Query 009256
Match_columns 539
No_of_seqs 483 out of 3664
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:23:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 2E-101 7E-106 849.7 52.9 518 8-539 25-545 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 2E-95 7E-100 807.5 51.8 534 1-539 4-543 (725)
3 1wdk_A Fatty oxidation complex 100.0 1E-94 3.5E-99 801.7 50.0 532 3-539 5-545 (715)
4 3hrx_A Probable enoyl-COA hydr 100.0 6.3E-59 2.1E-63 455.1 26.7 250 6-295 2-252 (254)
5 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 1.1E-58 3.9E-63 456.9 26.3 254 4-295 15-272 (274)
6 4fzw_A 2,3-dehydroadipyl-COA h 100.0 1.3E-58 4.4E-63 452.8 23.1 252 3-295 4-256 (258)
7 3kqf_A Enoyl-COA hydratase/iso 100.0 6E-57 2E-61 443.1 24.3 256 1-295 5-263 (265)
8 3pea_A Enoyl-COA hydratase/iso 100.0 4.9E-57 1.7E-61 442.7 23.5 255 3-295 5-259 (261)
9 3i47_A Enoyl COA hydratase/iso 100.0 9.1E-57 3.1E-61 441.9 25.2 257 1-296 1-261 (268)
10 3hin_A Putative 3-hydroxybutyr 100.0 5.4E-57 1.9E-61 444.4 20.2 255 1-296 13-268 (275)
11 3moy_A Probable enoyl-COA hydr 100.0 1.3E-56 4.3E-61 440.0 22.7 254 1-295 6-261 (263)
12 3h81_A Enoyl-COA hydratase ECH 100.0 1.7E-56 5.9E-61 441.5 22.8 254 1-295 22-276 (278)
13 3gow_A PAAG, probable enoyl-CO 100.0 1.2E-55 4.1E-60 431.3 26.6 250 6-295 2-252 (254)
14 3fdu_A Putative enoyl-COA hydr 100.0 8.5E-56 2.9E-60 434.8 24.6 254 1-297 1-259 (266)
15 3myb_A Enoyl-COA hydratase; ss 100.0 1.4E-55 4.6E-60 437.3 24.9 257 1-297 22-281 (286)
16 3lke_A Enoyl-COA hydratase; ny 100.0 5.2E-56 1.8E-60 435.9 21.5 256 1-294 1-262 (263)
17 3sll_A Probable enoyl-COA hydr 100.0 1.7E-55 5.8E-60 437.8 25.3 255 4-296 24-288 (290)
18 3p5m_A Enoyl-COA hydratase/iso 100.0 1.7E-55 5.9E-60 430.2 24.8 248 3-295 5-253 (255)
19 3swx_A Probable enoyl-COA hydr 100.0 4E-56 1.4E-60 437.5 20.4 256 1-295 5-263 (265)
20 3g64_A Putative enoyl-COA hydr 100.0 2.6E-55 8.7E-60 435.0 25.9 256 3-296 16-276 (279)
21 3qxz_A Enoyl-COA hydratase/iso 100.0 5.6E-56 1.9E-60 436.1 20.1 254 3-296 6-263 (265)
22 1nzy_A Dehalogenase, 4-chlorob 100.0 1.8E-55 6.1E-60 434.1 22.4 258 1-297 1-263 (269)
23 3qmj_A Enoyl-COA hydratase, EC 100.0 9.4E-56 3.2E-60 432.9 20.2 251 3-291 5-256 (256)
24 3rsi_A Putative enoyl-COA hydr 100.0 5.1E-55 1.7E-59 429.6 24.8 253 1-295 5-263 (265)
25 2ppy_A Enoyl-COA hydratase; be 100.0 9.8E-55 3.3E-59 427.8 26.0 252 3-294 8-262 (265)
26 1ef8_A Methylmalonyl COA decar 100.0 9.8E-55 3.4E-59 426.9 26.0 254 1-295 1-259 (261)
27 3gkb_A Putative enoyl-COA hydr 100.0 2.6E-55 8.8E-60 435.2 22.0 251 3-294 8-266 (287)
28 4hdt_A 3-hydroxyisobutyryl-COA 100.0 8.3E-55 2.8E-59 443.1 26.1 289 3-297 8-325 (353)
29 2ej5_A Enoyl-COA hydratase sub 100.0 6.2E-55 2.1E-59 427.3 24.2 251 4-295 3-255 (257)
30 2pbp_A Enoyl-COA hydratase sub 100.0 6.7E-55 2.3E-59 427.3 24.2 253 1-294 1-255 (258)
31 3tlf_A Enoyl-COA hydratase/iso 100.0 3E-55 1E-59 433.6 21.2 252 4-295 11-272 (274)
32 3trr_A Probable enoyl-COA hydr 100.0 6E-55 2E-59 426.4 22.6 249 1-295 5-254 (256)
33 3qre_A Enoyl-COA hydratase, EC 100.0 6.6E-56 2.3E-60 441.7 15.5 256 3-296 28-293 (298)
34 3r9t_A ECHA1_1; ssgcid, seattl 100.0 3.7E-55 1.3E-59 430.5 19.8 255 1-295 5-265 (267)
35 2vx2_A Enoyl-COA hydratase dom 100.0 1.5E-54 5.2E-59 429.9 23.8 253 3-294 32-285 (287)
36 3r9q_A Enoyl-COA hydratase/iso 100.0 3.5E-55 1.2E-59 429.2 18.5 249 4-295 11-260 (262)
37 3hp0_A Putative polyketide bio 100.0 2.2E-54 7.4E-59 424.4 24.1 253 1-296 4-258 (267)
38 1dci_A Dienoyl-COA isomerase; 100.0 5.6E-54 1.9E-58 425.0 26.9 256 3-295 2-273 (275)
39 1wz8_A Enoyl-COA hydratase; ly 100.0 1.5E-54 5.1E-59 426.1 22.6 253 3-294 9-263 (264)
40 4eml_A Naphthoate synthase; 1, 100.0 1.6E-54 5.6E-59 427.5 22.8 255 3-296 9-270 (275)
41 4f47_A Enoyl-COA hydratase ECH 100.0 8.9E-55 3E-59 430.9 20.2 253 4-295 20-276 (278)
42 3qk8_A Enoyl-COA hydratase ECH 100.0 6.6E-55 2.3E-59 429.9 18.7 253 3-296 12-268 (272)
43 3qxi_A Enoyl-COA hydratase ECH 100.0 3.1E-54 1.1E-58 423.5 22.7 250 2-295 13-263 (265)
44 2uzf_A Naphthoate synthase; ly 100.0 1.1E-53 3.6E-58 421.8 25.0 253 3-296 12-268 (273)
45 2f6q_A Peroxisomal 3,2-trans-e 100.0 4.3E-54 1.5E-58 425.8 21.7 252 2-292 24-279 (280)
46 3rrv_A Enoyl-COA hydratase/iso 100.0 6.6E-54 2.3E-58 423.0 22.3 247 4-290 28-276 (276)
47 3t89_A 1,4-dihydroxy-2-naphtho 100.0 6.8E-54 2.3E-58 425.4 22.5 257 1-296 24-284 (289)
48 2j5i_A P-hydroxycinnamoyl COA 100.0 5.3E-54 1.8E-58 424.6 21.4 254 3-294 8-271 (276)
49 3oc7_A Enoyl-COA hydratase; se 100.0 1.6E-53 5.5E-58 419.7 24.4 252 1-294 5-265 (267)
50 2fbm_A Y chromosome chromodoma 100.0 3.7E-54 1.3E-58 427.7 19.8 256 2-296 21-282 (291)
51 1sg4_A 3,2-trans-enoyl-COA iso 100.0 2.6E-54 9E-59 423.4 18.2 251 6-294 5-259 (260)
52 2gtr_A CDY-like, chromodomain 100.0 4.9E-54 1.7E-58 421.9 19.8 253 3-294 4-261 (261)
53 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 5.6E-54 1.9E-58 432.5 20.1 256 3-296 54-329 (334)
54 1uiy_A Enoyl-COA hydratase; ly 100.0 1.6E-53 5.4E-58 416.6 21.5 249 6-294 2-253 (253)
55 2a7k_A CARB; crotonase, antibi 100.0 1E-53 3.5E-58 417.2 19.8 247 6-291 2-250 (250)
56 3lao_A Enoyl-COA hydratase/iso 100.0 4.3E-54 1.5E-58 421.3 17.1 247 2-287 10-258 (258)
57 3pe8_A Enoyl-COA hydratase; em 100.0 4.8E-54 1.6E-58 419.4 17.0 244 3-294 8-255 (256)
58 3h0u_A Putative enoyl-COA hydr 100.0 3.5E-53 1.2E-57 420.3 23.4 247 3-288 7-257 (289)
59 1mj3_A Enoyl-COA hydratase, mi 100.0 1.7E-53 5.7E-58 417.7 20.7 254 2-295 2-258 (260)
60 3he2_A Enoyl-COA hydratase ECH 100.0 3.8E-53 1.3E-57 413.8 21.6 242 3-295 20-262 (264)
61 3l3s_A Enoyl-COA hydratase/iso 100.0 5.2E-53 1.8E-57 414.6 21.6 250 2-289 4-258 (263)
62 4di1_A Enoyl-COA hydratase ECH 100.0 9.9E-53 3.4E-57 414.2 20.9 246 1-296 22-269 (277)
63 1hzd_A AUH, AU-binding protein 100.0 1.3E-52 4.4E-57 413.8 19.1 254 4-295 8-270 (272)
64 3isa_A Putative enoyl-COA hydr 100.0 4.7E-52 1.6E-56 405.7 20.7 243 5-297 8-251 (254)
65 3bpt_A 3-hydroxyisobutyryl-COA 100.0 1.2E-51 4E-56 422.2 23.9 290 3-296 5-331 (363)
66 3ju1_A Enoyl-COA hydratase/iso 100.0 6.7E-52 2.3E-56 428.2 17.5 287 4-297 42-377 (407)
67 2q35_A CURF; crotonase, lyase; 100.0 1.5E-51 5.2E-56 399.4 17.8 238 6-287 5-243 (243)
68 1pjh_A Enoyl-COA isomerase; EC 100.0 2.8E-51 9.6E-56 406.2 19.3 244 1-294 6-267 (280)
69 2j5g_A ALR4455 protein; enzyme 100.0 2.7E-50 9.4E-55 394.1 18.8 238 3-290 22-262 (263)
70 3r6h_A Enoyl-COA hydratase, EC 100.0 3E-50 1E-54 387.9 17.7 230 1-271 3-232 (233)
71 3ot6_A Enoyl-COA hydratase/iso 100.0 8.6E-50 2.9E-54 384.4 15.6 225 4-270 6-231 (232)
72 3ado_A Lambda-crystallin; L-gu 100.0 4.4E-49 1.5E-53 393.1 21.2 232 307-538 5-244 (319)
73 3m6n_A RPFF protein; enoyl-COA 100.0 1.7E-48 5.7E-53 389.9 23.3 254 3-294 29-299 (305)
74 3njd_A Enoyl-COA hydratase; ss 100.0 2.2E-48 7.5E-53 393.8 24.4 204 1-209 32-265 (333)
75 1szo_A 6-oxocamphor hydrolase; 100.0 2.7E-48 9.2E-53 379.3 18.9 237 4-291 16-254 (257)
76 2np9_A DPGC; protein inhibitor 100.0 3.2E-48 1.1E-52 399.9 18.5 246 4-292 167-440 (440)
77 3t3w_A Enoyl-COA hydratase; ss 100.0 3.3E-47 1.1E-51 376.3 22.1 205 1-209 17-226 (279)
78 3k6j_A Protein F01G10.3, confi 100.0 1.3E-44 4.5E-49 377.1 27.4 233 304-539 50-283 (460)
79 3mog_A Probable 3-hydroxybutyr 100.0 8.8E-42 3E-46 361.2 25.4 233 307-539 4-238 (483)
80 2w3p_A Benzoyl-COA-dihydrodiol 100.0 8.9E-43 3E-47 361.4 15.0 204 3-209 20-245 (556)
81 2dpo_A L-gulonate 3-dehydrogen 100.0 2E-41 6.8E-46 340.6 21.2 232 307-538 5-244 (319)
82 1zcj_A Peroxisomal bifunctiona 100.0 5.4E-41 1.8E-45 355.3 23.9 263 275-539 1-266 (463)
83 4e12_A Diketoreductase; oxidor 100.0 3.1E-40 1E-44 328.5 24.4 233 307-539 3-240 (283)
84 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 2.7E-38 9.2E-43 317.7 25.5 237 303-539 10-254 (302)
85 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 3.8E-39 1.3E-43 319.0 17.8 209 309-539 13-225 (293)
86 3bf0_A Protease 4; bacterial, 99.9 1.2E-22 3.9E-27 220.4 6.7 169 12-198 300-516 (593)
87 3rst_A Signal peptide peptidas 99.8 2E-20 6.8E-25 180.3 13.7 168 12-198 2-225 (240)
88 3obb_A Probable 3-hydroxyisobu 99.8 3.8E-20 1.3E-24 184.3 11.6 189 307-526 2-213 (300)
89 3viv_A 441AA long hypothetical 99.8 1.1E-19 3.8E-24 172.3 13.2 148 12-186 7-174 (230)
90 3tri_A Pyrroline-5-carboxylate 99.8 1.3E-18 4.3E-23 172.1 16.4 153 308-486 3-161 (280)
91 4gbj_A 6-phosphogluconate dehy 99.8 2.5E-19 8.6E-24 178.4 9.0 191 309-526 6-214 (297)
92 3gt0_A Pyrroline-5-carboxylate 99.8 6.5E-18 2.2E-22 164.1 14.4 188 309-522 3-204 (247)
93 2h78_A Hibadh, 3-hydroxyisobut 99.7 8.4E-18 2.9E-22 168.3 14.5 192 307-526 2-213 (302)
94 3doj_A AT3G25530, dehydrogenas 99.7 1.9E-18 6.5E-23 173.5 9.3 193 306-526 19-231 (310)
95 3qha_A Putative oxidoreductase 99.7 6.2E-18 2.1E-22 168.7 11.1 184 309-522 16-222 (296)
96 2ewd_A Lactate dehydrogenase,; 99.7 2E-18 6.8E-23 173.9 6.7 193 309-537 5-226 (317)
97 3g0o_A 3-hydroxyisobutyrate de 99.7 4E-17 1.4E-21 163.4 15.7 192 308-526 7-219 (303)
98 3pef_A 6-phosphogluconate dehy 99.7 7.3E-18 2.5E-22 167.5 10.0 191 309-526 2-211 (287)
99 3ggo_A Prephenate dehydrogenas 99.7 1E-16 3.4E-21 160.9 17.4 156 307-488 32-205 (314)
100 3qsg_A NAD-binding phosphogluc 99.7 7.5E-18 2.6E-22 169.3 8.9 188 306-525 22-231 (312)
101 4dll_A 2-hydroxy-3-oxopropiona 99.7 2.4E-17 8.3E-22 166.2 12.2 191 308-526 31-239 (320)
102 3pdu_A 3-hydroxyisobutyrate de 99.7 2.1E-17 7.2E-22 164.1 11.4 191 308-525 1-210 (287)
103 3d1l_A Putative NADP oxidoredu 99.7 6.6E-17 2.3E-21 158.7 13.5 199 309-537 11-235 (266)
104 3l6d_A Putative oxidoreductase 99.7 6.2E-16 2.1E-20 154.9 13.9 186 308-522 9-211 (306)
105 3c24_A Putative oxidoreductase 99.6 2.6E-15 8.9E-20 148.9 15.5 188 308-522 11-228 (286)
106 2izz_A Pyrroline-5-carboxylate 99.6 2E-15 6.8E-20 152.3 14.8 188 308-522 22-228 (322)
107 3dfu_A Uncharacterized protein 99.6 7.2E-16 2.5E-20 146.1 10.7 157 308-517 6-172 (232)
108 3g79_A NDP-N-acetyl-D-galactos 99.6 4.9E-16 1.7E-20 163.3 9.3 205 307-525 17-274 (478)
109 4ezb_A Uncharacterized conserv 99.6 9.2E-15 3.2E-19 147.0 17.8 190 308-525 24-233 (317)
110 2y0c_A BCEC, UDP-glucose dehyd 99.6 1.1E-15 3.7E-20 161.8 11.5 202 309-522 9-257 (478)
111 3mog_A Probable 3-hydroxybutyr 99.6 1E-15 3.6E-20 161.7 11.2 112 422-539 324-437 (483)
112 2f9y_B Acetyl-coenzyme A carbo 99.6 1.7E-15 6E-20 149.6 11.1 157 15-204 120-281 (304)
113 4e21_A 6-phosphogluconate dehy 99.6 8E-15 2.7E-19 149.3 15.8 188 308-525 22-273 (358)
114 2i76_A Hypothetical protein; N 99.6 1.3E-15 4.5E-20 150.2 9.1 194 309-537 3-223 (276)
115 2uyy_A N-PAC protein; long-cha 99.6 1.2E-15 4E-20 153.7 8.8 188 308-522 30-235 (316)
116 1yqg_A Pyrroline-5-carboxylate 99.6 2.1E-14 7.2E-19 140.4 17.0 182 310-522 2-196 (263)
117 1y7o_A ATP-dependent CLP prote 99.6 2.4E-15 8.3E-20 142.1 9.0 140 27-188 53-214 (218)
118 4a7p_A UDP-glucose dehydrogena 99.6 2.4E-14 8.4E-19 149.5 17.3 199 310-522 10-251 (446)
119 3ojo_A CAP5O; rossmann fold, c 99.6 1.6E-14 5.5E-19 149.8 15.7 197 309-522 12-250 (431)
120 3pid_A UDP-glucose 6-dehydroge 99.6 9E-15 3.1E-19 151.4 13.3 195 307-522 35-268 (432)
121 3ktd_A Prephenate dehydrogenas 99.6 5.5E-15 1.9E-19 149.2 10.8 153 307-487 7-186 (341)
122 3cky_A 2-hydroxymethyl glutara 99.6 8E-15 2.7E-19 146.4 11.8 187 309-523 5-210 (301)
123 3gg2_A Sugar dehydrogenase, UD 99.6 7.7E-14 2.6E-18 146.5 18.2 200 309-522 3-247 (450)
124 1vpd_A Tartronate semialdehyde 99.6 1.9E-14 6.6E-19 143.5 12.8 187 309-522 6-210 (299)
125 2gf2_A Hibadh, 3-hydroxyisobut 99.6 3.2E-15 1.1E-19 148.9 7.1 182 310-523 2-206 (296)
126 2q3e_A UDP-glucose 6-dehydroge 99.5 2.3E-14 7.8E-19 151.7 13.7 204 308-522 5-256 (467)
127 3b1f_A Putative prephenate deh 99.5 2.9E-14 9.9E-19 141.6 13.5 158 307-488 5-181 (290)
128 2ahr_A Putative pyrroline carb 99.5 5.4E-14 1.9E-18 137.2 15.1 185 308-522 3-197 (259)
129 2ew2_A 2-dehydropantoate 2-red 99.5 1.5E-13 5E-18 137.9 18.2 201 308-522 3-249 (316)
130 1yb4_A Tartronic semialdehyde 99.5 9.8E-15 3.3E-19 145.3 8.1 183 308-522 3-207 (295)
131 3k96_A Glycerol-3-phosphate de 99.5 1.2E-13 4E-18 140.8 15.4 200 304-518 25-261 (356)
132 2o3j_A UDP-glucose 6-dehydroge 99.5 1.2E-13 4.1E-18 146.6 15.9 203 306-522 7-262 (481)
133 2g5c_A Prephenate dehydrogenas 99.5 2.5E-13 8.4E-18 134.2 16.4 155 308-488 1-173 (281)
134 4gwg_A 6-phosphogluconate dehy 99.5 5E-14 1.7E-18 148.2 11.9 192 307-522 3-221 (484)
135 2zyd_A 6-phosphogluconate dehy 99.5 6.3E-14 2.1E-18 148.4 12.7 190 308-522 15-231 (480)
136 2p4q_A 6-phosphogluconate dehy 99.5 3.1E-14 1E-18 151.2 9.9 190 309-522 11-226 (497)
137 2f1k_A Prephenate dehydrogenas 99.5 3E-13 1E-17 133.4 15.7 153 310-488 2-167 (279)
138 1mv8_A GMD, GDP-mannose 6-dehy 99.5 7.2E-14 2.5E-18 146.7 11.8 199 310-522 2-245 (436)
139 2cvz_A Dehydrogenase, 3-hydrox 99.5 6.6E-14 2.3E-18 138.8 10.7 185 308-522 1-200 (289)
140 2f9i_A Acetyl-coenzyme A carbo 99.5 2.4E-13 8.3E-18 135.5 14.3 138 26-186 139-276 (327)
141 3vtf_A UDP-glucose 6-dehydroge 99.5 4E-13 1.4E-17 139.1 15.5 201 307-527 20-271 (444)
142 4huj_A Uncharacterized protein 99.5 6.9E-14 2.3E-18 133.1 9.0 154 306-488 21-198 (220)
143 2rcy_A Pyrroline carboxylate r 99.5 2.4E-13 8.3E-18 132.8 13.0 179 309-522 5-198 (262)
144 2iz1_A 6-phosphogluconate dehy 99.5 3.9E-13 1.3E-17 142.4 14.8 190 308-522 5-222 (474)
145 2f9y_A Acetyl-COA carboxylase, 99.4 4.4E-13 1.5E-17 134.0 13.2 138 26-186 153-290 (339)
146 1i36_A Conserved hypothetical 99.4 8.6E-13 3E-17 129.0 13.2 173 310-522 2-193 (264)
147 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.4 7.1E-13 2.4E-17 140.4 12.9 193 310-523 3-221 (478)
148 2pv7_A T-protein [includes: ch 99.4 7.2E-13 2.4E-17 132.0 11.6 140 307-488 20-166 (298)
149 2pgd_A 6-phosphogluconate dehy 99.4 8.5E-13 2.9E-17 140.1 9.9 191 309-523 3-220 (482)
150 1np3_A Ketol-acid reductoisome 99.4 1.3E-12 4.6E-17 132.3 10.7 181 309-518 17-223 (338)
151 1jay_A Coenzyme F420H2:NADP+ o 99.4 2E-12 6.8E-17 122.1 10.7 156 310-488 2-181 (212)
152 3dtt_A NADP oxidoreductase; st 99.4 1.6E-12 5.4E-17 125.8 10.0 165 308-489 19-214 (245)
153 3ctv_A HBD-10, 3-hydroxyacyl-C 99.3 3.4E-13 1.2E-17 113.3 4.1 62 478-539 3-67 (110)
154 1evy_A Glycerol-3-phosphate de 99.3 1.9E-12 6.6E-17 132.8 8.7 197 308-518 15-255 (366)
155 1dlj_A UDP-glucose dehydrogena 99.3 1.1E-11 3.9E-16 128.4 14.5 200 310-522 2-239 (402)
156 2raf_A Putative dinucleotide-b 99.3 5.6E-12 1.9E-16 118.8 8.6 134 308-488 19-176 (209)
157 2vns_A Metalloreductase steap3 99.3 3.9E-12 1.3E-16 120.5 7.2 148 307-488 27-194 (215)
158 1yj8_A Glycerol-3-phosphate de 99.3 5.6E-12 1.9E-16 129.8 8.3 196 308-518 21-273 (375)
159 1x0v_A GPD-C, GPDH-C, glycerol 99.3 6.6E-12 2.3E-16 128.2 8.0 197 308-518 8-257 (354)
160 2qyt_A 2-dehydropantoate 2-red 99.3 1.7E-11 6E-16 122.9 10.9 202 307-522 7-257 (317)
161 1ks9_A KPA reductase;, 2-dehyd 99.2 5E-12 1.7E-16 125.1 6.8 186 310-518 2-227 (291)
162 1z82_A Glycerol-3-phosphate de 99.2 4.3E-11 1.5E-15 121.2 13.3 187 309-518 15-236 (335)
163 1txg_A Glycerol-3-phosphate de 99.2 3.1E-11 1.1E-15 122.1 9.6 191 310-518 2-242 (335)
164 3fr7_A Putative ketol-acid red 99.2 4.9E-11 1.7E-15 122.8 9.3 154 308-484 54-232 (525)
165 3ghy_A Ketopantoate reductase 99.1 2.6E-10 8.8E-15 115.4 13.0 169 308-491 3-201 (335)
166 2hjr_A Malate dehydrogenase; m 99.1 1.1E-10 3.6E-15 117.6 10.1 122 309-444 15-155 (328)
167 3hwr_A 2-dehydropantoate 2-red 99.1 5.1E-10 1.8E-14 112.3 13.8 165 307-491 18-192 (318)
168 1t2d_A LDH-P, L-lactate dehydr 99.1 2.2E-10 7.7E-15 114.8 10.0 123 308-444 4-150 (322)
169 2yjz_A Metalloreductase steap4 98.7 1E-11 3.5E-16 116.1 0.0 148 309-488 20-182 (201)
170 1pzg_A LDH, lactate dehydrogen 99.1 2.1E-10 7.2E-15 115.6 8.4 123 308-444 9-156 (331)
171 2cby_A ATP-dependent CLP prote 99.1 3E-10 1E-14 106.5 8.8 141 27-191 35-198 (208)
172 1a5z_A L-lactate dehydrogenase 99.0 8.8E-10 3E-14 110.6 11.1 140 309-481 1-159 (319)
173 3hn2_A 2-dehydropantoate 2-red 99.0 4.6E-09 1.6E-13 105.1 14.8 165 309-489 3-179 (312)
174 2i6t_A Ubiquitin-conjugating e 99.0 6.1E-10 2.1E-14 110.5 8.0 122 304-444 10-149 (303)
175 3i83_A 2-dehydropantoate 2-red 98.9 8.7E-09 3E-13 103.4 12.2 167 309-490 3-182 (320)
176 1ur5_A Malate dehydrogenase; o 98.9 3.5E-09 1.2E-13 105.6 8.6 121 309-444 3-143 (309)
177 2v6b_A L-LDH, L-lactate dehydr 98.8 2.5E-09 8.4E-14 106.5 6.6 119 309-444 1-138 (304)
178 2w2k_A D-mandelate dehydrogena 98.8 1.7E-09 5.9E-14 109.6 5.3 117 309-449 164-285 (348)
179 2gcg_A Glyoxylate reductase/hy 98.8 1.8E-09 6.2E-14 108.8 4.2 117 309-450 156-276 (330)
180 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 1.8E-08 6.3E-13 100.5 10.7 122 308-444 1-146 (309)
181 2d4a_B Malate dehydrogenase; a 98.8 1.5E-08 5.2E-13 100.8 9.0 120 310-444 1-140 (308)
182 3tl2_A Malate dehydrogenase; c 98.7 3.1E-08 1.1E-12 98.6 10.9 107 304-423 4-127 (315)
183 3gvi_A Malate dehydrogenase; N 98.7 2.9E-08 9.8E-13 99.2 10.4 104 307-423 6-124 (324)
184 1bg6_A N-(1-D-carboxylethyl)-L 98.7 2E-08 6.9E-13 102.2 9.6 104 308-423 4-109 (359)
185 1guz_A Malate dehydrogenase; o 98.7 4.4E-08 1.5E-12 97.7 11.8 99 309-419 1-115 (310)
186 2dbq_A Glyoxylate reductase; D 98.7 3.1E-09 1.1E-13 107.2 3.0 114 309-448 151-268 (334)
187 2d0i_A Dehydrogenase; structur 98.7 5.7E-09 1.9E-13 105.1 4.5 113 309-448 147-263 (333)
188 1lld_A L-lactate dehydrogenase 98.7 6.2E-08 2.1E-12 97.1 11.6 123 308-444 7-148 (319)
189 3p7m_A Malate dehydrogenase; p 98.7 2.4E-08 8.2E-13 99.8 8.4 103 307-422 4-121 (321)
190 3ba1_A HPPR, hydroxyphenylpyru 98.7 4.4E-09 1.5E-13 105.7 1.8 111 309-448 165-279 (333)
191 3ldh_A Lactate dehydrogenase; 98.7 5.6E-08 1.9E-12 96.9 9.8 103 307-423 20-138 (330)
192 3c7a_A Octopine dehydrogenase; 98.6 2.8E-08 9.6E-13 103.1 7.4 106 309-427 3-120 (404)
193 1ygy_A PGDH, D-3-phosphoglycer 98.6 1.7E-08 5.8E-13 108.1 5.0 149 309-483 143-308 (529)
194 3gvx_A Glycerate dehydrogenase 98.6 8.8E-09 3E-13 101.2 2.1 124 309-461 123-255 (290)
195 4fgw_A Glycerol-3-phosphate de 98.6 5.5E-09 1.9E-13 106.5 0.4 110 308-427 34-155 (391)
196 1gdh_A D-glycerate dehydrogena 98.6 6.2E-08 2.1E-12 96.9 7.9 141 309-474 147-300 (320)
197 1ldn_A L-lactate dehydrogenase 98.6 8.6E-08 2.9E-12 95.8 8.7 99 307-418 5-119 (316)
198 1oju_A MDH, malate dehydrogena 98.6 1.6E-07 5.5E-12 92.5 10.3 102 309-423 1-118 (294)
199 1obb_A Maltase, alpha-glucosid 98.6 1.9E-07 6.5E-12 97.8 11.3 76 309-396 4-86 (480)
200 3ego_A Probable 2-dehydropanto 98.6 2.3E-07 7.8E-12 92.5 10.9 110 309-436 3-113 (307)
201 2f6i_A ATP-dependent CLP prote 98.6 2.4E-07 8.2E-12 86.9 10.2 138 27-186 47-203 (215)
202 3qwd_A ATP-dependent CLP prote 98.5 3.7E-07 1.3E-11 84.6 10.2 137 27-187 35-193 (203)
203 3g17_A Similar to 2-dehydropan 98.5 2.5E-08 8.6E-13 98.8 2.4 185 309-522 3-226 (294)
204 1qp8_A Formate dehydrogenase; 98.5 2.4E-07 8.3E-12 91.8 8.4 125 309-463 125-262 (303)
205 1yg6_A ATP-dependent CLP prote 98.5 1.9E-07 6.5E-12 86.3 6.8 136 27-186 34-191 (193)
206 1wwk_A Phosphoglycerate dehydr 98.5 2.7E-07 9.2E-12 91.8 8.4 93 309-427 143-236 (307)
207 3pqe_A L-LDH, L-lactate dehydr 98.5 3.9E-07 1.3E-11 91.1 9.4 103 306-423 3-122 (326)
208 3nep_X Malate dehydrogenase; h 98.5 3.8E-07 1.3E-11 90.7 9.1 102 309-423 1-118 (314)
209 1u8x_X Maltose-6'-phosphate gl 98.5 6E-07 2E-11 94.1 11.0 123 309-444 29-193 (472)
210 4dgs_A Dehydrogenase; structur 98.4 1E-07 3.6E-12 95.7 4.6 111 309-448 172-286 (340)
211 3jtm_A Formate dehydrogenase, 98.4 7.6E-08 2.6E-12 97.2 3.6 103 309-435 165-270 (351)
212 3evt_A Phosphoglycerate dehydr 98.4 3E-08 1E-12 99.1 0.5 113 309-447 138-254 (324)
213 4aj2_A L-lactate dehydrogenase 98.4 3.9E-07 1.3E-11 91.2 8.5 104 306-423 17-136 (331)
214 1tg6_A Putative ATP-dependent 98.4 5.4E-07 1.9E-11 87.0 9.0 137 27-187 90-248 (277)
215 4g2n_A D-isomer specific 2-hyd 98.4 1E-07 3.5E-12 96.0 3.8 101 309-435 174-277 (345)
216 3gg9_A D-3-phosphoglycerate de 98.4 9.8E-08 3.4E-12 96.5 3.4 94 309-427 161-255 (352)
217 1zcj_A Peroxisomal bifunctiona 98.4 1.6E-07 5.5E-12 98.9 5.0 76 462-539 330-411 (463)
218 2w3p_A Benzoyl-COA-dihydrodiol 98.4 2.6E-06 8.8E-11 89.0 13.2 200 3-210 265-499 (556)
219 3k5p_A D-3-phosphoglycerate de 98.4 3.6E-07 1.2E-11 93.8 6.8 100 309-436 157-259 (416)
220 3fef_A Putative glucosidase LP 98.4 8.5E-07 2.9E-11 92.1 9.4 72 309-396 6-84 (450)
221 2cuk_A Glycerate dehydrogenase 98.4 5.2E-07 1.8E-11 89.8 7.5 124 309-463 145-279 (311)
222 4hy3_A Phosphoglycerate oxidor 98.3 8E-07 2.7E-11 89.9 8.6 137 309-471 177-325 (365)
223 2pi1_A D-lactate dehydrogenase 98.3 1.5E-07 5E-12 94.6 3.1 101 309-436 142-245 (334)
224 3hg7_A D-isomer specific 2-hyd 98.3 2.8E-08 9.5E-13 99.2 -2.2 101 309-435 141-244 (324)
225 3pp8_A Glyoxylate/hydroxypyruv 98.3 4.2E-08 1.4E-12 97.7 -0.9 101 309-435 140-243 (315)
226 2g76_A 3-PGDH, D-3-phosphoglyc 98.3 2.6E-07 9E-12 92.7 4.7 101 309-435 166-269 (335)
227 2x0j_A Malate dehydrogenase; o 98.3 1.9E-06 6.3E-11 84.7 10.2 104 309-425 1-120 (294)
228 4e5n_A Thermostable phosphite 98.3 2.9E-07 9.8E-12 92.4 4.4 102 309-435 146-250 (330)
229 3d0o_A L-LDH 1, L-lactate dehy 98.3 2.1E-06 7E-11 85.8 10.6 107 309-431 7-129 (317)
230 2nac_A NAD-dependent formate d 98.3 2.1E-07 7.1E-12 95.2 3.3 104 309-436 192-298 (393)
231 2ekl_A D-3-phosphoglycerate de 98.3 2.2E-07 7.5E-12 92.6 2.9 102 309-436 143-247 (313)
232 1mx3_A CTBP1, C-terminal bindi 98.3 2.4E-07 8.1E-12 93.5 2.9 102 309-435 169-273 (347)
233 2j6i_A Formate dehydrogenase; 98.3 2.1E-07 7.1E-12 94.7 2.5 103 309-435 165-271 (364)
234 2i99_A MU-crystallin homolog; 98.3 8.6E-07 2.9E-11 88.4 6.6 90 309-425 136-228 (312)
235 1j4a_A D-LDH, D-lactate dehydr 98.3 4.5E-07 1.5E-11 91.2 4.3 100 309-435 147-249 (333)
236 1sc6_A PGDH, D-3-phosphoglycer 98.3 4.8E-07 1.6E-11 93.2 4.5 99 309-435 146-247 (404)
237 3p2l_A ATP-dependent CLP prote 98.3 1.2E-06 4.1E-11 81.0 6.8 139 27-189 38-199 (201)
238 1y6j_A L-lactate dehydrogenase 98.2 8.4E-07 2.9E-11 88.7 6.1 119 308-444 7-147 (318)
239 2yq5_A D-isomer specific 2-hyd 98.2 2.2E-07 7.5E-12 93.4 1.5 99 309-435 149-250 (343)
240 1s6y_A 6-phospho-beta-glucosid 98.2 3.9E-06 1.3E-10 87.5 10.8 123 309-444 8-174 (450)
241 3llv_A Exopolyphosphatase-rela 98.2 7.7E-06 2.6E-10 71.2 10.9 105 308-430 6-111 (141)
242 1pix_A Glutaconyl-COA decarbox 98.2 1.1E-05 3.9E-10 86.0 13.3 161 25-205 118-287 (587)
243 1lss_A TRK system potassium up 98.2 1.2E-05 4E-10 69.5 11.0 97 309-422 5-102 (140)
244 1ez4_A Lactate dehydrogenase; 98.2 5.1E-06 1.8E-10 82.9 9.7 104 309-429 6-125 (318)
245 3vku_A L-LDH, L-lactate dehydr 98.2 2.5E-06 8.6E-11 85.1 7.4 101 307-423 8-125 (326)
246 2xxj_A L-LDH, L-lactate dehydr 98.1 4.4E-06 1.5E-10 83.1 8.7 104 309-429 1-120 (310)
247 3fi9_A Malate dehydrogenase; s 98.1 2.5E-06 8.7E-11 85.7 6.9 95 308-417 8-120 (343)
248 2zqz_A L-LDH, L-lactate dehydr 98.1 6.6E-06 2.3E-10 82.3 9.7 103 309-429 10-129 (326)
249 3oj0_A Glutr, glutamyl-tRNA re 98.1 9.4E-07 3.2E-11 77.5 2.8 87 309-422 22-109 (144)
250 3oet_A Erythronate-4-phosphate 98.1 6.5E-07 2.2E-11 90.8 1.5 110 309-447 120-237 (381)
251 1dxy_A D-2-hydroxyisocaproate 98.1 8.4E-07 2.9E-11 89.1 2.1 100 309-436 146-248 (333)
252 2o4c_A Erythronate-4-phosphate 98.0 7.3E-07 2.5E-11 90.7 0.9 98 309-435 117-221 (380)
253 4gm2_A ATP-dependent CLP prote 98.0 2.1E-05 7.2E-10 72.5 9.5 142 27-187 36-205 (205)
254 3fwz_A Inner membrane protein 98.0 2.3E-05 7.7E-10 68.2 9.3 96 309-420 8-103 (140)
255 1xdw_A NAD+-dependent (R)-2-hy 98.0 1.1E-06 3.6E-11 88.4 0.5 99 309-435 147-248 (331)
256 2hk9_A Shikimate dehydrogenase 98.0 6.1E-06 2.1E-10 80.7 5.9 91 309-424 130-222 (275)
257 3c85_A Putative glutathione-re 98.0 2.9E-05 1E-09 70.7 9.8 39 309-347 40-79 (183)
258 3ic5_A Putative saccharopine d 97.9 1.5E-05 5.2E-10 66.5 6.8 40 308-347 5-45 (118)
259 2rir_A Dipicolinate synthase, 97.9 1.3E-05 4.3E-10 79.5 6.3 89 309-424 158-247 (300)
260 1y81_A Conserved hypothetical 97.9 2.6E-05 8.8E-10 67.7 7.5 82 308-421 14-100 (138)
261 3d4o_A Dipicolinate synthase s 97.9 2.8E-05 9.5E-10 76.7 8.7 89 309-424 156-245 (293)
262 3bf0_A Protease 4; bacterial, 97.9 7.3E-05 2.5E-09 80.8 12.4 146 32-196 71-273 (593)
263 1mld_A Malate dehydrogenase; o 97.9 8E-05 2.7E-09 74.1 11.5 92 310-419 2-114 (314)
264 2hmt_A YUAA protein; RCK, KTN, 97.8 3.6E-05 1.2E-09 66.6 7.6 40 308-347 6-45 (144)
265 2g1u_A Hypothetical protein TM 97.8 2.7E-05 9.2E-10 69.0 6.7 39 309-347 20-58 (155)
266 2d5c_A AROE, shikimate 5-dehyd 97.8 3.3E-05 1.1E-09 74.8 7.8 65 310-399 118-183 (263)
267 1o6z_A MDH, malate dehydrogena 97.8 7.9E-05 2.7E-09 73.7 10.6 119 309-444 1-143 (303)
268 1smk_A Malate dehydrogenase, g 97.7 7.6E-05 2.6E-09 74.7 9.4 101 309-430 9-130 (326)
269 2duw_A Putative COA-binding pr 97.7 3.6E-05 1.2E-09 67.5 5.8 85 309-426 14-105 (145)
270 1x7d_A Ornithine cyclodeaminas 97.7 6.6E-05 2.2E-09 75.8 8.1 96 309-425 130-228 (350)
271 3l4b_C TRKA K+ channel protien 97.7 0.00015 5.2E-09 68.0 9.7 95 309-420 1-97 (218)
272 1b8p_A Protein (malate dehydro 97.7 6.1E-05 2.1E-09 75.5 7.2 101 309-423 6-133 (329)
273 3d64_A Adenosylhomocysteinase; 97.7 2.6E-05 9.1E-10 81.6 4.6 88 309-425 278-366 (494)
274 1v8b_A Adenosylhomocysteinase; 97.6 2.4E-05 8.2E-10 81.7 3.9 88 309-425 258-346 (479)
275 2f9i_B Acetyl-coenzyme A carbo 97.6 0.002 6.9E-08 62.6 16.5 155 15-200 123-280 (285)
276 3ce6_A Adenosylhomocysteinase; 97.6 0.0001 3.4E-09 77.5 7.5 87 309-424 275-362 (494)
277 1up7_A 6-phospho-beta-glucosid 97.6 0.00033 1.1E-08 72.2 11.1 119 309-444 3-163 (417)
278 1omo_A Alanine dehydrogenase; 97.6 0.00013 4.5E-09 72.8 7.9 90 309-424 126-218 (322)
279 3e9m_A Oxidoreductase, GFO/IDH 97.6 0.0002 6.9E-09 71.7 9.3 73 307-401 4-81 (330)
280 3h9u_A Adenosylhomocysteinase; 97.6 5.4E-05 1.8E-09 77.6 5.0 88 309-425 212-300 (436)
281 3q2i_A Dehydrogenase; rossmann 97.5 0.00039 1.3E-08 70.3 11.1 72 306-400 11-88 (354)
282 2dc1_A L-aspartate dehydrogena 97.5 8.5E-05 2.9E-09 70.7 5.6 78 310-424 2-82 (236)
283 3p2y_A Alanine dehydrogenase/p 97.5 5.1E-05 1.7E-09 76.8 3.4 104 309-423 185-302 (381)
284 3hdj_A Probable ornithine cycl 97.4 9.3E-05 3.2E-09 73.5 5.1 91 309-425 122-215 (313)
285 3kb6_A D-lactate dehydrogenase 97.4 0.0001 3.5E-09 73.8 5.3 101 309-436 142-245 (334)
286 3iav_A Propionyl-COA carboxyla 97.4 0.0031 1.1E-07 66.4 16.7 153 12-200 95-258 (530)
287 4dio_A NAD(P) transhydrogenase 97.4 5.9E-05 2E-09 76.9 3.5 110 309-423 191-312 (405)
288 3euw_A MYO-inositol dehydrogen 97.4 0.00036 1.2E-08 70.2 9.3 96 308-430 4-104 (344)
289 3uuw_A Putative oxidoreductase 97.4 0.00034 1.2E-08 69.3 9.0 71 308-401 6-80 (308)
290 1hye_A L-lactate/malate dehydr 97.4 0.00053 1.8E-08 68.1 10.2 101 309-423 1-122 (313)
291 3n6r_B Propionyl-COA carboxyla 97.4 0.0038 1.3E-07 65.6 16.8 146 17-198 108-264 (531)
292 3u95_A Glycoside hydrolase, fa 97.4 0.00026 8.9E-09 74.3 8.0 75 309-395 1-84 (477)
293 3gvp_A Adenosylhomocysteinase 97.4 0.00054 1.9E-08 70.0 9.9 88 309-425 221-309 (435)
294 3ulk_A Ketol-acid reductoisome 97.4 0.00034 1.2E-08 71.0 8.0 151 309-482 38-201 (491)
295 1id1_A Putative potassium chan 97.4 0.00076 2.6E-08 59.3 9.4 39 309-347 4-43 (153)
296 3hhp_A Malate dehydrogenase; M 97.4 0.0004 1.4E-08 68.8 8.3 97 309-423 1-118 (312)
297 1tlt_A Putative oxidoreductase 97.3 0.00032 1.1E-08 69.8 7.7 71 307-400 4-78 (319)
298 3qy9_A DHPR, dihydrodipicolina 97.3 0.00046 1.6E-08 65.7 8.2 86 308-429 3-89 (243)
299 2egg_A AROE, shikimate 5-dehyd 97.3 0.00011 3.8E-09 72.4 3.9 41 309-349 142-183 (297)
300 2vhw_A Alanine dehydrogenase; 97.3 8.2E-05 2.8E-09 76.0 3.0 98 309-423 169-268 (377)
301 3db2_A Putative NADPH-dependen 97.3 0.00073 2.5E-08 68.3 9.9 70 309-401 6-80 (354)
302 4hkt_A Inositol 2-dehydrogenas 97.3 0.00061 2.1E-08 68.1 9.3 95 308-430 3-102 (331)
303 3u62_A Shikimate dehydrogenase 97.3 4.2E-05 1.4E-09 73.6 0.6 38 310-347 110-148 (253)
304 4h7p_A Malate dehydrogenase; s 97.3 0.00041 1.4E-08 69.6 7.8 103 309-425 25-152 (345)
305 3n58_A Adenosylhomocysteinase; 97.3 0.00038 1.3E-08 71.3 7.6 86 309-423 248-334 (464)
306 3o8q_A Shikimate 5-dehydrogena 97.3 0.00019 6.4E-09 70.1 5.1 71 309-399 127-199 (281)
307 3rc1_A Sugar 3-ketoreductase; 97.2 0.0007 2.4E-08 68.3 8.9 74 305-401 24-103 (350)
308 2z2v_A Hypothetical protein PH 97.2 0.00021 7.3E-09 72.5 5.0 92 308-423 16-108 (365)
309 3phh_A Shikimate dehydrogenase 97.2 0.00035 1.2E-08 67.5 6.1 65 309-398 119-183 (269)
310 1iuk_A Hypothetical protein TT 97.2 0.00047 1.6E-08 59.9 6.2 82 309-420 14-100 (140)
311 2eez_A Alanine dehydrogenase; 97.2 0.00018 6.3E-09 73.2 4.1 98 309-423 167-266 (369)
312 2bzr_A Propionyl-COA carboxyla 97.2 0.012 4.1E-07 62.3 17.9 145 17-199 111-268 (548)
313 3ezy_A Dehydrogenase; structur 97.2 0.00092 3.1E-08 67.2 9.0 70 309-400 3-77 (344)
314 1on3_A Methylmalonyl-COA carbo 97.2 0.01 3.6E-07 62.5 17.2 147 18-200 99-255 (523)
315 1xea_A Oxidoreductase, GFO/IDH 97.2 0.0017 5.9E-08 64.6 10.7 70 309-400 3-76 (323)
316 3u9r_B MCC beta, methylcrotony 97.2 0.02 6.8E-07 60.5 19.1 150 18-199 125-285 (555)
317 1p77_A Shikimate 5-dehydrogena 97.1 0.00049 1.7E-08 66.9 6.2 42 309-350 120-161 (272)
318 3e18_A Oxidoreductase; dehydro 97.1 0.0012 4.2E-08 66.8 9.1 70 308-401 5-79 (359)
319 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.001 3.5E-08 66.3 8.4 70 309-400 2-75 (325)
320 3c1a_A Putative oxidoreductase 97.1 0.00089 3E-08 66.4 7.8 68 308-400 10-82 (315)
321 1npy_A Hypothetical shikimate 97.1 0.0012 4.2E-08 63.9 8.3 67 309-399 120-187 (271)
322 1x0u_A Hypothetical methylmalo 97.1 0.016 5.6E-07 61.1 17.4 153 13-201 90-254 (522)
323 1leh_A Leucine dehydrogenase; 97.1 0.001 3.4E-08 67.3 7.8 40 309-348 174-213 (364)
324 3k6j_A Protein F01G10.3, confi 97.0 0.00031 1.1E-08 73.1 4.0 50 490-539 355-410 (460)
325 3cea_A MYO-inositol 2-dehydrog 97.0 0.002 6.9E-08 64.7 9.9 72 307-400 7-84 (346)
326 3l9w_A Glutathione-regulated p 97.0 0.0021 7.1E-08 66.3 10.0 40 309-348 5-44 (413)
327 1nyt_A Shikimate 5-dehydrogena 97.0 0.00097 3.3E-08 64.7 7.1 41 309-349 120-160 (271)
328 2d59_A Hypothetical protein PH 97.0 0.0018 6.2E-08 56.4 8.1 80 309-420 23-107 (144)
329 2glx_A 1,5-anhydro-D-fructose 97.0 0.0024 8.2E-08 63.7 10.1 69 310-400 2-75 (332)
330 3mz0_A Inositol 2-dehydrogenas 97.0 0.0016 5.4E-08 65.5 8.6 72 309-401 3-80 (344)
331 1gpj_A Glutamyl-tRNA reductase 97.0 0.00053 1.8E-08 70.6 5.0 71 309-400 168-240 (404)
332 5mdh_A Malate dehydrogenase; o 96.9 0.00038 1.3E-08 69.6 3.4 98 309-420 4-126 (333)
333 3ec7_A Putative dehydrogenase; 96.9 0.0023 7.9E-08 64.7 9.2 73 307-401 22-101 (357)
334 3ond_A Adenosylhomocysteinase; 96.9 0.002 6.8E-08 67.1 8.8 88 309-424 266-353 (488)
335 3jyo_A Quinate/shikimate dehyd 96.9 0.00083 2.8E-08 65.6 5.2 43 309-351 128-171 (283)
336 3pwz_A Shikimate dehydrogenase 96.9 0.0018 6.2E-08 62.7 7.5 42 309-350 121-163 (272)
337 3evn_A Oxidoreductase, GFO/IDH 96.9 0.0009 3.1E-08 66.9 5.5 73 307-401 4-81 (329)
338 3don_A Shikimate dehydrogenase 96.8 0.00013 4.5E-09 70.9 -0.8 38 309-346 118-156 (277)
339 7mdh_A Protein (malate dehydro 96.8 0.0023 8E-08 64.5 8.1 107 308-424 32-159 (375)
340 3bio_A Oxidoreductase, GFO/IDH 96.8 0.0026 9E-08 62.8 8.3 84 309-422 10-95 (304)
341 3zwc_A Peroxisomal bifunctiona 96.7 0.00075 2.6E-08 74.5 4.1 47 493-539 638-690 (742)
342 1x0u_A Hypothetical methylmalo 96.7 0.01 3.4E-07 62.7 12.4 164 18-203 329-508 (522)
343 1ydw_A AX110P-like protein; st 96.7 0.0041 1.4E-07 62.9 9.2 74 308-400 6-84 (362)
344 1x13_A NAD(P) transhydrogenase 96.7 0.00066 2.3E-08 69.8 3.2 39 309-347 173-211 (401)
345 3abi_A Putative uncharacterize 96.7 0.0014 4.8E-08 66.5 5.6 73 308-399 16-89 (365)
346 2p2s_A Putative oxidoreductase 96.7 0.0018 6.3E-08 64.8 6.3 71 309-401 5-80 (336)
347 3m2t_A Probable dehydrogenase; 96.7 0.0016 5.4E-08 66.0 5.8 71 308-400 5-81 (359)
348 1jw9_B Molybdopterin biosynthe 96.7 0.0019 6.6E-08 61.8 6.0 33 309-341 32-65 (249)
349 1h6d_A Precursor form of gluco 96.7 0.007 2.4E-07 62.8 10.6 78 306-401 81-164 (433)
350 3e8x_A Putative NAD-dependent 96.6 0.012 4E-07 55.3 11.2 70 309-396 22-93 (236)
351 1pjc_A Protein (L-alanine dehy 96.6 0.0013 4.3E-08 66.8 4.6 98 309-423 168-267 (361)
352 1nvt_A Shikimate 5'-dehydrogen 96.6 0.0024 8.2E-08 62.5 6.4 75 309-397 129-203 (287)
353 4had_A Probable oxidoreductase 96.6 0.0028 9.4E-08 63.8 7.0 74 306-401 21-100 (350)
354 3ius_A Uncharacterized conserv 96.6 0.0051 1.7E-07 59.6 8.6 40 308-347 5-44 (286)
355 1wdk_A Fatty oxidation complex 96.6 0.001 3.5E-08 73.5 3.7 50 490-539 624-679 (715)
356 2wtb_A MFP2, fatty acid multif 96.6 0.001 3.5E-08 73.6 3.6 50 490-539 624-679 (725)
357 3ohs_X Trans-1,2-dihydrobenzen 96.5 0.0066 2.3E-07 60.6 9.1 71 309-401 3-80 (334)
358 3fbt_A Chorismate mutase and s 96.5 0.0018 6.2E-08 63.0 4.6 39 309-347 123-162 (282)
359 1l7d_A Nicotinamide nucleotide 96.5 0.0016 5.3E-08 66.7 4.0 39 309-347 173-211 (384)
360 1ff9_A Saccharopine reductase; 96.4 0.0014 4.7E-08 68.5 3.3 40 308-347 3-42 (450)
361 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.014 4.9E-07 54.5 9.8 129 309-478 32-163 (223)
362 3tum_A Shikimate dehydrogenase 96.4 0.0064 2.2E-07 58.7 7.7 70 309-396 126-196 (269)
363 4g65_A TRK system potassium up 96.4 0.0017 5.8E-08 68.0 3.5 41 309-349 4-44 (461)
364 1vrg_A Propionyl-COA carboxyla 96.3 0.05 1.7E-06 57.4 14.7 166 18-203 334-513 (527)
365 3r6d_A NAD-dependent epimerase 96.3 0.0048 1.6E-07 57.4 6.3 40 308-347 5-47 (221)
366 1f06_A MESO-diaminopimelate D- 96.3 0.0029 1E-07 62.9 4.8 65 309-400 4-71 (320)
367 3tnl_A Shikimate dehydrogenase 96.2 0.006 2.1E-07 60.3 6.6 43 309-351 155-201 (315)
368 4gqa_A NAD binding oxidoreduct 96.2 0.0034 1.2E-07 64.7 5.0 70 310-401 28-110 (412)
369 4ina_A Saccharopine dehydrogen 96.2 0.0055 1.9E-07 63.0 6.5 44 308-351 1-47 (405)
370 2axq_A Saccharopine dehydrogen 96.2 0.0028 9.5E-08 66.4 4.2 41 307-347 22-63 (467)
371 1vrg_A Propionyl-COA carboxyla 96.2 0.087 3E-06 55.5 15.6 139 25-199 111-258 (527)
372 3u3x_A Oxidoreductase; structu 96.2 0.028 9.6E-07 56.7 11.4 70 309-400 27-101 (361)
373 2aef_A Calcium-gated potassium 96.2 0.0082 2.8E-07 56.6 7.0 38 309-347 10-47 (234)
374 3h2s_A Putative NADH-flavin re 96.2 0.0024 8.2E-08 59.5 3.1 37 310-346 2-39 (224)
375 3eag_A UDP-N-acetylmuramate:L- 96.1 0.015 5E-07 58.0 8.9 35 307-341 3-38 (326)
376 2ixa_A Alpha-N-acetylgalactosa 96.1 0.0079 2.7E-07 62.6 7.1 77 307-400 19-104 (444)
377 4a26_A Putative C-1-tetrahydro 96.1 0.0063 2.2E-07 59.2 5.5 74 309-424 166-240 (300)
378 1y7t_A Malate dehydrogenase; N 96.0 0.019 6.4E-07 57.1 9.2 33 309-341 5-45 (327)
379 3upl_A Oxidoreductase; rossman 96.0 0.018 6E-07 59.5 9.1 153 309-487 24-190 (446)
380 1dih_A Dihydrodipicolinate red 96.0 0.008 2.7E-07 58.2 6.2 102 308-430 5-110 (273)
381 3ngx_A Bifunctional protein fo 96.0 0.0045 1.5E-07 59.4 4.2 73 309-425 151-224 (276)
382 4f3y_A DHPR, dihydrodipicolina 96.0 0.005 1.7E-07 59.5 4.5 103 306-430 5-111 (272)
383 3t4e_A Quinate/shikimate dehyd 96.0 0.0066 2.2E-07 59.9 5.5 42 309-350 149-194 (312)
384 3e82_A Putative oxidoreductase 96.0 0.0066 2.3E-07 61.5 5.6 69 308-401 7-81 (364)
385 2yyy_A Glyceraldehyde-3-phosph 96.0 0.032 1.1E-06 55.8 10.4 107 309-424 3-114 (343)
386 3gdo_A Uncharacterized oxidore 96.0 0.0064 2.2E-07 61.4 5.4 69 308-401 5-79 (358)
387 3moi_A Probable dehydrogenase; 95.9 0.013 4.4E-07 59.8 7.7 70 309-401 3-78 (387)
388 3gf3_A Glutaconyl-COA decarbox 95.9 0.16 5.5E-06 54.0 15.9 171 17-200 109-289 (588)
389 3dty_A Oxidoreductase, GFO/IDH 95.9 0.0093 3.2E-07 61.1 6.3 74 308-401 12-99 (398)
390 1on3_A Methylmalonyl-COA carbo 95.8 0.088 3E-06 55.5 13.6 166 18-203 330-509 (523)
391 1zh8_A Oxidoreductase; TM0312, 95.8 0.0084 2.9E-07 60.1 5.6 71 308-400 18-95 (340)
392 1a4i_A Methylenetetrahydrofola 95.8 0.011 3.8E-07 57.4 6.0 73 309-425 166-239 (301)
393 3dhn_A NAD-dependent epimerase 95.8 0.0039 1.3E-07 58.2 2.7 37 308-344 4-41 (227)
394 4hv4_A UDP-N-acetylmuramate--L 95.7 0.034 1.1E-06 58.7 10.0 38 305-342 19-57 (494)
395 3v5n_A Oxidoreductase; structu 95.7 0.016 5.5E-07 59.8 7.4 73 309-401 38-124 (417)
396 1zud_1 Adenylyltransferase THI 95.7 0.024 8.4E-07 54.0 8.1 33 309-341 29-62 (251)
397 3btv_A Galactose/lactose metab 95.7 0.011 3.8E-07 61.4 6.1 73 308-400 20-102 (438)
398 1edz_A 5,10-methylenetetrahydr 95.6 0.0094 3.2E-07 58.7 4.9 91 309-426 178-278 (320)
399 2nvw_A Galactose/lactose metab 95.6 0.011 3.7E-07 62.2 5.7 75 306-400 37-121 (479)
400 3p2o_A Bifunctional protein fo 95.6 0.011 3.9E-07 56.9 5.4 73 309-425 161-234 (285)
401 2bzr_A Propionyl-COA carboxyla 95.6 0.14 4.7E-06 54.2 13.9 164 18-201 351-532 (548)
402 1lu9_A Methylene tetrahydromet 95.5 0.02 6.9E-07 55.7 6.9 43 309-351 120-163 (287)
403 3qvo_A NMRA family protein; st 95.5 0.0066 2.2E-07 57.2 3.2 41 305-345 20-62 (236)
404 3l07_A Bifunctional protein fo 95.5 0.013 4.6E-07 56.4 5.3 72 309-424 162-234 (285)
405 1b0a_A Protein (fold bifunctio 95.5 0.0077 2.6E-07 58.1 3.6 72 309-424 160-232 (288)
406 3dqp_A Oxidoreductase YLBE; al 95.5 0.012 4.2E-07 54.4 5.0 35 310-344 2-37 (219)
407 4gmf_A Yersiniabactin biosynth 95.4 0.015 5.2E-07 58.9 5.9 67 309-399 8-78 (372)
408 2gas_A Isoflavone reductase; N 95.4 0.014 4.9E-07 56.9 5.4 34 308-341 2-36 (307)
409 3lk7_A UDP-N-acetylmuramoylala 95.4 0.046 1.6E-06 56.9 9.5 35 308-342 9-43 (451)
410 1pix_A Glutaconyl-COA decarbox 95.3 0.082 2.8E-06 56.4 11.2 158 26-205 385-564 (587)
411 3kux_A Putative oxidoreductase 95.3 0.019 6.5E-07 57.7 6.1 68 309-401 8-81 (352)
412 3c1o_A Eugenol synthase; pheny 95.3 0.02 6.8E-07 56.4 6.2 34 308-341 4-38 (321)
413 3iav_A Propionyl-COA carboxyla 95.3 0.18 6.1E-06 53.1 13.5 171 12-203 330-516 (530)
414 3f4l_A Putative oxidoreductase 95.3 0.0035 1.2E-07 63.0 0.5 70 309-401 3-79 (345)
415 2c2x_A Methylenetetrahydrofola 95.3 0.017 5.7E-07 55.6 5.1 72 309-424 159-233 (281)
416 3fhl_A Putative oxidoreductase 95.3 0.0057 2E-07 61.9 2.0 71 306-401 3-79 (362)
417 2b0j_A 5,10-methenyltetrahydro 95.2 0.23 7.8E-06 47.2 12.5 109 375-486 128-241 (358)
418 1y1p_A ARII, aldehyde reductas 95.2 0.078 2.7E-06 52.3 10.3 40 309-348 12-52 (342)
419 4a5o_A Bifunctional protein fo 95.2 0.017 5.9E-07 55.6 4.9 73 309-425 162-235 (286)
420 2vt3_A REX, redox-sensing tran 95.2 0.0054 1.8E-07 57.1 1.3 78 309-411 86-167 (215)
421 4fb5_A Probable oxidoreductase 95.1 0.018 6.2E-07 58.4 5.3 70 310-401 27-108 (393)
422 3n6r_B Propionyl-COA carboxyla 95.1 0.18 6.1E-06 53.0 12.7 164 18-201 342-515 (531)
423 3k8x_A Acetyl-COA carboxylase; 95.1 0.057 1.9E-06 58.6 9.1 82 97-203 245-334 (758)
424 2r6j_A Eugenol synthase 1; phe 95.0 0.015 5.3E-07 57.1 4.3 34 309-342 12-46 (318)
425 1cf2_P Protein (glyceraldehyde 95.0 0.027 9.4E-07 56.2 6.1 38 309-346 2-41 (337)
426 3kkj_A Amine oxidase, flavin-c 95.0 0.011 3.9E-07 55.4 3.1 32 310-341 4-35 (336)
427 3dr3_A N-acetyl-gamma-glutamyl 95.0 0.029 9.9E-07 55.9 6.2 100 308-428 4-111 (337)
428 2czc_A Glyceraldehyde-3-phosph 95.0 0.035 1.2E-06 55.4 6.6 86 309-400 3-92 (334)
429 1qyc_A Phenylcoumaran benzylic 94.9 0.023 7.9E-07 55.4 5.2 34 308-341 4-38 (308)
430 4h3v_A Oxidoreductase domain p 94.9 0.018 6.2E-07 58.4 4.5 70 310-401 8-89 (390)
431 3i6i_A Putative leucoanthocyan 94.9 0.045 1.5E-06 54.6 7.3 35 307-341 9-44 (346)
432 1vl6_A Malate oxidoreductase; 94.9 0.017 5.8E-07 58.1 4.1 32 309-340 193-225 (388)
433 3h8v_A Ubiquitin-like modifier 94.8 0.067 2.3E-06 52.1 8.1 33 309-341 37-70 (292)
434 4b4o_A Epimerase family protei 94.8 0.014 4.9E-07 56.9 3.4 34 309-342 1-35 (298)
435 4hb9_A Similarities with proba 94.8 0.013 4.5E-07 59.5 3.2 34 309-342 2-35 (412)
436 3fpf_A Mtnas, putative unchara 94.8 0.19 6.6E-06 48.8 11.2 94 309-422 124-221 (298)
437 3ff4_A Uncharacterized protein 94.7 0.039 1.3E-06 46.3 5.3 81 308-420 4-88 (122)
438 1qyd_A Pinoresinol-lariciresin 94.7 0.033 1.1E-06 54.5 5.7 34 308-341 4-38 (313)
439 3oqb_A Oxidoreductase; structu 94.7 0.02 6.9E-07 58.2 4.2 71 308-400 6-96 (383)
440 3ruf_A WBGU; rossmann fold, UD 94.7 0.025 8.5E-07 56.4 4.8 35 308-342 25-60 (351)
441 3l6e_A Oxidoreductase, short-c 94.7 0.03 1E-06 52.7 5.1 43 308-350 3-46 (235)
442 1nvm_B Acetaldehyde dehydrogen 94.6 0.06 2E-06 53.1 7.1 35 309-343 5-42 (312)
443 3oh8_A Nucleoside-diphosphate 94.6 0.038 1.3E-06 58.6 6.1 36 308-343 147-183 (516)
444 2ejw_A HDH, homoserine dehydro 94.5 0.022 7.5E-07 56.6 3.8 64 309-399 4-78 (332)
445 3do5_A HOM, homoserine dehydro 94.3 0.023 8E-07 56.4 3.5 36 308-343 2-47 (327)
446 1c1d_A L-phenylalanine dehydro 94.3 0.068 2.3E-06 53.5 6.9 35 309-343 176-210 (355)
447 4fn4_A Short chain dehydrogena 94.3 0.17 5.9E-06 48.1 9.4 42 310-351 8-51 (254)
448 2nu8_A Succinyl-COA ligase [AD 94.2 0.033 1.1E-06 54.3 4.5 91 309-429 8-102 (288)
449 2x24_A Acetyl-COA carboxylase; 94.2 0.12 4.2E-06 56.5 9.2 78 97-196 258-344 (793)
450 3h5n_A MCCB protein; ubiquitin 94.2 0.065 2.2E-06 53.8 6.6 32 310-341 120-152 (353)
451 2z1n_A Dehydrogenase; reductas 94.2 0.082 2.8E-06 50.3 7.1 43 309-351 8-51 (260)
452 1lnq_A MTHK channels, potassiu 94.2 0.041 1.4E-06 54.8 5.1 36 309-345 116-151 (336)
453 3l77_A Short-chain alcohol deh 94.2 0.075 2.6E-06 49.7 6.6 44 308-351 2-46 (235)
454 1b7g_O Protein (glyceraldehyde 94.2 0.072 2.5E-06 53.2 6.8 81 309-399 2-89 (340)
455 2wsb_A Galactitol dehydrogenas 94.1 0.047 1.6E-06 51.6 5.2 41 309-349 12-53 (254)
456 2ehd_A Oxidoreductase, oxidore 94.1 0.034 1.1E-06 52.0 4.0 40 309-348 6-46 (234)
457 3ged_A Short-chain dehydrogena 94.0 0.23 8E-06 47.0 9.8 39 309-347 2-42 (247)
458 3ew7_A LMO0794 protein; Q8Y8U8 94.0 0.046 1.6E-06 50.3 4.7 38 309-346 1-39 (221)
459 3o9z_A Lipopolysaccaride biosy 94.0 0.026 9E-07 55.7 3.2 36 308-343 3-40 (312)
460 1y8q_B Anthracycline-, ubiquit 94.0 0.04 1.4E-06 59.3 4.8 33 309-341 18-51 (640)
461 3ijp_A DHPR, dihydrodipicolina 94.0 0.064 2.2E-06 52.0 5.7 100 309-429 22-125 (288)
462 3oa2_A WBPB; oxidoreductase, s 93.9 0.028 9.6E-07 55.7 3.3 36 308-343 3-40 (318)
463 3e5r_O PP38, glyceraldehyde-3- 93.9 0.063 2.2E-06 53.4 5.8 38 309-346 4-45 (337)
464 3f1l_A Uncharacterized oxidore 93.9 0.11 3.7E-06 49.3 7.3 43 309-351 13-56 (252)
465 3ai3_A NADPH-sorbose reductase 93.9 0.079 2.7E-06 50.5 6.3 43 309-351 8-51 (263)
466 2jl1_A Triphenylmethane reduct 93.9 0.038 1.3E-06 53.3 4.0 37 309-345 1-40 (287)
467 1p9l_A Dihydrodipicolinate red 93.9 0.099 3.4E-06 49.5 6.8 31 310-340 2-35 (245)
468 3ioy_A Short-chain dehydrogena 93.8 0.082 2.8E-06 52.2 6.5 44 309-352 9-53 (319)
469 3asu_A Short-chain dehydrogena 93.8 0.088 3E-06 49.8 6.4 80 310-395 2-82 (248)
470 1c0p_A D-amino acid oxidase; a 93.8 0.043 1.5E-06 55.0 4.4 32 309-340 7-38 (363)
471 3o38_A Short chain dehydrogena 93.8 0.34 1.2E-05 46.0 10.6 42 309-350 23-66 (266)
472 4dgk_A Phytoene dehydrogenase; 93.7 0.027 9.1E-07 59.3 2.8 35 308-342 1-35 (501)
473 4dry_A 3-oxoacyl-[acyl-carrier 93.7 0.099 3.4E-06 50.6 6.6 42 310-351 35-77 (281)
474 3oz2_A Digeranylgeranylglycero 93.7 0.03 1E-06 56.3 3.1 32 311-342 7-38 (397)
475 1vl8_A Gluconate 5-dehydrogena 93.7 0.12 4.2E-06 49.4 7.2 43 309-351 22-65 (267)
476 3gpi_A NAD-dependent epimerase 93.7 0.035 1.2E-06 53.6 3.3 36 308-343 3-38 (286)
477 2nwq_A Probable short-chain de 93.7 0.082 2.8E-06 50.9 6.0 42 309-350 22-64 (272)
478 2ozp_A N-acetyl-gamma-glutamyl 93.6 0.073 2.5E-06 53.3 5.6 98 308-427 4-103 (345)
479 3sju_A Keto reductase; short-c 93.6 0.4 1.4E-05 46.1 10.8 42 309-350 25-67 (279)
480 2pnf_A 3-oxoacyl-[acyl-carrier 93.6 0.094 3.2E-06 49.2 6.2 43 309-351 8-51 (248)
481 3m2p_A UDP-N-acetylglucosamine 93.6 0.27 9.2E-06 47.9 9.7 35 309-343 3-38 (311)
482 1xg5_A ARPG836; short chain de 93.6 0.074 2.5E-06 51.2 5.5 42 309-350 33-75 (279)
483 1nff_A Putative oxidoreductase 93.5 0.058 2E-06 51.5 4.6 41 309-349 8-49 (260)
484 2wm3_A NMRA-like family domain 93.5 0.1 3.4E-06 50.7 6.4 36 309-344 6-43 (299)
485 1uls_A Putative 3-oxoacyl-acyl 93.5 0.072 2.5E-06 50.3 5.2 39 309-347 6-45 (245)
486 3awd_A GOX2181, putative polyo 93.4 0.081 2.8E-06 50.1 5.5 42 309-350 14-56 (260)
487 3gem_A Short chain dehydrogena 93.4 0.052 1.8E-06 51.9 4.1 37 309-345 28-65 (260)
488 3cps_A Glyceraldehyde 3-phosph 93.4 0.19 6.3E-06 50.3 8.1 32 307-338 16-48 (354)
489 1iy8_A Levodione reductase; ox 93.4 0.089 3.1E-06 50.3 5.7 43 309-351 14-57 (267)
490 3u9r_B MCC beta, methylcrotony 93.4 0.9 3.1E-05 47.9 13.7 159 26-204 366-544 (555)
491 4g81_D Putative hexonate dehyd 93.4 0.23 7.8E-06 47.3 8.4 42 310-351 10-53 (255)
492 4fgs_A Probable dehydrogenase 93.3 0.28 9.6E-06 47.2 9.1 40 310-349 30-71 (273)
493 3nyw_A Putative oxidoreductase 93.3 0.078 2.7E-06 50.3 5.2 43 309-351 8-51 (250)
494 1j5p_A Aspartate dehydrogenase 93.3 0.11 3.6E-06 49.4 5.9 77 309-423 13-91 (253)
495 3qj4_A Renalase; FAD/NAD(P)-bi 93.3 0.034 1.2E-06 55.3 2.6 33 308-340 1-36 (342)
496 3qiv_A Short-chain dehydrogena 93.3 0.44 1.5E-05 44.8 10.3 42 309-350 10-52 (253)
497 1u8f_O GAPDH, glyceraldehyde-3 93.2 0.14 4.9E-06 50.9 7.0 39 309-347 4-46 (335)
498 1xyg_A Putative N-acetyl-gamma 93.2 0.13 4.3E-06 51.8 6.7 98 309-427 17-116 (359)
499 2ywl_A Thioredoxin reductase r 93.2 0.052 1.8E-06 48.4 3.6 33 309-341 2-34 (180)
500 1ys4_A Aspartate-semialdehyde 93.2 0.11 3.7E-06 52.2 6.3 101 309-426 9-117 (354)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=2.1e-101 Score=849.65 Aligned_cols=518 Identities=34% Similarity=0.550 Sum_probs=465.3
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHH
Q 009256 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (539)
Q Consensus 8 ~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (539)
+++ +|+|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||+|+.||+|+||+++....... ...
