--RHQLKRDLQGKVLETNALGRKVLFDQA 234
Query: 230 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
+ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVMSKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSLFFAT 294
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 352
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ E
Sbjct: 353 RYSYDILAKKLKRRHILRSELEKQMSLLSGTLDYSGFHRVDMVVEAVFEDLALKHQMVKE 412
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E C H + A+NTS++ ++ + + + +RI+G H+FSP MPL EI+ TSA+
Sbjct: 413 VEHECGEHTVFASNTSSLPIHQIAAEAAHPERIVGLHYFSPVDKMPLAEIIPHAGTSAET 472
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 529 IGP 531
+GP
Sbjct: 533 VGP 535
>gi|388454076|ref|NP_001252819.1| trifunctional enzyme subunit alpha, mitochondrial [Macaca mulatta]
gi|380788603|gb|AFE66177.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
gi|383414407|gb|AFH30417.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
gi|384943176|gb|AFI35193.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
Length = 763
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 283/551 (51%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG+PE+ LG +PG GGTQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|218548205|ref|YP_002381996.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia fergusonii ATCC 35469]
gi|254788652|sp|B7LLD0.1|FADJ_ESCF3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218355746|emb|CAQ88359.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 714
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 285/535 (53%), Gaps = 16/535 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L A ++ +E +++ +V ++ F
Sbjct: 8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIDHCNTAMEAETLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I PKT LGLPE+ LG++PG GGTQRLPRLVGLS A++M+L K + + K GL+D
Sbjct: 127 ICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
+V LL+ A++ A + + RSL +++ G L + +++ +KT
Sbjct: 187 EIVPQSILLQA----AVERAKQERQTPRSLPVRERILAGPLGRSLLFRFVSKKTDQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P T
Sbjct: 243 NYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQSLRNIFFASTEVKKDPGST 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
++P + + ++GGGLMG GIA + V +K++N + + +K +
Sbjct: 303 ---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDINPQGINHALKYSWQLLDAK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R + + L + G DY F D+VIEAV E + LKQ++ +E+EK C H I
Sbjct: 360 VRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDLSLKQQMVAEVEKNCGLHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS+I ++ + + +++IG HFFSP MPL+E++ TS + I ++ + K
Sbjct: 420 FASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVIPHAATSEKTIATIVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP Q
Sbjct: 480 QGKTPIVVQDKAGFYVNRILAPYINEAIRLLTEGEKVETIDTALVKFGFPVGPIQ 534
>gi|401764607|ref|YP_006579614.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176141|gb|AFP70990.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 715
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 265/487 (54%), Gaps = 13/487 (2%)
Query: 52 IVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALG 111
+ ++ F G DIN+ + A + + +++ I P++AA+ G LG
Sbjct: 56 VFISAKPDNFIAGADINMIARAQSAQEAEDLARQGQQVMAE-INALPIPVIAAIHGACLG 114
Query: 112 GGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169
GGLELA+ CH+RI KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K +
Sbjct: 115 GGLELALACHSRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQL 174
Query: 170 TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-- 227
+ + K GL+D VV LL+ A+++A + + R L +++ + R +L
Sbjct: 175 RARQALKAGLVDDVVPHAILLEA----AVELALKGRQPKRPLPVRERVLAGPLGRTILFN 230
Query: 228 KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
+ + +KT N P + L+VIE G+ G SG EAK F EL M SR L +FF
Sbjct: 231 MVGKKTEQKTKGNYPAAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSRALRSIFF 290
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLK 346
A K P +P +R + V+GGGLMG GI+ + V +K++N + +
Sbjct: 291 ASTEVKKDPGSE---AEPAPLRAIGVLGGGLMGGGISFVTASKGKLPVRIKDINPKGINH 347
Query: 347 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 406
++ N+ V R + + + L M+ G DYS F D+VIEAV E + LKQ++
Sbjct: 348 ALQYSWQNLDQKVKRRHIKASERDKTLAMISGTTDYSGFAHRDLVIEAVFEDLALKQQMV 407
Query: 407 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466
+++E+ C H I A+NTS++ + + K + +++IG HFFSP MPL+E++ TS
Sbjct: 408 ADVEQHCASHTIFASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSP 467
Query: 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
Q I ++ + K K P+VV + GF VNR PY A L++ G + +D A+ FG
Sbjct: 468 QTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFG 527
Query: 527 LPIGPFQ 533
P+GP Q
Sbjct: 528 FPVGPIQ 534
>gi|400260686|pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
gi|400260687|pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 287/529 (54%), Gaps = 30/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 AVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFR 539
>gi|161407971|ref|YP_269853.2| multifunctional fatty acid oxidation complex subunit alpha
[Colwellia psychrerythraea 34H]
Length = 764
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 282/534 (52%), Gaps = 17/534 (3%)
Query: 12 NDGVA--IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
++G+A +I +I VN L + E + IVL +G G F G DIN
Sbjct: 51 DNGIAHLVIDVIGENVNTLKAEFTEQVNAVLAEIKVDKAITGIVLCSGKKGSFVAGADIN 110
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-- 126
+ +V + + + +L+E PIVAA++G LGGGLELAM CHAR+ +
Sbjct: 111 MLDACQSRDEVVALSRQG-QRIFSLLEQLPIPIVAAIDGACLGGGLELAMACHARVCSDN 169
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
KT LGLPE+ LG++PG GGTQRLP+LVGL KA++MML K + +++ K GL+D VV S
Sbjct: 170 SKTALGLPEVQLGLLPGSGGTQRLPQLVGLQKALDMMLTGKQLRAKQALKSGLVDDVVPS 229
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQAKKT-----APN 240
LL V+ A+ + R K ++ + + L E V K+ QA+KT N
Sbjct: 230 SVLLTVAEDLAISLRQRGKKTVK--RKQGLMDKLLENNAVGRKVVYQQAQKTVLAKTQGN 287
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P +D I GI G EA+ F +LVM D S L +FFA A K V D
Sbjct: 288 YPAPAKIIDCIRTGIESSPEKGYRVEAEHFADLVMSDESAQLRQLFFATTAMKKEQGVAD 347
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
+ P + K V+GGGLMG GIA N+ V +K+++ + + + +K + V
Sbjct: 348 V--MPEKMTKAGVLGGGLMGGGIAFVTATKANMPVRVKDISHKGIGQALKYSYQILNKKV 405
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + L M+ G ++Y+ FK +D+V+EAV E + LKQ + +E+E I
Sbjct: 406 KRRFLLNSEMQKQLAMITGSVEYTGFKALDIVVEAVFEDLTLKQNMVAEVEAQGHDKTIF 465
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +IG H+FSP MPL+EI+ ++TS Q I + + K
Sbjct: 466 ASNTSSLPIGKIATNAKRPENVIGLHYFSPVDKMPLVEIIPHDKTSDQTISNTVAFAKKQ 525
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +L+ G + +ID A+ FG P+GP Q
Sbjct: 526 GKTPIVVKDKAGFYVNRILAPYMNEAAILLLAGEPIDKIDKALVKFGFPVGPMQ 579
>gi|422806339|ref|ZP_16854771.1| fatty oxidation complex [Escherichia fergusonii B253]
gi|324112877|gb|EGC06853.1| fatty oxidation complex [Escherichia fergusonii B253]
Length = 714
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 285/535 (53%), Gaps = 16/535 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L A ++ +E +++ +V ++ F
Sbjct: 8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIDHCNTAMEAETLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I PKT LGLPE+ LG++PG GGTQRLPRLVGLS A++M+L K + + K GL+D
Sbjct: 127 ICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
+V LL+ A++ A + + RSL +++ G L + +++ +KT
Sbjct: 187 EIVPQSILLQA----AVERAKQERQTPRSLPVRERILAGPLGRSLLFRFVSKKTDQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P T
Sbjct: 243 NYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQSLRNIFFASTEVKKDPGST 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
++P + + ++GGGLMG GIA + V +K++N + + +K +
Sbjct: 303 ---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDINPQGINHALKYSWQLLDAK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R + + L + G DY F D+VIEAV E + LKQ++ +E+EK C H I
Sbjct: 360 VRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDLSLKQQMVAEVEKNCGLHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS+I ++ + + +++IG HFFSP MPL+E++ TS + I ++ + K
Sbjct: 420 FASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVIPHAATSEKTIATIVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP Q
Sbjct: 480 QGKTPIVVQDKAGFYVNRILAPYIDEAIRLLTEGEKVETIDTALVKFGFPVGPIQ 534
>gi|20127408|ref|NP_000173.2| trifunctional enzyme subunit alpha, mitochondrial precursor [Homo
sapiens]
gi|20141376|sp|P40939.2|ECHA_HUMAN RecName: Full=Trifunctional enzyme subunit alpha, mitochondrial;
AltName: Full=78 kDa gastrin-binding protein; AltName:
Full=TP-alpha; Includes: RecName: Full=Long-chain
enoyl-CoA hydratase; Includes: RecName: Full=Long chain
3-hydroxyacyl-CoA dehydrogenase; Flags: Precursor
gi|14328041|gb|AAH09235.1| Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [Homo sapiens]
gi|119621108|gb|EAX00703.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit, isoform CRA_a [Homo sapiens]
gi|123984943|gb|ABM83702.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [synthetic construct]
gi|123998787|gb|ABM87022.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [synthetic construct]
gi|189053609|dbj|BAG35861.1| unnamed protein product [Homo sapiens]
gi|317040156|gb|ADU87643.1| epididymis tissue sperm binding protein Li 14m [Homo sapiens]
Length = 763
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 281/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLE+A+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG +PG GGTQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|71145733|gb|AAZ26206.1| fatty oxidation complex, alpha subunit [Colwellia psychrerythraea
34H]
Length = 787
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 282/534 (52%), Gaps = 17/534 (3%)
Query: 12 NDGVA--IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
++G+A +I +I VN L + E + IVL +G G F G DIN
Sbjct: 74 DNGIAHLVIDVIGENVNTLKAEFTEQVNAVLAEIKVDKAITGIVLCSGKKGSFVAGADIN 133
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-- 126
+ +V + + + +L+E PIVAA++G LGGGLELAM CHAR+ +
Sbjct: 134 MLDACQSRDEVVALSRQG-QRIFSLLEQLPIPIVAAIDGACLGGGLELAMACHARVCSDN 192
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
KT LGLPE+ LG++PG GGTQRLP+LVGL KA++MML K + +++ K GL+D VV S
Sbjct: 193 SKTALGLPEVQLGLLPGSGGTQRLPQLVGLQKALDMMLTGKQLRAKQALKSGLVDDVVPS 252
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQAKKT-----APN 240
LL V+ A+ + R K ++ + + L E V K+ QA+KT N
Sbjct: 253 SVLLTVAEDLAISLRQRGKKTVK--RKQGLMDKLLENNAVGRKVVYQQAQKTVLAKTQGN 310
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P +D I GI G EA+ F +LVM D S L +FFA A K V D
Sbjct: 311 YPAPAKIIDCIRTGIESSPEKGYRVEAEHFADLVMSDESAQLRQLFFATTAMKKEQGVAD 370
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
+ P + K V+GGGLMG GIA N+ V +K+++ + + + +K + V
Sbjct: 371 V--MPEKMTKAGVLGGGLMGGGIAFVTATKANMPVRVKDISHKGIGQALKYSYQILNKKV 428
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + L M+ G ++Y+ FK +D+V+EAV E + LKQ + +E+E I
Sbjct: 429 KRRFLLNSEMQKQLAMITGSVEYTGFKALDIVVEAVFEDLTLKQNMVAEVEAQGHDKTIF 488
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +IG H+FSP MPL+EI+ ++TS Q I + + K
Sbjct: 489 ASNTSSLPIGKIATNAKRPENVIGLHYFSPVDKMPLVEIIPHDKTSDQTISNTVAFAKKQ 548
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +L+ G + +ID A+ FG P+GP Q
Sbjct: 549 GKTPIVVKDKAGFYVNRILAPYMNEAAILLLAGEPIDKIDKALVKFGFPVGPMQ 602
>gi|423125062|ref|ZP_17112741.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5250]
gi|376400507|gb|EHT13120.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5250]
Length = 714
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 275/537 (51%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLRT----AVELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L V+E G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVMETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 356
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ E+ + C P
Sbjct: 358 IQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVGEVGQHCRPE 417
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+ K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPIEHIDNALVKFGFPVGPIQ 534
>gi|343502937|ref|ZP_08740774.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|418478661|ref|ZP_13047758.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
gi|342812921|gb|EGU47906.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|384573696|gb|EIF04186.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
Length = 707
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 264/476 (55%), Gaps = 9/476 (1%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAKEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++M+L K + +++ KLG
Sbjct: 125 DYRVCSDSEKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDMILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
+ DAVV LL V++ + A ++K + + + + R+V+ + A+ K
Sbjct: 185 VADAVVPHTVLLDVAKSFVEKHAGKKKAKRKVSTKEKLISNTGLGRKVIFEQAAKKTNDK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILQVIRFGLEKGFEKGQKKEAERFGELVMTSESKALRSIFFA---TTEMK 301
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
+P+ + + AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KEHGGDAQPKPIARAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R L++ + + + L G D++ F D+VIEAV E + LKQ++ +++E
Sbjct: 362 EKQRKRHILSKAQLQSKMLQLSGGTDFTRFNHTDIVIEAVFEDLNLKQQMVADIESNAKD 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ ++ + EK + ++G H+FSP MPL+E++ + TS + I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAERPENVVGLHYFSPVEKMPLVEVIPHQGTSDETISTVVEF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV +C GF VNR PY A ++ G + ++D+A+ +FG P+GP
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQLDTALLNFGFPVGP 537
>gi|344280397|ref|XP_003411970.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Loxodonta africana]
Length = 763
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 283/551 (51%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + A L + E + D ++ A++++ G
Sbjct: 38 RTYINYGVKGDVAVVRINSPNSKVNTLNKELHAELVEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ + +V+ + + + +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSSCKTSQEVTQISQ-EAQSMFEKVEKSPKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
H RIA KT LG PE+ LG++PG GGTQRLP++VG+ A +MML ++I +++ K+G
Sbjct: 157 HYRIATKDKKTVLGSPEVLLGILPGAGGTQRLPKMVGIPGAFDMMLTGRNIRADKAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A ++A ++ R +KL S +
Sbjct: 217 LVDQLVEPLGPGIKPPEERTIEYLEEVAVTFAKELADKKISPKRDKGLVEKLTSYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P ++V++ GI G +G L E++ F EL M S
Sbjct: 277 FIRQQVYKKVEEKVQKQTKGLYPAPLKIIEVVKTGIEQGNDAGYLSESQKFGELAMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ +Q + G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHSQVQCKR----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLPALGRGQQQVFNGLNDKVKKKSLTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
+K K+ E+E P HC+ A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 NIKHKVLKEVEAVIPDHCVFASNTSALPISKIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS +TVG KV +VV + GF R P ++ GV ++D
Sbjct: 513 TTEKTSKDTTASAVTVGLQQGKVIIVVKDGPGFYTTRCLAPMMSEVIKILQEGVGPKKLD 572
Query: 520 SAIRSFGLPIG 530
S FG P+G
Sbjct: 573 SLTTGFGFPVG 583
>gi|206576247|ref|YP_002237269.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae 342]
