BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009257
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27707|DCK_HUMAN Deoxycytidine kinase OS=Homo sapiens GN=DCK PE=1 SV=1
Length = 260
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 23/196 (11%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDV--GPDHF-----------NI 272
+EGNI+ GK+TF+ + +L + E+VPEP+ +W +V D F N+
Sbjct: 26 IEGNIAAGKSTFVNILK----QLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81
Query: 273 LGAYYDAPERYAYTFQNYVFVTRVMQERESSGGI-----KPLRLMERSVFSDRMVFVRAV 327
L Y+ PER+++TFQ Y ++R+ + S G KP+ ERSV+SDR +F +
Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141
Query: 328 HEAKYMNEMEISIYDSWFDPVVSVL-PGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVS 386
+E++ MNE E +IY W D + + L DG IYL+A+P+TC R+ LR R EE G+
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201
Query: 387 LDYLRSLHEKHENWLF 402
L+YL LH KHE+WL
Sbjct: 202 LEYLEKLHYKHESWLL 217
>sp|P48769|DCK_RAT Deoxycytidine kinase OS=Rattus norvegicus GN=Dck PE=2 SV=1
Length = 260
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 135/273 (49%), Gaps = 60/273 (21%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDV--GPDHF-----------NI 272
+EGNI+ GK+TF+ N ++ + E+VPEP+ +W +V D F N+
Sbjct: 26 IEGNIAAGKSTFV----NILKQVCEDWEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81
Query: 273 LGAYYDAPERYAYTFQNYVFVTRVMQERESSGGI-----KPLRLMERSVFSDRMVFVRAV 327
L Y+ PER+++ FQ+Y ++R+ + S G KP+ ERSV+SDR +F +
Sbjct: 82 LQMMYEKPERWSFIFQSYACLSRIRAQLASLNGSLRDAEKPVLFFERSVYSDRYIFASNL 141
Query: 328 HEAKYMNEMEISIYDSWFDPVVSVL-PGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVS 386
+E+ MNE E +IY W D + S L DG IYLRA+P+ C R+ +R R EE G+
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQGIP 201
Query: 387 LDYLRSLHEKHENWLFPFESGNHGVLAVSKLPLHIDNGLHPDIRDRVFYLDGPHMHSSIQ 446
L+YL LH KHE+WL LH ++ YL Q
Sbjct: 202 LEYLEKLHYKHESWL-----------------------LHRTLKTNFEYL---------Q 229
Query: 447 KVPALVLDCEPNIDFSRDIDLKRQYARQVAEFF 479
+VP L LD N+DF D + +V EF
Sbjct: 230 EVPILTLDV--NLDFK---DKEESLVEKVKEFL 257
>sp|P43346|DCK_MOUSE Deoxycytidine kinase OS=Mus musculus GN=Dck PE=1 SV=1
Length = 260
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 133/273 (48%), Gaps = 60/273 (21%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDV--GPDHF-----------NI 272
+EGNI+ GK+TF+ + + + E+VPEP+ +W +V + F N+
Sbjct: 26 IEGNIAAGKSTFVNILKQASEDW----EVVPEPVARWCNVQSTQEEFEELTTSQKSGGNV 81
Query: 273 LGAYYDAPERYAYTFQNYVFVTRVMQERESSGGI-----KPLRLMERSVFSDRMVFVRAV 327
L Y+ PER+++TFQ+Y ++R+ + S G KP+ ERSV+SDR +F +
Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141
Query: 328 HEAKYMNEMEISIYDSWFDPVVSVL-PGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVS 386
+E+ MNE E +IY W D + S L DG IYLRA+P+ C R+ LR R EE G+
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201
Query: 387 LDYLRSLHEKHENWLFPFESGNHGVLAVSKLPLHIDNGLHPDIRDRVFYLDGPHMHSSIQ 446
L+YL LH KHE+WL LH ++ YL Q
Sbjct: 202 LEYLEKLHYKHESWL-----------------------LHRTLKTSFDYL---------Q 229
Query: 447 KVPALVLDCEPNIDFSRDIDLKRQYARQVAEFF 479
+VP L LD N DF D +V EF