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~-------~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGL-------ALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCS-------HHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhH-------HHH
Confidence 455 799999999999999999999999999999999999999999999999999999999986543221 234
Q ss_pred HHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCC
Q 009256 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167 (539)
Q Consensus 88 ~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~ 167 (539)
+++ ++|.++||||||+|||+|+|||++|+|+||+|||+++++|++||+++|++|++|++++|||++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 666 7799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchhHHHH
Q 009256 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247 (539)
Q Consensus 168 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 247 (539)
+++|+||+++||||+|+|++. .+++.++|+++++.++...+...+... ................+++..+++|+..+
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKPVP--SLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSCCC--CCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhccccc--ccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998875 578899999999998765544332221 11122233344455566788899999999
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCCCC---cCCCCCCCcceEEEEcCCCCcHHHH
Q 009256 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGLMGSGIA 324 (539)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~~~---~~~~~~~~~~kI~iIG~G~mG~~iA 324 (539)
+++++.+...+++++++.|.+.|.+++.|+|+++++++|+++|+++|.++.. ..+..+++|+||+|||+|.||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876432 2344567899999999999999999
Q ss_pred HHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCcCEEEEcccCChhHHHH
Q 009256 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404 (539)
Q Consensus 325 ~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~aDlVi~avpe~~~~~~~ 404 (539)
..++.+|++|+++|++++.++...+.+...+...+.++..+.. .....+++++++++++++||+|||+|+|++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999988888777766544322 12235678888888999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeE
Q 009256 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484 (539)
Q Consensus 405 ~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v 484 (539)
+|++|++++++++|++||||++++++++..+.+|+||+|+||||||+.+++|||++++.|++++++++..+.+.+||.||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcccchhhcchHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCcchhhccccCC
Q 009256 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 485 ~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~~~~~id~a~~~~g~~~Gpf~~~d~~~ 539 (539)
+++|.|||++||++.++++|+++++++|+++++||++++++|+|||||+++|.++
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vG 545 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAG 545 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHC
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhC
Confidence 9999999999999999999999999999999999999988999999999999764
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-95 Score=807.55 Aligned_cols=534 Identities=60% Similarity=0.955 Sum_probs=462.6
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCC-CcccCCCchhhhhhcCCC--
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (539)
|+++.+.++..+++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 55667889832789999999999889999999999999999999999999999999 76 999999999985422110
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
....+....++++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222334445 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc--Cch-hhhhhhcccccCChHHHHHHHHHHHHHH
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKP-WIRSLHRTDKLGSLSEAREVLKLARLQA 234 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (539)
+|++|++||++++|+||+++||||+|||++++.+++.+++++++.. |+. +.+. . ...+........+..++...
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK--T-DKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGC--C-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhh--c-cccCccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 322 2220 0 00112222333555666665
Q ss_pred HHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCCCCcCCCCCCCcceEEEE
Q 009256 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314 (539)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~~~~~~~~~~~~~kI~iI 314 (539)
++....||++..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++..+.+..++.|+||+||
T Consensus 239 ~~~~~g~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~VI 318 (725)
T 2wtb_A 239 LKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAII 318 (725)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEEE
T ss_pred HHhccCCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEEE
Confidence 54444599999999999999999999999999999999999999999999999999999988632113345678899999
Q ss_pred cCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCcCEEEEc
Q 009256 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394 (539)
Q Consensus 315 G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~aDlVi~a 394 (539)
|+|.||++||..|+++||+|++||++++.++.+.+.+++.+++++++|.++..+.....++++.+++++++++||+||+|
T Consensus 319 GaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIea 398 (725)
T 2wtb_A 319 GGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEA 398 (725)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEEC
T ss_pred cCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEEc
Confidence 99999999999999999999999999999999988888889999999988877777777889988888889999999999
Q ss_pred ccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHHHHHHHH
Q 009256 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474 (539)
Q Consensus 395 vpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~~~~~~~ 474 (539)
+|++.++|+.+++++.+++++++||+||||++++++++..+.+|++++|+|||+|++.++++|+++++.|++++++++.+
T Consensus 399 Vpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~ 478 (725)
T 2wtb_A 399 VIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLD 478 (725)
T ss_dssp CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCcchhhccccCC
Q 009256 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 475 l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~~~~~id~a~~~~g~~~Gpf~~~d~~~ 539 (539)
+++.+|+.|+++++.+||++||++.++++|++.++++|+++++||+++.++|+|||||+++|.++
T Consensus 479 l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vG 543 (725)
T 2wtb_A 479 VGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVG 543 (725)
T ss_dssp HHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHC
T ss_pred HHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999754
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=1e-94 Score=801.68 Aligned_cols=532 Identities=30% Similarity=0.498 Sum_probs=469.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCC-CcccCCCchhhhhhcCCC--
Q 009256 3 APRVTMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (539)
.+.+.++..+++|++||||||+ .|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 5 ~~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 83 (715)
T 1wdk_A 5 GKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDA 83 (715)
T ss_dssp CSSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHH
T ss_pred CCeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHH
Confidence 3568888327899999999994 69999999999999999999999999999999 76 999999999986532111
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
....+....++++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~ 162 (715)
T 1wdk_A 84 ELIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVD 162 (715)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHH
Confidence 1111223345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc--CchhhhhhhcccccCChHHHHH-HHHHHHH-H
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKLGSLSEARE-VLKLARL-Q 233 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~ 233 (539)
+|++|++||++++|+||+++||||+|||++++.+++.+++++++.. |....+.. ...+...-..+.. .+..+++ .
T Consensus 163 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~k~~~ 241 (715)
T 1wdk_A 163 NAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQP-KLEKLKLNAIEQMMAFETAKGFV 241 (715)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHHGG-GGSCCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhccc-ccCccccCchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 41111100 0000000001111 1333333 3
Q ss_pred HHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCCCCcCCCCCCCcceEEE
Q 009256 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313 (539)
Q Consensus 234 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~~~~~~~~~~~~~kI~i 313 (539)
.+++..+|||+..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++++. + .+++++||+|
T Consensus 242 ~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~V 319 (715)
T 1wdk_A 242 AGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAAV 319 (715)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEEE
T ss_pred HHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEEE
Confidence 5688899999999999999999999999999999999999999999999999999999998775322 2 4567889999
Q ss_pred EcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCcCEEEE
Q 009256 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 393 (539)
Q Consensus 314 IG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~aDlVi~ 393 (539)
||+|+||++||..|+++||+|++||++++.++.+.+.++..+++++++|.++..+.....++++.+++++++++||+||+
T Consensus 320 IGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIe 399 (715)
T 1wdk_A 320 LGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVE 399 (715)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEEE
T ss_pred ECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEEE
Confidence 99999999999999999999999999999999988889889999999999998888878888998888888999999999
Q ss_pred cccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHHHHHHH
Q 009256 394 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473 (539)
Q Consensus 394 avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~~~~~~ 473 (539)
|+|++.++|+.+++++.+++++++||+||||++++++++..+.+|++++|+|||+|++.++++|+++++.|++++++.+.
T Consensus 400 aV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~ 479 (715)
T 1wdk_A 400 AVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTV 479 (715)
T ss_dssp CCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCcchhhccccCC
Q 009256 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 474 ~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~~~~~id~a~~~~g~~~Gpf~~~d~~~ 539 (539)
++++.+|+.++++++.+||++||++.++++|++.++++|+++++||+++.++|+|||||+++|.++
T Consensus 480 ~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vG 545 (715)
T 1wdk_A 480 AYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVG 545 (715)
T ss_dssp HHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHC
T ss_pred HHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999988999999999999754
No 4
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=6.3e-59 Score=455.11 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=229.9
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccch
Q 009256 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (539)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (539)
|.+|+ +|+|++||||||+ +|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... ...+..
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPD--YEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCC--HHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchh--hHHHHH
Confidence 67888 7999999999994 7999999999999999999999999999999999999999999998653322 223334
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHH
Q 009256 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (539)
Q Consensus 85 ~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 164 (539)
..+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.++|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 455666 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchhH
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (539)
||++|+|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999975443
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++||++||+|||+|++.
T Consensus 203 -~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 45788889999999999999999999999999999999999999999864
No 5
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.1e-58 Score=456.86 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=225.2
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc---c
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---V 79 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---~ 79 (539)
++|.+++ +|+|++||||||+ +|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........ .
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 5788999 7999999999996 699999999999999999999999999999999999999999998764332211 1
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
..+....+.++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 12233344566 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
++|++||++++|+||+++||||+|||++++.+++.++|++++..||.+++
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 222 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLG------------------------------ 222 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999875443
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.....+++++++.|...+..++.|+|++|+++||+|||+|++.
T Consensus 223 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 223 ------LIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp ------HHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred ------HHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 45788888889999999999999999999999999999999999999864
No 6
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.3e-58 Score=452.84 Aligned_cols=252 Identities=30% Similarity=0.450 Sum_probs=230.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.+++ +|+|++||||||+ +|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++...... ..
T Consensus 4 ms~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~---~~ 79 (258)
T 4fzw_A 4 MSELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLA---AT 79 (258)
T ss_dssp -CEEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHH---HH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhh---hH
Confidence 34688999 7999999999996 6999999999999999999999999999999999999999999998653211 11
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 80 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 158 (258)
T 4fzw_A 80 LNDTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASK 158 (258)
T ss_dssp HTCSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred HHhHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHH
Confidence 222334566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
|++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 159 llltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------------- 206 (258)
T 4fzw_A 159 MVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQ-------------------------------- 206 (258)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH--------------------------------
T ss_pred HHHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+++++....+++++++.|.+.+..++.|+|++|++++|+|||+|++.
T Consensus 207 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 207 ----AAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp ----HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 45788888889999999999999999999999999999999999999864
No 7
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=6e-57 Score=443.08 Aligned_cols=256 Identities=27% Similarity=0.465 Sum_probs=232.3
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCCC
Q 009256 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (539)
Q Consensus 1 M~~~~v~~~-~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (539)
|+|++|.++ . +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++..... .
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNE-E 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCH-H
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCH-H
Confidence 678899999 7 8999999999996 6999999999999999999999999999999999 99999999999865321 1
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
....+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222333455666 779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVR---------------------------- 213 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875443
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.+...+++++++.|...+..++.|+|++|++++|+|||+|++.
T Consensus 214 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 214 --------LAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45788888888999999999999999999999999999999999998864
No 8
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=4.9e-57 Score=442.71 Aligned_cols=255 Identities=38% Similarity=0.620 Sum_probs=230.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccccc
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (539)
++++.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 46799999 79999999999966999999999999999999999999999999999999999999998654321111223
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHH
Q 009256 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (539)
Q Consensus 83 ~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (539)
....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+++
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 33344556 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCch
Q 009256 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (539)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (539)
++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 209 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATAR--------------------------------- 209 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999875443
Q ss_pred hHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 210 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f~ 259 (261)
T 3pea_A 210 ---AVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSFS 259 (261)
T ss_dssp ---HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888889999999999999999999999999999999999863
No 9
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=9.1e-57 Score=441.89 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=230.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|++++|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 8999999999996 5999999999999999999999999999999999999999999998764322111
Q ss_pred --cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 80 --SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 80 --~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
........+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~ 157 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGER 157 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHH
Confidence 11122344566 67999999999999999999999999999999999999999999999999999987 799999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 ~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 209 (268)
T 3i47_A 158 AAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVK---------------------------- 209 (268)
T ss_dssp HHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986543
Q ss_pred CCCchhHHHHHHHHHHhhcCCchh-HHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~-~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|++++.....++++ .++.|...+..++.|+|++|++++|+|||+|++.+
T Consensus 210 --------~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 261 (268)
T 3i47_A 210 --------NSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNE 261 (268)
T ss_dssp --------HHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC-
T ss_pred --------HHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 4577888888888888 78999999999999999999999999999999754
No 10
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.4e-57 Score=444.44 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=229.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++++ |+++|+|||||.|++||+|+|++++...... ..
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDAT-EG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHH-HH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChh-hH
Confidence 5677899999 7999999999996 7999999999999999998 5799999999999999999999988652211 11
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
..+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 12223445666 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~------------------------------ 217 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNF------------------------------ 217 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999875443
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+++++....+++++++.|...+..++.|+|++|++++|+|||+|++..
T Consensus 218 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 268 (275)
T 3hin_A 218 ------AVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRE 268 (275)
T ss_dssp ------HHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC--
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 457788888888999999999999999999999999999999999998754
No 11
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.3e-56 Score=439.96 Aligned_cols=254 Identities=32% Similarity=0.450 Sum_probs=231.4
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc
Q 009256 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 1 M~~~~v~~~~~~~~-v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (539)
|+++.+.++. +++ |++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 6788899999 666 9999999996 59999999999999999999999999999999999999999999986532111
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
.+......++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1122233556 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhC
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (539)
|+++++||++++|+||+++||||+|+|++++.+++.++|++|+..||.+++
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 211 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGR----------------------------- 211 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999976543
Q ss_pred CCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.....+++++++.|...+..++.|+|++|++++|+|||+|++.
T Consensus 212 -------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 212 -------AVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp -------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 45788888888899999999999999999999999999999999999864
No 12
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=1.7e-56 Score=441.52 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=229.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 6788899999 7999999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
......... + .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 99 ~~~~~~~~~-~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFFAT-W-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTTGG-G-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHH-H-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 001111112 4 56899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------ 226 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAAR------------------------------ 226 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986543
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 227 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 227 ------MAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp ------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45788888888899999999999999999999999999999999999864
No 13
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=1.2e-55 Score=431.34 Aligned_cols=250 Identities=29% Similarity=0.380 Sum_probs=228.7
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccch
Q 009256 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (539)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (539)
|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... .....+..
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRK--PDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSC--CCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcc--hhHHHHHH
Confidence 67888 7999999999996 69999999999999999999999999999999999999999999986531 11222223
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHH
Q 009256 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (539)
Q Consensus 85 ~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 164 (539)
..++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+++++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 355666 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchhH
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (539)
||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999886543
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 203 -~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45788888888899999999999999999999999999999999998864
No 14
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=8.5e-56 Score=434.82 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=218.8
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhh---hhcC
Q 009256 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (539)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~---~~~~ 75 (539)
|| ++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 57899999 8999999999996 79999999999999999999999999999999999999999999987 3322
Q ss_pred CCcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
.. ........+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233455666 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (539)
..+|+++++||++++|+||+++||||+||| ++.+++.++|++|++.||.+++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~-------------------------- 208 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLK-------------------------- 208 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999 8999999999999999986543
Q ss_pred HhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCC
Q 009256 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (539)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~ 297 (539)
.+|+.++... .+++++++.|...+..++.|+|++|++++|+|||+|++.+.
T Consensus 209 ----------~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~~ 259 (266)
T 3fdu_A 209 ----------QTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQE 259 (266)
T ss_dssp ----------HHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC----------
T ss_pred ----------HHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 3455666554 45788999999999999999999999999999999998653
No 15
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.4e-55 Score=437.28 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=229.9
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC
Q 009256 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (539)
Q Consensus 1 M~~~~v~~~~~~--~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~ 77 (539)
|+++ |.++. + ++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 5555 88888 7 999999999996 59999999999999999999999999999999999999999999987622111
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
....+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|..
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~ 177 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRK 177 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHH
Confidence 1122333445666 67999999999999999999999999999999999999999999999999 788899999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 229 (286)
T 3myb_A 178 AAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVA---------------------------- 229 (286)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875443
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~ 297 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.+.
T Consensus 230 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g~ 281 (286)
T 3myb_A 230 --------MGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHTP 281 (286)
T ss_dssp --------HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCCC
Confidence 4577888888889999999999999999999999999999999999987653
No 16
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=5.2e-56 Score=435.89 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=224.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCc-ccCCCchhhhh--h-cC
Q 009256 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F-~aG~Dl~~~~~--~-~~ 75 (539)
||+++|.++. +++|++|||||| +.|+||.+|+.+|.++++.++.|+++|+|||||.|+.| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 8999999999 899999999999 57999999999999999999999999999999999999 99999999876 2 11
Q ss_pred CCcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
......+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111222333445666 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecC-cchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~-~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (539)
..+|+++++||++++|+||+++||||+||| ++++.+++.++|++|++.||.+++
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIA------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 999999999999999999999999999999 999999999999999999986543
Q ss_pred HHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++.+|+||+++.|
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 214 -----------ATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp -----------HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred -----------HHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 4567788777778899999999999999999999999999999998764
No 17
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=1.7e-55 Score=437.76 Aligned_cols=255 Identities=24% Similarity=0.347 Sum_probs=224.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc----
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---- 78 (539)
..+.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4577888 7999999999996 799999999999999999999999999999999999999999999865432211
Q ss_pred --ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCC-cchhhccccccC
Q 009256 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-FGGTQRLPRLVG 155 (539)
Q Consensus 79 --~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~-~g~~~~l~r~vG 155 (539)
...+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|+|++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 112233445666 6799999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (539)
..+|+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 235 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIE-------------------------- 235 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999986543
Q ss_pred HhCCCchhHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHh-CCHHHHhHHHHHHhhhhccCCC
Q 009256 236 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~e~~~~~~~~-~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++.... .+++++++.|...+..++ .|+|++|++.+|+|||+|++.+
T Consensus 236 ----------~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~g 288 (290)
T 3sll_A 236 ----------LTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFRD 288 (290)
T ss_dssp ----------HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCCS
T ss_pred ----------HHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 45778888888 899999999999999999 9999999999999999998754
No 18
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=1.7e-55 Score=430.24 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=226.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.+. .
T Consensus 5 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~ 76 (255)
T 3p5m_A 5 MNGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------G 76 (255)
T ss_dssp BTTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------H
T ss_pred CceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------H
Confidence 34689999 7999999999996 6999999999999999999999999999999999999999999987631 2
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+....++++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 77 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 155 (255)
T 3p5m_A 77 AADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSR 155 (255)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 334455666 7799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (255)
T 3p5m_A 156 MAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFG-------------------------------- 203 (255)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999886543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 204 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 253 (255)
T 3p5m_A 204 ----WTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNFR 253 (255)
T ss_dssp ----HHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999998863
No 19
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=4e-56 Score=437.49 Aligned_cols=256 Identities=24% Similarity=0.333 Sum_probs=228.5
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc
Q 009256 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (539)
|+ ++.|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|+.||+|+|++++........
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence 54 67899999 7999999999996 699999999999999999999999999999999999999999999876432211
Q ss_pred ccccchHHHHHHHHHH-HhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i-~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
..+.....+.+ +++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 -~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 84 -SLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp -CCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred -HHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 11222222334 557 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQ---------------------------- 213 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999876543
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 214 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 214 --------ATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp --------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 45677888888889999999999999999999999999999999998864
No 20
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=2.6e-55 Score=434.98 Aligned_cols=256 Identities=25% Similarity=0.358 Sum_probs=231.9
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc--
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (539)
++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 46799999 7999999999996 6999999999999999999999999999999999999999999998764432211
Q ss_pred -cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCC-CCcchhhccccccCHH
Q 009256 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PGFGGTQRLPRLVGLS 157 (539)
Q Consensus 80 -~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~-p~~g~~~~l~r~vG~~ 157 (539)
..+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|+|++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 12223345566 67999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 225 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHA---------------------------- 225 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999976543
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++..
T Consensus 226 --------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 276 (279)
T 3g64_A 226 --------QTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQG 276 (279)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCCC
T ss_pred --------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 457788888888999999999999999999999999999999999988643
No 21
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=5.6e-56 Score=436.14 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=229.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 84 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPD 84 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSC
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHH
Confidence 46788999 7999999999996 699999999999999999999999999999999999999999999876432221111
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+.. ++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 85 ~~~--~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 85 FSA--SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp CCS--CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred HHH--HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 211 3455 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc-CchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCC
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (539)
+++||++++|+||+++||||+|||++++.+++.++|++|+.. ||.+++
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~------------------------------- 210 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAA------------------------------- 210 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHH-------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHH-------------------------------
Confidence 999999999999999999999999999999999999999999 875443
Q ss_pred chhHHHHHHHHHHhhcCCchhH--HHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 241 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~--l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++.....+++++ ++.|...+..++.|+|++|++++|++||+|++..
T Consensus 211 -----~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~g 263 (265)
T 3qxz_A 211 -----LTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWAG 263 (265)
T ss_dssp -----HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCCC
T ss_pred -----HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCCC
Confidence 45778888888889999 9999999999999999999999999999998653
No 22
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=1.8e-55 Score=434.06 Aligned_cols=258 Identities=24% Similarity=0.317 Sum_probs=230.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC---C
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~---~ 76 (539)
|+ +.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 65 5688998 7999999999996 799999999999999999999999999999999999999999998754210 0
Q ss_pred Ccc-cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
... ..+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 000 11222345566 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (539)
..+|+++++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------- 211 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQV-------------------------- 211 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999875433
Q ss_pred HhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCC
Q 009256 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (539)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~ 297 (539)
.+|+.++.+...+++++++.|...+..++.|+|++|++++|++||+|++.+.
T Consensus 212 ----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~~ 263 (269)
T 1nzy_A 212 ----------MAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQV 263 (269)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCSS
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 4567788888888999999999999999999999999999999999987543
No 23
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=9.4e-56 Score=432.88 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=190.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
+..|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 45688999 7999999999996 699999999999999999999999999999999999999999999876432222223
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 344456677 7799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLM-------------------------------- 210 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999875543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhh
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~ 291 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|+|||+
T Consensus 211 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 211 ----AVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ----HHHHHHHCC-------------------------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 4577888888888999999999999999999999999999999985
No 24
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=5.1e-55 Score=429.60 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=221.3
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc
Q 009256 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (539)
|+ +++|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++ ... ...
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~~~- 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--MVR- 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--ccc-
Confidence 54 57899999 7999999999996 69999999999999999999999999999999999999999998 321 111
Q ss_pred ccccchHHHH-HHHHHH-H--hCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhcccccc
Q 009256 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (539)
Q Consensus 79 ~~~~~~~~~~-~~~~~i-~--~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v 154 (539)
...+.....+ ++ .++ . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122222334 56 668 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHH
Q 009256 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (539)
Q Consensus 155 G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (539)
|..+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVR------------------------- 213 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999999876543
Q ss_pred HHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|+|||+|++.
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 214 -----------NAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp -----------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred -----------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999998864
No 25
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=9.8e-55 Score=427.84 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=228.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEec-CCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++.. .. .....
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~~-~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-AD-PRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-SC-HHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-cc-hhHHH
Confidence 45788998 799999999999669999999999999999999999999999999 8999999999998864 11 11112
Q ss_pred cchHH-HHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCc-eEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 82 ~~~~~-~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
+.... ++++ .+|.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|+|++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22334 5666 67999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|+|++++.+++.+++++|+..||.+++
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 213 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVS------------------------------ 213 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999875433
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.+...+++++++.|...+..++.|+|++|++++|++||+|++
T Consensus 214 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 262 (265)
T 2ppy_A 214 ------NIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNW 262 (265)
T ss_dssp ------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4577888888888999999999999999999999999999999999886
No 26
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=9.8e-55 Score=426.87 Aligned_cols=254 Identities=22% Similarity=0.279 Sum_probs=228.6
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEec-CC-CCcccCCCchhhhhhcCCC
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g-~g-~~F~aG~Dl~~~~~~~~~~ 77 (539)
|+|+.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+ +|+||||| .| ++||+|+|++++.......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~ 78 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP 78 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence 8899999999 7999999999996 79999999999999999999999 99999999 88 9999999999876532211
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
. .+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 79 -~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 79 -L-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp -T-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred -H-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 1 1222345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|+|++++.+++.+++++|+..||.+++
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 207 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIA---------------------------- 207 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875432
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHH--HHhCCHHHHhHHHHHHhhhhccCC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~--~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|.+.+. .++.|+|++|++++|++||+|++.
T Consensus 208 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~~ 259 (261)
T 1ef8_A 208 --------VIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFV 259 (261)
T ss_dssp --------HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCCC
Confidence 45677888878889999999999999 999999999999999999998863
No 27
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=2.6e-55 Score=435.16 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=223.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcC----CC
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~----~~ 77 (539)
++.|.++. +++|++||||||+.|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 67899999 79999999999999999999999999999999999999999999998 79999999998864220 00
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeC-CceEeCCcccCCCCCCcchhhccccccCH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (539)
....+....++++ .+|.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112223345666 779999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 009256 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (539)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (539)
.+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~--------------------------- 218 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIE--------------------------- 218 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999986543
Q ss_pred hCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhh--ccC
Q 009256 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA--TSK 294 (539)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~--~~~ 294 (539)
.+|+.++.. .+.++++.|...+..++.|+|++|++++|+|||+ |++
T Consensus 219 ---------~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~~~P~f 266 (287)
T 3gkb_A 219 ---------AAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGAQTPAG 266 (287)
T ss_dssp ---------HHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTTTSHHH
T ss_pred ---------HHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCch
Confidence 335566542 3568899999999999999999999999999987 554
No 28
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=8.3e-55 Score=443.13 Aligned_cols=289 Identities=20% Similarity=0.295 Sum_probs=233.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCCC--c
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (539)
++.|.+++ +|+|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++......+ .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 56799999 8999999999996 6999999999999999999999999999999998 6999999999986543221 1
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
...+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 222333344566 6799999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCch----------------hhhhhhcccccCChHH
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP----------------WIRSLHRTDKLGSLSE 222 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~----------------~~~~~~~~~~~~~~~~ 222 (539)
|++|++||++++|+||+++||||+|||+++|.+.+.+++.+....... .+..++.. ..+..
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~---~~~~~ 241 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTG---DTVAD 241 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTC---SSHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCC---CCHHH
Confidence 999999999999999999999999999999999999988764332110 01111111 11111
Q ss_pred HHHHHH-----HHHHHH-HHhCCCchhHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhCCHHHHhHHHHHH--hhhhcc
Q 009256 223 AREVLK-----LARLQA-KKTAPNMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATS 293 (539)
Q Consensus 223 ~~~~~~-----~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~-~~~~~l~~e~~~~~~~~~s~~~~~~~~af~--~kr~~~ 293 (539)
..+.++ ++.+.. +-......+...+|+.++++... +++++++.|...+..++.|+|++||++||+ |||+|+
T Consensus 242 i~~~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~ 321 (353)
T 4hdt_A 242 IIAALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPK 321 (353)
T ss_dssp HHHHHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCC
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCC
Confidence 111111 111222 23445666888999999998875 799999999999999999999999999999 999999
Q ss_pred CCCC
Q 009256 294 KVPN 297 (539)
Q Consensus 294 ~~~~ 297 (539)
|.|.
T Consensus 322 w~p~ 325 (353)
T 4hdt_A 322 WRPA 325 (353)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 9864
No 29
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.2e-55 Score=427.33 Aligned_cols=251 Identities=26% Similarity=0.367 Sum_probs=223.0
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccccc
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (539)
+.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... ..+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDH---GDV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CH---HHH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccch---hHH
Confidence 6788998 7999999999995 7999999999999999999999999999999999999999999988643211 111
Q ss_pred ch-HHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 83 ~~-~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
.. ..++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 244566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 205 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIG-------------------------------- 205 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999875432
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.+...+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 206 ----~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~~ 255 (257)
T 2ej5_A 206 ----LIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLFQ 255 (257)
T ss_dssp ----HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCCC
Confidence 45677888888889999999999999999999999999999999998763
No 30
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=6.7e-55 Score=427.34 Aligned_cols=253 Identities=30% Similarity=0.466 Sum_probs=226.5
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc
Q 009256 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (539)
|+ +..+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 65 56788898 7899999999996 6999999999999999999999999999999999999999999988642210
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
...+...+ +++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 01111112 455 6699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhC
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (539)
|+++++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 206 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALR----------------------------- 206 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999875443
Q ss_pred CCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 207 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 255 (258)
T 2pbp_A 207 -------LIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRF 255 (258)
T ss_dssp -------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4567888888889999999999999999999999999999999998875
No 31
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=3e-55 Score=433.64 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=221.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC-------
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG------- 75 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~------- 75 (539)
++|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 5789999 7999999999996 799999999999999999999999999999999999999999999865432
Q ss_pred CCcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
......+. ..++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|
T Consensus 90 ~~~~~~~~-~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG 166 (274)
T 3tlf_A 90 LSTYDQWE-APQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLP 166 (274)
T ss_dssp TCSGGGGS-CCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSC
T ss_pred hhHHHHHH-HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhC
Confidence 11111111 223445 568999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCC--CCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ 233 (539)
Q Consensus 156 ~~~a~~l~l~g~--~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (539)
..+|+++++||+ +++|+||+++||||+|+|++++.+++.++|++|++.||.+++
T Consensus 167 ~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------ 222 (274)
T 3tlf_A 167 RSIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVR------------------------ 222 (274)
T ss_dssp HHHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------
T ss_pred HHHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHH------------------------
Confidence 999999999999 999999999999999999999999999999999999875443
Q ss_pred HHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 234 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 223 ------------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 223 ------------GTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp ------------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 45788888888899999999999999999999999999999999998863
No 32
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=6e-55 Score=426.38 Aligned_cols=249 Identities=28% Similarity=0.433 Sum_probs=225.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|+ +.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 44 5689999 7999999999996 6999999999999999999999999999999999999999999998763321111
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
.. + . + ..+ ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 83 ~~----~-~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 RG----L-G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp TE----E-T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred hh----h-h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 11 1 1 2 235 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 204 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVA------------------------------ 204 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999876543
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 205 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 254 (256)
T 3trr_A 205 ------ATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQ 254 (256)
T ss_dssp ------HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 45788888888999999999999999999999999999999999999864
No 33
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=6.6e-56 Score=441.71 Aligned_cols=256 Identities=25% Similarity=0.333 Sum_probs=183.6
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhh---hcCCC
Q 009256 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (539)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~---~~~~~ 77 (539)
++.|.++. ++ +|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 46799999 77 99999999996 699999999999999999999999999999999999999999999865 11110
Q ss_pred ----cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccc
Q 009256 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL 153 (539)
Q Consensus 78 ----~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ 153 (539)
....+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111122223344 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc-CchhhhhhhcccccCChHHHHHHHHHHHH
Q 009256 154 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 232 (539)
Q Consensus 154 vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (539)
+|..+|+++++||++++|+||+++||||+|||++++.+++.++|++|+.. ||.+++
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~----------------------- 242 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMA----------------------- 242 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHH-----------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHHH-----------------------
Confidence 99999999999999999999999999999999999999999999999998 875443
Q ss_pred HHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|+|||+|++.+
T Consensus 243 -------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~ 293 (298)
T 3qre_A 243 -------------VIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPS 293 (298)
T ss_dssp -------------HHHHHHHGGGGC---------------------------------------
T ss_pred -------------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 457888888888999999999999999999999999999999999998755
No 34
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=3.7e-55 Score=430.49 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=224.4
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCCC
Q 009256 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (539)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (539)
|+ ++.|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~ 83 (267)
T 3r9t_A 5 MTDAPGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY 83 (267)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCS
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchh
Confidence 44 56799999 7999999999995 7999999999999999999999999999999999 5999999999987643222
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
.. .........+ . +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 ~~-~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 160 (267)
T 3r9t_A 84 HP-DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRK 160 (267)
T ss_dssp CT-TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHH
T ss_pred hH-HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHH
Confidence 11 1111100112 1 3489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 161 ~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 212 (267)
T 3r9t_A 161 VAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQ---------------------------- 212 (267)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999886543
Q ss_pred CCCchhHHHHHHH---HHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 238 APNMPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 238 ~~~~~a~~~~~~~---~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+. ++.....+++++++.|...+..++.|+|++|++++|+|||+|++.
T Consensus 213 --------~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 213 --------ASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp --------HHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 44667 777777889999999999999999999999999999999998864
No 35
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-54 Score=429.94 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=226.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........
T Consensus 32 ~~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 110 (287)
T 2vx2_A 32 PRPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAE 110 (287)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHH
T ss_pred CcceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHH
Confidence 35788999 7899999999996 699999999999999999999999999999999999999999998754321111112
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |+|++|..+|++
T Consensus 111 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~ 188 (287)
T 2vx2_A 111 VFQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALE 188 (287)
T ss_dssp HHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHH
Confidence 223344566 679999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 189 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------------- 236 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVS-------------------------------- 236 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999875433
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++
T Consensus 237 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 237 ----LGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp ----HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 3467788877888999999999999999999999999999999999875
No 36
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=3.5e-55 Score=429.20 Aligned_cols=249 Identities=27% Similarity=0.338 Sum_probs=207.2
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccccc
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (539)
+.|.++. +++|++||||||+ +|+||.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++....... ...
T Consensus 11 ~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~- 87 (262)
T 3r9q_A 11 PAVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNE-LHP- 87 (262)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCC-CCT-
T ss_pred CEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhh-HHH-
Confidence 3588999 7999999999996 69999999999999999999999999999999999999999999986543221 110
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHH
Q 009256 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (539)
Q Consensus 83 ~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (539)
.....++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+++
T Consensus 88 -~~~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 165 (262)
T 3r9q_A 88 -HGPGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDL 165 (262)
T ss_dssp -TSSCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred -hhhhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 0011222 34679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCch
Q 009256 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (539)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (539)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 166 ~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 212 (262)
T 3r9q_A 166 ILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVR--------------------------------- 212 (262)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986543
Q ss_pred hHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.....+++++++.|.. +..++.| |++|++++|+|||+|.+.
T Consensus 213 ---~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~~ 260 (262)
T 3r9q_A 213 ---ADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHGA 260 (262)
T ss_dssp ---HHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC-------------------
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCCC
Confidence 45788888888999999999999 9999999 999999999999998863
No 37
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-54 Score=424.43 Aligned_cols=253 Identities=18% Similarity=0.179 Sum_probs=217.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC-CCc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~ 78 (539)
|+++.|.++. +++|++||||||+ +|+||.+|+.+|.+++++++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 6788899999 7999999999996 6999999999999999999986 6999999999999999999999876421 112
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|..+
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~ 159 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQK 159 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHH
Confidence 233445556677 779999999999999999999999999999999999999999999999999875 778999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhC
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (539)
|++|++||++++|+||+++||||+|||+.+ +.+.+++++|++.||.+++
T Consensus 160 A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~----------------------------- 208 (267)
T 3hp0_A 160 AHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIA----------------------------- 208 (267)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999998654 3478999999999886543
Q ss_pred CCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++... ..++++++.|.+.+..++.|+|++|++++|+|||+|++.+
T Consensus 209 -------~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~ 258 (267)
T 3hp0_A 209 -------HYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWED 258 (267)
T ss_dssp -------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC----
T ss_pred -------HHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 3456666543 3457778889999999999999999999999999999754
No 38
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=5.6e-54 Score=424.98 Aligned_cols=256 Identities=20% Similarity=0.309 Sum_probs=227.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC---c
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG---D 78 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~ 78 (539)
|+++.++.++++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... .
T Consensus 2 ~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 81 (275)
T 1dci_A 2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD 81 (275)
T ss_dssp CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred CceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccch
Confidence 6778888745789999999996 79999999999999999999999999999999999999999999986531110 0
Q ss_pred -------ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccc
Q 009256 79 -------VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (539)
Q Consensus 79 -------~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 151 (539)
...+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~ 160 (275)
T 1dci_A 82 VARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLP 160 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGG
T ss_pred hhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHH
Confidence 001112234555 678999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCH-HHHHHHHHcCCCCCHHHHHHcCCcceecCc-chHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHH
Q 009256 152 RLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKL 229 (539)
Q Consensus 152 r~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (539)
|++|. .+|++|++||++++|+||+++||||+|||+ +++.+++.+++++|++.||.+++
T Consensus 161 r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~-------------------- 220 (275)
T 1dci_A 161 KVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ-------------------- 220 (275)
T ss_dssp GTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHH--------------------
T ss_pred HHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHH--------------------
Confidence 99999 999999999999999999999999999999 99999999999999999976543
Q ss_pred HHHHHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhh---hhccCC
Q 009256 230 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSKV 295 (539)
Q Consensus 230 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~k---r~~~~~ 295 (539)
.+|+.++.+...+++++++.|...+..++.|+|++|++++|++| |+|++.
T Consensus 221 ----------------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f~ 273 (275)
T 1dci_A 221 ----------------GSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITFS 273 (275)
T ss_dssp ----------------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCCC
T ss_pred ----------------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCCC
Confidence 45677888888889999999999999999999999999999999 888753
No 39
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.5e-54 Score=426.05 Aligned_cols=253 Identities=23% Similarity=0.241 Sum_probs=225.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhh-c-CCCccc
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (539)
++.+.++.++++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 456888873478999999999999999999999999999999999999999999999999999999 7542 1 101011
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHH
Q 009256 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (539)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (539)
.+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1223345666 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCC
Q 009256 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (539)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (539)
++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 215 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALH------------------------------- 215 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999875432
Q ss_pred chhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.+... ++++++.|...+..++.|+|++|++++|++||+|++
T Consensus 216 -----~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 216 -----HTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp -----HHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 346777777777 899999999999999999999999999999998874
No 40
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=1.6e-54 Score=427.45 Aligned_cols=255 Identities=24% Similarity=0.287 Sum_probs=215.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEec-----CC-CCcccCCCchhhhhhcC
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVHG 75 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g-----~g-~~F~aG~Dl~~~~~~~~ 75 (539)
++.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+||||| .| ++||+|+|++++.....
T Consensus 9 ~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~ 87 (275)
T 4eml_A 9 YDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY 87 (275)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------
T ss_pred CceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc
Confidence 67799999 7999999999996 69999999999999999999999999999999 88 59999999999865221
Q ss_pred CCcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
............+++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 88 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG 166 (275)
T 4eml_A 88 IDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVG 166 (275)
T ss_dssp -------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHC
T ss_pred cchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhH
Confidence 111111111234566 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (539)
..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 167 ~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 220 (275)
T 4eml_A 167 QKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIR-------------------------- 220 (275)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999986543
Q ss_pred HhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|++++..... .....+.|.+.+..++.|+|++|++.+|+|||+|++..
T Consensus 221 ----------~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 270 (275)
T 4eml_A 221 ----------CLKAAFNADCDG-QAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQ 270 (275)
T ss_dssp ----------HHHHHHHHTTSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCTT
T ss_pred ----------HHHHHHHhhhcc-chhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 345566654332 23344567788889999999999999999999998643
No 41
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=8.9e-55 Score=430.88 Aligned_cols=253 Identities=25% Similarity=0.346 Sum_probs=215.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccccc
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (539)
++|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...........
T Consensus 20 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~- 97 (278)
T 4f47_A 20 PDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD- 97 (278)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC--------------------
T ss_pred CceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH-
Confidence 5688999 7999999999996 699999999999999999999999999999999999999999999865432211110
Q ss_pred chHHHHHHHHHHH---hCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 83 PDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 83 ~~~~~~~~~~~i~---~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
......++ +.+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 98 ~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a 176 (278)
T 4f47_A 98 GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVA 176 (278)
T ss_dssp ---CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHH
T ss_pred HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHH
Confidence 00112233 3455 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|+|++++.+++.++|++|++.||.+++
T Consensus 177 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 226 (278)
T 4f47_A 177 CDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQ------------------------------ 226 (278)
T ss_dssp HHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999875443
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 227 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 227 ------AILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp ------HHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 45788888888899999999999999999999999999999999998864
No 42
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=6.6e-55 Score=429.86 Aligned_cols=253 Identities=22% Similarity=0.264 Sum_probs=216.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC-cccc
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (539)
+++|.++.++++|++||||||+.|+||.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 578999993348999999999999999999999999999999999999999999999999999999986542211 1112
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986554
Q ss_pred hhHHHHHHHHHHhhc---CCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 242 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~---~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++.... .+++..++.| ..++.|+|++|++++|+|||+|++..
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~g 268 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFTD 268 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC--
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 23444443332 2334444444 57899999999999999999998643
No 43
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=3.1e-54 Score=423.49 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=218.4
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccc
Q 009256 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 91 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEG 91 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhh
Confidence 357799999 7999999999996 69999999999999999999999999999999999999999999986543221111
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHH
Q 009256 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (539)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (539)
.. . . + ..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 92 --~~-~-~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 92 --RG-L-G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp --TE-E-T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred --hh-h-h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 11 1 1 2 22344 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCC
Q 009256 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (539)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (539)
++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 213 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVA------------------------------- 213 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999875443
Q ss_pred chhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 214 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3qxi_A 214 -----ATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWT 263 (265)
T ss_dssp -----HHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999999864
No 44
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-53 Score=421.80 Aligned_cols=253 Identities=26% Similarity=0.349 Sum_probs=219.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCC-CcccCCCchhhhhhcCCCccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
|+.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|+ +||+|+|++++....... ..
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~-~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG-ED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------C-CS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccch-hh
Confidence 45688998 7899999999994 79999999999999999999999999999999998 999999999885421111 11
Q ss_pred cc-chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 81 ~~-~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
.+ .....+++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11134566 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 218 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR------------------------------ 218 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999875443
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHH-HHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~-~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|+.++ ...+++++++.|. ..+..++.|+|++|++++|++||+|++.+
T Consensus 219 ------~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 268 (273)
T 2uzf_A 219 ------FLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQ 268 (273)
T ss_dssp ------HHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCSS
T ss_pred ------HHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCCC
Confidence 3355565 2346788899999 99999999999999999999999988643
No 45
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=4.3e-54 Score=425.82 Aligned_cols=252 Identities=23% Similarity=0.290 Sum_probs=210.4
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc--
Q 009256 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD-- 78 (539)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~-- 78 (539)
+++.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++ +|||||.|++||+|+|++++........
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 101 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEE 101 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhH
Confidence 466788998 7999999999995 7999999999999999999999999 9999999999999999998864321110
Q ss_pred -ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 79 -~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 102 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 180 (280)
T 2f6q_A 102 KAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPA 180 (280)
T ss_dssp HHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHH
Confidence 001112334556 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 181 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 232 (280)
T 2f6q_A 181 KATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALR---------------------------- 232 (280)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875432
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhc
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~ 292 (539)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|
T Consensus 233 --------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 233 --------ISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp --------HHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred --------HHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 34667777666678899999999999999999999999999999986
No 46
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=6.6e-54 Score=423.01 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=222.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC-cccc
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (539)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688999 7999999999996 79999999999999999999999999999999999999999999987532211 1112
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 233345666 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|| +++.+++.++|++|++.||.+++
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~-------------------------------- 231 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVE-------------------------------- 231 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 99999999999999999999999 89999999999999999986543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhh
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr 290 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++.+|+|||
T Consensus 232 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 232 ----STKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred ----HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 446777777777788999999999999999999999999999987
No 47
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=6.8e-54 Score=425.37 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=216.5
Q ss_pred CCCCcEEEEEec-CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCC-
Q 009256 1 MAAPRVTMEVGN-DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA- 76 (539)
Q Consensus 1 M~~~~v~~~~~~-~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~- 76 (539)
|++++|.++. + ++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++......
T Consensus 24 ~~~~~v~~~~-~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 24 EGFEDIRYEK-STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp TTCSSEEEEE-ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCeEEEEE-ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 3567899999 6 899999999996 6999999999999999999999999999999999 599999999988542211
Q ss_pred CcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCH
Q 009256 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (539)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (539)
...........+++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|+|++|.
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~ 181 (289)
T 3t89_A 103 DDSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ 181 (289)
T ss_dssp -------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred hhhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH
Confidence 11111112244566 77999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 009256 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (539)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (539)
.+|+++++||++++|+||+++||||+|||++++.+++.++|++|+..||.+++
T Consensus 182 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~--------------------------- 234 (289)
T 3t89_A 182 KKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALR--------------------------- 234 (289)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999986543
Q ss_pred hCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|++++..... .....+.|.+.+..++.|+|++|++++|+|||+|++..
T Consensus 235 ---------~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 235 ---------CLKAALNADCDG-QAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp ---------HHHHHHHHTTSH-HHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred ---------HHHHHHHhhccc-chHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 345666654331 23344577888889999999999999999999998643
No 48
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=5.3e-54 Score=424.60 Aligned_cols=254 Identities=19% Similarity=0.289 Sum_probs=205.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC--CCc-
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~~- 78 (539)
|+.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 46788998 7999999999995 799999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchHHHHH-HHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 79 VSLMPDVSVEL-VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 79 ~~~~~~~~~~~-~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
...+....... + .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 165 (276)
T 2j5i_A 87 QEKIRREASQWQW-KLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHR 165 (276)
T ss_dssp HHHHHHHHHHHHT-TTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHH
Confidence 01111111222 3 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 166 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 217 (276)
T 2j5i_A 166 QSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR---------------------------- 217 (276)
T ss_dssp HHHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986543
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHH--hCCH-HHHhHHHHHHhhh--hccC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR--ATSK 294 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~--~~s~-~~~~~~~af~~kr--~~~~ 294 (539)
.+|+.++.....+++++++.|...+..+ +.|+ |++|++++|+||| +|++
T Consensus 218 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr~r~p~~ 271 (276)
T 2j5i_A 218 --------AAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDKSIKPGL 271 (276)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred --------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcccCCCCc
Confidence 4577888888888899999888887766 6799 9999999999998 5554
No 49
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=1.6e-53 Score=419.65 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=219.5
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC
Q 009256 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (539)
Q Consensus 1 M~~~~v~~~----~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~ 75 (539)
|+ +.+.++ . +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 44 578888 7 7999999999996 699999999999999999999999999999999999999999999862111
Q ss_pred CCcc----cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccc
Q 009256 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (539)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 151 (539)
.... ..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1110 01233455666 679999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHH
Q 009256 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231 (539)
Q Consensus 152 r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (539)
++|..+|+++++||++++|+||+++||||+| ++++.+++.+++++|++.||.+++
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~---------------------- 216 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLA---------------------- 216 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHH----------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHH----------------------
Confidence 8999999999999999999999999999999 889999999999999999986543
Q ss_pred HHHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 232 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|++
T Consensus 217 --------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 265 (267)
T 3oc7_A 217 --------------ASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNW 265 (267)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTT
T ss_pred --------------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 4467777777778899999999999999999999999999999999876
No 50
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=3.7e-54 Score=427.70 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=218.2
Q ss_pred CCCcEEEEEecCcEEEEEeC-CCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC--
Q 009256 2 AAPRVTMEVGNDGVAIITLI-NPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (539)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~-~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (539)
+|+.+.++. +++|++|||| ||+ .|+||.+|+.+|.++++.++.|+. |+|||||.|++||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 467789999 8999999999 685 699999999999999999998875 9999999999999999999986421110
Q ss_pred -cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCH
Q 009256 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (539)
Q Consensus 78 -~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (539)
....+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111222344566 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 009256 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (539)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (539)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------- 230 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLE--------------------------- 230 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999875443
Q ss_pred hCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHH-HhhhhccCCC
Q 009256 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 296 (539)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af-~~kr~~~~~~ 296 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++.+| ++||+|++.+
T Consensus 231 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 231 ---------ECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred ---------HHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 44677777766678899999999999999999999999999 9999998644
No 51
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=2.6e-54 Score=423.35 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=213.8
Q ss_pred EEEEEe-cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecC-CCCcccCCCchhhhhhcCCCcccccc
Q 009256 6 VTMEVG-NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMP 83 (539)
Q Consensus 6 v~~~~~-~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (539)
+.+..+ +++|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||. |++||+|+|++++..... .....+.
T Consensus 5 v~v~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~-~~~~~~~ 83 (260)
T 1sg4_A 5 VLVEPDAGAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSP-AHYAGYW 83 (260)
T ss_dssp EEEEEETTTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCH-HHHHHHH
T ss_pred EEEEEEecCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCH-HHHHHHH
Confidence 444432 6899999999998899999999999999999999999999999999 799999999998754211 1111222
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEee--CCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 84 ~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~--~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
...++++ .+|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 162 (260)
T 1sg4_A 84 KAVQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAER 162 (260)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHH
Confidence 3344566 67999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|+|++++.+++.+++++|+..||.+++
T Consensus 163 llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (260)
T 1sg4_A 163 ALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQ-------------------------------- 210 (260)
T ss_dssp HHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999875443
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|+|
T Consensus 211 ----~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 211 ----LTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp ----HHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred ----HHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 3456677666667888899999999999999999999999999999876
No 52
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=4.9e-54 Score=421.93 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=223.6
Q ss_pred CCcEEEEEecCcEEEEEeC-CCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCC---
Q 009256 3 APRVTMEVGNDGVAIITLI-NPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~-~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (539)
|+.+.++. +++|++|||| ||+ .|+||.+|+++|.+++++++.|+ +|+|||||.|++||+|+|++++.......
T Consensus 4 ~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 4 YRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred cceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 56789999 7999999999 685 79999999999999999999887 49999999999999999999886421111
Q ss_pred cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHH
Q 009256 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (539)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (539)
....+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 82 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 160 (261)
T 2gtr_A 82 ESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 160 (261)
T ss_dssp HHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHH
Confidence 0111222344566 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 009256 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (539)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (539)
+|++|++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 161 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 212 (261)
T 2gtr_A 161 SANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLE---------------------------- 212 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875443
Q ss_pred CCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++.+|++||+|++
T Consensus 213 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f 261 (261)
T 2gtr_A 213 --------ESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 261 (261)
T ss_dssp --------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC-
T ss_pred --------HHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4467777766667889999999999999999999999999999999874
No 53
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=5.6e-54 Score=432.50 Aligned_cols=256 Identities=24% Similarity=0.268 Sum_probs=188.2
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCC-------CcccCCCchhhhhh
Q 009256 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (539)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~-------~F~aG~Dl~~~~~~ 73 (539)
|+.|.++++ +++|++||||||+ +|+||.+|+++|.++|+.++.|+++|+|||||.|+ +||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 567999983 4899999999996 69999999999999999999999999999999996 89999999987432
Q ss_pred cCC----------CcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEee-CCceEeCCcccCCCCC
Q 009256 74 HGA----------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (539)
Q Consensus 74 ~~~----------~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p 142 (539)
... ...........+++ ++|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 110 00011111234566 67999999999999999999999999999999999 9999999999999999
Q ss_pred CcchhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHH
Q 009256 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222 (539)
Q Consensus 143 ~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (539)
++|++++|+|++|..+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~------------- 279 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQR------------- 279 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCC
Q 009256 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (539)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~ 296 (539)
.+|++++.... .+...+..|.+.+..++.|+|++|++.+|+|||+|++.+
T Consensus 280 -----------------------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~~ 329 (334)
T 3t8b_A 280 -----------------------MLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSP 329 (334)
T ss_dssp -----------------------HHHHHHHHTCC-CC-------------------------------------
T ss_pred -----------------------HHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 34667776543 455666778888899999999999999999999998643
No 54
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.6e-53 Score=416.61 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=221.6
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhc--CCCccccc
Q 009256 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH--GAGDVSLM 82 (539)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 82 (539)
+.++ +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... ........
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4556 5889999999996 79999999999999999999999999999999999999999999886531 11100011
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHH
Q 009256 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (539)
Q Consensus 83 ~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (539)
....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|..+|+++
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l 157 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDL 157 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHH
Confidence 01144566 679999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCch
Q 009256 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (539)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (539)
++||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 158 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 204 (253)
T 1uiy_A 158 LLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLR--------------------------------- 204 (253)
T ss_dssp HHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999875432
Q ss_pred hHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 205 ---~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~~ 253 (253)
T 1uiy_A 205 ---LTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPRF 253 (253)
T ss_dssp ---HHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCCC
Confidence 4577888888889999999999999999999999999999999998763
No 55
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=1e-53 Score=417.15 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=201.0
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEec-CCCCcccCCCchhhhhhcCCCcccccc
Q 009256 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (539)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (539)
+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 67788 7899999999995 79999999999999999999999999999999 999999999999986532111101222
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHH
Q 009256 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (539)
Q Consensus 84 ~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (539)
...++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|+|++|..+|++++
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2344566 67999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchh
Q 009256 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (539)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (539)
+||++++|+||+++||||+|+|++++.+++.+++++|++.||.+++
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 204 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFI---------------------------------- 204 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHH----------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhh
Q 009256 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (539)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~ 291 (539)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 205 --~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 205 --NTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred --HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 3466777776677889999999999999999999999999999984
No 56
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.3e-54 Score=421.34 Aligned_cols=247 Identities=25% Similarity=0.321 Sum_probs=193.1
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccc
Q 009256 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
+++.+.++. +++|++||||||+ +|+||.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++........ .
T Consensus 10 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~ 87 (258)
T 3lao_A 10 GPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASG-F 87 (258)
T ss_dssp SSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTB-C
T ss_pred CCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhh-H
Confidence 356799999 7999999999996 699999999999999999999999999999999999999999999876433221 1
Q ss_pred ccchHHHHHHHHHH-HhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHH
Q 009256 81 LMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 81 ~~~~~~~~~~~~~i-~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
.+.....+.+ .++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 88 ~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 166 (258)
T 3lao_A 88 RYPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166 (258)
T ss_dssp CCCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 2222222344 568 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|+|++++.+++.++|++|++.||.+++
T Consensus 167 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 216 (258)
T 3lao_A 167 MRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVR------------------------------ 216 (258)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999876543
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~ 287 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|+
T Consensus 217 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 217 ------AALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp ------HHHHHHHHHTC-------------------------------
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 457788888888999999999999999999999999999995
No 57
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=4.8e-54 Score=419.40 Aligned_cols=244 Identities=25% Similarity=0.379 Sum_probs=200.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.+.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... .
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~------~ 80 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT------E 80 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH------H
Confidence 56799999 8999999999996 69999999999999999999999999999999999999999999876431 1
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
..... .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 81 ----~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 81 ----LPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ----HHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 11223 4588999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|+|++++.+++.++|++|++.||.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVR-------------------------------- 203 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHH---HhCCHHHHhHHHHHHhhhhccC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKE---LVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~---~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++.....+++++++.|...+.. ...++|++|++.+|++||+|.+
T Consensus 204 ----~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 204 ----ALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 456778888888899999999999665 4778888999999999999886
No 58
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=3.5e-53 Score=420.25 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=222.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-cccCCCchhhhhhcCCCcc--
Q 009256 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGDV-- 79 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~~-- 79 (539)
++.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|+. ||+|+|++++.........
T Consensus 7 ~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 67899999 7999999999999999999999999999999999999999999999865 5567799998653221100
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 80 ~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
..+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|..+
T Consensus 86 ~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~ 164 (289)
T 3h0u_A 86 GPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGR 164 (289)
T ss_dssp STTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHH
Confidence 12333455677 7799999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhC
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (539)
|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 165 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~----------------------------- 215 (289)
T 3h0u_A 165 ALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALI----------------------------- 215 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999886543
Q ss_pred CCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHh
Q 009256 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 288 (539)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~ 288 (539)
.+|+.++.... +++++++.|...+..++.|+|++|++++|+|
T Consensus 216 -------~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 216 -------AAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -------HHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------HHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 45677888777 8999999999999999999999999999999
No 59
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=1.7e-53 Score=417.65 Aligned_cols=254 Identities=33% Similarity=0.428 Sum_probs=224.4
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc
Q 009256 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 2 ~~~~v~~~~~--~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (539)
+|+.+.++.. .++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 80 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQD- 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHH-
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchH-
Confidence 4667777762 5789999999995 79999999999999999999999999999999999999999999875321100
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
.+...+...+ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 81 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 81 --CYSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp --HHHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 0000011223 4588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhC
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (539)
|+++++||++++|+||+++||||+|+|++++.+++.+++++|+..||.+++
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 208 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVA----------------------------- 208 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999875443
Q ss_pred CCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.+...+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 209 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~~ 258 (260)
T 1mj3_A 209 -------MAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANFK 258 (260)
T ss_dssp -------HHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45788888888899999999999999999999999999999999988753
No 60
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-53 Score=413.82 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=212.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccc
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (539)
++.|.++. +++|++||||||+ .|+||.+|+.+|.++++++++| ++|+|||||.|++||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 35688999 7999999999996 7999999999999999999988 999999999999999999998311 1122
Q ss_pred cchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHH
Q 009256 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 82 ~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 334455666 7799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
|++||++++|+||+++||||+|++ .+++.++|++|++.||.+++
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~-------------------------------- 214 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQ-------------------------------- 214 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999997 46789999999999886543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|+.++.. .++++.++.|...+..++.|+|++|++.+|+|||+|++.
T Consensus 215 ----~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~ 262 (264)
T 3he2_A 215 ----HAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKFQ 262 (264)
T ss_dssp ----HHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 346677765 357788899999999999999999999999999999864
No 61
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=5.2e-53 Score=414.60 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=207.0
Q ss_pred CCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcC--C-C-
Q 009256 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--A-G- 77 (539)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~-~- 77 (539)
+++.+.++..+++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... . .
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (263)
T 3l3s_A 4 SQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGR 83 (263)
T ss_dssp ----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSH
T ss_pred CccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccH
Confidence 45667777657899999999996699999999999999999999999999999999999999999998865321 0 1
Q ss_pred -cccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCH
Q 009256 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (539)
Q Consensus 78 -~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (539)
....+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|.
T Consensus 84 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~ 161 (263)
T 3l3s_A 84 AFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGR 161 (263)
T ss_dssp HHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCH
Confidence 1112233345666 67999999999999999999999999999999999999999999999999 56789999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 009256 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (539)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (539)
.+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 162 ~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------- 214 (263)
T 3l3s_A 162 RAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLR--------------------------- 214 (263)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999876543
Q ss_pred hCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhh
Q 009256 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289 (539)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~k 289 (539)
.+|+.++.....+++++++.|...+..++.|+|++|+++||.+.
T Consensus 215 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 215 ---------RGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ---------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ---------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 45788888888899999999999999999999999999999864
No 62
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=9.9e-53 Score=414.16 Aligned_cols=246 Identities=28% Similarity=0.435 Sum_probs=216.6
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
|+ +.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 44 5789999 7999999999996699999999999999999999999999999999999999999999875421 1122
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHH
Q 009256 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (539)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (539)
.+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2333445666 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCC
Q 009256 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (539)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (539)
++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 226 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALA------------------------------- 226 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999876543
Q ss_pred chhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhcc--CCC
Q 009256 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS--KVP 296 (539)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~--~~~ 296 (539)
.+|++++.....+++++++.|...+..++.|+ |||+|+ +..
T Consensus 227 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~~~f~g 269 (277)
T 4di1_A 227 -----AAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDGRGPGG 269 (277)
T ss_dssp -----HHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC---------
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCcCcCCC
Confidence 45788888888999999999999999999998 999988 543
No 63
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=1.3e-52 Score=413.84 Aligned_cols=254 Identities=26% Similarity=0.416 Sum_probs=221.3
Q ss_pred CcEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCCCc
Q 009256 4 PRVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD 78 (539)
Q Consensus 4 ~~v~~~~---~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~ 78 (539)
..+.++. .+++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~ 86 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SE 86 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HH
Confidence 3455553 25789999999996 7999999999999999999999999999999998 79999999998754221 11
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
...+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 87 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 165 (272)
T 1hzd_A 87 VGPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSL 165 (272)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHH
Confidence 112223344566 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchH----HHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHH
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l----~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (539)
|+++++||++++|+||+++||||+|+|++++ .+.+.+++++|+..||.+++
T Consensus 166 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~~------------------------- 220 (272)
T 1hzd_A 166 AKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMR------------------------- 220 (272)
T ss_dssp HHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHH-------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999875 45778888888887764432
Q ss_pred HHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCC
Q 009256 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (539)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~ 295 (539)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 221 -----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~ 270 (272)
T 1hzd_A 221 -----------VAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYK 270 (272)
T ss_dssp -----------HHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCCC
T ss_pred -----------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 45778888888889999999999999999999999999999999998863
No 64
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=4.7e-52 Score=405.68 Aligned_cols=243 Identities=19% Similarity=0.299 Sum_probs=206.1
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccc
Q 009256 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (539)
Q Consensus 5 ~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (539)
.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... .....
T Consensus 8 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 84 (254)
T 3isa_A 8 PLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLRM 84 (254)
T ss_dssp SEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHHH
T ss_pred eEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHHH
Confidence 488999 8999999999996 799999999999999999987 5899999999999999999999986532111 11111
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHH
Q 009256 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (539)
Q Consensus 84 ~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (539)
...++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|+|++|..+|++++
T Consensus 85 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ 160 (254)
T 3isa_A 85 VRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSIL 160 (254)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHH
Confidence 2234556 679999999999999999999999999999999999999999999999998 479999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchh
Q 009256 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (539)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (539)
+||++++|+||+++||||+|||++++.+++.++++++++.|+.+++
T Consensus 161 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 206 (254)
T 3isa_A 161 GSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA---------------------------------- 206 (254)
T ss_dssp TTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999876543
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccCCCC
Q 009256 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (539)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~~~~ 297 (539)
.+|+.+. ++.++.|...+..++.++|++|++.+|++||+|+|.+.
T Consensus 207 --~~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~~ 251 (254)
T 3isa_A 207 --TLHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHHH 251 (254)
T ss_dssp --HHHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC--------
T ss_pred --HHHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCCC
Confidence 2344442 34567788999999999999999999999999998653
No 65
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-51 Score=422.23 Aligned_cols=290 Identities=22% Similarity=0.307 Sum_probs=226.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCCCc--
Q 009256 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (539)
.+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 45688998 7999999999996 7999999999999999999999999999999998 89999999999865321111
Q ss_pred ccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH
Q 009256 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (539)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (539)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111222223555 67999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcc------------------------
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT------------------------ 214 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~------------------------ 214 (539)
|++|++||++|+|+||+++||||+|||++++.+.+..+++ +...++..+..+++.
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998876554432 111111111111000
Q ss_pred -cccCChHHHHHHH-----HHHHHHHH-HhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 009256 215 -DKLGSLSEAREVL-----KLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (539)
Q Consensus 215 -~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~ 287 (539)
-..+...+..+.+ .++...++ -......+...+|+.++.+...+++++++.|...+..++.|+|++||+++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 0000001000011 11112222 2334445788899999999999999999999999999999999999999999
Q ss_pred -hh-hhccCCC
Q 009256 288 -AQ-RATSKVP 296 (539)
Q Consensus 288 -~k-r~~~~~~ 296 (539)
+| |+|++.+
T Consensus 321 ~eK~r~P~~~~ 331 (363)
T 3bpt_A 321 IDKDQSPKWKP 331 (363)
T ss_dssp TSCCCCCCCSS
T ss_pred eCCCCCCCCCC
Confidence 78 8888754
No 66
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=6.7e-52 Score=428.23 Aligned_cols=287 Identities=18% Similarity=0.229 Sum_probs=227.2
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC-CCcccCCCchhhhhhcCC-----
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA----- 76 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~----- 76 (539)
+.|.++. +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 42 ~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 42 QTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred ceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 3466666 7899999999996 6999999999999999999999999999999999 799999999998653210
Q ss_pred -CcccccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 77 -GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 77 -~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
.....+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 121 ~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g 199 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG 199 (407)
T ss_dssp CHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence 11112222234555 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHH---H----------------HHHHHHHHHhcC----c-------
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARR----K------- 205 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~---~----------------a~~~a~~la~~~----~------- 205 (539)
.+|++|++||++|+|+||+++||||+|||++++.+ + +.++++++.... +
T Consensus 200 -~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~ 278 (407)
T 3ju1_A 200 -KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAES 278 (407)
T ss_dssp -THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHT
T ss_pred -HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHH
Confidence 99999999999999999999999999999999887 3 333443332211 0
Q ss_pred -hhhhhhhcccccCChHHHHHHH-------HHHHHH-HHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCC
Q 009256 206 -PWIRSLHRTDKLGSLSEAREVL-------KLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 276 (539)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s 276 (539)
..+..++. .++.+..+.+ .++... .+-......+...+|+.++++...+++++++.|...+..++.+
T Consensus 279 ~~~I~~~f~----~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s 354 (407)
T 3ju1_A 279 QEMIDRLMA----GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK 354 (407)
T ss_dssp HHHHHHHTC----SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence 01111111 1111111001 011111 1122345668889999999999999999999999999999999
Q ss_pred HHHHhHHHHHH-hh-hhccCCCC
Q 009256 277 DTSRGLVHVFF-AQ-RATSKVPN 297 (539)
Q Consensus 277 ~~~~~~~~af~-~k-r~~~~~~~ 297 (539)
+|++||++||+ +| |+|+|.+.
T Consensus 355 ~D~~EGvrAflidKdr~P~w~~~ 377 (407)
T 3ju1_A 355 GDFCEGVRALLIDKDKQPKWQFA 377 (407)
T ss_dssp SSHHHHHHHHTTSCCCCCCCSSS
T ss_pred HHHHHHHHHHHhcCCcCCCCCCC
Confidence 99999999998 88 89988763
No 67
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=1.5e-51 Score=399.43 Aligned_cols=238 Identities=23% Similarity=0.296 Sum_probs=213.7
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccch
Q 009256 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (539)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (539)
..++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~-- 79 (243)
T 2q35_A 5 QLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV-- 79 (243)
T ss_dssp EEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC--
T ss_pred EEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH--
Confidence 34566 7899999999995 79999999999999999999999999999999999999999999886532211 1 11
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHH
Q 009256 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (539)
Q Consensus 85 ~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 164 (539)
++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+++++
T Consensus 80 --~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 156 (243)
T 2q35_A 80 --LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIY 156 (243)
T ss_dssp --CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred --HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHH
Confidence 2345 6689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCchhH
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (539)
||++++|+||+++||||+|+|++++.+++.++++++++.||.+++
T Consensus 157 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 201 (243)
T 2q35_A 157 TGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLV----------------------------------- 201 (243)
T ss_dssp HCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHH-----------------------------------
T ss_pred cCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 009256 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (539)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~ 287 (539)
.+|+.++.....+++++++.|...+..++.|+|++|++++|+
T Consensus 202 -~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 202 -ALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred -HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 346677776666788999999999999999999999999874
No 68
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=2.8e-51 Score=406.22 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=205.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCc-
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (539)
|+|+.+.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 5667899999 7999999999995 799999999999999999999999999999999999999999998854211110
Q ss_pred --cc---ccc----hHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEee-CCceEeCCcccCCCCCCcchhh
Q 009256 79 --VS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPGFGGTQ 148 (539)
Q Consensus 79 --~~---~~~----~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~Gl~p~~g~~~ 148 (539)
.. .+. ...++++ .+|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 00 011 1123555 67999999999999999999999999999999999 9999999999999999999999
Q ss_pred ccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcc-----hHHHHHH-HHHHHHHhcCchhhhhhhcccccCChHH
Q 009256 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 222 (539)
Q Consensus 149 ~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~-----~l~~~a~-~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (539)
+|+|++|..+|+++++||++++|+||+++||||+|||++ ++.+++. +++++|++.||.+++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~------------- 230 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCL------------- 230 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHH-------------
Confidence 999999999999999999999999999999999999985 7888885 999999999886543
Q ss_pred HHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
.+|+.++... ...++ ...++|+++++.+|++||+|..