gi|254788651|sp|B5XVW2.1|FADJ_KLEP3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|206565305|gb|ACI07081.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
342]
Length = 714
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 283/536 (52%), Gaps = 20/536 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKTDNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 357
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP Q
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQ 534
>gi|261252399|ref|ZP_05944972.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417954054|ref|ZP_12597094.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260935790|gb|EEX91779.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342816094|gb|EGU50999.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 707
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 271/477 (56%), Gaps = 11/477 (2%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAKEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
+ DAVV LL+V++ + + + K ++ + + + R+V+ + A+ +K
Sbjct: 185 VADAVVPETILLEVAKSFVEKNSGKSKSKRKASTKEKLISNTGLGRKVIFEQAAKKTNQK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEQGQQKEAERFGELVMTSESKALRSIFFA---TTEMK 301
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
P+ + AV+GGGLMG+GI+ + + +K+V+++ +L +K
Sbjct: 302 KEHGSDADPKAIANAAVLGGGLMGAGISHVSVAKAKVPTRIKDVSNDGVLNALKYNFKLF 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R +++ + + + L G +D++ F D+VIEAV E + LKQK+ +++E+
Sbjct: 362 EKQRKRRIISKAQLQSKMLQLSGGVDFTRFNHTDIVIEAVFEDLDLKQKMVADVEENAKD 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ ++ + EK + ++G H+FSP MPL+E++ E TS + I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAQRPENVVGLHYFSPVEKMPLVEVIPHETTSDETISTVVEF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV +C GF VNR PY +++A++L+S G + ++D A+ +FG P+GP
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLS-GEPIEQLDKALLNFGFPVGP 537
>gi|355751174|gb|EHH55429.1| hypothetical protein EGM_04638 [Macaca fascicularis]
Length = 763
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 283/551 (51%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG+PE+ LG +PG GGTQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEITAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|383936625|ref|ZP_09990048.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
gi|383702287|dbj|GAB60139.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
Length = 710
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 288/538 (53%), Gaps = 22/538 (4%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++++ +D V +IT+ +N L + + + +K +V ++G F
Sbjct: 8 SLQIRDDNVGVITMDIAGESMNVLKAAFADEISQLLSDIKANSQLKGLVFISGKPDSFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + + ++ L E P+VAA+ G LGGGLELAM CHAR
Sbjct: 68 GADISMLDGCKTAEEAQAIGRMGQQMFDQL-EQLPIPLVAAIHGPCLGGGLELAMACHAR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A KT LGLPE+ LG++PG GGTQRLP+LVGL KA++M+L K + + + K GL+D
Sbjct: 127 VATSDSKTVLGLPEVQLGLLPGSGGTQRLPKLVGLQKALDMILTGKQLRAAQAKKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLARLQA-K 235
VV + LL + AL +R+P +L +G + E R +L AR Q
Sbjct: 187 EVVPNSILLDAAVKLALKGKPKREPVKLNL-----VGKVLERTPFGRNILFSQARKQTLS 241
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P LDVI+ G+ G +G+ EAK F EL M S L +FFA T+++
Sbjct: 242 KTQGNYPAPLKILDVIKTGVDSGMQAGLAAEAKAFGELCMTKESAALRSLFFA---TTQM 298
Query: 296 PNVTDIG-LKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 353
T G KP VRK AV+GGGLMG GIA I V +K++N + + +K +
Sbjct: 299 KKETGAGETKPNKVRKAAVLGGGLMGGGIANVTATKAGIAVRIKDINEQGISNALKYSYS 358
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
+ R +++ + L ++ G DYS F D D+V+EAV E + LKQ++ +++E+ C
Sbjct: 359 LLEKKFNRRFISKAEMQKQLLLITGTTDYSGFHDADIVVEAVFEDLALKQQMVADIEQHC 418
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
+ I A+NTS++ + + K + +IG H+FSP MPL+E++ E TSAQ I +
Sbjct: 419 SENTIFASNTSSLPIKQIAAKAQRPENVIGLHYFSPVDKMPLVEVIAHEGTSAQTIATTV 478
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP
Sbjct: 479 AFARKQGKTPIVVKDGAGFYVNRILALYMNEAANVLLEGEPVEKIDKALVKFGFPVGP 536
>gi|157144722|ref|YP_001452041.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter koseri ATCC BAA-895]
gi|166972667|sp|A8ADP2.1|FADJ_CITK8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157081927|gb|ABV11605.1| hypothetical protein CKO_00449 [Citrobacter koseri ATCC BAA-895]
Length = 715
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++++ P +N L ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVSIDVPGEKMNTLKAEFATQVRAILKQIRENKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I+ P+VAA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGNCKSAQEAETLARQGQQIMAE-IQALSVPVVAAIHGACLGGGLEMALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + ++ ++GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + + R+L +++ G L +++ +KT
Sbjct: 187 EVVPHAILLEA----AVELAIKGRSAQRNLPVRERILAGPLGRTLLFRMVSKKTGQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAQPGPLASVGVLGGGLMGGGIAYVTA-CKGGLSVRIKDINAKGINHALKYSWDQLETKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKAGERDKQLALISGSTDYRGFSHRDLVIEAVFEDLALKQQMVAEVEQNCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRLLTEGERVEAIDAALVKFGFPVGPIQ 534
>gi|149728089|ref|XP_001502833.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Equus
caballus]
Length = 762
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 279/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + + + E + D ++ A++++ G
Sbjct: 37 RTHINYGVKGDVAVVRINSPNSKVNTLNKELQSEFVEVMNEIWASDQIRSAVLISSKPGC 96
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + + +E KPIVAA+ G LGGGLELA+ C
Sbjct: 97 FIAGADINMLAACKTNQEVTQISQEG-QRIFEKLEKSPKPIVAAISGSCLGGGLELAISC 155
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG++PG GGTQRLP++VG+ A +MML ++I ++ K+G
Sbjct: 156 QYRIATKDKKTVLGSPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIHADRAKKMG 215
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R DKL S++
Sbjct: 216 LVDQLVEPLGPGLKPPEERTIEYLEEVAVTFAKGLADKKISPKRDKGLVDKLTSVAMGIP 275
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
+++ K + +K + P +DV++ GI G +G L E++ F EL M S
Sbjct: 276 FVRQQIYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELAMTKES 335
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 336 KALIGLYHGQVLCKK----NKFGAPQKEVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 391
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 392 TLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 451
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HC+ A+NTS + +N + + +++IG H+FSP M LLEI+
Sbjct: 452 SLKHRVLKEVEAVIPDHCVFASNTSALPINEISAVSKRPEKVIGMHYFSPVDKMQLLEII 511
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 512 TTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 571
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 572 SLTTSFGFPVG 582
>gi|300114046|ref|YP_003760621.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
gi|299539983|gb|ADJ28300.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
Length = 737
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 287/551 (52%), Gaps = 24/551 (4%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R+ GN + + + + VN L + ++ ++K +VL F G
Sbjct: 10 RIERREGNAAIIWLDVPDVSVNTLQADFAQDFNQVLAQLSADKELKVVVLASAKEDFIAG 69
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI + ++ A + + + + L E P+VAA+ G+ LGGGLELA+ C R+
Sbjct: 70 ADIKMLTQLPDAEAARQLSRTAQKAMAQL-EAFPLPVVAAIHGVCLGGGLELALACRGRV 128
Query: 125 A--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
A + +T+LG PE+ LGVIPG GGTQRLPRLVGL A+ ++L K++++ + LGL+D
Sbjct: 129 ATSSDRTRLGQPEVKLGVIPGVGGTQRLPRLVGLEAALNVILTGKTMSASKARALGLVDE 188
Query: 183 VVTS------EELLKVSRLWALDIAARRKPW------IRSLHRTDKLGSLSEAREVL--K 228
VV D + P+ + S+ +L SL + L
Sbjct: 189 VVPQPVLLEAALARARELARENDDKSEASPFQWFGQLLSSVLSWRQLRSLLLEKNSLGRS 248
Query: 229 LARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 283
L QA+K T N+P L+ I+ G+ G +G E + F +L + +R L+
Sbjct: 249 LVFNQARKKVLSHTHGNLPAPLQALEAIKTGMEQGLEAGFKAEVEAFGDLAVSTKARNLM 308
Query: 284 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSE 342
+F AQ A K + TD + PR VRKV V+G GLMGSG+A + V LK+V E
Sbjct: 309 ALFLAQSALKK-DSGTDEKVAPRKVRKVGVLGAGLMGSGVAYVTAAKARLPVRLKDVKQE 367
Query: 343 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 402
L +G++ + V V + ++T + + L +++ +Y+ FK D+VIEAV+E + +K
Sbjct: 368 VLRQGLRVLWNAVTEQVNKRRMTAGEKDRVLALVRPTTEYTGFKQADVVIEAVVEDLEVK 427
Query: 403 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 462
Q++ E+E P I A+NTS+I ++ + E + + ++G H+FSP +PLLE++ TE
Sbjct: 428 QQVLREVETHGSPEMIFASNTSSIPIHKIAEASDRPEAVVGMHYFSPVPKVPLLEVIVTE 487
Query: 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 522
+++ +VI + +GK K +VV + GF R PY A L++ GV + ID A+
Sbjct: 488 KSAPEVIATCVALGKQQNKTVIVVRDGAGFYTTRILAPYINEATHLLAEGVSIQDIDEAL 547
Query: 523 RSFGLPIGPFQ 533
+FG P+GP +
Sbjct: 548 VNFGFPVGPLK 558
>gi|419959285|ref|ZP_14475340.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
gi|388605796|gb|EIM35011.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
Length = 715
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 278/530 (52%), Gaps = 18/530 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAKSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHA 192
Query: 188 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPNMPQH 244
LL+ + AL ++P +R LG R +L + + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPLPVRERILAGPLG-----RTLLFNIVGKKTEQKTKGNYPAA 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
L VIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 248 TRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRGIFFASTEVKKDPGSE---AE 304
Query: 305 PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
P +R V V+GGGLMG GIA I + V +K++N + + ++ N+ V R
Sbjct: 305 PAPLRAVGVLGGGLMGGGIAFVTAIKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRH 364
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ + + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NT
Sbjct: 365 IKASERDKTLAMITGATDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNT 424
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S++ + + K +++IG H+FSP MPL+E++ TS Q I ++ + K K P
Sbjct: 425 SSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTP 484
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+VV + GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 485 IVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDDALVKFGFPVGPIQ 534
>gi|161502467|ref|YP_001569579.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
str. RSK2980]
gi|160863814|gb|ABX20437.1| hypothetical protein SARI_00511 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 714
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 283/540 (52%), Gaps = 14/540 (2%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
M T+ V D VA++++ P VN L A + ++ ++ +V ++
Sbjct: 1 MTTSAFTLNVRLDNVAVVSIDVPGEKVNTLKAEFAAQARAILKQIRENKVLQGVVFISAK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DIN+ + A + + +L+ I+ P++AA+ G LGGGLE+A
Sbjct: 61 ADNFIAGADINMIGRCQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH RI KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + +
Sbjct: 120 LACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQAL 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQ- 233
K GL+D VV LL+ A+++A + + R+L +++ + + R +L +L R +
Sbjct: 180 KTGLVDDVVPQTILLEA----AVELAKKDRLAQRTLPVRERILAGALGRTLLFRLVRKKT 235
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
A+KT N P + +DVIE G+ G +G EA F EL M S+ L ++FFA
Sbjct: 236 AQKTQGNYPATERIIDVIETGLAQGSGNGYDAEACAFGELAMTPQSQALRNLFFASTQVK 295
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 353
K P +D P + G G + TA + V +K++N++ + +K
Sbjct: 296 KDPG-SDAPSGPLNSVGILGGGLMGGGIALVTA-CKGGLPVRIKDINAKGINHALKYSWD 353
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
+ V R + + + L ++ G DY F D++IEAV E + LKQ++ +E+E+ C
Sbjct: 354 QLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLIIEAVFEDLSLKQQMVAEVEQNC 413
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
H I A+NTS++ + + +++IG HFFSP MPL+E++ TSAQ I +
Sbjct: 414 ASHTIFASNTSSLPIGDIAAYAGRPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTV 473
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 474 KLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 533
>gi|383189174|ref|YP_005199302.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371587432|gb|AEX51162.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 734
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 288/528 (54%), Gaps = 18/528 (3%)
Query: 15 VAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ 71
V IIT+ P VN L + ++A +K +VL +G F G DI++
Sbjct: 31 VGIITIDVPGEKVNTLKAEFAQQICTILQKAQQYPGLKGLVLISGKTDSFIAGADISMIS 90
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKT 129
A + + + + V+ I P+VAA+ G LGGGLELA+ CHAR+ + KT
Sbjct: 91 GCQTAAEATQLAQKG-QTVMAQIASFSVPVVAAIHGACLGGGLELALACHARVCSLDEKT 149
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
QLGLPE+ LG++PG GGTQRLPRL+G KA+E+ML +SI +++ ++GL+D V L
Sbjct: 150 QLGLPEVQLGLLPGSGGTQRLPRLIGAPKALELMLTGRSIRAKQALRMGLVDDAVPYSVL 209
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAK-KTAPNMPQHQAC 247
L+ AL+ A+ + L +L + VL R QA+ KT N P +
Sbjct: 210 LQT----ALERVAKGRKSRPPLPWQARLAGGPLGKSVLFHFVRKQARAKTHGNYPATEKI 265
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 307
+DV+ G+ G +G EA F ELVM S L +FFA A K +P
Sbjct: 266 IDVVRTGLDQGSGNGYQAEANAFGELVMTPESAALRSLFFASTALKKEKGGD---AEPLP 322
Query: 308 VRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 366
VR+V ++GGGLMG GIA I + V +K++N E + +K + V +LT+
Sbjct: 323 VRRVGILGGGLMGGGIAHVTAIKAGLPVRIKDINHEGIRHALKYSWDLLEKKVRSRRLTR 382
Query: 367 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426
+ + ++ G DYS F D+V+EAV E + LKQ + +E+E+ H I A+NTS++
Sbjct: 383 TEQQRQMMLISGTTDYSGFAQTDIVVEAVFEDLSLKQSMVAEIEQNAALHTIFASNTSSL 442
Query: 427 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486
++ + E+ S +++IG H+FSP MPL+E++ TSAQ I +++ K K +VV
Sbjct: 443 PIHKIAEQASRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAQTISTTVSLAKKQGKTAIVV 502
Query: 487 GNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
G+ GF VNR PY +++AR L++ G V ID A+ +FG P+GP Q
Sbjct: 503 GDRAGFYVNRILAPYINEAARCLIN-GEPVDHIDKALVNFGFPVGPIQ 549
>gi|311278706|ref|YP_003940937.1| fatty acid oxidation complex subunit FadJ [Enterobacter cloacae
SCF1]
gi|308747901|gb|ADO47653.1| fatty acid oxidation complex, alpha subunit FadJ [Enterobacter
cloacae SCF1]
Length = 715
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 282/529 (53%), Gaps = 16/529 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA+I + P +N L A ++ ++ ++ +VL + F G DIN+
Sbjct: 14 DNVAVIAIDVPGEKMNTLKAEFGAQVRAILKQVRDNRSLRGVVLISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 74 IGGCRTAQEAEALARQGQQIMAE-IHALSVPVIAAIHGACLGGGLELALACHGRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALRAGLVDEVVPHS 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQ 245
LL A+++A + +P R L ++L + AR VL + + +KT N P
Sbjct: 193 ILLDA----AVEMAKKERPASRRLPVRERLLAGPLARNVLFSLVGKKTEQKTQGNYPATG 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L VIE G+ HG SG EA+ F EL M S+ L +FFA K P L
Sbjct: 249 KILQVIETGLSHGISSGYEAEARAFGELAMTPQSKALRGIFFASTDVKKDPGAPVEALP- 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+R AV+GGGLMG GIA A + V +K++NS + +K + V R L