Sbjct: 230 EVPVLTLDV--NEDFK---DKHESLVEKVKEFL 257
>sp|Q3MHR2|DCK_BOVIN Deoxycytidine kinase OS=Bos taurus GN=DCK PE=2 SV=1
Length = 260
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 23/196 (11%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDV--GPDHF-----------NI 272
+EGNI+ GK+TF+ N ++ + E+VPEP+ +W +V D F N+
Sbjct: 26 IEGNIAAGKSTFV----NILKQVCEDWEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81
Query: 273 LGAYYDAPERYAYTFQNYVFVTRVMQERESSGGI-----KPLRLMERSVFSDRMVFVRAV 327
L Y+ PER+++TFQ+Y ++R+ + + G KP+ ERSV+SDR +F +
Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNL 141
Query: 328 HEAKYMNEMEISIYDSWFDPVVSVL-PGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVS 386
+E+ MNE E +IY W D + + L DG IYLRA+P+ C R+ LR R EE G+
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201
Query: 387 LDYLRSLHEKHENWLF 402
L+YL LH KHE+WL
Sbjct: 202 LEYLEKLHYKHESWLL 217
>sp|Q9J579|DCK2_FOWPN Probable deoxycytidine kinase FPV151 OS=Fowlpox virus (strain NVSL)
GN=FPV151 PE=3 SV=1
Length = 235
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 12/176 (6%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERYAY 285
+EGNIS GK+T + +++ +V EP+++W+ N+L Y P R+AY
Sbjct: 28 IEGNISAGKSTLINILSDNG------YNVVQEPLEQWRGN-----NLLDKLYKDPSRWAY 76
Query: 286 TFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEISIYDSWF 345
TFQ++ F TR ++ K ++ERSVFSD+ +F A+H+ Y+++ E +IY+ +
Sbjct: 77 TFQSHAFWTRTKTYIDALNKNKGNIILERSVFSDKYIFATALHDIGYIDDTEWNIYNE-Y 135
Query: 346 DPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKHENWL 401
++ + DG IYL+ SPD C+KRM+ R R EE V +DYL LH+KHE WL
Sbjct: 136 SKWMTEFMDIKIDGIIYLKTSPDICYKRMLNRARHEENTVKIDYLNLLHDKHEKWL 191
>sp|Q9N0C5|KITM_MACFA Thymidine kinase 2, mitochondrial OS=Macaca fascicularis GN=TK2
PE=2 SV=1
Length = 265
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 10/191 (5%)
Query: 212 SDDKPAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFN 271
SD + +K+ CVEGNI+ GKTT L+ +N T +E++ EP+ KW++V N
Sbjct: 41 SDKEREKEKKSVICVEGNIASGKTTCLEFFSNATD-----IEVLTEPVSKWRNV--RGHN 93
Query: 272 ILGAYYDAPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAK 331
LG Y R+ T Q YV +T M +R + + +RLMERS+ S R +FV ++ +
Sbjct: 94 PLGLMYQDASRWGLTLQTYVQLT--MLDRHTCPQVSSVRLMERSIHSARYIFVENLYRSG 151
Query: 332 YMNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLR 391
M E++ + WFD ++ + I D +YLR +P+TC++R+ R R EE + L+YL
Sbjct: 152 KMPEVDYVVLSEWFDWILRNMDVSI-DLIVYLRTNPETCYQRLKRRCREEEKVIPLEYLE 210
Query: 392 SLHEKHENWLF 402
++H HE WL
Sbjct: 211 AIHHLHEEWLI 221
>sp|Q16854|DGUOK_HUMAN Deoxyguanosine kinase, mitochondrial OS=Homo sapiens GN=DGUOK PE=1
SV=2
Length = 277
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 126/271 (46%), Gaps = 54/271 (19%)
Query: 224 FCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDV----------GPDHFNIL 273
+EGNI+VGK+TF++ + E + EP+ WQ++ N+L
Sbjct: 41 LSIEGNIAVGKSTFVKLLTKTYPEW----HVATEPVATWQNIQAAGTQKACTAQSLGNLL 96
Query: 274 GAYYDAPERYAYTFQNYVFVTRVMQERESS-----GGIKPLRLMERSVFSDRMVFVRAVH 328
Y P R++YTFQ + F++R+ + E KP+++ ERSV+SDR +F + +