T Consensus 231 -----------------------~~K~~l~~~~----~~~l~--------~~~~~d~~e~~~af~~kr~~e~ 267 (280)
T 1pjh_A 231 -----------------------GMKKLLKSNH----IDAFN--------KANSVEVNESLKYWVDGEPLKR 267 (280)
T ss_dssp -----------------------HHHHHHHTTT----HHHHH--------HHHHHHHHHHHHHHHHTHHHHH
T ss_pred -----------------------HHHHHHHHhH----HHHHH--------HhhhHHHHHHHHHHhCCccHHH
Confidence 3355555432 22222 1357899999999999998843
No 69
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=2.7e-50 Score=394.09 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=204.8
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccc
Q 009256 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
++.+.++. ++ +|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 56688999 67 99999999995 69999999999999999999999999999999999999999999875421111111
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeC-CcccCCCCCCcchhhccccccCHHHH
Q 009256 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKA 159 (539)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~-pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (539)
.+.....+++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1222234566 6799999999999999999 5999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCC
Q 009256 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (539)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (539)
+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 228 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLR------------------------------ 228 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999876543
Q ss_pred CchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhh
Q 009256 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (539)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr 290 (539)
.+|+.++.....+++++++.| ...||+++|++||
T Consensus 229 ------~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~ 262 (263)
T 2j5g_A 229 ------YTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRN 262 (263)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC
T ss_pred ------HHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhcc
Confidence 345666665555555555544 4569999999987
No 70
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=3e-50 Score=387.88 Aligned_cols=230 Identities=23% Similarity=0.253 Sum_probs=201.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (539)
|+ +.|.++. +++|++||||||+.|+||.+|+++|.++++++++| ++|+|||||.|++||+|+|++++..... ....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~-~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA-KPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C-HHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh-HHHH
Confidence 55 5789999 79999999999988999999999999999999987 6999999999999999999999865321 1122
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHH
Q 009256 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (539)
Q Consensus 81 ~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (539)
.+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2333445666 779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCC
Q 009256 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (539)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (539)
++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 206 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHN------------------------------- 206 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999886543
Q ss_pred chhHHHHHHHHHHhhcCCchhHHHHHHHHHH
Q 009256 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 271 (539)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~ 271 (539)
.+|+.++.....+++++++.|...|.
T Consensus 207 -----~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 207 -----ATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp -----HHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 44667777777778888888877663
No 71
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=8.6e-50 Score=384.44 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=199.9
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccc
Q 009256 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (539)
+.+.++. +++|++||||||+.|++|.+|+++|.+++++++.| +|+|||||.|++||+|+|++++.... .....+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~--~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSA--EAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCH--HHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhCh--HHHHHHH
Confidence 4588898 79999999999988999999999999999999976 48999999999999999999987521 1122233
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHH
Q 009256 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (539)
Q Consensus 84 ~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (539)
...++++ +++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|+++++++|++++|..+|+++
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3445666 7799999999999999999999999999999999998 8999999999999888889999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCch
Q 009256 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (539)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (539)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHK--------------------------------- 206 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986543
Q ss_pred hHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 009256 243 QHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (539)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~e~~~~ 270 (539)
.+|+.++.....+++++++.|.+.|
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 207 ---KTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 4567788887788889998887754
No 72
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=4.4e-49 Score=393.05 Aligned_cols=232 Identities=23% Similarity=0.349 Sum_probs=219.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHH-HHHHHhhcccccCCc-cC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~-~~ 384 (539)
.++||+|||+|.||++||..++.+|++|++||++++.++++.+.+++.+..++++|.++.. ..+..+++++.++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4679999999999999999999999999999999999999999999999999999988754 566677899999998 67
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCC
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t 464 (539)
+++||+||||+||++++|+++|++|++++++++||+||||++++++++..+.+|+|++|+||||||+.+++|||++++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCceeEEE-cCcccchhhcchHHHHHHHHHHHHcCC-CHHHHHHHH-HhCCCC---cchhhccccC
Q 009256 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQEGGCW 538 (539)
Q Consensus 465 ~~e~~~~~~~l~~~lg~~~v~v-~~~~g~v~nrl~~~~~~Ea~~l~~~G~-~~~~id~a~-~~~g~~---~Gpf~~~d~~ 538 (539)
++++++++..+++.+|+.|+++ +|.|||++||++.++++||++++++|+ +++|||++| .++|+| ||||+++|..
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999865 899999999999999999999999986 999999999 688886 9999999975
No 73
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=1.7e-48 Score=389.94 Aligned_cols=254 Identities=19% Similarity=0.193 Sum_probs=214.9
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEecCCCCcccCCCchhhh
Q 009256 3 APRVTMEVG-NDGVAIITLINPP-----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (539)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-----~Nal~~~~~~~l~~~~~~~~~-----d~~v~~vvl~g~g~~F~aG~Dl~~~~ 71 (539)
|+++.+..+ +++|++||||||+ +|+||.+|+.+|.++++.++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 456666443 7899999999994 459999999999999999987 58999999999999999999999986
Q ss_pred hhcCCCcccc---cchHHHHHHHHHH---HhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcc
Q 009256 72 KVHGAGDVSL---MPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFG 145 (539)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~i---~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g 145 (539)
.......... +.......+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 5421111111 111122223 223 468999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHH
Q 009256 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 225 (539)
Q Consensus 146 ~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~ 225 (539)
++++|+|++|..+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++ +|.++
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~----------------- 249 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAW----------------- 249 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHH-----------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHHH-----------------
Confidence 999999999999999999999999999999999999999999999999999999986 55432
Q ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhccC
Q 009256 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (539)
Q Consensus 226 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~~~ 294 (539)
..+|+.++.....+++++++.|...+..++.|+|....+..++-+++.++
T Consensus 250 -------------------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~ 299 (305)
T 3m6n_A 250 -------------------AAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRR 299 (305)
T ss_dssp -------------------HHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred -------------------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhc
Confidence 24578888888999999999999999999999999888887776666554
No 74
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=2.2e-48 Score=393.79 Aligned_cols=204 Identities=25% Similarity=0.334 Sum_probs=174.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|+|++|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 3567899999 7999999999996 7999999999999999999999999999999999999999999998653221100
Q ss_pred -----------------------------cccchHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCce
Q 009256 80 -----------------------------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (539)
Q Consensus 80 -----------------------------~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~ 130 (539)
..+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 00112233445 568999999999999999999999999999999999999
Q ss_pred EeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh
Q 009256 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (539)
Q Consensus 131 f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (539)
|++||+++|++|++| +|++++|..+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~ 265 (333)
T 3njd_A 190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLI 265 (333)
T ss_dssp EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999876 5899999999999999999999999999999999999999999999999999999987654
No 75
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=2.7e-48 Score=379.26 Aligned_cols=237 Identities=18% Similarity=0.237 Sum_probs=201.3
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCccccc
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (539)
+.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689999 7899999999995 6999999999999999999999999999999999999999999987531 11111112
Q ss_pred chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeC-CcccCCCCCCcchhhccccccCHHHHHH
Q 009256 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (539)
Q Consensus 83 ~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~-pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (539)
.....+++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 22234566 6799999999999999999 5999999999999999999999 9999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccCChHHHHHHHHHHHHHHHHhCCCc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (539)
+++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 219 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARR-------------------------------- 219 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999886543
Q ss_pred hhHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhCCHHHHhHHHHHHhhhh
Q 009256 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (539)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~ 291 (539)
.+|+.++.....+++++++.|. ..|++.+|-.+-+
T Consensus 220 ----~~K~~l~~~~~~~l~~~l~~~~-----------~~eg~~a~~~~~~ 254 (257)
T 1szo_A 220 ----YARKVLTRQLRRVMEADLSLGL-----------AHEALAAIDLGME 254 (257)
T ss_dssp ----HHHHHHSHHHHHHHHHHHHHHH-----------HHHHHHHHHHC--
T ss_pred ----HHHHHHHhhhhccHHHHHHHHH-----------HHhhhhhhhcccc
Confidence 3456666655555666665554 3378888877644
No 76
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=3.2e-48 Score=399.89 Aligned_cols=246 Identities=23% Similarity=0.214 Sum_probs=200.7
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecC--------C-CCcccCCCchhhhhh
Q 009256 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (539)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~--------g-~~F~aG~Dl~~~~~~ 73 (539)
+.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 7999999999995 799999999999999999999999999999994 6 799999999998653
Q ss_pred cCCCccc---ccchHHHHHHHHHH------------HhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccC
Q 009256 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (539)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~i------------~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~ 138 (539)
....... ........++ +.+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001122333 333 47999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhcccccC
Q 009256 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG 218 (539)
Q Consensus 139 Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~ 218 (539)
|++|++| +++|+|++|..+|++|++||++|+|+||+++||||+|||++++.+++.+++++++. .++
T Consensus 325 Gl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~Av---------- 390 (440)
T 2np9_A 325 GIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---DAV---------- 390 (440)
T ss_dssp CCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---HHH----------
T ss_pred CcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---HHH----------
Confidence 9999887 68999999999999999999999999999999999999999999999999887742 211
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhhcCCch---hHHHHHHHHHHHHhCCHHHHhHHHHHHhhhhc
Q 009256 219 SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGY---SGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (539)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~l~~e~~~~~~~~~s~~~~~~~~af~~kr~~ 292 (539)
..+|+.++.... +++ +.++.|...+..++.|+|++|++.+|+|||+.
T Consensus 391 --------------------------~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 391 --------------------------LANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp --------------------------HHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred --------------------------HHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 134566665543 332 45667778888999999999999999999863
No 77
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=3.3e-47 Score=376.29 Aligned_cols=205 Identities=27% Similarity=0.346 Sum_probs=174.6
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcc
Q 009256 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (539)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (539)
|+++.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4567899999 7999999999996 7999999999999999999999999999999999999999999998654321111
Q ss_pred -ccc---chHHHHHHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccC
Q 009256 80 -SLM---PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (539)
Q Consensus 80 -~~~---~~~~~~~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 155 (539)
..+ .....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+++++.+ +|++|
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG 172 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELG 172 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcC
Confidence 111 11233455 6799999999999999999999999999999999999999999999999 55555544 99999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh
Q 009256 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (539)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (539)
..+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 173 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~ 226 (279)
T 3t3w_A 173 PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALR 226 (279)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999886543
No 78
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=1.3e-44 Score=377.07 Aligned_cols=233 Identities=32% Similarity=0.542 Sum_probs=220.6
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 009256 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (539)
Q Consensus 304 ~~~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (539)
.+++++||+|||+|.||++||..|+++|++|++||++++ +..+.+++.++.++++|.++.++.+..+++++++++++
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH
Confidence 457789999999999999999999999999999999998 45556777888899999999988888889999999998
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCC
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~ 463 (539)
++++||+||+|+||++++|+.+++++.+++++++||+||||++++++++..+.+|++++|+|||+|++.++++||+++..
T Consensus 127 al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~ 206 (460)
T 3k6j_A 127 KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSH 206 (460)
T ss_dssp GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSS
T ss_pred HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHH-HcCCCHHHHHHHHHhCCCCcchhhccccCC
Q 009256 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRIDSAIRSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 464 t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~-~~G~~~~~id~a~~~~g~~~Gpf~~~d~~~ 539 (539)
|++++++++.++++.+|+.|++++|.+||++||++.++++||+.++ ++|+++++||++++++|+|||||+++|.++
T Consensus 207 Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~~G~pmGPf~l~D~vG 283 (460)
T 3k6j_A 207 TSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNG 283 (460)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTBSSCHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCcCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999 559999999999998999999999999753
No 79
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=8.8e-42 Score=361.24 Aligned_cols=233 Identities=36% Similarity=0.550 Sum_probs=223.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
.++||+|||+|+||.+||..|+++|++|++||+++++++.+.+++.+.+.+++++|.++..+.+..++++++++++++++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALA 83 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHhc
Confidence 46799999999999999999999999999999999999999999999999999999999988888889999999998899
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcH
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~ 466 (539)
+||+||+|+|++.++|+.+++++.+++++++|++||+|+++++.++..+.+|++++|+|||+|++.++++|++++..|++
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts~ 163 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAA 163 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCCH
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCCH
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcCC-CHHHHHHHH-HhCCCCcchhhccccCC
Q 009256 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 467 e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~-~~~~id~a~-~~~g~~~Gpf~~~d~~~ 539 (539)
++++++.++++.+|+.++++++.+||++||++.++++|++.++++|. ++++||+++ .++|+|||||+++|.++
T Consensus 164 e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~G 238 (483)
T 3mog_A 164 EVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIG 238 (483)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999975 999999999 58999999999999754
No 80
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=8.9e-43 Score=361.45 Aligned_cols=204 Identities=25% Similarity=0.333 Sum_probs=183.9
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEec-CCCCcccCCCchh
Q 009256 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (539)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-----------~Nal~~~~~~~l~~~~~~~~~d-~~v~~vvl~g-~g~~F~aG~Dl~~ 69 (539)
++++.++. +++|++||||||+ .|++|.+|+.+|.+++++++.| +++|+||||| .|++||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 45688998 7999999999996 5999999999999999999999 9999999999 8999999999999
Q ss_pred hhhhcCCCcccccchHHHHHHHHHH----HhCCCcEEEEEcCccccchhHhhhccCEEEeeCC--ceEeCCccc-CCCCC
Q 009256 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (539)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~Gl~p 142 (539)
+...... ....+....++++ .+| .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|
T Consensus 99 l~~~~~~-~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTHA-WKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCHH-HHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred HhhcccH-HHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 8653211 1112223344556 668 9999999999999999999999999999999999 999999999 99999
Q ss_pred Ccchhhccc--cccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh
Q 009256 143 GFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (539)
Q Consensus 143 ~~g~~~~l~--r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (539)
++|++++|+ |++|..+|++++++|++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~ 245 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAH 245 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHh
Confidence 999999999 9999999999999999999999999999999999999999999999999999987764
No 81
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=2e-41 Score=340.56 Aligned_cols=232 Identities=23% Similarity=0.343 Sum_probs=212.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCH-HHHHHHhhcccccCCc-cC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ-DKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~-~~ 384 (539)
.++||+|||+|+||.+||..|+++||+|++||+++++++.+.+.+.+.+..+++.|.++. ......++++++++++ ++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 467999999999999999999999999999999999999999988888888888775432 1123455778888888 67
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCC
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t 464 (539)
+++||+||+|+|++.++|+.+++++.+++++++||+|++|++++++++..+.+|.+++|+|||+||+.++++|+++++.|
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~t 164 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCceeEEE-cCcccchhhcchHHHHHHHHHHHHcCC-CHHHHHHHH-HhCCCC---cchhhccccC
Q 009256 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQEGGCW 538 (539)
Q Consensus 465 ~~e~~~~~~~l~~~lg~~~v~v-~~~~g~v~nrl~~~~~~Ea~~l~~~G~-~~~~id~a~-~~~g~~---~Gpf~~~d~~ 538 (539)
+++++++++++++.+|+.|+++ ++.+||++||++.++++||+.++++|+ ++++||+++ .++|+| +|||+++|..
T Consensus 165 ~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl~ 244 (319)
T 2dpo_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHhc
Confidence 9999999999999999999999 589999999999999999999999975 999999999 679987 8999999975
No 82
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=5.4e-41 Score=355.26 Aligned_cols=263 Identities=33% Similarity=0.511 Sum_probs=229.5
Q ss_pred CCHHHHhHHHHHHhhhhccCCCCC--Cc-CCCCCCCcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 275 MLDTSRGLVHVFFAQRATSKVPNV--TD-IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 275 ~s~~~~~~~~af~~kr~~~~~~~~--~~-~~~~~~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
.|++++..++.|+.+|..+|.++. +. .+..++.+++|+|||+|.||.+||..|+++|++|++||++++.++.+.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 379999999999999998885531 11 223456788999999999999999999999999999999999999988887
Q ss_pred HHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 009256 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (539)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i 431 (539)
+..+..+++.|.++..+.+.. ....+++++++++||+||+|+|++.++++.+++++.++++++++|++|||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~--~~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKP--KLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC--CEEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHH--HhhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 777766666553322111111 122356667789999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHc
Q 009256 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 511 (539)
Q Consensus 432 ~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~ 511 (539)
+..+.+|++++|+|||+|++.++++|+++++.|++++++.++++++.+|+.++++++.+||++||++.++++|++.++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 98888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhCCCCcchhhccccCC
Q 009256 512 GVDVFRIDSAIRSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 512 G~~~~~id~a~~~~g~~~Gpf~~~d~~~ 539 (539)
|+++++||++++++|+|+|||+++|.++
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~G 266 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAG 266 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHC
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcc
Confidence 9999999999999999999999999753
No 83
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=3.1e-40 Score=328.51 Aligned_cols=233 Identities=28% Similarity=0.370 Sum_probs=218.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcC-CCCHHHHHHHhhcccccCCc-cC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.++||+|||+|.||.+||..|+++|++|++||++++.++.+.+.+.+.+..+++.+ .++....+...++++.++++ +.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 46799999999999999999999999999999999999999999888888888887 77777777777888888888 56
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCC
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t 464 (539)
+++||+||+++|++.+.++.+++++.++++++++++|++|++++++++..+.++.+++|+||++|++.++++|++++..|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCceeEEE-cCcccchhhcchHHHHHHHHHHHHcCC-CHHHHHHHH-HhCCCCcchhhccccCC
Q 009256 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 465 ~~e~~~~~~~l~~~lg~~~v~v-~~~~g~v~nrl~~~~~~Ea~~l~~~G~-~~~~id~a~-~~~g~~~Gpf~~~d~~~ 539 (539)
++++++.++++++.+|+.++++ ++.|||++||++.++++||+.++++|+ ++++||+++ .++|+|+|||+++|.++
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~G 240 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVG 240 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhcc
Confidence 9999999999999999999999 799999999999999999999999975 999999999 68999999999999754
No 84
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=2.7e-38 Score=317.67 Aligned_cols=237 Identities=34% Similarity=0.515 Sum_probs=215.5
Q ss_pred CCCCCcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHH-----HHHHHhhccc
Q 009256 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLK 377 (539)
Q Consensus 303 ~~~~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~i~ 377 (539)
.|...|+||+|||+|.||.+||..|+++|++|++||+++++++.+.+.+.+.++.+++.|.++.. .......+++
T Consensus 10 ~~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 35556789999999999999999999999999999999999999888888888888888877654 3444456788
Q ss_pred ccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCee
Q 009256 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456 (539)
Q Consensus 378 ~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~v 456 (539)
.++++ +++++||+||+|+|++.++++.+++++.++++++++|++++|++++++++..+.++++++++||++|++.++++
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 88888 48999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcC-CCHHHHHHHH-HhCCCCcchhhc
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG-VDVFRIDSAI-RSFGLPIGPFQE 534 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G-~~~~~id~a~-~~~g~~~Gpf~~ 534 (539)
|+++++.+++++++.+.++++.+|+.++++++.+||++||++.++++|++.++++| +++++||.++ .++|+|+|||++
T Consensus 170 ~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~ 249 (302)
T 1f0y_A 170 EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFEL 249 (302)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999996 6999999999 789999999999
Q ss_pred cccCC
Q 009256 535 GGCWS 539 (539)
Q Consensus 535 ~d~~~ 539 (539)
+|.++
T Consensus 250 ~D~~G 254 (302)
T 1f0y_A 250 LDYVG 254 (302)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 99753
No 85
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.8e-39 Score=319.00 Aligned_cols=209 Identities=31% Similarity=0.416 Sum_probs=192.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
+||+|||+|.||++||.+|+ +|++|++||++++.++++.+.+ .+..+++++++++++++++|
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l-----------------~~~~~~~i~~~~~~~~~~~a 74 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQI-----------------PEELLSKIEFTTTLEKVKDC 74 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHS-----------------CGGGGGGEEEESSCTTGGGC
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHH-----------------HHHHhCCeEEeCCHHHHcCC
Confidence 58999999999999999999 9999999999999988875530 12233567778888669999
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHH
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 468 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~ 468 (539)
|+||+|+||+.++|+.+++++.+. +++|+++|+|+++++.++..+.+|.+++|+|||+|++.++++|+++++.|++++
T Consensus 75 DlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~~ 152 (293)
T 1zej_A 75 DIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSKT 152 (293)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHHH
T ss_pred CEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHHH
Confidence 999999999999999999999877 899999999999999999888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcCCCHHHHHHHH-HhCCCCc---chhhccccCC
Q 009256 469 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQEGGCWS 539 (539)
Q Consensus 469 ~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~~~~~id~a~-~~~g~~~---Gpf~~~d~~~ 539 (539)
+++++++++.+|+.|++++|. |++||++.++++||+.++++|+++++||+++ .++|+|+ |||+++|.++
T Consensus 153 ~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~G 225 (293)
T 1zej_A 153 VAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIG 225 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhc
Confidence 999999999999999999986 9999999999999999999999999999999 6899999 9999999753
No 86
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.86 E-value=1.2e-22 Score=220.38 Aligned_cols=169 Identities=20% Similarity=0.207 Sum_probs=144.4
Q ss_pred cCcEEEEEeCCCC-CCC--CCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHH
Q 009256 12 NDGVAIITLINPP-VNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (539)
Q Consensus 12 ~~~v~~i~l~~p~-~Na--l~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (539)
+++|++|++|+|. .|+ ++..+.++|.++|+.++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 5789999999994 677 7899999999999999999999999999874 477775421 1234
Q ss_pred HHHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcc------------cCCCCCCc------------
Q 009256 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPGF------------ 144 (539)
Q Consensus 89 ~~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~Gl~p~~------------ 144 (539)
.+ +++..++|||||+|+|.|+|||+.|+++||++||++++.|+.+++ ++|+.|+.
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 55 568889999999999999999999999999999999999999985 68987643
Q ss_pred -chh---------------hccccccCHHH-----HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHH
Q 009256 145 -GGT---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198 (539)
Q Consensus 145 -g~~---------------~~l~r~vG~~~-----a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~ 198 (539)
+.+ .++++.+|..+ +.+++++|+.++|+||+++||||+|++.+++.+.+.+++.
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~ 516 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK 516 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence 233 56788899888 9999999999999999999999999998888887777543
No 87
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.83 E-value=2e-20 Score=180.32 Aligned_cols=168 Identities=18% Similarity=0.180 Sum_probs=129.9
Q ss_pred cCcEEEEEeCCC-CCCCCCHH-------HHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccc
Q 009256 12 NDGVAIITLINP-PVNALAIP-------IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (539)
Q Consensus 12 ~~~v~~i~l~~p-~~Nal~~~-------~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (539)
+++|++|+++.+ ..+.-... .+++|.++|+.+..|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 578999999887 22210111 35899999999999999999999986 6788876432
Q ss_pred hHHHHHHHHHHHh-CCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCC---------------------cccCCCC
Q 009256 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (539)
Q Consensus 84 ~~~~~~~~~~i~~-~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~p---------------------e~~~Gl~ 141 (539)
...+.+ +.+.. ++|||||+++|.|.|||++|+++||++||++++.|+.+ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 123445 45777 89999999999999999999999999999999999999 6677777
Q ss_pred CCcchhh--------------------------ccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHH
Q 009256 142 PGFGGTQ--------------------------RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 195 (539)
Q Consensus 142 p~~g~~~--------------------------~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 195 (539)
++.+..+ .-.|.+......+ +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 7665332 1234455554444 789999999999999999999998888777666
Q ss_pred HHH
Q 009256 196 WAL 198 (539)
Q Consensus 196 ~a~ 198 (539)
++.
T Consensus 223 ~~~ 225 (240)
T 3rst_A 223 DHK 225 (240)
T ss_dssp HCG
T ss_pred HhC
Confidence 653
No 88
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.81 E-value=3.8e-20 Score=184.32 Aligned_cols=189 Identities=15% Similarity=0.163 Sum_probs=139.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.|+||+|||+|.||.+||.+|+++||+|++|||++++.+.+.+ .| .+..+++ +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~-----------~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------AG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------TT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------cC-------------CEEcCCHHHHH
Confidence 3679999999999999999999999999999999998887633 22 3445555 678
Q ss_pred CCcCEEEEcccCChhHHHHHHHH--HHHhCCCCeEEEecCCCCChH--HHhhccCCCCcEEEeccCCCCC--------CC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSE--LEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAH--------VM 453 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~--l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~~~r~vg~h~~~p~~--------~~ 453 (539)
++||+||.|+|++.++...++.. +.+.++++.++++.++..+.. +++..+... |.+|.+.|- .+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~G 133 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAAG 133 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHHT
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHhC
Confidence 99999999999888776666542 677788899888655544332 344433221 455655552 34
Q ss_pred CeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCc-ccc---hhhcchH----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 009256 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (539)
Q Consensus 454 ~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~-~g~---v~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~-~ 523 (539)
.+..++.| +++++++++++++.+|+.++++++. .|. ++|+++. ..+.|++.+++. |++++.+-+++ .
T Consensus 134 ~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~ 210 (300)
T 3obb_A 134 TLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRR 210 (300)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred CEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 56667777 7899999999999999999999863 232 3455543 234599999977 99999999998 4
Q ss_pred hCC
Q 009256 524 SFG 526 (539)
Q Consensus 524 ~~g 526 (539)
+.+
T Consensus 211 ~~~ 213 (300)
T 3obb_A 211 SSG 213 (300)
T ss_dssp STT
T ss_pred Ccc
Confidence 443
No 89
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.81 E-value=1.1e-19 Score=172.28 Aligned_cols=148 Identities=23% Similarity=0.302 Sum_probs=125.8
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHH
Q 009256 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (539)
Q Consensus 12 ~~~v~~i~l~~p~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (539)
.+.|++|+++. +++..+.+.|.++|+.++++ ++|+|+|+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 46899999985 79999999999999999864 6999999875 667766432 2455
Q ss_pred HHHHhCCCcEEEEE---cCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhh---------------ccccc
Q 009256 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQ---------------RLPRL 153 (539)
Q Consensus 92 ~~i~~~~~p~iaav---~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~---------------~l~r~ 153 (539)
+.|..++||||++| +|.|.|+|+.|+++||+++++++++|+.++...+. |..|.+. .+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999 99999999999999999999999999999987532 5555432 36677
Q ss_pred cCH--HHHHHHHHcCCCCCHHHHHHcCCcceecCc
Q 009256 154 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186 (539)
Q Consensus 154 vG~--~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 186 (539)
.|. .++.+++.+++.++|+||+++||||+|+++
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 885 889999999999999999999999999975
No 90
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.79 E-value=1.3e-18 Score=172.09 Aligned_cols=153 Identities=16% Similarity=0.128 Sum_probs=130.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.+||+|||+|+||.+|+..|+++|+ +|++||+++++++.+.+.+ .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~-----------------------gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC-----------------------GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT-----------------------CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc-----------------------CCEEeCChHH
Confidence 3589999999999999999999999 9999999999887764310 23344454 6
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHh-CCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeee-eecC
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRT 461 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~-~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~ve-i~~~ 461 (539)
.+++||+||+|+| ++....+++++.++ ++++++|+|++++++++.++..+..+.++++.||+.|...+..++ ++++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999997 56688999999998 888989999999999999998888878999999999998888776 5678
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEE
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVV 486 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v 486 (539)
+.++++.++.++++++.+|+.+ ++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~-~v 161 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVI-WV 161 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEE-EC
T ss_pred CCCCHHHHHHHHHHHHHCCCeE-EE
Confidence 8899999999999999999854 44
No 91
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.78 E-value=2.5e-19 Score=178.44 Aligned_cols=191 Identities=12% Similarity=0.065 Sum_probs=130.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
+||||||+|.||.+||.+|+++||+|++|||++++.+.+. +.| ....+++ +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-----------~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLT-----------KLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTT-----------TTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----------HcC-------------CeEeCCHHHHHhc
Confidence 4899999999999999999999999999999998876542 222 3344555 77899
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCeeeeecC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVRT 461 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~vei~~~ 461 (539)
||+||.|+|++..+...+...+.+.++++.++++.++..|-. +++..+. +.-+++.......+ ..+.+..++.+
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG 141 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSG 141 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeeccc
Confidence 999999999888777766677888888998887655544432 3333332 22233333222221 12334445555
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCccc--c---hhhcchH----HHHHHHHHHHHc-CCCHHHHHHHH-HhCC
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTG--F---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g--~---v~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~-~~~g 526 (539)
+++.+++++++++.+|+.++++++.+| . ++|+++. ..+.|++.+++. |++++.+-+++ .+.+
T Consensus 142 ---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~ 214 (297)
T 4gbj_A 142 ---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLF 214 (297)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTT
T ss_pred ---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcc
Confidence 789999999999999999999986554 2 3355543 345699999977 99999999998 4433
No 92
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.75 E-value=6.5e-18 Score=164.08 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=143.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC----eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~----~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+||+|||+|.||.+++..|.++|+ +|++||+++++++.+.+.. .+...++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChHH
Confidence 589999999999999999999998 9999999999887764321 23344454 6
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCC-eeeeecCC
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 462 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~-~vei~~~~ 462 (539)
.+++||+||+|+| +...+.+++++.++++++++|+|.+++++...++..+..+.++++.||+.|..... .+.+++++
T Consensus 60 ~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 6789999999996 55577888889888999999999999999988888777677899999999888776 66777888
Q ss_pred CCcHHHHHHHHHHHHHcCceeEEEcCcc-----cchhh-cchHHHHHHHHHH--HHcCCCHHHHHHHH
Q 009256 463 RTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN-RAFFPYSQSARLL--VSLGVDVFRIDSAI 522 (539)
Q Consensus 463 ~t~~e~~~~~~~l~~~lg~~~v~v~~~~-----g~v~n-rl~~~~~~Ea~~l--~~~G~~~~~id~a~ 522 (539)
.++++.++.++++++.+|+ ++++.+.. +.... ..+...+.|++.. .+.|+++++..+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55664321 11110 1122344566554 35599999877776
No 93
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.75 E-value=8.4e-18 Score=168.27 Aligned_cols=192 Identities=15% Similarity=0.121 Sum_probs=137.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
+|+||+|||+|.||.+||..|+++|++|++||+++++++.+.+ . .+..+++. +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------A-------------GASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------T-------------TCEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeEcCCHHHHH
Confidence 3579999999999999999999999999999999998777633 1 23445555 667
Q ss_pred CCcCEEEEcccCChhHHHHHHH--HHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC----CCCCee
Q 009256 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPLL 456 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~--~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~----~~~~~v 456 (539)
++||+||+|+|++..++..+.. ++.+.++++++|++.++..+.. .+...+. ...+++.. |+.+. ..+.++
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~ 136 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLT 136 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCce
Confidence 8999999999977665544431 6778888888887655544433 3444332 22345553 32221 123345
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcC-cccch---hhcchH----HHHHHHHHHHHc-CCCHHHHHHHH-HhCC
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g~v---~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~-~~~g 526 (539)
.++.+ +++.++.++++++.+|+.++++++ ..+.. +|+++. ..++|++.+++. |++++++++++ .+.+
T Consensus 137 ~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 213 (302)
T 2h78_A 137 FMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSG 213 (302)
T ss_dssp EEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT
T ss_pred EEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 55555 789999999999999999999976 33332 566554 477899999977 89999999999 4443
No 94
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.74 E-value=1.9e-18 Score=173.55 Aligned_cols=193 Identities=10% Similarity=0.061 Sum_probs=137.8
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
..|+||+|||+|.||.+||..|+++|++|++||+++++++.+.+ . .+...+++ +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------H-------------GASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCeEcCCHHHH
Confidence 45679999999999999999999999999999999998777632 1 23445555 66
Q ss_pred CCCcCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCee
Q 009256 385 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~v 456 (539)
+++||+||+|+|++..++..++ +++.+.++++++|++.++..+.. .+...+. ....++..+.+..+ ..++++
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~ 154 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLI 154 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEE
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeE
Confidence 7899999999997766665444 56778888999887655543332 2332221 22234442211111 123455
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc------chhhcchH---HHHHHHHHHHHc-CCCHHHHHHHH-HhC
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAFF---PYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g------~v~nrl~~---~~~~Ea~~l~~~-G~~~~~id~a~-~~~ 525 (539)
.++++ +++.+++++++++.+|+.++++++ +| ++.|.++. ..++|++.+++. |++++++.+++ .+.
T Consensus 155 i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 230 (310)
T 3doj_A 155 ILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGA 230 (310)
T ss_dssp EEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHST
T ss_pred EEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 56666 689999999999999999999986 44 44455533 456899999977 99999999999 444
Q ss_pred C
Q 009256 526 G 526 (539)
Q Consensus 526 g 526 (539)
+
T Consensus 231 ~ 231 (310)
T 3doj_A 231 M 231 (310)
T ss_dssp T
T ss_pred c
Confidence 3
No 95
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.73 E-value=6.2e-18 Score=168.68 Aligned_cols=184 Identities=19% Similarity=0.172 Sum_probs=134.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
+||+|||+|.||.+||..|+++||+|++||+++++++.+.+ ..+..++++ +.++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~------------------------~g~~~~~~~~~~~~- 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE------------------------AGATLADSVADVAA- 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH------------------------TTCEECSSHHHHTT-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH------------------------CCCEEcCCHHHHHh-
Confidence 48999999999999999999999999999999998776633 124455666 5567
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCeeeeecC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVRT 461 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~vei~~~ 461 (539)
||+||+|+|++..++ .+++++.+.++++++|++.++..+.. .+...+. ...+++..+.+.++ ..+.+..++.+
T Consensus 71 aDvvi~~vp~~~~~~-~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg 149 (296)
T 3qha_A 71 ADLIHITVLDDAQVR-EVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGA 149 (296)
T ss_dssp SSEEEECCSSHHHHH-HHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEEC
T ss_pred CCEEEEECCChHHHH-HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecC
Confidence 999999999766554 45588888999999888666544432 3333332 22234443322222 22355666666
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCccc------chhhcchH---HHHHHHHHHHHc-CCCHHHH------HHHH
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAFF---PYSQSARLLVSL-GVDVFRI------DSAI 522 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g------~v~nrl~~---~~~~Ea~~l~~~-G~~~~~i------d~a~ 522 (539)
+++.+++++++++.+|+.++++++ +| ++.|.++. ..++|++.+++. |++++++ .+++
T Consensus 150 ---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 150 ---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 789999999999999999999976 34 34455543 457899999977 9999999 8887
No 96
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.73 E-value=2e-18 Score=173.87 Aligned_cols=193 Identities=17% Similarity=0.228 Sum_probs=149.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+||+|||+|.||.++|..|+.+|+ +|++||+++++++.....+..... ... ...++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~-~~~-----------~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV-MFG-----------STSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH-HHT-----------CCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh-hcC-----------CCcEEEECCCHHHhCC
Confidence 489999999999999999999999 999999999887764222211110 000 0134566677788999
Q ss_pred cCEEEEcc--------------cCChhHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhhccCC-CCcEEEeccCCCC
Q 009256 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 450 (539)
Q Consensus 388 aDlVi~av--------------pe~~~~~~~~~~~l~~~~~~~~ii--~s~ts~~~~~~i~~~~~~-~~r~vg~h~~~p~ 450 (539)
||+||+++ +++..+++.+++++.++++ ++++ ++|++.+....+++.... |+|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7788899999999999975 7766 455555544555555554 6788764
Q ss_pred CCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccchhhc---chHHHHHHH-------HHHHHcCC-CHHHHH
Q 009256 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 519 (539)
Q Consensus 451 ~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nr---l~~~~~~Ea-------~~l~~~G~-~~~~id 519 (539)
.|+.++......+.+.+|+. .++.+||++|+ .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36788888888899999987 48999999999 888999998 88889985 999999
Q ss_pred HHHHhCCCCcchhhcccc
Q 009256 520 SAIRSFGLPIGPFQEGGC 537 (539)
Q Consensus 520 ~a~~~~g~~~Gpf~~~d~ 537 (539)
++++.. ++|||++.|.
T Consensus 211 ~~~~~~--~~~~~ei~~~ 226 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADN 226 (317)
T ss_dssp HHHHHH--HHHHHHHHHH
T ss_pred HHHHHH--HhhHHHHHHh
Confidence 998432 7899999873
No 97
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.73 E-value=4e-17 Score=163.38 Aligned_cols=192 Identities=13% Similarity=0.127 Sum_probs=135.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
.+||+|||+|.||.+||..|+++|++|++||+++++++.+.+ .| ....++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 358999999999999999999999999999999998877633 12 11214455 6789
Q ss_pred CcCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccC-CCC---CCCCeee
Q 009256 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF-SPA---HVMPLLE 457 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~-~p~---~~~~~ve 457 (539)
+||+||+|+|++..++..++ +++.+.++++++|++.++..+.. .+...+. ....++. +|. ..+ ..+.+..
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999997766655444 56778888999887655543322 3333332 2234554 332 222 1234455
Q ss_pred eecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc------chhhcch---HHHHHHHHHHHHc-CCCHHHHHHHH-HhCC
Q 009256 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (539)
Q Consensus 458 i~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g------~v~nrl~---~~~~~Ea~~l~~~-G~~~~~id~a~-~~~g 526 (539)
++++ +++.+++++++++.+|+.++++++.+| ++.|.+. .+.++|++.+++. |++++++.+++ .+.+
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 219 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAG 219 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 6665 789999999999999999999986444 2334432 3457899999977 99999999999 4433
No 98
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.72 E-value=7.3e-18 Score=167.48 Aligned_cols=191 Identities=13% Similarity=0.051 Sum_probs=135.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
+||+|||+|.||.++|..|+++|++|++||+++++.+.+.+ ..+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~------------------------~g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA------------------------LGAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH------------------------TTCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH------------------------CCCeecCCHHHHHhc
Confidence 48999999999999999999999999999999998777633 124445566 66789
Q ss_pred cCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCeeeee
Q 009256 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIV 459 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~vei~ 459 (539)
||+||+|+|++..++..++ +++.+.++++++|++.++..+.. .+...+. ....++..+.+.++ ..+.++.++
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~ 137 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILA 137 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEE
Confidence 9999999997666665554 67888999999887665443322 2322222 22345442222222 123445566
Q ss_pred cCCCCcHHHHHHHHHHHHHcCceeEEEcC-cccc---hhhcchH----HHHHHHHHHHHc-CCCHHHHHHHH-HhCC
Q 009256 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g~---v~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~-~~~g 526 (539)
.+ +++.+++++++++.+|+.++++++ ..+. ++|+++. ..++|++.+++. |++++++.+++ .+.+
T Consensus 138 gg---~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~ 211 (287)
T 3pef_A 138 AG---DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAM 211 (287)
T ss_dssp EE---CHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTT
T ss_pred eC---CHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 65 789999999999999999999976 2222 2344433 467899999977 99999999999 4443
No 99
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.72 E-value=1e-16 Score=160.88 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=124.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.++||+|||+|.||.++|..|.++|+ +|++||++++.++.+.+ .|..+ ..++++ +
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~-----------~G~~~-----------~~~~~~~~ 89 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-----------LGIID-----------EGTTSIAK 89 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-----------TTSCS-----------EEESCTTG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-----------CCCcc-----------hhcCCHHH
Confidence 45799999999999999999999999 99999999988776532 22211 224455 5
Q ss_pred -CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhccCCCCcEEEeccCCCCC---------
Q 009256 384 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH--------- 451 (539)
Q Consensus 384 -~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~~~r~vg~h~~~p~~--------- 451 (539)
.+++||+||+|+|.+. ...+++++.++++++++|++.+|... ...+...++ .++++.||+.++.
T Consensus 90 ~~~~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~~ 165 (314)
T 3ggo_A 90 VEDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSLD 165 (314)
T ss_dssp GGGGCCSEEEECSCGGG--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCCT
T ss_pred HhhccCCEEEEeCCHHH--HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhhh
Confidence 6899999999999654 56788999999999999988776543 345555443 3899999988653
Q ss_pred ---CCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 452 ---VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 452 ---~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
.+..+.+++++.++++.+++++++++.+|+.++++++
T Consensus 166 ~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 205 (314)
T 3ggo_A 166 NLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 205 (314)
T ss_dssp TTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred hhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3567888898889999999999999999999998853
No 100
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.72 E-value=7.5e-18 Score=169.28 Aligned_cols=188 Identities=13% Similarity=0.070 Sum_probs=128.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
..++||+|||+|.||.+||..|+++|+ +|++||++ +++.+.+.+ . .+...++.
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~-----------~-------------g~~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE-----------L-------------GVSCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH-----------T-------------TCEECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH-----------C-------------CCEEeCCH
Confidence 346799999999999999999999999 99999997 455554321 1 23344555
Q ss_pred -cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccCC---CCcEEEeccCCCC--CCCC
Q 009256 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS---QDRIIGAHFFSPA--HVMP 454 (539)
Q Consensus 383 -~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~---~~r~vg~h~~~p~--~~~~ 454 (539)
+.+++||+||+|+|++... .++.++.+.++++++|+++++..+.. .+...+.. ..+++....+.++ ..+.
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 6678999999999987755 46788999999999988766654433 22222211 2234443222221 2236
Q ss_pred eeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccc-----hhhcchH----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 009256 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (539)
Q Consensus 455 ~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~-----v~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~-~ 523 (539)
+..+++++.+ +.++++++.+|+.++++++.+|. ++|+++. ..++|++.+++. |++++ +-+.+ .
T Consensus 156 l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~-~~~~l~~ 229 (312)
T 3qsg_A 156 VPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADR-VLASLDA 229 (312)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH-HHHHHHH
T ss_pred EEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHh
Confidence 6677777532 88999999999999999875552 3344433 667899999988 99985 44556 4
Q ss_pred hC
Q 009256 524 SF 525 (539)
Q Consensus 524 ~~ 525 (539)
+.
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 44
No 101
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.71 E-value=2.4e-17 Score=166.20 Aligned_cols=191 Identities=14% Similarity=0.121 Sum_probs=134.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++||+|||+|.||.+||..|+++|++|++||+++++++.+.+ . .+..++++ +.++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~e~~~ 86 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------L-------------GATIHEQARAAAR 86 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------T-------------TCEEESSHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCEeeCCHHHHHh
Confidence 468999999999999999999999999999999998776532 1 23445566 6688
Q ss_pred CcCEEEEcccCChhHHHHHHH-HHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCeeeee
Q 009256 387 DVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIV 459 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~-~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~vei~ 459 (539)
+||+||+|+|++..++..+.. ++.+.++++++|++.+++.+.. .+...+. ...+++..+.+.++ ..+++..++
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMA 166 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEe
Confidence 999999999976665544432 6777888888887666544432 2333222 22234443222211 223455666
Q ss_pred cCCCCcHHHHHHHHHHHHHcCceeEEEcC-ccc----chhhcch---HHHHHHHHHHHHc-CCCHHHHHHHH-HhCC
Q 009256 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~-G~~~~~id~a~-~~~g 526 (539)
.+ +++++++++++++.+ +.++++++ ..| ++.|.++ .+.++|++.+++. |++++++.+++ .+.+
T Consensus 167 gg---~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 239 (320)
T 4dll_A 167 GG---KPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFA 239 (320)
T ss_dssp ES---CHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTT
T ss_pred CC---CHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccc
Confidence 66 789999999999999 88999976 223 2334433 2457899999977 99999999999 4443
No 102
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.71 E-value=2.1e-17 Score=164.15 Aligned_cols=191 Identities=13% Similarity=0.094 Sum_probs=134.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
|+||+|||+|.||.+||..|+++||+|++||+++++.+.+.+. .+..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~------------------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL------------------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH------------------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC------------------------CCeecCCHHHHHH
Confidence 4689999999999999999999999999999999987776431 23445555 6678
Q ss_pred CcCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCCC---CCCeeee
Q 009256 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~~---~~~~vei 458 (539)
+||+||+|+|++..++..++ +++.+.+++++++++.++..+.. .+...+. ...+++..+.+.++. .+.+..+
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIIL 136 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEE
Confidence 99999999997766655544 56778888888887655543332 2333222 222344432222221 1234445
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCceeEEEcC-ccc----chhhcch---HHHHHHHHHHHHc-CCCHHHHHHHH-HhC
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~-G~~~~~id~a~-~~~ 525 (539)
+.+ +++.+++++++++.+|+.++++++ ..| ++.|.++ ...++|++.+++. |++++++.+++ .+.
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 210 (287)
T 3pdu_A 137 AAG---DQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGA 210 (287)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EeC---CHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 555 789999999999999999999976 222 2335443 3456799999977 99999999999 444
No 103
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.70 E-value=6.6e-17 Score=158.68 Aligned_cols=199 Identities=10% Similarity=0.023 Sum_probs=142.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||..++..|++.|++ |.+||+++++++.+.+.+ .+...+++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 4799999999999999999999999 999999998877653321 13334555 6678
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCC-----CCCCeeeeecC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 461 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~-----~~~~~vei~~~ 461 (539)
+||+||+|+|++. ...+++++.+.++++++|++++++.+.+.++..+..+ -..|++.|. ...+.+.++-
T Consensus 68 ~~Dvvi~av~~~~--~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDSA--FAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHY---GVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHHH--HHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSE---EEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHHH--HHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhc---cCcCCceecCCCchhhcCCCeEEE-
Confidence 9999999999663 4788888988888999999999998887766555432 124555531 1112222221
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCc--ccc-----hhhcch--HHHHHHHHHHHHcCCCHHHHHHHH-Hh------C
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-RS------F 525 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~--~g~-----v~nrl~--~~~~~Ea~~l~~~G~~~~~id~a~-~~------~ 525 (539)
..++++.++.++++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .. .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2358899999999999999999999754 356 667775 344456632 35699888875554 11 2
Q ss_pred ---CCCcchhhcccc
Q 009256 526 ---GLPIGPFQEGGC 537 (539)
Q Consensus 526 ---g~~~Gpf~~~d~ 537 (539)
+.++||++..|.
T Consensus 221 ~~~~~~~GP~~r~d~ 235 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDE 235 (266)
T ss_dssp CHHHHCCSTTTTTCH
T ss_pred ChhhhCCCCCccCCH
Confidence 347899988874
No 104
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.65 E-value=6.2e-16 Score=154.87 Aligned_cols=186 Identities=10% Similarity=0.027 Sum_probs=131.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++||+|||+|.||.+||..|+++|++|++||+++++++.+.+. .+...+++ +.++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~------------------------g~~~~~~~~e~~~ 64 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA------------------------GAHLCESVKAALS 64 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH------------------------TCEECSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC------------------------CCeecCCHHHHHh
Confidence 4689999999999999999999999999999999988776331 12334455 6678
Q ss_pred CcCEEEEcccCChhHHHHHHH--HHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC-CC--CCeeee
Q 009256 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA-HV--MPLLEI 458 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~--~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~-~~--~~~vei 458 (539)
+||+||+|+|++..++..+ . .+... .++++|++.++..+.. .+...+. ...+|+..+.+.++ .. ..++.+
T Consensus 65 ~aDvVi~~vp~~~~~~~v~-~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~ 142 (306)
T 3l6d_A 65 ASPATIFVLLDNHATHEVL-GMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSI 142 (306)
T ss_dssp HSSEEEECCSSHHHHHHHH-TSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEE
T ss_pred cCCEEEEEeCCHHHHHHHh-cccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEE
Confidence 9999999999766655444 4 46554 5777777655544432 3333222 23356655333322 11 134445
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCceeEEE--cC--cccchhhcch---HHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~v~v--~~--~~g~v~nrl~---~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+++ +++.+++++++++.+|..++++ ++ ..|.+.|.++ ...++|++.+++. |++++++.+++
T Consensus 143 ~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~ 211 (306)
T 3l6d_A 143 HTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLL 211 (306)
T ss_dssp EEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 555 7899999999999998899999 75 5567777332 2456799999977 99999999888
No 105
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.63 E-value=2.6e-15 Score=148.93 Aligned_cols=188 Identities=13% Similarity=0.040 Sum_probs=134.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
|++|+|||+ |.||.+++..|+++|++|++||+++++++.+.+ .| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHhc
Confidence 569999999 999999999999999999999999988766532 11 22222336788
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCC--------CCCe---
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 455 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~--------~~~~--- 455 (539)
+||+||+|+|++. ...+++++.+.++++++|++.+++.+...+.. .....++++.||+.|+. ....
T Consensus 67 ~aDvVi~av~~~~--~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALPDNI--IEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSCHHH--HHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCCchH--HHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 9999999999554 67888899988999999998777776666554 33335799899988765 2222
Q ss_pred -----eeeecCCCCcHHHHHHHHHHHHHcCc---eeEEEcCc-ccc----hhhcchHHH---HHHHHHHH-Hc-CCCHHH
Q 009256 456 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGNC-TGF----AVNRAFFPY---SQSARLLV-SL-GVDVFR 517 (539)
Q Consensus 456 -----vei~~~~~t~~e~~~~~~~l~~~lg~---~~v~v~~~-~g~----v~nrl~~~~---~~Ea~~l~-~~-G~~~~~ 517 (539)
..++.+..++++.++.++++++.+|. .++++++. .+. +.|-...++ +.|++... .. |+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 22333334688999999999999999 88888642 222 234343333 33655443 44 999888
Q ss_pred HHHHH
Q 009256 518 IDSAI 522 (539)
Q Consensus 518 id~a~ 522 (539)
+-+.+
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76665
No 106
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.63 E-value=2e-15 Score=152.32 Aligned_cols=188 Identities=13% Similarity=0.058 Sum_probs=135.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC----CeEEEEeCChH--HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G----~~V~~~d~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (539)
++||+|||+|.||.+||..|+++| ++|++||++++ +++.+.+ . .+..+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~-----------~-------------G~~~~~~ 77 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK-----------M-------------GVKLTPH 77 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH-----------H-------------TCEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH-----------c-------------CCEEeCC
Confidence 358999999999999999999999 89999999986 6555421 1 1333444
Q ss_pred c-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCC---CCcEEEeccCCCCCCCCeee
Q 009256 382 Y-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLLE 457 (539)
Q Consensus 382 ~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~---~~r~vg~h~~~p~~~~~~ve 457 (539)
. +.+++||+||+|+| +.....++.++.+.++++++|++.+++++...+...+.. ..++++.++..|........
T Consensus 78 ~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~ 155 (322)
T 2izz_A 78 NKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGAT 155 (322)
T ss_dssp HHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEE
T ss_pred hHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeE
Confidence 4 66789999999998 455778888999889889999998888888766655432 35788999988776655444
Q ss_pred ee-cCCCCcHHHHHHHHHHHHHcCceeEEEcCcc----cc--hhhcchHHHHHHHHH--HHHcCCCHHHHHHHH
Q 009256 458 IV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCT----GF--AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (539)
Q Consensus 458 i~-~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~----g~--v~nrl~~~~~~Ea~~--l~~~G~~~~~id~a~ 522 (539)
++ +++.++++.++.++++++.+|..+++..+.- +. ..|.+++ .+.|++. ..+.|+++++..+++
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~-~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAF-TALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 44 6777789999999999999998665432211 11 1133333 3344443 235599888766655
No 107
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.63 E-value=7.2e-16 Score=146.09 Aligned_cols=157 Identities=8% Similarity=0.009 Sum_probs=122.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
.+||+|||+|+||++||..|.++|++|++||+. +.+.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~~ 43 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIRD 43 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhcc
Confidence 458999999999999999999999999999983 11457
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHH
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e 467 (539)
|| |+|+|++ ....+++++.++++++++|++++.+.....+........+|++.||+.... .-+..+ +++
T Consensus 44 aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~~----~~i~a~---d~~ 112 (232)
T 3dfu_A 44 FE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQDR----WVASAL---DEL 112 (232)
T ss_dssp CS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETTE----EEEEES---SHH
T ss_pred CC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCCc----eeeeCC---CHH
Confidence 88 8899976 356788899999999999987665555554444444566899999864321 113333 788
Q ss_pred HHHHHHHHHHHcCceeEEEc--Ccccc----hhhcchHHHHHHHHHHH---HcCC-CHHH
Q 009256 468 VILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFR 517 (539)
Q Consensus 468 ~~~~~~~l~~~lg~~~v~v~--~~~g~----v~nrl~~~~~~Ea~~l~---~~G~-~~~~ 517 (539)
.++.++++++.+|.++++++ +.++| ..++.+.++.++|..++ ++|+ +++|
T Consensus 113 a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d 172 (232)
T 3dfu_A 113 GETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSD 172 (232)
T ss_dssp HHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhh
Confidence 99999999999999999985 45565 44777888999999998 8887 8887
No 108
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.62 E-value=4.9e-16 Score=163.25 Aligned_cols=205 Identities=17% Similarity=0.154 Sum_probs=136.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CC-eEEEEeCChH----HHHHHHHHH------HHHHHhhHhcCCCCHHHHHHHhh
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 374 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~----~~~~~~~~i------~~~~~~~~~~~~~~~~~~~~~~~ 374 (539)
+++||+|||+|.||.++|.+|+++ || +|++||++++ +++.+.+.. +..+..++++. ...+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~--------~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKV--------VKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHH--------HHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhh--------cccC
Confidence 457999999999999999999999 99 9999999999 877764310 01111111100 0125
Q ss_pred cccccCCccCCCCcCEEEEcccCCh----------hHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhh-----ccC
Q 009256 375 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGE-----KTS 436 (539)
Q Consensus 375 ~i~~~~~~~~~~~aDlVi~avpe~~----------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~-----~~~ 436 (539)
++.++++.+++++||+||+|||++. .......+.+.++++++++|+.. |++++. .+.. ...
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~-STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE-STITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC-SCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe-CCCChHHHHHHHHHHHHHhcC
Confidence 6788888888999999999998763 23455667899999999988744 455543 2221 111
Q ss_pred C--CCcE-EEeccCCCCCCCC--e-------eeeecCCCCcHHHHHHHHHHHHHc-CceeEEEcCcc-----cchhhcch
Q 009256 437 S--QDRI-IGAHFFSPAHVMP--L-------LEIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCT-----GFAVNRAF 498 (539)
Q Consensus 437 ~--~~r~-vg~h~~~p~~~~~--~-------vei~~~~~t~~e~~~~~~~l~~~l-g~~~v~v~~~~-----g~v~nrl~ 498 (539)
. ...+ +. ++|....+ . ..|+.| .+++..+.++++++.+ ++.++++++.. .++.|-++
T Consensus 168 ~~~~~d~~v~---~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~ 242 (478)
T 3g79_A 168 LKAGEDFALA---HAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR 242 (478)
T ss_dssp CCBTTTBEEE---ECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE---eCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH
Confidence 1 0111 11 12221111 1 023333 2788889999999999 88888886522 23445443
Q ss_pred ---HHHHHHHHHHHHc-CCCHHHHHHHH-HhC
Q 009256 499 ---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (539)
Q Consensus 499 ---~~~~~Ea~~l~~~-G~~~~~id~a~-~~~ 525 (539)
.+++||+..+++. |+++.++-+++ ...
T Consensus 243 a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 243 DLQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 3778999999987 99999999998 444
No 109
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.62 E-value=9.2e-15 Score=146.95 Aligned_cols=190 Identities=13% Similarity=0.059 Sum_probs=128.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CeEEEEeCChH---HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc-CCc
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSE---YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDY 382 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 382 (539)
++||+|||+|.||.++|..|+++| ++|++||++++ +.+...+. ..+.| + .. +..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~-------~~~~g-------------~-~~~s~~ 82 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRAR-------AAELG-------------V-EPLDDV 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHH-------HHHTT-------------C-EEESSG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHH-------HHHCC-------------C-CCCCHH
Confidence 468999999999999999999999 99999999983 22222111 11112 2 22 233
Q ss_pred cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC--CCCCeee
Q 009256 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA--HVMPLLE 457 (539)
Q Consensus 383 ~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~--~~~~~ve 457 (539)
+.+++||+||+|+|++... ..+.++.+.++++++|++.++..+.. .+...+. ...+++....+.|+ ..+.+..
T Consensus 83 e~~~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i 160 (317)
T 4ezb_A 83 AGIACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPI 160 (317)
T ss_dssp GGGGGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEE
T ss_pred HHHhcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEE
Confidence 7789999999999977654 34588889999999888766443332 3333332 22345554333332 2445666
Q ss_pred eecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc------chhhcc---hHHHHHHHHHHHHc-CCCHHHHHHHHHhC
Q 009256 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAIRSF 525 (539)
Q Consensus 458 i~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g------~v~nrl---~~~~~~Ea~~l~~~-G~~~~~id~a~~~~ 525 (539)
+++++. + ++++++++.+|+.++++++.+| ++.|-+ ..+.++|++.+++. |++++.++.+..+.
T Consensus 161 ~vgg~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 161 LVAGRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp EEESTT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred EEeCCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 777743 2 8899999999999999987555 233433 34667899999977 99996555554443
No 110
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.62 E-value=1.1e-15 Score=161.77 Aligned_cols=202 Identities=12% Similarity=0.088 Sum_probs=140.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH----HHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE----ANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+... ..+...+. .....+++.+++++ +
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~--------~~~~~~~l~~ttd~~~ 80 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIA--------RNRSAGRLRFSTDIEA 80 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHH--------HHHHTTCEEEECCHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHH--------HhcccCCEEEECCHHH
Confidence 48999999999999999999999999999999999888754210 00000000 00012457788888 6
Q ss_pred CCCCcCEEEEcccC--------ChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH---HhhccC----CC---CcEEEec
Q 009256 384 EFKDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS----SQ---DRIIGAH 445 (539)
Q Consensus 384 ~~~~aDlVi~avpe--------~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~---i~~~~~----~~---~r~vg~h 445 (539)
++++||+||+|||+ |....+.+++++.++++++++|+.. |++++.. +...+. .+ ..+ ..
T Consensus 81 a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~-STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v 157 (478)
T 2y0c_A 81 AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK-STVPVGTAERVRAAVAEELAKRGGDQMF--SV 157 (478)
T ss_dssp HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC-SCCCTTHHHHHHHHHHHHHHHTTCCCCE--EE
T ss_pred HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCcCCCchHHHHHHHHHHhcCCCCCccE--EE
Confidence 78999999999997 4478888999999999999988654 4665532 221111 11 122 12
Q ss_pred cCCCCCCCCee---------eeecCCCCcH----HHHHHHHHHHHHcCc--eeEEEcC-----cccchhhcch---HHHH
Q 009256 446 FFSPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYS 502 (539)
Q Consensus 446 ~~~p~~~~~~v---------ei~~~~~t~~----e~~~~~~~l~~~lg~--~~v~v~~-----~~g~v~nrl~---~~~~ 502 (539)
.++|....+.. .++.|. +++ +..+.+.++++.+++ .++++.+ ..+++.|.++ .+++
T Consensus 158 ~~~Pe~~~eG~~~~~~~~p~~iviG~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~ 236 (478)
T 2y0c_A 158 VSNPEFLKEGAAVDDFTRPDRIVIGC-DDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFM 236 (478)
T ss_dssp EECCCCCCTTCHHHHHHSCSCEEEEC-CSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEChhhhcccceeeccCCCCEEEEEE-CCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444443332 244333 234 789999999998775 5777764 4467778775 5788
Q ss_pred HHHHHHHHc-CCCHHHHHHHH
Q 009256 503 QSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 503 ~Ea~~l~~~-G~~~~~id~a~ 522 (539)
||+..+++. |++++++.+++
T Consensus 237 nE~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 237 NELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHH
Confidence 999999987 99999999888
No 111
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.62 E-value=1e-15 Score=161.74 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=102.7
Q ss_pred cCCCCChHHHhhccCCCCcEEEeccCCCCCCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccchhhcchHHH
Q 009256 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 501 (539)
Q Consensus 422 ~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~ 501 (539)
.+++.+.++. ...+|.++++.|+++ .+++|+++++.|++++++.+..+++.+|+.|+.++|.+||++||+++++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 5667777666 345678999999987 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CHHHHHHHH-HhCCCCcchhhccccCC
Q 009256 502 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 502 ~~Ea~~l~~~G~-~~~~id~a~-~~~g~~~Gpf~~~d~~~ 539 (539)
+|||.+++++|+ +++|||.+| .|+|||+|||+|+|.++
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~G 437 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLG 437 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhC
Confidence 999999999998 999999999 89999999999999764
No 112
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.61 E-value=1.7e-15 Score=149.59 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=126.4
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHH
Q 009256 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (539)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (539)
|+++..+.. ..|+++..+.+.+.++++.+.++ .+++|+|++.| |+|+++.... + ..+..++ .+
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~a 183 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AA 183 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HH
Confidence 444455444 35999999999999999999988 89999999866 8888664321 1 1122333 33
Q ss_pred H---HhCCCcEEEEEcCccccch-hHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCC
Q 009256 94 I---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169 (539)
Q Consensus 94 i---~~~~~p~iaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~ 169 (539)
+ ...++|+|++|+|.|+||| +.++++||++||.++|+|++. |...+++.+|.. ++++..
T Consensus 184 l~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~ 246 (304)
T 2f9y_B 184 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQ 246 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTT
T ss_pred HHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccC
Confidence 4 4559999999999999999 788999999999999999987 345566767753 578999
Q ss_pred CHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcC
Q 009256 170 TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (539)
Q Consensus 170 ~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (539)
+|++++++|+||.|++++++.+.+.+++..++..|
T Consensus 247 ~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 247 RSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp BHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999998754
No 113
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.60 E-value=8e-15 Score=149.30 Aligned_cols=188 Identities=11% Similarity=0.054 Sum_probs=133.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
.++|+|||+|.||.+||..|+++|++|++||+++++++.+.+ . .+...+++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~-------------g~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------E-------------GIAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------T-------------TCBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------C-------------CCEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776532 1 23344455 5566
Q ss_pred Cc---CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhcc-CCCCcEEEeccCCCCC---CCCeee
Q 009256 387 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT-SSQDRIIGAHFFSPAH---VMPLLE 457 (539)
Q Consensus 387 ~a---DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~-~~~~r~vg~h~~~p~~---~~~~ve 457 (539)
++ |+||+|+|.+ ....++.++.+.++++++|++.+++.+.. .+...+ ....+++......++. .++ .-
T Consensus 78 ~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~i 154 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CL 154 (358)
T ss_dssp HSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EE
T ss_pred cCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-ee
Confidence 67 9999999977 45677788999999999998877766543 333333 2233455543332221 122 22
Q ss_pred eecCCCCcHHHHHHHHHHHHHcC--------------------ceeEEEcC-cccchh----hcchH---HHHHHHHHHH
Q 009256 458 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV----NRAFF---PYSQSARLLV 509 (539)
Q Consensus 458 i~~~~~t~~e~~~~~~~l~~~lg--------------------~~~v~v~~-~~g~v~----nrl~~---~~~~Ea~~l~ 509 (539)
++.+ +++++++++++++.+| +.++++++ ..|.++ |-++. ..+.|++.++
T Consensus 155 m~GG---~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 155 MIGG---EKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEES---CHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecC---CHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 7899999999999999 57888875 344433 33332 4456999999
Q ss_pred Hc-------------------------CCCHHHHHHHH-HhC
Q 009256 510 SL-------------------------GVDVFRIDSAI-RSF 525 (539)
Q Consensus 510 ~~-------------------------G~~~~~id~a~-~~~ 525 (539)
++ |+++++|-++| .+.
T Consensus 232 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~ 273 (358)
T 4e21_A 232 HHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGS 273 (358)
T ss_dssp HTTTCC--------------CGGGCCCCCCHHHHHHHHTTTS
T ss_pred HhcccccccccccccccccccchhcccCCCHHHHHHHHhCcc
Confidence 87 57999999998 444
No 114
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.60 E-value=1.3e-15 Score=150.25 Aligned_cols=194 Identities=10% Similarity=0.001 Sum_probs=124.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
+||+|||+|.||.+++..|+++ ++| .+||+++++.+.+.+.+ +. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~----------------------g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVY----------------------GG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT----------------------CC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHc----------------------CC--ccCCHHHHHh
Confidence 4799999999999999999988 999 59999998877653311 11 34455 5578
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEecc----CCCCCC-CCeeeeecC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAHV-MPLLEIVRT 461 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~----~~p~~~-~~~vei~~~ 461 (539)
+||+||+|+|++. ...++.++. .++++|++.+++.+.+.+... .+.+.|+ .+++.. ....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999765 456666554 577788876667777655432 3445563 332321 112222111
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCc--cc-----chhhcchHHHHHHHHHHHHc-CCCHH----------HHHHHH-
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TG-----FAVNRAFFPYSQSARLLVSL-GVDVF----------RIDSAI- 522 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~--~g-----~v~nrl~~~~~~Ea~~l~~~-G~~~~----------~id~a~- 522 (539)
..++++.++.++++++.+|+.++++++. +. .+++.++..++.|+..++.. |++.+ .++.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~~ 207 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIKK 207 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHh
Confidence 2235677999999999999999998742 11 23444667778898888875 99554 455555
Q ss_pred Hh-CCCCcchhhcccc
Q 009256 523 RS-FGLPIGPFQEGGC 537 (539)
Q Consensus 523 ~~-~g~~~Gpf~~~d~ 537 (539)
.+ .+.++||++..|.
T Consensus 208 ~gp~~~~tgP~~r~D~ 223 (276)
T 2i76_A 208 MRVECSLTGPVKRGDW 223 (276)
T ss_dssp SCGGGGCCSHHHHTCH
T ss_pred cChHhhCCCCcccCCH
Confidence 33 5568899988884
No 115
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=153.66 Aligned_cols=188 Identities=15% Similarity=0.131 Sum_probs=134.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
+++|+|||+|.||..+|..|++.|++|++||+++++++.+.+ .| +....+. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 85 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVVS 85 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHHh
Confidence 468999999999999999999999999999999987766422 11 2223344 5578
Q ss_pred CcCEEEEcccCChhHHHHHHH--HHHHhCCCCeEEEecCCCCC--hHHHhhccC-CCCcEEEeccCCCC---CCCCeeee
Q 009256 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLLEI 458 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~--~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~-~~~r~vg~h~~~p~---~~~~~vei 458 (539)
++|+||+|+|++..++..+.. .+.+.+.++++|++.+++.+ ...+...+. .+.++++.++++.+ ..+.++.+
T Consensus 86 ~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~ 165 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVIL 165 (316)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEE
T ss_pred cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEE
Confidence 899999999976665544332 13466788888876554432 234444442 35578877665433 23455666
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCceeEEEcCc-c----cchhhcc---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNC-T----GFAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~-~----g~v~nrl---~~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+++ +++.++.+.++++.+|..++++++. . .++.|.+ ...++.|++.+++. |++++++++++
T Consensus 166 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 166 AAG---DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eCC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 666 5789999999999999999888762 1 1355665 35677899999876 99999999988
No 116
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.59 E-value=2.1e-14 Score=140.44 Aligned_cols=182 Identities=12% Similarity=0.084 Sum_probs=129.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 310 KVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
||+|||+|.||.+++..|+++| ++|++||+++++++.+.+.. .+...++. +.+ +
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~~~~-~ 57 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-----------------------GVETSATLPELH-S 57 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-----------------------CCEEESSCCCCC-T
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc-----------------------CCEEeCCHHHHh-c
Confidence 7999999999999999999999 99999999998877653310 13334445 667 9
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCC-eeeeecCCCCcH
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTSA 466 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~-~vei~~~~~t~~ 466 (539)
||+||+|+| ......++.++.+ + +++|++.++++++..+...+....+++...+..|..... ...++.+..+++
T Consensus 58 ~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~ 132 (263)
T 1yqg_A 58 DDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSE 132 (263)
T ss_dssp TSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCH
T ss_pred CCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCH
Confidence 999999999 4445566665544 4 888888888988888877776655788885554554443 445667777899
Q ss_pred HHHHHHHHHHHHcCceeEEEc-Cc--------ccchhhcchHHHHHHHHH-HHHcCCCHHHHHHHH
Q 009256 467 QVILDLMTVGKIIKKVPVVVG-NC--------TGFAVNRAFFPYSQSARL-LVSLGVDVFRIDSAI 522 (539)
Q Consensus 467 e~~~~~~~l~~~lg~~~v~v~-~~--------~g~v~nrl~~~~~~Ea~~-l~~~G~~~~~id~a~ 522 (539)
+.++.++++++.+|..+ +++ +. .| ..+.+++.++..... ..+.|++++++.+.+
T Consensus 133 ~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g-~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~ 196 (263)
T 1yqg_A 133 TDRRIADRIMKSVGLTV-WLDDEEKMHGITGISG-SGPAYVFYLLDALQNAAIRQGFDMAEARALS 196 (263)
T ss_dssp HHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTT-SHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHc-cHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999876 666 41 11 112223333322222 335599888877765
No 117
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.58 E-value=2.4e-15 Score=142.11 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++.++.+++.+.|..++.+++++.|+|.- .|.|+++.. ...++ +.|..+++||++.++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 488999999999999999887788888863 344544321 22455 678899999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCCCcchh------------------hccccccCH--HHHHHHHH
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVGL--SKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~------------------~~l~r~vG~--~~a~~l~l 164 (539)
|.|.++|+.|+++||. |+|.++++|++++.. |..|..|.. ..+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 444433432 456777776 58889999
Q ss_pred cCCCCCHHHHHHcCCcceecCcch
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSEE 188 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~ 188 (539)
+|+.++|+||+++||||+|+++++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998775
No 118
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.58 E-value=2.4e-14 Score=149.50 Aligned_cols=199 Identities=17% Similarity=0.159 Sum_probs=133.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH----HHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE----ANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
+|+|||+|.||.++|.+|+++||+|++||+++++++.+.+... ..+..+++. ....+++++++++ ++
T Consensus 10 ~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~--------~~~~g~l~~ttd~~ea 81 (446)
T 4a7p_A 10 RIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVAS--------NVKAGRLSFTTDLAEG 81 (446)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHH--------HHHTTCEEEESCHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHh--------hcccCCEEEECCHHHH
Confidence 7999999999999999999999999999999999888744210 000000100 0012467888888 78
Q ss_pred CCCcCEEEEcccCChh---------HHHHHHHHHHHhCCCCeEEEecCCCCChHH---Hhhcc----CCCCcEEEeccCC
Q 009256 385 FKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKT----SSQDRIIGAHFFS 448 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~---------~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~---i~~~~----~~~~r~vg~h~~~ 448 (539)
+++||+||+|||.... ..+.+++.+.++++++++|+..| ++++.+ +...+ ....-.+.. +
T Consensus 82 ~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~~d~~v~~---~ 157 (446)
T 4a7p_A 82 VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPNSGAKVVS---N 157 (446)
T ss_dssp HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTTSCCEEEE---C
T ss_pred HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCCCCceEEe---C
Confidence 9999999999987653 46777889999999999887654 555432 22211 111111221 2
Q ss_pred CCCC--CCe--------eeeecCCCCcHHHHHHHHHHHHHcCce---eEEEcCcc-----cchhhcch---HHHHHHHHH
Q 009256 449 PAHV--MPL--------LEIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRAF---FPYSQSARL 507 (539)
Q Consensus 449 p~~~--~~~--------vei~~~~~t~~e~~~~~~~l~~~lg~~---~v~v~~~~-----g~v~nrl~---~~~~~Ea~~ 507 (539)
|... +.. ..++++ .++++.+.++++++.+++. ++++++.. +++.|-++ .+++||+..