Sbjct: 308 --LRSAAVLGGGLMGGGIAFALASKAQLPVRIKDINSLGINHALKYSWELLDAKVRRRHL 365
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ ++ + ++ G DY F D+VIEAV E + LKQ++ +++E+ PH I A+NTS
Sbjct: 366 KAAERDSQMALISGTTDYRGFAHRDVVIEAVFEDLALKQQMVADVERQFAPHTIFASNTS 425
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++ + + + +++IG HFFSP MPL+E++ TS + ++ + + + K P+
Sbjct: 426 SLPIGDIAAHAARAEQVIGLHFFSPVEKMPLVEVIPHAGTSDATVATVVRLARQMGKTPI 485
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV + GF VNR PY A +++ GV + +ID+A+ FG P+GP Q
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRMLTEGVSIEQIDNALVKFGFPVGPIQ 534
>gi|157140862|ref|XP_001647675.1| 3-hydroxyacyl-coa dehyrogenase [Aedes aegypti]
gi|108867146|gb|EAT32343.1| AAEL015524-PA [Aedes aegypti]
Length = 741
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 280/544 (51%), Gaps = 32/544 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINV 69
D V ++TL +P VN+L + A F + + V A+V++ G F G DI +
Sbjct: 21 DNVLVVTLDSPNVKVNSLGAEVQAEFDAVFRDLETNSAVNSAVVISAKPGCFVAGADITM 80
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
+K A + + + +L+ N +E +KP+VAA+ G+ LGGGLELAM CH RIA
Sbjct: 81 LEKCKSAEEATKISHEG-QLMFNKLEKSRKPVVAAINGVCLGGGLELAMACHYRIAVKDK 139
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS- 186
KT LGLPE+ LG++PG GGTQRLP+L + A+++ L K++ +++ KLG++D +VT
Sbjct: 140 KTNLGLPEVMLGLLPGAGGTQRLPKLSSIPTALDLALTGKNVKADKAKKLGIVDMLVTPL 199
Query: 187 ------------EELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEARE-VL 227
E L KV+ A D+A+ R+K + + TD S+ ++ V
Sbjct: 200 GPGLKSAEQNTIEYLEKVAIQTAKDLASDKLKVNRKKSGLVNAI-TDYAFSIDWVKDKVF 258
Query: 228 KLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
AR Q K + + P +DVI G+ G +G E K F EL S+GL+ +F
Sbjct: 259 GKAREQVMKLSGGLYPAPLKIIDVIRVGVDKGFEAGSEAERKGFGELSQTPQSKGLIGLF 318
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346
Q K G + + V+G GLMG+GI I VV+K+ L +
Sbjct: 319 RGQTECKK----NRFGKPANPPKNIGVLGAGLMGAGIVQVSIDKGYQVVMKDTTEAGLGR 374
Query: 347 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 406
G+ ++ ++ V R +++ + + L L L Y FK+ D+VIEAV E++ +K K+
Sbjct: 375 GVGQVQNGLQNAVKRKRISGIEKDQILSNLNATLSYDAFKNTDIVIEAVFENIDIKHKVI 434
Query: 407 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466
ELE+ P HCI+ATNTS I + + +S + ++G H+FSP M LLEI+ TS
Sbjct: 435 KELEQVVPKHCIIATNTSAIPITKIAAGSSRPENVVGMHYFSPVDKMQLLEIITHPGTSK 494
Query: 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
+ + VG KV + VG+ GF R A L+ GVD +D +SFG
Sbjct: 495 ETAAAAVEVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDKMTKSFG 554
Query: 527 LPIG 530
P+G
Sbjct: 555 FPVG 558
>gi|421495832|ref|ZP_15943086.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
gi|407185171|gb|EKE58974.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
Length = 716
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 292/543 (53%), Gaps = 21/543 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGN 57
M+A ++++ DG+ I+T+ P +N L ++ E +RD + ++ +G
Sbjct: 2 MSAKTFSLDIRKDGIGILTMDVPGESMNTLKAAFADEIRTVLAEIKGNRDLIGLVIASGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + ++V IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADISMLAACTSARDAETLSREG-QVVFAEIEALTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTEHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLA 230
KLGL+D VV LL+ A+ +A + KP R + D G + E R+VL A
Sbjct: 181 KLGLVDDVVPPSILLEA----AIKLAKKGKP--RHTLKRDLQGKVLETNALGRKVLFDQA 234
Query: 231 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289
R K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVKAKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSIFFAT 294
Query: 290 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 348
K V+ G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVSYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVGSAGIGNAM 352
Query: 349 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 408
+ + + R +L + + + +L G LDY+ F VDMV+EAV E + LK ++ ++
Sbjct: 353 RYSYDLLAKKLKRRQLLRSELEKQMSLLTGTLDYAGFHRVDMVVEAVFEDLALKHQMVAD 412
Query: 409 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468
+E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ TS +
Sbjct: 413 VERECGEHTVFASNTSSLPIHQIAANAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSPET 472
Query: 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 529 IGP 531
+GP
Sbjct: 533 VGP 535
>gi|290508408|ref|ZP_06547779.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
gi|289777802|gb|EFD85799.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
Length = 714
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 283/536 (52%), Gaps = 20/536 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRRVRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 357
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V + +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMALISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + S +++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAHASRPEQVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP Q
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQ 534
>gi|118488579|gb|ABK96102.1| unknown [Populus trichocarpa]
Length = 335
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/144 (88%), Positives = 136/144 (94%)
Query: 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 449
MVIEAVIESVPLKQKIFSE+EK CPPHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSP
Sbjct: 1 MVIEAVIESVPLKQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSP 60
Query: 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 509
AH+MPLLEIVRTE+TSAQ ILDLMTVGK IKKVPVVVGNCTGFAVNRAFFPY+QSA +LV
Sbjct: 61 AHIMPLLEIVRTEKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILV 120
Query: 510 SLGVDVFRIDSAIRSFGLPIGPFQ 533
LGVDVFRID I SFGLP+GP+Q
Sbjct: 121 HLGVDVFRIDKLISSFGLPMGPYQ 144
>gi|157125238|ref|XP_001654257.1| 3-hydroxyacyl-coa dehyrogenase [Aedes aegypti]
gi|157125240|ref|XP_001654258.1| 3-hydroxyacyl-coa dehyrogenase [Aedes aegypti]
gi|108873690|gb|EAT37915.1| AAEL010146-PA [Aedes aegypti]
gi|108873691|gb|EAT37916.1| AAEL010146-PB [Aedes aegypti]
Length = 770
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 280/544 (51%), Gaps = 32/544 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINV 69
D V ++TL +P VN+L + A F + + V A+V++ G F G DI +
Sbjct: 50 DNVLVVTLDSPNVKVNSLGAEVQAEFDAVFRDLETNSAVNSAVVISAKPGCFVAGADITM 109
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
+K A + + + +L+ N +E +KP+VAA+ G+ LGGGLELAM CH RIA
Sbjct: 110 LEKCKSAEEATKISHEG-QLMFNKLEKSRKPVVAAINGVCLGGGLELAMACHYRIAVKDK 168
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS- 186
KT LGLPE+ LG++PG GGTQRLP+L + A+++ L K++ +++ KLG++D +VT
Sbjct: 169 KTNLGLPEVMLGLLPGAGGTQRLPKLSSIPTALDLALTGKNVKADKAKKLGIVDLLVTPL 228
Query: 187 ------------EELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEARE-VL 227
E L KV+ A D+A+ R+K + + TD S+ ++ V
Sbjct: 229 GPGLKSAEQNTIEYLEKVAIQTAKDLASDKLKVNRKKSGLVNAI-TDYAFSIDWVKDKVF 287
Query: 228 KLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 286
AR Q K + + P +DVI G+ G +G E K F EL S+GL+ +F
Sbjct: 288 GKAREQVMKLSGGLYPAPLKIIDVIRVGVDKGFEAGSEAERKGFGELSQTPQSKGLIGLF 347
Query: 287 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346
Q K G + + V+G GLMG+GI I VV+K+ L +
Sbjct: 348 RGQTECKK----NRFGKPANPPKNIGVLGAGLMGAGIVQVSIDKGYQVVMKDTTEAGLGR 403
Query: 347 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 406
G+ ++ ++ V R +++ + + L L L Y FK+ D+VIEAV E++ +K K+
Sbjct: 404 GVGQVQNGLQNAVKRKRISGIEKDQILSNLNATLSYDAFKNTDIVIEAVFENIDIKHKVI 463
Query: 407 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466
ELE+ P HCI+ATNTS I + + +S + ++G H+FSP M LLEI+ TS
Sbjct: 464 KELEQVVPKHCIIATNTSAIPITKIAAGSSRPENVVGMHYFSPVDKMQLLEIITHPGTSK 523
Query: 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 526
+ + VG KV + VG+ GF R A L+ GVD +D +SFG
Sbjct: 524 ETAAAAVEVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDKMTKSFG 583
Query: 527 LPIG 530
P+G
Sbjct: 584 FPVG 587
>gi|862457|dbj|BAA03941.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase alpha-subunit
of trifunctional protein [Homo sapiens]
Length = 763
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 281/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G +GGGLE+A+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCVGGGLEVAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG +PG GGTQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|295098035|emb|CBK87125.1| short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 715
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 278/530 (52%), Gaps = 18/530 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAIRGLVFISAKPHNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAKSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKSGLVDEVVPHA 192
Query: 188 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQH 244
LL+ + AL ++P +R LG R +L + + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPLPVRERILAGPLG-----RTLLFNMVGKKTEQKTKGNYPAA 247
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
L VIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 248 TRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRGIFFASTEVKKDPGSE---AE 304
Query: 305 PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 363
P +R V V+GGGLMG GIA + V +K++N + + ++ N+ V R
Sbjct: 305 PAPLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRH 364
Query: 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423
+ + + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NT
Sbjct: 365 IKASERDKTLSMITGATDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNT 424
Query: 424 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 483
S++ + + K +++IG H+FSP MPL+E++ TS Q I ++ + K + K P
Sbjct: 425 SSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKLGKTP 484
Query: 484 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+VV + GF VNR PY A L++ G + +D A+ FG P+GP Q
Sbjct: 485 IVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDDALVKFGFPVGPIQ 534
>gi|410955662|ref|XP_003984470.1| PREDICTED: LOW QUALITY PROTEIN: trifunctional enzyme subunit alpha,
mitochondrial [Felis catus]
Length = 763
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 279/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSRELQSEFVEVMNEIWANDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ A +V+ + + L E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLASCKSAEEVTQVSQEGQRMFEKL-EKSTKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG++PG GGTQRLP++VG+ A +MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGSPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +++ ++ R +KL S + +
Sbjct: 217 LVDQLVEPLGPGLKPSEERTIEYLEEVAVTFAKELSDKKISLKRDKGLVEKLTSYAMSIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
+++ K + +K + P +D ++ GI G +G + E++ F EL M S
Sbjct: 277 FVRQQIYKKVEEKVRKQTKGLYPAPLKIIDAVKTGIEQGNDAGYVSESQKFGELAMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG GIA + I +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGTPQKDVKHLAILGAGLMGXGIAQVSVDKGIKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLAGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
+K ++ E+E P HC+ A+NTS + + + + +++IG H+FSP M LLEI+
Sbjct: 453 NVKHRVLKEVEAVVPDHCVFASNTSALPIRQIASVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS ++ VG KV VVV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTTASVVAVGLKQGKVIVVVKDGPGFYTTRCLAPMMSEVLRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|260786960|ref|XP_002588524.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
gi|229273687|gb|EEN44535.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
Length = 719
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 279/531 (52%), Gaps = 31/531 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PP+N L + + L ++A V++IV+ G G F+ G D+ F
Sbjct: 10 VAVLQINDPPLNVLGHDVRSQLMSGLQQALQDKAVRSIVIMGKGQTFTAGADVKEF---- 65
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ +V + KP+V A+ G LGGG+ LA+ H R+A ++GLP
Sbjct: 66 --GTEKVFWEPTLHSLVEAVSAATKPVVTAIHGTTLGGGVALALASHYRLADSSAKMGLP 123
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++P G TQRLPRLVGL A+ M+ +++++++ GL+D VV ++LLK +
Sbjct: 124 EVQLGILPTCGVTQRLPRLVGLQTAVRMVTSGQTLSAQQALTAGLLDKVV-PDDLLKKAV 182
Query: 195 LWALDI------AARRKPW-IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+A + A R W + + R + + L AR+ L A + QA
Sbjct: 183 GFARSVDVQGLEARRVSSWTVPDVDRAEDV--LDAARKTLVRRSRGAIAPLTGLQAIQAS 240
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VP---NVTDIG 302
L E +G+ +EA++ + L + L + FFA+RA + +P NV
Sbjct: 241 LLPFE--------TGMKREAELGRYLWTSWQAAALRYAFFAERAVKRWHIPRNKNVNYRT 292
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
++P ++ V V+G G MG GI+ + + + VVL EVN L KG + ++ +
Sbjct: 293 VEPMDIKSVGVLGAGTMGIGISISLLQAGLKVVLTEVNKAQLDKGKSYCKFWLKKSNSNT 352
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+L+ K L+ DYS+ ++VD+VIEAV E + LK+K+F +L+ P ILATN
Sbjct: 353 ELSGGKPQPM--QLRATTDYSQLREVDLVIEAVFEDLALKKKVFRQLDAVTNPRTILATN 410
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + T D++IG HFFSPA VM LLE + TS + I M +G I KV
Sbjct: 411 TSGLDIDKIAAATQRPDKVIGTHFFSPAQVMRLLENIYGRHTSGETIATAMQLGATIGKV 470
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V+VGNC GF NR A L+ G D +D A+ FG +GPF+
Sbjct: 471 GVLVGNCPGFVGNRMKGLNFTEAMFLLEEGADPQDVDKALEEFGFAMGPFR 521
>gi|595267|gb|AAA56664.1| 78 kDa gastrin-binding protein [Homo sapiens]
Length = 763
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 280/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG PE+ LG++PG GGTQRLP++VG+ +MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGAPEVLLGILPGAGGTQRLPKMVGVPAVFDMMLTGRNIRADSAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTPSFGFPVG 583
>gi|423121447|ref|ZP_17109131.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5246]
gi|376394282|gb|EHT06933.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5246]
Length = 714
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 276/534 (51%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+++ D VA+IT+ +P +N L ++ + ++ +VL + F
Sbjct: 8 TLDIRPDNVAVITIDSPGEKMNTLKAEFGQQVRAIVRQIRDNKTLRGVVLISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCATAQEAEALARQGQQIMAE-IHGLAIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + + + K GL+D
Sbjct: 127 VCSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRARQALKAGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 239
VV LL+ A+++A + +P RS+ +++ + R +L + + +KT
Sbjct: 187 EVVPQSILLQT----AVELALKGRPASRSMPIRERVLAGPLGRNLLFRLVGKKTRQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-DRGA 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++ + + +K + V
Sbjct: 302 DAQAGPLNRIGILGGGLMGGGIAYVTA-CKGGLPVRIKDIQARGINHALKYSWDLLDKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D+VIEAV E + LKQ++ +E+E C P I
Sbjct: 361 RRRYLRASERDRQLALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVAEIEAHCSPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + S ++IG HFFSP MPL+E++ + T Q I ++ + K+
Sbjct: 421 ASNTSSLPIGDIAAQASRPGQVIGLHFFSPVEKMPLVEVIPHQHTDPQTIATVVKLAKMQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPLDHIDKSLVKFGFPVGPIQ 534
>gi|334704887|ref|ZP_08520753.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas caviae Ae398]
Length = 715
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 288/547 (52%), Gaps = 29/547 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++++ DG+ I+T+ P +N L ++ E D + ++++G