Sbjct: 97 DMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLF 156
Query: 329 EAKYMNEMEISIYDSWFDPVVSVLPGLIP-DGFIYLRASPDTCHKRMMLRKRAEEGGVSL 387
E ++++E IY W ++ I GFIYL+ASP C KR+ R R EE G+ L
Sbjct: 157 ENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIEL 216
Query: 388 DYLRSLHEKHENWLFPFESGNHGVLAVSKLPLHIDNGLHPDIRDRVFYLDGPHMHSSIQK 447
YL LH +HE WL +H LH + ++
Sbjct: 217 AYLEQLHGQHEAWL-----------------IHKTTKLHFE---------------ALMN 244
Query: 448 VPALVLDCEPNIDFSRDIDLKRQYARQVAEF 478
+P LVLD N DFS ++ + R+V F
Sbjct: 245 IPVLVLDV--NDDFSEEVTKQEDLMREVNTF 273
>sp|Q9QX60|DGUOK_MOUSE Deoxyguanosine kinase, mitochondrial OS=Mus musculus GN=Dguok PE=2
SV=3
Length = 277
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 57/281 (20%)
Query: 214 DKPAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHF--- 270
D P++ C+EGNI+VGK+TF++ + E ++ EPI +WQ++
Sbjct: 34 DGGGPRR---LCIEGNIAVGKSTFVKLLMKTHPEW----QVATEPIAEWQNIQAAGAQKD 86
Query: 271 -------NILGAYYDAPERYAYTFQNYVFVTRVMQERESSGGI-----KPLRLMERSVFS 318
N+L Y P R++YTFQ F++R+ + E G K +R+ ERSV+S
Sbjct: 87 GTSKRLGNLLEMMYQEPARWSYTFQTLSFMSRLKVQLEPIPGRLLQAEKSVRVFERSVYS 146
Query: 319 DRMVFVRAVHEAKYMNEMEISIYDSWFDPVVSVLPG-LIPDGFIYLRASPDTCHKRMMLR 377
DR +F + + E ++++E IY W ++ L+ GFIYL+ASP C +R+ R
Sbjct: 147 DRYIFAKNLFENGSLSDIEWHIYQDWHSFLLQEFANRLLLHGFIYLQASPQVCMERLYQR 206
Query: 378 KRAEEGGVSLDYLRSLHEKHENWLFPFESGNHGVLAVSKLPLHIDNGLHPDIRDRVFYLD 437
R EE G+ L YL+ LH +HE+W LH +
Sbjct: 207 DREEEKGIELAYLQQLHSQHEDWFIN-----------KTTKLHFE--------------- 240
Query: 438 GPHMHSSIQKVPALVLDCEPNIDFSRDIDLKRQYARQVAEF 478
++Q VP LVLD DFS + + + QV F
Sbjct: 241 ------ALQHVPVLVLDVTE--DFSENAARQEELMGQVNTF 273
>sp|O00142|KITM_HUMAN Thymidine kinase 2, mitochondrial OS=Homo sapiens GN=TK2 PE=1 SV=4
Length = 265
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 10/190 (5%)
Query: 213 DDKPAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNI 272
D + +K+ CVEGNI+ GKTT L+ +N T VE++ EP+ KW++V N
Sbjct: 42 DKEQEKEKKSVICVEGNIASGKTTCLEFFSNATD-----VEVLTEPVSKWRNV--RGHNP 94
Query: 273 LGAYYDAPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKY 332
LG Y R+ T Q YV +T M +R + + +RLMERS+ S R +FV ++ +
Sbjct: 95 LGLMYHDASRWGLTLQTYVQLT--MLDRHTRPQVSSVRLMERSIHSARYIFVENLYRSGK 152
Query: 333 MNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRS 392
M E++ + WFD ++ + + D +YLR +P+TC++R+ R R EE + L+YL +
Sbjct: 153 MPEVDYVVLSEWFDWILRNMDVSV-DLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEA 211
Query: 393 LHEKHENWLF 402
+H HE WL
Sbjct: 212 IHHLHEEWLI 221
>sp|Q9R088|KITM_MOUSE Thymidine kinase 2, mitochondrial OS=Mus musculus GN=Tk2 PE=1 SV=2
Length = 270
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 208 KDSNSDDKPAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGP 267
KD +D + K+ C+EGNI+ GKTT L+ +N T VE++ EP+ KW++V
Sbjct: 46 KDRENDKE----KKAVVCIEGNIASGKTTCLEFFSNTTD-----VEVLMEPVLKWRNVH- 95
Query: 268 DHFNILGAYYDAPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAV 327
H + Y+DA R+ T Q YV +T M ++ + + P+RLMERS++S R +FV +
Sbjct: 96 GHNPLSLMYHDA-SRWGLTLQTYVQLT--MLDQHTRPQMSPVRLMERSIYSARYIFVENL 152