T Consensus 158 Pe~a~eG~a~~d~~~p~~ivvG~--~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 235 (446)
T 4a7p_A 158 PEFLREGAAIEDFKRPDRVVVGT--EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIAD 235 (446)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEC--SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCCCEEEEeC--CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 111 113333 2589999999999999875 57776532 34445443 367889999
Q ss_pred HHHc-CCCHHHHHHHH
Q 009256 508 LVSL-GVDVFRIDSAI 522 (539)
Q Consensus 508 l~~~-G~~~~~id~a~ 522 (539)
+++. |++++++-+++
T Consensus 236 l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 236 LCEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHH
Confidence 9987 99999999998
No 119
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.58 E-value=1.6e-14 Score=149.80 Aligned_cols=197 Identities=14% Similarity=0.089 Sum_probs=130.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH----HHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (539)
.|+.|||+|.||.++|.+|+++||+|++||+++++++.+.+.. +..++++++. .-..+++.++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~--------~~~~g~l~~ttd--- 80 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEE--------VLSSGKLKVSTT--- 80 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHH--------HHHTTCEEEESS---
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHh--------hcccCceEEeCc---
Confidence 4899999999999999999999999999999999998875421 0001111100 001245677766
Q ss_pred CCCcCEEEEcccCChh----------HHHHHHHHHHHhCCCCeEEEecCCCCChHH---Hhhcc-C-CC----Cc-EEEe
Q 009256 385 FKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKT-S-SQ----DR-IIGA 444 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~----------~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~---i~~~~-~-~~----~r-~vg~ 444 (539)
+++||+||.|||.+.. ......+.+.++++++++|+.. |++++.. +...+ . .. .. .+.
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~-STV~pgtt~~v~~~i~e~~g~~~~~d~~v~- 158 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVE-STIAPKTMDDFVKPVIENLGFTIGEDIYLV- 158 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEEC-SCCCTTHHHHTHHHHHHTTTCCBTTTEEEE-
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEe-cCCChhHHHHHHHHHHHHcCCCcCCCeEEE-
Confidence 4589999999997652 3455667899999999988754 4555442 22211 1 11 11 111
Q ss_pred ccCCCCCCCCe---------eeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCc-----ccchhhcchH---HHHHHHHH
Q 009256 445 HFFSPAHVMPL---------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-----TGFAVNRAFF---PYSQSARL 507 (539)
Q Consensus 445 h~~~p~~~~~~---------vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~-----~g~v~nrl~~---~~~~Ea~~ 507 (539)
++|....+. ..++.|. ++++.+.++++++.+++.++++++. ..++.|-++. +++||+..
T Consensus 159 --~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~ 234 (431)
T 3ojo_A 159 --HCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTK 234 (431)
T ss_dssp --ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --ECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123221111 0234442 6899999999999999888887542 1234454433 77899999
Q ss_pred HHHc-CCCHHHHHHHH
Q 009256 508 LVSL-GVDVFRIDSAI 522 (539)
Q Consensus 508 l~~~-G~~~~~id~a~ 522 (539)
+++. |+++.++-+++
T Consensus 235 l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 235 ICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHH
Confidence 9987 99999999998
No 120
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.58 E-value=9e-15 Score=151.44 Aligned_cols=195 Identities=15% Similarity=0.196 Sum_probs=131.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH----HHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
.++||+|||+|.||.++|..|++ |++|++||+++++++.+.+.. +..+..++..+ ..++++++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~----------~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK----------PLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS----------CCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc----------cCCeEEEcCH
Confidence 45699999999999999999998 999999999999988875421 11111222111 1357788887
Q ss_pred -cCCCCcCEEEEcccCCh---------hHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhhccCCCCcEEEeccCCC
Q 009256 383 -SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSP 449 (539)
Q Consensus 383 -~~~~~aDlVi~avpe~~---------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~~~~~~~r~vg~h~~~p 449 (539)
+++++||+||+|+|++. .....+.+.+.+ ++++++|+. .|++++. ++...+.. ..+. | +|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~~v~--~-sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--DNVI--F-SP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--CCEE--E-CC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--ccEe--e-cC
Confidence 78899999999999864 245667788888 888888875 4455543 34443332 2222 1 33
Q ss_pred CCCCCe----------eeeecCCCCcHHHHHHHHHHHHH--cCc-eeEEEcC-----cccchhhcch---HHHHHHHHHH
Q 009256 450 AHVMPL----------LEIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGN-----CTGFAVNRAF---FPYSQSARLL 508 (539)
Q Consensus 450 ~~~~~~----------vei~~~~~t~~e~~~~~~~l~~~--lg~-~~v~v~~-----~~g~v~nrl~---~~~~~Ea~~l 508 (539)
....+. ..++++ +++..+.+.+++.. ++. .++++.+ ...++.|-++ .+++||+..+
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~---~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~l 253 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGE---RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSY 253 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESS---CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecC---CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211 124444 45677889999987 553 3555543 2234556543 3678999999
Q ss_pred HHc-CCCHHHHHHHH
Q 009256 509 VSL-GVDVFRIDSAI 522 (539)
Q Consensus 509 ~~~-G~~~~~id~a~ 522 (539)
++. |+++.++-+++
T Consensus 254 ae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 254 AESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 987 99999999998
No 121
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=5.5e-15 Score=149.15 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=115.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.++||+|||+|.||.+||..|.++|++|++||++++.++.+.+ .| +..+++. +.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHH
Confidence 3568999999999999999999999999999999988776532 12 1223333 333
Q ss_pred ----CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhccCCCCcEEEeccCCCCC-C------
Q 009256 386 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-V------ 452 (539)
Q Consensus 386 ----~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~~~r~vg~h~~~p~~-~------ 452 (539)
.+||+||+|+| +.....+++++.++ +++++|++.+|... ...+..... ..+|++.||+..+. .
T Consensus 63 ~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 35799999999 45677888888887 78888876555432 234544443 46899999977653 1
Q ss_pred -----CCeeeeecCCCCcHH--------HHHHHHHHHHHcCceeEEEc
Q 009256 453 -----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG 487 (539)
Q Consensus 453 -----~~~vei~~~~~t~~e--------~~~~~~~l~~~lg~~~v~v~ 487 (539)
+..+.+++++.++++ .++.++++++.+|..+++++
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSR 186 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeC
Confidence 234667888888888 99999999999999999885
No 122
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.57 E-value=8e-15 Score=146.41 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=131.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
+||+|||+|.||..++..|++.|++|++||+++++.+.+.+ .| +...+++ +.+.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAAA 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 58999999999999999999999999999999988766522 11 2334444 55778
Q ss_pred cCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCC--hHHHhhccCC-CCcEEEeccCCCCC----CCCeeee
Q 009256 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLEI 458 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~-~~r~vg~h~~~p~~----~~~~vei 458 (539)
+|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ...+...+.. ..+++.. |..+.. .+.+..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~ 139 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTIM 139 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEE
Confidence 9999999997666655444 268888899999988777763 3355444332 2344432 211110 1223344
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCceeEEEcC-cccc----hhhcc---hHHHHHHHHHHHHc-CCCHHHHHHHHH
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF----AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAIR 523 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g~----v~nrl---~~~~~~Ea~~l~~~-G~~~~~id~a~~ 523 (539)
+++ +++.++.++++++.+|..++++++ ..|. +.|.+ +...+.|++.+++. |++++++++++.
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 210 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIG 210 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 454 789999999999999999888864 3333 34555 33567899988876 999999998883
No 123
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.55 E-value=7.7e-14 Score=146.50 Aligned_cols=200 Identities=15% Similarity=0.146 Sum_probs=134.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH----HHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE----ANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+... ..+...++. ....+++++++++ +
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~--------~~~~~~l~~t~d~~e 74 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIAR--------NVKAGRLRFGTEIEQ 74 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHH--------HHHTTSEEEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHh--------hcccCcEEEECCHHH
Confidence 48999999999999999999999999999999999887654210 000000000 0012457778888 5
Q ss_pred CCCCcCEEEEcccCChh--------HHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhhccCC-------CCc-EEEe
Q 009256 384 EFKDVDMVIEAVIESVP--------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-------QDR-IIGA 444 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~--------~~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~~~~~-------~~r-~vg~ 444 (539)
++++||+||+|+|.+.. ....+++++.++++++++|++.+ ++++. .+...+.. ... .+..
T Consensus 75 a~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~ 153 (450)
T 3gg2_A 75 AVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIAS 153 (450)
T ss_dssp HGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEe
Confidence 68999999999987642 67788899999999999887655 44433 22221110 011 1121
Q ss_pred ccCCCCCCCC--ee--------eeecCCCCcHHHHHHHHHHHHHcCc--eeEEEcCcc-----cchhhcch---HHHHHH
Q 009256 445 HFFSPAHVMP--LL--------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCT-----GFAVNRAF---FPYSQS 504 (539)
Q Consensus 445 h~~~p~~~~~--~v--------ei~~~~~t~~e~~~~~~~l~~~lg~--~~v~v~~~~-----g~v~nrl~---~~~~~E 504 (539)
+|....+ .+ .++++ .++++.+.++++++.+++ .++++.+.. +++.|.+. .+++||
T Consensus 154 ---~Pe~a~eG~~~~~~~~p~~ivvG~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE 228 (450)
T 3gg2_A 154 ---NPEFLKEGNAIDDFMKPDRVVVGV--DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMND 228 (450)
T ss_dssp ---CCCCCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---chhhhcccchhhhccCCCEEEEEc--CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221 11 13333 268999999999999987 366665532 34556543 367889
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 009256 505 ARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 505 a~~l~~~-G~~~~~id~a~ 522 (539)
+..+++. |++++++.+++
T Consensus 229 ~~~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 229 VANLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 9999988 99999999999
No 124
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.55 E-value=1.9e-14 Score=143.47 Aligned_cols=187 Identities=18% Similarity=0.194 Sum_probs=129.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
+||+|||+|.||..++..|.+.|++|++||+++++.+.+.+ .| +...+++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988776532 11 2334455 55788
Q ss_pred cCEEEEcccCChhHHHHHH--HHHHHhCCCCeEEEecCCCCCh--HHHhhccCC-CCcEEEeccCC-CC--CCCCeeeee
Q 009256 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS-PA--HVMPLLEIV 459 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~--~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~-~~r~vg~h~~~-p~--~~~~~vei~ 459 (539)
+|+||+|+|++..++..++ +++.+.++++++|++.+++.+. ..+...+.. ...++..+.+. ++ ....+..++
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999997666554443 5677888999988877666543 345444432 22333321111 11 011223333
Q ss_pred cCCCCcHHHHHHHHHHHHHcCceeEEEcC-cccch---hhcchH----HHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g~v---~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
++ +++.++.++++++.+|..++++++ ..|.. +|+.+. ..++|++.+++. |+++++++.++
T Consensus 142 ~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 142 GG---DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp ES---CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 44 789999999999999999988864 34433 233333 567799988866 99999999888
No 125
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.55 E-value=3.2e-15 Score=148.89 Aligned_cols=182 Identities=18% Similarity=0.127 Sum_probs=124.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCCc
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (539)
||+|||+|.||.+++..|++.|++|++||+++++++.+.+ . .+..+++. +.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~~ 57 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------A-------------GEQVVSSPADVAEKA 57 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------T-------------TCEECSSHHHHHHHC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------c-------------CCeecCCHHHHHhcC
Confidence 7999999999999999999999999999999988776522 1 13334455 557889
Q ss_pred CEEEEcccCChhHHHHHHHH---HHHhCCCCeEEEecCCCCChHHHhh---ccCCCCcEEEeccCCCCCCC-------Ce
Q 009256 389 DMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVM-------PL 455 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~---l~~~~~~~~ii~s~ts~~~~~~i~~---~~~~~~r~vg~h~~~p~~~~-------~~ 455 (539)
|+||+|+|.+..++. ++.+ +.+.++++++|++ ++++.+..... .+.. + +.+|.+.|... ..
T Consensus 58 Dvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~--~--g~~~~~~p~~~g~~~a~~~~ 131 (296)
T 2gf2_A 58 DRIITMLPTSINAIE-AYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEK--M--GAVFMDAPVSGGVGAARSGN 131 (296)
T ss_dssp SEEEECCSSHHHHHH-HHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHH--T--TCEEEECCEESHHHHHHHTC
T ss_pred CEEEEeCCCHHHHHH-HHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHH--c--CCEEEEcCCCCChhHHhcCc
Confidence 999999986665544 4443 3456788888888 77777764432 2211 1 12222222111 11
Q ss_pred eeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC-cccc---hhhcchH----HHHHHHHHHHHc-CCCHHHHHHHHH
Q 009256 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAIR 523 (539)
Q Consensus 456 vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g~---v~nrl~~----~~~~Ea~~l~~~-G~~~~~id~a~~ 523 (539)
..++.+ .+++.++.++++++.+|..++++++ ..|. ++|+.+. ..++|++.+++. |++++++++++.
T Consensus 132 ~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~ 206 (296)
T 2gf2_A 132 LTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILN 206 (296)
T ss_dssp EEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 223333 3688899999999999999888865 2222 2344442 577899998876 999999999883
No 126
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.55 E-value=2.3e-14 Score=151.74 Aligned_cols=204 Identities=15% Similarity=0.169 Sum_probs=136.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHh-----hcccccC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-----KMLKGVL 380 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~ 380 (539)
|+||+|||+|.||.++|..|+++ |++|++||+++++++.+.+.. ..+......... .++.+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~----------~~i~e~~l~~~~~~~~~~~~~~t~ 74 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPT----------LPIYEPGLKEVVESCRGKNLFFST 74 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS----------CSSCCTTHHHHHHHHBTTTEEEES
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCC----------CCcCCCCHHHHHHHhhcCCEEEEC
Confidence 46899999999999999999998 899999999999887753210 000000000000 2466667
Q ss_pred Cc-cCCCCcCEEEEcccCChhH-------------HHHHHHHHHHhCCCCeEEEecCCCCChH---HHhhccCCC-CcEE
Q 009256 381 DY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQ-DRII 442 (539)
Q Consensus 381 ~~-~~~~~aDlVi~avpe~~~~-------------~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~~~~~~-~r~v 442 (539)
++ +++++||+||+|+|+.... ...+.+++.++++++++|+..+ +.++. .+...+... ...+
T Consensus 75 ~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~g~~~~l~~~l~~~~~~~~ 153 (467)
T 2q3e_A 75 NIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS-TVPVRAAESIRRIFDANTKPNL 153 (467)
T ss_dssp CHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS-CCCTTHHHHHHHHHHHTCCTTC
T ss_pred CHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC-cCCchHHHHHHHHHHHhCCCCC
Confidence 76 5788999999999865532 4567788888899998886543 33332 233222111 0011
Q ss_pred Eec-cCCCCCCCCee----------eeecCCC--CcHHHHHHHHHHHHHc-CceeEEEcC-----cccchhhcch---HH
Q 009256 443 GAH-FFSPAHVMPLL----------EIVRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRAF---FP 500 (539)
Q Consensus 443 g~h-~~~p~~~~~~v----------ei~~~~~--t~~e~~~~~~~l~~~l-g~~~v~v~~-----~~g~v~nrl~---~~ 500 (539)
..+ .++|....+.. .+++++. ++++..+.++++++.+ |..++++++ ..+++.|.++ .+
T Consensus 154 d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia 233 (467)
T 2q3e_A 154 NLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRIS 233 (467)
T ss_dssp EEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHH
Confidence 111 23444333322 2344433 3789999999999999 778888764 3457778763 47
Q ss_pred HHHHHHHHHHc-CCCHHHHHHHH
Q 009256 501 YSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 501 ~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+++|+..+++. |++++++.+++
T Consensus 234 ~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 234 SINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHH
Confidence 88999999988 99999999999
No 127
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.55 E-value=2.9e-14 Score=141.61 Aligned_cols=158 Identities=15% Similarity=0.099 Sum_probs=118.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.++||+|||+|.||.+++..|.++ |++|++||+++++.+.+.+ .|..+ ..++++ +
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-----------~g~~~-----------~~~~~~~~ 62 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE-----------RGIVD-----------EATADFKV 62 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-----------TTSCS-----------EEESCTTT
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH-----------cCCcc-----------cccCCHHH
Confidence 357899999999999999999987 6899999999988766522 12110 223455 5
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHh-CCCCeEEEecCCCCC--hHHHhhccCC-CCcEEEeccC------CCCC--
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH-- 451 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~-~~~~~ii~s~ts~~~--~~~i~~~~~~-~~r~vg~h~~------~p~~-- 451 (539)
.+++||+||+|+|.+. ...+++++.++ ++++++|++.+++.. ...+...+.. ..++++.||+ .|..
T Consensus 63 ~~~~aDvVilavp~~~--~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~ 140 (290)
T 3b1f_A 63 FAALADVIILAVPIKK--TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAAN 140 (290)
T ss_dssp TGGGCSEEEECSCHHH--HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCC
T ss_pred hhcCCCEEEEcCCHHH--HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhh
Confidence 6789999999999544 47888889888 888988875544322 2455555554 6689999987 4432
Q ss_pred ----CCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 452 ----~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
.+..+.++++..++++.++.++++++.+|..++++.+
T Consensus 141 ~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 141 VNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp TTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred HHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3355777887778999999999999999999888764
No 128
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.54 E-value=5.4e-14 Score=137.24 Aligned_cols=185 Identities=11% Similarity=0.093 Sum_probs=130.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++||+|||+|.||..++..|.+.|++|.+||+++++.+.+.+.. .+...+++ +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL-----------------------ALPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH-----------------------TCCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc-----------------------CCEeeCCHHHHHh
Confidence 35899999999999999999999999999999998877654321 12334445 5577
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCC-eeeeecCCCCc
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~-~vei~~~~~t~ 465 (539)
++|+||+|+|. .....++.+ +.+++++++.+++++...+...+....+++..++..|..... ...++++..++
T Consensus 60 ~~D~Vi~~v~~--~~~~~v~~~----l~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIKP--QLFETVLKP----LHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSCG--GGHHHHHTT----SCCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeCc--HhHHHHHHH----hccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 99999999993 334444443 347778888888888888877766555788877776665554 45566777789
Q ss_pred HHHHHHHHHHHHHcCceeEEEcCcc-c-c-----hhhcchHHHHHHHH-HHHHcCCCHHHHHHHH
Q 009256 466 AQVILDLMTVGKIIKKVPVVVGNCT-G-F-----AVNRAFFPYSQSAR-LLVSLGVDVFRIDSAI 522 (539)
Q Consensus 466 ~e~~~~~~~l~~~lg~~~v~v~~~~-g-~-----v~nrl~~~~~~Ea~-~l~~~G~~~~~id~a~ 522 (539)
++.++.++++++.+| .++++++.. . + -.|.+++.+..... .....|++++++-+++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 577776421 0 0 11233333332222 2445699988877666
No 129
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.54 E-value=1.5e-13 Score=137.90 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=131.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc---cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY---SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~ 384 (539)
++||+|||+|.||..+|..|+++|++|++||+++++++.+.+.- ....... . .....+..+++. +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g-------~~~~~~~-~---~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNG-------LIADFNG-E---EVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHC-------EEEEETT-E---EEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCC-------EEEEeCC-C---eeEecceeecchhhccc
Confidence 45899999999999999999999999999999998877654320 0000000 0 000112222222 23
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhccCCCCcEE-EeccCCCCCCCC--------
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVMP-------- 454 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~~~~~r~v-g~h~~~p~~~~~-------- 454 (539)
++++|+||+|+|.+ ....+++++.++++++++|++.++++.. ..+++.+.. .+++ |.++...+..++
T Consensus 72 ~~~~d~vi~~v~~~--~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~-~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTKAQ--QLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPK-ENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSCHH--HHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCG-GGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEeccc--cHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCC-ccEEEEEeeeeeEEcCCCEEEEecC
Confidence 45999999999954 4678888999999999999888888776 456555543 3666 444433222221
Q ss_pred -eeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcc-----cchhh------------------------cchHHHHHH
Q 009256 455 -LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN------------------------RAFFPYSQS 504 (539)
Q Consensus 455 -~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~-----g~v~n------------------------rl~~~~~~E 504 (539)
.+.+.....++++..+.+.++++.+|..+++.++.. +++.| .++...+.|
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E 228 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISE 228 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHH
Confidence 122333345678999999999999999887776631 12222 233456679
Q ss_pred HHHHHHc-CCCH--HHHHHHH
Q 009256 505 ARLLVSL-GVDV--FRIDSAI 522 (539)
Q Consensus 505 a~~l~~~-G~~~--~~id~a~ 522 (539)
++.+++. |+++ +.+.+.+
T Consensus 229 ~~~la~~~G~~~~~~~~~~~~ 249 (316)
T 2ew2_A 229 FAAVAEKEAIYLDQAEVYTHI 249 (316)
T ss_dssp HHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCCChHHHHHHH
Confidence 9998876 9854 5665655
No 130
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.53 E-value=9.8e-15 Score=145.29 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=127.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++||+|||+|.||..++..|++.|++|++|| ++++.+.+.+ .| +...++. +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 3589999999999999999999999999999 9877665422 11 2334445 5578
Q ss_pred CcCEEEEcccCChhHHHHHHH--HHHHhCCCCeEEEecCCCCCh--HHHhhccCCCCcEEEeccCCCCC--------CCC
Q 009256 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFSPAH--------VMP 454 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~--~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~~~r~vg~h~~~p~~--------~~~ 454 (539)
++|+||+|+|.+..++..+.. ++.+.++++++|++.+++.+. ..+...+... +.||++.|. .+.
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g~ 133 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREGT 133 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHTC
T ss_pred cCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcCC
Confidence 999999999976655443332 666778889988876666432 3454444321 233333332 123
Q ss_pred eeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC-ccc----chhhcc---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 455 ~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-~~g----~v~nrl---~~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+..++++ +++.++.++++++.+|..++++++ ..+ ++.|.+ +...++|++.++++ |++++++...+
T Consensus 134 ~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 134 LSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp EEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3445555 789999999999999999888865 333 334543 23567899998876 99999999888
No 131
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.52 E-value=1.2e-13 Score=140.79 Aligned_cols=200 Identities=13% Similarity=0.046 Sum_probs=132.6
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 009256 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (539)
Q Consensus 304 ~~~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 382 (539)
|.+.++||+|||+|.||.++|..|+++|++|++||++++.++.+.+...+ ..+...-.+ ..++.+++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~--~~~l~g~~l--------~~~i~~t~d~~ 94 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN--NRYLPNYPF--------PETLKAYCDLK 94 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSB--TTTBTTCCC--------CTTEEEESCHH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC--cccCCCCcc--------CCCeEEECCHH
Confidence 33345689999999999999999999999999999999988776442100 000000001 1345667777
Q ss_pred cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH------HHhhccCCCCcEE-EeccCCCC---CC
Q 009256 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRII-GAHFFSPA---HV 452 (539)
Q Consensus 383 ~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~------~i~~~~~~~~r~v-g~h~~~p~---~~ 452 (539)
+++++||+||+++|. ...+.+++++.++++++++|++.++++... .+.+.++. ..+. -.-|.... ..
T Consensus 95 ea~~~aDvVilaVp~--~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vlsgP~~a~ev~~g 171 (356)
T 3k96_A 95 ASLEGVTDILIVVPS--FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVISGPSLATEVAAN 171 (356)
T ss_dssp HHHTTCCEEEECCCH--HHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEEESSCCHHHHHTT
T ss_pred HHHhcCCEEEECCCH--HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEEECccHHHHHHcC
Confidence 678999999999994 468889999999999999999888887764 23343431 1211 11111100 01
Q ss_pred CCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc----------------------chhhc---chHHHHHHHHH
Q 009256 453 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVNR---AFFPYSQSARL 507 (539)
Q Consensus 453 ~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g----------------------~v~nr---l~~~~~~Ea~~ 507 (539)
.+...++.+ .+++..+.++++|...+..+++..|..| +-.|. ++...++|+.+
T Consensus 172 ~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~ 249 (356)
T 3k96_A 172 LPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGR 249 (356)
T ss_dssp CCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHH
Confidence 112122222 3788999999999999999888877443 22232 23345669999
Q ss_pred HHHc-CCCHHHH
Q 009256 508 LVSL-GVDVFRI 518 (539)
Q Consensus 508 l~~~-G~~~~~i 518 (539)
+++. |++++.+
T Consensus 250 l~~a~G~~~~t~ 261 (356)
T 3k96_A 250 LVSVFGGKQETL 261 (356)
T ss_dssp HHHHTTCCHHHH
T ss_pred HHHHhCCChHhh
Confidence 9977 9988864
No 132
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.52 E-value=1.2e-13 Score=146.55 Aligned_cols=203 Identities=12% Similarity=0.131 Sum_probs=134.2
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHH-----hhcccc
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA-----LKMLKG 378 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~i~~ 378 (539)
+.++||+|||+|.||.++|.+|+++ |++|++||+++++++.+.+.. ..+........ ..++.+
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~----------~~i~e~gl~~~~~~~~~~~l~~ 76 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK----------LPIYEPGLDEIVFAARGRNLFF 76 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS----------CSSCCTTHHHHHHHHBTTTEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC----------CCcCCCCHHHHHHHhhcCCEEE
Confidence 3457999999999999999999998 799999999999988764210 00000000000 124667
Q ss_pred cCCc-cCCCCcCEEEEcccCChh-------------HHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhhccCC--C-
Q 009256 379 VLDY-SEFKDVDMVIEAVIESVP-------------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS--Q- 438 (539)
Q Consensus 379 ~~~~-~~~~~aDlVi~avpe~~~-------------~~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~~~~~--~- 438 (539)
++++ +++++||+||+|+|+... ....+++.+.++++++++|+..| ++++. .+...+.. .
T Consensus 77 t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~ 155 (481)
T 2o3j_A 77 SSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKN 155 (481)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC-
T ss_pred ECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCc
Confidence 7776 778999999999986432 46677888999999999887543 44432 22222211 1
Q ss_pred ---Cc-EEEeccCCCCCCCCee---------ee-ecCCCC--cHHHHHHHHHHHHHcCc-eeEEEcC-----cccchhhc
Q 009256 439 ---DR-IIGAHFFSPAHVMPLL---------EI-VRTERT--SAQVILDLMTVGKIIKK-VPVVVGN-----CTGFAVNR 496 (539)
Q Consensus 439 ---~r-~vg~h~~~p~~~~~~v---------ei-~~~~~t--~~e~~~~~~~l~~~lg~-~~v~v~~-----~~g~v~nr 496 (539)
.. .+..+| ....+.. .+ +++... ++++++.++++++.++. .++++.+ ...++.|.
T Consensus 156 ~~~~d~~v~~~P---e~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~ 232 (481)
T 2o3j_A 156 NENLKFQVLSNP---EFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANA 232 (481)
T ss_dssp ---CCEEEEECC---CCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHH
T ss_pred CcCCceEEEeCc---ccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHH
Confidence 11 233333 2211111 23 344322 24788999999999996 7777754 33456676
Q ss_pred c---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 497 A---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 497 l---~~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+ ..++++|+..+++. |++++++.+++
T Consensus 233 ~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 233 FLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 4 45788999999988 99999999998
No 133
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.51 E-value=2.5e-13 Score=134.21 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=114.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
|++|+|||+|.||.+++..|.+.|+ +|++||+++++++.+.+ .|... ..++++ +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-----------~g~~~-----------~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-----------LGIID-----------EGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-----------TTSCS-----------EEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-----------CCCcc-----------cccCCHHHH
Confidence 4689999999999999999999999 99999999988766421 12110 123445 66
Q ss_pred CC-CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhccCCCCcEEEeccCCCCC----------
Q 009256 385 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 451 (539)
Q Consensus 385 ~~-~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~~~r~vg~h~~~p~~---------- 451 (539)
++ +||+||+|+|.+ ....++.++.++++++++|++.+++.. ...+.+.+.. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp~~--~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSPVR--TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSCHH--HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCCHH--HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 999999999954 455788888888999988776444332 2344444432 478878755321
Q ss_pred --CCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 452 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 452 --~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
.+..+.++++..++++.++.++++++.+|..++++++
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3445777887788999999999999999999888864
No 134
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.51 E-value=5e-14 Score=148.24 Aligned_cols=192 Identities=13% Similarity=0.041 Sum_probs=131.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC-
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE- 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~- 384 (539)
.+++|+|||+|.||.+||.+|+++||+|++||+++++++.+.+. +... ..+..+.++ +.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-----------g~~g--------~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-----------EAKG--------TKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-----------TTTT--------SSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-----------ccCC--------CceeccCCHHHHH
Confidence 35689999999999999999999999999999999988876431 1000 123333444 32
Q ss_pred --CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCee
Q 009256 385 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (539)
Q Consensus 385 --~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~v 456 (539)
++++|+||++||.+..+ +.+++++.++++++.+|++.+++.+.. .+...+. ...++++......+ ..++ .
T Consensus 64 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~ 141 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAV-DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-S 141 (484)
T ss_dssp HTBCSSCEEEECSCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-E
T ss_pred hhccCCCEEEEecCChHHH-HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-e
Confidence 34699999999976554 456788999999999998877776543 2222221 22345554322211 1122 2
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCcee-------EEEcC-cccc----hhhcchH---HHHHHHHHHHHc--CCCHHHHH
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTGF----AVNRAFF---PYSQSARLLVSL--GVDVFRID 519 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~-------v~v~~-~~g~----v~nrl~~---~~~~Ea~~l~~~--G~~~~~id 519 (539)
-++.+ ++++++.++++++.+|..+ +++++ ..|. +.|-+.+ ..++|++.+++. |++++++.
T Consensus 142 im~GG---~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 142 LMPGG---NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEE---CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eecCC---CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 23444 6899999999999999887 67765 2232 3354433 456799999976 89999988
Q ss_pred HHH
Q 009256 520 SAI 522 (539)
Q Consensus 520 ~a~ 522 (539)
+++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 135
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.51 E-value=6.3e-14 Score=148.36 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=132.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
-++|+|||+|.||.+||..|+++|++|++|||++++++.+.+... + ..+..++++ +.++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 74 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENP---------G-----------KKLVPYYTVKEFVE 74 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHST---------T-----------SCEEECSSHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCC---------C-----------CCeEEeCCHHHHHh
Confidence 457999999999999999999999999999999998887644210 0 124445555 4455
Q ss_pred C---cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCC---CCCCeee
Q 009256 387 D---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (539)
Q Consensus 387 ~---aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~---~~~~~ve 457 (539)
+ ||+||.+||.+..+ +.+++++.+.++++++|++.+++.+.. .+.+.+. ...+++++.....+ ..++ ..
T Consensus 75 ~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i 152 (480)
T 2zyd_A 75 SLETPRRILLMVKAGAGT-DAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-SI 152 (480)
T ss_dssp TBCSSCEEEECSCSSSHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EE
T ss_pred CCCCCCEEEEECCCHHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-eE
Confidence 4 99999999975554 466688999999999998877776543 3433332 23355555332222 1223 22
Q ss_pred eecCCCCcHHHHHHHHHHHHHcCce-------eEEEcC-ccc----chhhcch---HHHHHHHHHHHHc--CCCHHHHHH
Q 009256 458 IVRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDS 520 (539)
Q Consensus 458 i~~~~~t~~e~~~~~~~l~~~lg~~-------~v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~--G~~~~~id~ 520 (539)
++.+ +++.++.++++++.+|.. ++++++ ..| ++.|.+. ...+.|++.+.+. |++++++..
T Consensus 153 ~~gg---~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~ 229 (480)
T 2zyd_A 153 MPGG---QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQ 229 (480)
T ss_dssp EEES---CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred EecC---CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 3333 689999999999999987 566654 223 2346553 3566799999876 999999887
Q ss_pred HH
Q 009256 521 AI 522 (539)
Q Consensus 521 a~ 522 (539)
++
T Consensus 230 l~ 231 (480)
T 2zyd_A 230 TF 231 (480)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 136
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.1e-14 Score=151.15 Aligned_cols=190 Identities=13% Similarity=0.057 Sum_probs=132.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
.+|+|||+|.||.+||..|+++|++|++||+++++++.+.+.. .. + ..+..++++ +.+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~~-~-----------~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANE-------AK-G-----------KSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT-------TT-T-----------SSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc-------cc-C-----------CCeEEeCCHHHHHhc
Confidence 4799999999999999999999999999999999887764310 00 0 124445555 44444
Q ss_pred ---cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCCC---CCCeeee
Q 009256 388 ---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (539)
Q Consensus 388 ---aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~~---~~~~vei 458 (539)
||+||+|||.+..+. .+++++.+.++++.+|++.+++.+.. .+...+. ...+++++.....+. .++ ..+
T Consensus 72 l~~aDvVil~Vp~~~~v~-~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~-~im 149 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAPVD-ALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP-SLM 149 (497)
T ss_dssp SCSSCEEEECCCSSHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEE
T ss_pred CCCCCEEEEEcCChHHHH-HHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC-eEE
Confidence 999999999765544 55688999999999998877666543 3433332 223455554333221 122 123
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCce------eEEEc-Ccccc----hhhcch---HHHHHHHHHHHHc--CCCHHHHHHHH
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKV------PVVVG-NCTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRIDSAI 522 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~------~v~v~-~~~g~----v~nrl~---~~~~~Ea~~l~~~--G~~~~~id~a~ 522 (539)
+.+ +++.++.++++++.+|.. +++++ ...|. +.|.+. ...+.|++.+++. |++++++..++
T Consensus 150 ~gg---~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 150 PGG---SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp EEE---CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred ecC---CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 333 688999999999999988 66665 33443 346664 4567799999976 89999998887
No 137
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.49 E-value=3e-13 Score=133.41 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=113.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCCc
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (539)
||+|||+|.||.+++..|.+.|++|++||+++++++.+.+ .|.. ...++++ +. .+|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g~~-----------~~~~~~~~~~-~~~ 58 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-----------RQLV-----------DEAGQDLSLL-QTA 58 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTSC-----------SEEESCGGGG-TTC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----------CCCC-----------ccccCCHHHh-CCC
Confidence 7999999999999999999999999999999988766522 1210 0123445 44 899
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCC------------CCCee
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLL 456 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~------------~~~~v 456 (539)
|+||+|+|. .....++.++.+.++++++|++. ++.....+........++++.||+..+. .+..+
T Consensus 59 D~vi~av~~--~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~ 135 (279)
T 2f1k_A 59 KIIFLCTPI--QLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPY 135 (279)
T ss_dssp SEEEECSCH--HHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEE
T ss_pred CEEEEECCH--HHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcE
Confidence 999999994 45678888998899999988765 4444433322211122788988765221 22356
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
.++++..++++.++.++++++.+|..++++++
T Consensus 136 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 136 VLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp EEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 67777778999999999999999999988865
No 138
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.49 E-value=7.2e-14 Score=146.71 Aligned_cols=199 Identities=15% Similarity=0.123 Sum_probs=130.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH----HHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
||+|||+|.||.++|..|+++|++|++||+++++++.+.+.. +..+...+.. ....+++.+++++ ++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~--------~~~~g~l~~t~~~~~~ 73 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQ--------GRQTGRLSGTTDFKKA 73 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHH--------HHHTTCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHh--------hcccCceEEeCCHHHH
Confidence 799999999999999999999999999999999888764310 0000000000 0002346777777 56
Q ss_pred CCCcCEEEEcccCChh--------HHHHHHHHHHHhCCC---CeEEEecCCCCChHH----HhhccCC--CCc-----EE
Q 009256 385 FKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLNI----VGEKTSS--QDR-----II 442 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~--------~~~~~~~~l~~~~~~---~~ii~s~ts~~~~~~----i~~~~~~--~~r-----~v 442 (539)
+++||+||+|+|+... ....+++++.+++++ +++|+..+ +.++.. +...+.. ..+ .+
T Consensus 74 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v 152 (436)
T 1mv8_A 74 VLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGV 152 (436)
T ss_dssp HHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEE
T ss_pred hccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEE
Confidence 8999999999987653 144567889888888 88877543 333322 2222211 111 11
Q ss_pred EeccCCCCCCCCee---------eeecCCCCcHHHHHHHHHHHHHcCceeEEEcC-----cccchhhcch---HHHHHHH
Q 009256 443 GAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYSQSA 505 (539)
Q Consensus 443 g~h~~~p~~~~~~v---------ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~-----~~g~v~nrl~---~~~~~Ea 505 (539)
. ++|....+.. .++.+. ++++..+.+.++++.+|.. +++.+ ..+++.|.+. .++++|+
T Consensus 153 ~---~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 153 G---TNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp E---ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E---ECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2333322211 233332 3688999999999999984 44443 3356667654 5788999
Q ss_pred HHHHHc-CCCHHHHHHHH
Q 009256 506 RLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 506 ~~l~~~-G~~~~~id~a~ 522 (539)
..+++. |++++++++++
T Consensus 228 ~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHh
Confidence 999977 99999999998
No 139
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.49 E-value=6.6e-14 Score=138.78 Aligned_cols=185 Identities=15% Similarity=0.056 Sum_probs=125.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
|++|+|||+|.||..++..|++ |++|++||+++++.+.+.+. | +...+..+.+.+
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~ 55 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAE 55 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGG
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhC
Confidence 3589999999999999999999 99999999999887765331 1 111222256789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhccCC-CCcEEEeccCCCCC---CCCeeeeecC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH---VMPLLEIVRT 461 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~-~~r~vg~h~~~p~~---~~~~vei~~~ 461 (539)
+|+||+|+|.+..+. .+++++.+.++++++|++.++..+ ...+...+.. ...++..+.+.++. .+.+..++++
T Consensus 56 ~D~vi~~v~~~~~~~-~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~ 134 (289)
T 2cvz_A 56 ARVIFTCLPTTREVY-EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGG 134 (289)
T ss_dssp CSEEEECCSSHHHHH-HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCChHHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECC
Confidence 999999999665444 466788888888998885544332 2344444432 22344432111111 1222334443
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCc-cc----chhhcc---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC-TG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~-~g----~v~nrl---~~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
+++.++.+++++ .+|..++++++. .+ ++.|.+ +...+.|++.+++. |++++++...+
T Consensus 135 ---~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 135 ---PEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp ---CHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ---CHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 789999999999 999988888753 22 233553 34667799998876 99999998888
No 140
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.48 E-value=2.4e-13 Score=135.48 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=101.8
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEE
Q 009256 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (539)
Q Consensus 26 Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav 105 (539)
++++++..+...+.++.+++.. +-+|.|.-.++++ .|.+-.+. .........+ .++.++++|+|++|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~-~g~~ae~~----------g~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAY-PGKAAEER----------GQSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSC-CCHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCC-cchhhhhh----------hhHHHHHHHH-HHHHhCCCCEEEEE
Confidence 7899999999999999988764 4455554322222 12211110 0112233455 56899999999999
Q ss_pred cCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 009256 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (539)
Q Consensus 106 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 185 (539)
+|.|+|||+.++++||++||+++++|++ +.|.++++..+.+..+...|.++ +.++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999985 34555555555555555777777 7899999999999999998
Q ss_pred c
Q 009256 186 S 186 (539)
Q Consensus 186 ~ 186 (539)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 4
No 141
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.47 E-value=4e-13 Score=139.06 Aligned_cols=201 Identities=17% Similarity=0.177 Sum_probs=133.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH--------HHHHHhhHhcCCCCHHHHHHHhhcccc
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI--------EANVRGLVTRGKLTQDKANNALKMLKG 378 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (539)
.|.+|+|||+|.+|.++|.+|++.||+|+++|+|+++++.+.+.. ...+.+.++ .+++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~------------~g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALS------------SGRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH------------cCCeeE
Confidence 577999999999999999999999999999999999998875421 111212222 246788
Q ss_pred cCCc-cCCCCcCEEEEcccC--------ChhHHHHHHHHHHHhCC---CCeEEEecCCCCChHH---Hh-----hccCCC
Q 009256 379 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLNI---VG-----EKTSSQ 438 (539)
Q Consensus 379 ~~~~-~~~~~aDlVi~avpe--------~~~~~~~~~~~l~~~~~---~~~ii~s~ts~~~~~~---i~-----~~~~~~ 438 (539)
+++. +++++||++|+|||. |+.......+.|.++++ ++.+|+. .|++++.. +. +.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 8888 678999999999974 44556677777877764 4556553 33444321 11 111111
Q ss_pred CcEEEecc------------CCCCCCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEc----CcccchhhcchH---
Q 009256 439 DRIIGAHF------------FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG----NCTGFAVNRAFF--- 499 (539)
Q Consensus 439 ~r~vg~h~------------~~p~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~----~~~g~v~nrl~~--- 499 (539)
.-.++..| .+|+++ ++++ +++++.+.+..+++.+....++.+ +...++.|.++.
T Consensus 167 ~f~v~~~PErl~eG~a~~d~~~~~ri-----ViG~--~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnI 239 (444)
T 3vtf_A 167 KFSVASNPEFLREGSALEDFFKPDRI-----VIGA--GDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKI 239 (444)
T ss_dssp CCEEEECCCCCCTTSHHHHHHSCSCE-----EEEE--SSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred CceeecCcccccCCccccccccCCcE-----EEcC--CCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHH
Confidence 11222211 122221 3333 467888999999998876655543 333466675543
Q ss_pred HHHHHHHHHHHc-CCCHHHHHHHH-H--hCCC
Q 009256 500 PYSQSARLLVSL-GVDVFRIDSAI-R--SFGL 527 (539)
Q Consensus 500 ~~~~Ea~~l~~~-G~~~~~id~a~-~--~~g~ 527 (539)
+++||...+++. |++..+|-+++ . .+|+
T Consensus 240 a~~NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 240 SFANEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 889999999987 99999999888 3 4554
No 142
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.47 E-value=6.9e-14 Score=133.11 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=111.3
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~-~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (539)
+.|+||+|||+|.||.++|..|+++|++|++ ||+++++++.+.+.. + .....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4467999999999999999999999999999 999999877764321 1 0111233366
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--------------hHHHhhccCCCCcEEEeccCCCC
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPA 450 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--------------~~~i~~~~~~~~r~vg~h~~~p~ 450 (539)
+.++|+||+|+| +....+++.++.+ + ++++|++.++++. ...+++.++ ..+++...++.++
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 789999999998 5556777777766 4 4778888887773 445666665 3466666554433
Q ss_pred CCC---------CeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 451 HVM---------PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 451 ~~~---------~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
... +...++.+ .+++..+.++++++.+|+.++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 221 12233333 3699999999999999999999876
No 143
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.47 E-value=2.4e-13 Score=132.80 Aligned_cols=179 Identities=11% Similarity=0.066 Sum_probs=123.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G----~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+||+|||+|.||.+++..|+++| ++|++||+++++ .| +...++. +
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~~ 54 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNEE 54 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHHH
Confidence 58999999999999999999999 799999999764 01 2233344 5
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCCCCCCee-eeecCC
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL-EIVRTE 462 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~~~~~~v-ei~~~~ 462 (539)
.+++||+||+|+|.+ ....++.++.+++ ++.++++.++++....+...+....+++...+..|......+ .+++++
T Consensus 55 ~~~~~D~vi~~v~~~--~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 131 (262)
T 2rcy_A 55 LARHCDIIVCAVKPD--IAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNK 131 (262)
T ss_dssp HHHHCSEEEECSCTT--THHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHhcCCEEEEEeCHH--HHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeCC
Confidence 578899999999943 4677888888888 566777888888888777766543344433333333333333 355777
Q ss_pred CCcHHHHHHHHHHHHHcCceeEEEcCcc-cc------hhhcchHHHHHHHHH--HHHcCCCHHHHHHHH
Q 009256 463 RTSAQVILDLMTVGKIIKKVPVVVGNCT-GF------AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (539)
Q Consensus 463 ~t~~e~~~~~~~l~~~lg~~~v~v~~~~-g~------v~nrl~~~~~~Ea~~--l~~~G~~~~~id~a~ 522 (539)
.++++.++.++++++.+|. ++++++.. +. ..|.+++.+ .|++. ..+.|+++++..+.+
T Consensus 132 ~~~~~~~~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~~~-~~al~~~~~~~Gl~~~~~~~~~ 198 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLF-IESLIDAGVKNGLSRELSKNLV 198 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHHHH-HHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHH
Confidence 7899999999999999997 88886421 11 112233222 23332 345599887655554
No 144
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.46 E-value=3.9e-13 Score=142.39 Aligned_cols=190 Identities=13% Similarity=0.033 Sum_probs=131.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
.++|+|||+|.||.++|..|+++|++|++||+++++++.+.+... + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ---------D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---------T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc---------C-----------CCeEEeCCHHHHHh
Confidence 358999999999999999999999999999999998877644210 0 124445555 4444
Q ss_pred ---CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccCC-CCcEEEeccCCCCC---CCCeee
Q 009256 387 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPAH---VMPLLE 457 (539)
Q Consensus 387 ---~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~-~~r~vg~h~~~p~~---~~~~ve 457 (539)
++|+||+|+|.+..+. .+++++.+.++++++|++.+++.+. ..+...+.. ..++++.....++. .++ .
T Consensus 65 ~l~~aDvVilavp~~~~v~-~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAATD-ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 4999999999765544 5668888999999988877766643 345444432 33455543322221 122 1
Q ss_pred eecCCCCcHHHHHHHHHHHHHcCce--------eEEEcC-ccc----chhhcch---HHHHHHHHHHHHc--CCCHHHHH
Q 009256 458 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (539)
Q Consensus 458 i~~~~~t~~e~~~~~~~l~~~lg~~--------~v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~--G~~~~~id 519 (539)
++.+. +++.++.++++++.+|.. +.++++ ..| ++.|.+. ...+.|++.+++. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 33332 789999999999999987 456654 233 3456553 3567799999875 89999998
Q ss_pred HHH
Q 009256 520 SAI 522 (539)
Q Consensus 520 ~a~ 522 (539)
+++
T Consensus 220 ~l~ 222 (474)
T 2iz1_A 220 AIF 222 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 145
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.45 E-value=4.4e-13 Score=133.99 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=106.8
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEE
Q 009256 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (539)
Q Consensus 26 Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav 105 (539)
+.++++..+...++++.++... +-+|.|.-.++++. |....+. .........+ .++.++++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999888764 44565543332221 2211110 0112233455 56899999999999
Q ss_pred cCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 009256 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (539)
Q Consensus 106 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 185 (539)
+|.|.|||+.++++||++||.++++|++ +.|.++++.++.+..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999996 45777878888887788888888 6799999999999999998
Q ss_pred c
Q 009256 186 S 186 (539)
Q Consensus 186 ~ 186 (539)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 4
No 146
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.42 E-value=8.6e-13 Score=129.02 Aligned_cols=173 Identities=13% Similarity=0.084 Sum_probs=115.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
||+|||+|.||.++|..|+++|++|++||+ +++.++.+.+ .| +. ++. +.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~~ 55 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDVY 55 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHHh
Confidence 799999999999999999999999999998 6666554422 11 12 333 5578
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh---HHHhhccCCCCcEEEeccCCCCC---CCCeeeeec
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIVR 460 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~---~~i~~~~~~~~r~vg~h~~~p~~---~~~~vei~~ 460 (539)
+||+||+|+|++..... +.++.+.+++ ++++. ++..+ ..+.+.+.... ++..+.+.+|. .+.. .+++
T Consensus 56 ~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~~ 128 (264)
T 1i36_A 56 SCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIAS 128 (264)
T ss_dssp TSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEEE
T ss_pred cCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEec
Confidence 99999999997665433 3567777766 55554 44433 35565555433 66666655543 2333 3445
Q ss_pred CCCCcHHHHHHHHHHHHHcCceeEEEcCcccc-----hhhcch----HHHHHHHHHHHHc-CCCHHHHHHHH
Q 009256 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (539)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~-----v~nrl~----~~~~~Ea~~l~~~-G~~~~~id~a~ 522 (539)
++. + +.+++ ++.+|+.++++++.+|. ++|+.+ ...+.|++.+++. |++++ .-+.+
T Consensus 129 g~~---~--~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~ 193 (264)
T 1i36_A 129 GRD---A--EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEML 193 (264)
T ss_dssp STT---H--HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHH
T ss_pred CCc---H--HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHH
Confidence 532 2 67888 99999999898764443 233332 3567799988866 99876 44555
No 147
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.42 E-value=7.1e-13 Score=140.37 Aligned_cols=193 Identities=12% Similarity=0.055 Sum_probs=130.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC--
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK-- 386 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-- 386 (539)
+|+|||+|.||..+|..|+++|++|++||+++++++.+.+.. |... . -..+..++++ +.++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~----------g~~~-~-----~~~i~~~~~~~e~v~~l 66 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN----------ASAP-F-----AGNLKAFETMEAFAASL 66 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TTST-T-----GGGEEECSCHHHHHHHB
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------CCCC-C-----CCCeEEECCHHHHHhcc
Confidence 799999999999999999999999999999999887764421 1000 0 0124455555 3344
Q ss_pred -CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCCC---CCCeeeee
Q 009256 387 -DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEIV 459 (539)
Q Consensus 387 -~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~~---~~~~vei~ 459 (539)
++|+||+|+|....+ +.+++++.+.++++++|++.+++.+.. .+.+.+. ....+++.....++. .++ ..++
T Consensus 67 ~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~ 144 (478)
T 1pgj_A 67 KKPRKALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFP 144 (478)
T ss_dssp CSSCEEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEE
T ss_pred cCCCEEEEecCChHHH-HHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC-eEec
Confidence 599999999976554 456688889999999888777666432 3444332 233455543322221 122 1223
Q ss_pred cCCCCcHHHHHHHHHHHHHcCce-------eEEEcC-ccc----chhhcch---HHHHHHHHHHHHc-CCCHHHHHHHHH
Q 009256 460 RTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAIR 523 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~-------~v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~-G~~~~~id~a~~ 523 (539)
.+ +++.++.++++++.+|.. ++++++ ..| ++.|.+. ...+.|++.+++. |++++++..++.
T Consensus 145 gg---~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 145 GG---TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp EE---CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 33 688999999999999987 556654 223 2346543 3567799998877 899999888873
No 148
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.41 E-value=7.2e-13 Score=132.03 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=105.7
Q ss_pred CcceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 307 GVRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 307 ~~~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
.+++|+||| +|.||.++|..|++.|++|++||++++. +..+.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~ 63 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESIL 63 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHh
Confidence 356899999 9999999999999999999999998752 000346
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhccCCCCcEEEeccCCCCC----CCCeeeee
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIV 459 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~~~~~r~vg~h~~~p~~----~~~~vei~ 459 (539)
.+||+||+|+|.+. ...+++++.++++++++|++.++... ...+.... +.++++.||+.++. .+..+.++
T Consensus 64 ~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 64 ANADVVIVSVPINL--TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp TTCSEEEECSCGGG--HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEE
T ss_pred cCCCEEEEeCCHHH--HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEe
Confidence 78999999999554 77888999999999998776544322 23344333 46899999865543 23345555
Q ss_pred cCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
++. +++.++.++++++.+|..++++.+
T Consensus 140 ~~~--~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 140 DGR--FPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp EEE--CGGGTHHHHHHHHHTTCEEEECCH
T ss_pred cCC--CHHHHHHHHHHHHHcCCEEEECCH
Confidence 543 678899999999999999888853
No 149
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.37 E-value=8.5e-13 Score=140.09 Aligned_cols=191 Identities=13% Similarity=0.061 Sum_probs=129.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC--
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-- 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-- 385 (539)
++|+|||+|.||..+|..|+++|++|++||+++++++.+.+.. . .+ ..+..++++ +.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~-~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE-------A-KG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT-------T-TT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcc-------c-cC-----------CCeEEeCCHHHHHhh
Confidence 3799999999999999999999999999999999887764310 0 01 123445555 333
Q ss_pred -CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccCCCCC---CCCeeee
Q 009256 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (539)
Q Consensus 386 -~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~~p~~---~~~~vei 458 (539)
+++|+||+|+|....+. .++.++.++++++++|++.+++.+.. .+.+.+. ....++++....++. .++.+ +
T Consensus 64 l~~aDvVilaVp~~~~v~-~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i-~ 141 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAVD-NFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSL-M 141 (482)
T ss_dssp BCSSCEEEECSCTTHHHH-HHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEE-E
T ss_pred ccCCCEEEEeCCChHHHH-HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeE-E
Confidence 58999999999765544 56678889999999888777766543 3433332 233455553322221 12212 3
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCcee-------EEEcC-ccc----chhhcch---HHHHHHHHHHHHc--CCCHHHHHHH
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~-------v~v~~-~~g----~v~nrl~---~~~~~Ea~~l~~~--G~~~~~id~a 521 (539)
+.+ +++.++.++++++.+|..+ +++++ ..| ++.|.+. ...+.|++.+++. |++++++.++
T Consensus 142 ~gg---~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 142 PGG---NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEE---CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred eCC---CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 333 5788999999999999876 45542 223 3456554 3567799988864 8999999888
Q ss_pred HH
Q 009256 522 IR 523 (539)
Q Consensus 522 ~~ 523 (539)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 150
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.37 E-value=1.3e-12 Score=132.27 Aligned_cols=181 Identities=16% Similarity=0.103 Sum_probs=120.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||.++|..|.+.|++|+++|++++. .+.+. +.| +... +. +.++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~~ 71 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAVA 71 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHHh
Confidence 57999999999999999999999999999999765 33221 112 2222 44 5678
Q ss_pred CcCEEEEcccCChhHHHHHHH-HHHHhCCCCeEEEecCCCCChHHHhhcc-CCCCcEEEeccCCCCCC---------CCe
Q 009256 387 DVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MPL 455 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~-~l~~~~~~~~ii~s~ts~~~~~~i~~~~-~~~~r~vg~h~~~p~~~---------~~~ 455 (539)
+||+||+|+|.+. ...++. ++.++++++++|++. +++.. .+.... .....+++.||..|.+. +..
T Consensus 72 ~aDvVilavp~~~--~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~ 147 (338)
T 1np3_A 72 AADVVMILTPDEF--QGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIP 147 (338)
T ss_dssp TCSEEEECSCHHH--HHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCC
T ss_pred cCCEEEEeCCcHH--HHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCe
Confidence 9999999999544 467887 888899999988865 44444 333322 12235899999766531 233
Q ss_pred eeeecCCCCcHHHHHHHHHHHHHcCc-e--eEEEc----C-cccchhhcchH----HHHHHHH-HHHHcCCCHHHH
Q 009256 456 LEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFF----PYSQSAR-LLVSLGVDVFRI 518 (539)
Q Consensus 456 vei~~~~~t~~e~~~~~~~l~~~lg~-~--~v~v~----~-~~g~v~nrl~~----~~~~Ea~-~l~~~G~~~~~i 518 (539)
+-++++..++++..+.+..+++.+|. . ++.+. + ...+..+..++ .++..++ .+++.|+++++-
T Consensus 148 ~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 148 DLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 33566667788999999999999998 4 55552 1 22333332322 2222222 335679887643
No 151
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.36 E-value=2e-12 Score=122.08 Aligned_cols=156 Identities=16% Similarity=0.169 Sum_probs=112.2
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 310 kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
||+||| +|.||..++..|+++|++|+++|+++++.+.+.+.+.. .+.. ..+.. ++. +.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~~ 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAEA 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHhc
Confidence 799999 99999999999999999999999999887766443211 1110 11221 233 55788
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--------------hHHHhhccCCCCcEEEeccCCCC---
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPA--- 450 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--------------~~~i~~~~~~~~r~vg~h~~~p~--- 450 (539)
+|+||.++|.+ ....++.++.+.++ ++++++.++++. ..++++.+.. .+++..++..+.
T Consensus 65 ~D~Vi~~~~~~--~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~v~~~~~~~~~~~ 140 (212)
T 1jay_A 65 CDIAVLTIPWE--HAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EKVVSALHTIPAARF 140 (212)
T ss_dssp CSEEEECSCHH--HHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SCEEECCTTCCHHHH
T ss_pred CCEEEEeCChh--hHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-CeEEEEccchHHHHh
Confidence 99999999843 35577777777664 888888888766 4667666653 577776543322
Q ss_pred ----CCCCeeeeecCCCCcHHHHHHHHHHHHHc-CceeEEEcC
Q 009256 451 ----HVMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 488 (539)
Q Consensus 451 ----~~~~~vei~~~~~t~~e~~~~~~~l~~~l-g~~~v~v~~ 488 (539)
....+..+++++ +++.++.++++++.+ |+.++++++
T Consensus 141 ~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 141 ANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 112345566664 689999999999999 999999976
No 152
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.36 E-value=1.6e-12 Score=125.76 Aligned_cols=165 Identities=12% Similarity=0.076 Sum_probs=101.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHH-HHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY--LLKGIKTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~--~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (539)
.+||+|||+|.||.+||..|+++|++|++||+++++ .+.......+. +..+.+. .+.....+..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~e~ 87 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----------HPHVHLAAFADV 87 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----------STTCEEEEHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----------cCceeccCHHHH
Confidence 468999999999999999999999999999999886 11110000000 0011111 011222222266
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHH-HHhCCCCeEEEecCCCC----------------Ch-HHHhhccCCCCcEE-Eec
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRII-GAH 445 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l-~~~~~~~~ii~s~ts~~----------------~~-~~i~~~~~~~~r~v-g~h 445 (539)
+++||+||+|+|.+.. ..++.++ .+.+ ++++|++.+.++ .. ..+++.++. .+++ +++
T Consensus 88 ~~~aDvVilavp~~~~--~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~~~ 163 (245)
T 3dtt_A 88 AAGAELVVNATEGASS--IAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKTLN 163 (245)
T ss_dssp HHHCSEEEECSCGGGH--HHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEECST
T ss_pred HhcCCEEEEccCcHHH--HHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEeec
Confidence 7899999999996543 3556667 6666 777887776322 22 244554543 4554 344
Q ss_pred cCCCCC--------CCCeeeeecCCCCcHHHHHHHHHHHHHcCce-eEEEcCc
Q 009256 446 FFSPAH--------VMPLLEIVRTERTSAQVILDLMTVGKIIKKV-PVVVGNC 489 (539)
Q Consensus 446 ~~~p~~--------~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~-~v~v~~~ 489 (539)
+.+.|. .+++..++.++ ++++++.++++++.+|.. ++++++.
T Consensus 164 ~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~~ 214 (245)
T 3dtt_A 164 TMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGDI 214 (245)
T ss_dssp TSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEESG
T ss_pred ccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCcH
Confidence 433221 22333344442 789999999999999976 4778763
No 153
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.35 E-value=3.4e-13 Score=113.31 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=46.6
Q ss_pred HcCceeE-EEcCcccchhhcchHHHHHHHHHHHHcCC-CHHHHHHHH-HhCCCCcchhhccccCC
Q 009256 478 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQEGGCWS 539 (539)
Q Consensus 478 ~lg~~~v-~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~-~~~~id~a~-~~~g~~~Gpf~~~d~~~ 539 (539)
.++|.+| .++|.+||++||++.++++||..++++|+ +++|||.++ .++|||+|||+++|.++
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~G 67 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFG 67 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHC
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHH
Confidence 3678899 88999999999999999999999999997 999999999 69999999999999753
No 154
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.32 E-value=1.9e-12 Score=132.81 Aligned_cols=197 Identities=14% Similarity=0.046 Sum_probs=120.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
|+||+|||+|.||.++|..|+++|++|++||+++++++.+.+... ......... ....+..+++. +.++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRE-------NVLFLKGVQ---LASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTB-------CTTTSTTCB---CCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCc-------ccccccccc---cccceeeeCCHHHHHc
Confidence 458999999999999999999999999999999988776643210 000000000 00124445565 5578
Q ss_pred CcCEEEEcccCChhHHHHHHHH----HHHhCCC-CeEEEecCCCCChHH---HhhccCC--CC-c-EEEeccCCCCC--C
Q 009256 387 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD-R-IIGAHFFSPAH--V 452 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~----l~~~~~~-~~ii~s~ts~~~~~~---i~~~~~~--~~-r-~vg~h~~~p~~--~ 452 (539)
+||+||+|+|+ .....++.+ +.+++++ +++|++.++++.+.. +...+.. +. . .+...|..+.. .
T Consensus 85 ~aDvVilav~~--~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~ 162 (366)
T 1evy_A 85 GAEIILFVIPT--QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVAT 162 (366)
T ss_dssp TCSSEEECCCH--HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHT
T ss_pred CCCEEEECCCh--HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHh
Confidence 99999999994 556778887 8888887 888888776765532 1111111 11 1 11111111110 1
Q ss_pred C-CeeeeecCCCCcHHHHHHHHHHHHHc--CceeEEEcCccc----------------------chhhc---chHHHHHH
Q 009256 453 M-PLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCTG----------------------FAVNR---AFFPYSQS 504 (539)
Q Consensus 453 ~-~~vei~~~~~t~~e~~~~~~~l~~~l--g~~~v~v~~~~g----------------------~v~nr---l~~~~~~E 504 (539)
+ +...++.+ .+++.++.+++++... |..+++..|..+ +..|. +....+.|
T Consensus 163 g~~~~~~~~~--~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E 240 (366)
T 1evy_A 163 GVFTCVSIAS--ADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLE 240 (366)
T ss_dssp TCCEEEEEEC--SSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEec--CCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHH
Confidence 1 11112222 3678899999999999 877777666432 11221 23356679
Q ss_pred HHHHHHc-CCCHHHH
Q 009256 505 ARLLVSL-GVDVFRI 518 (539)
Q Consensus 505 a~~l~~~-G~~~~~i 518 (539)
++.+++. |++++++
T Consensus 241 ~~~la~a~Gi~~~~~ 255 (366)
T 1evy_A 241 IRDLTAALGGDGSAV 255 (366)
T ss_dssp HHHHHHHTTCCCTTT
T ss_pred HHHHHHHhCCCCccc
Confidence 9999976 9866543
No 155
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.32 E-value=1.1e-11 Score=128.40 Aligned_cols=200 Identities=20% Similarity=0.233 Sum_probs=123.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHh----hcccccCCc-cC
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL----KMLKGVLDY-SE 384 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~-~~ 384 (539)
||+|||+|.||.++|..|++ |++|++||+++++++.+.+.. ..+........+ .++.+++++ ++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGL----------SPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCC----------CCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 79999999999999999999 999999999999888764321 001111111111 245566666 66
Q ss_pred CCCcCEEEEcccCCh---------hHHHHHHHHHHHhCCCCeEEEe-cCCCCCh-HHHhhccCCCCcEEEec-cCCCCCC
Q 009256 385 FKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAH-FFSPAHV 452 (539)
Q Consensus 385 ~~~aDlVi~avpe~~---------~~~~~~~~~l~~~~~~~~ii~s-~ts~~~~-~~i~~~~~~~~r~vg~h-~~~p~~~ 452 (539)
+++||+||+|+|... .....+++.+.+ ++++++|+. +|.+... ..+...+... .++... +..+...
T Consensus 71 ~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G~a 148 (402)
T 1dlj_A 71 YKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRESKA 148 (402)
T ss_dssp HHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTTST
T ss_pred hcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCcch
Confidence 889999999999764 146677788888 788888775 3333332 2444444322 232211 1111110
Q ss_pred C-----CeeeeecCCCC----cHHHHHHHHHHHHHcC-c-e-eEEEcCcc-----cchhhcch---HHHHHHHHHHHHc-
Q 009256 453 M-----PLLEIVRTERT----SAQVILDLMTVGKIIK-K-V-PVVVGNCT-----GFAVNRAF---FPYSQSARLLVSL- 511 (539)
Q Consensus 453 ~-----~~vei~~~~~t----~~e~~~~~~~l~~~lg-~-~-~v~v~~~~-----g~v~nrl~---~~~~~Ea~~l~~~- 511 (539)
. +--.++++... ..+..+.+.+++..-+ . . ++++++.. .++.|-++ .+++||+..+++.
T Consensus 149 ~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~ 228 (402)
T 1dlj_A 149 LYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESR 228 (402)
T ss_dssp THHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00013344321 1255677788887533 2 2 56665522 34556543 3678999999977
Q ss_pred CCCHHHHHHHH
Q 009256 512 GVDVFRIDSAI 522 (539)
Q Consensus 512 G~~~~~id~a~ 522 (539)
|+++.++.+++
T Consensus 229 Gid~~~v~~~~ 239 (402)
T 1dlj_A 229 KLNSHMIIQGI 239 (402)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 99999999988
No 156
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.28 E-value=5.6e-12 Score=118.80 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=100.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
.++|+|||+|.||.++|..|+++|++|++||++++ .+++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~~ 57 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATTL 57 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhcc
Confidence 45899999999999999999999999999998864 3578
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC---------------hHHHhhccCCCCcEEE-eccCCCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPAH 451 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~---------------~~~i~~~~~~~~r~vg-~h~~~p~~ 451 (539)
||+||+|+| ....+.+++++.+.++ ++++++.+++++ ...+++.++ ..+++. .|+...|.
T Consensus 58 aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p~ 133 (209)
T 2raf_A 58 GEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAAT 133 (209)
T ss_dssp CSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHHH
T ss_pred CCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHhh
Confidence 999999999 4456678888888777 888888877665 234555554 356777 55543221
Q ss_pred C--------CCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 452 V--------MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 452 ~--------~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
. .+...++.+ .+++..+.++++++.+|..++++++
T Consensus 134 ~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 134 LQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred ccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 1 122223333 3678999999999999999998877
No 157
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.27 E-value=3.9e-12 Score=120.46 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=100.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.+++|+|||+|.||..++..|.+.|++|+++|+++++.+.+.+ .+ +... +. +.+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~-~~~~~~ 81 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-----------SA-------------AQVT-FQEEAV 81 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-----------TT-------------SEEE-EHHHHT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------Ccee-cHHHHH
Confidence 4568999999999999999999999999999999887665411 11 2222 33 567
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh----------hccCCCCcEEEeccCCCC-----
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGAHFFSPA----- 450 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~----------~~~~~~~r~vg~h~~~p~----- 450 (539)
+++|+||+++|.+. .+.+++ +.+.. +++++++.+++.+...+. ..++ ..++++.. ++.