Sbjct: 1 MSAKTFSLDIRKDGIGILTMDVPGESMNTLKASFADEIRTLLAEVKGNGDLIGLVIVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + ++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFVAGADIAMLAACTSAQDAEALSRAGQDVFAE-IETLGIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAR 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGS---LSEARE 225
KLGL+D +V LL+ A+ +A + KP R L T+K G +AR+
Sbjct: 180 KLGLVDDMVPPSILLEA----AIKLAKKGKPRHHLKRDLQGKVLETNKFGRKVLFDQARK 235
Query: 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 285
+K KT N P + ++V+ G+ G +G+L EA+ F ELVM S L +
Sbjct: 236 GVK------AKTRGNYPAPERIIEVVRIGVEEGMQAGLLAEARHFGELVMTPESAALRSL 289
Query: 286 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYL 344
FFA K V+ G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 290 FFATTEMKK--EVSYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGI 347
Query: 345 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404
++ + + R +L + + + +L G LDYS F VDMV+EAV E + LK +
Sbjct: 348 GNAMRYSYDLLARKLKRRQLLRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDINLKHQ 407
Query: 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464
+ ++E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ T
Sbjct: 408 MVQDVERECGEHTVFASNTSSLPIHQIASAATHPERVVGLHYFSPVDKMPLAEIIPHAGT 467
Query: 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 524
SA+ + + + K P+VV + GF VNR PY A LV G V +D A+
Sbjct: 468 SAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLD 527
Query: 525 FGLPIGP 531
FG P+GP
Sbjct: 528 FGFPVGP 534
>gi|420368879|ref|ZP_14869611.1| enoyl-CoA hydratase/isomerase family protein, partial [Shigella
flexneri 1235-66]
gi|391321811|gb|EIQ78527.1| enoyl-CoA hydratase/isomerase family protein, partial [Shigella
flexneri 1235-66]
Length = 458
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 161/437 (36%), Positives = 240/437 (54%), Gaps = 10/437 (2%)
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157
P++AA+ G LGGGLELA+ CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S
Sbjct: 28 PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS 87
Query: 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL 217
A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++
Sbjct: 88 TALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERI 143
Query: 218 --GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 275
G L A + + KT N P + L+V+E G+ G SG EA+ F EL M
Sbjct: 144 LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAM 203
Query: 276 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 335
S+ L +FFA K P +D P + G G TA + V
Sbjct: 204 TPQSQALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVR 261
Query: 336 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 395
+K++N + + +K + G V R L + + L ++ G DY F D++IEAV
Sbjct: 262 IKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAV 321
Query: 396 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 455
E++ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL
Sbjct: 322 FENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPL 381
Query: 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 515
+EI+ TSAQ I + + K K P+VV + GF VNR PY A +++ G V
Sbjct: 382 VEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERV 441
Query: 516 FRIDSAIRSFGLPIGPF 532
ID+A+ FG P+GP
Sbjct: 442 EHIDAALVKFGFPVGPI 458
>gi|351709605|gb|EHB12524.1| Peroxisomal bifunctional enzyme [Heterocephalus glaber]
Length = 714
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 279/525 (53%), Gaps = 30/525 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVN +++P++ G+++ ++A + +KAIV++G G F G DI+ F+
Sbjct: 11 LALIRLRNPPVNTISLPVIRGIREGLKKAALDNTIKAIVISGADGNFCAGADIHSFK--- 67
Query: 75 GAGDVSLMPDVSVE---LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P S E L+V+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + Q+
Sbjct: 68 -------APISSAEGLGLLVDEIQRYGKPVVAAIQGVALGGGLELALGCHYRIAHAQAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+T+G++PG GTQ LPRL+G + I + E KLG++D V+ S+ L +
Sbjct: 121 GFPEVTIGILPGGRGTQLLPRLIG----------RRYILAGEALKLGILDEVMKSDSLEE 170
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ + +P R L+R + SLS A + +K P + C+ +
Sbjct: 171 AIKFTQKILDQPLEP-RRILNRP--VPSLSNMENTFTEAFAKMRKQYPGYLAPETCVRSV 227
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGV 308
+ + + G+ KE ++F+ L +R L + FFA+R+ +K + K R +
Sbjct: 228 QASMKYPYEEGIRKEEELFQYLRESGQARALQYAFFAERSVNKWSTPSGASWKTATARPI 287
Query: 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 368
V V+G G MG GIA + I V+ E + + L K + + + + + Q
Sbjct: 288 SSVGVLGLGTMGRGIAISFARVGIPVIAVESDQKQLEAAKKIVTSTLEKEAAKS-MQQSG 346
Query: 369 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
+ + E VD+VIEAV E + LK+++F+EL C P L TNTS +D+
Sbjct: 347 QRESAPKPRFSSSMKELASVDLVIEAVFEDMNLKKQVFAELSAVCKPEAFLCTNTSALDV 406
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488
+ + TS +IG HFFSPAHVM L+E++ + +S I +M + K +KK+ VVVGN
Sbjct: 407 DEIAASTSRPQLVIGTHFFSPAHVMKLVEVIPSRHSSPTTIATVMNLSKKMKKIAVVVGN 466
Query: 489 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
C GF NR PY L+ G ID A+ FGL +GP +
Sbjct: 467 CYGFVGNRMLQPYFNQTYFLLEDGSKPEDIDQALEEFGLKMGPLR 511
>gi|242010793|ref|XP_002426143.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Pediculus humanus
corporis]
gi|212510190|gb|EEB13405.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Pediculus humanus
corporis]
Length = 773
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 276/554 (49%), Gaps = 42/554 (7%)
Query: 13 DGVAIITLIN--PPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D V ++T+ N +N L ++ + + + ++VL +G F G DI++
Sbjct: 46 DDVYVVTIDNVGSKMNVLNNEVMEEFQSLIPAVQNDPSISSVVLISGKPNVFIAGADIDM 105
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
++ + S + ++ LIED KKP +AA++G LGGGLE+A+ CH R+A
Sbjct: 106 LAAAKTKEEIVQISK-SGQKILQLIEDSKKPFIAAIKGSCLGGGLEVALACHYRLAMMDK 164
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 185
T+LGLPE+ LG++PG GGTQR+P+LV L AIEM K + ++ K+GLID VV
Sbjct: 165 STKLGLPEIKLGLLPGAGGTQRMPKLVSLPNAIEMCSSGKEVRADRAKKMGLIDMVVKPL 224
Query: 186 ------SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-----------VLK 228
+ + A+ IA + SL R K G++ + + +
Sbjct: 225 GPGLKPANDRFSYLEEVAVFIAKKIASGEISLDRESKKGTIQKLTDSVMGIGFVKNLIFN 284
Query: 229 LARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
AR Q K T P L+VI++G V G EA+ F EL M S+GL+ +++
Sbjct: 285 KAREQITKATKGFYPAPLKALEVIKKG-VENPEEGFQAEAEAFGELAMTPQSKGLIGLYY 343
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347
+A K G + +AVIG GLMG+GIA + I V+K+VN L +G
Sbjct: 344 GMKACEK----NRFGAPQKEANSIAVIGSGLMGAGIAQVTVNKKIPCVMKDVNESGLQRG 399
Query: 348 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 407
+ I+ N V R +L+ L L L Y KDVD ++EAV E + +K K+
Sbjct: 400 LAQIQKNFATAVKRKQLSTMDRALYLSHLYPTLSYDRLKDVDCIVEAVFEDLNIKHKVIK 459
Query: 408 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467
E+E PPHC++ATNTS I ++ V E + + ++IG H+FSP M LLEI+ T++TS
Sbjct: 460 EIEAVVPPHCVIATNTSAIPISKVAEGSRNPSKVIGMHYFSPVDKMMLLEIIATKQTSKD 519
Query: 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL-----------GVDVF 516
+ VG KK+ +VVG+ GF R A L+ L GVDV
Sbjct: 520 TCAVAVDVGLRQKKLVIVVGDGPGFYTTRILSAMLAEALRLLQLKIIKFIFFLQEGVDVV 579
Query: 517 RIDSAIRSFGLPIG 530
+D FG P+G
Sbjct: 580 SLDKLTEKFGFPVG 593
>gi|442760387|gb|JAA72352.1| Putative hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase [Ixodes
ricinus]
Length = 762
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 279/547 (51%), Gaps = 39/547 (7%)
Query: 13 DGVAIITLINPP--VNALAIPIV----AGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
DGVA++ + +P VN+L ++ A LKD FE S A++++ G F G D
Sbjct: 44 DGVAVVRINSPDSRVNSLNAEVMEDMDAVLKD-FENNHSV--TSAVLISSKPGCFIAGAD 100
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I + KV S + ++V L D KPIVAA+ G LGGGLE+AM CH RIA
Sbjct: 101 ITMLDKVTSVSHASELSHEGQKMVQKLA-DSPKPIVAAIMGSCLGGGLEVAMACHYRIAV 159
Query: 127 P--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
KT LGLPE+ LG++PG GGTQRLP+L+ L A++MML ++I +++ K+GL+D V
Sbjct: 160 KERKTVLGLPEVMLGILPGAGGTQRLPKLIQLPTALDMMLTGRNIRADQAKKMGLVDQTV 219
Query: 185 T-----------------SEELLKVSRLWALDIAA--RRKPWIRSLHRTDKLGSLSEARE 225
E ++ ++ AL+ R +P + L +K S AR
Sbjct: 220 ELLGPGLKPMEDRMIEYLEEVAVEAAKGLALNTLTPNRTRPLMERL--MNKALSYEYARN 277
Query: 226 -VLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 283
V + A+ Q K + P L+V+ GI G +G E + F ELVM S+ L+
Sbjct: 278 YVFEKAKGQVMKMTQGLYPAPLKILEVVRTGIEKGPQAGYKAEHEGFGELVMTPQSKALI 337
Query: 284 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343
++F Q K G V+ V V+G GLMG+GIA + V+LK+ N +
Sbjct: 338 GLYFGQVTCKK----NRFGEPKNKVKTVGVLGAGLMGAGIAHVSVDKGYNVLLKDTNQKG 393
Query: 344 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 403
L +G + I+ + V + +L+ + + + L+ L Y F D+VIEAV E + +K
Sbjct: 394 LGRGEQQIQKGLSDAVKKKRLSAIEKDRFMSALEPTLKYDRFNQADIVIEAVFEDIGVKH 453
Query: 404 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463
+ E+E+ PPHC+ A+NTS I + + E + D+++G H+FSP M LLE++ T++
Sbjct: 454 AVLKEVEQHIPPHCVFASNTSAIPIAKIAEASKRPDKVVGLHYFSPVDKMQLLEVITTDK 513
Query: 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 523
TS + VG KV + V + GF R A ++ G V +DS +
Sbjct: 514 TSQDTAATAVDVGLKQGKVVITVKDAPGFYTTRILAAMMAEALRVLQEGTTVKELDSLTK 573
Query: 524 SFGLPIG 530
FG P+G
Sbjct: 574 KFGFPVG 580
>gi|411009212|ref|ZP_11385541.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas aquariorum AAK1]
Length = 707
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 289/547 (52%), Gaps = 29/547 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVDEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGS---LSEARE 225
KLGL+D VV LL+ A+ +A + KP R L T+KLG +AR+
Sbjct: 180 KLGLVDDVVPPSILLEA----AIKLAKKGKPRHELKRDLQGKLLETNKLGRKVLFDQARK 235
Query: 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 285
+K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +
Sbjct: 236 GVK------AKTRGNYPAPELILEVVRIGVEEGMQAGLAAESRHFGELVMTSESAALRSI 289
Query: 286 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYL 344
FFA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 290 FFATTEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGI 347
Query: 345 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404
++ + + R + + + + +L G LDYS F VDMV+EAV E + LK +
Sbjct: 348 GNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLNLKHQ 407
Query: 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464
+ ++E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ T
Sbjct: 408 MVKDVERECGEHTVFASNTSSLPIHQIASAAAHPERVVGLHYFSPVDKMPLAEIIPHAGT 467
Query: 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 524
SA+ + + + K P+VV + GF VNR PY A LV G V +D A+
Sbjct: 468 SAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLD 527
Query: 525 FGLPIGP 531
FG P+GP
Sbjct: 528 FGFPVGP 534
>gi|410639327|ref|ZP_11349876.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410141115|dbj|GAC08063.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 716
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 291/542 (53%), Gaps = 26/542 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 16 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 73
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 74 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 132
Query: 122 ARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
R+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 133 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 192
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE-----AREVLKLARLQA 234
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 193 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGKKLMFKQARKQT 247
Query: 235 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 248 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 307
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 352
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 308 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 365
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 366 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVTDVETH 425
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 426 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 485
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 486 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 544
Query: 532 FQ 533
+
Sbjct: 545 IK 546
>gi|407789605|ref|ZP_11136705.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
gi|407206265|gb|EKE76223.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
Length = 717
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 273/536 (50%), Gaps = 26/536 (4%)
Query: 12 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
DG+ IIT+ P +N L ++ + VK +VL +G G F G DI
Sbjct: 12 EDGIGIITMDVPGESMNTLKAAFAEEIRAILADIRHDPAVKGLVLVSGKQGSFIAGADIG 71
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP- 127
+ K + D + + L E K P++AA+ G LGGGLELAM CH R+A+
Sbjct: 72 MLDKCESSQDAEALSKAGHAICAEL-ESLKVPLIAAIHGPCLGGGLELAMACHGRVASDW 130
Query: 128 -KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
KT LGLPE+ LG++PG GGTQRLPRLVG+ KA++MML K + + K GL+D VV
Sbjct: 131 DKTALGLPEVQLGLLPGSGGTQRLPRLVGIQKALDMMLTGKQLRPAQAKKAGLVDEVVPQ 190
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--------VLKLARLQA-KKT 237
LL V A+ +A + KP L KLG + E V AR KKT
Sbjct: 191 SILLDV----AIGLAKKGKP----LRDGVKLGFKDKLLEDNGVGRNIVFDQARKTVLKKT 242
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
+ P L+ + G+ G +G+ EAK F ELV S+ L +FFA K
Sbjct: 243 GGHYPAPLKILECVRVGMTDGMDAGLAVEAKYFGELVKTPESKQLRGLFFATTQMKKETG 302
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVR 356
G+ PR V K AV+GGGLMG GIA + + V +K++ + + K +
Sbjct: 303 AE--GVTPRKVAKAAVLGGGLMGGGIANVTVTKAGVPVRIKDIGEQGISHAFKYSYDLLM 360
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V R L + +A + ML G Y F DVD+V+EAV E + LK ++ ++E C P
Sbjct: 361 KKVKRRHLRKSQAQKQMMMLTGDTQYRGFHDVDIVVEAVFEDLALKHQMVKDIETHCGPE 420
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
I A+NTS++ + + E + +IG H+FSP MPL EI+ ++TS Q I +
Sbjct: 421 TIFASNTSSLPIGQIAEAAQRPENVIGLHYFSPVDKMPLAEIIAHDKTSPQTIATTVAFA 480
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
+ K P+VV + GF VNR Y A L+ G V ++D A+ +FG+P+GP
Sbjct: 481 RRQGKTPIVVKDGAGFYVNRILGLYMNEAAYLLMEGEPVEKLDKALTAFGMPVGPM 536
>gi|332307025|ref|YP_004434876.1| fatty acid oxidation complex subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
gi|332174354|gb|AEE23608.1| fatty acid oxidation complex, alpha subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
Length = 717
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 291/542 (53%), Gaps = 26/542 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 17 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 74
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 75 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 133
Query: 122 ARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
R+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 134 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 193
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLARLQA 234
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 194 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGRKLMFKQARKQT 248
Query: 235 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 249 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 308