Query: 328 HEAKYMNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSL 387
+ M E++ +I WFD +V + + D +YLR +P+ C++R+ +R R EE + +
Sbjct: 153 YRGGKMPEVDYAILSEWFDWIVRNIDVSV-DLIVYLRTTPEICYQRLKMRCREEEKVIPM 211
Query: 388 DYLRSLHEKHENWL 401
+YL ++H +E WL
Sbjct: 212 EYLHAIHRLYEEWL 225
>sp|Q9XZT6|DNK_DROME Deoxynucleoside kinase OS=Drosophila melanogaster GN=dnk PE=1 SV=1
Length = 250
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 103/180 (57%), Gaps = 9/180 (5%)
Query: 223 TFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPER 282
T +EGNI GKTT+L N + ++ + ++ EP++KW++V + N+L Y P++
Sbjct: 22 TVLIEGNIGSGKTTYL----NHFEKYKNDICLLTEPVEKWRNV--NGVNLLELMYKDPKK 75
Query: 283 YAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEISIYD 342
+A FQ+YV +T M + ++ K L++MERS+FS R FV + + + + +
Sbjct: 76 WAMPFQSYVTLT--MLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLE 133
Query: 343 SWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKHENWLF 402
W+ + + + D IYLR SP+ ++R+ R R+EE V L YL+ LHE HE+WL
Sbjct: 134 EWYKFIEESI-HVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLI 192
>sp|P21974|DCK1_FOWPN Probable deoxycytidine kinase FPV059 OS=Fowlpox virus (strain NVSL)
GN=FPV059 PE=3 SV=1
Length = 219
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 226 VEGNISVGKTTFLQ--RIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERY 283
+EGNIS GKT L R N + D VE PI+K ++ +++ P R+
Sbjct: 14 IEGNISSGKTDVLNILRNINNVVSFHD-VEDRYTPIEK---------ELIRKFHENPSRW 63
Query: 284 AYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEISIYDS 343
+Y Q + + RV E + + ++ERS+FSDR VF A YM++ E ++Y
Sbjct: 64 SYALQTHYCMKRVRMHLECFVPSR-VNILERSIFSDRYVFAEAATALGYMDDPEWALYCK 122
Query: 344 WFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEG--GVSLDYLRSLHEKHENWL 401
D L + DG IYLR P++C +R+ + E+ +S+DYL++LHEKHE WL
Sbjct: 123 QHDWYTDKLE-IQFDGIIYLRTIPESCKERINEKSITEKNYPNISIDYLKTLHEKHELWL 181
>sp|P28855|KITH_ICHVA Thymidine kinase OS=Ictalurid herpesvirus 1 (strain Auburn) GN=TK
PE=3 SV=1
Length = 228
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 92/196 (46%), Gaps = 43/196 (21%)
Query: 222 ITFCVEGNISVGKTTF----LQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYY 277
+ FCVEGNI GK+T ++R+A V +V EP+D+W V + N L Y
Sbjct: 17 LVFCVEGNIGCGKSTLVKALMERVAGSG------VNVVEEPVDQW--VNHNGKNYLELSY 68
Query: 278 DAPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEME 337
P YA FQN VF + V +R + I MERS S VF AV+ ++ +
Sbjct: 69 TDPTGYAVPFQNLVFDSYVNVQRLQNPDI-----MERSPMSATRVFC-AVNGSRGVIP-- 120
Query: 338 ISIYDSWFDPVVSVLPGLIPDG------------FIYLRASPDTCHKRMMLRKRAEEGGV 385
+ LPG+ G F+YL P+ C +RM R R E GV
Sbjct: 121 -----------ATALPGMAARGEAVMRTIATRPVFVYLELPPEECLRRMRRRDRTGEAGV 169
Query: 386 SLDYLRSLHEKHENWL 401
LDYLR LHE++E WL
Sbjct: 170 GLDYLRLLHERYEAWL 185
>sp|P37529|DCK_BACSU Deoxyadenosine/deoxycytidine kinase OS=Bacillus subtilis (strain
168) GN=dck PE=1 SV=1
Length = 217
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 218 PKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYY 277
PK I V G + VGK+T + +A L E+ DH L +Y
Sbjct: 7 PKNSI-ITVAGTVGVGKSTLTKTLAKRLGFKTSLEEV-------------DHNPYLEKFY 52