T Consensus 82 ~~~DvVi~av~~~~--~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~~--n~~~~~~~ 154 (215)
T 2vns_A 82 SSPEVIFVAVFREH--YSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKAF--NVISAWTL 154 (215)
T ss_dssp TSCSEEEECSCGGG--SGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEEC--TTBCHHHH
T ss_pred hCCCEEEECCChHH--HHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEecc--ccccHhHh
Confidence 89999999999532 344444 55555 688888888888765442 3333 23454421 211
Q ss_pred ----CCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 451 ----HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 451 ----~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
..++...++.+ .+++.++.++++++.+|..++++++
T Consensus 155 ~~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 155 QAGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp HTCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred cccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 11111112222 2789999999999999999999976
No 158
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.26 E-value=5.6e-12 Score=129.80 Aligned_cols=196 Identities=10% Similarity=-0.045 Sum_probs=122.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-------CeEEEEeCChH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhc
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 375 (539)
++||+|||+|.||.+||..|+++| ++|++||++++ .++.+.+.. ......... ....+
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~~---~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKH-------ENTKYLKGV---PLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHC-------BCTTTSTTC---BCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcC-------cccccCCcc---cCcCC
Confidence 468999999999999999999999 99999999987 555543210 000000000 00023
Q ss_pred ccccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHH----hCCCCeEEEecCCCCChH-----HH----hhccCCCCcE
Q 009256 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDLN-----IV----GEKTSSQDRI 441 (539)
Q Consensus 376 i~~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~----~~~~~~ii~s~ts~~~~~-----~i----~~~~~~~~r~ 441 (539)
+..+++. +++++||+||+|+|+ ...+.++.++.+ .+++++++++.++++.+. .+ ...+..+ ..
T Consensus 91 i~~~~~~~ea~~~aDvVilav~~--~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~ 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVPC--QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CS 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCCH--HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EE
T ss_pred eEEECCHHHHHcCCCEEEEcCCH--HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EE
Confidence 4556666 567899999999994 567888889988 888999999888776551 11 2222211 11
Q ss_pred EEeccCCCCC--C-CCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc----------------------chhhc
Q 009256 442 IGAHFFSPAH--V-MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVNR 496 (539)
Q Consensus 442 vg~h~~~p~~--~-~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g----------------------~v~nr 496 (539)
+-..|..+.. . .+...++.+ .+++..+.++++|+..|..+++..|..| +..|.
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~~--~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~ 245 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIGG--NDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNS 245 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEEC--SCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred EEeCCchHHHHHhCCCeEEEEec--CCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhH
Confidence 1111211110 0 111112222 3678899999999999998888877533 11232
Q ss_pred c---hHHHHHHHHHHHHc-C--CCHHHH
Q 009256 497 A---FFPYSQSARLLVSL-G--VDVFRI 518 (539)
Q Consensus 497 l---~~~~~~Ea~~l~~~-G--~~~~~i 518 (539)
. ....+.|+..+++. | ++++.+
T Consensus 246 ~~a~~~~~~~E~~~la~a~G~G~~~~~~ 273 (375)
T 1yj8_A 246 KSAIIRNGINEMILFGKVFFQKFNENIL 273 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcchh
Confidence 2 33456699888865 4 776554
No 159
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.25 E-value=6.6e-12 Score=128.16 Aligned_cols=197 Identities=16% Similarity=0.031 Sum_probs=123.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-------CeEEEEeCChH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhc
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 375 (539)
++||+|||+|.||.++|..|+++| ++|++||++++ ..+.+.+.... ..+. .+. . ...+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~--~~~~-~~~-~------~~~~ 77 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHEN--VKYL-PGH-K------LPPN 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCC--TTTS-TTC-C------CCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcc--cccC-Ccc-c------CccC
Confidence 458999999999999999999999 99999999988 66554321000 0000 000 0 0023
Q ss_pred ccccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--------HH-HhhccCCCCcEEEec
Q 009256 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NI-VGEKTSSQDRIIGAH 445 (539)
Q Consensus 376 i~~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--------~~-i~~~~~~~~r~vg~h 445 (539)
+..+++. +++++||+||+|+|+ .....+++++.++++++++|++.++++.. .+ +...+..+ ..+-..
T Consensus 78 ~~~~~~~~~~~~~aD~Vilav~~--~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~~g 154 (354)
T 1x0v_A 78 VVAVPDVVQAAEDADILIFVVPH--QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVLMG 154 (354)
T ss_dssp EEEESSHHHHHTTCSEEEECCCG--GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEEEC
T ss_pred eEEEcCHHHHHcCCCEEEEeCCH--HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEEEC
Confidence 4455566 567899999999995 45778889999999999999988887653 11 12222211 111112
Q ss_pred cCCCCC--CCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc----------------------chhh---cch
Q 009256 446 FFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVN---RAF 498 (539)
Q Consensus 446 ~~~p~~--~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g----------------------~v~n---rl~ 498 (539)
|..+.. .+....++.+ ..+++..+.++++++..|..+++..|..+ +..| .+.
T Consensus 155 p~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~ 233 (354)
T 1x0v_A 155 ANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVI 233 (354)
T ss_dssp SCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHH
Confidence 221111 1111112212 23678899999999999988888776432 1123 123
Q ss_pred HHHHHHHHHHHHc-CC---CHHHH
Q 009256 499 FPYSQSARLLVSL-GV---DVFRI 518 (539)
Q Consensus 499 ~~~~~Ea~~l~~~-G~---~~~~i 518 (539)
...++|+..+++. |+ +++++
T Consensus 234 ~~~~~E~~~la~a~G~~~~~~~~~ 257 (354)
T 1x0v_A 234 RLGLMEMIAFAKLFCSGPVSSATF 257 (354)
T ss_dssp HHHHHHHHHHHHHHSSSCCCGGGG
T ss_pred HHHHHHHHHHHHHhcCCCCCcccc
Confidence 4566799999977 88 77653
No 160
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.25 E-value=1.7e-11 Score=122.88 Aligned_cols=202 Identities=10% Similarity=-0.008 Sum_probs=124.7
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-----C-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHH-HHHhhccccc
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA-NNALKMLKGV 379 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-----G-~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 379 (539)
.++||+|||+|.||..+|..|+++ | ++|++||+ +++++.+.+. .|....... ......+..+
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~ 75 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVT 75 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEe
Confidence 335899999999999999999999 9 99999999 7766655320 110000000 0000012223
Q ss_pred CCccCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhccCCCCcEEEeccCCCCCC------
Q 009256 380 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAHFFSPAHV------ 452 (539)
Q Consensus 380 ~~~~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~~~~~r~vg~h~~~p~~~------ 452 (539)
++.+.+.++|+||.|+|... ...+++++.+.++++++|++.+.++.. ..+.+.++...-+.|+.+...+..
T Consensus 76 ~~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~ 153 (317)
T 2qyt_A 76 DNPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAPGLIT 153 (317)
T ss_dssp SCHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEE
T ss_pred cCccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEE
Confidence 44455789999999999665 467788898888888888887778776 355555543222223332221111
Q ss_pred --CCeeee-ecC--CCCcHHHHHHHHHHHHHcCceeEEEcCccc-----chhhc----------------------chHH
Q 009256 453 --MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNR----------------------AFFP 500 (539)
Q Consensus 453 --~~~vei-~~~--~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g-----~v~nr----------------------l~~~ 500 (539)
.....+ +.. +..+++.+ .+.++++..|..+++.++..+ ++.|- +...
T Consensus 154 ~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~ 232 (317)
T 2qyt_A 154 LEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLS 232 (317)
T ss_dssp EEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHH
T ss_pred EcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 111112 322 33456777 899999999988777766322 23332 3335
Q ss_pred HHHHHHHHHHc-CCCH--HHHHHHH
Q 009256 501 YSQSARLLVSL-GVDV--FRIDSAI 522 (539)
Q Consensus 501 ~~~Ea~~l~~~-G~~~--~~id~a~ 522 (539)
.+.|+..+++. |+++ +.+.+.+
T Consensus 233 ~~~E~~~v~~a~G~~~~~~~~~~~~ 257 (317)
T 2qyt_A 233 LLEEVAELFRAKYGQVPDDVVQQLL 257 (317)
T ss_dssp HHHHHHHHHHHHTSCCCSSHHHHHH
T ss_pred HHHHHHHHHHHcCCCCChHHHHHHH
Confidence 67799999866 9854 3555555
No 161
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.25 E-value=5e-12 Score=125.12 Aligned_cols=186 Identities=11% Similarity=-0.021 Sum_probs=119.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCcC
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~aD 389 (539)
||+|||+|.||.++|..|+++|++|++||+++++++.+ ...+. .... ....+. .++.+.++++|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~-~~~~---~~~~~~-~~~~~~~~~~d 65 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVET-DGSI---FNESLT-ANDPDFLATSD 65 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECT-TSCE---EEEEEE-ESCHHHHHTCS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcC-CCce---eeeeee-ecCccccCCCC
Confidence 79999999999999999999999999999998654321 11110 0000 000111 22335678899
Q ss_pred EEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhhccCCCCcEE-EeccC----CCCC-----CCCeeee
Q 009256 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFF----SPAH-----VMPLLEI 458 (539)
Q Consensus 390 lVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~-~i~~~~~~~~r~v-g~h~~----~p~~-----~~~~vei 458 (539)
+||.|+|.+. ...+++++.++++++++|++.++++... .+.+.+. . ++ |.++. ..|. .+. +.+
T Consensus 66 ~vi~~v~~~~--~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p~~~~~~~g~-~~i 139 (291)
T 1ks9_A 66 LLLVTLKAWQ--VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGNVIIHVANGI-THI 139 (291)
T ss_dssp EEEECSCGGG--HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETTEEEEEECCC-EEE
T ss_pred EEEEEecHHh--HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCCEEEEecccc-eEE
Confidence 9999999664 5778889999999898888877777553 4444432 2 43 43332 1111 011 112
Q ss_pred ecCCCCcHHHHHHHHHHHHHcCceeEEEcCcccchh-----h---------------------cchHHHHHHHHHHHHc-
Q 009256 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV-----N---------------------RAFFPYSQSARLLVSL- 511 (539)
Q Consensus 459 ~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~-----n---------------------rl~~~~~~Ea~~l~~~- 511 (539)
... ..+++.++.++++++.+|..+++.++..+... | .++...+.|++.+++.
T Consensus 140 ~~~-~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~ 218 (291)
T 1ks9_A 140 GPA-RQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE 218 (291)
T ss_dssp EES-SGGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHH
T ss_pred ccC-CCCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHc
Confidence 221 23567788999999999998888877443222 2 2334567799998876
Q ss_pred CCCH--HHH
Q 009256 512 GVDV--FRI 518 (539)
Q Consensus 512 G~~~--~~i 518 (539)
|+++ +++
T Consensus 219 G~~~~~~~~ 227 (291)
T 1ks9_A 219 GHHTSAEDL 227 (291)
T ss_dssp TCCCCHHHH
T ss_pred CCCCCHHHH
Confidence 9843 555
No 162
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.24 E-value=4.3e-11 Score=121.16 Aligned_cols=187 Identities=13% Similarity=0.008 Sum_probs=112.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
+||+|||+|.||++||..|+++|++|++||+++++++.+.+.. ... ...... + .+..+++.+.+.++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g-------~~~-~~~~~~----~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSH-------TSP-YVEESK----I-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHS-------CBT-TBTTCC----C-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC-------Ccc-cCCCCe----e-eEEEeCCHHHhcCC
Confidence 4899999999999999999999999999999998877664320 000 000000 0 24455566338899
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH---Hhh----ccCCCCcEEEeccCCCCC--CCCeeeee
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGE----KTSSQDRIIGAHFFSPAH--VMPLLEIV 459 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~---i~~----~~~~~~r~vg~h~~~p~~--~~~~vei~ 459 (539)
|+||.|+|. .....++.++.+ +++++++.+.++...+ +.+ ... -...+...|..+.. .+....++
T Consensus 82 DvVil~vk~--~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~~~g~~~~~~ 155 (335)
T 1z82_A 82 DILVIAIPV--QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEVAKKLPTAVT 155 (335)
T ss_dssp EEEEECSCG--GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHHHTTCCEEEE
T ss_pred CEEEEECCH--HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHHhCCCceEEE
Confidence 999999984 344555555443 6778887776655422 111 121 01111122222111 12111222
Q ss_pred cCCCCcHHHHHHHHHHHHHcCceeEEEcCccc----------------------chhh---cchHHHHHHHHHHHHc-CC
Q 009256 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVN---RAFFPYSQSARLLVSL-GV 513 (539)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g----------------------~v~n---rl~~~~~~Ea~~l~~~-G~ 513 (539)
.+.. + .+.+.++|+..|..+++..|..| +..| .+....+.|+..+++. |+
T Consensus 156 ~g~~-~---~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~ 231 (335)
T 1z82_A 156 LAGE-N---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGA 231 (335)
T ss_dssp EEET-T---HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeh-h---HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCC
Confidence 2211 2 77899999999988877766422 1112 2234566799999976 99
Q ss_pred CHHHH
Q 009256 514 DVFRI 518 (539)
Q Consensus 514 ~~~~i 518 (539)
+++.+
T Consensus 232 ~~~~~ 236 (335)
T 1z82_A 232 DQKTF 236 (335)
T ss_dssp CHHHH
T ss_pred Chhhh
Confidence 88765
No 163
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.20 E-value=3.1e-11 Score=122.09 Aligned_cols=191 Identities=15% Similarity=0.060 Sum_probs=119.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccC--Cc-c
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY-S 383 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~--~~-~ 383 (539)
||+|||+|.||.++|..|+++|++|++||+ ++++++.+.+ .+. .... .. ...+..++ ++ +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~g-~~--~~~~~~~~~~~~~~ 67 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-----------GREHPRLG-VK--LNGVEIFWPEQLEK 67 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-----------TCCBTTTT-BC--CCSEEEECGGGHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHH-----------hCcCcccC-cc--ccceEEecHHhHHH
Confidence 799999999999999999999999999999 8887766532 110 0000 00 01123343 44 5
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCC---C---hHHHhhccCC--CCcEEEeccCCCCC---C
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAH---V 452 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~---~---~~~i~~~~~~--~~r~vg~h~~~p~~---~ 452 (539)
.++++|+||.|+|.+ ....++.++.+ ++++++|++.+.++ + ...+.+.+.. +..........|.. .
T Consensus 68 ~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 144 (335)
T 1txg_A 68 CLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV 144 (335)
T ss_dssp HHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH
T ss_pred HHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH
Confidence 578999999999965 46778888988 88898888877666 2 2344443332 11000011112211 1
Q ss_pred --CCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc----------------------ch-----hhc---chHH
Q 009256 453 --MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FA-----VNR---AFFP 500 (539)
Q Consensus 453 --~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g----------------------~v-----~nr---l~~~ 500 (539)
+....++.+. .+++.++.+.++++..|..+++..|..+ +. .|. +...
T Consensus 145 ~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~ 223 (335)
T 1txg_A 145 AKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATR 223 (335)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 1111122222 2678899999999999988877776421 11 232 2335
Q ss_pred HHHHHHHHHHc-CCCHHHH
Q 009256 501 YSQSARLLVSL-GVDVFRI 518 (539)
Q Consensus 501 ~~~Ea~~l~~~-G~~~~~i 518 (539)
.++|+..+++. |++++++
T Consensus 224 ~~~E~~~la~~~G~~~~~~ 242 (335)
T 1txg_A 224 AINEMAELIEILGGDRETA 242 (335)
T ss_dssp HHHHHHHHHHHHTSCGGGG
T ss_pred HHHHHHHHHHHHCCCcchh
Confidence 56799998877 9877644
No 164
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.17 E-value=4.9e-11 Score=122.81 Aligned_cols=154 Identities=11% Similarity=0.069 Sum_probs=108.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC------CCeEEEEeCChH-HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
++||+|||+|+||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... -....
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~---------d~ta~ 113 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE---------SGTLG 113 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT---------TTCEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe---------cCCCC
Confidence 47899999999999999999999 999987776543 23332 11221100 00012
Q ss_pred Cc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhh---ccCCCCcEEEeccCCCCCC----
Q 009256 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV---- 452 (539)
Q Consensus 381 ~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~---~~~~~~r~vg~h~~~p~~~---- 452 (539)
+. +++++||+||.++|+.. ...++.++.++++++++| +...++.+..+.. ..+....++..+|..|.+.
T Consensus 114 s~aEAa~~ADVVILaVP~~~--~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~ 190 (525)
T 3fr7_A 114 DIWETVSGSDLVLLLISDAA--QADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRL 190 (525)
T ss_dssp EHHHHHHHCSEEEECSCHHH--HHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHH
T ss_pred CHHHHHhcCCEEEECCChHH--HHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHH
Confidence 33 67889999999999544 346788999999999985 6788888876654 3333457999999888764
Q ss_pred ---C-----Ceee--eecCCCCcHHHHHHHHHHHHHcCceeE
Q 009256 453 ---M-----PLLE--IVRTERTSAQVILDLMTVGKIIKKVPV 484 (539)
Q Consensus 453 ---~-----~~ve--i~~~~~t~~e~~~~~~~l~~~lg~~~v 484 (539)
+ ..+. +......+.+..+.+..++..+|...+
T Consensus 191 y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 191 YVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1 1122 333445677899999999999998753
No 165
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.14 E-value=2.6e-10 Score=115.45 Aligned_cols=169 Identities=11% Similarity=0.133 Sum_probs=104.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
++||+|||+|.||+.+|..|+++|++|++|+++ +..+.+.+ .|......-......+..+++.+.+.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQT-----------AGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHH-----------TCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHH-----------CCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 468999999999999999999999999999996 45444321 111000000000012334456655789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC-------------------hH-HHhhccCCCCcEEEe-cc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIGA-HF 446 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~-------------------~~-~i~~~~~~~~r~vg~-h~ 446 (539)
+|+||+|+|. .....+++++.++++++++|++.+.+++ .. .+.+.++ ..++++. -+
T Consensus 71 ~D~Vilavk~--~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVKA--PALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCCH--HHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCCc--hhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 9999999985 3456788888888999999998888853 11 3444443 2344432 21
Q ss_pred C-----CCCC---CCCe-eeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc
Q 009256 447 F-----SPAH---VMPL-LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (539)
Q Consensus 447 ~-----~p~~---~~~~-vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g 491 (539)
. .|-. .... +.+-..+..+.+..+.+.++|...|..+....|..+
T Consensus 148 ~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~ 201 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQR 201 (335)
T ss_dssp CCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHH
T ss_pred EEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHH
Confidence 1 1111 1111 111111223457778899999999988777777554
No 166
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.14 E-value=1.1e-10 Score=117.63 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=87.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+||+|||+|.||.++|..++.+|+ +|++||+++++++.....+.+...... ...+++.+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIG------------SPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHT------------CCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccC------------CCCEEEECCCHHHHCC
Confidence 489999999999999999999999 999999999988865444333322111 0135777778888999
Q ss_pred cCEEEEcc--cC------------ChhHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhhccC--CCCcEEEe
Q 009256 388 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 444 (539)
Q Consensus 388 aDlVi~av--pe------------~~~~~~~~~~~l~~~~~~~~ii--~s~ts~~~~~~i~~~~~--~~~r~vg~ 444 (539)
||+||+++ |. +..+++++++++.+++ |++++ +||.+... ..+..... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 3466889999999998 55554 34443322 23332222 56778776
No 167
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.11 E-value=5.1e-10 Score=112.34 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=108.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
.++||+|||+|.||+.+|..|+++|++|++| ++++.++.+.+.- + .+...... ....+..+++.+.+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g---~--~~~~~~~~------~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATG---L--RLETQSFD------EQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHC---E--EEECSSCE------EEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCC---e--EEEcCCCc------EEEeeeeeCCHHHcC
Confidence 3568999999999999999999999999999 9988877764320 0 00000000 002344456666678
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhhccCCCCcEEEec------cCCCC---CCCCee
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAH------FFSPA---HVMPLL 456 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~-~i~~~~~~~~r~vg~h------~~~p~---~~~~~v 456 (539)
++|+||+|+|.. ..+.+++++.++++++++|++.++++... .+.+.++ .++++.. ...|- +.+...
T Consensus 86 ~~D~vilavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g~ 161 (318)
T 3hwr_A 86 GADLVLFCVKST--DTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRGE 161 (318)
T ss_dssp TCSEEEECCCGG--GHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEcccc--cHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCce
Confidence 999999999965 45788899999999999999999999874 5555554 4444321 11111 111111
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcCccc
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g 491 (539)
..+.. .+..+.+.++|...|..+.+..|..+
T Consensus 162 ~~ig~----~~~~~~l~~~l~~~~~~~~~~~Di~~ 192 (318)
T 3hwr_A 162 LVIEP----TSHGANLAAIFAAAGVPVETSDNVRG 192 (318)
T ss_dssp EEECC----CTTTHHHHHHHHHTTCCEEECSCHHH
T ss_pred EEEcC----CHHHHHHHHHHHhCCCCcEechHHHH
Confidence 11222 23456788888988888777777444
No 168
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.09 E-value=2.2e-10 Score=114.85 Aligned_cols=123 Identities=20% Similarity=0.303 Sum_probs=86.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
++||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+++.+.... ...+++.++++++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY------------SNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT------------CCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC------------CCcEEEECCCHHHhC
Confidence 4689999999999999999999998 999999999988765544433322111 013566667888899
Q ss_pred CcCEEEEcc--cCCh-----------------hHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhhccC--CCCcEEE
Q 009256 387 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 443 (539)
Q Consensus 387 ~aDlVi~av--pe~~-----------------~~~~~~~~~l~~~~~~~~ii--~s~ts~~~~~~i~~~~~--~~~r~vg 443 (539)
+||+||+++ |.++ .+++++++++.+++ |++++ +||.+.+. +.+..... .|.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 5432 36888889999998 55554 34443332 23332223 4667777
Q ss_pred e
Q 009256 444 A 444 (539)
Q Consensus 444 ~ 444 (539)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 6
No 169
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.68 E-value=1e-11 Score=116.11 Aligned_cols=148 Identities=14% Similarity=0.163 Sum_probs=98.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
++|+|||+|.||..++..|.+.|++|++||++++ .+.+.+ .+ +...+..+.++++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~-----------~g-------------~~~~~~~~~~~~a 74 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLP-----------RG-------------AEVLCYSEAASRS 74 (201)
Confidence 4799999999999999999999999999999876 332211 01 1122222667899
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--------HHHhhccCCCCcEEEeccCCCCCCCC-ee---
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL--- 456 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--------~~i~~~~~~~~r~vg~h~~~p~~~~~-~v--- 456 (539)
|+||.++|.+ . .+.++ ++.. ..++++|++.+++++. ..+...++. .+++...++.|..... ..
T Consensus 75 DvVilav~~~-~-~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g 149 (201)
T 2yjz_A 75 DVIVLAVHRE-H-YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDA 149 (201)
Confidence 9999999964 3 33444 4543 3467788888877753 334333332 3454544444443322 11
Q ss_pred ---eeecCCCCcHHHHHHHHHHHHHcCceeEEEcC
Q 009256 457 ---EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (539)
Q Consensus 457 ---ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~ 488 (539)
.++.+. +++.++.++++++.+|..++++++
T Consensus 150 ~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 150 SRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 233332 678899999999999999999876
No 170
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.06 E-value=2.1e-10 Score=115.58 Aligned_cols=123 Identities=21% Similarity=0.256 Sum_probs=86.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc-CC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 385 (539)
.+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+..... + . ..+++.+++++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~-~--------~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D-T--------NVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T-C--------CCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C-C--------CCEEEEeCCHHHHh
Confidence 3589999999999999999999998 99999999988887544444333211 1 0 13567778884 89
Q ss_pred CCcCEEEEcc--cCCh-----------------hHHHHHHHHHHHhCCCCeEEE--ecCCCCChHHHhhccC--CCCcEE
Q 009256 386 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTS--SQDRII 442 (539)
Q Consensus 386 ~~aDlVi~av--pe~~-----------------~~~~~~~~~l~~~~~~~~ii~--s~ts~~~~~~i~~~~~--~~~r~v 442 (539)
++||+||+++ |.++ .+++++++++.+++ |+++++ ||.+++. +.+..... .|.|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999998 7544 34788889999998 556553 4443332 23332222 466777
Q ss_pred Ee
Q 009256 443 GA 444 (539)
Q Consensus 443 g~ 444 (539)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 171
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=99.06 E-value=3e-10 Score=106.48 Aligned_cols=141 Identities=19% Similarity=0.167 Sum_probs=98.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++..+.+.+.+.|..++.++.++.|+|.=. |-|+++. ....++ +.|..+++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~In----SPGG~v~----------------a~~~I~-~~i~~~~~pV~~~v~ 93 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYIN----SPGGSIS----------------AGMAIY-DTMVLAPCDIATYAM 93 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHCSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEC
Confidence 3788999999999999987776777766421 1222221 123455 678899999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCCCcchh------------------hccccccC--HHHHHHHHH
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVG--LSKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~------------------~~l~r~vG--~~~a~~l~l 164 (539)
|.|.++|..++++||. |++.+++.++.....-|. .|-. ..+.+..| .....+++.
T Consensus 94 g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~ 170 (208)
T 2cby_A 94 GMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSD 170 (208)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred cEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHh
Confidence 9999999999999999 999999999987654221 1110 11223333 344667888
Q ss_pred cCCCCCHHHHHHcCCcceecCc-chHHH
Q 009256 165 LSKSITSEEGWKLGLIDAVVTS-EELLK 191 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~-~~l~~ 191 (539)
.|+.++++||+++||||+|.+. +++.+
T Consensus 171 ~~~~~ta~eA~e~GLvD~i~~~~~~ll~ 198 (208)
T 2cby_A 171 RDRWFTAAEALEYGFVDHIITRAHVNGE 198 (208)
T ss_dssp TTCEEEHHHHHHHTSCSEECSCC-----
T ss_pred CCcEEcHHHHHHcCCCcEecCchHHHHH
Confidence 9999999999999999999854 45544
No 172
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.02 E-value=8.8e-10 Score=110.60 Aligned_cols=140 Identities=19% Similarity=0.212 Sum_probs=92.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.||.+++..|+..|+ +|++||+++++++.....+.+... .. . ...+.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~--~----------~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT--R----------RANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS--C----------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc--C----------CcEEEe-CCHHHhC
Confidence 389999999999999999999999 999999999887765443322211 00 0 023333 3567889
Q ss_pred CcCEEEEcccCCh--------------hHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhcc-C-CCCcEEEeccCCC
Q 009256 387 DVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKT-S-SQDRIIGAHFFSP 449 (539)
Q Consensus 387 ~aDlVi~avpe~~--------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~-~-~~~r~vg~h~~~p 449 (539)
+||+||++++... .+++++++++.++++ +++++..+.+... +.+.... . .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~----- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS----- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC-----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcHHHHHHHHHHHhCCChhhEEee-----
Confidence 9999999998532 356788888988874 5544433322222 2232222 2 45677775
Q ss_pred CCCCCeeeeecCCCCcHHHHHHHHHHHHHcCc
Q 009256 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481 (539)
Q Consensus 450 ~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~ 481 (539)
.|..+.......+.+.+|.
T Consensus 141 -------------~t~ld~~r~~~~la~~lgv 159 (319)
T 1a5z_A 141 -------------GTVLDTARLRTLIAQHCGF 159 (319)
T ss_dssp -------------TTHHHHHHHHHHHHHHHTC
T ss_pred -------------CccHHHHHHHHHHHHHhCc
Confidence 3455666666667777774
No 173
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.99 E-value=4.6e-09 Score=105.06 Aligned_cols=165 Identities=13% Similarity=0.050 Sum_probs=104.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+||+|||+|.||+.+|..|+++|++|++|+|++ .+...+ .|.. ........+..+..+++.+.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~-----------~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAG-----------NGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHH-----------TCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHh-----------CCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 489999999999999999999999999999986 233321 1110 00000000001333455555789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhccCCCCcEEEec------cCCCC---CCCCe-e
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPA---HVMPL-L 456 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~~~~~r~vg~h------~~~p~---~~~~~-v 456 (539)
+|+||.++|... ...+++++.++++++++|++...++.. ..+.+.++. .++++.. ...|- +.++. +
T Consensus 70 ~D~vilavk~~~--~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLKTFA--NSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCCGGG--GGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecCCCC--cHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998443 557889999999999999999999874 455555543 2443332 11111 11111 1
Q ss_pred eeecCCCCcHHHHHHHHHHHHHcCceeEEEcCc
Q 009256 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (539)
Q Consensus 457 ei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~ 489 (539)
.+-..+..+.+..+.+.++|...|.......|.
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di 179 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDL 179 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHH
Confidence 122223335677788999999988887766664
No 174
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.98 E-value=6.1e-10 Score=110.54 Aligned_cols=122 Identities=21% Similarity=0.271 Sum_probs=80.9
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 009256 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (539)
Q Consensus 304 ~~~~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (539)
..++++||+|||+|.||..+|..++.+|+ +|+++|++++....+.+ +.. .. . .+++.+++
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~d-l~~-----~~-~-----------~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMD-LEI-----FN-L-----------PNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHH-HHH-----HT-C-----------TTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHH-Hhh-----hc-C-----------CCeEEeCC
Confidence 34556899999999999999999999999 99999999863222221 111 00 0 24666678
Q ss_pred ccCCCCcCEEEEcc-------------cCChhHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhhccC-CCCcEEEe
Q 009256 382 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS-SQDRIIGA 444 (539)
Q Consensus 382 ~~~~~~aDlVi~av-------------pe~~~~~~~~~~~l~~~~~~~~ii--~s~ts~~~~~~i~~~~~-~~~r~vg~ 444 (539)
++++++||+||+++ .++..+++++++++.+++ |++++ +||...+....+..... .|.|++|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 88899999999997 788889999999999998 55554 34432211112222222 25688887
No 175
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.88 E-value=8.7e-09 Score=103.44 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=104.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHH-hhHhcCCCCHHHHHHHhhcccccCCccCC-C
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR-GLVTRGKLTQDKANNALKMLKGVLDYSEF-K 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 386 (539)
+||+|||+|.||+.+|..|+++|++|++|+|++. +.+.+. .+. .....+... +..+..+++.+.+ +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~---Gl~~~~~~~g~~~-------~~~~~~~~~~~~~~~ 70 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAK---GIRIRSATLGDYT-------FRPAAVVRSAAELET 70 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHH---CEEEEETTTCCEE-------ECCSCEESCGGGCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhC---CcEEeecCCCcEE-------EeeeeeECCHHHcCC
Confidence 4899999999999999999999999999999862 333211 000 000001000 0013344566444 4
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhccCCCCcEEEec-cC-----CCCC---CCCe-
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH-FF-----SPAH---VMPL- 455 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~~~~~r~vg~h-~~-----~p~~---~~~~- 455 (539)
++|+||.|+|... ...+++++.++++++++|++...++.. ..+++.++.. ++++.. +. .|-. ..+.
T Consensus 71 ~~DlVilavK~~~--~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~~~ 147 (320)
T 3i83_A 71 KPDCTLLCIKVVE--GADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAYGR 147 (320)
T ss_dssp CCSEEEECCCCCT--TCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEecCCCC--hHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCCCE
Confidence 8999999998654 346788899999999988888888874 5566655533 444332 21 1111 1111
Q ss_pred eeeecCCCCcHHHHHHHHHHHHHcCceeEEEcCcc
Q 009256 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490 (539)
Q Consensus 456 vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~ 490 (539)
+.+-..+..+.+..+.+.++|...|..+.+..|..
T Consensus 148 ~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~ 182 (320)
T 3i83_A 148 LMLGNYPGGVSERVKTLAAAFEEAGIDGIATENIT 182 (320)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHH
T ss_pred EEEecCCCCccHHHHHHHHHHHhCCCCceECHHHH
Confidence 11111123345677889999999888877776644
No 176
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.87 E-value=3.5e-09 Score=105.65 Aligned_cols=121 Identities=15% Similarity=0.235 Sum_probs=81.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+||+|||+|.||.+++..++..|+ +|+++|+++++++.....+.+.... .....+++.+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~------------~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI------------EGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHH------------HTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhh------------cCCCeEEEECCCHHHHCC
Confidence 589999999999999999999997 9999999998776433222211100 000134666677888999
Q ss_pred cCEEEEcc--------------cCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhc----c-CCCCcEEEe
Q 009256 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK----T-SSQDRIIGA 444 (539)
Q Consensus 388 aDlVi~av--------------pe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~----~-~~~~r~vg~ 444 (539)
||+||+++ .++..+++++++.+.++. ++++++..| .|+..+... . -.|.|++|+
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t--NPv~~~t~~~~~~~~~~~~rviG~ 143 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVN--NPLDAMTYLAAEVSGFPKERVIGQ 143 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC--CchHHHHHHHHHHcCCCHHHEEEC
Confidence 99999997 334567778888898887 566554322 344332221 1 134577776
No 177
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.85 E-value=2.5e-09 Score=106.54 Aligned_cols=119 Identities=20% Similarity=0.299 Sum_probs=78.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccCCccCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
+||+|||+|.||.++|..++.+|+ +|++||+++++++.....+ .... .. ...+++. ++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l--------~~~~~~~------~~~~i~~-~~~~a~ 65 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI--------AHAAPVS------HGTRVWH-GGHSEL 65 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--------TTSCCTT------SCCEEEE-ECGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh--------hhhhhhc------CCeEEEE-CCHHHh
Confidence 389999999999999999999999 9999999987665422211 1110 00 0012332 456889
Q ss_pred CCcCEEEEccc--C------------ChhHHHHHHHHHHHhCCCCeEEE--ecCCCCChHHHhhccCCCCcEEEe
Q 009256 386 KDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 444 (539)
Q Consensus 386 ~~aDlVi~avp--e------------~~~~~~~~~~~l~~~~~~~~ii~--s~ts~~~~~~i~~~~~~~~r~vg~ 444 (539)
++||+||++++ . +..+++.+++++.++. ++++++ +|........+++.. .|+|++|+
T Consensus 66 ~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 66 ADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 99999999983 2 3446788888999986 566554 333332222233333 66788776
No 178
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.84 E-value=1.7e-09 Score=109.59 Aligned_cols=117 Identities=14% Similarity=-0.000 Sum_probs=82.4
Q ss_pred ceEEEEcCCCCcHHHHHHHH-HCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~-~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||.++|..+. ..|++|++||++++..+...+ . .+...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------L-------------GAERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------H-------------TCEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------c-------------CcEEeCCHHHHhc
Confidence 48999999999999999999 899999999998765443211 0 12223344 5578
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhhccCCC-CcEEEeccCCC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 449 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~--~~~~~i~~~~~~~-~r~vg~h~~~p 449 (539)
+||+|++++|.+.+.+..+.+++.+.++++++++..+++ .....+...+... -...|+++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987766554445666789999988865555 3334565555432 12357788773
No 179
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.81 E-value=1.8e-09 Score=108.76 Aligned_cols=117 Identities=13% Similarity=0.055 Sum_probs=80.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..+|..+...|++|++||++++..+... +.+ +... ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 4899999999999999999999999999999876544321 111 2222 44 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhhccCC-CCcEEEeccCCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFSPA 450 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~--~~~~~i~~~~~~-~~r~vg~h~~~p~ 450 (539)
||+|++++|.+.+.+..+.+++.+.+++++++++.+++ .....+...+.. .-...++++|.+.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999987654444335666788999988765555 333455544432 2234678877653
No 180
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.79 E-value=1.8e-08 Score=100.53 Aligned_cols=122 Identities=18% Similarity=0.252 Sum_probs=79.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCccC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~ 384 (539)
|+||+|||+|.||.++|..|+.+| ++|++||+++++++.....+.+... ..+ ..+.. ++++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~ 66 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAA 66 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHH
Confidence 358999999999999999999999 7999999999887766443321110 000 11222 345678
Q ss_pred CCCcCEEEEcccCChh------------------HHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhhcc--CCCCcEEE
Q 009256 385 FKDVDMVIEAVIESVP------------------LKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKT--SSQDRIIG 443 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~------------------~~~~~~~~l~~~~~~~~ii~s~ts~~~~-~~i~~~~--~~~~r~vg 443 (539)
+++||+||++++.... +++.+++++.++.+ +++++..+.+..+ ..+.... -.+.+++|
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rvig 145 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVDVITALFQHVTGFPAHKVIG 145 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHHHHHHHHHHhcCCCHHHEee
Confidence 8999999999986442 35677888888775 5555433333222 1222221 23567777
Q ss_pred e
Q 009256 444 A 444 (539)
Q Consensus 444 ~ 444 (539)
+
T Consensus 146 ~ 146 (309)
T 1hyh_A 146 T 146 (309)
T ss_dssp C
T ss_pred c
Confidence 6
No 181
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.76 E-value=1.5e-08 Score=100.84 Aligned_cols=120 Identities=12% Similarity=0.205 Sum_probs=80.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
||+|||+|.||.+++..++..|+ +|+++|+++++++.....+.+.... .... .+++.+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~~~~-----------~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-LGVD-----------IRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-HTCC-----------CCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-cCCC-----------eEEEECCCHHHhCCC
Confidence 69999999999999999998888 7999999998876543333221110 0001 235555678899999
Q ss_pred CEEEEcc--------------cCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhcc----C-CCCcEEEe
Q 009256 389 DMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 444 (539)
Q Consensus 389 DlVi~av--------------pe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~----~-~~~r~vg~ 444 (539)
|+||++. ..+..+++++.+++.+++ |+++++..| .|+..+.... . .|.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t--NPv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITT--NPVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeC--CchHHHHHHHHHhcCCChhhEEEe
Confidence 9999994 345567888888999987 555443322 2554333322 1 24567765
No 182
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.75 E-value=3.1e-08 Score=98.64 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=72.3
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 304 ~~~~~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
|.+..+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.... .... ...++..++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~-~~~~-----------~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS-PVQG-----------FDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH-HHHT-----------CCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh-hhcc-----------CCCEEEEcC
Confidence 44456799999999999999999999999 99999999 444443322222111 0010 113466667
Q ss_pred CccCCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 381 DYSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 381 ~~~~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+++++++||+||++... +..+.+.+.+.+.++.+ +++++..+
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvvs 127 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVLT 127 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECC
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEECC
Confidence 78999999999999732 22355666677888875 55554333
No 183
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.74 E-value=2.9e-08 Score=99.23 Aligned_cols=104 Identities=20% Similarity=0.267 Sum_probs=72.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
.++||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+... ..... ..+..+++++++
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~~~-----------~~v~~t~d~~a~ 73 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSP-VDGFD-----------AKFTGANDYAAI 73 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHTCC-----------CCEEEESSGGGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhh-hcCCC-----------CEEEEeCCHHHH
Confidence 45699999999999999999999999 999999999887644333322211 01101 245556778999
Q ss_pred CCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 386 ~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++||+||.+... +..+.+.+.+.+.++. |+++++..+
T Consensus 74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvt 124 (324)
T 3gvi_A 74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICIT 124 (324)
T ss_dssp TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecC
Confidence 999999998631 2344556667788887 555554334
No 184
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.74 E-value=2e-08 Score=102.22 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=73.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcc-cccCCc-cCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 385 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~ 385 (539)
++||+|||+|.||..+|..|+++|++|++||++++.++.+.+... -.+.....+ ....+ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA----IIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS----EEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCC----eEEeccccc------cccccceecCCHHHHH
Confidence 358999999999999999999999999999999988776643200 000000000 00112 234455 457
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
.++|+||+|+|.+.. ..+++++.+.++++++|++..
T Consensus 74 ~~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~~ 109 (359)
T 1bg6_A 74 KDADVILIVVPAIHH--ASIAANIASYISEGQLIILNP 109 (359)
T ss_dssp TTCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESS
T ss_pred hcCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEcC
Confidence 899999999996653 678888999999999777663
No 185
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.74 E-value=4.4e-08 Score=97.74 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=68.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.||.++|..|+.+ |++|++||+++++++.....+.+.... . . ...++..++++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~-~--~---------~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-G--L---------FDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-H--T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhc-c--c---------CCcEEEECCCHHHHC
Confidence 3899999999999999999985 799999999998877543222111100 0 0 013466667786699
Q ss_pred CcCEEEEcccCC--------------hhHHHHHHHHHHHhCCCCeEE
Q 009256 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCIL 419 (539)
Q Consensus 387 ~aDlVi~avpe~--------------~~~~~~~~~~l~~~~~~~~ii 419 (539)
+||+||+++|.. ..+.+.+.+.+.++.++..++
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~vi 115 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 999999999642 134456677788886544433
No 186
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.73 E-value=3.1e-09 Score=107.15 Aligned_cols=114 Identities=16% Similarity=0.072 Sum_probs=80.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..+|..+...|++|++||++++. +...+ .| +.. .++ +.+++
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~-----------~g-------------~~~-~~l~~~l~~ 204 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERE-----------LN-------------AEF-KPLEDLLRE 204 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-----------HC-------------CEE-CCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhh-----------cC-------------ccc-CCHHHHHhh
Confidence 58999999999999999999999999999999876 32211 01 122 244 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccCC-CCcEEEeccCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~-~~r~vg~h~~~ 448 (539)
||+|++++|.+.+.+..+.+++.+.+++++++++.+.+..+. .+...+.. .-...++++|+
T Consensus 205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~ 268 (334)
T 2dbq_A 205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFE 268 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCC
Confidence 999999999877654433356677889999887666554443 44444432 22346788876
No 187
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.72 E-value=5.7e-09 Score=105.12 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=78.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++. +...+ .| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-----------~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-----------LK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-----------cC-------------ceec-CHHHHHhh
Confidence 48999999999999999999999999999999875 32211 01 1222 44 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccCC-CCcEEEeccCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~-~~r~vg~h~~~ 448 (539)
||+|++++|.+.+.+..+-+++.+.++++ ++++.+.+..+. .+...+.. .-...|+++|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999987655544444566778889 777655554443 34444433 23457888877
No 188
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.70 E-value=6.2e-08 Score=97.11 Aligned_cols=123 Identities=26% Similarity=0.376 Sum_probs=79.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
++||+|||+|.||..++..|+.+|+ +|+++|+++++++.....+.+.+ ... + ...+..+++.+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~~--~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SFY--P----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGS--T----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh-hhc--C----------CeEEEeCCCHHHh
Confidence 3589999999999999999999999 99999999877653211111111 000 0 0234444466788
Q ss_pred CCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH-Hhhc--cCCCCcEEEe
Q 009256 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNI-VGEK--TSSQDRIIGA 444 (539)
Q Consensus 386 ~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~-i~~~--~~~~~r~vg~ 444 (539)
++||+||+++.. +..+++.+++.+.++ .++++|++.+.++.... +... .-.+.+++|.
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~ 148 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGLPENQIFGS 148 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEEC
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCCCHHHEeec
Confidence 999999999932 124556778888887 56777776665554432 2221 1123467665
No 189
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.70 E-value=2.4e-08 Score=99.77 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=71.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
.++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+++.... .... ..+..+++++++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~-~~~~-----------~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI-EGVD-----------FKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH-HTCC-----------CCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh-cCCC-----------cEEEEcCCHHHH
Confidence 35699999999999999999999998 9999999998876443332211100 0000 234445677999
Q ss_pred CCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEec
Q 009256 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (539)
Q Consensus 386 ~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~ 422 (539)
++||+||.+.+. +..+.+.+.+.+.++. |+++++..
T Consensus 72 ~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv 121 (321)
T 3p7m_A 72 ENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI 121 (321)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe
Confidence 999999998632 3345566667788888 55555433
No 190
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.67 E-value=4.4e-09 Score=105.70 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=79.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++..+ + .....++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 4799999999999999999999999999999875311 1 1123344 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccCC-CCcEEEeccCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS 448 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~-~~r~vg~h~~~ 448 (539)
||+|++++|.+.+.+..+-+++.+.+++++++++.+++..+ ..+...+.. .-+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999987655443334555677899988866665444 355554432 23566788776
No 191
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.66 E-value=5.6e-08 Score=96.90 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=75.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (539)
+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .. ...++..++++++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~----~~---------~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL----FL---------HTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG----GS---------CCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh----cc---------cCCeEEEcCCHHH
Confidence 56799999999999999999999997 999999999887765444433211 00 0135666778888
Q ss_pred CCCcCEEEEcc--------------cCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 385 FKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 385 ~~~aDlVi~av--------------pe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+++||+||++. ..+..+++.+.+++.++. |+++++..+
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvt 138 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHP 138 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCC
Confidence 99999999875 234567778888899995 555554333
No 192
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.65 E-value=2.8e-08 Score=103.05 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=74.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCeEEEEe---CChHHHHHHHHHHHHHHHhhHhcC------CCCHHHHHHHhhccc-
Q 009256 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRG------KLTQDKANNALKMLK- 377 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~-~G~~V~~~d---~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~i~- 377 (539)
+||+|||+|.||..+|..|++ +|++|++|| ++++.++.+.+ +.+ ....... ....++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~~~~~-~~~~~~~~ 71 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKDGTQT-EVKSRPKV 71 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSSSCEE-EEEECCSE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCCCccc-eeeccceE
Confidence 589999999999999999988 599999999 87776665321 111 0000000 0001233
Q ss_pred ccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 378 ~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
.++++ +++.+||+||+|+|... ...+++++.++++++++|++++++..
T Consensus 72 ~~~~~~~a~~~aD~Vilav~~~~--~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVPAFA--HEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp EESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred EeCCHHHHhCCCCEEEEeCchHH--HHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 45566 56789999999999655 67889999999999999988554443
No 193
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.62 E-value=1.7e-08 Score=108.08 Aligned_cols=149 Identities=14% Similarity=0.133 Sum_probs=96.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||+++.. +.+.+ .| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQ-----------LG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHH-----------HT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHh-----------cC-------------cEEc-CHHHHHhc
Confidence 58999999999999999999999999999998642 22211 11 1112 34 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH--HhhccCCC-CcEEEeccCC--CC-----CCCCeee
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQ-DRIIGAHFFS--PA-----HVMPLLE 457 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~--i~~~~~~~-~r~vg~h~~~--p~-----~~~~~ve 457 (539)
||+|+.++|.+.+....+-+++.+.+++++++++.+.+..+.+ +...+... -...+..+|. |+ ...+.+.
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 9999999997655443333346678999999987776655543 33443221 0111233322 11 2234566
Q ss_pred eecCCC-CcHHHHHH-----HHHHHHHcCcee
Q 009256 458 IVRTER-TSAQVILD-----LMTVGKIIKKVP 483 (539)
Q Consensus 458 i~~~~~-t~~e~~~~-----~~~l~~~lg~~~ 483 (539)
++|+.. +++++.++ +..+...++..+
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 778776 77887775 666777776544
No 194
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.61 E-value=8.8e-09 Score=101.24 Aligned_cols=124 Identities=10% Similarity=-0.029 Sum_probs=84.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++..+. ....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 58999999999999999999999999999998653211 1223344 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccC-CCCcEEEeccCC-----CCCCCCeeeee
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS-----PAHVMPLLEIV 459 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~-~~~r~vg~h~~~-----p~~~~~~vei~ 459 (539)
||+|+.++|...+....+-++..+.++++++++..+.+..+ ..+...+. ..-...++..|. |-+..+.+.+.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 99999999976665544446677889999998866655433 34444332 222344555443 33344555666
Q ss_pred cC
Q 009256 460 RT 461 (539)
Q Consensus 460 ~~ 461 (539)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 195
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.60 E-value=5.5e-09 Score=106.50 Aligned_cols=110 Identities=22% Similarity=0.173 Sum_probs=80.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--------eEEEEeCChHHHHH-HHHHHHHH--HHhhHhcCCCCHHHHHHHhhcc
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEAN--VRGLVTRGKLTQDKANNALKML 376 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~--------~V~~~d~~~~~~~~-~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~i 376 (539)
..||+|||+|.||+++|..|+++|+ +|++|.++++...+ ..+.++.. -.+++..-.++ .++
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--------~~i 105 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--------DNL 105 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--------SSE
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--------CCc
Confidence 3489999999999999999999875 59999998763211 11111100 00111111122 467
Q ss_pred cccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 377 KGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 377 ~~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
.+++|+ +++++||+||.++| .+..+.+++++.++++++.++++.+.++.
T Consensus 106 ~~t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 106 VANPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp EEESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred EEeCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 888888 77999999999999 66688999999999999999998888875
No 196
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.60 E-value=6.2e-08 Score=96.94 Aligned_cols=141 Identities=11% Similarity=0.038 Sum_probs=86.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||.++|..+...|++|++||+ +++.. ...+ .| +....++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~-----------~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEAS-----------YQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHH-----------HT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhh-----------cC-------------cEEcCCHHHHHh
Confidence 4899999999999999999999999999999 87652 2111 11 1223244 5678
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhhccCCC-CcEEEeccC--CCC-----CCCCee
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQ-DRIIGAHFF--SPA-----HVMPLL 456 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~--~~~~i~~~~~~~-~r~vg~h~~--~p~-----~~~~~v 456 (539)
+||+|+.++|.+.+....+-++..+.++++++++..+++- ....+...+... -.-.++.+| .|+ +..+.+
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nv 281 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNT 281 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTE
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCE
Confidence 9999999999766543333245667889999988766653 333444444321 111234443 222 223445
Q ss_pred eeecCCCC-cHHHHHHHHH
Q 009256 457 EIVRTERT-SAQVILDLMT 474 (539)
Q Consensus 457 ei~~~~~t-~~e~~~~~~~ 474 (539)
.++|+... +.++.+++..
T Consensus 282 iltPH~~~~t~~~~~~~~~ 300 (320)
T 1gdh_A 282 FLFPHIGSAATQAREDMAH 300 (320)
T ss_dssp EECSSCTTCBHHHHHHHHH
T ss_pred EECCcCCcCcHHHHHHHHH
Confidence 56665432 4444444433
No 197
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.59 E-value=8.6e-08 Score=95.84 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=67.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (539)
.++||+|||+|.||.+++..++..|. +|+++|+++++++.....+.+. ...-..+ -++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~----~~~~~~~--------~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG----KVFAPKP--------VDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH----TTSSSSC--------CEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH----hhhcCCC--------eEEE-cCcHHH
Confidence 35699999999999999999998875 8999999987555432222211 1000000 1222 234588
Q ss_pred CCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeE
Q 009256 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCI 418 (539)
Q Consensus 385 ~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~i 418 (539)
+++||+||++++. +..+++++.+.+.+++++..+
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~ 119 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLF 119 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEE
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEE
Confidence 9999999999542 346788888889998754433
No 198
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.58 E-value=1.6e-07 Score=92.55 Aligned_cols=102 Identities=18% Similarity=0.269 Sum_probs=69.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+....+ ... ..+..++++++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~-~~~-----------~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI-DKY-----------PKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT-TCC-----------CEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc-CCC-----------CEEEEeCCHHHhC
Confidence 489999999999999999999998 99999999988764322222221100 000 2455566788999
Q ss_pred CcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 387 ~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+||+||.+... +..+.+.+.+.+.++. |+++++..+
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs 118 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC
Confidence 99999998742 1233445556677775 555555444
No 199
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.58 E-value=1.9e-07 Score=97.80 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=56.3
Q ss_pred ceEEEEcCCCC--cHHHHHHHHHC----CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGGGLM--GSGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~m--G~~iA~~l~~~----G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+||+|||+|.| |.+++..|+.. |++|++||+++++++....... .++...... .+++.++|+
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~----~~l~~~~~~--------~~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAK----KYVEEVGAD--------LKFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHH----HHHHHTTCC--------CEEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHH----HHhccCCCC--------cEEEEECCH
Confidence 58999999997 56667788754 8999999999998887544332 222211111 467778888
Q ss_pred -cCCCCcCEEEEccc
Q 009256 383 -SEFKDVDMVIEAVI 396 (539)
Q Consensus 383 -~~~~~aDlVi~avp 396 (539)
+++++||+||++++
T Consensus 72 ~eal~dAD~VIiaag 86 (480)
T 1obb_A 72 DDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 78999999999995
No 200
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.56 E-value=2.3e-07 Score=92.47 Aligned_cols=110 Identities=20% Similarity=0.114 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
+||+|||+|.||+.+|..|+ +|++|++|+|+++.++.+.+. .+. ....+. . ....+ ..+.+...++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~---G~~-~~~~~~----~---~~~~~--~~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSE---GIR-LYKGGE----E---FRADC--SADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH---CEE-EEETTE----E---EEECC--EEESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhC---Cce-EecCCC----e---ecccc--cccccccCCC
Confidence 48999999999999999999 999999999999877765431 000 000000 0 00001 1112456789
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhhccC
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTS 436 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~-~i~~~~~ 436 (539)
|+||.|++ ......+++.+.+. ++++ |++...++... .+.+.++
T Consensus 69 D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~ 113 (307)
T 3ego_A 69 DLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHV 113 (307)
T ss_dssp SEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCC
T ss_pred CEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCC
Confidence 99999997 44456777777654 6677 77888898876 4444443
No 201
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.56 E-value=2.4e-07 Score=86.86 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++..+.+.+.+.|..++.++. +.|+|.=. |-|+++. ....++ +.|..+++||++.+.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~IN----SPGGsv~----------------a~~~I~-~~i~~~~~pV~t~v~ 104 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYIN----SPGGSIN----------------EGLAIL-DIFNYIKSDIQTISF 104 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 3778888999999988876555 66666421 1122221 123455 678899999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCC---Ccchhh------------ccccc--cCHHHHHHHHHcCC
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GFGGTQ------------RLPRL--VGLSKAIEMMLLSK 167 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p---~~g~~~------------~l~r~--vG~~~a~~l~l~g~ 167 (539)
|.|..+|.-++++||. |++.+++.+++.....|... +..... .+.+. .......+++-.+.
T Consensus 105 g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~ 184 (215)
T 2f6i_A 105 GLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDY 184 (215)
T ss_dssp EEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred eEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCe
Confidence 9999999999999999 99999999987654332110 000000 00111 12344455555556
Q ss_pred CCCHHHHHHcCCcceecCc
Q 009256 168 SITSEEGWKLGLIDAVVTS 186 (539)
Q Consensus 168 ~~~a~eA~~~Glv~~vv~~ 186 (539)
.++++||+++||||+|.+.
T Consensus 185 ~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 185 YMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp EECHHHHHHHTSCSEECCC
T ss_pred ecCHHHHHHCCCCCEecCC
Confidence 6799999999999999854
No 202
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.52 E-value=3.7e-07 Score=84.61 Aligned_cols=137 Identities=21% Similarity=0.219 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++..+.+.+.+.|..++.++..+.|+|.=. |-|+++. ....++ +.|..+++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------~~~~I~-~~i~~~~~~V~t~~~ 93 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYIN----SPGGSVT----------------AGFAIY-DTIQHIKPDVQTICI 93 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEe----CCCCCHH----------------HHHHHH-HHHHHhcCCcEEEEe
Confidence 4889999999999999987766666666321 1222221 123455 668899999999999
Q ss_pred CccccchhHhhhccC--EEEeeCCceEeCCcccCCCCCCcchhh------------------cccccc--CHHHHHHHHH
Q 009256 107 GLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLV--GLSKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~~------------------~l~r~v--G~~~a~~l~l 164 (539)
|.|.++|..|+++|| .|++.++++|......-|. .|-.. .+.+.- ......+++-
T Consensus 94 G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~ 170 (203)
T 3qwd_A 94 GMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA---QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTD 170 (203)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSST---TTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHT
T ss_pred eeehhHHHHHHHcCCcCeEEEcCCceEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 999999999999999 6999999999876543221 11110 011111 2345566666
Q ss_pred cCCCCCHHHHHHcCCcceecCcc
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSE 187 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~ 187 (539)
....++|+||+++||||+|+...
T Consensus 171 ~d~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 171 RDNFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp SCCCEEHHHHHHHTSCSEECCCC
T ss_pred cCceecHHHHHHcCCcCEecCCc
Confidence 67889999999999999998665
No 203
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.52 E-value=2.5e-08 Score=98.82 Aligned_cols=185 Identities=12% Similarity=0.041 Sum_probs=113.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC-CC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 387 (539)
+||+|||+|.||+.+|..|+++|++|++|+|+++.++.. ...|... ..+. .++.+.+ .+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~-----------~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYY-----------TVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEE-----------SSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEE-----------ecCCeec--------ccee-cCchHhcCCC
Confidence 489999999999999999999999999999996542210 0111100 0111 1222444 88
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEec------cCCCCCCC-Ceeeeec
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH------FFSPAHVM-PLLEIVR 460 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h------~~~p~~~~-~~vei~~ 460 (539)
+|+||.|++ ......+++++.++++++++|++...++...+. ++. .++++.. ...|-..- ....+..
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~~-~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IPF-KNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CCC-SCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CCC-CcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 445678888899999999999998888877654 322 2333321 11111100 0001111
Q ss_pred CCCCcHHHHHHHHHHHHHcCceeEEEcCccc-----chhh-----------------------cchHHHHHHHHHHHHc-
Q 009256 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVN-----------------------RAFFPYSQSARLLVSL- 511 (539)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g-----~v~n-----------------------rl~~~~~~Ea~~l~~~- 511 (539)
+ +.+..+.+.++|..-|....+..|..+ ++.| .++...+.|+..+++.
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~ 213 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAE 213 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHT
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHc
Confidence 1 245667777777777777766666443 1222 1122445587777755
Q ss_pred CC--CHHHHHHHH
Q 009256 512 GV--DVFRIDSAI 522 (539)
Q Consensus 512 G~--~~~~id~a~ 522 (539)
|+ +++.+++.+
T Consensus 214 G~~l~~~~~~~~~ 226 (294)
T 3g17_A 214 GLNFSEQTVDTIM 226 (294)
T ss_dssp TCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 76 566666665
No 204
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.48 E-value=2.4e-07 Score=91.81 Aligned_cols=125 Identities=10% Similarity=0.009 Sum_probs=82.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++ +. + .....++ +.++.
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 4899999999999999999999999999999864 10 0 0112234 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC-CCCcEEEeccC---CCC------CCCCe
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF---SPA------HVMPL 455 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~-~~~r~vg~h~~---~p~------~~~~~ 455 (539)
||+|+.++|.+.+.+..+-++..+.++++++++..+++-.+. .+...+. ..-.-.+...| .|. +..+.
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~n 254 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPN 254 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTT
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCC
Confidence 999999999776544333346777899999988666553333 3444332 12233566655 332 12344
Q ss_pred eeeecCCC
Q 009256 456 LEIVRTER 463 (539)
Q Consensus 456 vei~~~~~ 463 (539)
+.++|+..
T Consensus 255 viltPH~~ 262 (303)
T 1qp8_A 255 VVATPWVA 262 (303)
T ss_dssp EEECCSCS
T ss_pred EEECCCcC
Confidence 55666644
No 205
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.47 E-value=1.9e-07 Score=86.32 Aligned_cols=136 Identities=17% Similarity=0.159 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++..+.+.+.+.|..++.++..+.|+|.=. |-|+++. ....++ +.|..+++||++.+.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------a~~~I~-~~i~~~~~pV~~~v~ 92 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYIN----SPGGVIT----------------AGMSIY-DTMQFIKPDVSTICM 92 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CcCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 3788899999999999887766777777421 1222221 123455 678899999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCCCcchh-h-----------------ccccccC--HHHHHHHHH
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRLVG--LSKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~-~-----------------~l~r~vG--~~~a~~l~l 164 (539)
|.|..+|.-++++||. |++.+++.++......|. .|-. . .+.+.-| .....+++-
T Consensus 93 g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~ 169 (193)
T 1yg6_A 93 GQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 169 (193)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTS
T ss_pred eeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 9999999999999999 999999998765543221 1110 0 0112222 334445554
Q ss_pred cCCCCCHHHHHHcCCcceecCc
Q 009256 165 LSKSITSEEGWKLGLIDAVVTS 186 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~ 186 (539)
.+..++++||+++||||+|.++
T Consensus 170 ~~~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 170 RDRFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp SCEEEEHHHHHHHTSSSEECCC
T ss_pred CCeEEcHHHHHHcCCCCEecCC
Confidence 5667799999999999999864
No 206
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.47 E-value=2.7e-07 Score=91.75 Aligned_cols=93 Identities=19% Similarity=0.118 Sum_probs=67.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++. +... +.| +... ++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKFV-DLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------cccc-CHHHHHhh
Confidence 48999999999999999999999999999999865 2221 111 1111 33 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
||+|+.++|.+.+.+..+-++..+.++++++++..+++-.
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPV 236 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence 9999999997665443222456677899999886666533
No 207
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.46 E-value=3.9e-07 Score=91.07 Aligned_cols=103 Identities=27% Similarity=0.340 Sum_probs=69.2
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc-ccCCc
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~ 382 (539)
+..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+++.. .... ..+. .++++
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~-~~~~-------------~~v~i~~~~~ 68 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGK-AFAP-------------QPVKTSYGTY 68 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTG-GGSS-------------SCCEEEEECG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcc-cccc-------------CCeEEEeCcH
Confidence 345799999999999999999999997 99999999988776544433221 0000 0112 24456
Q ss_pred cCCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 383 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 383 ~~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+++++||+||.++.. +..+.+.+.+.+.++.+ +++++..+
T Consensus 69 ~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvt 122 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVAT 122 (326)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcC
Confidence 889999999998742 11334455566777765 55554434
No 208
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.45 E-value=3.8e-07 Score=90.70 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=67.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.||.++|..++..|+ +|+++|+++++++....++++.... .... ..+..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-~~~~-----------~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-HGFD-----------TRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-HTCC-----------CEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-cCCC-----------cEEEECCCHHHhC
Confidence 489999999999999999999887 9999999998766543333222110 0000 1233346679999
Q ss_pred CcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 387 ~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+||+||.+.+. +..+.+.+.+.+.++. |+++++..+
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt 118 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVA 118 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecC
Confidence 99999998743 1233445555677775 455554434
No 209
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.45 E-value=6e-07 Score=94.09 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=79.3
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+||+|||+|.+ |.++|..|+.. +.+|++||+++++++...+ +...+...... ..+++.++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~-~~~~~l~~~~~-----------~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAG-ACDVFIREKAP-----------DIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHH-HHHHHHHHHCT-----------TSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHH-HHHHHhccCCC-----------CCEEEEECCH
Confidence 48999999998 55578888887 6799999999998877543 22222111111 1357777887
Q ss_pred -cCCCCcCEEEEcccCCh----------------------------------hHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 383 -SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 383 -~~~~~aDlVi~avpe~~----------------------------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
+++++||+||.++|... .+..++.+++.++++ +++++..|....
T Consensus 97 ~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P-~A~ii~~TNPvd 175 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP-DAWMLNYSNPAA 175 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSCHH
T ss_pred HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCC-CeEEEEeCCcHH
Confidence 88999999999997521 235566677888874 555554443333
Q ss_pred hH-HHhhccCCCCcEEEe
Q 009256 428 LN-IVGEKTSSQDRIIGA 444 (539)
Q Consensus 428 ~~-~i~~~~~~~~r~vg~ 444 (539)
+- ..........|++|+
T Consensus 176 i~T~~~~k~~p~~rViG~ 193 (472)
T 1u8x_X 176 IVAEATRRLRPNSKILNI 193 (472)
T ss_dssp HHHHHHHHHSTTCCEEEC
T ss_pred HHHHHHHHhCCCCCEEEe
Confidence 21 222222333477775
No 210
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.44 E-value=1e-07 Score=95.67 Aligned_cols=111 Identities=16% Similarity=0.096 Sum_probs=67.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++.. .......++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----------------------------~~~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----------------------------VDWIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----------------------------SCCEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----------------------------cCceecCCHHHHHhc
Confidence 589999999999999999999999999999987530 011223344 66889
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccCCC-CcEEEeccCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSSQ-DRIIGAHFFS 448 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~~-~r~vg~h~~~ 448 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+. .+...+... -...++..|.
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~ 286 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFV 286 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcC
Confidence 999999999777665555567778899999988666554443 344444322 2344555443
No 211
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.44 E-value=7.6e-08 Score=97.17 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=73.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++...+...+ ..+....++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~------------------------~g~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE------------------------TGAKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH------------------------HCCEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh------------------------CCCeEcCCHHHHHhc
Confidence 48999999999999999999999999999998644333211 112333445 66889
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 270 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAV 270 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHH
Confidence 99999999976655444446677789999998865555333 3444444
No 212
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.43 E-value=3e-08 Score=99.09 Aligned_cols=113 Identities=9% Similarity=0.043 Sum_probs=77.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 589999999999999999999999999999986532211 011112234 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccCC-CCcEEEeccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF 447 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~-~~r~vg~h~~ 447 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+.. .-...++..|
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~ 254 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVT 254 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSC
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCC
Confidence 99999999977765554446677889999998866555333 345444432 2233455544
No 213
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.43 E-value=3.9e-07 Score=91.17 Aligned_cols=104 Identities=20% Similarity=0.253 Sum_probs=71.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (539)
.+.+||+|||+|.||.++|..++..|+ +|+++|+++++++....++.+.. .... ...+..+++++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~----~~~~---------~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS----LFLK---------TPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG----GGCS---------CCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh----hccC---------CCeEEEcCCHH
Confidence 345799999999999999999999998 99999999887766544432211 0000 02344566788
Q ss_pred CCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 384 ~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++++||+||.+... +..+.+++.+.+.++++ +++++..+
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vlvvt 136 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVS 136 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECS
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEec
Confidence 89999999988621 23455566677888854 45554333
No 214
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.42 E-value=5.4e-07 Score=86.96 Aligned_cols=137 Identities=16% Similarity=0.173 Sum_probs=95.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++.++...+...|..++.++..+.|+|.=. |-|+++. ....++ +.|...++||++.+.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~IN----SPGGsV~----------------ag~aIy-d~I~~~k~pV~t~v~ 148 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYIN----SPGGVVT----------------AGLAIY-DTMQYILNPICTWCV 148 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSCSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEc
Confidence 3788899999999988866555677777421 1122221 123455 678889999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCCCcchh-h-----------------cccccc--CHHHHHHHHH
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRLV--GLSKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~-~-----------------~l~r~v--G~~~a~~l~l 164 (539)
|.|..+|.-|+++||. |++.+++.++.....-|. .|-. . .+...- ......+++-
T Consensus 149 G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~d 225 (277)
T 1tg6_A 149 GQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAME 225 (277)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHS
T ss_pred cEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999998875543222 1110 0 011111 2344555555
Q ss_pred cCCCCCHHHHHHcCCcceecCcc
Q 009256 165 LSKSITSEEGWKLGLIDAVVTSE 187 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~ 187 (539)
.+..++++||+++||||+|....
T Consensus 226 rd~~lta~EAle~GLID~I~~~~ 248 (277)
T 1tg6_A 226 RDRYMSPMEAQEFGILDKVLVHP 248 (277)
T ss_dssp SCEEECHHHHHHHTSCSEECSSC
T ss_pred cCcccCHHHHHHCCCCCEecCcc
Confidence 56778999999999999998553
No 215
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.41 E-value=1e-07 Score=95.97 Aligned_cols=101 Identities=14% Similarity=0.028 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++...+.. .......++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--------------------------EGAIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--------------------------TTCEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--------------------------cCCeEeCCHHHHHhh
Confidence 589999999999999999999999999999986432221 012223345 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|.+.+....+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 277 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEAL 277 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999977665544445677789999998865555333 3444444
No 216
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.40 E-value=9.8e-08 Score=96.46 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=69.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++.. +.. .+. .+....++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~-------------g~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RAD-------------GFAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHT-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------Hhc-------------CceEeCCHHHHHhh
Confidence 48999999999999999999999999999998632 221 111 12333455 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
||+|+.++|...+.+..+-++..+.++++++++..+.+-.
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 255 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAEL 255 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence 9999999997766554444567778999999886555433
No 217
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.39 E-value=1.6e-07 Score=98.91 Aligned_cols=76 Identities=13% Similarity=0.175 Sum_probs=65.9
Q ss_pred CCCcHHHHHHHHHHHHHcCceeEEEcCcccchhhcchHHHHHHHHHHHHcCC--CHHHHHHHH-HhCCCCc---chhhcc
Q 009256 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQEG 535 (539)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lg~~~v~v~~~~g~v~nrl~~~~~~Ea~~l~~~G~--~~~~id~a~-~~~g~~~---Gpf~~~ 535 (539)
..+++++.+.+..+...+|+.++.+ .+|+++||++.+++|||..++++|+ +++|||.+| .|+|||+ |||+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~ 407 (463)
T 1zcj_A 330 HKPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYA 407 (463)
T ss_dssp EEECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHH
Confidence 3468899998888888888665543 3799999999999999999999997 599999999 8999998 999999
Q ss_pred ccCC
Q 009256 536 GCWS 539 (539)
Q Consensus 536 d~~~ 539 (539)
|.++
T Consensus 408 D~~G 411 (463)
T 1zcj_A 408 ASVG 411 (463)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9753
No 218
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.37 E-value=2.6e-06 Score=89.01 Aligned_cols=200 Identities=18% Similarity=0.204 Sum_probs=144.1
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCCC--------------CCCCHHHHHHHHHHHHHH-hcCCCceEEEEecCCCCcccCCC
Q 009256 3 APRVTMEVG-NDGVAIITLINPPV--------------NALAIPIVAGLKDKFEEA-TSRDDVKAIVLTGNGGRFSGGFD 66 (539)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~~--------------Nal~~~~~~~l~~~~~~~-~~d~~v~~vvl~g~g~~F~aG~D 66 (539)
|..+...++ ..+++.++...|.. +.....|-.||.+++-.+ -++.++.-.++...|+.