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 352
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 309 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 366
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 367 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVADVETH 426
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 427 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 486
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 487 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 545
Query: 532 FQ 533
+
Sbjct: 546 IK 547
>gi|126729409|ref|ZP_01745223.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Sagittula
stellata E-37]
gi|126710399|gb|EBA09451.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Sagittula
stellata E-37]
Length = 688
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 272/531 (51%), Gaps = 48/531 (9%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
I+TL NPPVNA+ + + GL A + + + +VLTG G F+ G D F
Sbjct: 13 IVTLDNPPVNAIVLAVREGLVAALARAGTEEGLSRVVLTGAGRAFAAGGDAREFDA---- 68
Query: 77 GDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
P V+ L VV IE C+ P VAA+ G+ALGGG ELA+ C RIAAP Q+GLP
Sbjct: 69 ------PAVAPHLNDVVAGIEACEVPWVAAINGVALGGGCELALACRYRIAAPGVQIGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+TLGV+PG GGTQRLPRL+G++ A+E++ K + +E LGL+D V + +
Sbjct: 123 EVTLGVVPGAGGTQRLPRLIGMAAALELIPTGKPVNAERAEALGLVDGVAVDPLAVALG- 181
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKL---------ARLQAKKTAPNMPQHQ 245
LD+ G+L+ A V L A MPQ
Sbjct: 182 ---LDV-----------------GTLALAAPVCDLPVPEMDAEAVEAAQALAAKKMPQQV 221
Query: 246 ACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
A L I + G+ +E + F L +R L HVFFA+R +K P +
Sbjct: 222 APLTAIALIASTPAVTLAEGLAEERRAFLTLRTDSQARALRHVFFAERG-AKAPRWLEDA 280
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
P VAV+GGG MG+GIA A + + V L E ++ + + + + V + RG
Sbjct: 281 --PGDTGHVAVVGGGTMGAGIAYACLNAGLRVTLLETGADGVTRAEENVGRIVDASLKRG 338
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+++ A L DY+ + + IEA ES+ +K++IF L+ A P +LATN
Sbjct: 339 LISEAGAKERRARLAVASDYAAAEGAGLAIEAAFESMDVKREIFGRLQAALSPDAVLATN 398
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + R++G HFF+PAH+M LLEIV+ E TS + + + K ++KV
Sbjct: 399 TSYLDIDEIARSVDDPARVVGLHFFAPAHIMKLLEIVKGEATSDRALASGFALAKTLRKV 458
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PV+ G C GF NR Y ++A ++ G + ID A+ +FG +GP++
Sbjct: 459 PVLAGVCDGFIGNRILARYREAADTVLMDGSTPWEIDEAMVAFGYAMGPYE 509
>gi|108760112|ref|YP_633521.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus xanthus DK 1622]
gi|108463992|gb|ABF89177.1| fatty oxidation complex, alpha subunit FadJ [Myxococcus xanthus DK
1622]
Length = 746
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 197/559 (35%), Positives = 287/559 (51%), Gaps = 47/559 (8%)
Query: 14 GVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGGFDINVF 70
GVA+IT P PVN L+ A +VKA+V T G F G I+
Sbjct: 21 GVAVITFDLPDSPVNTLSPETGEAFLRVMMRAEREPEVKAVVFTSGKKDSFVAGAKIDFL 80
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--APK 128
Q + A + + + E + + D KP+VAA+ G LGGGLE A+ C RIA +PK
Sbjct: 81 QTIKTAEEATAISRNGQE-GFDKLADFPKPVVAAIHGACLGGGLEWALACDYRIATDSPK 139
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
T LGLPE+ LG+IPG GGTQRLP L+G+ A++++L KS+ + KLG++D VV +
Sbjct: 140 TSLGLPEVQLGLIPGAGGTQRLPALIGVQAALDLILTGKSLKPAKAKKLGVVDEVVPTPI 199
Query: 189 LLKVSRLWALDIA---------------------------------ARRKPWIRSLHRTD 215
L ++ L A ++A A ++ W +
Sbjct: 200 LRAIAVLRAKELADGKLKVDRRHGQGFKGVAANGKAKGLAGFIQGLANKELWAEVALEDN 259
Query: 216 KLGSLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 273
LG R+VL AR Q KKT P + L V+ G+ G +G EAK F EL
Sbjct: 260 PLG-----RKVLFDQARKQLLKKTRGKFPAPEKALQVVRVGLESGHKAGQEAEAKAFGEL 314
Query: 274 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNI 332
V+ D S+ LV +FFA A K ++ KPR V+KVAV+GGGLMG GIA +L +
Sbjct: 315 VVSDVSKRLVEIFFATTALKKENGTSNPDAKPREVKKVAVLGGGLMGGGIAYVTSVLQGV 374
Query: 333 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 392
V +K+ + + + +K +++ + V R LT+ +A ++ DYS FK D+VI
Sbjct: 375 PVRVKDKDDAGVGRAMKQVQSILDERVKRRSLTRREATAKSALVTAGTDYSGFKSADLVI 434
Query: 393 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 452
EAV E + LK +I +E+E I A+NTS+I + + + + ++IG H+FSP H
Sbjct: 435 EAVFEDLKLKHRIIAEVEAVTGDQTIFASNTSSIPITELAKGSRRPAQVIGMHYFSPVHK 494
Query: 453 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 512
MPLLEI+ T+ V + VG+ K +VV + GF +R PY A L++ G
Sbjct: 495 MPLLEIITHAGTADWVTATCVEVGRKQGKTVIVVNDGPGFYTSRILAPYMNEAAYLLAEG 554
Query: 513 VDVFRIDSAIRSFGLPIGP 531
D+ +D A+ FG P+GP
Sbjct: 555 ADIAELDRALVEFGFPVGP 573
>gi|149633065|ref|XP_001508292.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
[Ornithorhynchus anatinus]
Length = 763
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 264/501 (52%), Gaps = 26/501 (5%)
Query: 51 AIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110
A++++ G F G D+N+ +V+ + +++ L E KPIVAA+ G L
Sbjct: 88 AVLISAKPGCFIAGADLNMLADCKSPQEVTQLSQEGQQMLEKL-EKSPKPIVAAISGSCL 146
Query: 111 GGGLELAMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKS 168
GGGLELA+ C RIA KT LG+PE+ LG++PG GGTQRLP++VG+ A +MML ++
Sbjct: 147 GGGLELAIACQYRIATKDKKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRN 206
Query: 169 ITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTD 215
I ++ K+GL+D +V T E L +V+ +A D+A ++ ++ +
Sbjct: 207 IRADRAKKMGLVDQLVEPLGPGLKAPEERTIEYLEEVAVTFAKDLADKKVSAKKNKSLVE 266
Query: 216 KLGSLSEA-----REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKV 269
K+ S + +++ K + +K + P +DV++ G+ G +G L E++
Sbjct: 267 KVTSYAMTIPFVRQQIYKTVEEKVRKQTKGLYPAPLKIIDVVKTGLEEGNDAGYLSESQK 326
Query: 270 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 329
F EL+M + S+ LV ++ Q K G + V+ +A++G GLMG+GIA +
Sbjct: 327 FGELIMTNESKALVGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVD 382
Query: 330 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389
+ +LK+ L +G + + + V + LT + ++ L G LDY F+ D
Sbjct: 383 KGLKTILKDTTLTGLGRGQQQVFKGLNDKVKKKNLTSFERDSIFSTLTGQLDYQGFEKAD 442
Query: 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 449
MVIEAV E + +K K+ E+E P HC+ A+NTS + +N + + +++IG H+FSP
Sbjct: 443 MVIEAVFEDLNIKHKVLKEVEAVIPAHCVFASNTSALPINEIAAVSKRPEKVIGMHYFSP 502
Query: 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 509
M LLEI+ TE+TS + VG KV +VV + GF R P +
Sbjct: 503 VDKMQLLEIITTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVVRAL 562
Query: 510 SLGVDVFRIDSAIRSFGLPIG 530
GV+ ++DS SFG P+G
Sbjct: 563 QEGVEPKKLDSLTTSFGFPVG 583
>gi|117620841|ref|YP_856678.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117562248|gb|ABK39196.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 715
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 288/547 (52%), Gaps = 29/547 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVEEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGS---LSEARE 225
KLGL+D VV LL A+ +A + KP R L T+KLG +AR+
Sbjct: 180 KLGLVDDVVPPSILLDA----AIKLAKKGKPRHELKRDLQGKLLETNKLGRKVLFDQARK 235
Query: 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 285
+K KT N P L+V+ G+ G +G+ E++ F ELVM S L +
Sbjct: 236 GVK------AKTRGNYPAPDLILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSI 289
Query: 286 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYL 344
FFA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 290 FFATTEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASSGI 347
Query: 345 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404
++ + + R +L + + + +L G LDYS F VDMV+EAV E + LK +
Sbjct: 348 GNAMRYSYDILAKKLKRRQLLRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLSLKHQ 407
Query: 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464
+ ++E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ T
Sbjct: 408 MVKDVERECGEHTVFASNTSSLPIHQIASVAAHPERVVGLHYFSPVDKMPLAEIIPHAGT 467
Query: 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 524
SA+ + + + K P+VV + GF VNR PY A LV G V +D A+
Sbjct: 468 SAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLD 527
Query: 525 FGLPIGP 531
FG P+GP
Sbjct: 528 FGFPVGP 534
>gi|423196749|ref|ZP_17183332.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
SSU]
gi|404632203|gb|EKB28832.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
SSU]
Length = 707
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 289/547 (52%), Gaps = 29/547 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVDEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGS---LSEARE 225
KLGL+D VV +L+ A+ +A + KP R L T+KLG +AR+
Sbjct: 180 KLGLVDDVVPPSIMLEA----AIKLAKKGKPRHELKRDLQGKLLETNKLGRKVLFDQARK 235
Query: 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 285
+K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +
Sbjct: 236 GVK------AKTRGNYPAPELILEVVRIGVEEGMQAGLAAESRHFGELVMTSESAALRSI 289
Query: 286 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYL 344
FFA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 290 FFATTEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGI 347
Query: 345 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404
++ + + R + + + + +L G LDYS F VDMV+EAV E + LK +
Sbjct: 348 GNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQ 407
Query: 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464
+ ++E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ T
Sbjct: 408 MVQDVERECGEHTVFASNTSSLPIHQIASAAAHPERVVGLHYFSPVDKMPLAEIIPHAGT 467
Query: 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 524
SA+ + + + K P+VV + GF VNR PY A LV G V +D A+
Sbjct: 468 SAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLD 527
Query: 525 FGLPIGP 531
FG P+GP
Sbjct: 528 FGFPVGP 534
>gi|56460101|ref|YP_155382.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina loihiensis L2TR]
gi|81600096|sp|Q5QXM1.1|FADJ_IDILO RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|56179111|gb|AAV81833.1| Fatty oxidation complex, alpha subunit [Idiomarina loihiensis L2TR]
Length = 708
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 289/541 (53%), Gaps = 28/541 (5%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEAT--------SRDDVKAIV-LTGN 57
TMEV +DGVA+IT I+ P ++ LKD F E S D VK +V ++G
Sbjct: 8 TMEVRDDGVAVIT-IDVPGESMNT-----LKDSFAEEVGSLMNRLESDDSVKGVVFISGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ A D + + + + IE P+VAA+ G LGGGLELA
Sbjct: 62 PGSFIAGADINMIDGCENAVDAESLARKG-QAMFDRIEQLNVPVVAAINGACLGGGLELA 120
Query: 118 MGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
M CH R+ KT LGLPE+ LG++PG GGTQRLP LVG+ + + M+L K + +++
Sbjct: 121 MACHVRVCTDNSKTALGLPEVKLGLLPGSGGTQRLPELVGVQQGLTMILTGKELRAKQAL 180
Query: 176 KLGLIDAVVTSEELLKVSRLWALDIAARR-KPWIRSLHRTDKLGSLSEAREVL-KLARLQ 233
K GL+ VV LL V+ AL + KP ++ + + L + R+++ K A Q
Sbjct: 181 KAGLVTEVVPQSILLDVAVEHALKRKPKSTKPPLKGISKV--LEATKFGRDIIFKKASEQ 238
Query: 234 AKKTAP-NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292
A+K A N P + + EG+ G +G+ KEA+ F EL M S L +FFA
Sbjct: 239 AQKKAQGNYPAIDKIIQTVREGVERGREAGLDKEARSFGELAMTPESYQLRQIFFATTEM 298
Query: 293 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTI 351
K G+KP V++V V+GGGLMG GIA I +K++ + + +
Sbjct: 299 KKETGAD--GVKPDSVKRVGVLGGGLMGGGIAYVTAAKAGIPARIKDIAEDGIRHALHYS 356
Query: 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 411
+ V R + + + + ML G LDYS F+ D+VIEAV E + LKQK+ +++E+
Sbjct: 357 YERLDKKVKRRHMRRAELEKTMLMLSGSLDYSGFERTDVVIEAVFEDLNLKQKMVADVEE 416
Query: 412 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 471
I ATNTS++ + + K +++IG H+FSP MPL EI+ TS + I
Sbjct: 417 HADESTIFATNTSSLPITQIAAKAKRPEQVIGLHYFSPVDKMPLAEIITHPGTSDKTIAT 476
Query: 472 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIG 530
+++ K K P+VV + GF VNR PY +++ARLL++ G + ID + FG P+G
Sbjct: 477 TVSLAKKQGKTPIVVKDGAGFYVNRILAPYMNEAARLLLA-GEPIEHIDKTLVKFGFPVG 535
Query: 531 P 531
P
Sbjct: 536 P 536
>gi|410645454|ref|ZP_11355917.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410134965|dbj|GAC04316.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
Length = 716
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 291/542 (53%), Gaps = 26/542 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 16 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 73
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 74 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 132
Query: 122 ARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
R+ + KTQLGLPE+ LG++PG GGTQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 133 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 192
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLARLQA 234
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 193 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGRKLMFKQARKQT 247
Query: 235 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 248 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 307
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 352
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 308 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 365
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 366 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVADVETH 425
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 426 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 485
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 486 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 544
Query: 532 FQ 533
+
Sbjct: 545 IK 546
>gi|291387083|ref|XP_002709860.1| PREDICTED: mitochondrial trifunctional protein, alpha subunit
[Oryctolagus cuniculus]
Length = 763
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 279/551 (50%), Gaps = 30/551 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + + + E + D ++ A++++ G
Sbjct: 38 RTHVNYGVKGDVAVIRINSPNSKVNTLNKELQSEFIEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ + + + ++ L E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FVAGADINMLAACKTPQEAAQVSQEGQKMFEKL-EKSTKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
RIA KT LG+PE+ LG++PG GGTQRLP++VG+ A +MML +SI ++ K+G
Sbjct: 157 QYRIAIKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRSIRADRAKKMG 216
Query: 179 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 223
L+D +V T E L +V+ +A +A ++ R+ +KL S +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAVSFAKGLADKKISSKRNKGLMEKLTSYAMTIP 276
Query: 224 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 279
+++ K Q +K + P +DV++ GI G +G L E++ F EL M S
Sbjct: 277 FVRQQIYKKVEEQVQKQTKGLYPAPLKIIDVVKTGIEQGNDAGYLAESQKFGELAMTKES 336
Query: 280 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 339
+ L+ ++ Q K G + V+++A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKEVKQLAILGAGLMGAGIAQVSVDKGLNTILKDA 392
Query: 340 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 399
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQNFEKADMVIEAVFEDL 452
Query: 400 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 459
LK K+ E+E P HC+ A+NTS + +N + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHKVLKEVEAVIPDHCVFASNTSALPINEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 519
T++TS + VG KV VVV + GF R P ++ GV ++D
Sbjct: 513 TTQKTSKDTTASAVAVGLKQGKVIVVVKDGPGFYTTRCLAPMMSEVIRILQEGVGPKKLD 572
Query: 520 SAIRSFGLPIG 530
S SFG P+G
Sbjct: 573 SLTTSFGFPVG 583