Query: 278 DAPERYAYTFQNYVFVTRVMQER---ESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMN 334
ER+++ Q Y R +++ E+ GG + +RS++ D +F + + M+
Sbjct: 53 HDFERWSFHLQIYFLAERFKEQKTIFEAGGGF----VQDRSIYEDTGIFAKMHADKGTMS 108
Query: 335 EMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLH 394
+++ Y S F+ +V PD IYL + R+ R R E S Y +H
Sbjct: 109 KVDYKTYTSLFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMH 168
Query: 395 EKHENWLFPFES 406
++ENW+ F +
Sbjct: 169 TRYENWISGFNA 180
>sp|O55749|VF143_IIV6 Putative kinase protein 143R OS=Invertebrate iridescent virus 6
GN=IIV6-143R PE=3 SV=1
Length = 195
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 225 CVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERYA 284
C++G I GK+T R+ ++L + EPIDKW +L Y+ ++YA
Sbjct: 5 CIDGIIGAGKSTVTHRLK------KNLYKCYEEPIDKW--------TLLPNLYNDMKKYA 50
Query: 285 YTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEISIYDSW 344
FQ V ++ Q S K ++ER ++ + +F + E + I Y++
Sbjct: 51 TPFQFQVLFSQYDQYL-SFKDCKETVVVERCPWTSKNIFTSLMIENNLFDLSAIDTYNNL 109
Query: 345 FDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKH 397
++ + D FIY++ + +R+ R R E +S DYL+SL K+
Sbjct: 110 YERL-----SYQVDHFIYIKVDSEMAFERIKKRDRFAEQNISFDYLKSLENKY 157
>sp|Q54UT2|DGK_DICDI Deoxyguanosine kinase OS=Dictyostelium discoideum GN=dgk PE=1 SV=2
Length = 285
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLV--EIVPEPIDKWQDVGPDHFNILGAYYDAPERY 283
+EGNIS GKT ++ DL+ ++ EP P L +Y P +Y
Sbjct: 37 LEGNISAGKTYLSSKLG-------DLLGYKVFLEP----TATNP----YLSLFYKEPSKY 81
Query: 284 AYTFQNYV-------FVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEM 336
A Q ++ F+ + E+ G+ +++RSV+SD VF ++
Sbjct: 82 ALIMQKWLLNQRYNTFLNALQYSLENEQGV----ILDRSVYSD-WVFAENCRSEGLISAE 136
Query: 337 EISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEK 396
Y+S D +S +P IP+ ++L P C +R+ RKR E + L YL L
Sbjct: 137 GFKEYNSIRDRFLSNIP--IPNVTLFLDVDPKQCLQRIQNRKRDCEQSIPLSYLSGLDNC 194
Query: 397 HENWLFPFESGNHGVLAV 414
++ +L +S V+ +
Sbjct: 195 YKKFLIEMKSKGSNVIIL 212
>sp|Q54YL2|DAK_DICDI Deoxyadenosine kinase OS=Dictyostelium discoideum GN=dak PE=1 SV=1
Length = 245
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 224 FCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERY 283
+ G I GKTT + ++ +L E ID L +Y P++Y
Sbjct: 24 IAISGLIGAGKTTLAVALG----KVLNLPTYFEEVIDNL---------YLQDFYKDPKKY 70
Query: 284 AYTFQNYVFVTRVMQERE----SSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEIS 339
+ Q Y+ +R Q+++ + GG++ +R+++ D VF + ++E+ +++ + +
Sbjct: 71 GFQLQIYLLNSRFQQQQQIIWQARGGVQ-----DRTIYEDS-VFAKMLNESGLLDDRDYN 124
Query: 340 IYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKHEN 399
Y F + + + PD I+L SP+ +R+ LR R E VSL+YL++L+ +
Sbjct: 125 TYCKLFQNLSNFMRR--PDLIIHLDVSPEKSLERIKLRNRDCEKDVSLEYLQNLYNAYHE 182
Query: 400 WL 401
+L
Sbjct: 183 FL 184
>sp|Q197D1|VF143_IIV3 Putative kinase protein 029R OS=Invertebrate iridescent virus 3
GN=IIV3-029R PE=3 SV=1
Length = 193
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 226 VEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERYAY 285