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 444555553 45789999987631 233355788886666555 45678888888766532
Q ss_pred chhhhhh------c-CCCcccccchHHHHHHHHHHHhCCCcEEEEE-cCccccch-hHhhhccCEEEeeC-------Cce
Q 009256 67 INVFQKV------H-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (539)
Q Consensus 67 l~~~~~~------~-~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav-~G~a~GgG-~~lal~~D~~ia~~-------~a~ 130 (539)
..+... . +..-+.+...+..+.+ .+|.-...-++|.| .|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 222211 1 1111233344555666 66778888899999 79998776 59999999999973 378
Q ss_pred EeCCcccCCCCCCcchhhccccc-cCHHHHHHH--HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchh
Q 009256 131 LGLPELTLGVIPGFGGTQRLPRL-VGLSKAIEM--MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207 (539)
Q Consensus 131 f~~pe~~~Gl~p~~g~~~~l~r~-vG~~~a~~l--~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~ 207 (539)
+.+.+.++|..|-..+..||.++ .|..-..+. ...|+++++++|.++|||+...++-+.+++++-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 99999999999988888888755 344433332 235999999999999999999888899999999999999999987
Q ss_pred hhh
Q 009256 208 IRS 210 (539)
Q Consensus 208 ~~~ 210 (539)
+..
T Consensus 497 ~~~ 499 (556)
T 2w3p_A 497 LTG 499 (556)
T ss_dssp HHH
T ss_pred hcc
Confidence 753
No 219
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.37 E-value=3.6e-07 Score=93.79 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=69.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++.... .......++ +.++.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----------------------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----------------------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----------------------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----------------------------cCcEecCCHHHHHhh
Confidence 5899999999999999999999999999998743100 011223344 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~ 436 (539)
||+|+.++|...+.+.-+-++....++++++++..+.+-.+ ..+...+.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 99999999977665444435667789999999866655444 34555443
No 220
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.36 E-value=8.5e-07 Score=92.11 Aligned_cols=72 Identities=19% Similarity=0.223 Sum_probs=55.3
Q ss_pred ceEEEEcCCCC--cHHHHHHHHH----CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~m--G~~iA~~l~~----~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+||+|||+|.| |.+++..++. .| +|++||+++++++..... . ..... ...+++.++|+
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~-~----~~l~~----------~~~~I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVI-G----NHSGN----------GRWRYEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHH-H----TTSTT----------SCEEEEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHH-H----HHHhc----------cCCeEEEECCH
Confidence 59999999998 5789988886 57 999999999988775321 1 11111 12568888998
Q ss_pred -cCCCCcCEEEEccc
Q 009256 383 -SEFKDVDMVIEAVI 396 (539)
Q Consensus 383 -~~~~~aDlVi~avp 396 (539)
+++++||+||++++
T Consensus 70 ~eAl~dADfVI~air 84 (450)
T 3fef_A 70 KKALSAADIVIISIL 84 (450)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhcCCCEEEeccc
Confidence 78999999999995
No 221
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.36 E-value=5.2e-07 Score=89.80 Aligned_cols=124 Identities=16% Similarity=0.107 Sum_probs=80.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++..+ +. ..++ +.+++
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 5899999999999999999999999999999875311 01 1233 55788
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccCCCCcEEEeccCC--CC------CCCCeee
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFS--PA------HVMPLLE 457 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~~~~r~vg~h~~~--p~------~~~~~ve 457 (539)
||+|+.++|.+.+....+-++..+.++++++++..+++-.+. .+...+...-.-.++..|. |. +..+.+.
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~~L~~~~nvi 273 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGHPLYALPNAV 273 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTSGGGGCTTEE
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCChhhhCCCEE
Confidence 999999999776543322234556789999888666654333 4555554211223455443 21 2234455
Q ss_pred eecCCC
Q 009256 458 IVRTER 463 (539)
Q Consensus 458 i~~~~~ 463 (539)
++|+..
T Consensus 274 ltPh~~ 279 (311)
T 2cuk_A 274 ITPHIG 279 (311)
T ss_dssp ECCSCT
T ss_pred ECCcCC
Confidence 666543
No 222
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.35 E-value=8e-07 Score=89.95 Aligned_cols=137 Identities=7% Similarity=0.011 Sum_probs=85.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++.. +... ..| +.. .++ +.++.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLE-----------ENG-------------VEP-ASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHH-----------HTT-------------CEE-CCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHh-----------hcC-------------eee-CCHHHHHhc
Confidence 58999999999999999999999999999998532 2111 111 111 234 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccCCCCcEEEeccCC--C------CCCCCeee
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS--P------AHVMPLLE 457 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~~~r~vg~h~~~--p------~~~~~~ve 457 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+....-..++..|. | -+..+.+.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEE
Confidence 99999999987766555546677889999998865554333 34544443222114554332 2 12334556
Q ss_pred eecCCC-CcHHHHHH
Q 009256 458 IVRTER-TSAQVILD 471 (539)
Q Consensus 458 i~~~~~-t~~e~~~~ 471 (539)
+.|+-. .+.++.++
T Consensus 311 lTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 311 RSAHRAGALDSAFKK 325 (365)
T ss_dssp ECCSCSSCCHHHHHH
T ss_pred ECCccccCHHHHHHH
Confidence 666532 24444443
No 223
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.35 E-value=1.5e-07 Score=94.61 Aligned_cols=101 Identities=18% Similarity=0.116 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++.... +.+ .... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 48999999999999999999999999999999764321 001 1112 24 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~ 436 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999976665554446677889999998865555333 34555443
No 224
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.34 E-value=2.8e-08 Score=99.18 Aligned_cols=101 Identities=12% Similarity=0.094 Sum_probs=70.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++...+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 489999999999999999999999999999986321110 011112334 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 244 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTAL 244 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHH
Confidence 99999999976654433334556678999998866655443 3444444
No 225
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.34 E-value=4.2e-08 Score=97.69 Aligned_cols=101 Identities=12% Similarity=0.085 Sum_probs=71.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 489999999999999999999999999999987532111 000001233 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+...-+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 99999999977665544436677789999998866555333 3444444
No 226
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.34 E-value=2.6e-07 Score=92.72 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=71.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-----------SFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-----------hcC-------------cee-CCHHHHHhc
Confidence 48999999999999999999999999999998754 2211 111 111 234 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~ 435 (539)
||+|+.++|.+.+.+..+-++..+.++++++++..+++-.+. .+...+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999876554433356677899999988666654443 444444
No 227
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.32 E-value=1.9e-06 Score=84.70 Aligned_cols=104 Identities=16% Similarity=0.242 Sum_probs=70.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.+|.++|..|+.++. ++.+||++++..+.-...+.+... ..... ..+..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~~~-----------~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKY-----------PKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGTCC-----------CEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCCCC-----------CeEecCCCHHHhC
Confidence 489999999999999999998875 899999998776544333332110 01000 2345566789999
Q ss_pred CcCEEEEccc--------------CChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 387 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 387 ~aDlVi~avp--------------e~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
+||+||.+.. .+..+.+.+.+++.++.++. +++..|..
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~a-ivlvvsNP 120 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPES-KILVVTNP 120 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTC-EEEECSSS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCce-EEEEecCc
Confidence 9999998862 13445566667787777654 44444433
No 228
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.31 E-value=2.9e-07 Score=92.36 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=72.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||+++...+...+ . .+... ++ +.++.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------L-------------GLRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------H-------------TEEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------c-------------CceeC-CHHHHHhh
Confidence 58999999999999999999999999999998743332211 0 11112 34 56788
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|.+.+....+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999976665544446677889999999866655333 3444443
No 229
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.31 E-value=2.1e-06 Score=85.79 Aligned_cols=107 Identities=21% Similarity=0.286 Sum_probs=69.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+.+.. ...... -.++. ++.++++
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~-----------~~v~~-~~~~a~~ 73 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTT-----------VRVKA-GEYSDCH 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSC-----------CEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCC-----------eEEEe-CCHHHhC
Confidence 589999999999999999998885 99999999887764333332221 111000 12332 4458899
Q ss_pred CcCEEEEcccCC--h------------hHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 009256 387 DVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (539)
Q Consensus 387 ~aDlVi~avpe~--~------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i 431 (539)
+||+||.+++.. + .+.+++.+.+.++. |+++++.. +.|+..+
T Consensus 74 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~ 129 (317)
T 3d0o_A 74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVA--TNPVDIL 129 (317)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHH
Confidence 999999998432 1 34555666677775 55555443 3455433
No 230
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.31 E-value=2.1e-07 Score=95.22 Aligned_cols=104 Identities=10% Similarity=-0.030 Sum_probs=72.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||+++...+...+ . .+....++ +.++.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~-----------~-------------G~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-----------L-------------NLTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-----------H-------------TCEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhh-----------c-------------CceecCCHHHHHhc
Confidence 48999999999999999999999999999998644332211 0 12222334 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~ 436 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+. .+...+.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 999999999766543332245667889999988666654333 4555443
No 231
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.29 E-value=2.2e-07 Score=92.63 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++... .. +.| .... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~~-~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AE-----------KIN-------------AKAV-SLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HH-----------hcC-------------ceec-CHHHHHhh
Confidence 4899999999999999999999999999999986532 11 111 1111 34 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~~ 436 (539)
||+|+.++|...+....+-++..+.++++++++..+++-.+. .+...+.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 999999999766543222245566789999888766654333 4455443
No 232
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.28 E-value=2.4e-07 Score=93.55 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=70.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||..+|..+...|++|++||++++... . . ..| .....++ +.++.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-E-R----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-H-H----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-H-h----------hcC-------------CeecCCHHHHHhc
Confidence 4799999999999999999999999999998865311 1 0 001 1222234 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|.+.+.+..+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 99999999976554433335566788999998866665443 3444443
No 233
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.28 E-value=2.1e-07 Score=94.67 Aligned_cols=103 Identities=17% Similarity=0.073 Sum_probs=72.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||.++|..+...|++ |++||+++...+...+ .| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK-----------VG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH-----------TT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh-----------cC-------------cEecCCHHHHHh
Confidence 4899999999999999999999997 9999998754333211 11 2222344 5678
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhcc
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~ 435 (539)
+||+|+.++|...+....+-++..+.++++++++..+.+-. ...+...+
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL 271 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAAL 271 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHH
Confidence 99999999997765444333556678899998886665533 33444444
No 234
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.26 E-value=8.6e-07 Score=88.42 Aligned_cols=90 Identities=11% Similarity=0.110 Sum_probs=65.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
++|+|||+|.||..++..|++. |+ +|++||+++++.+.+.+.+ + ..+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~-----------~~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------Q-----------GEVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------S-----------SCCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------h-----------CCeEEeCCHHHHH
Confidence 4799999999999999999876 76 9999999999887764321 1 013334555 667
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
++||+||.|+|... .++.. +.++++++|++.++.
T Consensus 195 ~~aDiVi~atp~~~----~v~~~--~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 195 AGADVIITVTLATE----PILFG--EWVKPGAHINAVGAS 228 (312)
T ss_dssp TTCSEEEECCCCSS----CCBCG--GGSCTTCEEEECCCC
T ss_pred hcCCEEEEEeCCCC----cccCH--HHcCCCcEEEeCCCC
Confidence 89999999998532 22222 567888888765443
No 235
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.26 E-value=4.5e-07 Score=91.20 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=71.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.++|..+...|++|++||++++.. + +. ......++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~------------------------~~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EK------------------------KGYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HH------------------------TTCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hh------------------------hCeecCCHHHHHhh
Confidence 489999999999999999999999999999987643 1 10 01122234 55788
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+.+..+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL 249 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGL 249 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHH
Confidence 99999999977664433324566778999988866655333 3454444
No 236
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.25 E-value=4.8e-07 Score=93.16 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=71.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||..+|..+...|++|++||+++... . +......++ +.++.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~------------~~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------L------------GNATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------C------------TTCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------c------------CCceecCCHHHHHhc
Confidence 489999999999999999999999999999975320 0 112223344 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~--~i~~~~ 435 (539)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+. .+...+
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL 247 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADAL 247 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHH
Confidence 999999999877655433355667899999988666554443 444444
No 237
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.25 E-value=1.2e-06 Score=81.01 Aligned_cols=139 Identities=22% Similarity=0.191 Sum_probs=95.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~ 106 (539)
.++..+.+.+...|..++.++..+.|+|.=. |-|+++. ....++ +.|..+++||++.+.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~----------------~~~~I~-~~i~~~~~~v~t~~~ 96 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYIN----SPGGMVT----------------AGMGVY-DTMQFIKPDVSTICI 96 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHHhCCCeEEEEc
Confidence 4888999999999999887666666666421 1223221 123455 678899999999999
Q ss_pred CccccchhHhhhccCE--EEeeCCceEeCCcccCCCCCCcchhh------------------ccccccC--HHHHHHHHH
Q 009256 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLVG--LSKAIEMML 164 (539)
Q Consensus 107 G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~~------------------~l~r~vG--~~~a~~l~l 164 (539)
|.|.++|.-++++||- |++.+++++......-|. .|-.. .+.+.-| .....+++-
T Consensus 97 G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~ 173 (201)
T 3p2l_A 97 GLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTD 173 (201)
T ss_dssp EEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTS
T ss_pred CEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhh
Confidence 9999999999999998 999999998766543221 11110 0111112 344445555
Q ss_pred cCCCCCHHHHHHcCCcceecCc-chH
Q 009256 165 LSKSITSEEGWKLGLIDAVVTS-EEL 189 (539)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~-~~l 189 (539)
....++|+||+++||||+|++. ++|
T Consensus 174 ~~~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 174 RDNFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp SCEEEEHHHHHHHTSCSEECCCSCC-
T ss_pred cCeeecHHHHHHcCCccEecCCHHHh
Confidence 5566799999999999999854 444
No 238
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.25 E-value=8.4e-07 Score=88.66 Aligned_cols=119 Identities=23% Similarity=0.322 Sum_probs=71.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccCCccC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 384 (539)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+ .... ... .-.++. +++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl--------~~~~~~~~------~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDI--------NHGLPFMG------QMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHH--------TTSCCCTT------CEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH--------HHhHHhcC------CeEEEE-CCHHH
Confidence 3589999999999999999999998 9999999987765422221 1110 000 012332 45688
Q ss_pred CCCcCEEEEcccCCh--------------hHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhh----ccC-CCCcEEEe
Q 009256 385 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGE----KTS-SQDRIIGA 444 (539)
Q Consensus 385 ~~~aDlVi~avpe~~--------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~----~~~-~~~r~vg~ 444 (539)
+++||+||.+++... .+.+++.+.+.++. |+++++.. +.|+..+.. ... .+.|++|+
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 999999999986422 12356667788886 45555443 345443322 212 34577776
No 239
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.24 E-value=2.2e-07 Score=93.41 Aligned_cols=99 Identities=17% Similarity=0.113 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++. . .+ ...... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~------------~~-------------~~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP--E------------FE-------------PFLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG--G------------GT-------------TTCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh--h------------hh-------------cccccc-CHHHHHhc
Confidence 58999999999999999999999999999998753 0 00 011112 44 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 250 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKAL 250 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHH
Confidence 99999999976665444445667789999998866555333 3444443
No 240
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.23 E-value=3.9e-06 Score=87.51 Aligned_cols=123 Identities=20% Similarity=0.252 Sum_probs=78.8
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCeEEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 309 ~kI~iIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
+||+|||+|.+ |.+++..|+.+ +.+|++||+++ ++++.... +...+.. ..+ .+ ..++.++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~--~~~-~~--------~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVE--KAG-VP--------IEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHH--HTT-CC--------CEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHh--hcC-CC--------cEEEEeC
Confidence 58999999999 77888888874 66999999999 88777432 2222211 111 11 3566677
Q ss_pred Cc-cCCCCcCEEEEcccCCh----------------------------------hHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 381 DY-SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 381 ~~-~~~~~aDlVi~avpe~~----------------------------------~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
|+ +++++||+||.+++... .+..++.+.+.++++ +++++..|..
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P-~a~ii~~tNP 154 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP-DAWLINFTNP 154 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSS
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCC-CeEEEEeCCc
Confidence 87 88999999999997421 245566777888875 5555533433
Q ss_pred CCh-HHHhhccCCCCcEEEe
Q 009256 426 IDL-NIVGEKTSSQDRIIGA 444 (539)
Q Consensus 426 ~~~-~~i~~~~~~~~r~vg~ 444 (539)
..+ +..........|++|+
T Consensus 155 vdivT~a~~k~~p~~rViG~ 174 (450)
T 1s6y_A 155 AGMVTEAVLRYTKQEKVVGL 174 (450)
T ss_dssp HHHHHHHHHHHCCCCCEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEe
Confidence 332 2222223333477776
No 241
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.22 E-value=7.7e-06 Score=71.18 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=64.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+++|.|+|+|.+|..++..|.+.|++|+++|++++.++.+.+.- ...+ .+-. +++... . ..+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~----~~~~-~gd~~~~~~l~----~-------~~~~ 69 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG----FDAV-IADPTDESFYR----S-------LDLE 69 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT----CEEE-ECCTTCHHHHH----H-------SCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC----CcEE-ECCCCCHHHHH----h-------CCcc
Confidence 56899999999999999999999999999999998877653310 0000 0111 110000 0 1257
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
++|+||.++++ .+....+...+.+.. ...+++...+......
T Consensus 70 ~~d~vi~~~~~-~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~ 111 (141)
T 3llv_A 70 GVSAVLITGSD-DEFNLKILKALRSVS-DVYAIVRVSSPKKKEE 111 (141)
T ss_dssp TCSEEEECCSC-HHHHHHHHHHHHHHC-CCCEEEEESCGGGHHH
T ss_pred cCCEEEEecCC-HHHHHHHHHHHHHhC-CceEEEEEcChhHHHH
Confidence 89999999984 333333444444444 5556655444433333
No 242
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=98.18 E-value=1.1e-05 Score=86.00 Aligned_cols=161 Identities=15% Similarity=0.067 Sum_probs=109.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEE
Q 009256 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (539)
Q Consensus 25 ~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaa 104 (539)
.-++.+...+.+..+++.+.+.. +-+|.|.- |.|+.+.+-...-.. ...+...+... ..+....+|+|++
T Consensus 118 gGs~g~~~~~Ki~r~~e~A~~~~-lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~~~~--~~ls~~giP~Isv 187 (587)
T 1pix_A 118 AGAWVPGQAECLLRASDTAKTLH-VPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPFFRN--AELNQLGIPVIVG 187 (587)
T ss_dssp TTEECTTHHHHHHHHHHHHHHHT-CCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEe-----CCCCCccccchhccc--cccHHHHHHHH--HHHhCCCCCEEEE
Confidence 37888999999999999887663 55666654 456666553321110 01223333333 3478889999999
Q ss_pred EcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHHH-HcCCCCCHHH-------HH
Q 009256 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM-LLSKSITSEE-------GW 175 (539)
Q Consensus 105 v~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~-l~g~~~~a~e-------A~ 175 (539)
|.|.|.|||... ..||++|++++ +.+++.-.. ++-. ..-.-.++..+|.+++ .+|+.+++++ +.
T Consensus 188 v~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~~----~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~ 260 (587)
T 1pix_A 188 IYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMGG----MNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYT 260 (587)
T ss_dssp ECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCCS----CCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTT
T ss_pred EecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHhh----hccccccchhHHHHHHHHhCCccChhhcccHHHHHh
Confidence 999999999999 99999988864 888873221 1110 0011227899999999 9999988765 23
Q ss_pred HcCCcceecCcchHHHHHHHHHHHHHhcCc
Q 009256 176 KLGLIDAVVTSEELLKVSRLWALDIAARRK 205 (539)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~la~~~~ 205 (539)
+.|++|.++++++ .+.+.++++.+.-|
T Consensus 261 ~~GvvD~vv~~e~---~a~~~~r~~ls~lp 287 (587)
T 1pix_A 261 ETGFMREVYASEE---GVLEGIKKYVGMLP 287 (587)
T ss_dssp TSCCSCEEESSHH---HHHHHHHHHHHTSC
T ss_pred hcCceeEecCCHH---HHHHHHHHHHHhCC
Confidence 6999999998876 44555555555543
No 243
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.17 E-value=1.2e-05 Score=69.50 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=61.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+.+.. ....-.+.. +.... ....+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l-----------~~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTL-----------EDAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHH-----------HHTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHH-----------HHcCccc
Confidence 4799999999999999999999999999999998766543210 000000100 00000 0023678
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEec
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ 422 (539)
+|+||.++|.+.. ...+..+.+.++++.+++..
T Consensus 70 ~d~vi~~~~~~~~--~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 70 ADMYIAVTGKEEV--NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp CSEEEECCSCHHH--HHHHHHHHHHTTCCCEEEEC
T ss_pred CCEEEEeeCCchH--HHHHHHHHHHcCCCEEEEEe
Confidence 9999999985432 23334455556766766543
No 244
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.17 E-value=5.1e-06 Score=82.86 Aligned_cols=104 Identities=20% Similarity=0.222 Sum_probs=68.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. .... + -.++ ..++++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~~~~-~--------~~v~-~~~~~a~~ 71 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----AFTA-P--------KKIY-SGEYSDCK 71 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----GGSC-C--------CEEE-ECCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----HhcC-C--------eEEE-ECCHHHhC
Confidence 589999999999999999998887 99999999988775433332111 1000 0 1122 24558899
Q ss_pred CcCEEEEcccCCh--------------hHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 387 DVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 387 ~aDlVi~avpe~~--------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
+||+||.+.+... .+.+++.+.+.++. |+++++.. +.|+.
T Consensus 72 ~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~ 125 (318)
T 1ez4_A 72 DADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA--ANPVD 125 (318)
T ss_dssp TCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe--CCcHH
Confidence 9999999874321 34555666677776 45544433 34444
No 245
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.16 E-value=2.5e-06 Score=85.10 Aligned_cols=101 Identities=20% Similarity=0.249 Sum_probs=67.7
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCcc
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYS 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~ 383 (539)
..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+.. . .+..+.. +.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~----~-----------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL----P-----------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh----h-----------hcCCcEEEECcHH
Confidence 34689999999999999999999988 99999999988776544332211 0 0011222 34568
Q ss_pred CCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 384 ~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++++||+||.+... +..+.+.+.+.+.++++ +++++..+
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvt 125 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAA 125 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECS
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEcc
Confidence 89999999998632 22344566667777765 55554433
No 246
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.14 E-value=4.4e-06 Score=83.05 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=68.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.+. .... .+ -.++. +++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~----~~~~-~~--------~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA----TPFA-HP--------VWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT----GGGS-CC--------CEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh----Hhhc-CC--------eEEEE-CCHHHhC
Confidence 48999999999999999999987 59999999988777533332211 0000 00 12332 3568899
Q ss_pred CcCEEEEcccCC--------------hhHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 387 ~aDlVi~avpe~--------------~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
+||+||.+.+.. ..+.+++.+.+.++.++ ++++.. +.|+.
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~--tNPv~ 120 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPE-AVLLVA--TNPVD 120 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEC--SSSHH
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEEe--cCchH
Confidence 999999987432 33455666677788654 544433 33444
No 247
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.14 E-value=2.5e-06 Score=85.67 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=68.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.+||+|||+ |.+|.++|..++..|. +|+++|+++++++.....+.+.. .. ..++.+++++ +
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--------~~-------~~~i~~t~d~~~ 72 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--------FE-------GLNLTFTSDIKE 72 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--------CT-------TCCCEEESCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--------CC-------CCceEEcCCHHH
Confidence 469999997 9999999999999984 99999999987765444333210 10 0245566676 7
Q ss_pred CCCCcCEEEEccc--------------CChhHHHHHHHHHHHhCCCCe
Q 009256 384 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 417 (539)
Q Consensus 384 ~~~~aDlVi~avp--------------e~~~~~~~~~~~l~~~~~~~~ 417 (539)
++++||+||.+.. .+..+.+.+.+.+.++.++..
T Consensus 73 al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 73 ALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 7999999999862 133455666677888886654
No 248
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.13 E-value=6.6e-06 Score=82.30 Aligned_cols=103 Identities=18% Similarity=0.225 Sum_probs=68.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCccCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~ 385 (539)
+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. ... ..++. .++++++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~~~-----------~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----PFT-----------SPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----GGS-----------CCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----Hhc-----------CCeEEEECCHHHh
Confidence 589999999999999999998886 99999999988765433332111 000 11222 2455889
Q ss_pred CCcCEEEEcccCC--h------------hHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 386 KDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 386 ~~aDlVi~avpe~--~------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
++||+||.+.+.. + .+.+.+.+.+.++.+ +++++.. +.|+.
T Consensus 75 ~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~--tNPv~ 129 (326)
T 2zqz_A 75 KDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA--ANPVD 129 (326)
T ss_dssp GGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEC--SSSHH
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEe--CCcHH
Confidence 9999999987432 1 344555666777864 4544433 34444
No 249
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.11 E-value=9.4e-07 Score=77.50 Aligned_cols=87 Identities=21% Similarity=0.243 Sum_probs=60.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..++..|...|++|+++|+++++.+.+.+.+. ......++. +.+.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---------------------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---------------------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---------------------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---------------------CceEeecCHHHHhcC
Confidence 48999999999999999999999999999999998776543220 011223344 55788
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEec
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ 422 (539)
+|+||.++|..... +. .+.++++.+++..
T Consensus 81 ~Divi~at~~~~~~----~~--~~~l~~g~~vid~ 109 (144)
T 3oj0_A 81 NDVIITATSSKTPI----VE--ERSLMPGKLFIDL 109 (144)
T ss_dssp CSEEEECSCCSSCS----BC--GGGCCTTCEEEEC
T ss_pred CCEEEEeCCCCCcE----ee--HHHcCCCCEEEEc
Confidence 99999999865321 11 1345566666543
No 250
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.09 E-value=6.5e-07 Score=90.81 Aligned_cols=110 Identities=13% Similarity=0.035 Sum_probs=73.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++.+... . .. ...++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~----------------~------------~~-~~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG----------------D------------EG-DFRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT----------------C------------CS-CBCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc----------------c------------Cc-ccCCHHHHHhh
Confidence 4899999999999999999999999999997543210 0 01 12334 56789
Q ss_pred cCEEEEcccCChh----HHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccCC-CCcEEEeccC
Q 009256 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF 447 (539)
Q Consensus 388 aDlVi~avpe~~~----~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~~-~~r~vg~h~~ 447 (539)
||+|+.++|-..+ ....+-++..+.++++++++..+.+-.+ ..+...+.. .-...++..|
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~ 237 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVW 237 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCC
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeecc
Confidence 9999999996655 3333335566788999998865555433 345444432 2234455544
No 251
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.09 E-value=8.4e-07 Score=89.15 Aligned_cols=100 Identities=14% Similarity=0.033 Sum_probs=71.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..+|..+...|++|++||++++.. . + ...... ++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~------------------------~~~~~~-~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-H------------------------PDFDYV-SLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-C------------------------TTCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-H------------------------hccccC-CHHHHHhc
Confidence 489999999999999999999999999999986431 0 0 001111 33 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~~ 436 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-.+ ..+...+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999987765443335566789999988866655333 34555443
No 252
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.05 E-value=7.3e-07 Score=90.66 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=68.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||+|.||.++|..+...|++|++||++++.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 489999999999999999999999999999765421 001 11 1234 55789
Q ss_pred cCEEEEcccCChh----HHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhhcc
Q 009256 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~----~~~~~~~~l~~~~~~~~ii~s~ts~~~~--~~i~~~~ 435 (539)
||+|+.++|...+ ....+-+++.+.++++++++..+.+-.+ ..+...+
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL 221 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLL 221 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHH
Confidence 9999999997665 3332324566789999988865555333 3454444
No 253
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=98.00 E-value=2.1e-05 Score=72.47 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE--EecCCCC----cccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCc
Q 009256 27 ALAIPIVAGLKDKFEEATSRDDVKAIV--LTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (539)
Q Consensus 27 al~~~~~~~l~~~~~~~~~d~~v~~vv--l~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 100 (539)
.++.++...+...|..++.++..+-|. |.+.|.. ...-+|+ .....++ +.|...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 489999999999999887543333333 3333310 0000111 1233556 678899999
Q ss_pred EEEEEcCccccchhHhhhccC--EEEeeCCceEeCCcccCCCCCCcchhh------------------ccccccC--HHH
Q 009256 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLVG--LSK 158 (539)
Q Consensus 101 ~iaav~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~Gl~p~~g~~~------------------~l~r~vG--~~~ 158 (539)
|...+-|.|.+.|.-|++++| .|++.+++++.+-...-|.. .|-.. .+.+.-| ...
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~--~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~ 176 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIP--FNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNV 176 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCC--SSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCccccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999 59999999987655543331 11110 1111112 234
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcc
Q 009256 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSE 187 (539)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~ 187 (539)
..+++-....++|+||+++||||+|++.|
T Consensus 177 I~~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 177 ISNVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred HHHHhcCCcccCHHHHHHcCCccEeecCC
Confidence 44555566779999999999999998653
No 254
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.99 E-value=2.3e-05 Score=68.24 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=59.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+. . ..+-.|-.+..+. +.. ..+.++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~---g--~~~i~gd~~~~~~---l~~-------a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER---G--VRAVLGNAANEEI---MQL-------AHLECA 72 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---T--CEEEESCTTSHHH---HHH-------TTGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc---C--CCEEECCCCCHHH---HHh-------cCcccC
Confidence 479999999999999999999999999999999988776321 0 0000010000000 000 135789
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEE
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~ 420 (539)
|+||.++|++..... +...+....+...+++
T Consensus 73 d~vi~~~~~~~~n~~-~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGE-IVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHH-HHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHH-HHHHHHHHCCCCeEEE
Confidence 999999987654322 2233434433334444
No 255
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.98 E-value=1.1e-06 Score=88.40 Aligned_cols=99 Identities=14% Similarity=0.002 Sum_probs=69.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..+|..+...|++|++||++++.. . + ..... .++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~------------------------~~~~~-~~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-E------------------------DYCTQ-VSLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-T------------------------TTCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-H------------------------hcccc-CCHHHHHhh
Confidence 489999999999999999999999999999986431 0 0 00111 134 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhhcc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~--~~~i~~~~ 435 (539)
||+|+.++|...+....+-++..+.++++++++..+.+-. ...+...+
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL 248 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAV 248 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHH
Confidence 9999999997655433332456677899998876555433 33454444
No 256
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.98 E-value=6.1e-06 Score=80.70 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=64.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||.+++..|.+.|++|++||+++++.+.+.+.+ + +...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~----------g-------------~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF----------P-------------LEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS----------C-------------EEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc----------C-------------CeeehhHHhhhcC
Confidence 4899999999999999999999999999999998766542210 1 1223244 66789
Q ss_pred cCEEEEcccCChhHH-HHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLK-QKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~-~~~~~~l~~~~~~~~ii~s~ts 424 (539)
+|+||.|+|...... ...+. .+.++++.++++...
T Consensus 187 aDiVi~atp~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 999999998654210 00111 245778888877665
No 257
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=2.9e-05 Score=70.70 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~ 347 (539)
++|.|+|+|.||..++..|.+. |++|+++|+++++.+.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 4799999999999999999999 99999999999887765
No 258
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.93 E-value=1.5e-05 Score=66.52 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=36.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CeEEEEeCChHHHHHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKG 347 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~ 347 (539)
+++|.|+|+|.||..++..|.+.| ++|+++|+++++.+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 468999999999999999999999 9999999999877665
No 259
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.88 E-value=1.3e-05 Score=79.49 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=61.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..++..+...|.+|++||+++++.+.+.+ .|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-----------MGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----------TTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------CCC----------eEEc-hhhHHHHhhC
Confidence 48999999999999999999999999999999876554311 110 0000 1233 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
||+||.++|...-. ++..+.++++.+++..+.
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEECSS
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEEEeC
Confidence 99999999964321 123355777777765443
No 260
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.88 E-value=2.6e-05 Score=67.75 Aligned_cols=82 Identities=20% Similarity=0.163 Sum_probs=57.7
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 009256 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (539)
Q Consensus 308 ~~kI~iIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 382 (539)
.++|+|||+ |.||..++.+|.+.||+|+.+|++.+.+ ..+....++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 458999999 9999999999999999866666553211 123444555
Q ss_pred cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEe
Q 009256 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (539)
Q Consensus 383 ~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s 421 (539)
+....+|+++.++| .+...+++.++.+ ...+.+++.
T Consensus 65 el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~~ 100 (138)
T 1y81_A 65 ELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWFQ 100 (138)
T ss_dssp GSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEEC
T ss_pred HhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEEc
Confidence 44567999999999 4556667776665 445566553
No 261
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.88 E-value=2.8e-05 Score=76.70 Aligned_cols=89 Identities=22% Similarity=0.285 Sum_probs=61.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..++..+...|.+|++||+++++.+.+.+ .|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-----------MGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----------TTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----------CCC----------eecC-hhhHHHHhcC
Confidence 48999999999999999999999999999999876544311 110 0000 1223 55789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
+|+|+.++|...-.. +..+.++++.+++..+.
T Consensus 214 aDvVi~~~p~~~i~~-----~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 214 VDVCINTIPALVVTA-----NVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp CSEEEECCSSCCBCH-----HHHHHSCTTCEEEECSS
T ss_pred CCEEEECCChHHhCH-----HHHHhcCCCCEEEEecC
Confidence 999999998643211 23345778887765443
No 262
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.86 E-value=7.3e-05 Score=80.85 Aligned_cols=146 Identities=16% Similarity=0.075 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecCCCCcccC-CCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEEcCccc
Q 009256 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (539)
Q Consensus 32 ~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav~G~a~ 110 (539)
...++.+.|+.+..|+.++.|+|.-.. -| +++.... ...+.+ +.+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~ins----pGgG~v~~~~-------------~I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLKN----FAGGDQPSMQ-------------YIGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECTE----EEECCHHHHH-------------HHHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeCC----CCCCcHHHHH-------------HHHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 467889999999999999999997541 22 3332211 122334 3456667999999876 67
Q ss_pred cchhHhhhccCEEEeeCCceEeCCcccC------------CCCC---------Ccchhh-----------cc--------
Q 009256 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP---------GFGGTQ-----------RL-------- 150 (539)
Q Consensus 111 GgG~~lal~~D~~ia~~~a~f~~pe~~~------------Gl~p---------~~g~~~-----------~l-------- 150 (539)
.+|+.|+.+||-+++.+++.++...+.. |+-+ ..+-.+ .+
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999988765532 2210 000000 00
Q ss_pred ---------ccccCHHHHHHHHHc-------CCCCCHHHHHHcCCcceecCcchHHHHHHHH
Q 009256 151 ---------PRLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196 (539)
Q Consensus 151 ---------~r~vG~~~a~~l~l~-------g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 196 (539)
.|-+......+++-. +..++|++|++.||||++...+++.....+.
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~~~ 273 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKE 273 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 011222233333333 7899999999999999999777776655544
No 263
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.85 E-value=8e-05 Score=74.09 Aligned_cols=92 Identities=17% Similarity=0.202 Sum_probs=61.3
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCCc-
Q 009256 310 KVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY- 382 (539)
Q Consensus 310 kI~iIG~-G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~- 382 (539)
||+|||+ |.+|.+++..|+..| .+|+++|+++ .+..... +...... ..+.. ++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~d--------L~~~~~~--------~~l~~~~~t~d~~ 63 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAAD--------LSHIETR--------ATVKGYLGPEQLP 63 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHH--------HTTSSSS--------CEEEEEESGGGHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHH--------HhccCcC--------ceEEEecCCCCHH
Confidence 8999998 999999999999988 6999999997 1111111 1111100 13443 3466
Q ss_pred cCCCCcCEEEEcccC--Ch------------hHHHHHHHHHHHhCCCCeEE
Q 009256 383 SEFKDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCIL 419 (539)
Q Consensus 383 ~~~~~aDlVi~avpe--~~------------~~~~~~~~~l~~~~~~~~ii 419 (539)
+++++||+||.+... .. ...+.+.+.+.++.+...++
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi 114 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMIC 114 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 469999999998732 11 45666777788887544443
No 264
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.83 E-value=3.6e-05 Score=66.63 Aligned_cols=40 Identities=25% Similarity=0.224 Sum_probs=35.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
+++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~ 45 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY 45 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4579999999999999999999999999999998765543
No 265
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.82 E-value=2.7e-05 Score=68.97 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=35.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~ 58 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRL 58 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 489999999999999999999999999999999876543
No 266
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.81 E-value=3.3e-05 Score=74.84 Aligned_cols=65 Identities=17% Similarity=0.236 Sum_probs=51.1
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCCc
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (539)
+|+|||+|.||.+++..|.+.|++|+++|+++++.+.+.+.. + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 799999999999999999999999999999998776653321 1 01 1233 45 889
Q ss_pred CEEEEcccCCh
Q 009256 389 DMVIEAVIESV 399 (539)
Q Consensus 389 DlVi~avpe~~ 399 (539)
|+||.++|...
T Consensus 173 Divi~~tp~~~ 183 (263)
T 2d5c_A 173 RLLVNATRVGL 183 (263)
T ss_dssp SEEEECSSTTT
T ss_pred CEEEEccCCCC
Confidence 99999998653
No 267
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.80 E-value=7.9e-05 Score=73.74 Aligned_cols=119 Identities=18% Similarity=0.303 Sum_probs=71.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (539)
+||+|+| +|.+|.+++..|+..|+ +++++|+ ++++++.....+.+. ...+. + -.++. ++.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~----~~~~~-~--------~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG----IAYDS-N--------TRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHH----HTTTC-C--------CEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHH----HhhCC-C--------cEEEe-CCHH
Confidence 4899999 99999999999998886 7999999 877654322222111 11000 0 12222 3467
Q ss_pred CCCCcCEEEEcccC--Ch------------hHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhh----ccC-CCCcEEEe
Q 009256 384 EFKDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGE----KTS-SQDRIIGA 444 (539)
Q Consensus 384 ~~~~aDlVi~avpe--~~------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~----~~~-~~~r~vg~ 444 (539)
++++||+||.+... .. ...+.+.+.+.++.+ +.+++.. +.|+..+.. ... .+.|++|+
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv~--SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLTT--SNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEEC--CSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe--CChHHHHHHHHHHHcCCCHHHeeec
Confidence 89999999988742 11 344555566666654 5555433 344433222 222 24577776
No 268
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.74 E-value=7.6e-05 Score=74.68 Aligned_cols=101 Identities=19% Similarity=0.260 Sum_probs=64.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCCc
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 382 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~ 382 (539)
+||+|+| +|.+|.+++..|+..| ++|+++|++++. ... ..+ .... .. ..+.. ++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~-~dL-------~~~~-~~--------~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVT-ADI-------SHMD-TG--------AVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHH-HHH-------HTSC-SS--------CEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHH-HHh-------hccc-cc--------ceEEEEeCCCCH
Confidence 5899999 7999999999999999 799999998761 111 111 1100 00 12222 3355
Q ss_pred -cCCCCcCEEEEcccC--Ch------------hHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 383 -SEFKDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 383 -~~~~~aDlVi~avpe--~~------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
+++++||+||.+.+. .. ...+.+.+.+.++.+ +.+++.. +.|+..
T Consensus 71 ~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv~--SNPv~~ 130 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNLI--SNPVNS 130 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC--CSSHHH
T ss_pred HHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEE--CCchHH
Confidence 678999999999742 11 445566667777774 4444433 345444
No 269
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.72 E-value=3.6e-05 Score=67.46 Aligned_cols=85 Identities=14% Similarity=0.039 Sum_probs=58.1
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~----G~mG~~iA~~l~~~G~~V~~~d~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
++|+|||+ |.||..++.+|.+.||+|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 47999999 8999999999999999977766654 211 123344455
Q ss_pred -cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCC
Q 009256 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (539)
Q Consensus 383 -~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~ 426 (539)
+....+|+++.++|. +....++.++.+. ..+.+++. +++.
T Consensus 65 ~el~~~~Dlvii~vp~--~~v~~v~~~~~~~-g~~~i~i~-~~~~ 105 (145)
T 2duw_A 65 ADVPEKVDMVDVFRNS--EAAWGVAQEAIAI-GAKTLWLQ-LGVI 105 (145)
T ss_dssp TTCSSCCSEEECCSCS--THHHHHHHHHHHH-TCCEEECC-TTCC
T ss_pred HHcCCCCCEEEEEeCH--HHHHHHHHHHHHc-CCCEEEEc-CChH
Confidence 445679999999994 4455666666553 44556654 3444
No 270
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.69 E-value=6.6e-05 Score=75.77 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=64.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
++|+|||+|.||..++..+.. ...+|++|||++++.+.+.+.+.. ..+ -.+...++. +.+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g-----------~~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSG-----------LTIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTT-----------CEEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccC-----------ceEEEeCCHHHHH
Confidence 479999999999999988754 346999999999998877553210 001 012334455 667
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
++||+||.|+|.... ..++. .+.+++++.|+..++.
T Consensus 193 ~~aDiVi~aTps~~~--~pvl~--~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 193 KGVDIITTVTADKAY--ATIIT--PDMLEPGMHLNAVGGD 228 (350)
T ss_dssp TTCSEEEECCCCSSE--EEEEC--GGGCCTTCEEEECSCC
T ss_pred hcCCEEEEeccCCCC--Cceec--HHHcCCCCEEEECCCC
Confidence 899999999996520 01111 2467888887765553
No 271
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.67 E-value=0.00015 Score=67.97 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=59.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+||.|+|+|.+|..++..|.+.|++|+++|++++.++.+.+.. ...+-.|- .+.+... ...+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~-----------~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILR-----------DAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHH-----------HHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHH-----------hcCccc
Confidence 3799999999999999999999999999999999877653210 00000010 1100000 023689
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHh-CCCCeEEE
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 420 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~-~~~~~ii~ 420 (539)
||+||.+++++.. ......+... .+...+++
T Consensus 66 ad~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 66 NDVVVILTPRDEV--NLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp TCEEEECCSCHHH--HHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEecCCcHH--HHHHHHHHHHHcCCCeEEE
Confidence 9999999986542 2333444443 45455554
No 272
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.66 E-value=6.1e-05 Score=75.51 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=65.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------eEEEEeCC----hHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcc
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i 376 (539)
+||+|+|+ |.+|.+++..|+..|+ +|+++|++ +++++.....+ ...... ....+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl--------~~~~~~------~~~~i 71 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI--------DDCAFP------LLAGM 71 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH--------HTTTCT------TEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHH--------hhhccc------ccCcE
Confidence 58999998 9999999999999886 89999999 55444321111 111000 01245
Q ss_pred cccCCc-cCCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 377 KGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 377 ~~~~~~-~~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
..+++. +++++||+||.+... +....+.+.+.+.++..++++++..|
T Consensus 72 ~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 72 TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 555665 789999999987631 12345566677888864555554333
No 273
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.65 E-value=2.6e-05 Score=81.63 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=63.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||.|.||.++|..+...|.+|++||+++...... ...| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-----------~~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-----------AMEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-----------HTTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-----------HHcC-------------CEe-CCHHHHHhc
Confidence 489999999999999999999999999999998753222 1111 111 234 66899
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+|+.++....-+ -++..+.++++++|+..+.+
T Consensus 333 aDiVi~~~~t~~lI----~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVI----NHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSB----CHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCccccc----CHHHHhhCCCCcEEEEcCCC
Confidence 99999998322211 13455678999998866554
No 274
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.63 E-value=2.4e-05 Score=81.66 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=62.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||.|.||.++|..+...|.+|++||+++.....+. ..| +.. .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CEe-cCHHHHHhc
Confidence 4899999999999999999999999999999987643321 111 111 234 66899
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+|+.+.. ...+ +-++..+.++++++|+..+.+
T Consensus 313 aDiVi~~~~-t~~l---I~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTG-NVDV---IKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCS-SSSS---BCHHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCC-hhhh---cCHHHHhhcCCCcEEEEeCCC
Confidence 999999963 2221 113455678999998866554
No 275
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.59 E-value=0.002 Score=62.58 Aligned_cols=155 Identities=14% Similarity=0.095 Sum_probs=98.0
Q ss_pred EEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHH
Q 009256 15 VAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN 92 (539)
Q Consensus 15 v~~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (539)
|+++ -|++. .-+++....+.+.++++.+.+.. +-+|.|.-.|+ +-..|-.. ...++.... ..+ .
T Consensus 123 V~v~-a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~-lPlI~l~dsgG-----ar~qEGi~-----sl~q~aki~-~~l-~ 188 (285)
T 2f9i_B 123 FGVA-VMDSRFRMGSMGSVIGEKICRIIDYCTENR-LPFILFSASGG-----ARMQEGII-----SLMQMGKTS-VSL-K 188 (285)
T ss_dssp EEEE-EECTTTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEECS-----CCGGGHHH-----HHHHHHHHH-HHH-H
T ss_pred EEEE-EEccccccCcCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC-----cchhhhhh-----hHhHHHHHH-HHH-H
Confidence 4444 45554 37899999999999999888764 56777754333 22222000 000111111 233 4
Q ss_pred HHHhCCCcEEEEEcCccccchhHh-hhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCH
Q 009256 93 LIEDCKKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (539)
Q Consensus 93 ~i~~~~~p~iaav~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a 171 (539)
++.....|.|+.+.|.|+||+... ++.+|+++|.++|.+++.... +..+.+-+.+. -..-+|
T Consensus 189 ~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~-------vi~~~~~~~~~----------e~~~~A 251 (285)
T 2f9i_B 189 RHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRR-------VIEQTINEKLP----------DDFQTA 251 (285)
T ss_dssp HHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH-------HHHHHHTSCCC----------TTTTBH
T ss_pred HHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHH-------HHHHHhcccch----------HhHhhH
Confidence 467789999999999999999655 889999999999988763221 11111111111 111247
Q ss_pred HHHHHcCCcceecCcchHHHHHHHHHHHH
Q 009256 172 EEGWKLGLIDAVVTSEELLKVSRLWALDI 200 (539)
Q Consensus 172 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~l 200 (539)
+-..+.|+||.|++++++.+...++...+
T Consensus 252 e~~~~~G~iD~Iv~~~e~r~~l~~~L~~l 280 (285)
T 2f9i_B 252 EFLLEHGQLDKVVHRNDMRQTLSEILKIH 280 (285)
T ss_dssp HHHHHTTCCSEECCGGGHHHHHHHHHHHT
T ss_pred HHHHhcCCccEEeChHHHHHHHHHHHHHh
Confidence 77889999999999888777666665443
No 276
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.57 E-value=0.0001 Score=77.50 Aligned_cols=87 Identities=25% Similarity=0.256 Sum_probs=63.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||+|.||..+|..+...|.+|+++|+++++++.+.+ .|. .. .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCC-------------EE-ecHHHHHhC
Confidence 48999999999999999999999999999999987665422 121 11 122 45678
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
+|+||++++...-+. .+..+.++++.+++..+.
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeCC
Confidence 999999987544222 234456788888765444
No 277
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.56 E-value=0.00033 Score=72.23 Aligned_cols=119 Identities=14% Similarity=0.136 Sum_probs=71.6
Q ss_pred ceEEEEcCCCC-cHHHHHHHHH--C---CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~m-G~~iA~~l~~--~---G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+||+|||+|.. +..+...|+. . +.+|+++|+++++++.. ..+...+ .... .+++.++|+
T Consensus 3 ~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~-~~~~~~~---~~~~-----------~~v~~t~d~ 67 (417)
T 1up7_A 3 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIV-VDFVKRL---VKDR-----------FKVLISDTF 67 (417)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHH-HHHHHHH---HTTS-----------SEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHH-HHHHHHH---hhCC-----------eEEEEeCCH
Confidence 58999999985 2222334455 3 56899999999987753 2222211 1100 246667787
Q ss_pred -cCCCCcCEEEEcccC--------------Ch--------------------hHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 383 -SEFKDVDMVIEAVIE--------------SV--------------------PLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 383 -~~~~~aDlVi~avpe--------------~~--------------------~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
+++++||+||++.-. +. .+..++.+++.+++ +++++.-|....
T Consensus 68 ~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvd 145 (417)
T 1up7_A 68 EGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSG 145 (417)
T ss_dssp HHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHH
T ss_pred HHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHH
Confidence 889999999999821 01 23556677888888 666654444333
Q ss_pred h-HHHhhccCCCCcEEEe
Q 009256 428 L-NIVGEKTSSQDRIIGA 444 (539)
Q Consensus 428 ~-~~i~~~~~~~~r~vg~ 444 (539)
+ +..........|++|+
T Consensus 146 i~t~a~~k~~p~~rviG~ 163 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGL 163 (417)
T ss_dssp HHHHHHHHTTCCSSEEEC
T ss_pred HHHHHHHHhCCCCCEEEe
Confidence 2 2222223333478886
No 278
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.56 E-value=0.00013 Score=72.82 Aligned_cols=90 Identities=14% Similarity=0.038 Sum_probs=63.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
++|+|||+|.||..++..|.. ...+|.+|||++++.+.+.+.+.. .+ + .+. .+++ +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 479999999999999999887 346899999999998887654321 00 0 122 3445 667
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
++|+||.|+|....+ +. .+.+++++.|...++
T Consensus 187 -~aDvVi~aTp~~~pv----~~--~~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 187 -RCDVLVTTTPSRKPV----VK--AEWVEEGTHINAIGA 218 (322)
T ss_dssp -SSSEEEECCCCSSCC----BC--GGGCCTTCEEEECSC
T ss_pred -CCCEEEEeeCCCCce----ec--HHHcCCCeEEEECCC
Confidence 999999999965422 11 246788888776543
No 279
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.55 E-value=0.0002 Score=71.69 Aligned_cols=73 Identities=10% Similarity=0.028 Sum_probs=53.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. +.....+++ +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 61 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKEL----------------------AIPVAYGSYEE 61 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHT----------------------TCCCCBSSHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHc----------------------CCCceeCCHHH
Confidence 345899999999999999999884 67776 7899998877653321 111334555 3
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. ++|+|++|+|.....
T Consensus 62 ll~~~~~D~V~i~tp~~~h~ 81 (330)
T 3e9m_A 62 LCKDETIDIIYIPTYNQGHY 81 (330)
T ss_dssp HHHCTTCSEEEECCCGGGHH
T ss_pred HhcCCCCCEEEEcCCCHHHH
Confidence 444 799999999976653
No 280
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.55 E-value=5.4e-05 Score=77.65 Aligned_cols=88 Identities=19% Similarity=0.147 Sum_probs=62.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||.|.+|.++|..+...|.+|+++|+++.....+.. .| ... .++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~-----------~G-------------~~~-~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM-----------EG-------------YQV-LLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH-----------hC-------------Cee-cCHHHHHhh
Confidence 48999999999999999999999999999999876544311 11 111 234 67899
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+|+.+.....-+. .+..+.++++++|+..+.+
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINvgRg 300 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNIGHF 300 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEECSSS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEeCCC
Confidence 999998664322111 2345668899988754433
No 281
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.52 E-value=0.00039 Score=70.28 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=54.4
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------~~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-----------------------GARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-----------------------CCEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCceeCCH
Confidence 3456899999999999999999887 77865 8899999877764321 13445566
Q ss_pred -cCCC--CcCEEEEcccCChh
Q 009256 383 -SEFK--DVDMVIEAVIESVP 400 (539)
Q Consensus 383 -~~~~--~aDlVi~avpe~~~ 400 (539)
+.+. ++|+|++|+|....
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEECCCcHHH
Confidence 4444 79999999997654
No 282
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.51 E-value=8.5e-05 Score=70.69 Aligned_cols=78 Identities=23% Similarity=0.206 Sum_probs=53.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC-C
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 386 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~ 386 (539)
||+|||+|.||..++..+.+.|++| .+||+++. .+. ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------------------------------~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------------------------------MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------------------------------EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------------------------------hcCCHHHHhcC
Confidence 7999999999999999999999997 69998842 110 12333 334 6
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
++|+|++|+|.+.. . ++. ...+..+..+++.++
T Consensus 50 ~~DvVv~~~~~~~~-~-~~~---~~~l~~G~~vv~~~~ 82 (236)
T 2dc1_A 50 EMDVAVEAASQQAV-K-DYA---EKILKAGIDLIVLST 82 (236)
T ss_dssp CCSEEEECSCHHHH-H-HHH---HHHHHTTCEEEESCG
T ss_pred CCCEEEECCCHHHH-H-HHH---HHHHHCCCcEEEECc
Confidence 89999999995532 2 222 233445666665543
No 283
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.46 E-value=5.1e-05 Score=76.78 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=64.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHh-------c-CC---CCHHHHHHHhhccc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT-------R-GK---LTQDKANNALKMLK 377 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~-------~-~~---~~~~~~~~~~~~i~ 377 (539)
.||+|||+|.||..++..+...|.+|+++|+++++++.+.+. .. ..+. . +. ++.+.....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga---~~~~l~~~~~~~~gya~~~~~~~~~~~----- 255 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GA---QWLDLGIDAAGEGGYARELSEAERAQQ----- 255 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TC---EECCCC-------------CHHHHHHH-----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC---eEEeccccccccccchhhhhHHHHhhh-----
Confidence 589999999999999999999999999999999987776431 00 0000 0 00 001000000
Q ss_pred ccCCc-cCCCCcCEEEEcc--cCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 378 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 378 ~~~~~-~~~~~aDlVi~av--pe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
..++ +.++++|+||.++ |....- .-+-++..+.++++.+|++.+
T Consensus 256 -~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 256 -QQALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp -HHHHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETT
T ss_pred -HHHHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEe
Confidence 1122 5679999999986 432110 011245666788999888654
No 284
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.45 E-value=9.3e-05 Score=73.46 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=62.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-C-CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHIL-N-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~-~-G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
++|+|||+|.||..++..|.. . ..+|++|||+ +.+.+.+++...+ | -.+... +. +++
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g-----------~~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------G-----------VPARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------T-----------SCEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------C-----------CeEEEe-CHHHHH
Confidence 479999999999999999886 3 4589999999 5455444332111 1 012223 45 668
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
++||+||.|+|....+ +. .+.++++++|.+..|.
T Consensus 182 ~~aDIVi~aT~s~~pv----l~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTTPL----FA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSSCS----SC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCCcc----cC--HHHcCCCcEEEECCCC
Confidence 8999999999865322 21 3568899988876654
No 285
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.44 E-value=0.0001 Score=73.84 Aligned_cols=101 Identities=19% Similarity=0.121 Sum_probs=70.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|||||.|.+|..+|..+...|.+|..||+.+..... + .... ..++ +.++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~-------------~~~~-~~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------E-------------KGCV-YTSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------H-------------TTCE-ECCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------h-------------cCce-ecCHHHHHhh
Confidence 58999999999999999999999999999987542111 0 0111 1233 56789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhhccC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~--~~~~~i~~~~~ 436 (539)
||+|+..+|-..+.+.-+=++..+.++++++++..+-+ +.-..+...+.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHH
Confidence 99999999977665443335566789999988744434 33345555443
No 286
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.43 E-value=0.0031 Score=66.38 Aligned_cols=153 Identities=10% Similarity=0.059 Sum_probs=100.2
Q ss_pred cCcEEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHH
Q 009256 12 NDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVEL 89 (539)
Q Consensus 12 ~~~v~~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 89 (539)
++.-..|.-|.+. .-++.....+.+..+++.+.+. .+-+|.|.-. .|+.+.+-.. ....+.+.+...
T Consensus 95 ~Gr~v~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dS-----gGaRmqEg~~-----~l~~~~~i~~~~ 163 (530)
T 3iav_A 95 DGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQEGVA-----SLGAYGEIFRRN 163 (530)
T ss_dssp TTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGGTHH-----HHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcC-----CCcchhhhhh-----hHHHHHHHHHHH
Confidence 3433344445553 4899999999999999988765 4567777643 3444432110 011111111111
Q ss_pred HHHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCC
Q 009256 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKS 168 (539)
Q Consensus 90 ~~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~ 168 (539)
. ++.. ..|+|+.|.|+|.|||......||++|++++ +.+++. |+...+. .+|+.
T Consensus 164 ~--~~s~-~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~~--~~ge~ 218 (530)
T 3iav_A 164 T--HASG-VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIKT--VTGED 218 (530)
T ss_dssp H--HTTT-TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCC
T ss_pred H--HHcC-CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHHH--HhCCc
Confidence 1 1222 3999999999999999998889999999975 888763 3222221 57889
Q ss_pred CCHHHH-------HHcCCcceecCcc-hHHHHHHHHHHHH
Q 009256 169 ITSEEG-------WKLGLIDAVVTSE-ELLKVSRLWALDI 200 (539)
Q Consensus 169 ~~a~eA-------~~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (539)
+++++. ...|++|.++++| +..+.++++...+
T Consensus 219 v~~e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 219 VGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp CCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred CChhhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence 999875 6899999999776 4666666666655
No 287
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.43 E-value=5.9e-05 Score=76.93 Aligned_cols=110 Identities=14% Similarity=0.114 Sum_probs=64.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCC---CCHHHHHHHhhccc------cc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK---LTQDKANNALKMLK------GV 379 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~i~------~~ 379 (539)
.||+|||+|.+|..++..+...|.+|++||+++++++.+.+. .. ..+.... -+.+........++ -.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~---~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GA---KFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TC---EECCCCC-----------------CHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CC---ceeecccccccccccccchhhhcchhhhhhhH
Confidence 489999999999999999999999999999999887776331 00 0000000 00000000000000 00
Q ss_pred CCc-cCCCCcCEEEEcc--cCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 380 LDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 380 ~~~-~~~~~aDlVi~av--pe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
.++ +.+++||+||.++ |....- .-+-++..+.++++.+|++.+
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap-~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAP-RLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCC-CCBCHHHHTTSCTTCEEEETT
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCC-EEecHHHHhcCCCCCEEEEEe
Confidence 122 5678999999986 432210 011245666788999988655
No 288
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.43 E-value=0.00036 Score=70.22 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=62.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. + ....+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------------------g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEAN----------------------G-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTT----------------------T-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc----------------------C-CceeCCHHHH
Confidence 35899999999999999999886 67776 7899998877653210 1 3344555 44
Q ss_pred CC--CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
+. ++|+|++|+|..... .+.....+. ...+++.-..+....+
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~ 104 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTHV--DLITRAVER--GIPALCEKPIDLDIEM 104 (344)
T ss_dssp TTCSCCCEEEECSCGGGHH--HHHHHHHHT--TCCEEECSCSCSCHHH
T ss_pred hcCCCCCEEEEeCCchhhH--HHHHHHHHc--CCcEEEECCCCCCHHH
Confidence 55 799999999976653 333333222 1224544333555543
No 289
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.43 E-value=0.00034 Score=69.26 Aligned_cols=71 Identities=14% Similarity=-0.036 Sum_probs=52.5
Q ss_pred cceEEEEcCCCCcHH-HHHHHHH-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+.||+|||+|.||.. ++..+.+ .+++|+ ++|+++++++...+.. .+...+++ +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------~~~~~~~~~~ 62 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY-----------------------RIMPFDSIES 62 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH-----------------------TCCBCSCHHH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHH
Confidence 458999999999997 8888876 467877 8999999877764421 12224455 4
Q ss_pred CCCCcCEEEEcccCChhH
Q 009256 384 EFKDVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~ 401 (539)
.+.++|+|++|+|.....
T Consensus 63 ll~~~D~V~i~tp~~~h~ 80 (308)
T 3uuw_A 63 LAKKCDCIFLHSSTETHY 80 (308)
T ss_dssp HHTTCSEEEECCCGGGHH
T ss_pred HHhcCCEEEEeCCcHhHH
Confidence 456999999999976643
No 290
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.42 E-value=0.00053 Score=68.07 Aligned_cols=101 Identities=19% Similarity=0.131 Sum_probs=62.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC--
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD-- 381 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 381 (539)
+||+|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++.....+.+.. .. .+. + -.+...++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~--~~~-~--------~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AG--TRS-D--------ANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TT--SCC-C--------CEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-Hh--cCC-C--------eEEEeCCcch
Confidence 38999999 9999999999998885 7999999 7765443222222111 00 000 0 12333333
Q ss_pred ccCCCCcCEEEEccc--C------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 382 YSEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 382 ~~~~~~aDlVi~avp--e------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
.+++++||+||.+.. . +....+.+.+.+.++. +.+++..|
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S 122 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT 122 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence 478999999998862 1 2234445566677777 44444333
No 291
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.39 E-value=0.0038 Score=65.65 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=94.9
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHH
Q 009256 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (539)
Q Consensus 17 ~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (539)
.|.-+... .-++.....+.+..+++.+.+. .+-+|.|.-. .|+.+.+-.. ....+.+.+.+.. .
T Consensus 108 ~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~~-----sl~~~~~i~~~~~---~ 173 (531)
T 3n6r_B 108 YVFSQDFTVLGGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGVD-----SLAGYGEVFQRNI---M 173 (531)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTHH-----HHHHHHHHHHHHH---H
T ss_pred EEEEECCCcccccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCcccc-----hhhhHHHHHHHHH---H
Confidence 34444443 3789999999999999988765 3556777643 4444443110 0011111111111 1
Q ss_pred HhCCCcEEEEEcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHHH
Q 009256 95 EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEE 173 (539)
Q Consensus 95 ~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~e 173 (539)
..-..|+|++|.|+|.|||......||++|+.++ +.+++. |+...+ ..+|+.+++++
T Consensus 174 ~s~~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~a--------------------GP~vI~--~~~ge~v~~E~ 231 (531)
T 3n6r_B 174 ASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVT--------------------GPDVVK--TVTNEQVSAEE 231 (531)
T ss_dssp TTTTSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCBSS--------------------CHHHHH--HHHCCCCCHHH
T ss_pred HhCCCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEeec--------------------CHHHHH--HHhCCccChhh
Confidence 2245899999999999999988888999999985 666542 222222 14789999999
Q ss_pred H-------HHcCCcceecCcch-HHHHHHHHHH
Q 009256 174 G-------WKLGLIDAVVTSEE-LLKVSRLWAL 198 (539)
Q Consensus 174 A-------~~~Glv~~vv~~~~-l~~~a~~~a~ 198 (539)
. .+.|++|.++++|+ ..+.++++..
T Consensus 232 LGGa~~h~~~sG~~d~v~~~e~~a~~~~r~lls 264 (531)
T 3n6r_B 232 LGGATTHTRKSSVADAAFENDVEALAEVRRLVD 264 (531)
T ss_dssp HHBHHHHHHTTSCCSEEESSHHHHHHHHHHHHT
T ss_pred cchHHHHhhccCcceEEeCCHHHHHHHHHHHHH
Confidence 8 89999999998753 4444444443
No 292
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.39 E-value=0.00026 Score=74.32 Aligned_cols=75 Identities=12% Similarity=0.180 Sum_probs=49.2
Q ss_pred ceEEEEcCCCCcHH--HHHHHHH----C--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 309 RKVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 309 ~kI~iIG~G~mG~~--iA~~l~~----~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
.||+|||+|..|.. +...++. . +.+|+++|+++++++......++.... .... -.+..++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~-~~~~-----------~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEE-LNSP-----------VKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHH-HTCC-----------CEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHH-cCCC-----------eEEEEeC
Confidence 38999999998754 2233332 1 348999999999877654333322211 1111 2467788
Q ss_pred Cc-cCCCCcCEEEEcc
Q 009256 381 DY-SEFKDVDMVIEAV 395 (539)
Q Consensus 381 ~~-~~~~~aDlVi~av 395 (539)
|. +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 88 7899999999886
No 293
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.38 E-value=0.00054 Score=70.05 Aligned_cols=88 Identities=20% Similarity=0.306 Sum_probs=61.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|+|+|.+|..+|..+...|.+|+++|+++.+...+.. .| .. ..++ +.+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~-----------~G-------------~~-v~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM-----------DG-------------FR-LVKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH-----------cC-------------CE-eccHHHHHhc
Confidence 48999999999999999999999999999999875443311 11 11 1233 66889
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
+|+||.| +....+. -.+..+.++++.+++....+
T Consensus 276 ADIVi~a-tgt~~lI---~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 276 VDIVITC-TGNKNVV---TREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp CSEEEEC-SSCSCSB---CHHHHHHSCTTEEEEECSST
T ss_pred CCEEEEC-CCCcccC---CHHHHHhcCCCcEEEEecCC
Confidence 9999997 3333221 12344567899988754443
No 294
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.37 E-value=0.00034 Score=71.01 Aligned_cols=151 Identities=11% Similarity=0.047 Sum_probs=91.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
++|+|||.|..|.+-|.+|.++|++|++--|.....+.. +.+.++.+ +.+.+.+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~-----~S~~~A~~-------------~Gf~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKR-----ASWRKATE-------------NGFKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTC-----HHHHHHHH-------------TTCEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCccccc-----chHHHHHH-------------CCCEecCHHHHHHhC
Confidence 589999999999999999999999998876633211110 00111122 234444333889999
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCC--cEEEeccCCCC----------CCCCee
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPA----------HVMPLL 456 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~--r~vg~h~~~p~----------~~~~~v 456 (539)
|+|+.-+|+.. -..++++|.++++++..+.- +.+..+.. ..+..|. .++-+-|-.|- .-.|.+
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~f-aHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALGY-SHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEEE-SSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEEe-cCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 99999999654 45778899999999988763 44544432 1222222 23333332111 111222
Q ss_pred eee-cCCCCcHHHHHHHHHHHHHcCce
Q 009256 457 EIV-RTERTSAQVILDLMTVGKIIKKV 482 (539)
Q Consensus 457 ei~-~~~~t~~e~~~~~~~l~~~lg~~ 482 (539)
.-+ +-...+-.+.+.+..+...+|..
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCC
Confidence 222 11233456778888888888853
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.35 E-value=0.00076 Score=59.27 Aligned_cols=39 Identities=8% Similarity=-0.028 Sum_probs=34.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCC-hHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~-~~~~~~~ 347 (539)
++|.|+|+|.+|..++..|.+.|++|+++|++ +++.+..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~ 43 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQL 43 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHH
Confidence 47999999999999999999999999999998 4555444
No 296
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.35 E-value=0.0004 Score=68.78 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=61.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHC-C--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCC
Q 009256 309 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~-G--~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~ 381 (539)
+||+||| +|.+|.+++..|... + .+++++|+++ ..+....++ ...... -.++. +.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl--------~~~~~~--------~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDL--------SHIPTA--------VKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHH--------HTSCSS--------EEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHh--------hCCCCC--------ceEEEecCCCc
Confidence 4899999 899999999999875 5 4899999997 332111111 111000 12322 245
Q ss_pred ccCCCCcCEEEEcccC--------------ChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 382 ~~~~~~aDlVi~avpe--------------~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++++++||+||.+... +..+.+.+.+.+.++.++ ++++..+
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~-a~vlvvt 118 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPK-ACIGIIT 118 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-SEEEECS
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-cEEEEec
Confidence 5889999999998732 223445555667788754 4444333
No 297
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.34 E-value=0.00032 Score=69.83 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=50.1
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHH-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 009256 307 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (539)
+..+|+|||+|.||.. ++..+.+ .|++|+ ++|+++++.+.+.+.. | +...++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~~ 60 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSLS 60 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcHH
Confidence 3458999999999997 8888876 477876 8999998876653321 1 12334443
Q ss_pred CC-CCcCEEEEcccCChh
Q 009256 384 EF-KDVDMVIEAVIESVP 400 (539)
Q Consensus 384 ~~-~~aDlVi~avpe~~~ 400 (539)
.+ .++|+|++++|....
T Consensus 61 ~l~~~~D~V~i~tp~~~h 78 (319)
T 1tlt_A 61 SLAASCDAVFVHSSTASH 78 (319)
T ss_dssp HHHTTCSEEEECSCTTHH
T ss_pred HhhcCCCEEEEeCCchhH
Confidence 33 679999999996654
No 298
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.33 E-value=0.00046 Score=65.71 Aligned_cols=86 Identities=21% Similarity=0.156 Sum_probs=57.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~-~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
|.||+|+|+|.||..++..+.+.+++++. +|++++. . ..+..+++++.+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l~ 53 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADVK 53 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTCT
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHHh
Confidence 57999999999999999999988777664 7887651 0 1244556664433
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
++|+||+... ++. +...+. +..+.-+++.|++++..
T Consensus 54 ~~DVvIDft~--p~a---~~~~~~--l~~g~~vVigTTG~s~e 89 (243)
T 3qy9_A 54 GADVAIDFSN--PNL---LFPLLD--EDFHLPLVVATTGEKEK 89 (243)
T ss_dssp TCSEEEECSC--HHH---HHHHHT--SCCCCCEEECCCSSHHH
T ss_pred CCCEEEEeCC--hHH---HHHHHH--HhcCCceEeCCCCCCHH
Confidence 9999997764 222 222232 56666556667777654
No 299
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.32 E-value=0.00011 Score=72.45 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=37.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~ 349 (539)
++|.|||+|.||.+++..|++.|. +|+++||++++++.+.+
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~ 183 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVR 183 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 479999999999999999999998 99999999988776643
No 300
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.32 E-value=8.2e-05 Score=76.02 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=62.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|+|+|.+|..++..+...|.+|+++|+++++++.+.+.. |.--. -......++ +.+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~~-------~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRIH-------TRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSSE-------EEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCeeE-------eccCCHHHHHHHHcC
Confidence 5899999999999999999999999999999998877653311 10000 000000111 34568
Q ss_pred cCEEEEcccCChh-HHHHHHHHHHHhCCCCeEEEecC
Q 009256 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 388 aDlVi~avpe~~~-~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+|+||++++.... ...-+.++..+.++++.+|+..+
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 9999998843221 11111234456678888776544
No 301
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.31 E-value=0.00073 Score=68.29 Aligned_cols=70 Identities=24% Similarity=0.110 Sum_probs=52.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------g~~~~~~~~~~l 62 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-----------------------NCAGDATMEALL 62 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-----------------------TCCCCSSHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHHHh
Confidence 4899999999999999999876 78865 8899999877654321 12234455 444
Q ss_pred --CCcCEEEEcccCChhH
Q 009256 386 --KDVDMVIEAVIESVPL 401 (539)
Q Consensus 386 --~~aDlVi~avpe~~~~ 401 (539)
.++|+|++|+|.....