>gi|329998416|ref|ZP_08303100.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|365137258|ref|ZP_09343978.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|419764099|ref|ZP_14290339.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|328538691|gb|EGF64784.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|363656270|gb|EHL95034.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|397742682|gb|EJK89900.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 714
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 282/534 (52%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPGAE- 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 --AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|398790469|ref|ZP_10551489.1| fatty oxidation complex, alpha subunit FadJ [Pantoea sp. YR343]
gi|398218591|gb|EJN05094.1| fatty oxidation complex, alpha subunit FadJ [Pantoea sp. YR343]
Length = 709
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 282/529 (53%), Gaps = 16/529 (3%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D V +IT+ P +N L V +K +EA S D+ +VL +G F G DI++
Sbjct: 13 DHVGVITIDVPGEKMNTLKDEFVPQIKAVLDEARSHQDLAGLVLISGKPDNFVAGADISM 72
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
A + + + V+ +I P+VAA+ G LGGGLELA+ C ARI +
Sbjct: 73 IASCKTAEEAEALAKQGQD-VMAMIAALPFPVVAAIHGACLGGGLELALACDARICSLDD 131
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT+LGLPE+ LG++PG GGTQRLPRL+GL +A+ ++L K + +++ KLG++D V
Sbjct: 132 KTRLGLPEVQLGLLPGSGGTQRLPRLIGLQQALPLILTGKQLRAKQALKLGIVDDAVPQS 191
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQA-KKTAPNMPQHQ 245
LL+ A+ + K R L R D+L AR+VL LA+ Q KT N P
Sbjct: 192 ILLET----AIARVHKGKGARRELSRRDRLLQGPIARQVLFSLAQRQTHSKTQGNYPAAD 247
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
L+V+ G+ G +G EA+ F +L M S L +FFA A K + ++P
Sbjct: 248 RILEVVRIGLEQGSSAGHEAEARAFGQLAMTPESAALRSLFFASTALKKESMAS---VEP 304
Query: 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ ++++ V+GGGLMG GIA+ L + V +K++N + ++ + V R +L
Sbjct: 305 QALKQIGVLGGGLMGGGIASVTALKAGLPVRIKDINLNGVNHALQYSWDLLSNKVKRRQL 364
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+ + + G +DY F D+VIEAV E + LKQ++ SE+E C PH I A+NTS
Sbjct: 365 KAAERQQQMARISGGIDYQGFSQRDLVIEAVFEDLALKQQMVSEIESHCQPHTIFASNTS 424
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++ + + + IIG H+FSP MPL+E++ TSAQ + + + + + K V
Sbjct: 425 SLPIADIAAHAQRPENIIGLHYFSPVDKMPLVEVIPHANTSAQTLANTVQLARQQGKTAV 484
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VV + GF VNR PY A + G + ID A+ FG P+GP Q
Sbjct: 485 VVADRPGFYVNRILAPYINEAMHCLQEGEPIEHIDRALVKFGFPVGPLQ 533
>gi|386035884|ref|YP_005955797.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|424831674|ref|ZP_18256402.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|339763012|gb|AEJ99232.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|414709109|emb|CCN30813.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
Length = 714
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSQQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|302125403|gb|ADK93988.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase-like protein
[Sphingopyxis macrogoltabida]
Length = 695
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 276/521 (52%), Gaps = 19/521 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++T+ NPPVNAL + AGL +A + V+A+V+ G F G DI+ F K
Sbjct: 21 DGVAVLTIANPPVNALGAALRAGLAGAVTQAGADPSVEAVVVAAEGKVFIAGADISEFGK 80
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ ++ IE + P+VAA+ G ALGGGLELA+ CHAR+A +LG
Sbjct: 81 PPVP--------PVLPDLLEQIEAMEIPVVAAIGGTALGGGLELALACHARVAKSGAKLG 132
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
LPE+ LG+IPG GGTQRLPRL+G + A+++M+ + +T+ GL DAV + L +
Sbjct: 133 LPEVKLGLIPGAGGTQRLPRLIGAAAALKLMIDGEPVTAGGTAPSGLTDAVCEGDPLEQA 192
Query: 193 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 252
IA R L R+ + E + A K+ A + P AC++ +
Sbjct: 193 -------IAMARSLAQSGLRRSRDADAQGAREEFEETAAALLKRNAGH-PSVAACVEAVR 244
Query: 253 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR-ATSKVPNVTDIGLKPRGVRKV 311
G KE F LV S+ L +VFFA+R A V D +PR + +
Sbjct: 245 ATFDLPFAEGQAKERAAFLSLVEDTRSKALRYVFFAERRAVRPVGAAADA--QPRSIDRA 302
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
A+IGGG MG GIA I V + E + L +G++ I N V RG L++D +
Sbjct: 303 AIIGGGTMGGGIAMCFANAGIPVTIIETGQDGLDRGLQRIAKNYDISVKRGSLSEDARDA 362
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
LK++ G LD + D+VIEAV E + LK+ IF L + ILATNTS +D+N +
Sbjct: 363 RLKLIHGSLDMESTGEADIVIEAVFEDMALKKDIFGRLGQLTKAGTILATNTSYLDVNEI 422
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
+ + ++G HFFSPA+VM LLE+VR E T V+ M +G ++ K+PV+VG C G
Sbjct: 423 ANASGRPEDVLGLHFFSPANVMRLLEVVRGEATDPAVLATAMKLGSVLGKLPVMVGVCHG 482
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
F NR + A L+ G +D A+ +FG +GPF
Sbjct: 483 FVGNRMLAVRNAQAEQLLLEGALPQNVDRALTAFGFRMGPF 523
>gi|378979951|ref|YP_005228092.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|419972673|ref|ZP_14488100.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419977648|ref|ZP_14492947.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419983236|ref|ZP_14498387.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419989515|ref|ZP_14504491.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419995553|ref|ZP_14510359.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420001534|ref|ZP_14516189.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420006561|ref|ZP_14521058.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420012382|ref|ZP_14526696.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420018001|ref|ZP_14532199.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420023911|ref|ZP_14537926.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420037127|ref|ZP_14550783.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420041073|ref|ZP_14554571.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420046835|ref|ZP_14560154.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420052545|ref|ZP_14565726.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420075319|ref|ZP_14587795.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420083673|ref|ZP_14595950.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421909639|ref|ZP_16339449.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421916972|ref|ZP_16346536.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424932422|ref|ZP_18350794.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|428150563|ref|ZP_18998332.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428940462|ref|ZP_19013545.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae VA360]
gi|364519362|gb|AEW62490.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397350070|gb|EJJ43160.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397353989|gb|EJJ47056.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397355407|gb|EJJ48406.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397367320|gb|EJJ59932.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397369638|gb|EJJ62238.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397371858|gb|EJJ64366.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397382271|gb|EJJ74434.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397386224|gb|EJJ78310.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397390716|gb|EJJ82614.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397400147|gb|EJJ91793.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397405790|gb|EJJ97236.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397418608|gb|EJK09766.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397419391|gb|EJK10540.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397425447|gb|EJK16326.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397448412|gb|EJK38586.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397451003|gb|EJK41096.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|407806609|gb|EKF77860.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410116541|emb|CCM82074.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410120689|emb|CCM89161.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426302261|gb|EKV64470.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae VA360]
gi|427539428|emb|CCM94470.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVCADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|420072135|ref|ZP_14584775.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397439352|gb|EJK29799.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
Length = 556
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVCADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|307196024|gb|EFN77749.1| Trifunctional enzyme subunit alpha, mitochondrial [Harpegnathos
saltator]
Length = 740
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 278/543 (51%), Gaps = 30/543 (5%)
Query: 13 DGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA+IT+ +P V N L ++ +K E S V ++VL +G F G DI V
Sbjct: 23 DDVAVITMDSPGVKMNTLHKEVMEEIKGLLTEIQSNSLVNSVVLISGKPDNFIAGADIKV 82
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
+ + M ++N+I KPIVAA++G LGGGLE+A+ CH R+A +
Sbjct: 83 LENLTDVESSYQMVKEGAH-ILNMIAQSSKPIVAAIQGSCLGGGLEVALACHYRVAVNSK 141
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 185
KT LGLPE+ LG++PG GGTQRLP++V L A++MML + I ++ KLGL+D +V
Sbjct: 142 KTSLGLPEVMLGLLPGGGGTQRLPKVVSLPTALDMMLTGRMIKADRAKKLGLVDMIVNRL 201
Query: 186 ---------------SEELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSEAR-EVLK 228
E +K ++ L + + A R P T ++ SL+ + ++ K
Sbjct: 202 GPGISTPEQNTLRYLEENAVKAAKDLASGKLKAERDPKTIIGKITQQVLSLNFVKDQIFK 261
Query: 229 LARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
A+ Q K + P L+VI G+ G +G EAK F EL + S+GL+ +FF
Sbjct: 262 RAKAQVMKVTGGLYPAPLKILEVIRVGLDKGPIAGFEAEAKGFSELTVTPESKGLISLFF 321
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347
Q A K G +KVAV+G GLMG+GI I VV+K+ N L +G
Sbjct: 322 GQTACKK----NRFGSATNAPKKVAVVGAGLMGAGIVQVSIDKGYSVVMKDTNENGLYRG 377
Query: 348 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 407
I I+ + V R +++ + + L L L Y FK+ D+VIEAV E + +K K+
Sbjct: 378 INQIQQGLNAAVKRKRISIVEKDKYLSQLDTTLSYDSFKNADVVIEAVFEDINIKHKVLK 437
Query: 408 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467
E+E P HC++ATNTS I + + +S D++IG H+FSP M LLEI+ + TS +
Sbjct: 438 EIESVVPNHCVIATNTSAIPITKIAAGSSRPDKVIGMHYFSPVDKMQLLEIITHKGTSEE 497
Query: 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 527
+ VG K + VG+ GF R A L+ GVD +D + FG
Sbjct: 498 TTKVAVDVGLKQGKTVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDPMDLDQLTKKFGF 557
Query: 528 PIG 530
P+G
Sbjct: 558 PVG 560
>gi|262043383|ref|ZP_06016509.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039264|gb|EEW40409.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 285/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K+P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKMPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|152971261|ref|YP_001336370.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|166972673|sp|A6TC19.1|FADJ_KLEP7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|150956110|gb|ABR78140.1| bifunctional fatty acid oxidation complex protein: putative
enoyl-CoA hydratase/isomerase/putative NAD(P)-binding
dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 282/534 (52%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPGAE- 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 --AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEMIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|410637470|ref|ZP_11348050.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
gi|410143093|dbj|GAC15255.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
Length = 717
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 289/537 (53%), Gaps = 20/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T++V ++GVAI+++ P +N L + + +E S + +K +V ++G F
Sbjct: 18 TLDVHDNGVAILSMDVPGESMNTLKMEFAEQISAMLDEIESNNKIKGVVVISGKDSSFVA 77
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A DV + + + IE+ + VAA+ G ALGGGLELA+ CH+R
Sbjct: 78 GADISMLASCETAQDVEAI-STGGQQIFQRIENMQAHFVAAIHGPALGGGLELALACHSR 136
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I KTQ+GLPE+ LG++PG GGTQRLPRL+G+ +A++MML + +++ K G++D
Sbjct: 137 ICTDDKKTQMGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPVRAKQALKYGIVD 196
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLARLQA-K 235
+V L+ V+ A + KP +L +G E + K AR Q
Sbjct: 197 DMVPRSILMDVAIELAQKPKPQPKPVKLNL-----MGQFLEKTPIGRNTMFKQARKQTLS 251
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + +D IE GI G G+ EAK F LVM S L ++FFA K
Sbjct: 252 KTKGNYPAPELIIDCIETGIDKGIQEGMSVEAKNFAYLVMTPESEQLRNIFFATTEMKKE 311
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
VT G++P ++KV ++GGGLMG GIA + +K++ SE + +K
Sbjct: 312 TGVT--GVEPGQLKKVGILGGGLMGGGIAFVTATKAGLPARIKDIRSEGIANAMKYSFDL 369
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ V R + + + + +L G +DYS F D D+VIEAV E + LKQ + ++E C
Sbjct: 370 LNKKVKRRFIPKSEMQKQMSLLTGSIDYSGFGDADVVIEAVFEDLELKQSMVHDVETHCN 429
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
+ I A+NTS+I + + EK + +++IG H+FSP MPL E++ ++TS + I +
Sbjct: 430 ENTIFASNTSSIPIGQIAEKAARPEQVIGLHYFSPVDKMPLAEVIAHDKTSDKTISTTVE 489
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K P+VV + GF VNR PY A ++ G + ID ++ FG P+GP
Sbjct: 490 LARKQGKTPIVVKDGAGFYVNRILAPYMNEAANILLAGEPIEHIDRSLVKFGFPVGP 546
>gi|425082566|ref|ZP_18485663.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936275|ref|ZP_19009694.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
gi|405600818|gb|EKB73983.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298678|gb|EKV61066.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVSVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|254447502|ref|ZP_05060968.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
gi|198262845|gb|EDY87124.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
Length = 714
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 294/540 (54%), Gaps = 23/540 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGRFSG 63
++EV NDGVAI+TL P +N L ++ + VKA + ++G F
Sbjct: 8 SVEVRNDGVAIVTLDVPGESMNVLNASFADEAYAVLDQVENDPKVKASVFISGKDSGFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + Q AG + + V +L + D KKPI+AA+ G ALGGG ELA+ CH R
Sbjct: 68 GADVKMLQATTSAGGAAHIARVG-QLTFQKMADSKKPIIAAIHGPALGGGYELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ KT +GLPE+ LGV+PG GGTQRLPRL+GL +A+ ++L K + + +G K G++D
Sbjct: 127 VASDSRKTVVGLPEVMLGVLPGSGGTQRLPRLIGLQQALPLILQGKQVKAFKGVKKGMVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQAKK---- 236
VV E+LL + AL + + P RS + D L E + K+ QA+K
Sbjct: 187 KVVPKEQLLDTAIEMALGMVGKVDPN-RSAAKKDIKDRLLEDNPIGRKVVFDQARKMVKA 245
Query: 237 -TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
T N P A +D IE G+ +G G++ E+K F EL M +R L+ VFF + ++
Sbjct: 246 QTKGNYPAPLAIIDCIEYGLNNGLEKGLVYESKRFGELAMTKVARNLMRVFFTDQELAR- 304
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ T G K +++V V+GGGLMG+GI T + N V+ + E KGI ++
Sbjct: 305 HDFT--GSKGADIQQVGVLGGGLMGAGIGTVSLFNAKKSVIIKDRDE---KGIGNANQHI 359
Query: 356 RGLVTRG----KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 411
+ + +T+ + L +GV++Y KD D+++EAV E++ LK ++ ++E
Sbjct: 360 KDAADKKLKFQGITEQEHRELLSKYQGVIEYEPLKDCDIIVEAVFENLELKHQMIQDVEA 419
Query: 412 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 471
C + ATNTS++ L + ++++ H+FSP MPLLEIV+ ++T+ V+