+EG I GK++ + +L+ EP+ W ++L +YD ERYA
Sbjct: 7 IEGIIGSGKSSLMD-------QLKRHYTCHQEPLHDW--------SLLQPFYDDMERYAS 51
Query: 286 TFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYMNEMEISIYDSWF 345
FQ V + + + + + ++ER +S R +F + + + +++ E +Y S++
Sbjct: 52 PFQFQVLFS-FHKLYSTIKNVNDVVILERCPWSSRNIFTKMLVQDGFISPQEYELYMSFY 110
Query: 346 DPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKHE 398
D + + IYL+ P R++ R R E + DYL L+ ++E
Sbjct: 111 DRL-----AFTTNLHIYLKVDPTVAFDRILKRNREAEKTLQYDYLVRLNHQYE 158
>sp|Q6GZP0|DNK_FRG3G Putative deoxynucleoside kinase OS=Frog virus 3 (isolate Goorha)
GN=FV3-085R PE=4 SV=1
Length = 195
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 25/172 (14%)
Query: 228 GNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERYAYTF 287
GNI GK+T L+ + E +VPE +W + + P R+ ++
Sbjct: 11 GNIGAGKSTLLRGLEAAGYE------VVPEDFSRWG-------QLFEMALEDPNRWKFSS 57
Query: 288 QNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAKYM---NEMEISIYDSW 344
Q + + + +R + + ++ER+ A+ + + + ++M + I++
Sbjct: 58 QLKIMLIQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLVQIWEKV 117
Query: 345 FDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEK 396
PV D I+L P+ C +R+ R RA E + ++YL SLH K
Sbjct: 118 NVPV---------DAKIFLNTPPEKCMERIAFRGRAFERDIPVEYLSSLHSK 160
>sp|Q1HVD1|KITH_EBVA8 Thymidine kinase OS=Epstein-Barr virus (strain AG876) GN=TK PE=3
SV=1
Length = 607
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 216 PAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPD-----HF 270
P K + +EG VGKTT L + DL +VPEP+ W V + H
Sbjct: 279 PVIKPACSLFLEGAPGVGKTTMLNHLK---AVFGDLTIVVPEPMRYWTHVYENAIKAMHK 335
Query: 271 NILGAYYDAPERYAYTFQNYVFVT---RVMQERESS-----GGIKPLRLMERSVFSDRMV 322
N+ A + + A + T RV+ R+ S G + + ++ + DR +
Sbjct: 336 NVTRARHGREDTSAEVLACQMKFTTPFRVLASRKRSLLVTESGARSVAPLDCWILHDRHL 395
Query: 323 FVRAVHEAKYMNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEE 382
+V + ++ Y S F V++ D ++++ + + +R+ R R E
Sbjct: 396 LSASVVFPLMLLRSQLLSY-SDFIQVLATFTADPGDTIVWMKLNVEENMRRLKKRGRKHE 454
Query: 383 GGVSLDYLRSL----HEKHENWLF 402
G+ YL+S+ H + WL
Sbjct: 455 SGLDAGYLKSVNDAYHAVYCAWLL 478
>sp|P03177|KITH_EBVB9 Thymidine kinase OS=Epstein-Barr virus (strain B95-8) GN=TK PE=3
SV=2
Length = 607
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 216 PAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPD-----HF 270
P K + +EG VGKTT L + DL +VPEP+ W V + H
Sbjct: 279 PVIKPACSLFLEGAPGVGKTTMLNHLK---AVFGDLTIVVPEPMRYWTHVYENAIKAMHK 335
Query: 271 NILGAYYDAPERYAYTFQNYVFVT---RVMQERESS-----GGIKPLRLMERSVFSDRMV 322
N+ A + + A + T RV+ R+ S G + + ++ + DR +
Sbjct: 336 NVTRARHGREDTSAEVLACQMKFTTPFRVLASRKRSLLVTESGARSVAPLDCWILHDRHL 395
Query: 323 FVRAVHEAKYMNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEE 382
+V + ++ Y S F V++ D ++++ + + +R+ R R E
Sbjct: 396 LSASVVFPLMLLRSQLLSY-SDFIQVLATFTADPGDTIVWMKLNVEENMRRLKKRGRKHE 454
Query: 383 GGVSLDYLRSL----HEKHENWLF 402
G+ YL+S+ H + WL
Sbjct: 455 SGLDAGYLKSVNDAYHAVYCAWLL 478
>sp|Q3KSQ2|KITH_EBVG Thymidine kinase OS=Epstein-Barr virus (strain GD1) GN=TK PE=1 SV=1
Length = 607