T Consensus 63 ~~~~~D~V~i~tp~~~h~ 80 (354)
T 3db2_A 63 AREDVEMVIITVPNDKHA 80 (354)
T ss_dssp HCSSCCEEEECSCTTSHH
T ss_pred cCCCCCEEEEeCChHHHH
Confidence 5799999999977654
No 302
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.31 E-value=0.00061 Score=68.13 Aligned_cols=95 Identities=15% Similarity=0.139 Sum_probs=61.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+. .+++ +.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~-----------------------~~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY-----------------------GCE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT-----------------------TCE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh-----------------------CCC-cCCHHHH
Confidence 35899999999999999999885 77877 7899998877654321 122 3444 34
Q ss_pred CC--CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
+. ++|+|++|+|..... .+.....+. ...+++.-..+....+
T Consensus 59 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~ 102 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTHA--DLIERFARA--GKAIFCEKPIDLDAER 102 (331)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCSCSSHHH
T ss_pred hcCCCCCEEEEeCCchhHH--HHHHHHHHc--CCcEEEecCCCCCHHH
Confidence 44 799999999976653 333333222 1234443333555554
No 303
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.30 E-value=4.2e-05 Score=73.58 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=34.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 009256 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 347 (539)
+|+|||+|.||.+++..|.+.|. +|+++||++++++.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l 148 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKAL 148 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 79999999999999999999998 999999999876654
No 304
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.30 E-value=0.00041 Score=69.55 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=65.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------eEEEEeCChHH--HHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEY--LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (539)
-||+|+|+ |.+|.+++..|+.... ++.+||+++.. ++...-+++. .... ....+..
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~--------~~~~------~~~~~~~ 90 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED--------CAFP------LLDKVVV 90 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TTCT------TEEEEEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh--------cCcc------CCCcEEE
Confidence 48999996 9999999999988654 89999998643 2221111111 0000 0122334
Q ss_pred cCCc-cCCCCcCEEEEcc--cC------------ChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 379 VLDY-SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 379 ~~~~-~~~~~aDlVi~av--pe------------~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
+++. +++++||+||++. |- +..+.+.+.+.|.++.+++++|+..+..
T Consensus 91 ~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 91 TADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred cCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 4444 7899999999875 21 3345556666788888888865544433
No 305
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.30 E-value=0.00038 Score=71.29 Aligned_cols=86 Identities=17% Similarity=0.213 Sum_probs=60.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|||.|.+|..+|..+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------cee-ccHHHHHhh
Confidence 4899999999999999999999999999999987543321 111 111 123 66789
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
||+|+.+....--+. ++....++++++|+...
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEEECS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEEEcC
Confidence 999999864322111 34456789999887433
No 306
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.29 E-value=0.00019 Score=70.11 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=51.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
+++.|+|+|.+|.+++..|++.|. +|++++|++++.+.+.+.+.. .+ .+... ++ +...
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~-------~~------------~~~~~-~~~~l~~ 186 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA-------YG------------EVKAQ-AFEQLKQ 186 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG-------GS------------CEEEE-EGGGCCS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc-------cC------------CeeEe-eHHHhcC
Confidence 479999999999999999999996 999999999988776554310 01 01111 12 2227
Q ss_pred CcCEEEEcccCCh
Q 009256 387 DVDMVIEAVIESV 399 (539)
Q Consensus 387 ~aDlVi~avpe~~ 399 (539)
++|+||.++|...
T Consensus 187 ~aDiIInaTp~gm 199 (281)
T 3o8q_A 187 SYDVIINSTSASL 199 (281)
T ss_dssp CEEEEEECSCCCC
T ss_pred CCCEEEEcCcCCC
Confidence 8999999998554
No 307
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.24 E-value=0.0007 Score=68.33 Aligned_cols=74 Identities=16% Similarity=0.038 Sum_probs=52.3
Q ss_pred CCCcceEEEEcCCCCcH-HHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 009256 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (539)
Q Consensus 305 ~~~~~kI~iIG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (539)
+++..||+|||+|.||. .++..+.+. +++|+ ++|+++++.+...+.. .+...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF-----------------------GGEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH-----------------------CSEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCCCcCC
Confidence 34446899999999998 788888887 77876 8899998877654321 1222345
Q ss_pred c-cCCC--CcCEEEEcccCChhH
Q 009256 382 Y-SEFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 382 ~-~~~~--~aDlVi~avpe~~~~ 401 (539)
+ +.+. +.|+|++|+|.+...
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h~ 103 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLHA 103 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH
Confidence 5 3343 689999999976653
No 308
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.24 E-value=0.00021 Score=72.50 Aligned_cols=92 Identities=23% Similarity=0.198 Sum_probs=59.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
-++|+|||+|.||..++..|++. ++|+++||++++++.+.+.. ..-.++ +.-..++ +.++
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~--------~~~~~d----------~~~~~~l~~ll~ 76 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFA--------TPLKVD----------ASNFDKLVEVMK 76 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTS--------EEEECC----------TTCHHHHHHHHT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhC--------CeEEEe----------cCCHHHHHHHHh
Confidence 35899999999999999999988 99999999999877653210 000000 0001122 4467
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++|+||.|+|..... .+.. ..+..++.+++.+
T Consensus 77 ~~DvVIn~~P~~~~~--~v~~---a~l~~G~~~vD~s 108 (365)
T 2z2v_A 77 EFELVIGALPGFLGF--KSIK---AAIKSKVDMVDVS 108 (365)
T ss_dssp TCSCEEECCCHHHHH--HHHH---HHHHTTCCEEECC
T ss_pred CCCEEEECCChhhhH--HHHH---HHHHhCCeEEEcc
Confidence 899999999854332 2322 2234555555544
No 309
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.23 E-value=0.00035 Score=67.50 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=50.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
+++.|||+|.||.+++..|++.|.+|++++|++++.+.+. ++ + +.. .+++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------~-------------~~~-~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------G-------------CDC-FMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------T-------------CEE-ESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------C-------------CeE-ecHHHhccC
Confidence 4799999999999999999999999999999998877663 21 0 111 122344589
Q ss_pred CEEEEcccCC
Q 009256 389 DMVIEAVIES 398 (539)
Q Consensus 389 DlVi~avpe~ 398 (539)
|+||.++|..
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999854
No 310
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.21 E-value=0.00047 Score=59.85 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=54.9
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
++|+|||+ |.+|..++.+|.+.||+ +|++|+.+... . ...+....++ +
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~---~----------------------i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE---E----------------------LFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS---E----------------------ETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC---c----------------------CCCEEecCCHHH
Confidence 37999999 89999999999999997 66777652110 0 0123444555 3
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEE
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~ 420 (539)
.-...|+++.++|. +....+++++.+.-.. .+++
T Consensus 67 l~~~vDlavi~vp~--~~~~~v~~~~~~~gi~-~i~~ 100 (140)
T 1iuk_A 67 LKEPVDILDVFRPP--SALMDHLPEVLALRPG-LVWL 100 (140)
T ss_dssp CCSCCSEEEECSCH--HHHTTTHHHHHHHCCS-CEEE
T ss_pred CCCCCCEEEEEeCH--HHHHHHHHHHHHcCCC-EEEE
Confidence 34579999999984 4555666666554333 4544
No 311
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.20 E-value=0.00018 Score=73.21 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=60.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|+|+|+|.+|..++..+...|.+|+++|+++++++.+.+.. +. ... .......+. +.+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----------g~-~~~------~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----------GG-RVI------TLTATEANIKKSVQH 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TT-SEE------EEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----------Cc-eEE------EecCCHHHHHHHHhC
Confidence 5899999999999999999999999999999998876653211 10 000 000000111 34568
Q ss_pred cCEEEEcccCChh-HHHHHHHHHHHhCCCCeEEEecC
Q 009256 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 388 aDlVi~avpe~~~-~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
+|+||.+++.... ....+.++..+.++++.+|+..+
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 9999999974321 11111344556677777766444
No 312
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=97.19 E-value=0.012 Score=62.29 Aligned_cols=145 Identities=15% Similarity=0.058 Sum_probs=95.2
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHH
Q 009256 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (539)
Q Consensus 17 ~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (539)
.|.-+... .-++.....+.+..+++.+.+. .+-+|.|.- |.|+.+.+-... ...+. +.+ .++
T Consensus 111 ~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~s-----l~~~~----~i~-~~~ 174 (548)
T 2bzr_A 111 CIFSQDATVFGGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVVS-----LGLYS----RIF-RNN 174 (548)
T ss_dssp EEEEECTTSGGGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTHH-----HHHHH----HHH-HHH
T ss_pred EEEEEcCccccCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHHH-----HHHHH----HHH-HHH
Confidence 34444443 3799999999999999988765 456777765 456665432110 11111 222 122
Q ss_pred H--hCCCcEEEEEcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCH
Q 009256 95 E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (539)
Q Consensus 95 ~--~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a 171 (539)
. .-..|.|+.+.|+|.||+......||++|+.++ +.+++. |+...+. .+|+.++.
T Consensus 175 ~~~s~~iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~ 232 (548)
T 2bzr_A 175 ILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTM 232 (548)
T ss_dssp HHTTTTSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCH
T ss_pred HHhcCCCcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCCh
Confidence 2 334999999999999999988889999999987 877765 3222222 35778876
Q ss_pred H-----HH--HHcCCcceecCcc-hHHHHHHHHHHH
Q 009256 172 E-----EG--WKLGLIDAVVTSE-ELLKVSRLWALD 199 (539)
Q Consensus 172 ~-----eA--~~~Glv~~vv~~~-~l~~~a~~~a~~ 199 (539)
+ |. .+.|++|.+++++ ++.+.+.++..-
T Consensus 233 e~lggae~h~~~sG~~d~vv~d~~~~~~~~r~lls~ 268 (548)
T 2bzr_A 233 EELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSY 268 (548)
T ss_dssp HHHHBHHHHHHTSSCCSEEESSHHHHHHHHHHHHTT
T ss_pred HhcccHHHHhhccCceeEEeCCHHHHHHHHHHHHHh
Confidence 4 22 3689999999854 455555554433
No 313
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.18 E-value=0.00092 Score=67.24 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=51.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++.+.+.. +.....+++ +.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~----------------------~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKL----------------------GVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHH----------------------TCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHh----------------------CCCceeCCHHHHh
Confidence 4899999999999999999875 67776 7899998877654321 111234455 444
Q ss_pred C--CcCEEEEcccCChh
Q 009256 386 K--DVDMVIEAVIESVP 400 (539)
Q Consensus 386 ~--~aDlVi~avpe~~~ 400 (539)
. ++|+|++|+|....
T Consensus 61 ~~~~~D~V~i~tp~~~h 77 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTH 77 (344)
T ss_dssp HCTTCCEEEECSCGGGH
T ss_pred cCCCCCEEEEcCCCcch
Confidence 4 79999999997654
No 314
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=97.17 E-value=0.01 Score=62.53 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=97.2
Q ss_pred EEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.-+... .-++.....+.+..+++.+.+. .+-+|.|.- |.|+.+.+-... ...+.+.+.... + +
T Consensus 99 v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~-~-~- 164 (523)
T 1on3_A 99 AASQDFTVMGGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV-K-L- 164 (523)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH-H-H-
T ss_pred EEEEcCCccCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH-H-h-
Confidence 3334443 4789999999999999988765 456777764 456666542210 111222222221 1 2
Q ss_pred hCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHH---
Q 009256 96 DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE--- 172 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~--- 172 (539)
.-..|.|+.+.|+|.||+......||++|+.+++.+++. |+...+. .+|+.++.+
T Consensus 165 s~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lg 222 (523)
T 1on3_A 165 SGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELG 222 (523)
T ss_dssp TTTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHH
T ss_pred cCCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcc
Confidence 345999999999999999999999999999999888765 2222211 357778764
Q ss_pred --HHH--HcCCcceecCcc-hHHHHHHHHHHHH
Q 009256 173 --EGW--KLGLIDAVVTSE-ELLKVSRLWALDI 200 (539)
Q Consensus 173 --eA~--~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (539)
|.+ +.|++|.+++++ ++.+.+.++..-+
T Consensus 223 gae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~l 255 (523)
T 1on3_A 223 GAEAHMAISGNIHFVAEDDDAAELIAKKLLSFL 255 (523)
T ss_dssp SHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTS
T ss_pred cHHHHhhccCceEEEeCCHHHHHHHHHHHHHhc
Confidence 323 689999999854 5666666665444
No 315
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.16 E-value=0.0017 Score=64.60 Aligned_cols=70 Identities=20% Similarity=0.072 Sum_probs=50.1
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc-ccCCccCC
Q 009256 309 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~-~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~ 385 (539)
.||+|||+|.||. .++..+.+. +++|+++|+++++.+.+.+.. + .-. +.++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~----------g------------~~~~~~~~~~~l 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRY----------R------------VSATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHT----------T------------CCCCCSSTTGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHc----------C------------CCccccCHHHHh
Confidence 4899999999998 488888764 778889999998877653321 1 001 22333555
Q ss_pred -CCcCEEEEcccCChh
Q 009256 386 -KDVDMVIEAVIESVP 400 (539)
Q Consensus 386 -~~aDlVi~avpe~~~ 400 (539)
.++|+|++|+|....
T Consensus 61 ~~~~D~V~i~tp~~~h 76 (323)
T 1xea_A 61 QYGVDAVMIHAATDVH 76 (323)
T ss_dssp GGCCSEEEECSCGGGH
T ss_pred hcCCCEEEEECCchhH
Confidence 689999999996553
No 316
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=97.16 E-value=0.02 Score=60.50 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=95.7
Q ss_pred EEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.-|... .-++.+...+.+..+++.+.+. .+-+|.|.-.| |+.+.+-.+... ....+...+..+. .+.
T Consensus 125 V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSg-----GARl~~q~~~~~--~~~~~~~i~~~~~--~ls 194 (555)
T 3u9r_B 125 IVGNDATVKGGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSG-----GANLPRQDEVFP--DREHFGRIFFNQA--NMS 194 (555)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----CBCGGGGGGTSS--STTSTTHHHHHHH--HHH
T ss_pred EEEECCccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----CCCCCCcceeec--ccccHHHHHHHHH--HHh
Confidence 3334443 3789999999999999988766 45567665433 333321111000 0112233332222 366
Q ss_pred hCCCcEEEEEcCccccchhHhhhccCEEEeeC-CceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHHHH
Q 009256 96 DCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG 174 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA 174 (539)
....|+|+.|.|.|.|||......||++|+.+ ++.+++ -|+...+ ..+|+.+++++.
T Consensus 195 ~~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i~~--------------------aGP~vik--~~~ge~~~~e~L 252 (555)
T 3u9r_B 195 ARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFL--------------------AGPPLVK--AATGEVVSAEEL 252 (555)
T ss_dssp HTTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHH
T ss_pred cCCCCEEEEEecCCCccHHHHHHhCCceEEecCCceEEE--------------------ccHHHHH--HHhcCccChhhc
Confidence 77899999999999999999999999998875 454433 1222111 157899999988
Q ss_pred -------HHcCCcceecCcch-HHHHHHHHHHH
Q 009256 175 -------WKLGLIDAVVTSEE-LLKVSRLWALD 199 (539)
Q Consensus 175 -------~~~Glv~~vv~~~~-l~~~a~~~a~~ 199 (539)
...|++|.++++++ ....++++...
T Consensus 253 GGa~~h~~~sGv~d~v~~de~~a~~~~r~~ls~ 285 (555)
T 3u9r_B 253 GGADVHCKVSGVADHYAEDDDHALAIARRCVAN 285 (555)
T ss_dssp HBHHHHHHTTCSCSEEESSHHHHHHHHHHHHHT
T ss_pred cchhhhhhccCceeEEeCCHHHHHHHHHHHHHh
Confidence 78999999998764 33444444433
No 317
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.13 E-value=0.00049 Score=66.89 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=37.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
++|.|+|+|.||.+++..|++.|.+|+++||++++++.+.+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~ 161 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAER 161 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 479999999999999999999999999999999887776543
No 318
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.11 E-value=0.0012 Score=66.80 Aligned_cols=70 Identities=23% Similarity=0.164 Sum_probs=50.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
..||+|||+|.||...+..+.+. +++|+ ++|+++++.+.+. +. .+...+++ +.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~-------------g~~~~~~~~~l 60 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QK-------------GLKIYESYEAV 60 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TT-------------TCCBCSCHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hc-------------CCceeCCHHHH
Confidence 35899999999999999988876 67776 6799998765321 11 13344555 33
Q ss_pred CC--CcCEEEEcccCChhH
Q 009256 385 FK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~ 401 (539)
+. ++|+|++|+|.....
T Consensus 61 l~~~~~D~V~i~tp~~~h~ 79 (359)
T 3e18_A 61 LADEKVDAVLIATPNDSHK 79 (359)
T ss_dssp HHCTTCCEEEECSCGGGHH
T ss_pred hcCCCCCEEEEcCCcHHHH
Confidence 43 799999999976643
No 319
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.10 E-value=0.001 Score=66.26 Aligned_cols=70 Identities=19% Similarity=0.116 Sum_probs=50.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.+|+|||+|.||..++..+.+. +++++ ++|+++++.+...+. . +.....+++ +.+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~----------~------------~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASR----------Y------------QNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGG----------S------------SSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHH----------c------------CCCeEeCCHHHHh
Confidence 4899999999999999999886 56764 889999876654211 0 112334555 445
Q ss_pred -CCcCEEEEcccCChh
Q 009256 386 -KDVDMVIEAVIESVP 400 (539)
Q Consensus 386 -~~aDlVi~avpe~~~ 400 (539)
.++|+|++++|....
T Consensus 60 ~~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLH 75 (325)
T ss_dssp TSSCSEEEECSCGGGH
T ss_pred CCCCCEEEEeCChHHH
Confidence 689999999996653
No 320
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.10 E-value=0.00089 Score=66.44 Aligned_cols=68 Identities=21% Similarity=0.105 Sum_probs=49.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
..||+|||+|.||..++..+.+. ++++ .++|+++++.+.+.+ .+...+++ +.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------------------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------------------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------------------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------------------------hCcccCCHHHH
Confidence 35899999999999999999885 6765 489999876554311 02234455 44
Q ss_pred CC--CcCEEEEcccCChh
Q 009256 385 FK--DVDMVIEAVIESVP 400 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~ 400 (539)
++ ++|+|++++|....
T Consensus 65 l~~~~~D~V~i~tp~~~h 82 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATH 82 (315)
T ss_dssp HTCTTCCEEEEESCGGGH
T ss_pred hhCCCCCEEEEeCChHHH
Confidence 43 79999999996654
No 321
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.07 E-value=0.0012 Score=63.92 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=50.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
++|.|||+|-+|.+++..|...|. +|++++|++++.+.+.+.+ + .....+.. +.+
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~----------~-------------~~~~~~~~-~~~ 175 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY----------G-------------YAYINSLE-NQQ 175 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH----------T-------------CEEESCCT-TCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------C-------------Cccchhhh-ccc
Confidence 479999999999999999999997 8999999998877764432 0 01111122 467
Q ss_pred cCEEEEcccCCh
Q 009256 388 VDMVIEAVIESV 399 (539)
Q Consensus 388 aDlVi~avpe~~ 399 (539)
+|+||.++|...
T Consensus 176 ~DivInaTp~gm 187 (271)
T 1npy_A 176 ADILVNVTSIGM 187 (271)
T ss_dssp CSEEEECSSTTC
T ss_pred CCEEEECCCCCc
Confidence 999999998443
No 322
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=97.06 E-value=0.016 Score=61.06 Aligned_cols=153 Identities=14% Similarity=0.081 Sum_probs=99.5
Q ss_pred CcEEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHH
Q 009256 13 DGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELV 90 (539)
Q Consensus 13 ~~v~~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 90 (539)
+.-..|.-+... .-++.....+.+..+++.+.+. .+-+|.|+. |.|+.+.+-... ...+.+.+....
T Consensus 90 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~ 158 (522)
T 1x0u_A 90 GRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV 158 (522)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH
T ss_pred CEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH
Confidence 333334444443 3789999999999999988765 466777775 456666542210 111222222221
Q ss_pred HHHHHhCCCcEEEEEcCccccchhHhhhccCEEEeeCC-c-eEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCC
Q 009256 91 VNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKS 168 (539)
Q Consensus 91 ~~~i~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~-a-~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~ 168 (539)
+ ..-..|.|+.+.|+|.||+......||++|+.++ + .+++. |+...+. .+|+.
T Consensus 159 -~--~s~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP~vI~~--~~ge~ 213 (522)
T 1x0u_A 159 -M--ASGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GPEITKV--VLGEE 213 (522)
T ss_dssp -H--HTTTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CHHHHHH--TTCCC
T ss_pred -H--hCCCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CHHHHHH--HhCCc
Confidence 1 2345999999999999999999999999999987 7 77652 2211111 46777
Q ss_pred CCHH-----HHH--HcCCcceecCc-chHHHHHHHHHHHHH
Q 009256 169 ITSE-----EGW--KLGLIDAVVTS-EELLKVSRLWALDIA 201 (539)
Q Consensus 169 ~~a~-----eA~--~~Glv~~vv~~-~~l~~~a~~~a~~la 201 (539)
++.+ |.+ +.|++|.++++ .++.+.+.++..-+-
T Consensus 214 ~~~e~lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp 254 (522)
T 1x0u_A 214 VSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLP 254 (522)
T ss_dssp CCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSC
T ss_pred CChhhcchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhcc
Confidence 7764 223 68999999985 457676666665554
No 323
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.06 E-value=0.001 Score=67.25 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=36.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (539)
++|+|+|+|.||..+|..|...|.+|+++|+++++++...
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a 213 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV 213 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 4799999999999999999999999999999998776553
No 324
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=97.04 E-value=0.00031 Score=73.08 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=45.4
Q ss_pred ccchhhcchHHHHHHHHHHHHcCC--CHHHHHHHH-HhCCCCc---chhhccccCC
Q 009256 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQEGGCWS 539 (539)
Q Consensus 490 ~g~v~nrl~~~~~~Ea~~l~~~G~--~~~~id~a~-~~~g~~~---Gpf~~~d~~~ 539 (539)
...+..|++++++||+..++++|| +++|||.++ .|+|||. |||+++|.++
T Consensus 355 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G 410 (460)
T 3k6j_A 355 DQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEG 410 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBS
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhC
Confidence 346889999999999999999997 699999999 8999987 9999999764
No 325
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.04 E-value=0.002 Score=64.67 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=50.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHH-H-CCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 009256 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~-~-~G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 382 (539)
++.+|+|||+|.||..++..+. + .|++| .++|+++++++.+.+. .| .....+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~----------~g------------~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNE----------LG------------VETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHT----------TC------------CSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHH----------hC------------CCcccCCHH
Confidence 3458999999999999999988 4 47775 5789999887654321 01 11223445
Q ss_pred cCCC--CcCEEEEcccCChh
Q 009256 383 SEFK--DVDMVIEAVIESVP 400 (539)
Q Consensus 383 ~~~~--~aDlVi~avpe~~~ 400 (539)
+.+. ++|+|++|+|....
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHhH
Confidence 3343 69999999996654
No 326
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.03 E-value=0.0021 Score=66.29 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=37.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (539)
++|.|+|.|.+|..++..|.+.|++|+++|.|++.++.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 3699999999999999999999999999999999888763
No 327
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.02 E-value=0.00097 Score=64.74 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (539)
++|.|+|+|.||.+++..|++.|.+|+++||++++++.+.+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~ 160 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK 160 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 47999999999999999999999999999999988776644
No 328
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.02 E-value=0.0018 Score=56.38 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=54.1
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
++|+|||+ |.+|..++.+|.+.||+ +|++|+.. +.. ..+....++ +
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i--------------------------~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV--------------------------LGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE--------------------------TTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE--------------------------CCeeccCCHHH
Confidence 47999999 79999999999999997 56666542 100 123444555 3
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEE
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~ 420 (539)
....+|+++.++|. +....++.++.+.-. ..++.
T Consensus 74 l~~~vDlvvi~vp~--~~~~~vv~~~~~~gi-~~i~~ 107 (144)
T 2d59_A 74 IPDKIEVVDLFVKP--KLTMEYVEQAIKKGA-KVVWF 107 (144)
T ss_dssp CSSCCSEEEECSCH--HHHHHHHHHHHHHTC-SEEEE
T ss_pred cCCCCCEEEEEeCH--HHHHHHHHHHHHcCC-CEEEE
Confidence 34579999999994 555677776655432 34543
No 329
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.01 E-value=0.0024 Score=63.69 Aligned_cols=69 Identities=19% Similarity=0.105 Sum_probs=49.3
Q ss_pred eEEEEcCCCCcHHH-HHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 310 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 310 kI~iIG~G~mG~~i-A~~l~~~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
||+|||+|.||..+ +..+.+.|++|+ ++|+++++.+...+.. + .....+++ +.+.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~----------g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATEN----------G------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHT----------T------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHc----------C------------CCcccCCHHHHhc
Confidence 79999999999998 778877788866 7899998876553311 1 11233455 3344
Q ss_pred --CcCEEEEcccCChh
Q 009256 387 --DVDMVIEAVIESVP 400 (539)
Q Consensus 387 --~aDlVi~avpe~~~ 400 (539)
++|+|++++|....
T Consensus 60 ~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 60 DPDVDAVYVSTTNELH 75 (332)
T ss_dssp CTTCCEEEECSCGGGH
T ss_pred CCCCCEEEEeCChhHh
Confidence 59999999996654
No 330
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.99 E-value=0.0016 Score=65.49 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=51.7
Q ss_pred ceEEEEcCCCCcHHHHHHHH-H-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.||+|||+|.||..++..+. + .+++|+ ++|+++++++...+.. +. .....+++ +.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~----------g~-----------~~~~~~~~~~l 61 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQY----------QL-----------NATVYPNDDSL 61 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHT----------TC-----------CCEEESSHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh----------CC-----------CCeeeCCHHHH
Confidence 48999999999999999998 4 477766 7899998877653321 10 12344555 33
Q ss_pred CC--CcCEEEEcccCChhH
Q 009256 385 FK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~ 401 (539)
+. ++|+|++|+|.....
T Consensus 62 l~~~~~D~V~i~tp~~~h~ 80 (344)
T 3mz0_A 62 LADENVDAVLVTSWGPAHE 80 (344)
T ss_dssp HHCTTCCEEEECSCGGGHH
T ss_pred hcCCCCCEEEECCCchhHH
Confidence 43 499999999976653
No 331
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.97 E-value=0.00053 Score=70.63 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=51.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+|||+|.||..++..+...|. +|+++|+++++.+...+.+ |. ..+. ..++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 489999999999999999999998 9999999998765443221 10 0011 1122 4457
Q ss_pred CcCEEEEcccCChh
Q 009256 387 DVDMVIEAVIESVP 400 (539)
Q Consensus 387 ~aDlVi~avpe~~~ 400 (539)
++|+||++++....
T Consensus 227 ~aDvVi~at~~~~~ 240 (404)
T 1gpj_A 227 RSDVVVSATAAPHP 240 (404)
T ss_dssp TCSEEEECCSSSSC
T ss_pred CCCEEEEccCCCCc
Confidence 89999999986543
No 332
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.94 E-value=0.00038 Score=69.57 Aligned_cols=98 Identities=18% Similarity=0.147 Sum_probs=63.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--e-----EEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~--~-----V~~~d~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (539)
.||+|+| +|.+|.+++..|+..|+ + ++++|+++ +.++.....+.+ .... ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~--------~~~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD--------CALP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TCCT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh--------hhhc------ccCCEEE
Confidence 5899999 79999999999998886 6 99999975 233332222211 0000 0022333
Q ss_pred cCC-ccCCCCcCEEEEcc--cC------------ChhHHHHHHHHHHHhCCCCeEEE
Q 009256 379 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA 420 (539)
Q Consensus 379 ~~~-~~~~~~aDlVi~av--pe------------~~~~~~~~~~~l~~~~~~~~ii~ 420 (539)
.++ ++++++||+||.+. |. +....+.+.+.+.++.+++..++
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi 126 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI 126 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 444 47899999999875 21 23455666677888887775333
No 333
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.93 E-value=0.0023 Score=64.66 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=52.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHH-H-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhh-cccccCCc
Q 009256 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDY 382 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~ 382 (539)
...||+|||+|.||..++..+. + .+++|+ ++|+++++++...+.. + .....+++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~----------------------g~~~~~~~~~ 79 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY----------------------AIEAKDYNDY 79 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH----------------------TCCCEEESSH
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh----------------------CCCCeeeCCH
Confidence 3458999999999999999998 4 477866 7899999877664321 1 12334555
Q ss_pred -cCCC--CcCEEEEcccCChhH
Q 009256 383 -SEFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 383 -~~~~--~aDlVi~avpe~~~~ 401 (539)
+.+. ++|+|++|+|.....
T Consensus 80 ~~ll~~~~~D~V~i~tp~~~h~ 101 (357)
T 3ec7_A 80 HDLINDKDVEVVIITASNEAHA 101 (357)
T ss_dssp HHHHHCTTCCEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEcCCcHHHH
Confidence 3343 689999999976653
No 334
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.93 E-value=0.002 Score=67.08 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
++|+|+|+|.+|.++|..|+..|.+|+++|+++...+.+.. .+ ....+..+.+..+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv~~lee~~~~a 321 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQVLTLEDVVSEA 321 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECCGGGTTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------CccCCHHHHHHhc
Confidence 47999999999999999999999999999999887655422 11 1112112567889
Q ss_pred CEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 389 DlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
|+|+++......+.. +..+.++++.+|+....
T Consensus 322 DvVi~atG~~~vl~~----e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 322 DIFVTTTGNKDIIML----DHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp SEEEECSSCSCSBCH----HHHTTSCTTEEEEESSS
T ss_pred CEEEeCCCChhhhhH----HHHHhcCCCeEEEEcCC
Confidence 999988753322222 23456788888865443
No 335
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.87 E-value=0.00083 Score=65.56 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=38.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i 351 (539)
+++.|+|+|-+|.+++..|++.|. +|++++|++++.+.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999888776554
No 336
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.86 E-value=0.0018 Score=62.72 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=37.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~ 350 (539)
+++.|+|+|-+|.+++..|++.|. +|++++|++++.+.+.+.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~ 163 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNE 163 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 589999999999999999999996 999999999988776543
No 337
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.86 E-value=0.0009 Score=66.86 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=49.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . +.-...+++ +
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~-----------~-----------~~~~~~~~~~~ 61 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANK-----------Y-----------HLPKAYDKLED 61 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---C-----------C-----------CCSCEESCHHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHH-----------c-----------CCCcccCCHHH
Confidence 446899999999999999988775 45655 779998876554221 0 111234555 4
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. ++|+|++++|.....
T Consensus 62 ll~~~~~D~V~i~tp~~~h~ 81 (329)
T 3evn_A 62 MLADESIDVIYVATINQDHY 81 (329)
T ss_dssp HHTCTTCCEEEECSCGGGHH
T ss_pred HhcCCCCCEEEECCCcHHHH
Confidence 444 799999999976643
No 338
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.85 E-value=0.00013 Score=70.94 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~ 346 (539)
++|.|+|+|.||.+++..|.+.|. +|++++|++++.+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 479999999999999999999999 99999999876554
No 339
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.82 E-value=0.0023 Score=64.52 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=62.3
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCC--e---EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC-
Q 009256 308 VRKVAVIG-GGLMGSGIATAHILNNI--Y---VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL- 380 (539)
Q Consensus 308 ~~kI~iIG-~G~mG~~iA~~l~~~G~--~---V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~- 380 (539)
..||+||| +|.+|.+++..++..+. + |.++|.+.+..+...+...-.+ ...... ....+...+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL----~h~~~p------~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL----EDSLYP------LLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH----HTTTCT------TEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhH----Hhhhhh------hcCCcEEecC
Confidence 35899999 79999999999999875 3 8887665443222222111111 111100 001233333
Q ss_pred CccCCCCcCEEEEccc--C------------ChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 381 DYSEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 381 ~~~~~~~aDlVi~avp--e------------~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
+++++++||+||.+.. - +..+.+.+...+.++..++++++..+.
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 4589999999998752 1 223444455557777566776665453
No 340
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.81 E-value=0.0026 Score=62.75 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=50.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
.||+|||+|.||..++..+.+ .+++|+ ++|+++++++. .|. .....+++....
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~-----------~~~~~~~l~~~~ 64 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ-----------PFRVVSDIEQLE 64 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT-----------TSCEESSGGGSS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC-----------CcCCHHHHHhCC
Confidence 489999999999999999987 467887 78999875432 110 011123333337
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEec
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ 422 (539)
++|+||+|+|..... .... ..+..+.-+++.
T Consensus 65 ~~DvViiatp~~~h~--~~~~---~al~aG~~Vi~e 95 (304)
T 3bio_A 65 SVDVALVCSPSREVE--RTAL---EILKKGICTADS 95 (304)
T ss_dssp SCCEEEECSCHHHHH--HHHH---HHHTTTCEEEEC
T ss_pred CCCEEEECCCchhhH--HHHH---HHHHcCCeEEEC
Confidence 899999999855432 3333 333445545443
No 341
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.74 E-value=0.00075 Score=74.49 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=43.4
Q ss_pred hhhcchHHHHHHHHHHHHcCC--CHHHHHHHH-HhCCCCc---chhhccccCC
Q 009256 493 AVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQEGGCWS 539 (539)
Q Consensus 493 v~nrl~~~~~~Ea~~l~~~G~--~~~~id~a~-~~~g~~~---Gpf~~~d~~~ 539 (539)
+..|++++++||+.+++++|| ++.|||.+| .|+|||. |||+++|.++
T Consensus 638 i~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G 690 (742)
T 3zwc_A 638 ILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVG 690 (742)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHH
Confidence 678999999999999999997 899999999 8999998 9999999753
No 342
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.73 E-value=0.01 Score=62.71 Aligned_cols=164 Identities=14% Similarity=0.122 Sum_probs=102.5
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.-|+|.. -.++.+..+.+.+.++.+... .+-+|.|.-.+ .|..|.+-... .........+ .++.
T Consensus 329 via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~-G~~~G~~~E~~----------G~~~~~Ak~l-~~~~ 395 (522)
T 1x0u_A 329 IVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTP-GYVPGTDQEYK----------GIIRHGAKML-YAFA 395 (522)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCSHHHHHT----------THHHHHHHHH-HHHH
T ss_pred EEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCC-CCCCchHHHHH----------HHHHHHHHHH-HHHH
Confidence 33455542 689999999999999988764 56677775332 24444321110 1112233455 5688
Q ss_pred hCCCcEEEEEcCccccchhHhhh----ccCEEEeeCCceEeCCcccCCCCCCcchhhccccc-c---------CHHHHHH
Q 009256 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-V---------GLSKAIE 161 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-v---------G~~~a~~ 161 (539)
+...|.|+.|-|.|.|||..... .+|+++|.++|.+++-. +-|....+-+. + -.....+
T Consensus 396 ~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~g-------pegaa~Il~r~~i~~~~d~~~~~~~l~~~ 468 (522)
T 1x0u_A 396 EATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTG-------PEGAVRILYRKEIQQASNPDDVLKQRIAE 468 (522)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSC-------HHHHHHHHTSSSSSSSSSSSSSSHHHHHH
T ss_pred hCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEecC-------HHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence 99999999999999999874443 49999999998887532 12222222111 1 1111111
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 009256 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (539)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (539)
+ .-..-++..+.+.|+||.|+++.++.+......+.+...
T Consensus 469 y--~~~~~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~~~ 508 (522)
T 1x0u_A 469 Y--RKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKTK 508 (522)
T ss_dssp H--HHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred H--HHhcCCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHhhc
Confidence 1 011235678999999999999998887777766666443
No 343
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.72 E-value=0.0041 Score=62.87 Aligned_cols=74 Identities=15% Similarity=0.089 Sum_probs=50.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
+.+|+|||+|.||..++..+.+. ++++ .++|+++++.+...+.. + +. ......+++ +.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~----------~-~~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATAN----------N-YP--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT----------T-CC--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh----------C-CC--------CCCeeeCCHHHH
Confidence 35899999999999999998875 5666 58899998776553321 1 00 012234455 33
Q ss_pred CC--CcCEEEEcccCChh
Q 009256 385 FK--DVDMVIEAVIESVP 400 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~ 400 (539)
+. ++|+|++++|....
T Consensus 67 l~~~~~D~V~i~tp~~~h 84 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLH 84 (362)
T ss_dssp HHCTTCCEEEECCCGGGH
T ss_pred hcCCCCCEEEEcCChHHH
Confidence 43 69999999996654
No 344
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.71 E-value=0.00066 Score=69.76 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
.+|+|||+|.+|..++..+...|.+|+++|+++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 489999999999999999999999999999999877665
No 345
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.71 E-value=0.0014 Score=66.49 Aligned_cols=73 Identities=26% Similarity=0.249 Sum_probs=49.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
-+||.|+|+|.+|+.++..|++ .++|+++|++.++++++.+. ...-.++..+ ..++ +.++
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~--------~~~~~~d~~d----------~~~l~~~~~ 76 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF--------ATPLKVDASN----------FDKLVEVMK 76 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT--------SEEEECCTTC----------HHHHHHHHT
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc--------CCcEEEecCC----------HHHHHHHHh
Confidence 3489999999999999998865 58999999999887765321 0000011000 0111 4468
Q ss_pred CcCEEEEcccCCh
Q 009256 387 DVDMVIEAVIESV 399 (539)
Q Consensus 387 ~aDlVi~avpe~~ 399 (539)
++|+||.|+|...
T Consensus 77 ~~DvVi~~~p~~~ 89 (365)
T 3abi_A 77 EFELVIGALPGFL 89 (365)
T ss_dssp TCSEEEECCCGGG
T ss_pred CCCEEEEecCCcc
Confidence 9999999998653
No 346
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.69 E-value=0.0018 Score=64.76 Aligned_cols=71 Identities=15% Similarity=0.019 Sum_probs=51.1
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~-~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.+|+|||+|.+|. .++..+...|++| .++|+++++.+.+.+.. +.....+++ +.+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~----------------------~~~~~~~~~~~ll 62 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLF----------------------PSVPFAASAEQLI 62 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHS----------------------TTCCBCSCHHHHH
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhc----------------------CCCcccCCHHHHh
Confidence 4899999999996 6777777778986 58899998876653321 123345555 334
Q ss_pred C--CcCEEEEcccCChhH
Q 009256 386 K--DVDMVIEAVIESVPL 401 (539)
Q Consensus 386 ~--~aDlVi~avpe~~~~ 401 (539)
. +.|+|++|+|.+...
T Consensus 63 ~~~~~D~V~i~tp~~~h~ 80 (336)
T 2p2s_A 63 TDASIDLIACAVIPCDRA 80 (336)
T ss_dssp TCTTCCEEEECSCGGGHH
T ss_pred hCCCCCEEEEeCChhhHH
Confidence 3 699999999976653
No 347
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.69 E-value=0.0016 Score=65.97 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=49.9
Q ss_pred cceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
..||+|||+|.||.. ++..+.+. +++|+ ++|+++++++.+.+. .+.....+++ +
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~ 62 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRF----------------------ISDIPVLDNVPA 62 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGT----------------------SCSCCEESSHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHh----------------------cCCCcccCCHHH
Confidence 458999999999985 88888775 67876 889999886654221 0123345566 3
Q ss_pred CCC--CcCEEEEcccCChh
Q 009256 384 EFK--DVDMVIEAVIESVP 400 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~ 400 (539)
.+. +.|+|++|+|....
T Consensus 63 ll~~~~vD~V~i~tp~~~H 81 (359)
T 3m2t_A 63 MLNQVPLDAVVMAGPPQLH 81 (359)
T ss_dssp HHHHSCCSEEEECSCHHHH
T ss_pred HhcCCCCCEEEEcCCcHHH
Confidence 344 56999999995543
No 348
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.67 E-value=0.0019 Score=61.78 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCCh
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (539)
++|.|||+|.+|+.++..|+..|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 379999999999999999999997 999999997
No 349
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.66 E-value=0.007 Score=62.84 Aligned_cols=78 Identities=15% Similarity=0.060 Sum_probs=52.2
Q ss_pred CCcceEEEEcCCCCcH-HHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~-~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+...||+|||+|.||. .++..+.+. +++| .++|+++++.+...+.. +. .. ..+...+++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~----------g~-~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEY----------GV-DP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHT----------TC-CG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh----------CC-Cc-------ccccccCCH
Confidence 4445899999999997 899888765 5675 58899998876553321 10 00 012234566
Q ss_pred -cCCC--CcCEEEEcccCChhH
Q 009256 383 -SEFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 383 -~~~~--~aDlVi~avpe~~~~ 401 (539)
+.+. ++|+|++|+|.....
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h~ 164 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLHA 164 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEcCCchhHH
Confidence 4444 799999999976643
No 350
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.64 E-value=0.012 Score=55.32 Aligned_cols=70 Identities=20% Similarity=0.143 Sum_probs=49.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|.|.|+ |.+|..++..|++.|++|++++|+++..+..... +.... ....++ .++ +.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-----------~~~~~-----~~~Dl~--~~~~~~~~ 83 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-----------GASDI-----VVANLE--EDFSHAFA 83 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-----------TCSEE-----EECCTT--SCCGGGGT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-----------CCceE-----EEcccH--HHHHHHHc
Confidence 58999997 9999999999999999999999999876654220 10000 001111 333 6678
Q ss_pred CcCEEEEccc
Q 009256 387 DVDMVIEAVI 396 (539)
Q Consensus 387 ~aDlVi~avp 396 (539)
++|+||.+..
T Consensus 84 ~~D~vi~~ag 93 (236)
T 3e8x_A 84 SIDAVVFAAG 93 (236)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 9999998875
No 351
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.64 E-value=0.0013 Score=66.76 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=61.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (539)
++|.|+|+|.+|..++..+...|.+|+++|+++++++.+.+... ..+..-..+. .+. +.+.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----~~~~~~~~~~-------------~~~~~~~~~ 230 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRVELLYSNS-------------AEIETAVAE 230 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGSEEEECCH-------------HHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----ceeEeeeCCH-------------HHHHHHHcC
Confidence 68999999999999999999999999999999998877643210 0000000000 011 34568
Q ss_pred cCEEEEcccCChhHHHH-HHHHHHHhCCCCeEEEecC
Q 009256 388 VDMVIEAVIESVPLKQK-IFSELEKACPPHCILATNT 423 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~-~~~~l~~~~~~~~ii~s~t 423 (539)
+|+||++++........ +.++..+.++++.++++..
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99999999642210000 1123345567777766544
No 352
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.62 E-value=0.0024 Score=62.48 Aligned_cols=75 Identities=16% Similarity=0.159 Sum_probs=51.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
+++.|+|+|.+|.+++..|++.| +|++++|++++++.+.+.+.... ... . . -.+...+-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~----~~~---~-~-----~~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL----NKK---F-G-----EEVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH----TCC---H-H-----HHEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc----ccc---c-c-----eeEEEeeHHHhhCCC
Confidence 47999999999999999999999 99999999988777655432110 000 0 0 001111112567889
Q ss_pred CEEEEcccC
Q 009256 389 DMVIEAVIE 397 (539)
Q Consensus 389 DlVi~avpe 397 (539)
|+||.+++.
T Consensus 195 DilVn~ag~ 203 (287)
T 1nvt_A 195 DIIINATPI 203 (287)
T ss_dssp CEEEECSCT
T ss_pred CEEEECCCC
Confidence 999998873
No 353
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.62 E-value=0.0028 Score=63.79 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=51.5
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
++|-||||||+|.||.. .+..+.+. +.+|+ ++|+++++++...++. +.-...+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~----------------------g~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRF----------------------SVPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHH----------------------TCSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------------------CCCeeeCCH
Confidence 45679999999999976 45666654 66776 7899999887764432 112334566
Q ss_pred c-CC--CCcCEEEEcccCChhH
Q 009256 383 S-EF--KDVDMVIEAVIESVPL 401 (539)
Q Consensus 383 ~-~~--~~aDlVi~avpe~~~~ 401 (539)
+ .+ .+.|+|++|+|.....
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEeCCCchhH
Confidence 3 33 4689999999976654
No 354
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.61 E-value=0.0051 Score=59.61 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=35.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
++||.|.|+|.+|+.++..|+++|++|++++|+++..+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 44 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI 44 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhH
Confidence 4689999999999999999999999999999998765543
No 355
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.56 E-value=0.001 Score=73.48 Aligned_cols=50 Identities=14% Similarity=0.232 Sum_probs=45.6
Q ss_pred ccchhhcchHHHHHHHHHHHHcCC--CHHHHHHHH-HhCCCCc---chhhccccCC
Q 009256 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQEGGCWS 539 (539)
Q Consensus 490 ~g~v~nrl~~~~~~Ea~~l~~~G~--~~~~id~a~-~~~g~~~---Gpf~~~d~~~ 539 (539)
.+.+.+|++++++||+..++++|| +++|||.+| .|+|||. |||+++|.++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G 679 (715)
T 1wdk_A 624 DEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIG 679 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhC
Confidence 457889999999999999999997 899999999 7999999 9999999653
No 356
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.56 E-value=0.001 Score=73.56 Aligned_cols=50 Identities=20% Similarity=0.256 Sum_probs=45.5
Q ss_pred ccchhhcchHHHHHHHHHHHHcCC--CHHHHHHHH-HhCCCCc---chhhccccCC
Q 009256 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQEGGCWS 539 (539)
Q Consensus 490 ~g~v~nrl~~~~~~Ea~~l~~~G~--~~~~id~a~-~~~g~~~---Gpf~~~d~~~ 539 (539)
.+.+.+|++++++||+..++++|| +++|||.+| .|+|||. |||+++|.++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G 679 (725)
T 2wtb_A 624 EKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIG 679 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhC
Confidence 356889999999999999999997 899999999 7999999 9999999653
No 357
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.53 E-value=0.0066 Score=60.61 Aligned_cols=71 Identities=11% Similarity=0.036 Sum_probs=50.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC---Ce-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G---~~-V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.||+|||+|.||..++..+.+.+ ++ |.++|+++++++...+.. +.-...+++ +
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~----------------------~~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKH----------------------DIPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHH----------------------TCSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHc----------------------CCCcccCCHHH
Confidence 48999999999999999887654 34 557899998877664421 111234555 3
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. ++|+|++++|.....
T Consensus 61 ll~~~~vD~V~i~tp~~~H~ 80 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK 80 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH
T ss_pred HhcCCCCCEEEECCCcHHHH
Confidence 343 699999999977653
No 358
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.51 E-value=0.0018 Score=63.01 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 347 (539)
+++.|+|+|-+|.+++..|.+.|. +|++++|++++++.+
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 489999999999999999999998 999999999887665
No 359
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.46 E-value=0.0016 Score=66.66 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
++|+|+|+|.+|...+..+...|.+|+++|+++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 489999999999999999999999999999998876655
No 360
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.41 E-value=0.0014 Score=68.45 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=36.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
+++|.|+|+|.+|..++..|++.|++|+++|+++++++.+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~l 42 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKL 42 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHH
Confidence 4689999999999999999999999999999998876554
No 361
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.40 E-value=0.014 Score=54.49 Aligned_cols=129 Identities=13% Similarity=0.150 Sum_probs=76.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
++|.|||+|.+|..-+..|++.|.+|++++.+... ++.+ .+.+.+. .+...-..+.+.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l-----------~~~~~i~---------~i~~~~~~~dL~~ 91 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEW-----------EAKGQLR---------VKRKKVGEEDLLN 91 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHH-----------HHTTSCE---------EECSCCCGGGSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH-----------HHcCCcE---------EEECCCCHhHhCC
Confidence 57999999999999999999999999999876431 2221 2222211 1111112256889
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhhccCCCCcEEEeccCCCC--CCCCeeeeecCCCCc
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTS 465 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i~~~~~~~~r~vg~h~~~p~--~~~~~vei~~~~~t~ 465 (539)
+|+||.+. ++.++...+ ...++.+. .+ |...-+ +. ..|+.|. ..+++..-+.+.+.+
T Consensus 92 adLVIaAT-~d~~~N~~I----~~~ak~gi-~V-NvvD~p-----------~~---~~f~~Paiv~rg~l~iaIST~G~s 150 (223)
T 3dfz_A 92 VFFIVVAT-NDQAVNKFV----KQHIKNDQ-LV-NMASSF-----------SD---GNIQIPAQFSRGRLSLAISTDGAS 150 (223)
T ss_dssp CSEEEECC-CCTHHHHHH----HHHSCTTC-EE-EC----------------C---CSEECCEEEEETTEEEEEECTTSC
T ss_pred CCEEEECC-CCHHHHHHH----HHHHhCCC-EE-EEeCCc-----------cc---CeEEEeeEEEeCCEEEEEECCCCC
Confidence 99999765 455554443 33344343 33 222111 10 1122222 234566666777789
Q ss_pred HHHHHHHHHHHHH
Q 009256 466 AQVILDLMTVGKI 478 (539)
Q Consensus 466 ~e~~~~~~~l~~~ 478 (539)
|.....++.-++.
T Consensus 151 P~la~~iR~~ie~ 163 (223)
T 3dfz_A 151 PLLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9988888887765
No 362
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.40 E-value=0.0064 Score=58.68 Aligned_cols=70 Identities=24% Similarity=0.259 Sum_probs=53.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|+|+|-.+++++..|++.|. +|++++|+.++.+.+.+.+.... .........+.+.+
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~------------------~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF------------------PGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC------------------TTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC------------------Ccceehhhhhhhhc
Confidence 479999999999999999999996 89999999999888765442211 11222333356788
Q ss_pred cCEEEEccc
Q 009256 388 VDMVIEAVI 396 (539)
Q Consensus 388 aDlVi~avp 396 (539)
+|+||.+.|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 363
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.35 E-value=0.0017 Score=68.02 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=37.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (539)
+||-|+|+|.+|..+|..|...||+|+++|.|+++++.+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 47999999999999999999999999999999999887644
No 364
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.34 E-value=0.05 Score=57.39 Aligned_cols=166 Identities=12% Similarity=0.075 Sum_probs=103.1
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.=|+|.. -.++++-.....+.++.++.. .+-+|.|-=. +.|..|.+-++. ........++ ..+.
T Consensus 334 via~~~~~~~G~~~~~~~~Kaar~i~~a~~~-~~Plv~lvDt-pG~~~G~~~E~~----------g~~~~~A~~~-~a~~ 400 (527)
T 1vrg_A 334 IVANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQEHG----------GIIRHGAKLL-YAYS 400 (527)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHH
T ss_pred EEEEcCcccCCCCCHHHHHHHHHHHHHHhhc-CCCeEEEecC-CCCcCchhhHHh----------HHHHHHHHHH-HHHh
Confidence 33355543 589999999999999888654 4556666322 235555432211 1122233455 5688
Q ss_pred hCCCcEEEEEcCccccchhHhhhc----cCEEEeeCCceEeCCcccCCCCCCcchhhcccccc-----CHHHHHH-HHH-
Q 009256 96 DCKKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML- 164 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v-----G~~~a~~-l~l- 164 (539)
+...|+|+.|-|.|.|||+.-... +|+++|.++++++ .+++-|.+..+-+.- -....++ +.-
T Consensus 401 ~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~ 473 (527)
T 1vrg_A 401 EATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRKLIEE 473 (527)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHH
T ss_pred cCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence 999999999999999887744333 8998888887776 444444443333321 0111111 221
Q ss_pred -cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 009256 165 -LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (539)
Q Consensus 165 -~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (539)
.-+.-++..+.+.|+||.|+++.+..+......+.+...
T Consensus 474 y~~~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~~~ 513 (527)
T 1vrg_A 474 YKQQFANPYIAASRGYVDMVIDPRETRKYIMRALEVCETK 513 (527)
T ss_dssp HHHHTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred HHHhhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHhcC
Confidence 112367788999999999999988877766666665544
No 365
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.34 E-value=0.0048 Score=57.41 Aligned_cols=40 Identities=8% Similarity=0.238 Sum_probs=34.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHH-HCCCeEEEEeCChH-HHHHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLKG 347 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~-~~G~~V~~~d~~~~-~~~~~ 347 (539)
|++|.|.|+ |.+|..++..|+ +.|++|++++|+++ +++.+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~ 47 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE 47 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh
Confidence 455999995 999999999999 89999999999987 65443
No 366
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.30 E-value=0.0029 Score=62.91 Aligned_cols=65 Identities=15% Similarity=0.195 Sum_probs=46.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.||+|||+|.||..++..+.+. +.++ .++|++++. .. .. .+..++++ +.+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~~-------------gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------KT-------------PVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------SS-------------CEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------cC-------------CCceeCCHHHHh
Confidence 4799999999999999999876 5665 588988653 11 00 12233455 334
Q ss_pred CCcCEEEEcccCChh
Q 009256 386 KDVDMVIEAVIESVP 400 (539)
Q Consensus 386 ~~aDlVi~avpe~~~ 400 (539)
.++|+||+|+|....
T Consensus 57 ~~~DvViiatp~~~h 71 (320)
T 1f06_A 57 DDVDVLFLCMGSATD 71 (320)
T ss_dssp TTCSEEEECSCTTTH
T ss_pred cCCCEEEEcCCcHHH
Confidence 789999999987654
No 367
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.24 E-value=0.006 Score=60.28 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=37.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~~~~i 351 (539)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++.+.+++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~ 201 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKI 201 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHh
Confidence 479999999999999999999998 89999999 77777665544
No 368
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.22 E-value=0.0034 Score=64.73 Aligned_cols=70 Identities=19% Similarity=0.194 Sum_probs=50.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHC---------CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc
Q 009256 310 KVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 379 (539)
||||||+|.||...+..+.+. +.+|+ ++|+++++++...++. +.....
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~----------------------~~~~~y 85 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL----------------------GAEKAY 85 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH----------------------TCSEEE
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc----------------------CCCeEE
Confidence 799999999999888887764 34555 7799999888765432 222344
Q ss_pred CCc-cCC--CCcCEEEEcccCChhH
Q 009256 380 LDY-SEF--KDVDMVIEAVIESVPL 401 (539)
Q Consensus 380 ~~~-~~~--~~aDlVi~avpe~~~~ 401 (539)
+|+ +.+ .+.|+|++|+|.....
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp~~~H~ 110 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSPNHLHY 110 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHH
Confidence 555 333 4689999999976654
No 369
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.21 E-value=0.0055 Score=62.99 Aligned_cols=44 Identities=23% Similarity=0.231 Sum_probs=38.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G---~~V~~~d~~~~~~~~~~~~i 351 (539)
|+||+|+|+|.+|..++..|++.| .+|+++|+++++++...+.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l 47 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSI 47 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHh
Confidence 468999999999999999999998 39999999999888775543
No 370
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.0028 Score=66.37 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~ 347 (539)
.+++|.|+|+|.+|.+++..|++. |++|+++||++++++.+
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 356899999999999999999998 78999999999887665
No 371
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.20 E-value=0.087 Score=55.55 Aligned_cols=139 Identities=12% Similarity=0.107 Sum_probs=88.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEE
Q 009256 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (539)
Q Consensus 25 ~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaa 104 (539)
.-++.....+.+..+++.+.+. .+-+|.|.-. .|+.+.+-... ...+.+.+.+.. ......|+|+.
T Consensus 111 gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dS-----gGAR~qeg~~~-----l~g~~~~~~~~~---~~s~~iP~Isv 176 (527)
T 1vrg_A 111 GGSLGEMHAKKIVKLLDLALKM-GIPVIGINDS-----GGARIQEGVDA-----LAGYGEIFLRNT---LASGVVPQITV 176 (527)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEE-----CSBCGGGTHHH-----HHHHHHHHHHHH---HHTTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEECC-----CCCCccchhHH-----HHHHHHHHHHHH---HhCCCCCEEEE
Confidence 4789999999999999988765 3456666542 34444321110 001111121221 23556999999
Q ss_pred EcCccccchhHhhhccCEEEeeCC-ceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCCCHH-----HHH--H
Q 009256 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--K 176 (539)
Q Consensus 105 v~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~-----eA~--~ 176 (539)
|.|+|.|||......||++|+.++ +.+++ .|+...+. .+|+.++.+ +.+ +
T Consensus 177 v~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi~~--~~ge~v~~e~lggae~~~~~ 234 (527)
T 1vrg_A 177 IAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVIKA--VTGEEISQEDLGGAMVHNQK 234 (527)
T ss_dssp EEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHHBHHHHHHT
T ss_pred EeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHHHH--HhCCCCCccccccHHHHhhc
Confidence 999999999988889999999987 66443 12222211 357777764 222 6
Q ss_pred cCCcceecCcc-hHHHHHHHHHHH
Q 009256 177 LGLIDAVVTSE-ELLKVSRLWALD 199 (539)
Q Consensus 177 ~Glv~~vv~~~-~l~~~a~~~a~~ 199 (539)
.|++|.+++++ ++.+.+.++..-
T Consensus 235 ~G~vd~vv~d~~~~~~~~~~~Ls~ 258 (527)
T 1vrg_A 235 SGNAHFLADNDEKAMSLVRTLLSY 258 (527)
T ss_dssp SCCCSEEESSHHHHHHHHHHHHTT
T ss_pred ccceEEEecCHHHHHHHHHHHHHh
Confidence 89999999864 455555555433
No 372
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.17 E-value=0.028 Score=56.71 Aligned_cols=70 Identities=9% Similarity=0.100 Sum_probs=49.9
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 009256 309 RKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (539)
Q Consensus 309 ~kI~iIG~G~mG~-~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 385 (539)
.||||||+|.+|. .++..+...|++|+ ++|+++++++...+.. +.....+++ +.+
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~----------------------~~~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVY----------------------ADARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHS----------------------SSCCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHc----------------------CCCcccCCHHHHh
Confidence 4899999999995 56777777888855 7899999877764321 123345566 334
Q ss_pred C--CcCEEEEcccCChh
Q 009256 386 K--DVDMVIEAVIESVP 400 (539)
Q Consensus 386 ~--~aDlVi~avpe~~~ 400 (539)
. +.|+|++++|....
T Consensus 85 ~~~~vD~V~I~tp~~~H 101 (361)
T 3u3x_A 85 EDENIGLIVSAAVSSER 101 (361)
T ss_dssp TCTTCCEEEECCCHHHH
T ss_pred cCCCCCEEEEeCChHHH
Confidence 3 58999999996554
No 373
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.17 E-value=0.0082 Score=56.56 Aligned_cols=38 Identities=16% Similarity=-0.042 Sum_probs=34.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
++|.|+|+|.+|..++..|.+.|+ |+++|++++.++.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 479999999999999999999999 99999999887654
No 374
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.16 E-value=0.0024 Score=59.46 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=33.7
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHH
Q 009256 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (539)
Q Consensus 310 kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (539)
||.|.|+ |.+|..++..|++.|++|++++|+++..+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6999997 999999999999999999999999877554
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.14 E-value=0.015 Score=57.96 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=31.9
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHCCCeEEEEeCCh
Q 009256 307 GVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~-iA~~l~~~G~~V~~~d~~~ 341 (539)
.+++|.|||.|.+|.+ +|..|.+.|++|+++|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3679999999999996 9999999999999999875
No 376
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.10 E-value=0.0079 Score=62.63 Aligned_cols=77 Identities=19% Similarity=0.222 Sum_probs=52.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC----
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL---- 380 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---- 380 (539)
...+|+|||+|.||...+..+.+. |++|+ ++|+++++++.+.+.+. +.|. ......+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~~ 81 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGND 81 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSSTT
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCCC
Confidence 345899999999999999888874 67764 88999998877644321 1110 0012233
Q ss_pred Cc-cCCC--CcCEEEEcccCChh
Q 009256 381 DY-SEFK--DVDMVIEAVIESVP 400 (539)
Q Consensus 381 ~~-~~~~--~aDlVi~avpe~~~ 400 (539)
++ +.++ +.|+|++|+|....
T Consensus 82 ~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 82 DYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp THHHHTTCTTCCEEEECCCGGGH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH
Confidence 55 4444 68999999997664
No 377
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.05 E-value=0.0063 Score=59.17 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=53.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. +|.++|..|.+.|.+|+++++....++. + +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l--~---------------------------------~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM--I---------------------------------DYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH--H---------------------------------HHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh--h---------------------------------hhhcc
Confidence 4899999876 7999999999999999999974332220 0 22568
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
||+||.+++...-+. .+.++++++|++...
T Consensus 211 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYVK-------GEWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCBC-------GGGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCc-------HHhcCCCcEEEEEec
Confidence 999999997432221 235688998886554
No 378
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.03 E-value=0.019 Score=57.12 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------eEEEEeCCh
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~ 341 (539)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 48999997 9999999999999996 899999975
No 379
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.03 E-value=0.018 Score=59.47 Aligned_cols=153 Identities=17% Similarity=0.149 Sum_probs=82.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCC---C-CHHHHHHH--hhcccccC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGK---L-TQDKANNA--LKMLKGVL 380 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~---~-~~~~~~~~--~~~i~~~~ 380 (539)
-+|||||+|.||..++..+.+. |.+| .++|+++++++...+.... .... . +..+.... .+....++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG------~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYG------DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHS------SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcC------CccccccccchhhhhhhhccCCceEEC
Confidence 3799999999999999887653 5554 4779999987776432100 0000 0 11111110 12344566
Q ss_pred Cc-cCCC--CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhhccCCCCcEEEeccCCCCCCCC
Q 009256 381 DY-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP 454 (539)
Q Consensus 381 ~~-~~~~--~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~---~i~~~~~~~~r~vg~h~~~p~~~~~ 454 (539)
|+ +.+. +.|+|++++|....-.+.....+ ..+.-|++........ .+....... |..
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL----~AGKHVv~~nk~l~~~eg~eL~~~A~e~----Gvv--------- 160 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIAAI----RNGKHLVMMNVEADVTIGPYLKAQADKQ----GVI--------- 160 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHHHH----HTTCEEEECCHHHHHHHHHHHHHHHHHH----TCC---------
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHHHH----HcCCcEEecCcccCHHHHHHHHHHHHHh----CCe---------
Confidence 77 4444 68999999974322122222223 3444444322222221 111111111 111
Q ss_pred eeeeecCCCCcHHHHHHHHHHHHHcCceeEEEc
Q 009256 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (539)
Q Consensus 455 ~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v~ 487 (539)
+.+..+ ..+..+..+.++.+.+|..++.++
T Consensus 161 -l~~~~g--dqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 -YSLGAG--DEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp -EEECTT--SHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred -eeecCC--cchHHHHHHHHHHHhCCCeEEEec
Confidence 112222 346777888899999999999986
No 380
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.02 E-value=0.008 Score=58.21 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=57.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHH-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
..||+|+|+ |.||..++..+.. .|++|+ ++|++++.... ...+.+..- ....+..++++ +
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g------------~d~~~~~g~----~~~~v~~~~dl~~ 68 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG------------SDAGELAGA----GKTGVTVQSSLDA 68 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS------------CCTTCSSSS----SCCSCCEESCSTT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhh------------hhHHHHcCC----CcCCceecCCHHH
Confidence 358999998 9999999998774 578887 77887542100 000000000 00112334555 5
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
.+.++|+||++.+ ++........ .+..+.-+++.|++....+
T Consensus 69 ~l~~~DvVIDft~--p~~~~~~~~~---a~~~G~~vVigTtG~~~e~ 110 (273)
T 1dih_A 69 VKDDFDVFIDFTR--PEGTLNHLAF---CRQHGKGMVIGTTGFDEAG 110 (273)
T ss_dssp TTTSCSEEEECSC--HHHHHHHHHH---HHHTTCEEEECCCCCCHHH
T ss_pred HhcCCCEEEEcCC--hHHHHHHHHH---HHhCCCCEEEECCCCCHHH
Confidence 5678999997775 3332333333 3334444555555666653
No 381
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.00 E-value=0.0045 Score=59.43 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=53.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. +|.++|..|...|.+|++++++...++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 4899999874 899999999999999999986532221 34678
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+||.+++...-+. .+.+++++++++..+.
T Consensus 194 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLN-------REMVTPGSVVIDVGIN 224 (276)
T ss_dssp SSEEEECSSCTTCBC-------GGGCCTTCEEEECCCE
T ss_pred CCEEEECCCCCcccc-------HhhccCCcEEEEeccC
Confidence 999999997432222 2456889888875543
No 382
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.99 E-value=0.005 Score=59.52 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=59.4
Q ss_pred CCcceEEEEc-CCCCcHHHHHHHHHC-CCeEEE-EeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG-~G~mG~~iA~~l~~~-G~~V~~-~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+.+.||+|+| .|.||..++..+.+. +++++. +|+++..... ...+.+. .....+..++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G------------~d~gel~-----g~~~gv~v~~dl 67 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG------------QDAGAFL-----GKQTGVALTDDI 67 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT------------SBTTTTT-----TCCCSCBCBCCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc------------ccHHHHh-----CCCCCceecCCH
Confidence 3457999999 899999999988865 677775 6887432100 0000000 000124445566
Q ss_pred -cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 009256 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (539)
Q Consensus 383 -~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (539)
+.+.++|+||++.+ ++.....+... +..+.-+++.|++.+...
T Consensus 68 ~~ll~~~DVVIDfT~--p~a~~~~~~~a---l~~G~~vVigTTG~s~~~ 111 (272)
T 4f3y_A 68 ERVCAEADYLIDFTL--PEGTLVHLDAA---LRHDVKLVIGTTGFSEPQ 111 (272)
T ss_dssp HHHHHHCSEEEECSC--HHHHHHHHHHH---HHHTCEEEECCCCCCHHH
T ss_pred HHHhcCCCEEEEcCC--HHHHHHHHHHH---HHcCCCEEEECCCCCHHH
Confidence 44678999999886 33333333333 333444555666776653
No 383
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.98 E-value=0.0066 Score=59.92 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=36.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~~~~ 350 (539)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++.+.++
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~ 194 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKR 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHH
Confidence 479999999999999999999998 89999999 7666665544
No 384
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.98 E-value=0.0066 Score=61.45 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=47.7
Q ss_pred cceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+.||+|||+|.||.. .+..+.+. +++|+ ++|+++++++.. . ......+++ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------~------------~~~~~~~~~~~ 61 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------L------------PDVTVIASPEA 61 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------C------------TTSEEESCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------C------------CCCcEECCHHH
Confidence 458999999999997 56666654 77775 789998764310 0 123345565 4
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. +.|+|++|+|.....
T Consensus 62 ll~~~~~D~V~i~tp~~~H~ 81 (364)
T 3e82_A 62 AVQHPDVDLVVIASPNATHA 81 (364)
T ss_dssp HHTCTTCSEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEeCChHHHH
Confidence 444 799999999976653
No 385
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.95 E-value=0.032 Score=55.77 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=59.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEEEE-eCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHH-HHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~-d~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~-~~~~~~i~~~~~~-~ 383 (539)
.||||+|+|.+|..+++.+..+ +++|+.+ |.+++....+.+. +..-..|.. ...+. ...-+.+....+. +
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchHH
Confidence 5899999999999999998876 5776644 6665554444321 000001111 11111 1111233343344 4
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
.+.++|+|++|.|..... .... ..+++.|+.++++.+
T Consensus 78 ~~~~vDiV~eatg~~~s~--~~a~--~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGK--QNLE--NIYKPHKVKAILQGG 114 (343)
T ss_dssp TGGGCSEEEECCCTTHHH--HHHH--HTTTTTTCEEEECTT
T ss_pred hccCCCEEEECCCccccH--HHHH--HHHHHCCCEEEECCC
Confidence 457999999999855422 1111 356677776665444
No 386
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.95 E-value=0.0064 Score=61.37 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=47.3
Q ss_pred cceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 308 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
+.||+|||+|.||.. .+..+.+. +++|+ ++|+++++... . .......+++ +
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~---~----------------------~~~~~~~~~~~~ 59 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR---D----------------------FPDAEVVHELEE 59 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH---H----------------------CTTSEEESSTHH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh---h----------------------CCCCceECCHHH
Confidence 458999999999997 56666554 67775 77999865221 0 0123445566 4
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. +.|+|++|+|.....
T Consensus 60 ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 60 ITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp HHTCTTCCEEEECSCTTTHH
T ss_pred HhcCCCCCEEEEcCCcHHHH
Confidence 444 799999999977654
No 387
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.93 E-value=0.013 Score=59.79 Aligned_cols=70 Identities=14% Similarity=0.017 Sum_probs=50.7
Q ss_pred ceEEEEcCC-CCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G-~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.||+|||+| .||..++..+.+. +++|+ ++|+++++.+...+.. .+...+++ +.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-----------------------GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-----------------------TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-----------------------CCCeECCHHHH
Confidence 489999999 9999999998875 56665 7899998877654321 12334555 33
Q ss_pred CC--CcCEEEEcccCChhH
Q 009256 385 FK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~ 401 (539)
+. ++|+|++++|.....
