BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009260
         (539 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q7SZL5|MTUS1_XENLA Microtubule-associated tumor suppressor 1 homolog OS=Xenopus laevis
            GN=mtus1 PE=1 SV=1
          Length = 1338

 Score = 34.7 bits (78), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 35/148 (23%)

Query: 312  LDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEK---ELRDSRARELMRTEEAAILEKE 368
            +D L   H A + QAE    +  E    LKE YEK   EL+D++ +E        ILE  
Sbjct: 1103 VDDLNTTHEAYRLQAET---SQIETIHTLKEDYEKSLTELKDAKDKE------NKILEDS 1153

Query: 369  LKRERA---KAAATIKSLQEKMEEKLRMELEQK-----------------ENEAESKLKN 408
             K ++A   K    +K + E ++EKL+ E EQ+                 E E ES LK 
Sbjct: 1154 FKEKQAEVEKKILELKDVNESLKEKLKYEEEQRKLTKEKSVQKNPQVMYLEQELES-LKA 1212

Query: 409  ALELAKAEIAASIAREKVAQIEKMAEAN 436
             LE+   ++      +K+ Q+EK+ E N
Sbjct: 1213 VLEIKNEKLHQQ--DKKLMQVEKLVETN 1238


>sp|P49140|SKI_CHICK Ski oncogene OS=Gallus gallus GN=SKI PE=3 SV=1
          Length = 750

 Score = 33.5 bits (75), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 28/181 (15%)

Query: 257 SENELSNSAESPASLLDAY--HLRDKIDEGID--KATEDFINVM--------EELNNGYL 304
           S  E++  ++S +S L+A   HLR  +D G+D  +A E F++ +        E+LN    
Sbjct: 545 SSYEVAAHSDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQ 604

Query: 305 SKDG-KVVLDFLQAIHAAEQRQAELDGRAFAEE---KRALKEKYEKELRDSRAR---ELM 357
           +K      L+FL+     + R+A    R   +E    RA  EK  KE  +SR R   EL 
Sbjct: 605 AKRSLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELE 664

Query: 358 RTEEAAILEK--ELKRERAKAAATIKSLQEKME------EKLRMELEQKENEAESKLKNA 409
           +  +  + +K  E  R RAK +A I+ LQ K++      E+LR +L   E EA   L+  
Sbjct: 665 QARQIRVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEADREQLRADL-MHEREAREHLEKV 723

Query: 410 L 410
           +
Sbjct: 724 V 724


>sp|A2QI68|FCJ1_ASPNC Formation of crista junctions protein 1 OS=Aspergillus niger
           (strain CBS 513.88 / FGSC A1513) GN=fcj1 PE=3 SV=1
          Length = 631

 Score = 33.1 bits (74), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 21/107 (19%)

Query: 350 DSRAREL------MRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAE 403
           D  AREL      MR  +AA   +E + ER K       L    +EK+R EL++ +  AE
Sbjct: 339 DESARELIRRFDEMRAADAAQYREEFEAEREK-------LAHAYQEKIRTELQRAQEVAE 391

Query: 404 SKLKN-----ALELAKA---EIAASIAREKVAQIEKMAEANLHINAL 442
            +LKN     A+EL +    E+   + RE+  ++ K+ E   +++ L
Sbjct: 392 QRLKNELVEQAIELNRKYLHEVKELVEREREGRLSKLNELTANVSEL 438


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.307    0.124    0.323 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,085,403
Number of Sequences: 539616
Number of extensions: 8131911
Number of successful extensions: 54705
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 2968
Number of HSP's that attempted gapping in prelim test: 42687
Number of HSP's gapped (non-prelim): 9633
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)