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 216 PAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPD-----HF 270
P K + +EG VGKTT L + DL +VPEP+ W V + H
Sbjct: 279 PVIKPACSLFLEGAPGVGKTTMLNHLK---AVFGDLTIVVPEPMRYWTHVYENAIKAMHK 335
Query: 271 NILGAYYDAPERYAYTFQNYVFVT---RVMQERESS-----GGIKPLRLMERSVFSDRMV 322
N+ A + + A + T RV+ R+ S G + + ++ + DR +
Sbjct: 336 NVTRARHGREDTSAEVLACQMKFTTPFRVLASRKRSLLVTESGARSVAPLDCWILHDRHL 395
Query: 323 FVRAVHEAKYMNEMEISIYDSWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEE 382
+V + ++ Y S F V++ D ++++ + + +R+ R R E
Sbjct: 396 LSASVVFPLMLLRSQLLSY-SDFIQVLATFTADPGDTIVWMKLNVEENMRRLKKRGRKHE 454
Query: 383 GGVSLDYLRSL----HEKHENWLF 402
G+ YL+S+ H + WL
Sbjct: 455 SGLDAGYLKSVNDAYHAVYCAWLL 478
>sp|P0C1F9|DGK1_LACAC Deoxyadenosine kinase OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=LBA1949 PE=3 SV=2
Length = 215
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 266 GPDHFNILGAYYDAPERYAYTFQNYVF------VTRVMQERESSGGIKPLRLMERSVFSD 319
G D +L YY +RY + Y+ + + +QE+ S +RS++ D
Sbjct: 34 GVDSNPVLPLYYKDMKRYTFLLNTYLLNHRLAQINQAIQEKNSVS--------DRSIYED 85
Query: 320 RMVFVRAVHEAKYMNEMEISIYDSWFDPVVSVLPG---LIPDGFIYLRASPDTCHKRMML 376
+ F + ++ + E IY+ + ++ PG PD IY+ S DT KR+
Sbjct: 86 ALFF-KMNADSSVADPTEFKIYNDLLENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKK 144
Query: 377 RKRAEEGGVS----LDYLRSLHEKHENW 400
R R+ E + DY L + +E W
Sbjct: 145 RGRSFEQISTDPSLKDYYARLLKYYEPW 172
>sp|Q74I49|DNLJ_LACJO DNA ligase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 /
NCC 533) GN=ligA PE=3 SV=1
Length = 668
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 137 LTIPGVGPRNLRKLVDNG-IGDVAELKQLYKDKFWEAS---QKMIEYLQSSVGIIHKNHA 192
+ I G+GPR +++L+D G I DVA+L QL D+ + +K I L SS+ +N A
Sbjct: 446 MNIMGLGPRIVKQLIDKGFINDVADLYQLTPDQLGQLDHFKEKSITNLLSSIENSKQNSA 505
Query: 193 E 193
E
Sbjct: 506 E 506
>sp|Q4HYQ4|SPT6_GIBZE Transcription elongation factor SPT6 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT6
PE=3 SV=1
Length = 1408
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 109 KTSSSVKVSRRRGGGAGTAPGLVGNPDLLTIPGVGPR 145
K +S +K GG GT LVG+PD +P VGPR
Sbjct: 924 KATSVIKAINANGGAVGTRDELVGDPDSGKLPVVGPR 960
>sp|Q18LE8|KITH_ELHVK Thymidine kinase OS=Elephantid herpesvirus 1 (isolate Asian
elephant/Berlin/Kiba/1998) PE=3 SV=1
Length = 356
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 218 PKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYY 277
P++ +T +EG + VGKTT + + + + EP+D W P+ NIL +
Sbjct: 51 PQRHLTVYLEGCVGVGKTTMFKYVVDNMF----VHTAYDEPMDHWTKWFPE--NILQTIH 104
Query: 278 DA-----PERYAYTFQNYVFVTRVMQERESSGGIK 307
+A E++AY F + RE SG +K
Sbjct: 105 EAVNLPTQEQHAYVFSCQNLIATSFLARE-SGIVK 138
>sp|Q74HC2|DGK2_LACJO Deoxyguanosine kinase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=LJ_1825 PE=1 SV=3
Length = 224
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 272 ILGAYYDAPERYAYTFQNYVFVTRVMQERESSGGIKPLRLMERSVFSDRMVFVRAVHEAK 331
+L +Y+ P++YA+ Q Y TR + S +++RS++ D + F +
Sbjct: 39 VLPLFYENPKKYAFLLQVYFLNTRFRSIK--SALTDDNNVLDRSIYEDALFFQMNADIGR 96
Query: 332 YMNEMEISIYDSWFDPVVSVL---PGLIPDGFIYLRASPDTCHKRMMLRKRAEE----GG 384
