BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009256
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
Length = 721
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/530 (76%), Positives = 476/530 (89%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
APK QLGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDKA AL + KGVLDY+EF DVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEG 535
VGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS I SFGLP+GPFQ G
Sbjct: 487 VGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLG 536
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation multifunctional protein
OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2
Length = 726
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/531 (74%), Positives = 458/531 (86%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQ
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQ 534
>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Cucumis sativus PE=1 SV=1
Length = 725
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/533 (62%), Positives = 421/533 (78%), Gaps = 1/533 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFR 537
>sp|O49809|MFPA_BRANA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Brassica napus PE=2 SV=2
Length = 725
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/529 (62%), Positives = 417/529 (78%), Gaps = 1/529 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+EVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG G+FSGGF
Sbjct: 9 TTIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAKGKFSGGF 68
Query: 66 DINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F ++ G + +S++++ +L+E KKP VAA++GLALGGGLEL+M CHARI
Sbjct: 69 DISGFGEIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAIDGLALGGGLELSMACHARI 128
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAVV
Sbjct: 129 SAPGAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVV 188
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
ELL +R WALDIA RRKPW+ S+ +TDKL L EARE+LK A+ Q ++ APNM
Sbjct: 189 PPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHP 248
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
CL+ +E GIV G +G+ KEA+V E++ LDT++GL+HVFF+QR T+KVP VTD GL
Sbjct: 249 LMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLV 308
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+
Sbjct: 309 PRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKM 368
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+++K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NTS
Sbjct: 369 SKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT TSAQVI+DL+ VGK I+K PV
Sbjct: 429 TIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVDLLDVGKKIRKTPV 488
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNCTGFAVNR FFPY+Q+A LV G D + ID A+ FG+P+GPF+
Sbjct: 489 VVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKAVSKFGMPMGPFR 537
>sp|Q9ZPI5|MFP2_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2
OS=Arabidopsis thaliana GN=MFP2 PE=1 SV=1
Length = 725
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/532 (62%), Positives = 416/532 (78%), Gaps = 5/532 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFR 537
>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
Length = 718
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 296/531 (55%), Gaps = 26/531 (4%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+ VA+ITL NPPVNAL+ + + E A S V A+V+ G GRF GG DI
Sbjct: 5 ELVKRSVALITLTNPPVNALSSAVRHAISKTMERALSDPKVTAVVICGENGRFCGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F AG + P V + ++ IE +KP+VAA+EG+ALGGG ELA+ CH RIA K
Sbjct: 65 EF-----AGPLRGPPLVPL---LDAIEAGEKPVVAAIEGVALGGGFELALVCHYRIAHYK 116
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
+LGLPE+TLG++P GGTQRLPRL+G+ A+E++ + ++++E KLG++D V T +
Sbjct: 117 ARLGLPEVTLGILPAAGGTQRLPRLIGIPAALELITTGRHVSAQEALKLGMVDQV-TEQN 175
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAKKTAPNMPQHQA 246
+V+ +AL KP S R L + + + A +Q +K A + A
Sbjct: 176 TCEVALEFALKAVG--KPL--SSRRLSMLTTPCPPGLDGIFEAATMQVQKKARGVMAPLA 231
Query: 247 CLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIG- 302
C+ + + YS G+ +E ++ L ++ L + FFAQR K +P+
Sbjct: 232 CVQAVRAATLP--YSEGIKREGELMATLFSSGQAQALQYSFFAQRTAEKWTLPSGAQWNN 289
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
KPR ++ AVIG G MG GI + L + + + V SE L ++T V G++ R
Sbjct: 290 SKPREIQSAAVIGLGTMGRGIVVS--LARVGISVIAVESEKKL--LETGRQMVIGMLER- 344
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+ + +L +LK L + KDVD+VIEAV E + LK++IF EL + C P +L +N
Sbjct: 345 DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPATLLCSN 404
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + + T + G HFFSPAHVM LLE+V R+S + I M++GK + KV
Sbjct: 405 TSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGKV 464
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V VGNC GF NR PY + A L+ G +ID A+ FG +G F+
Sbjct: 465 SVAVGNCPGFVGNRMLMPYLEQATFLLEEGATPQQIDKALEDFGFAMGVFR 515
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 288/539 (53%), Gaps = 16/539 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 354
P P + V ++GGGLMG+GIA + V +K++N + + +K
Sbjct: 299 PGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQ 355
Query: 355 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 414
+ G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 356 LEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCA 415
Query: 415 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I +
Sbjct: 416 AHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVK 475
Query: 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 476 LAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3
Length = 723
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 292/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>sp|Q5R5M8|ECHP_PONAB Peroxisomal bifunctional enzyme OS=Pongo abelii GN=EHHADH PE=2 SV=1
Length = 723
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 291/532 (54%), Gaps = 29/532 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHSEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + GV KE ++F L +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAICKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
+ VVVGNC GF NR PY A L+ G +D + FG +GPF+
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFR 520
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>sp|A4WCW6|FADJ_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
(strain 638) GN=fadJ PE=3 SV=1
Length = 715
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 284/534 (53%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L ++ ++ +++ ++ ++ F
Sbjct: 8 TLNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARAKSAQEAEELARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + K+GL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL A+++A + + R L +++ G L A ++ + +KT
Sbjct: 187 EVVPHSILLTA----AVELAQKERQASRHLPVRERILAGPLGRALLFNRVGKKTEQKTKG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++ P V G G TA + V +K++N++ + ++ + V
Sbjct: 302 EVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDINAKGINHALQYSWQLLDQKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + AL ++ G +D+S FK D+VIEAV E + LKQ++ +++E+ C PH I
Sbjct: 361 KRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDLQLKQQMVADVEQYCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ E TSAQ + ++ + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHESTSAQTVATVVKLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A L++ G V +D A+ FG P+GP Q
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVDDALVKFGFPVGPIQ 534
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 281/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 282 bits (721), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQ 534
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 281 bits (720), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 281 bits (719), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 282/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQ 534
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASSEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-INALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 282/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKD 298
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQ 534
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQ 534
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 278/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT L LPE+ LG++PG GTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 281/538 (52%), Gaps = 14/538 (2%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKK- 297
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ +D P + G G TA + V +K++N + + +K +
Sbjct: 298 DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP Q
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQ 534
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 279/534 (52%), Gaps = 14/534 (2%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTACKVG-LPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
K P+VV + GF VNR PY A +++ G V ID+ + FG P+GP Q
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAVLVKFGFPVGPIQ 534
>sp|B5BBA1|FADJ_SALPK Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain AKU_12601) GN=fadJ PE=3 SV=1
Length = 715
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q5PCX6|FADJ_SALPA Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fadJ PE=3 SV=1
Length = 715
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 276/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINKAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|P07896|ECHP_RAT Peroxisomal bifunctional enzyme OS=Rattus norvegicus GN=Ehhadh PE=1
SV=2
Length = 722
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 288/529 (54%), Gaps = 30/529 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 11 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 68 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 123 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 182
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 183 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 232
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 233 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 292
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 293 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 352 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 410
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 411 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 470
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
VVGNC GF NR PY L+ G +D + FG +GPF+
Sbjct: 471 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFR 519
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|B4TQC2|FADJ_SALSV Fatty acid oxidation complex subunit alpha OS=Salmonella
schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1
Length = 715
Score = 271 bits (694), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 275/528 (52%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 274/528 (51%), Gaps = 14/528 (2%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 533
V + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 534
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,397,878
Number of Sequences: 539616
Number of extensions: 8136249
Number of successful extensions: 26627
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 25548
Number of HSP's gapped (non-prelim): 437
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)