BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009263
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii
(strain 12J) GN=ftsH PE=3 SV=1
Length = 714
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 294/511 (57%), Gaps = 46/511 (9%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
++ Q TGV F+DVAGIDEA EEL E+V +LK+P+ + ++G K P GVLL G PG GKTL
Sbjct: 229 VYMQKETGVTFADVAGIDEAKEELSEIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTL 288
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKA+AGEAGVPF+ M+GS+FVE+ VGVG+AR+RDLFK+A+ P +IFIDE+DAL R
Sbjct: 289 LAKAVAGEAGVPFFSMSGSDFVEMFVGVGAARVRDLFKQAETKAPCIIFIDELDALGKTR 348
Query: 135 QGIFKDTTDHLYNA--ATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRP 192
NA +ERE TLNQLL+E+DGFD+ KGVI +AATNR ++LDPALLRP
Sbjct: 349 A----------LNAVGGNEEREQTLNQLLVEMDGFDSNKGVIIMAATNRPEILDPALLRP 398
Query: 193 GRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAAL 252
GRFDR + + P+ KGR +ILK+H V ++ VDL+ A PG+ GA LA LV EAAL
Sbjct: 399 GRFDRHVALDRPDLKGREQILKVHVKGVVLAPEVDLTKLAGRTPGFAGADLANLVNEAAL 458
Query: 253 VAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYEN 312
+A RK + + +D D+A+DR+ G +++ + + + A E G A+++
Sbjct: 459 LAARKSKQMVEMADFDEALDRIVGGLEKKNRVMNPKEKETIAFHEAGHAIVAE-----HR 513
Query: 313 AKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD 372
+ ++SI+PRG ++ Y+ +R +LL RL VLLGGR AE++I+G D
Sbjct: 514 PLADRVSKVSIIPRGVAALGYTQQTPTEDRYLL-KRSELLDRLDVLLGGRIAEQLIFG-D 571
Query: 373 TSRASVNYLADASWLARKILTIWNLENPM---VIHGEPPPWRKKVKFVGPRLDFEGSLYD 429
S + N L A+ +AR+++T + + + + P P L+
Sbjct: 572 VSTGAQNDLQRATDMARQMITQFGMSDQLGLATYENMPNP-----------------LFA 614
Query: 430 DYGLTEPPVNFNLDDD---IAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIG 486
GL + N + I +LL + R L L ++LL ++ +
Sbjct: 615 GTGLMQRERNEYSESTAQMIDAEVRKLLAEASHRVQATLEGQRTKLDALAQLLLEKEVVD 674
Query: 487 REEIDFILNN----YPPQTPISRLLEEENPG 513
R+++D L+ PP P++ + E G
Sbjct: 675 RQDLDMFLSAKVTPMPPPKPVANIEESTATG 705
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 291/492 (59%), Gaps = 39/492 (7%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
+TGV F DVAG+DEA ++ E+V +LK PE F +G K P GVLL GPPG GKTL+AKAI
Sbjct: 221 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAI 280
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIF 138
AGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+DEIDA+ +R GI
Sbjct: 281 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI- 339
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQLL E+DGF+ GVI +AATNR D+LD ALLRPGRFDR+
Sbjct: 340 --------GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQ 391
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ + P+ KGRT+ILK+HA K + V L A PG++GA LA L+ EAA++A R+
Sbjct: 392 VSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRA 451
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
SI S ++DD++DR+ G + + G + +S A EVG A+ L + +
Sbjct: 452 RTSISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAVCGTLTPGH-----DAV 505
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG-QDTSRAS 377
+++++PRGQ F DD + + + QL R+ LGGRAAEE+I+G + + +
Sbjct: 506 QKVTLIPRGQARGLTWFIPSDDPTLI--SKQQLFARIVGGLGGRAAEEIIFGDSEVTTGA 563
Query: 378 VNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDY---GLT 434
V L + LAR+++T + + + +GP + S D +
Sbjct: 564 VGDLQQITGLARQMVTTFGMSD-----------------IGPWSLMDSSAQSDVIMRMMA 606
Query: 435 EPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494
++ L +DI ++L Y ++ ++ + A+ K V+VLL ++ IG +E IL
Sbjct: 607 RNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAIL 666
Query: 495 NNYPPQTPISRL 506
+ + P +R+
Sbjct: 667 SEFTEIPPENRV 678
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 334 bits (857), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 178/409 (43%), Positives = 270/409 (66%), Gaps = 24/409 (5%)
Query: 4 QIKMCSFYYFA-------MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGI 56
QI+M F+ + S G T V F DVAG++EA EE+QELV +LK+P+ F K+G
Sbjct: 124 QIRMAGRGAFSFGKSRARLLSGGKTKVTFKDVAGVEEAKEEVQELVEFLKDPKKFQKLGG 183
Query: 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKV 116
+ P GVL+ GPPG GKTL+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F++A+
Sbjct: 184 RIPKGVLMVGPPGTGKTLLAKAIAGEADVPFFSISGSDFVEMFVGVGASRVRDMFEQARR 243
Query: 117 NKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFL 176
+ P ++FIDEIDA+ R D ERE TLN LL+E+DG ++ +GVI +
Sbjct: 244 HAPCIVFIDEIDAVGRARGTGLGGGHD--------EREQTLNALLVEMDGIESQEGVIVI 295
Query: 177 AATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLP 236
AATNR+D+LDPALLRPGRFDR++R+ P+ +GR +IL++HA K+K+S + DLS+ A+ P
Sbjct: 296 AATNRKDVLDPALLRPGRFDREVRVNLPDIRGREQILRVHAQKIKLSKNADLSALARGTP 355
Query: 237 GWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT 296
G++GA LA L+ EAAL+A +KG +++ D+++A D++ G +RR + + + + A
Sbjct: 356 GFSGAELANLINEAALIAAKKGKDNVDQPDLEEARDKVRWGKERRSLAMSEEERKTTAYH 415
Query: 297 EVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQ 356
E G A+++ LL EN + +++I+PRG L + D+ R+ ++L L