Sbjct: 420 NCKDDVVFATNTSSLPLKDIAAAAKRPEQVVAMHYFSPVEKMPLLEIVKHDKTADWVVST 479
Query: 472 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ +G+ K +VV + GF VNR FPY+ + GV + ++D A+ G P+GP
Sbjct: 480 AVDLGRAQGKKVIVVKDGAGFYVNRMLFPYANEIAWMAMEGVPLDQLDKAMVKAGFPVGP 539
>gi|425075588|ref|ZP_18478691.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425086224|ref|ZP_18489317.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|449060359|ref|ZP_21738019.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
gi|405593988|gb|EKB67411.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405605139|gb|EKB78205.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|448873926|gb|EMB08993.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
Length = 714
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|323499534|ref|ZP_08104504.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sinaloensis DSM 21326]
gi|323315407|gb|EGA68448.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sinaloensis DSM 21326]
Length = 707
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 270/477 (56%), Gaps = 11/477 (2%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FVAGADVRMLDACTTTAEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R+ + KT+LGLPE+ LG++PG GGTQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 179 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 236
++DAVV LL V++ + ++K ++ + + + R+V+ + A+ +K
Sbjct: 185 VVDAVVPDTILLDVAKSLIDKHSGKKKAKRQASTKEKLIANTGLGRKVIFEQAAKKTHEK 244
Query: 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFAELVMTPESKALRSIFFA---TTEMK 301
Query: 297 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 355
P+ V++ AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KENGADADPKQVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
R +++ + + + L G +D++ F D+VIEAV E + LKQ + +++E+
Sbjct: 362 ETQRKRRIISKAQLQSKMLQLSGGIDFTNFNHTDIVIEAVFEDLELKQTMVADIEENAKE 421
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
I ATNTS++ + + EK + ++G H+FSP MPL+E++ E TS + + ++
Sbjct: 422 STIFATNTSSLPIAQIAEKAKRPENVVGLHYFSPVEKMPLVEVIPHEGTSEEAVSTVVEF 481
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K P+VV + GF VNR PY ++SA++L+S G + +D+A+ +FG P+GP
Sbjct: 482 ARKQGKTPIVVKDSAGFYVNRILAPYMNESAQILMS-GEPIGHLDNALLNFGFPVGP 537
>gi|432096823|gb|ELK27401.1| Trifunctional enzyme subunit alpha, mitochondrial [Myotis davidii]
Length = 763
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 276/543 (50%), Gaps = 29/543 (5%)
Query: 12 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDIN 68
+ VA+I + +P VN L + A + E + D V+ A++++ G F G DIN
Sbjct: 47 KEDVAVIRINSPNSKVNTLNKELQAEFIEVMNEIWASDQVRSAVLISSKPGCFIAGADIN 106
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP- 127
+ +V + ++ L E KP+VAA+ G LGGGLELA+ C RIA
Sbjct: 107 MIAACKTPQEVMRLSQEGQKMFEKL-EKSAKPVVAAISGSCLGGGLELAISCQYRIATKD 165
Query: 128 -KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-- 184
KT LG+PE+ LG++PG GGTQRLP++VG+ A +MML ++I ++ K+GL+D +V
Sbjct: 166 KKTVLGVPEVLLGILPGAGGTQRLPQMVGIPAAFDMMLTGRNIRADRAKKMGLVDQLVEP 225
Query: 185 -----------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLK 228
T E L +++ +A +A ++ RS ++L S + ++V K
Sbjct: 226 LGPGIKPPEERTIEYLEEIAVTFAKGLADKKISLKRSKGLMERLTSYAMGIPFVRQQVYK 285
Query: 229 LARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
Q +K + P +DV++ G+ G +G L E++ F EL M S+ L+ ++
Sbjct: 286 KVEEQVRKQTKGLYPAPLKIIDVVKTGLEEGKEAGYLSESQKFGELAMTRESKALIGLYH 345
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347
Q K G + V+ +AV+G GLMG+GIA + + +LK+ L +G
Sbjct: 346 GQVLCKK----NKFGTPQKEVKNLAVLGAGLMGAGIAQVSVDKGLKTILKDATLTGLSRG 401
Query: 348 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 407
+ + + V + LT + + L G LDY F+ DMVIEAV E + LK K+
Sbjct: 402 QQQVFKGLNDKVKKKTLTSFERDFIFNNLTGQLDYQGFEKADMVIEAVFEDINLKHKVLK 461
Query: 408 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467
E+E P HC+ A+NTS + +N + + +++IG H+FSP M LLEI+ TE+TS
Sbjct: 462 EVEAVIPAHCVFASNTSALPINEIASVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKD 521
Query: 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 527
+ VG KV +VV + GF R P ++ GV ++DS FG
Sbjct: 522 TTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVGPKKLDSLTTGFGF 581
Query: 528 PIG 530
P+G
Sbjct: 582 PVG 584
>gi|336314685|ref|ZP_08569601.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
gi|335880984|gb|EGM78867.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
Length = 713
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 282/534 (52%), Gaps = 30/534 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ- 71
GV + + +N L +K E + D+K +V+ +G F G DI++
Sbjct: 22 GVISMDVAGESMNVLKAAFADEIKSLLSEIKNNKDIKGLVIISGKPDSFIAGADISMLDG 81
Query: 72 --KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A D+ M +LV N +E P+VAA+ G LGGGLELA+ CHAR+A
Sbjct: 82 CTTAQQAEDIGRMG----QLVFNQLEALSIPLVAAIHGPCLGGGLELALACHARVATTDN 137
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+ KA++M+L K + + + K+GL+DAVV
Sbjct: 138 KTVLGLPEVQLGLLPGSGGTQRLPRLVGIQKALDMILTGKQLRAAQAKKIGLVDAVVPKS 197
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL----QAKK-----TA 238
LL+ A+ +A + KP R + KL + + E R QA+K T
Sbjct: 198 ILLEA----AVQLALKGKPAARDV----KLNFVGKVLEKTPFGRAIVFSQAEKQTLAKTH 249
Query: 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 298
N P L I+ G+ G G+ EAK F EL M S+ L +FFA K
Sbjct: 250 GNYPAPLKILKAIKAGVDGGFNKGLDVEAKAFGELCMTSESKALRSLFFATTQMKKETGA 309
Query: 299 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRG 357
D+ PR V K A++GGGLMG GIA + V +K+++ + + +K + +
Sbjct: 310 GDV--VPRKVHKAAILGGGLMGGGIANVTATKAGVPVRIKDISQQGISNAMKYSYSLLEK 367
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
+ + +T+ + + +L G DYS F DVD+V+EAV E + LKQ++ +++E C H
Sbjct: 368 KLRKRFVTKTEVQKQMSLLTGTTDYSGFHDVDLVVEAVFEDLNLKQQMVADIETNCSEHT 427
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
+ A+NTS++ + + K + + +IG H+FSP MPL+E++ ++TSA+ I + +
Sbjct: 428 VFASNTSSLPIGQIAAKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAFAR 487
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
K P+VV + GF VNR Y A ++ G V +D A+ FG P+GP
Sbjct: 488 KQGKTPIVVKDGAGFYVNRILALYMNEAANILLEGEPVEALDKALVKFGFPVGP 541
>gi|425092648|ref|ZP_18495733.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|405611874|gb|EKB84640.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
Length = 714
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 284/534 (53%), Gaps = 16/534 (2%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLWPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQ 534
>gi|183599689|ref|ZP_02961182.1| hypothetical protein PROSTU_03178 [Providencia stuartii ATCC 25827]
gi|188021943|gb|EDU59983.1| fatty oxidation complex, alpha subunit FadJ [Providencia stuartii
ATCC 25827]
Length = 729
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 294/541 (54%), Gaps = 24/541 (4%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRF 61
A R+ + GV I + N VN L ++A S +K +V+T G F
Sbjct: 17 AFRLEVHAQTVGVIFIDVPNEKVNTLKAEFAQQFLSILQQAQSTPGLKGLVITSGKKDSF 76
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVE--LVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
G DI++ S ++S E L+ +E+ PIVAA+ G LGGGLELA+
Sbjct: 77 IAGADISMIANCQSKEQAS---ELSREGHLLFEKLENYPLPIVAAIHGACLGGGLELALA 133
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ + KT+LGLPE+ LG++PG GGTQRLP+L+G+ A++MML K + +++ K+
Sbjct: 134 CHVRVCSNDDKTRLGLPEVQLGLLPGSGGTQRLPKLIGIPNALDMMLTGKQLRAKQALKM 193
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGS--LSEAREVLKLARLQ 233
GL+D VV LL V+ A +R P W L ++ L + S A++ +
Sbjct: 194 GLVDDVVPETILLDVAIAMAKKGKIQRAPIHWQHRLLSSNLLRNKVFSSAKQTV------ 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
+KT + P + + V++ G+ G +G EAK F ELVM S L +FFA T+
Sbjct: 248 MRKTKGHYPAPEKIIQVVKTGVEKGAKAGYEAEAKAFGELVMTPESAALRSLFFA---TT 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP +++ V+GGGLMG GIA + ++ V +K++N + + ++
Sbjct: 305 ALKNETGSSAKPLAFKQIGVLGGGLMGGGIAFVTAMKGDLPVRIKDINEKGITHSLRYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + ++ + N + + G L+Y F+ D+V+EAV E + LKQK+ +E+++
Sbjct: 365 DLLTQRVNKRRMLARERNAVMAKISGTLNYQGFEHADIVVEAVFEDLSLKQKMVAEVQEV 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + E + +++IG H+FSP MPL+E++ ++T A+ I +
Sbjct: 425 THGKAIFASNTSSLPIHQIAENAAHPEKVIGLHYFSPVDKMPLVEVIPHQQTDAETIATV 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K +VVG+ GF VNR PY ++A L+S G + IDSA+ FG P+GP
Sbjct: 485 VAFAKRQGKTAIVVGDDAGFYVNRILAPYLCEAAECLMS-GESIEHIDSALVDFGFPVGP 543
Query: 532 F 532
F
Sbjct: 544 F 544
>gi|323530211|ref|YP_004232363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323387213|gb|ADX59303.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 692
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 268/527 (50%), Gaps = 30/527 (5%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
GN G +I NPPVNA ++ + GL D + + IV+ G+G F G DI F
Sbjct: 22 GNIGFLVID--NPPVNASSVEVRRGLLDGVHVFGADPTLLGIVIIGDGDTFVAGSDIREF 79
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
+ + S+ V+ IE P+VAA+ G ALGGG ELA+GC RIA +
Sbjct: 80 D--------APIQAPSLPEVILAIEGAPVPVVAAIHGNALGGGFELALGCDGRIAVSGSM 131
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+GLPE+ LG+IPG GGTQR+ L G +KAIE++ S+ +T+ E K+GLID VV ++L
Sbjct: 132 VGLPEVGLGMIPGAGGTQRVAYLTGKAKAIEIVTSSRRLTAAEAHKVGLIDLVV-EDDLA 190
Query: 191 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 250
+ +A + +++ R R S E E A L+ +K P++ Q +++
Sbjct: 191 DAAAKFAKSLDGKKR---RIRDRAVPAAS-DEEIEAATQAALRLRKQLPHVQQAVDAVNM 246
Query: 251 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV-----PNVTDIGLKP 305
E S +E VF L +R H+FF++R + PN +I
Sbjct: 247 AGEVPFDEALS---RERAVFNVLRKSVAARAFRHLFFSERECLRSRHGGRPNAANI---- 299
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R++ V+G G MG GIA VVL + N L + + L+ +GKL
Sbjct: 300 ---RRIGVVGAGTMGVGIAGCFADAGFEVVLFDTNEAALAAATEKLGQTYNSLLKKGKLE 356
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ V +F +VD+ IEAV E +K+ I ++L + P ILA+NTS
Sbjct: 357 EREIRERLARVRTVGHLQQFSNVDLAIEAVFEDFDVKRDIMAKLHEVLPGEAILASNTSY 416
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+DLN +G + +R IG HFFSPA M LLEIV TE SA+++ + + K + KVPVV
Sbjct: 417 LDLNRLGAEAGRPERTIGLHFFSPAQAMRLLEIVETEYVSAEIVDTAIAIAKRLSKVPVV 476
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
GF NR F Y + ++ G +ID A+ FG +GPF
Sbjct: 477 ARVAEGFIGNRIFAAYRKQCEYMMEEGALPEQIDEALEEFGFAMGPF 523
>gi|157426949|ref|NP_001098746.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase, alpha subunit a
[Danio rerio]
gi|157278881|gb|AAI15213.1| Hadha protein [Danio rerio]
Length = 761
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 286/560 (51%), Gaps = 42/560 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V+ EV D VA++ + +P VN L+ + A + + E VK A++++
Sbjct: 34 LARTHVSYEV-KDNVAVVRINDPTSKVNTLSKHMQAEMVEVMNEVWGNSSVKSAVLISRK 92
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q A +V+ + ++ IE PIVAA+ G LGGGLE A
Sbjct: 93 PGCFIAGADINMIQACTTAEEVTSLSQAGQKMF-EQIEKSPIPIVAAINGSCLGGGLEFA 151
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ C RIA + KT LG PE+ LG++PG GGTQRLP++VGL A +MML ++I +++
Sbjct: 152 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPAAFDMMLTGRNIRADKAK 211
Query: 176 KLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222
K+GL+ +V T E L +V+ +A +AA++ + K G + +
Sbjct: 212 KMGLVHQLVDPLGPGLKSPEERTIEYLEEVAVDFAKGLAAKK------VTLEKKKGLMQK 265
Query: 223 AREV---LKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVF 270
++ L L R Q KT Q+ ++ I+ GI G +G L EA+ F
Sbjct: 266 VQDFVMGLSLVRQQIYKTVHGKVMKQSKGLYPAPLKIIECIQTGIEKGNAAGYLAEAQNF 325
Query: 271 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 330
+L M SR L+ ++ Q A K G R V+ +A++G GLMG+GIA I
Sbjct: 326 GQLAMSSESRALIGLYHGQVACKK----NHFGKPEREVKNLAILGAGLMGAGIAQVTIDK 381
Query: 331 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 390
+ +LK+ E L +G + + + + LT + + + L G LDY F+ DM
Sbjct: 382 GVATILKDTTLEGLARGEQQVYKGLNDKTKKKSLTTFERDGIMSKLSGQLDYHGFEKADM 441
Query: 391 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 450
VIEAV E + +K K+ E+E PPHCI ATNTS + + + + +++IG H+FSP
Sbjct: 442 VIEAVFEDLAIKHKVLKEVEAVIPPHCIFATNTSALPIKDIAAASKRPEKVIGMHYFSPV 501
Query: 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 510
M LLEI+ T++TS + +G K+ VVVG+ GF R P A ++
Sbjct: 502 DKMQLLEIITTDKTSKDTTASAVAIGLKQGKLIVVVGDGPGFYTTRCLAPMLAEAVRILQ 561
Query: 511 LGVDVFRIDSAIRSFGLPIG 530
GV ++DS FG P+G
Sbjct: 562 EGVGPKKLDSLTTGFGFPVG 581
>gi|386741940|ref|YP_006215119.1| multifunctional fatty acid oxidation complex subunit alpha
[Providencia stuartii MRSN 2154]
gi|384478633|gb|AFH92428.1| multifunctional fatty acid oxidation complex subunit alpha
[Providencia stuartii MRSN 2154]
Length = 729
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 294/541 (54%), Gaps = 24/541 (4%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRF 61
A R+ + GV I + N VN L ++A S +K +V+T G F
Sbjct: 17 AFRLEVHAQTVGVIFIDVPNEKVNTLKAEFAQQFLSILQQAQSTPGLKGLVITSGKKDSF 76
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVE--LVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
G DI++ S ++S E L+ +E+ PIVAA+ G LGGGLELA+
Sbjct: 77 IAGADISMIANCQSKEQAS---ELSREGHLLFEKLENYPLPIVAAIHGACLGGGLELALA 133
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ + KT+LGLPE+ LG++PG GGTQRLP+L+G+ A++MML K + +++ K+
Sbjct: 134 CHVRVCSNDDKTRLGLPEVQLGLLPGSGGTQRLPKLIGIPNALDMMLTGKQLRAKQALKM 193
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGS--LSEAREVLKLARLQ 233
GL+D VV LL V+ A +R P W L ++ L + S A++ +
Sbjct: 194 GLVDDVVPETILLDVAIAMAKKGKIQRAPIHWQHRLLSSNLLRNKVFSSAKQTV------ 247
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
+KT + P + + V++ G+ G +G EAK F ELVM S L +FFA T+
Sbjct: 248 MRKTKGHYPAPEKIIQVVKTGVEKGAKAGYEAEAKAFGELVMTPESAALRSLFFA---TT 304
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 352
+ N T KP +++ V+GGGLMG GIA + ++ V +K++N + + ++
Sbjct: 305 ALKNETGSSAKPLAFKQIGVLGGGLMGGGIAFVTAMKGDLPVRIKDINEKGITHSLRYSW 364
Query: 353 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 412
+ V + ++ + N + + G L+Y F+ D+V+EAV E + LKQK+ +E+++
Sbjct: 365 DLLTQRVNKRRMLARERNAVMAKISGTLNYQGFEHADIVVEAVFEDLSLKQKMVAEVQEV 424
Query: 413 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472
I A+NTS++ ++ + E + +++IG H+FSP MPL+E++ ++T A+ I +
Sbjct: 425 THGKAIFASNTSSLPIHQIAENAAHPEKVIGLHYFSPVDKMPLVEVIPHQQTDAETIATV 484
Query: 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ K K +VVG+ GF VNR PY ++A L+S G + IDSA+ FG P+GP
Sbjct: 485 VAFAKRQGKTAIVVGDDAGFYVNRILAPYLCEAAECLMS-GESIEHIDSALVDFGFPVGP 543
Query: 532 F 532
F
Sbjct: 544 F 544
>gi|152995606|ref|YP_001340441.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinomonas sp. MWYL1]
gi|150836530|gb|ABR70506.1| fatty oxidation complex, alpha subunit FadB [Marinomonas sp. MWYL1]
Length = 716
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 263/538 (48%), Gaps = 20/538 (3%)
Query: 6 VTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
V + V + GVA +TL + VN + L + DD++ ++ F
Sbjct: 8 VKVAVDDAGVATVTLDLVGESVNKFNSLTLNELAEAVTALKHIDDLQGVIFASAKDVFVV 67
Query: 64 GFDINVFQKVHGAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F D L + + N I + P VAA+ G+ALGGG+ELA+ C
Sbjct: 68 GADITEFTSWFKLEDDDLADKLRHAHSIFNDISNLCCPTVAAINGIALGGGMELALACDY 127
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
R+ A ++GLPE LG+ PG+GGT RLPRL+G A E + SE+ +K G +DA
Sbjct: 128 RVMADTAKIGLPETQLGIYPGWGGTVRLPRLIGADNACEWICGGAQKRSEDAFKDGAVDA 187