E E+ Y ++S L P PD +++ S DT KR+ R R E
Sbjct: 97 ATPE-EVDTYYELLHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDP 155
Query: 385 VSLDYLRSLHEKHENW 400
DY + L ++ W
Sbjct: 156 TLEDYYKRLLRYYKPW 171
>sp|P34942|NDUAA_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
mitochondrial OS=Bos taurus GN=NDUFA10 PE=1 SV=1
Length = 343
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 215 KPAPKKRITFCVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVG---PDHFN 271
K +K V+GNI GK+ + IA E L L+ E +D G P F+
Sbjct: 39 KKMTEKSKLITVDGNICSGKSKLAKEIA-EKLGLKHFPEAGIHYVDSTTGDGKPLPVQFS 97
Query: 272 ---ILGAYYDAPER---YAYTFQNYVFVTRVMQERE------SSG-GIKPLRLMERSVFS 318
L +YD P+ +Y Q +++ +R++Q + S+G G+ ++ERS++S
Sbjct: 98 GNCSLEKFYDDPKSNDGNSYRLQAWLYASRLLQYADALEHLLSTGQGV----VLERSIYS 153
Query: 319 DRMVFVRAVHEAKYMNEMEISIYDS 343
D VF+ A++ ++ + + Y+
Sbjct: 154 D-FVFLEAMYRQGFIRKQCVDHYNQ 177
>sp|P37530|DGK_BACSU Deoxyguanosine kinase OS=Bacillus subtilis (strain 168) GN=dgk PE=1
SV=1
Length = 207
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 22/176 (12%)
Query: 225 CVEGNISVGKTTFLQRIANETLELRDLVEIVPEPIDKWQDVGPDHFNILGAYYDAPERYA 284
+EG I GKTT L + ++ + EIV + P L +YD + ++
Sbjct: 8 AIEGPIGAGKTT-LATMLSQKFGFPMINEIVED--------NP----YLDKFYDNIKEWS 54
Query: 285 YTFQNYVFVTRVMQERESSGGIKPLRLMERS--VFSDRMVFVRAVHEAKYMNEMEISIYD 342
+ + + R Q ++S +++ V +D ++ + + ++ ++ Y
Sbjct: 55 FQLEMFFLCHRYKQLEDTSD-----HFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYK 109
Query: 343 SWFDPVVSVLPGLIPDGFIYLRASPDTCHKRMMLRKRAEEGGVSLDYLRSLHEKHE 398
+ + LP P+ IY++AS T R+ R R E + YL L +E
Sbjct: 110 KIYHLLTDDLPK--PNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYE 163
>sp|Q8K9C3|TYSY_BUCAP Thymidylate synthase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=thyA PE=3 SV=1
Length = 264
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 315 SVFSDRMVFVRAVHEAKYMNEMEISIYDSWFD 346
S+ + + F+R KY+NE +ISI+D+W D
Sbjct: 54 SIIHELLWFLRGETNIKYLNENKISIWDNWAD 85
>sp|Q5JDJ7|BE_PYRKO 1,4-alpha-glucan branching enzyme TK1436 OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1436 PE=1 SV=1
Length = 675
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 94 VKAAGSESQKEKSEDKTSSSVKVSRRRGGGAGTAPGLVGNPDLLTIPGVGPRNLRKLVDN 153
VK E+ K + + K+S S ++ R+ A + G DLL+I G+GP+ +KL
Sbjct: 586 VKKKAVEASK-RGKRKSSKSKRLPRKVSKKAPSK----GPSDLLSIKGIGPKTFQKLKRA 640
Query: 154 GIGDVAELK 162
G+ + +LK
Sbjct: 641 GVETIEDLK 649
>sp|Q5LRY0|RL21_RUEPO 50S ribosomal protein L21 OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=rplU PE=3 SV=1
Length = 193
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 133 NPDLLTIPGVGPRNLRKLVDNGIGDVAELKQLYKDKF 169
+ DL I GVGP +KLV+ GIG A L L ++
Sbjct: 135 SDDLTKITGVGPAAAKKLVEAGIGSFAALAALSDEQI 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,149,238
Number of Sequences: 539616
Number of extensions: 9106579
Number of successful extensions: 26772
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 26682
Number of HSP's gapped (non-prelim): 61
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)