Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>009260
MLRRSILELSSRRRVPRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKPPESGSNFSP
IIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAEPVVFS
HSDEEPKTSISAVEQAMQSVEPHKDIRQPEALSKTPVEDQPHLQDKVELTPQDQTVAVKE
KDAAENSNKSIESREPSTSPPVSSEGSVEVESSESKSSKEKDENVQGTGILSQMSAASEK
DEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELN
NGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTE
EAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAEIAAS
IAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQ
KEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKPTREREKKRINLASV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009260
        (539 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2135267 - symbol:AT4G39690 "AT4G39690" species...   679  8.2e-67   1


>TAIR|locus:2135267 [details] [associations]
            symbol:AT4G39690 "AT4G39690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0031305 "integral to mitochondrial inner membrane"
            evidence=IEA] [GO:0006486 "protein glycosylation" evidence=RCA]
            InterPro:IPR019133 Pfam:PF09731 GO:GO:0005739 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0031305 OMA:SERIHSD
            eggNOG:NOG265967 EMBL:AF361810 EMBL:AY124859 EMBL:BT000714
            IPI:IPI00541278 RefSeq:NP_568066.1 UniGene:At.28712 IntAct:Q9ASV5
            STRING:Q9ASV5 PaxDb:Q9ASV5 PRIDE:Q9ASV5 EnsemblPlants:AT4G39690.1
            GeneID:830124 KEGG:ath:AT4G39690 TAIR:At4g39690
            HOGENOM:HOG000241064 InParanoid:Q9ASV5 PhylomeDB:Q9ASV5
            ProtClustDB:CLSN2689843 Genevestigator:Q9ASV5 Uniprot:Q9ASV5
        Length = 650

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 196/539 (36%), Positives = 257/539 (47%)

Query:    16 PRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKP-------------PESGSNFSPII 62
             PR + AQ   + S+R   ++ S KN  P   P GKP             P +  N S ++
Sbjct:    19 PRNLGAQRFHLSSSRN--ASTSGKNGLPGAKPVGKPDASKVDPPKVTPPPPTKGNSSKVV 76

Query:    63 FGATVVVGVGLIAYQNGYLDQYIDIEKEK-----HSSLDSSKFRXXXXXXXXXXXXAEPV 117
              G   + G  L+AYQ GYLDQY+  E++K     HS   + K                  
Sbjct:    77 IGGVAIAGAFLVAYQTGYLDQYLGKEQQKLSERIHSDALTEKLEEAHHLNVPSGVEDSTE 136

Query:   118 VFSHSDEEPKTSISAVEQAMQSVEPHKDIR-QPEALSKTPVEDQPHLQDKVELTPQDQTV 176
                  + +P+ + S   + +QS     DI  QPE  S    +   ++    E TPQ+  +
Sbjct:   137 KDGKVETQPQVTHSEASEGVQS-----DIELQPE--SDLSSDRFTYISSNQEETPQETVI 189

Query:   177 AVKEKDAAENSNKSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQGTGIL--SQM 234
                E +   ++++                                  N Q + +   S+ 
Sbjct:   190 DRAEINLPISASEDSGAKPDMPSEIISEAESVKLEAVPKPGDSPIIVNAQSSSVHRESET 249

Query:   235 SAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLR---------DKIDEGI 285
              +AS KD     P      ED  E E+    + P SLL  Y+L            I E I
Sbjct:   250 ESASPKD-----PAALKTPEDGIEREV----QLPGSLLKEYNLEGSDTESTGSSSIGEQI 300

Query:   286 DKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYE 345
              K TE F N  E L + Y+++DGK+VLDFL AIHAAE++QA LD + FAEE RALKEKYE
Sbjct:   301 TKETEAFPNSTEGLKDSYMTEDGKLVLDFLAAIHAAEKQQAHLDAQVFAEELRALKEKYE 360

Query:   346 KELRDSRARELMRTEEAAIXXXXXXXXXXXXXXTIKSXXXXXXXXXXXXXXXXXNEAESK 405
              ELRD RARELMR EEAAI               IK+                  EA+  
Sbjct:   361 NELRDLRARELMRIEEAAILDKELKRERTKAAAAIKAIQERMEDKLKAELEQKETEAQLA 420

Query:   406 LKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKXXXX 465
             L  A ELAKAE+ ++IA+EK AQIEKMAEA+L+I AL MAFYARSEEAR+S+  HK    
Sbjct:   421 LSKAEELAKAEMISTIAKEKAAQIEKMAEADLNIKALSMAFYARSEEARQSHSVHKLALG 480

Query:   466 XXXXXXXXSRGLPIQKEIDTLYTYLDGIEKXXXXXXXXXXXPEETRYHGTETLLQLNQK 524
                     S+GLP+QKEIDTL TYL+G  K           PEE R +GT+T+LQLNQK
Sbjct:   481 ALALDDTLSKGLPVQKEIDTLQTYLEGTHKDSILGLVLSSLPEEARSNGTDTVLQLNQK 539


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.126   0.331    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      539       428   0.00085  118 3  11 23  0.37    35
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  206 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.37u 0.10s 38.47t   Elapsed:  00:00:02
  Total cpu time:  38.37u 0.10s 38.47t   Elapsed:  00:00:02
  Start:  Mon May 20 15:20:29 2013   End:  Mon May 20 15:20:31 2013

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