Query: 183 VVTSEELLKVSRLW-------ALDIAARRKPWIRSLHRT--DKLGSLSEAREVLKLARLQ 233
VV + ++ + +R L+ ARR + T +K+ R V+
Sbjct: 188 VVPAAKVNESARHLIQQVLDGKLNYHARRDELRAPMEFTPIEKMMVFESVRGVV------ 241
Query: 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
K + P A + IE+GI + E K F +L ++ LV++F + +
Sbjct: 242 GAKAGKHYPAPMAAIKTIEKGISQDMEKALDTEIKGFIKLAKGPVAKSLVNLFLSDQQIK 301
Query: 294 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 353
K P V++ AV+G G+MG G+A +++K++ E L G+
Sbjct: 302 KTAGRYAKNATP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRPEALELGLSEANK 359
Query: 354 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 413
G V RG+LT +KA A+ + L Y EF+ VD+V+EAV+E+V +K+ + +E+E
Sbjct: 360 LFNGQVERGRLTTEKAFKAMNAIIPALSYGEFEHVDLVVEAVVENVKIKKSVLAEVETKI 419
Query: 414 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473
IL +NTSTI + + + + G HFF+P H MPL+E++R E+TS I +
Sbjct: 420 SDDAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAIAKTV 479
Query: 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 531
+ + K PVVV +C GF VNR FPY L++ G D +D + FG P+GP
Sbjct: 480 AYAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTMEKFGWPMGP 537
>gi|62531065|gb|AAH93195.1| Hadha protein [Danio rerio]
Length = 646
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 286/560 (51%), Gaps = 42/560 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V+ EV D VA++ + +P VN L+ + A + + E VK A++++
Sbjct: 34 LARTHVSYEV-KDNVAVVRINDPTSKVNTLSKHMQAEMVEVMNEVWGNSSVKSAVLISRK 92
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q A +V+ + ++ IE PIVAA+ G LGGGLE A
Sbjct: 93 PGCFIAGADINMIQACTTAEEVTSLSQAGQKMF-EQIEKSPIPIVAAINGSCLGGGLEFA 151
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGW 175
+ C RIA + KT LG PE+ LG++PG GGTQRLP++VGL A +MML ++I +++
Sbjct: 152 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPAAFDMMLTGRNIRADKAK 211
Query: 176 KLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222
K+GL+ +V T E L +V+ +A +AA++ + K G + +
Sbjct: 212 KMGLVHQLVDPLGPGLKSPEERTIEYLEEVAVDFAKGLAAKK------VTLEKKKGLMQK 265
Query: 223 AREV---LKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVF 270
++ L L R Q KT Q+ ++ I+ GI G +G L EA+ F
Sbjct: 266 VQDFVMGLSLVRQQIYKTVHGKVMKQSKGLYPAPLKIIECIQTGIEKGNAAGYLAEAQNF 325
Query: 271 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 330
+L M SR L+ ++ Q A K G R V+ +A++G GLMG+GIA I
Sbjct: 326 GQLAMSSESRALIGLYHGQVACKK----NHFGKPEREVKNLAILGAGLMGAGIAQVTIDK 381
Query: 331 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 390
+ +LK+ E L +G + + + + LT + + + L G LDY F+ DM
Sbjct: 382 GVATILKDTTLEGLARGEQQVYKGLNDKTKKKSLTTFERDGIMSKLSGQLDYHGFEKADM 441
Query: 391 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 450
VIEAV E + +K K+ E+E PPHCI ATNTS + + + + +++IG H+FSP
Sbjct: 442 VIEAVFEDLAIKHKVLKEVEAVIPPHCIFATNTSALPIKDIAAASKRPEKVIGMHYFSPV 501
Query: 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 510
M LLEI+ T++TS + +G K+ VVVG+ GF R P A ++
Sbjct: 502 DKMQLLEIITTDKTSKDTTASAVAIGLKQGKLIVVVGDGPGFYTTRCLAPMLAEAVRILQ 561
Query: 511 LGVDVFRIDSAIRSFGLPIG 530
GV ++DS FG P+G
Sbjct: 562 EGVGPKKLDSLTTGFGFPVG 581
>gi|31541815|ref|NP_076226.2| peroxisomal bifunctional enzyme [Mus musculus]
gi|341940646|sp|Q9DBM2.4|ECHP_MOUSE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|16877282|gb|AAH16899.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
gi|148665191|gb|EDK97607.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
Length = 718
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 281/522 (53%), Gaps = 20/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A+ V+AIV+ G F G DI+ F+
Sbjct: 11 LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPT 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +++ +V+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA K ++G P
Sbjct: 71 G---------LTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFP 121
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GTQ LPR+VG+ A++++ + I+++E KLG++D VV S+ + + +
Sbjct: 122 EVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIK 181
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
I +P R L++ + SL V A + +K P + C+ ++
Sbjct: 182 FAQTVIGKPIEPR-RILNKP--VPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQAS 238
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 311
+ H + +EAK+F L +R L + FFA+++ +K + K + V V
Sbjct: 239 VKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + I VV E + + L K I + + ++ K N
Sbjct: 299 GVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPN- 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ E VD+VIEAV E + LK+K+F+EL C P L TNTS +D++ +
Sbjct: 358 ----LRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDI 413
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPAH+M LLE++ + +S I +M++ K I K+ VVVGNC G
Sbjct: 414 ASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYG 473
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR PY L+ G +D + FG +GPF+
Sbjct: 474 FVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLEEFGFRMGPFR 515
>gi|221068364|ref|ZP_03544469.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220713387|gb|EED68755.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 719
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 276/545 (50%), Gaps = 25/545 (4%)
Query: 6 VTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
+ V DG+A +TL P +N + + L+ D V+ ++T F
Sbjct: 6 IRYAVDGDGIATLTLDYPGKTMNVIDQAFMDSLEACIARMQGDDGVRGGIITSGKDSFVA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVE----------LVVNLIEDCKKPIVAAVEGLALGGG 113
G D+ + ++ M D+ +E ++ +E KP+VAA+ G+ALGGG
Sbjct: 66 GADLMGME-----ANIDAMADMPIEELFASCASLSRLLRKLETLGKPLVAAINGMALGGG 120
Query: 114 LELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171
E+ + CH RIAA P +GLPE +G++PG GGTQRLPR++G+ A+ ++ K + +
Sbjct: 121 YEICLACHHRIAADAPTVMVGLPEAQVGLLPGAGGTQRLPRMIGILAAMPFLMEGKQLQA 180
Query: 172 EEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE----VL 227
+ + GL+D VV E+LL +R W L +PW R G L +AR V+
Sbjct: 181 VKAREAGLVDEVVAPEQLLGAARAWLLASPTAVQPWDVKGFRIPGGGPL-DARVAPAFVV 239
Query: 228 KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287
LQAK T NMP I EG G+ E+K L +RG++ F
Sbjct: 240 GNTLLQAK-TFHNMPAPLCIQSCIYEGCQLPMDKGLRIESKYMAMLSRSPVARGMIRTLF 298
Query: 288 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347
R+ ++ GL+P RK+ +IG G+MG+GIA I VVL + + KG
Sbjct: 299 VNRSKAEKGMHRPAGLEPFKCRKLGLIGAGMMGAGIALVAAQRGIQVVLMDRDQAAADKG 358
Query: 348 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 407
+ E + LV +G+ +++KA+ L + DY +D DMV+EAV E +K ++
Sbjct: 359 KQYSEKVLARLVDKGRQSREKADAILARIMPGTDYELLRDADMVVEAVFEDRAIKAEVTK 418
Query: 408 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467
+L+ PP C+LA+NTS + ++++ + + DR IG HFFSPA MPL+E++R +TS
Sbjct: 419 KLDAVLPPTCVLASNTSALPISLLAQASERPDRFIGLHFFSPADKMPLVEVIRGRQTSDA 478
Query: 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 527
+ + +KK P+VV + GF +R + A +V+ G+ I++ + G+
Sbjct: 479 TLAQALDFVAQLKKTPIVVNDKRGFFTSRFIGAFVDDAIGMVAEGIAPALIENCAKHAGM 538
Query: 528 PIGPF 532
P+GP
Sbjct: 539 PVGPL 543
>gi|12836375|dbj|BAB23628.1| unnamed protein product [Mus musculus]
Length = 718
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 281/522 (53%), Gaps = 20/522 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A+ V+AIV+ G F G DI+ F+
Sbjct: 11 LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPT 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +++ +V+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA K ++G P
Sbjct: 71 G---------LTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFP 121
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GTQ LPR+VG+ A++++ + I+++E KLG++D VV S+ + + +
Sbjct: 122 EVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIK 181
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
I +P R L++ + SL V A + +K P + C+ ++
Sbjct: 182 FAQTVIGKPIEPR-RILNKP--VPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQAS 238
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 311
+ H + +EAK+F L +R L + FFA+++ +K + K + V V
Sbjct: 239 VKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + I VV E + + L K I + + ++ K N
Sbjct: 299 GVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPN- 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ E VD+VIEAV E + LK+K+F+EL C P L TNTS +D++ +
Sbjct: 358 ----LRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDI 413
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPAH+M LLE++ + +S I +M++ K I K+ VVVGNC G
Sbjct: 414 ASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYG 473
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
F NR PY L+ G +D + FG +GPF+
Sbjct: 474 FVGNRMLAPYYNQGYFLIEEGSKPEGVDGVLEEFGFRMGPFR 515
>gi|242002892|ref|XP_002436089.1| hydroxyacyl-CoA dehydrogenase, putative [Ixodes scapularis]
gi|215499425|gb|EEC08919.1| hydroxyacyl-CoA dehydrogenase, putative [Ixodes scapularis]
Length = 738
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 280/547 (51%), Gaps = 39/547 (7%)
Query: 13 DGVAIITLINPP--VNALAIPIV----AGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
DGVA++ + +P VN+L ++ A LKD FE S A++++ G F G D
Sbjct: 20 DGVAVVRINSPDSRVNSLNAEVMEDMDAVLKD-FENNHSV--TSAVLISSKPGCFIAGAD 76
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I + KV S + ++V L D KPIVAA+ G LGGGLE+AM CH RIA
Sbjct: 77 ITMLDKVTSVSHASELSHEGQKMVQKLA-DSPKPIVAAIMGSCLGGGLEVAMACHYRIAV 135
Query: 127 P--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
KT LGLPE+ LG++PG GGTQRLP+L+ L A++MML ++I +++ K+GL+D V
Sbjct: 136 KERKTVLGLPEVMLGILPGAGGTQRLPKLIQLPTALDMMLTGRNIRADQAKKMGLVDQTV 195
Query: 185 TS-------------EELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEARE 225
E L +V+ A +A+ R +P + L +K S AR
Sbjct: 196 ELLGPGLKPMEDRMIEYLEEVAVEAAKGLASNTLTPNRTRPLMERL--MNKALSYEYARN 253
Query: 226 -VLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 283
V + A+ Q K + P L+V+ GI G +G E + F ELVM S+ L+
Sbjct: 254 YVFEKAKGQVMKMTQGLYPAPLKILEVVRTGIEKGPQAGYKAEHEGFGELVMTPQSKALI 313
Query: 284 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343
++F Q K G V+ V V+G GLMG+GIA + V+LK+ N +
Sbjct: 314 GLYFGQVTCKK----NRFGEPKNKVKTVGVLGAGLMGAGIAHVSVDKGYNVLLKDTNQKG 369
Query: 344 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 403
L +G + I+ + V + +L+ + + + L+ L Y F D+VIEAV E + +K
Sbjct: 370 LGRGEQQIQKGLSDAVKKKRLSAIEKDRFMSALEPTLKYDRFNQADIVIEAVFEDIGVKH 429
Query: 404 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463
+ E+E+ PPHC+ A+NTS + + + E + ++++G H+FSP M LLE++ T++
Sbjct: 430 TVLKEVEQHIPPHCVFASNTSALPIAKIAEASKRPEKVVGMHYFSPVDKMQLLEVITTDK 489
Query: 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 523
TS + VG KV + V + GF R A ++ G V +DS +
Sbjct: 490 TSQDTAATAVDVGLKQGKVVITVKDAPGFYTTRILAAMMAEALRVLQEGTTVKELDSLTK 549
Query: 524 SFGLPIG 530
FG P+G
Sbjct: 550 KFGFPVG 556
>gi|348028640|ref|YP_004871326.1| multifunctional fatty acid oxidation complex subunit alpha
[Glaciecola nitratireducens FR1064]
gi|347945983|gb|AEP29333.1| multifunctional fatty acid oxidation complex subunit alpha
[Glaciecola nitratireducens FR1064]
Length = 702
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 288/537 (53%), Gaps = 18/537 (3%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T++ DG+AI+T+ P +N L + +E + D ++ +V+ +G F
Sbjct: 5 TLQKREDGIAILTMDVPGDSMNTLKADFGDEVTAILDEIENDDAIRGVVVASGKKDSFVA 64
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + + A + + S + + + ++D KK VAA+ G ALGGGLELA+ CH R
Sbjct: 65 GADVTMLAACNDADEAEEL-STSGQRLFDRMQDMKKTFVAAIHGPALGGGLELALACHYR 123
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ + PKTQLGLPE+ LG++PG GGTQRLP L+G+ +A++MML + +++ K G++D
Sbjct: 124 VCSDSPKTQLGLPEVQLGLLPGSGGTQRLPALIGIQQAMKMMLTGAPVRAKQAKKYGIVD 183
Query: 182 AVVTSEELLKVSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVL-KLARLQA-KKT 237
+V LL V A+++A ++ K ++ L + S R +L K AR Q KT
Sbjct: 184 DMVPQSILLDV----AIEMANKKISKRVLKKDMMAKALENTSFGRNILFKKAREQTLSKT 239
Query: 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297
N P +D IE G + G EA++F +LVM S+ L +FFA K
Sbjct: 240 LGNYPAPMYIIDCIEAG-TNDSRKGYATEARLFGQLVMTPESKQLREIFFATTDMKKESG 298
Query: 298 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVR 356
V G+ V+K+ V+GGGLMG GIA + +K++N + I+ +
Sbjct: 299 VD--GVAAVKVKKIGVLGGGLMGGGIAFVTATKAKVPARIKDINPNGIAGAIRYSYDILN 356
Query: 357 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 416
V + + + + L +L G LDYS +++ DMVIEAV E V LKQK+ +++E+ C H
Sbjct: 357 KKVKKRFMLKTEMQKQLSLLSGCLDYSGYQNNDMVIEAVFEDVKLKQKMVADIEEHCNEH 416
Query: 417 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 476
+ A+NTS+I + + + + ++G H+FSP MPL E++ +TS Q I +
Sbjct: 417 TVFASNTSSIPIAEIAAEAKRPENVVGLHYFSPVDKMPLAEVIPHAKTSDQTISTTVEFA 476
Query: 477 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A + G + ID A+ FG P+GPF+
Sbjct: 477 KRQGKTPIVVKDGAGFYVNRILAPYVSEAGFMAIEGQPLDSIDKALMKFGFPVGPFK 533
>gi|83956183|ref|ZP_00964636.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. NAS-14.1]
gi|83839569|gb|EAP78749.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. NAS-14.1]
Length = 695
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 266/532 (50%), Gaps = 31/532 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDK----FEEATSRDDVKAIVLTGNGGRF 61
V + ND AI+T+ N P+N + + AG++ E +R +++TG G F
Sbjct: 5 VELSFSNDA-AILTIDNSPLNLINAEVRAGIQHCIFKVLETGATR-----LIITGTGTTF 58
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G D F K L D + V+ + P +AA+ G ALGGGLE+A+ C
Sbjct: 59 VAGADAKEFGK--------LPVDPQLNDVLMQLAHLPIPTIAAINGAALGGGLEIALACC 110
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
RIA+ +LGLPE+ LG++PG GGTQRLPRL+G+ A++M++ K++++E+ K+GLI
Sbjct: 111 YRIASTSAKLGLPEVNLGIVPGAGGTQRLPRLIGIEAALDMIVTGKAVSAEQALKMGLI- 169
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
+LL L A A + + D L S ++AR + P
Sbjct: 170 ------QLLADDPLGA--AIALDDDVLEAAQAPDNLPSPKPNHVAAEVARAHVARRMPGQ 221
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
Q ++++ + + E F +L D +R L HVFF +R + N
Sbjct: 222 NAPQVAVNLVATSATTPLHDALASERSAFLDLRTSDQARALRHVFFTERTAT---NKGRA 278
Query: 302 GLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+P R V+GGG MG+ IA I V + E ++ K ++ + ++
Sbjct: 279 YPRPSRDAETAIVVGGGNMGAAIAYTLATAGISVTVVERSASSAEWASKNLQKLIDQGIS 338
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
RG L+ D A L V Y D+ IEA E +K I +ELE A PP I+A
Sbjct: 339 RGILSVDAAKTVEDRLVTVSGYDALPPTDLAIEAAFEDFAVKTAILTELEGALPPETIIA 398
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTS +D+N + + R +G HFFSPAH+M LLE+VR++RTS + + + +
Sbjct: 399 TNTSYLDVNRLSDGLKHPARFVGMHFFSPAHIMKLLEVVRSDRTSDGTLGAALVLAHRLG 458
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 532
K+PV+ G C GF NR Y ++A L+ G +V ID+A+R FG+ +GP+
Sbjct: 459 KIPVLSGVCDGFIGNRILSSYRRAANRLLVEGANVDEIDAAMRGFGMAMGPY 510
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,018,565,913
Number of Sequences: 23463169
Number of extensions: 333778090
Number of successful extensions: 1090945
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 27607
Number of HSP's successfully gapped in prelim test: 4997
Number of HSP's that attempted gapping in prelim test: 1027773
Number of HSP's gapped (non-prelim): 35364
length of query: 539
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 391
effective length of database: 8,886,646,355
effective search space: 3474678724805
effective search space used: 3474678724805
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)