T Consensus 60 l~~~~vD~V~i~tp~~~H~ 78 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFHC 78 (387)
T ss_dssp HHHSCCSEEEECSCGGGHH
T ss_pred HcCCCCCEEEEcCCcHHHH
Confidence 43 599999999976543
No 388
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=95.90 E-value=0.16 Score=54.02 Aligned_cols=171 Identities=13% Similarity=0.059 Sum_probs=97.6
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHH
Q 009256 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (539)
Q Consensus 17 ~i~l~~p~--~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (539)
.|.-|.+. .-++++...+.+..+++.+.+. .+-+|.|.-.|+ +.+.+-..... ....+.+.+.... .+
T Consensus 109 ~V~a~D~tv~gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgG-----Arl~~qe~~~~--~l~~~g~if~~~~--~l 178 (588)
T 3gf3_A 109 YIVASDNKKMAGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSG-----VEFPNQDKVYP--NRRGGGTPFFRNS--EL 178 (588)
T ss_dssp EEEEECTTSGGGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGHHHHSS--STTSTTHHHHHHH--HH
T ss_pred EEEEECCcccCCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cCccccccccc--chhhHHHHHHHHH--HH
Confidence 33444443 3788899999999999988765 355777764443 33321111000 0111223232222 35
Q ss_pred HhCCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccC--CCCCCcchhhccccc---cCHHHHHHHHHcCCCC
Q 009256 95 EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL--GVIPGFGGTQRLPRL---VGLSKAIEMMLLSKSI 169 (539)
Q Consensus 95 ~~~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~--Gl~p~~g~~~~l~r~---vG~~~a~~l~l~g~~~ 169 (539)
.....|+|+.|.|.|.|||...++++|++++.+++.+++.-..+ |+-|. | .. .+.- +......+-..+.+.+
T Consensus 179 s~~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~-g-~~-~~~~~~~~~~~~~ge~~vs~eeL 255 (588)
T 3gf3_A 179 NQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPK-G-YI-DDEAAEQIIAAQIENSKLKVPAP 255 (588)
T ss_dssp HHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCT
T ss_pred hcCCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCcc-c-cc-cccchhhhhhhhccccccChhhc
Confidence 67789999999999999998779999999999999888753321 11110 0 00 1110 0011111112466677
Q ss_pred CHHHHH--HcCCcceecCcch-HHHHHHHHHHHH
Q 009256 170 TSEEGW--KLGLIDAVVTSEE-LLKVSRLWALDI 200 (539)
Q Consensus 170 ~a~eA~--~~Glv~~vv~~~~-l~~~a~~~a~~l 200 (539)
.+.+.. .-|++|.++++|+ ..+.++++..-|
T Consensus 256 GGa~~h~~~sGv~d~~a~de~~al~~~r~~ls~L 289 (588)
T 3gf3_A 256 GSVPIHYDETGFFREVYQNDLGVIDGIKKYISYL 289 (588)
T ss_dssp TBHHHHTTTSCCSCEEESSHHHHHHHHHHHHHTS
T ss_pred cchhhhccccccceEEeCCHHHHHHHHHHHHHhC
Confidence 777766 5899999997764 445555444433
No 389
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.87 E-value=0.0093 Score=61.13 Aligned_cols=74 Identities=20% Similarity=0.211 Sum_probs=51.2
Q ss_pred cceEEEEcCCC---CcHHHHHHHHHCC-CeEE--EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 009256 308 VRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (539)
Q Consensus 308 ~~kI~iIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (539)
.-||+|||+|. ||...+..+...+ ++|+ ++|+++++.+...++. | + ......++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g-~---------~~~~~~~~ 71 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQL----------G-V---------DSERCYAD 71 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHT----------T-C---------CGGGBCSS
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHh----------C-C---------CcceeeCC
Confidence 35899999999 9999988887765 6776 5799999877654321 1 0 00134455
Q ss_pred c-cCCC-------CcCEEEEcccCChhH
Q 009256 382 Y-SEFK-------DVDMVIEAVIESVPL 401 (539)
Q Consensus 382 ~-~~~~-------~aDlVi~avpe~~~~ 401 (539)
+ +.+. +.|+|++|+|.....
T Consensus 72 ~~~ll~~~~~~~~~vD~V~i~tp~~~H~ 99 (398)
T 3dty_A 72 YLSMFEQEARRADGIQAVSIATPNGTHY 99 (398)
T ss_dssp HHHHHHHHTTCTTCCSEEEEESCGGGHH
T ss_pred HHHHHhcccccCCCCCEEEECCCcHHHH
Confidence 5 3333 489999999977653
No 390
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=95.85 E-value=0.088 Score=55.47 Aligned_cols=166 Identities=16% Similarity=0.095 Sum_probs=103.6
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.=|+|.. -.++++-.....+.++.++.. .+-+|.|-=. +.|..|.+-++. -.......++ ..+.
T Consensus 330 vian~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDt-pGf~~G~~~E~~----------Gi~~~~A~~l-~a~a 396 (523)
T 1on3_A 330 IVANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQEYG----------GIIRHGAKML-YAYS 396 (523)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHH
T ss_pred EEEecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeC-CCcCcchHHHHh----------hHHHHHHHHH-HHHh
Confidence 33355543 589999999999999888654 4556665322 346666543211 1122333555 5688
Q ss_pred hCCCcEEEEEcCccccchhHhhhc----cCEEEeeCCceEeCCcccCCCCCCcchhhcccccc-----CHHHHH-HHHH-
Q 009256 96 DCKKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAI-EMML- 164 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v-----G~~~a~-~l~l- 164 (539)
+...|+|+.|-|.++|||+.-... +|+++|.++++++ .+++-|.+..+-+.- -....+ ++.-
T Consensus 397 ~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~ 469 (523)
T 1on3_A 397 EATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEKIEE 469 (523)
T ss_dssp HCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHH
T ss_pred cCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence 999999999999999888754444 7888887777765 444444444333321 001111 1211
Q ss_pred -cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 009256 165 -LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (539)
Q Consensus 165 -~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (539)
.-+.-++..+.+.|+||.|+++.+..+......+.+...
T Consensus 470 y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~~~ 509 (523)
T 1on3_A 470 YQNAFNTPYVAAARGQVDDVIDPADTRRKIASALEMYATK 509 (523)
T ss_dssp HHHHHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGGGC
T ss_pred HHHhhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHhcC
Confidence 111256788999999999999988877666666655443
No 391
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.83 E-value=0.0084 Score=60.06 Aligned_cols=71 Identities=11% Similarity=-0.060 Sum_probs=51.2
Q ss_pred cceEEEEcCC-CCcHHHHHHHHHC--CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 009256 308 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (539)
Q Consensus 308 ~~kI~iIG~G-~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 382 (539)
..+|+|||+| .||...+..+.+. +++| .++|+++++++.+.++. +.....+|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~----------------------~~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV----------------------GNPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH----------------------SSCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh----------------------CCCcccCCHH
Confidence 3489999999 8999999988876 4666 58899999877664321 112344555
Q ss_pred cCC--CCcCEEEEcccCChh
Q 009256 383 SEF--KDVDMVIEAVIESVP 400 (539)
Q Consensus 383 ~~~--~~aDlVi~avpe~~~ 400 (539)
+.+ .+.|+|++|+|....
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGH
T ss_pred HHhcCCCCCEEEEeCCchHH
Confidence 334 368999999996654
No 392
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.78 E-value=0.011 Score=57.42 Aligned_cols=73 Identities=19% Similarity=0.200 Sum_probs=54.0
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. +|.++|..|...|.+|++++++...+. +.++.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 4899999995 699999999999999999975532211 44689
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+||.+++..--+. .+.++++++|++....
T Consensus 209 ADIVI~Avg~p~~I~-------~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 209 GDILVVATGQPEMVK-------GEWIKPGAIVIDCGIN 239 (301)
T ss_dssp CSEEEECCCCTTCBC-------GGGSCTTCEEEECCCB
T ss_pred CCEEEECCCCcccCC-------HHHcCCCcEEEEccCC
Confidence 999999997432222 2346789988876543
No 393
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.77 E-value=0.0039 Score=58.15 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 344 (539)
|++|.|.|+ |.+|..++..|++.|++|++++|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999995 9999999999999999999999998754
No 394
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.73 E-value=0.034 Score=58.68 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=32.2
Q ss_pred CCCcceEEEEcCCCCcHH-HHHHHHHCCCeEEEEeCChH
Q 009256 305 PRGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 305 ~~~~~kI~iIG~G~mG~~-iA~~l~~~G~~V~~~d~~~~ 342 (539)
+..+++|.|||.|..|.+ +|..|.+.|++|+++|.++.
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 345789999999999996 99999999999999998754
No 395
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.72 E-value=0.016 Score=59.77 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=49.9
Q ss_pred ceEEEEcCCC---CcHHHHHHHHHCC-CeEE--EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 309 RKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
.||+|||+|. ||...+..+...+ ++|+ ++|+++++++...++. |. ......+++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g~----------~~~~~~~~~ 97 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------GL----------DPSRVYSDF 97 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------TC----------CGGGBCSCH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------CC----------CcccccCCH
Confidence 4899999999 9999888887765 6765 6799999877764431 10 001334555
Q ss_pred -cCCC-------CcCEEEEcccCChhH
Q 009256 383 -SEFK-------DVDMVIEAVIESVPL 401 (539)
Q Consensus 383 -~~~~-------~aDlVi~avpe~~~~ 401 (539)
+.+. +.|+|++++|.....
T Consensus 98 ~~ll~~~~~~~~~vD~V~I~tp~~~H~ 124 (417)
T 3v5n_A 98 KEMAIREAKLKNGIEAVAIVTPNHVHY 124 (417)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCTTSHH
T ss_pred HHHHhcccccCCCCcEEEECCCcHHHH
Confidence 3333 489999999977653
No 396
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.71 E-value=0.024 Score=54.05 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCCh
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (539)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 379999999999999999999997 899998764
No 397
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.70 E-value=0.011 Score=61.36 Aligned_cols=73 Identities=15% Similarity=0.082 Sum_probs=51.3
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHC--CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 308 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 308 ~~kI~iIG~----G~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
..+|+|||+ |.||...+..+.+. +++| .++|+++++.+.+.+.. +. ......+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~----------g~----------~~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL----------KL----------SNATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT----------TC----------TTCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc----------CC----------CcceeeC
Confidence 358999999 99999999999886 6776 58899998877653321 10 0112345
Q ss_pred Cc-cCCC--CcCEEEEcccCChh
Q 009256 381 DY-SEFK--DVDMVIEAVIESVP 400 (539)
Q Consensus 381 ~~-~~~~--~aDlVi~avpe~~~ 400 (539)
++ +.+. +.|+|++|+|....
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~~H 102 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVASH 102 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHHHH
T ss_pred CHHHHhcCCCCCEEEEeCCcHHH
Confidence 55 3343 69999999996554
No 398
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.64 E-value=0.0094 Score=58.75 Aligned_cols=91 Identities=15% Similarity=0.004 Sum_probs=58.2
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-----c--C
Q 009256 309 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 380 (539)
Q Consensus 309 ~kI~iIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~--~ 380 (539)
+++.|||.|.| |..+|..|...|.+|+++||+..+.....+ ..+. ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~----------~la~----------~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE----------SLKL----------NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC----------CSSC----------CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH----------HHhh----------hcccccccccccHh
Confidence 58999999976 999999999999999999998432111000 0000 00001 1 2
Q ss_pred Cc-cCCCCcCEEEEcccCChh-HHHHHHHHHHHhCCCCeEEEecCCCC
Q 009256 381 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 426 (539)
Q Consensus 381 ~~-~~~~~aDlVi~avpe~~~-~~~~~~~~l~~~~~~~~ii~s~ts~~ 426 (539)
++ +.+++||+||.+++..-- +.. +.+++++++++..+..
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~-------e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPT-------EYIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCT-------TTSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCH-------HHcCCCeEEEEcCCCc
Confidence 34 567899999999974321 221 2357888888776654
No 399
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.63 E-value=0.011 Score=62.20 Aligned_cols=75 Identities=20% Similarity=0.135 Sum_probs=52.0
Q ss_pred CCcceEEEEcC----CCCcHHHHHHHHHC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 009256 306 RGVRKVAVIGG----GLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (539)
Q Consensus 306 ~~~~kI~iIG~----G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (539)
+...+|+|||+ |.||...+..|.+. +++|+ ++|+++++++.+.+.. |. .....
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~----------g~----------~~~~~ 96 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL----------QL----------KHATG 96 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT----------TC----------TTCEE
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc----------CC----------Cccee
Confidence 33458999999 99999999999885 67765 8899998877654321 10 01123
Q ss_pred cCCc-cCC--CCcCEEEEcccCChh
Q 009256 379 VLDY-SEF--KDVDMVIEAVIESVP 400 (539)
Q Consensus 379 ~~~~-~~~--~~aDlVi~avpe~~~ 400 (539)
.+++ +.+ .+.|+|++|+|....
T Consensus 97 ~~d~~ell~~~~vD~V~I~tp~~~H 121 (479)
T 2nvw_A 97 FDSLESFAQYKDIDMIVVSVKVPEH 121 (479)
T ss_dssp ESCHHHHHHCTTCSEEEECSCHHHH
T ss_pred eCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 4555 334 379999999996554
No 400
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.63 E-value=0.011 Score=56.90 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=53.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. +|.++|..|...|.+|++++++...++ +.++.
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 4899999876 699999999999999999986532211 34678
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+||.+++...-+. .+.++++++|++....
T Consensus 204 ADIVI~Avg~p~~I~-------~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLR-------SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp CSEEEECSSCTTCBC-------GGGSCTTEEEEECCCE
T ss_pred CCEEEECCCCCCcCC-------HHHcCCCeEEEEeccC
Confidence 999999997422221 2456889888865543
No 401
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=95.59 E-value=0.14 Score=54.24 Aligned_cols=164 Identities=15% Similarity=0.147 Sum_probs=100.1
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.=|+|.. -.++++-.+...+.++.++.. .+-+|.|-=. +.|..|.+-++. -.......++ ..+.
T Consensus 351 vian~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~~----------Gi~~~ga~~l-~a~~ 417 (548)
T 2bzr_A 351 IVANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEYN----------GIIRRGAKLL-YAYG 417 (548)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHH
T ss_pred EEEECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHHh----------hHHHHHHHHH-HHHh
Confidence 33355543 589999999999999988754 4555555321 346666543221 1122233455 5688
Q ss_pred hCCCcEEEEEcCccccchhHhhh----ccCEEEeeCCceEeCCcccCCCCCCcchhhccccc-cCH--------HHHH-H
Q 009256 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL--------SKAI-E 161 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-vG~--------~~a~-~ 161 (539)
+...|+|+.|-|.|+|||..-.. .+|+++|.++++++ ++++-|....+-+. +-. ...+ +
T Consensus 418 ~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~ 490 (548)
T 2bzr_A 418 EATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLRLR 490 (548)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC----------CHHHHHH
T ss_pred CCCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhhcccccHHHHHHH
Confidence 99999999999999998875443 38999888888776 33333433333322 110 0111 1
Q ss_pred HHH--cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHH
Q 009256 162 MML--LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (539)
Q Consensus 162 l~l--~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (539)
+.- .-..-++..+.+.|+||.|+++.+.........+.+.
T Consensus 491 ~~~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~ 532 (548)
T 2bzr_A 491 LQQEYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRLLE 532 (548)
T ss_dssp HHHHHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHHHh
Confidence 211 0112355779999999999999877765555554443
No 402
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.51 E-value=0.02 Score=55.73 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=37.5
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
+++.|+| +|-+|.+++..|++.|.+|++++|++++.+...+.+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~ 163 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV 163 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHH
Confidence 4788999 899999999999999999999999998877665443
No 403
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.51 E-value=0.0066 Score=57.20 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=34.5
Q ss_pred CCCcceEEEEc-CCCCcHHHHHHHHHCC-CeEEEEeCChHHHH
Q 009256 305 PRGVRKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLL 345 (539)
Q Consensus 305 ~~~~~kI~iIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~ 345 (539)
++.|++|.|.| .|.+|..++..|++.| ++|++++|+++.++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH 62 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc
Confidence 34577899999 5999999999999999 89999999987543
No 404
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.50 E-value=0.013 Score=56.43 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=52.8
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. +|.++|..|...|.+|+++++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 4899999876 699999999999999999976422111 34688
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
||+||.+++...-+. .+.+++++++++...
T Consensus 205 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi 234 (285)
T 3l07_A 205 ADILIVAVGKPNFIT-------ADMVKEGAVVIDVGI 234 (285)
T ss_dssp CSEEEECCCCTTCBC-------GGGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCC-------HHHcCCCcEEEEecc
Confidence 999999997432221 245688888876554
No 405
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.49 E-value=0.0077 Score=58.14 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=52.9
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. .|.++|..|...|.+|++++++...+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 4899999996 599999999999999999986543222 33578
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
||+||.+++..--+.. +.++++++|++...
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVgi 232 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVGI 232 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECCC
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEccC
Confidence 9999999973321221 24578888876554
No 406
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.48 E-value=0.012 Score=54.44 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.1
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHH
Q 009256 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYL 344 (539)
Q Consensus 310 kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 344 (539)
||.|.| .|.+|..++..|++.|++|++++|+++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 799998 69999999999999999999999998653
No 407
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.45 E-value=0.015 Score=58.86 Aligned_cols=67 Identities=15% Similarity=0.070 Sum_probs=48.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.||+|||+| +|..-+..+.+. +++++ ++|+++++.+...++. .+...+|+ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~-----------------------gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF-----------------------GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT-----------------------TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh-----------------------CCCEECCHHHH
Confidence 489999999 798877777654 57766 7799999877764421 23445666 55
Q ss_pred CCCcCEEEEcccCCh
Q 009256 385 FKDVDMVIEAVIESV 399 (539)
Q Consensus 385 ~~~aDlVi~avpe~~ 399 (539)
+.+.|+|++++|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 688999999998654
No 408
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.41 E-value=0.014 Score=56.92 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
+++|.|+|+ |.+|..++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 457999996 9999999999999999999999986
No 409
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.41 E-value=0.046 Score=56.90 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
-++|.|||.|..|.+.|..|.+.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 46899999999999999999999999999999753
No 410
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=95.33 E-value=0.082 Score=56.37 Aligned_cols=158 Identities=11% Similarity=0.116 Sum_probs=103.7
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEE
Q 009256 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (539)
Q Consensus 26 Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav 105 (539)
-.++++-.....+.++.++.. .+-+|.|-=. +.|..|.+-++ .........++ .++.+.+.|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCARD-RLPIVWIQDT-TGIDVGNDAEK----------AELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhcC-CCCeEEEecC-CCCCCcHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 479999999999999877654 5666666432 34666654221 11223344556 67999999999999
Q ss_pred cCccccchhHhhhc-----c--CEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHH-----------H---HHHHH
Q 009256 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK-----------A---IEMML 164 (539)
Q Consensus 106 ~G~a~GgG~~lal~-----~--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~-----------a---~~l~l 164 (539)
-|.++|||. ++++ + |+++|.++++++ ++++-|.+..+-+.- ... + .++.-
T Consensus 452 ~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~-~~~~~~~g~~~~~~~~~~~~~~~ 522 (587)
T 1pix_A 452 LRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRR-LAKDRKAGKDLQPTIDKMNNLIQ 522 (587)
T ss_dssp CSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHH-HHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhh-hhhhhhcCCChHHHHHHHHHHHH
Confidence 999998884 5555 4 998888888776 333344433332211 110 0 11100
Q ss_pred -cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCc
Q 009256 165 -LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 205 (539)
Q Consensus 165 -~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~ 205 (539)
--+..++..|.+.|+||.|+++.+.........+.+...|.
T Consensus 523 ~y~~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~~ 564 (587)
T 1pix_A 523 AFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPE 564 (587)
T ss_dssp HHHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSCS
T ss_pred HHHHhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCCc
Confidence 01247889999999999999999888777777777766653
No 411
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.32 E-value=0.019 Score=57.67 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=47.7
Q ss_pred ceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.||+|||+|.||.. .+..+.+. +++|+ ++|+++++.+. .. ......+++ +.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~~------------~~~~~~~~~~~l 62 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------DW------------PAIPVVSDPQML 62 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------TC------------SSCCEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------hC------------CCCceECCHHHH
Confidence 48999999999997 67777665 67776 88999876441 00 123445566 33
Q ss_pred CC--CcCEEEEcccCChhH
Q 009256 385 FK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 385 ~~--~aDlVi~avpe~~~~ 401 (539)
+. +.|+|++|+|.....
T Consensus 63 l~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 63 FNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHCSSCCEEEECSCTTTHH
T ss_pred hcCCCCCEEEEeCChHHHH
Confidence 43 599999999977754
No 412
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.32 E-value=0.02 Score=56.39 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.5
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
+++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 467999996 9999999999999999999999986
No 413
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=95.31 E-value=0.18 Score=53.07 Aligned_cols=171 Identities=15% Similarity=0.198 Sum_probs=105.3
Q ss_pred cCcEEEEEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHH
Q 009256 12 NDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVEL 89 (539)
Q Consensus 12 ~~~v~~i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 89 (539)
++.-.-|.=|+|.. -.++++-.....+.++.++.. .+-+|.|.=.+ .|..|.+-++ .........+
T Consensus 330 ~G~~Vgvian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E~----------~gi~~~~Ak~ 397 (530)
T 3iav_A 330 EGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQEH----------DGIIRRGAKL 397 (530)
T ss_dssp TTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH----------TTHHHHHHHH
T ss_pred CCEEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHHHH----------hhHHHHHHHH
Confidence 34333344466653 589999999999999888764 45666664222 3666664321 1123334455
Q ss_pred HHHHHHhCCCcEEEEEcCccccchhHhhhc-----cCEEEeeCCceEeCCcccCCCCCCcchhhccccc-cC------HH
Q 009256 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VG------LS 157 (539)
Q Consensus 90 ~~~~i~~~~~p~iaav~G~a~GgG~~lal~-----~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~-vG------~~ 157 (539)
+ .++.+...|+|+.|-|.++|||. ++++ .|+++|.++++++. +++-|....+-+. +- ..
T Consensus 398 l-~a~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~V-------m~~egaa~il~r~~~~~~~~d~~~ 468 (530)
T 3iav_A 398 I-FAYAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTIADAGDDAEA 468 (530)
T ss_dssp H-HHHHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSTTTSTTCTTCHH
T ss_pred H-HHHHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEec-------CCHHHHHHHHhhhhhhhcccCHHH
Confidence 6 67899999999999999998776 5554 69998888887763 3333333322221 11 01
Q ss_pred HHHHHH--HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 009256 158 KAIEMM--LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (539)
Q Consensus 158 ~a~~l~--l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (539)
.-.++. +.-+.-++..|.+.|+||.|+++.+.........+.+...
T Consensus 469 ~~~~~~~~y~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~~~k 516 (530)
T 3iav_A 469 TRARLIQEYEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLRTK 516 (530)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHHhcC
Confidence 111111 1112246778889999999999998876665555544443
No 414
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.29 E-value=0.0035 Score=62.98 Aligned_cols=70 Identities=13% Similarity=0.044 Sum_probs=45.9
Q ss_pred ceEEEEcCCCCcHHHHHH-H-HH-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 009256 309 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~-l-~~-~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 383 (539)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+... + .......+++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~-----------~------------~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAP-----------I------------YSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSG-----------G------------GTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHH-----------h------------cCCCceECCHHH
Confidence 489999999999975443 4 32 367877 8899987542210 0 0223445666 4
Q ss_pred CCC--CcCEEEEcccCChhH
Q 009256 384 EFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 384 ~~~--~aDlVi~avpe~~~~ 401 (539)
.+. +.|+|++|+|.+...
T Consensus 60 ll~~~~~D~V~i~tp~~~h~ 79 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSHF 79 (345)
T ss_dssp HHTCTTEEEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEcCChHHHH
Confidence 444 489999999976653
No 415
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.27 E-value=0.017 Score=55.58 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=52.8
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 309 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 309 ~kI~iIG~G~m-G~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
+++.|||.|.+ |.++|..|... |.+|++++++...+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 48999999976 99999999999 889999976542211 346
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts 424 (539)
++||+||.+++..--++. +.+++++++++...
T Consensus 202 ~~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTA-------DMVRPGAAVIDVGV 233 (281)
T ss_dssp TTCSEEEECSCCTTCBCG-------GGSCTTCEEEECCE
T ss_pred hhCCEEEECCCCCcccCH-------HHcCCCcEEEEccC
Confidence 789999999973322222 34678888876543
No 416
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.25 E-value=0.0057 Score=61.85 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=47.9
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 009256 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (539)
Q Consensus 306 ~~~~kI~iIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (539)
+++.||+|||+|.||.. .+..+.+. +++|+ ++|++++++.. + .+.....+++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~ 57 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------R------------YPQASIVRSF 57 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------T------------CTTSEEESCS
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------h------------CCCCceECCH
Confidence 34458999999999997 66667665 67775 77999765211 0 0123445566
Q ss_pred -cCCC--CcCEEEEcccCChhH
Q 009256 383 -SEFK--DVDMVIEAVIESVPL 401 (539)
Q Consensus 383 -~~~~--~aDlVi~avpe~~~~ 401 (539)
+.+. +.|+|++|+|.....
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H~ 79 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTPDNTHY 79 (362)
T ss_dssp HHHHTCTTCCEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEeCChHHHH
Confidence 4444 499999999976653
No 417
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.24 E-value=0.23 Score=47.22 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=75.8
Q ss_pred cccccCCc-cCCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChHHH---hhccCC-CCcEEEeccCCC
Q 009256 375 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV---GEKTSS-QDRIIGAHFFSP 449 (539)
Q Consensus 375 ~i~~~~~~-~~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~~i---~~~~~~-~~r~vg~h~~~p 449 (539)
.++.++|. ++++++|++|.-.|--- ....+.+++.++++.++||+ ++=++++..+ .+.+.+ .-.+..+||-.-
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII~-nTCTipp~~ly~~le~l~R~DvgIsS~HPaaV 205 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIVT-HACTIPTTKFAKIFKDLGREDLNITSYHPGCV 205 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEEE-ECSSSCHHHHHHHHHHTTCTTSEEEECBCSSC
T ss_pred CcEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEEe-cccCCCHHHHHHHHHHhCcccCCeeccCCCCC
Confidence 45666665 89999999999998533 24477889999999999886 4445554432 233332 245667777554
Q ss_pred CCCCCeeeeecCCCCcHHHHHHHHHHHHHcCceeEEE
Q 009256 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486 (539)
Q Consensus 450 ~~~~~~vei~~~~~t~~e~~~~~~~l~~~lg~~~v~v 486 (539)
|... .-....-...++|+++++.+|.++.|+.++.+
T Consensus 206 Pgt~-Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v 241 (358)
T 2b0j_A 206 PEMK-GQVYIAEGYASEEAVNKLYEIGKIARGKAFKM 241 (358)
T ss_dssp TTTC-CCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCC-CccccccccCCHHHHHHHHHHHHHhCCCeEec
Confidence 4332 22233444569999999999999999999988
No 418
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.23 E-value=0.078 Score=52.30 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=35.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (539)
++|.|.|+ |.+|+.++..|++.|++|++++++++..+...
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH
Confidence 57999987 99999999999999999999999987765543
No 419
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.18 E-value=0.017 Score=55.65 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=52.6
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 009256 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (539)
Q Consensus 309 ~kI~iIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (539)
+++.|||.|. .|.++|..|...|.+|+++.+....++ +.++.
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 4899999865 799999999999999999976432111 33678
Q ss_pred cCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCC
Q 009256 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (539)
Q Consensus 388 aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~ 425 (539)
||+||.+++...-+. .+.++++++|++..+.
T Consensus 205 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVK-------GEWIKEGAIVIDVGIN 235 (286)
T ss_dssp CSEEEECCCCTTCBC-------GGGSCTTCEEEECCSC
T ss_pred CCEEEECCCCCCCCC-------HHHcCCCeEEEEeccc
Confidence 999999997432221 2456888888765543
No 420
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.15 E-value=0.0054 Score=57.09 Aligned_cols=78 Identities=22% Similarity=0.222 Sum_probs=45.4
Q ss_pred ceEEEEcCCCCcHHHHHH--HHHCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~--l~~~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.+|+|||+|.+|..++.. +...|++++ ++|.|+++...... + -.+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~------------g-----------v~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVG------------G-----------VPVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEET------------T-----------EEEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhc------------C-----------CeeechhhHHHH
Confidence 479999999999999994 445577665 77999875432100 0 011123344 33
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHH
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEK 411 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~ 411 (539)
+++.|+|++|+|... .+++...+.+
T Consensus 143 i~~~D~ViIAvPs~~--~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVPAVA--AQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSCHHH--HHHHHHHHHH
T ss_pred HHhCCEEEEecCchh--HHHHHHHHHH
Confidence 444499999998433 3455555543
No 421
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.13 E-value=0.018 Score=58.43 Aligned_cols=70 Identities=23% Similarity=0.238 Sum_probs=45.8
Q ss_pred eEEEEcCCCCcHHHHHHHHH--------CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 310 KVAVIGGGLMGSGIATAHIL--------NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~--------~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
||||||+|.||..-+..+.. .+.+|+ ++|+++++++...++. +.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~----------------------g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF----------------------GFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH----------------------TCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh----------------------CCCeecC
Confidence 79999999999876655432 245554 7799999887764432 2223455
Q ss_pred Cc-cCC--CCcCEEEEcccCChhH
Q 009256 381 DY-SEF--KDVDMVIEAVIESVPL 401 (539)
Q Consensus 381 ~~-~~~--~~aDlVi~avpe~~~~ 401 (539)
|+ +.+ .+.|+|++|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 65 333 4689999999977654
No 422
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=95.10 E-value=0.18 Score=53.03 Aligned_cols=164 Identities=14% Similarity=0.124 Sum_probs=100.0
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHH
Q 009256 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (539)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (539)
|.=|+|.. -.++++-.....+.++.+++. .+-+|.|-=. +.|..|.+-++ .-.......++ .++.
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gAk~l-~a~a 408 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDV-PGFLPGTSQEY----------GGVIKHGAKLL-YAYG 408 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CSBCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCC-CCCCCCHHHHH----------hhHHHHHHHHH-HHHH
Confidence 44456653 589999999999999887754 4556666322 23555553221 11223344556 6789
Q ss_pred hCCCcEEEEEcCccccchhHhhhc----cCEEEeeCCceEeCCcccCCCCCCcchhhcccc-ccC---HHHHHHHHHcCC
Q 009256 96 DCKKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPR-LVG---LSKAIEMMLLSK 167 (539)
Q Consensus 96 ~~~~p~iaav~G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r-~vG---~~~a~~l~l~g~ 167 (539)
+.+.|+|+.|-|.++|||..-... +|+++|.++++++. +++-|.+..+-+ .+- ....+.--+.-+
T Consensus 409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~V-------m~pegaa~Il~r~~~~~~~~~~~~~~~y~~~ 481 (531)
T 3n6r_B 409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAV-------MGAKGATEIIHRGDLGDPEKIAQHTADYEER 481 (531)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHCCTTTTSTTHHHHHHHHHHHH
T ss_pred hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEec-------CCHHHHHHHHhcccccchhHHHHHHHHHHHH
Confidence 999999999999999988743332 89998888887763 333333332222 111 011111111112
Q ss_pred CCCHHHHHHcCCcceecCcchHHHHHHHHHHHHH
Q 009256 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (539)
Q Consensus 168 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (539)
.-++..|.+.|+||.|+++.+.........+.+.
T Consensus 482 ~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~~~~ 515 (531)
T 3n6r_B 482 FANPFVASERGFVDEVIQPRSTRKRVARAFASLR 515 (531)
T ss_dssp HSSSHHHHHHTSSSEECCGGGHHHHHHHHHHTTT
T ss_pred hcCHHHHHhcCccCcccCHHHHHHHHHHHHHHHh
Confidence 2456678889999999999887765554444433
No 423
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=95.10 E-value=0.057 Score=58.60 Aligned_cols=82 Identities=11% Similarity=0.073 Sum_probs=56.0
Q ss_pred CCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCC--CHHH-
Q 009256 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TSEE- 173 (539)
Q Consensus 97 ~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~--~a~e- 173 (539)
...|+|+.|.|.|.|||..+...||++|+.+++.+.+. |+...+. .+|+.+ +.++
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~iflt--------------------GP~vIk~--~tGeeV~~s~eeL 302 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT--------------------GAPAINK--MLGREVYTSNLQL 302 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESS--------------------CHHHHHH--HHTSCCCSCTHHH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEe--------------------CHHHHHH--HhCCccccCchhc
Confidence 46799999999999999999999999999998644322 2221111 266665 4443
Q ss_pred -----HHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 009256 174 -----GWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (539)
Q Consensus 174 -----A~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (539)
-..-|++|.++++|+ .+.+.++++.+.
T Consensus 303 GGA~vh~~sGvad~va~dd~---eal~~ir~lLsy 334 (758)
T 3k8x_A 303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWMSY 334 (758)
T ss_dssp HSHHHHTTTTSSSEEESSHH---HHHHHHHHHHTT
T ss_pred chhhHHHhcCCeeEEecCHH---HHHHHHHHHHhh
Confidence 236899999997663 333444444443
No 424
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.02 E-value=0.015 Score=57.15 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
++|.|+|+ |.+|..++..|++.|++|++++|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999995 99999999999999999999999875
No 425
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.02 E-value=0.027 Score=56.17 Aligned_cols=38 Identities=21% Similarity=0.359 Sum_probs=29.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEEE-EeCChHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVVL-KEVNSEYLLK 346 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~~-~d~~~~~~~~ 346 (539)
.||+|+|+|.||..+++.+.++ +++|+. .|++++....
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~ 41 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEAR 41 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHH
Confidence 4899999999999999999874 567654 5777654443
No 426
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.00 E-value=0.011 Score=55.43 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
.|+|||+|.-|.+.|..|+++|++|+++|+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999764
No 427
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.00 E-value=0.029 Score=55.88 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=58.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHC-CCeEEEEeCCh---HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC--
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-- 380 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~-G~~V~~~d~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-- 380 (539)
|.||+|+|+ |.+|..+...|.++ .+++..+..+. ..-+...+. ... . .+. ..+.+..
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~----~p~-~-~~~----------~~~~v~~~~ 67 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDL----HPQ-L-KGI----------VELPLQPMS 67 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHH----CGG-G-TTT----------CCCBEEEES
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHh----Ccc-c-cCc----------cceeEeccC
Confidence 579999995 99999999999884 56887765433 211111110 000 0 010 0122221
Q ss_pred CccCC-CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 009256 381 DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (539)
Q Consensus 381 ~~~~~-~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~ 428 (539)
+.+.+ .++|+||+|+|... -.+...++ +..++.++++++....
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~--s~~~~~~~---~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEV--SHDLAPQF---LEAGCVVFDLSGAFRV 111 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHH--HHHHHHHH---HHTTCEEEECSSTTSS
T ss_pred CHHHHhcCCCEEEECCChHH--HHHHHHHH---HHCCCEEEEcCCcccc
Confidence 33445 89999999998433 33443333 3467888888887644
No 428
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.95 E-value=0.035 Score=55.39 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=50.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHH-HHHhhcccccCCc-cC
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA-NNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~-~~ 384 (539)
.||||+|+|.||..++..+.+. +.+|+ +.|++++.+....++.. .-..+.+. ... .-..+.+....++ +.
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g-----~~~~~~~~-~~v~~~~~~~~~v~~d~~~l 76 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELG-----IPVYAASE-EFIPRFEKEGFEVAGTLNDL 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTT-----CCEEESSG-GGHHHHHHHTCCCSCBHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcC-----cccccccc-ccceeccCCceEEcCcHHHh
Confidence 4899999999999999998875 45654 56888766655432100 00000000 000 0000123444455 44
Q ss_pred CCCcCEEEEcccCChh
Q 009256 385 FKDVDMVIEAVIESVP 400 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~ 400 (539)
+.++|+|++|.|....
T Consensus 77 ~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 77 LEKVDIIVDATPGGIG 92 (334)
T ss_dssp HTTCSEEEECCSTTHH
T ss_pred ccCCCEEEECCCcccc
Confidence 5699999999997654
No 429
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.91 E-value=0.023 Score=55.45 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
+++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 468999996 9999999999999999999999984
No 430
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.89 E-value=0.018 Score=58.37 Aligned_cols=70 Identities=17% Similarity=0.144 Sum_probs=48.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC--------CeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 009256 310 KVAVIGGGLMGSGIATAHILNN--------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G--------~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (539)
+|||||+|.||..-+..+.+.. .+| .++|+++++++...++. +.-...+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~----------------------g~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKL----------------------GWSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHH----------------------TCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHc----------------------CCCcccC
Confidence 6999999999998877776532 244 47899999887764432 2223455
Q ss_pred Cc-cCC--CCcCEEEEcccCChhH
Q 009256 381 DY-SEF--KDVDMVIEAVIESVPL 401 (539)
Q Consensus 381 ~~-~~~--~~aDlVi~avpe~~~~ 401 (539)
|+ +.+ .+.|+|++|+|.....
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~ 89 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA 89 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH
Confidence 66 334 4689999999977654
No 431
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.88 E-value=0.045 Score=54.55 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=31.2
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 307 GVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 307 ~~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
..++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3468999997 9999999999999999999999976
No 432
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.87 E-value=0.017 Score=58.15 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 340 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~ 340 (539)
.||.|+|+|.+|..+|+.+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 489999999999999999999998 89999998
No 433
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.82 E-value=0.067 Score=52.08 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCCh
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (539)
.+|.|||+|-.|+.++..|+..|+ +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 489999999999999999999997 899999876
No 434
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.81 E-value=0.014 Score=56.86 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
|||.|.|+ |.+|+.++..|.++||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999997 99999999999999999999999864
No 435
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.79 E-value=0.013 Score=59.51 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
+||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3799999999999999999999999999997643
No 436
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.77 E-value=0.19 Score=48.84 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc-CCccC--
Q 009256 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSE-- 384 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~-- 384 (539)
++|..||+|..|.+... +++ .|.+|+.+|++++.++.+++..... |. .++++. .|...
T Consensus 124 ~rVLDIGcG~G~~ta~~-lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGIL-LSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVID 185 (298)
T ss_dssp CEEEEECCCSSCHHHHH-HHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGG
T ss_pred CEEEEECCCccHHHHHH-HHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCC
Confidence 48999999997654332 343 5889999999999999887654321 11 112211 11111
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEec
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ 422 (539)
-...|+|+.+.. ..-+..+++++...++|+..++..
T Consensus 186 d~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 186 GLEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GCCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 246899997654 344668899999999998766543
No 437
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.72 E-value=0.039 Score=46.30 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=56.3
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 009256 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (539)
Q Consensus 308 ~~kI~iIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (539)
.++|+|||+ +..|..+..+|.+.||+|+.+++..+.+ .......+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 468999998 5678999999999999999988764321 1234455665
Q ss_pred CCCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEE
Q 009256 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (539)
Q Consensus 384 ~~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~ 420 (539)
++.+.|+++.++| .+....++++..+.= ...++.
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~g-~k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSLK-PKRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHHC-CSEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhcC-CCEEEE
Confidence 5544999999998 555556777765542 234543
No 438
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.71 E-value=0.033 Score=54.48 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.1
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
+++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999995 9999999999999999999999983
No 439
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.68 E-value=0.02 Score=58.20 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=48.0
Q ss_pred cceEEEEc-CCCCcHH-HH----HHHHHCC-CeE----------EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHH
Q 009256 308 VRKVAVIG-GGLMGSG-IA----TAHILNN-IYV----------VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 370 (539)
Q Consensus 308 ~~kI~iIG-~G~mG~~-iA----~~l~~~G-~~V----------~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 370 (539)
..||+||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+...+..
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~------------------- 66 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRF------------------- 66 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHT-------------------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHh-------------------
Confidence 34899999 9999998 66 6666543 333 49999999887764321
Q ss_pred HHhhcccccCCc-cCC--CCcCEEEEcccCChh
Q 009256 371 NALKMLKGVLDY-SEF--KDVDMVIEAVIESVP 400 (539)
Q Consensus 371 ~~~~~i~~~~~~-~~~--~~aDlVi~avpe~~~ 400 (539)
+.-...+|+ +.+ .+.|+|++++|....
T Consensus 67 ---~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 67 ---NIARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp ---TCCCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred ---CCCcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 111234555 333 358999999997665
No 440
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.67 E-value=0.025 Score=56.42 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.5
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
.++|.|.|+ |.+|+.++..|++.|++|++++|++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 458999995 99999999999999999999999654
No 441
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.67 E-value=0.03 Score=52.66 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=36.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
.++|.|.|+ |-+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 46 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL 46 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 356778875 8899999999999999999999999887766543
No 442
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.56 E-value=0.06 Score=53.08 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=28.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCeE-EEEeCChHH
Q 009256 309 RKVAVIGGGLMGSGIATAHIL--NNIYV-VLKEVNSEY 343 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~--~G~~V-~~~d~~~~~ 343 (539)
.||+|||+|.+|..++..+.+ .+.++ .++|+++++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 489999999999999999865 35554 467999776
No 443
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.56 E-value=0.038 Score=58.62 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=32.5
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHH
Q 009256 308 VRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEY 343 (539)
Q Consensus 308 ~~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (539)
+++|.|.| .|.+|+.++..|++.|++|++++|++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 45899999 5999999999999999999999998754
No 444
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.49 E-value=0.022 Score=56.65 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=43.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC---------CeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 009256 309 RKVAVIGGGLMGSGIATAHILNN---------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G---------~~V-~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (539)
.+|+|||+|.||..++..+.+.. .+| .++|+++++.+ + +. ....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~----------------~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR----------------A-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC----------------S-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh----------------c-cC---------cccc
Confidence 47999999999999999988763 455 46688754311 1 11 1123
Q ss_pred cCCc-cCCCCcCEEEEcccCCh
Q 009256 379 VLDY-SEFKDVDMVIEAVIESV 399 (539)
Q Consensus 379 ~~~~-~~~~~aDlVi~avpe~~ 399 (539)
++|+ +.+ +.|+|++|+|...
T Consensus 58 ~~d~~~ll-~iDvVve~t~~~~ 78 (332)
T 2ejw_A 58 RAEPFDLL-EADLVVEAMGGVE 78 (332)
T ss_dssp ESSCCCCT-TCSEEEECCCCSH
T ss_pred cCCHHHHh-CCCEEEECCCCcH
Confidence 5566 445 9999999998653
No 445
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.30 E-value=0.023 Score=56.39 Aligned_cols=36 Identities=28% Similarity=0.459 Sum_probs=28.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC---------CCeEE-EEeCChHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEY 343 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~ 343 (539)
|.||+|||+|.||..++..+.+. +++|+ ++|++++.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~ 47 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSI 47 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEE
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHh
Confidence 45899999999999999999875 45555 55777544
No 446
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.29 E-value=0.068 Score=53.50 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (539)
++|+|+|.|++|...|..+...|.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 58999999999999999999999999999999764
No 447
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.25 E-value=0.17 Score=48.14 Aligned_cols=42 Identities=31% Similarity=0.453 Sum_probs=35.6
Q ss_pred eEEEE-c-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 310 KVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 310 kI~iI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
|+++| | .+-+|.++|..|++.|.+|+++|++++.++...+++
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 56666 5 577899999999999999999999999888776654
No 448
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=94.25 E-value=0.033 Score=54.25 Aligned_cols=91 Identities=16% Similarity=-0.034 Sum_probs=56.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
.||+|+|+ |.||...+..+.+.|++ .++..||.+... + ...+....++ +...
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~--~-----------------------~~G~~vy~sl~el~~ 61 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGT--T-----------------------HLGLPVFNTVREAVA 61 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC--E-----------------------ETTEEEESSHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccc--e-----------------------eCCeeccCCHHHHhh
Confidence 48999998 99999999999988998 455666532100 0 0123334455 3344
Q ss_pred --CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 387 --DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 387 --~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
++|++++++|... ...++.+..+. .-..++ ..+.+.+..
T Consensus 62 ~~~~D~viI~tP~~~--~~~~~~ea~~~-Gi~~iV-i~t~G~~~~ 102 (288)
T 2nu8_A 62 ATGATASVIYVPAPF--CKDSILEAIDA-GIKLII-TITEGIPTL 102 (288)
T ss_dssp HHCCCEEEECCCGGG--HHHHHHHHHHT-TCSEEE-ECCCCCCHH
T ss_pred cCCCCEEEEecCHHH--HHHHHHHHHHC-CCCEEE-EECCCCCHH
Confidence 7999999999543 44555554442 223333 345566654
No 449
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=94.24 E-value=0.12 Score=56.50 Aligned_cols=78 Identities=19% Similarity=0.214 Sum_probs=53.9
Q ss_pred CCCcEEEEEcCccccchhHhhhccCEEEeeCCceEeCCcccCCCCCCcchhhccccccCHHHHHHHHHcCCCC--CH---
Q 009256 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TS--- 171 (539)
Q Consensus 97 ~~~p~iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~--~a--- 171 (539)
...|+|+.|.|.|.|||..++..||++|+.+++.+.+. |+. +.+. .+|+.+ +.
T Consensus 258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~lt--------------------Gp~-vi~~-~~Ge~vy~s~e~L 315 (793)
T 2x24_A 258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIILT--------------------GAT-ALNK-VLGRDVYTSNNQL 315 (793)
T ss_dssp HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEESS--------------------CHH-HHHH-HHSSCCCSCHHHH
T ss_pred CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEec--------------------CHH-HHHH-hcCCcccCChhhh
Confidence 46999999999999999999999999999998766543 111 1111 345554 32
Q ss_pred ---HHHHHcCCcceecCcc-hHHHHHHHH
Q 009256 172 ---EEGWKLGLIDAVVTSE-ELLKVSRLW 196 (539)
Q Consensus 172 ---~eA~~~Glv~~vv~~~-~l~~~a~~~ 196 (539)
+-....|++|.++++| +..+.+.+|
T Consensus 316 GGa~v~~~~Gv~d~vv~dd~ea~~~ir~~ 344 (793)
T 2x24_A 316 GGVQIMHHNGVSHVTVPDDFEGVCTILEW 344 (793)
T ss_dssp HSHHHHTTTTSCSEEESSHHHHHHHHHHH
T ss_pred ccHHHHHhcCceEEEeCCHHHHHHHHHHH
Confidence 2255789999999875 333333333
No 450
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.19 E-value=0.065 Score=53.82 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=29.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCCh
Q 009256 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (539)
Q Consensus 310 kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (539)
+|.|||+|..|+.++..|+..|. +++++|.+.
T Consensus 120 ~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 120 KVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 79999999999999999999997 899999874
No 451
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.19 E-value=0.082 Score=50.33 Aligned_cols=43 Identities=23% Similarity=0.171 Sum_probs=36.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++|.|.|+ |-+|..++..|++.|++|++.+++++..+...+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRI 51 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45777775 88999999999999999999999998877665544
No 452
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.18 E-value=0.041 Score=54.82 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=33.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 345 (539)
++|.|+|.|..|..++..|.+.|+ |+++|+|++.++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 479999999999999999999999 999999999877
No 453
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.17 E-value=0.075 Score=49.66 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=37.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++++.|.|+ |-+|..++..|++.|++|++.+++++.++...+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 46 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL 46 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356777775 78999999999999999999999999887776554
No 454
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.16 E-value=0.072 Score=53.16 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=47.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCC--CCHHHHHHHhh--cccccCCc
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGK--LTQDKANNALK--MLKGVLDY 382 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~--~i~~~~~~ 382 (539)
.||||+|+|.||..+++.+.++ +.+|+ +.|++++.......+ .+. .........++ .+....+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~----------~g~~~~~~~~~~~~~~~~~v~v~~~~ 71 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR----------RGIRIYVPQQSIKKFEESGIPVAGTV 71 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH----------TTCCEECCGGGHHHHHTTTCCCCCCH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh----------cCcceecCcCHHHHhcccccccccCH
Confidence 4899999999999999998875 45665 557776554433221 110 11101111111 12233344
Q ss_pred cC-CCCcCEEEEcccCCh
Q 009256 383 SE-FKDVDMVIEAVIESV 399 (539)
Q Consensus 383 ~~-~~~aDlVi~avpe~~ 399 (539)
+. +.++|+||+|.|...
T Consensus 72 e~l~~~vDvV~~aTp~~~ 89 (340)
T 1b7g_O 72 EDLIKTSDIVVDTTPNGV 89 (340)
T ss_dssp HHHHHHCSEEEECCSTTH
T ss_pred hHhhcCCCEEEECCCCch
Confidence 22 457999999998654
No 455
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.14 E-value=0.047 Score=51.61 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=34.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (539)
++|.|.|+ |.+|..++..|++.|++|++.+|+++.++...+
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ 53 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46777775 899999999999999999999999887766544
No 456
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=94.07 E-value=0.034 Score=52.03 Aligned_cols=40 Identities=18% Similarity=0.067 Sum_probs=33.6
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (539)
++|.|.| .|.+|..++..|++.|++|++.+++++.++...
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 46 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA 46 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 3577776 589999999999999999999999988766543
No 457
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=94.04 E-value=0.23 Score=47.02 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=32.1
Q ss_pred ceEEEE-c-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
+|+.+| | .+-+|.++|..|++.|.+|++.|++++.++..
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~ 42 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF 42 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 455555 5 57799999999999999999999998876654
No 458
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.02 E-value=0.046 Score=50.30 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (539)
+||.|+|+ |.+|+.++..|+++|++|++++|+++..+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 37999995 999999999999999999999999877554
No 459
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=94.01 E-value=0.026 Score=55.67 Aligned_cols=36 Identities=14% Similarity=0.063 Sum_probs=30.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEE-EEeCChHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVV-LKEVNSEY 343 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~-~~d~~~~~ 343 (539)
|.||+|||+ |.||...+..+.+.+.+|+ ++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 468999999 7899999999998887654 77998765
No 460
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.99 E-value=0.04 Score=59.35 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-eEEEEeCCh
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (539)
.+|.|||+|.+|+.++..|+..|+ +++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 379999999999999999999998 999999764
No 461
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.96 E-value=0.064 Score=52.01 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=57.5
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 009256 309 RKVAVIG-GGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 384 (539)
.||+|+| .|.||..++..+.+. +++++ ++|+++..... ..+ ......+. ..+..++|+ +.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G--~d~----gel~G~~~----------~gv~v~~dl~~l 85 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD--KDA----SILIGSDF----------LGVRITDDPESA 85 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT--SBG----GGGTTCSC----------CSCBCBSCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc--cch----HHhhccCc----------CCceeeCCHHHH
Confidence 4899999 899999999998754 67766 45876431000 000 00000000 134456676 55
Q ss_pred CCCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCChH
Q 009256 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (539)
Q Consensus 385 ~~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~~~ 429 (539)
+.++|+||+..+ ++..... +...+..+.-+++.|++.+..
T Consensus 86 l~~aDVvIDFT~--p~a~~~~---~~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 86 FSNTEGILDFSQ--PQASVLY---ANYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp TTSCSEEEECSC--HHHHHHH---HHHHHHHTCEEEECCCCCCHH
T ss_pred hcCCCEEEEcCC--HHHHHHH---HHHHHHcCCCEEEECCCCCHH
Confidence 789999999875 3322232 333333455555667777654
No 462
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=93.93 E-value=0.028 Score=55.65 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=30.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCeEE-EEeCChHH
Q 009256 308 VRKVAVIGG-GLMGSGIATAHILNNIYVV-LKEVNSEY 343 (539)
Q Consensus 308 ~~kI~iIG~-G~mG~~iA~~l~~~G~~V~-~~d~~~~~ 343 (539)
|.||||||+ |.||...+..+.+.|.+++ ++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 468999999 7999999999998887654 77998764
No 463
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.92 E-value=0.063 Score=53.44 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=28.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEEEE-eC--ChHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLLK 346 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~-d~--~~~~~~~ 346 (539)
.||+|+|+|.+|..+++.+.++ +++|+.+ |+ +++....
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ 45 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTY 45 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHH
Confidence 4899999999999999998876 5676655 42 4444433
No 464
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=93.90 E-value=0.11 Score=49.28 Aligned_cols=43 Identities=26% Similarity=0.196 Sum_probs=36.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35666775 78999999999999999999999999887776554
No 465
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.88 E-value=0.079 Score=50.50 Aligned_cols=43 Identities=16% Similarity=0.263 Sum_probs=35.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++|.|.|+ |-+|..++..|++.|++|++.+|+++.++...+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL 51 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 45777775 88999999999999999999999998777665443
No 466
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.88 E-value=0.038 Score=53.29 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=32.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHC--CCeEEEEeCChHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILN--NIYVVLKEVNSEYLL 345 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~ 345 (539)
++|.|.|+ |.+|+.++..|++. |++|++++|+++..+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 36889986 99999999999998 999999999976544
No 467
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.85 E-value=0.099 Score=49.52 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEEEcC-CCCcHHHHHHHHHC-CCeEE-EEeCC
Q 009256 310 KVAVIGG-GLMGSGIATAHILN-NIYVV-LKEVN 340 (539)
Q Consensus 310 kI~iIG~-G~mG~~iA~~l~~~-G~~V~-~~d~~ 340 (539)
||+|+|+ |.||..++..+.+. |++|+ ++|++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 7999996 99999999998865 89887 55654
No 468
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.83 E-value=0.082 Score=52.19 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=37.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~ 352 (539)
++|.|.|+ |-+|..++..|++.|++|++.+++++.++...+.+.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~ 53 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE 53 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46777875 889999999999999999999999998887766543
No 469
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=93.82 E-value=0.088 Score=49.84 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=48.6
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCc
Q 009256 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (539)
Q Consensus 310 kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (539)
++.|.| .|-+|..++..|++.|++|++.+++++.++...+.+... ...+..+.-+.+........+. +.....
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~-----~~~g~i 75 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-LYIAQLDVRNRAAIEEMLASLP-----AEWCNI 75 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTT-EEEEECCTTCHHHHHHHHHTSC-----TTTCCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCc-eEEEEcCCCCHHHHHHHHHHHH-----HhCCCC
Confidence 455666 589999999999999999999999998776654432100 0011122223333333322221 334578
Q ss_pred CEEEEcc
Q 009256 389 DMVIEAV 395 (539)
Q Consensus 389 DlVi~av 395 (539)
|++|.+.
T Consensus 76 D~lvnnA 82 (248)
T 3asu_A 76 DILVNNA 82 (248)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 8888765
No 470
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.77 E-value=0.043 Score=55.03 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=30.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 340 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~ 340 (539)
..|.|||+|.+|.+.|..|+++|++|+++|++
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 47999999999999999999999999999974
No 471
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.76 E-value=0.34 Score=45.99 Aligned_cols=42 Identities=24% Similarity=0.265 Sum_probs=35.8
Q ss_pred ceEEEEcC-C-CCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGG-G-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~-G-~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
++|.|.|+ | -+|..++..|++.|++|++.+++++.++...+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 66 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQ 66 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH
Confidence 46778898 8 499999999999999999999999887766443
No 472
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.70 E-value=0.027 Score=59.27 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
|++|.|||+|.-|.+-|..|+++|++|++++.+..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 67999999999999999999999999999998753
No 473
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.69 E-value=0.099 Score=50.57 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=35.2
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 310 kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++.|.| .|-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI 77 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 455556 588999999999999999999999998887766554
No 474
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.67 E-value=0.03 Score=56.35 Aligned_cols=32 Identities=31% Similarity=0.359 Sum_probs=30.2
Q ss_pred EEEEcCCCCcHHHHHHHHHCCCeEEEEeCChH
Q 009256 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (539)
Q Consensus 311 I~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (539)
|.|||+|.-|.+.|..|+++|++|+++|+.++
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 99999999999999999999999999998653
No 475
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.67 E-value=0.12 Score=49.43 Aligned_cols=43 Identities=26% Similarity=0.227 Sum_probs=35.4
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++|.|.| .|-+|..++..|++.|++|++.+|+++.++...+.+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 65 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4566777 488999999999999999999999988776654443
No 476
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.67 E-value=0.035 Score=53.64 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=33.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCChHH
Q 009256 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (539)
+++|.|.|+|.+|+.++..|++.|++|++++|+++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 468999999999999999999999999999998654
No 477
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.66 E-value=0.082 Score=50.88 Aligned_cols=42 Identities=17% Similarity=0.081 Sum_probs=34.8
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
+++.|.| .|-+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~ 64 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGE 64 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 4566666 58999999999999999999999999877765443
No 478
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.60 E-value=0.073 Score=53.26 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=54.9
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 009256 308 VRKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (539)
Q Consensus 308 ~~kI~iIG-~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 385 (539)
+.||+|+| .|.+|..+.+.|.++.. +++.+......-.+. .... +.+.. ...+.+. +.+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~--------~~~~--~~~~g------~~~~~~~-~~~~~ 66 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPV--------HFVH--PNLRG------RTNLKFV-PPEKL 66 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBG--------GGTC--GGGTT------TCCCBCB-CGGGC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchh--------HHhC--chhcC------ccccccc-chhHh
Confidence 45899999 69999999999987654 777665432211110 0000 00000 0011111 12235
Q ss_pred CCcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 386 ~~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
.++|+||+|+|.... .+... .++..++.+++.++...
T Consensus 67 ~~vDvV~~a~g~~~s--~~~a~---~~~~aG~~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLALPHGVF--AREFD---RYSALAPVLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECCCTTHH--HHTHH---HHHTTCSEEEECSSTTS
T ss_pred cCCCEEEEcCCcHHH--HHHHH---HHHHCCCEEEEcCcccc
Confidence 789999999986553 23333 23356777788777543
No 479
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.60 E-value=0.4 Score=46.09 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 67 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDG 67 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45666674 8899999999999999999999999887766543
No 480
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.58 E-value=0.094 Score=49.24 Aligned_cols=43 Identities=19% Similarity=0.139 Sum_probs=35.3
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++|.|.| .|.+|..++..|++.|++|++.+++++..+...+.+
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI 51 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 3566776 589999999999999999999999988777654443
No 481
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.58 E-value=0.27 Score=47.87 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=31.2
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEY 343 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (539)
++|.|.| .|.+|+.++..|++.|++|++++|++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 5899999 5999999999999999999999998544
No 482
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.56 E-value=0.074 Score=51.20 Aligned_cols=42 Identities=21% Similarity=0.190 Sum_probs=35.4
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
++|.|.| .|.+|..++..|++.|++|++.+++++.++...+.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 75 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE 75 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence 4677777 48999999999999999999999999877765443
No 483
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=93.53 E-value=0.058 Score=51.53 Aligned_cols=41 Identities=22% Similarity=0.174 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (539)
++|.|.|+ |-+|..++..|++.|++|++.+|+++..+...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA 49 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45777774 889999999999999999999999887665543
No 484
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.53 E-value=0.1 Score=50.70 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=32.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCC-CeEEEEeCChHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 344 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G-~~V~~~d~~~~~~ 344 (539)
++|.|.|+ |.+|..++..|++.| ++|++.+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~ 43 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence 57999997 999999999999988 9999999997653
No 485
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.50 E-value=0.072 Score=50.31 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=33.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (539)
+++.|.|+ |-+|..++..|++.|++|++.+|+++.++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 45 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46777775 8899999999999999999999998876654
No 486
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.44 E-value=0.081 Score=50.13 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=35.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
++|.|.|+ |.+|..++..|+++|++|++.+++++..+...+.
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 56 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVED 56 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46778875 8999999999999999999999998876655443
No 487
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.41 E-value=0.052 Score=51.90 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=31.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 345 (539)
++|.|.|+ |-+|..+|..|++.|++|++.+++++...
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 35666674 88999999999999999999999987643
No 488
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=93.40 E-value=0.19 Score=50.26 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=25.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCeEEEEe
Q 009256 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 338 (539)
Q Consensus 307 ~~~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~d 338 (539)
.+.||+|+|+|.+|..+.+.+.++ .++|+.++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 345899999999999999999876 57777664
No 489
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=93.40 E-value=0.089 Score=50.29 Aligned_cols=43 Identities=26% Similarity=0.285 Sum_probs=35.7
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
++|.|.| .|-+|..++..|++.|++|++.+++++.++...+.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 57 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAV 57 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4566777 588999999999999999999999998877665443
No 490
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=93.39 E-value=0.9 Score=47.93 Aligned_cols=159 Identities=15% Similarity=0.091 Sum_probs=95.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCcccCCCchhhhhhcCCCcccccchHHHHHHHHHHHhCCCcEEEEE
Q 009256 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (539)
Q Consensus 26 Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~iaav 105 (539)
-.++++-.+...+.++.++.. .+-+|.|.-.+ .|..|.+-.+ .-.......++ .++.+.+.|+|+.|
T Consensus 366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E~----------~Gi~~~gAk~~-~a~~~a~vP~itvi 432 (555)
T 3u9r_B 366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNIT-GFMVGQKYEA----------GGIAKHGAKLV-TAVACARVPKFTVL 432 (555)
T ss_dssp SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC-CBCCSHHHHH----------TTHHHHHHHHH-HHHHHCCSCEEEEE
T ss_pred CccCHHHHHHHHHHHHHHhcC-CCCEEEEecCc-CCCCCHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 578899998888888888654 46667764332 3666654221 11222344555 67899999999999
Q ss_pred cCccccchhHhh----hccCEEEeeCCceEeCCcccCCCCCCcchhhccc---cc----cC----H--HHHH-H-HHH-c
Q 009256 106 EGLALGGGLELA----MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP---RL----VG----L--SKAI-E-MML-L 165 (539)
Q Consensus 106 ~G~a~GgG~~la----l~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~---r~----vG----~--~~a~-~-l~l-~ 165 (539)
-|.++|||..-. +.+|+++|.++++++. +.+-|....|- +. .| . ..+. + +.- -
T Consensus 433 ~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~V-------mgpegaa~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~y 505 (555)
T 3u9r_B 433 IGGSFGAGNYGMCGRAYDPRFLWMWPNARIGV-------MGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQY 505 (555)
T ss_dssp EEEEETTHHHHTTCGGGCCSEEEECTTCEEES-------SCHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred eCCccchhhHhhcCccCCCCeEEEcCCcEEEc-------CCHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHH
Confidence 999988864332 2479999988888773 33333333222 10 00 0 0000 0 000 0
Q ss_pred CCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcC
Q 009256 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (539)
Q Consensus 166 g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (539)
-+..++-.|-+.|+||.|+++.+.........+.+...+
T Consensus 506 ~~~~~p~~aa~r~~vD~vIdP~~TR~~l~~~l~~~~~~~ 544 (555)
T 3u9r_B 506 EHQGHPYYSSARLWDDGVIDPAQTREVLALALSAALNAP 544 (555)
T ss_dssp HHHHSHHHHHHTTSSSCBCCGGGHHHHHHHHHHHHTTSC
T ss_pred HHhCCHHHHhhccccCcccChHHHHHHHHHHHHHHhcCC
Confidence 112366667788999999999888776665555554443
No 491
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.36 E-value=0.23 Score=47.33 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=36.2
Q ss_pred eEEEE--cCCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 310 KVAVI--GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 310 kI~iI--G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
|+++| |.+-+|.++|..|++.|.+|++.|++++.+++..+.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l 53 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL 53 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 67777 4678999999999999999999999999888775544
No 492
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.34 E-value=0.28 Score=47.22 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=34.2
Q ss_pred eEEEE-c-CCCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 009256 310 KVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (539)
Q Consensus 310 kI~iI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (539)
||++| | .+-+|.++|..|++.|.+|++.|++++.++...+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 67766 5 4679999999999999999999999998877644
No 493
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=93.34 E-value=0.078 Score=50.27 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=36.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~i 351 (539)
+++.|.|+ |-+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35666675 88999999999999999999999999888776654
No 494
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=93.31 E-value=0.11 Score=49.36 Aligned_cols=77 Identities=16% Similarity=0.043 Sum_probs=49.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (539)
++|+++|.|.||..++.. . +++++ +|+ ++ . +.+ .+..++|. +.+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k---~--------------gel----------gv~a~~d~d~lla 59 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RI---S--------------KDI----------PGVVRLDEFQVPS 59 (253)
T ss_dssp CEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SS---C--------------CCC----------SSSEECSSCCCCT
T ss_pred ceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cc---c--------------ccc----------CceeeCCHHHHhh
Confidence 489999999999999998 4 88774 556 21 1 000 23445666 4457
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~t 423 (539)
++|+|++|.+ .+ .+-+.+.+.+..+.=+++.+
T Consensus 60 ~pD~VVe~A~--~~---av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 60 DVSTVVECAS--PE---AVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp TCCEEEECSC--HH---HHHHHHHHHTTSSSEEEECC
T ss_pred CCCEEEECCC--HH---HHHHHHHHHHHCCCCEEEcC
Confidence 9999999985 32 22223566677766554444
No 495
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.28 E-value=0.034 Score=55.28 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHH---CCCeEEEEeCC
Q 009256 308 VRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVN 340 (539)
Q Consensus 308 ~~kI~iIG~G~mG~~iA~~l~~---~G~~V~~~d~~ 340 (539)
|.+|.|||+|..|.+.|..|++ +|++|+++|++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~ 36 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA 36 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECC
Confidence 3579999999999999999999 99999999976
No 496
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.25 E-value=0.44 Score=44.85 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=35.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 009256 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (539)
Q Consensus 309 ~kI~iIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (539)
++|.|.|+ |-+|..+|..|++.|++|++++++++.++...+.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQ 52 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 46777775 8899999999999999999999999887776554
No 497
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=93.25 E-value=0.14 Score=50.87 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=29.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCeEEEE-eC--ChHHHHHH
Q 009256 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLLKG 347 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~-G~~V~~~-d~--~~~~~~~~ 347 (539)
.||||+|+|.+|..+++.+.++ +.+|+.+ |+ +++.+..+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l 46 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYM 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHH
Confidence 4899999999999999998764 5787655 53 55554443
No 498
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.25 E-value=0.13 Score=51.79 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=56.2
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 386 (539)
.||+|+| .|.+|..+.+.|.++.. +|+.+....+.-.+..+ .... . .+... ..+.... .+.+.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~----~~~~-~-~~~v~--------~dl~~~~-~~~~~ 81 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMES----VFPH-L-RAQKL--------PTLVSVK-DADFS 81 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHH----HCGG-G-TTSCC--------CCCBCGG-GCCGG
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHH----hCch-h-cCccc--------ccceecc-hhHhc
Confidence 4899999 79999999999988754 77766543221111100 0000 0 01000 0111111 23456
Q ss_pred CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 009256 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (539)
Q Consensus 387 ~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~~ 427 (539)
++|+||+|+|..... + ....+ ..++.++++++...
T Consensus 82 ~vDvVf~atp~~~s~--~---~a~~~-~aG~~VId~sa~~R 116 (359)
T 1xyg_A 82 TVDAVFCCLPHGTTQ--E---IIKEL-PTALKIVDLSADFR 116 (359)
T ss_dssp GCSEEEECCCTTTHH--H---HHHTS-CTTCEEEECSSTTT
T ss_pred CCCEEEEcCCchhHH--H---HHHHH-hCCCEEEECCcccc
Confidence 899999999866642 2 22344 66788888887654
No 499
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.24 E-value=0.052 Score=48.36 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=31.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCeEEEEeCCh
Q 009256 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (539)
Q Consensus 309 ~kI~iIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (539)
.+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999875
No 500
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=93.24 E-value=0.11 Score=52.18 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=54.9
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcC---CCCHHHHHHHhhccccc-CCc
Q 009256 309 RKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRG---KLTQDKANNALKMLKGV-LDY 382 (539)
Q Consensus 309 ~kI~iIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~i~~~-~~~ 382 (539)
.||+|+| .|.+|..+.+.|.++. ++|+.+.+++....+... ...... .+.... ..+.+. .+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~ 76 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYK-------DACYWFQDRDIPENI-----KDMVVIPTDP 76 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHH-------HHSCCCCSSCCCHHH-----HTCBCEESCT
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHH-------HhcccccccccccCc-----eeeEEEeCCH
Confidence 5899999 7999999999998764 588777543221111000 000000 000000 112221 133
Q ss_pred cCC-C-CcCEEEEcccCChhHHHHHHHHHHHhCCCCeEEEecCCCC
Q 009256 383 SEF-K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (539)
Q Consensus 383 ~~~-~-~aDlVi~avpe~~~~~~~~~~~l~~~~~~~~ii~s~ts~~ 426 (539)
+.+ + ++|+||+|+|... ..+....+ +..++.|+++++..
T Consensus 77 ~~~~~~~~DvV~~atp~~~--~~~~a~~~---~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 77 KHEEFEDVDIVFSALPSDL--AKKFEPEF---AKEGKLIFSNASAY 117 (354)
T ss_dssp TSGGGTTCCEEEECCCHHH--HHHHHHHH---HHTTCEEEECCSTT
T ss_pred HHHhcCCCCEEEECCCchH--HHHHHHHH---HHCCCEEEECCchh
Confidence 344 6 8999999998433 33333333 33567788877654
Done!