Sbjct: 416 EAGHAVLNVLL---EN--TDPIHKVTIIPRGPALGVTMMLPASDKYNA--RKKEVLDDLC 468
Query: 357 VLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPM-VIH 404
V +GGR AEEV G +S AS + + A+W ARK++ W + + ++H
Sbjct: 469 VAMGGRVAEEVFLGDISSGASGD-IRQATWYARKMVCEWGMSEKLGMVH 516
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/486 (39%), Positives = 293/486 (60%), Gaps = 41/486 (8%)
Query: 18 QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAK 77
+ TGV F+DVAG+DEA EE +E+V +LK PE F +G K P GVLL GPPG GKTL+AK
Sbjct: 165 EAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAK 224
Query: 78 AIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QG 136
AIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++FIDEIDA+ +R G
Sbjct: 225 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTG 284
Query: 137 IFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFD 196
I ERE TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFD
Sbjct: 285 I---------GGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFD 335
Query: 197 RKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVR 256
R++ + P+ KGR EIL +HA K+ S+ L AK PG++GA LA L+ EAA++ R
Sbjct: 336 RQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTAR 395
Query: 257 KGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVE 316
+ + I S++D ++DR+ G + + + + ++ + A EVG A+I LL+ ++ +
Sbjct: 396 RRKKQITISEIDASIDRVIAGMEGKAL-VDSKTKRLIAYHEVGHAIIGTLLKHHDPVQ-- 452
Query: 317 CCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG-QDTSR 375
++++VPRGQ F +D+S + R Q+L R+ LGGRAAEEV++G + +
Sbjct: 453 ---KVTLVPRGQAKGLTWFTPSEDQSLI--SRSQILARIMGALGGRAAEEVVFGLPEVTT 507
Query: 376 ASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTE 435
+ N L + +AR+++T + + N +GP L E D +
Sbjct: 508 GAGNDLQQVTSMARQMVTRFGMSN-----------------IGP-LSLESQNSDPFLGRT 549
Query: 436 PPVNFNLDDDIAWRTE----ELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEID 491
+ +DIA R + +++ + TV +++ + + K V +L+ ++ I +E
Sbjct: 550 MGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFR 609
Query: 492 FILNNY 497
I+ ++
Sbjct: 610 QIVGDF 615
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/489 (40%), Positives = 292/489 (59%), Gaps = 33/489 (6%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
+TGV F DVAG+DEA ++ E+V +LK PE F +G + P GVLL GPPG GKTL+AKAI
Sbjct: 214 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 273
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIF 138
AGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+DEIDA+ +R GI
Sbjct: 274 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI- 332
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQLL E+DGF+ GVI +AATNR D+LD ALLRPGRFDR+
Sbjct: 333 --------GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQ 384
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ + P+ KGRT+ILK+H+ K V L A PG++GA LA L+ EAA++A R+G
Sbjct: 385 VSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRG 444
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
+I S ++DD++DR+ G + + G + +S A EVG A+ L + +
Sbjct: 445 KTAISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAICGTLTPGH-----DAV 498
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTSRAS 377
+++++PRGQ F DD + + + QL R+ LGGRAAEEVI+G+ + + +
Sbjct: 499 QKVTLIPRGQARGLTWFIPSDDPTLI--SKQQLFARIVGGLGGRAAEEVIFGESEVTTGA 556
Query: 378 VNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPP 437
V+ L + LA++++T + + E PW + + D + ++E
Sbjct: 557 VSDLQQITGLAKQMVTTFGMS-------EIGPW--SLMDSSEQSDVIMRMMARNSMSEKL 607
Query: 438 VNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNY 497
N D D A +T L Y ++ +R + A+ K V++LL ++ + +E IL+ +
Sbjct: 608 AN---DIDTAVKT--LSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEF 662
Query: 498 PPQTPISRL 506
P +R+
Sbjct: 663 TEIPPENRV 671
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/375 (46%), Positives = 251/375 (66%), Gaps = 16/375 (4%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F+DVAG DEAV+EL E+ +L+NP+ F K+G + P G LL GPPG GKTL+A+A+AGE
Sbjct: 186 VTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGE 245
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P +IF+DEIDA+ +R
Sbjct: 246 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGH 305
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGFD+ G+I LAATNR D+LDPALLRPGRFDR+I +
Sbjct: 306 D--------EREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVD 357
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ GR +ILK+H + + VD+ + A+ PG+TGA LA LV EAAL+A R E I
Sbjct: 358 RPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQI 417
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
++M++A+DR+ GP+R+ + + + A E G A++ LL + + +++
Sbjct: 418 EMAEMEEAIDRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALL-----PEADPVHKVT 472
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
I+PRGQ L V L +E R QL+ +L +LGGRAAE V++ + T+ AS N +
Sbjct: 473 IIPRGQALG--VTMSLPEEDRFMMSRAQLMAQLSYMLGGRAAERVVFEEITTGAS-NDIE 529
Query: 383 DASWLARKILTIWNL 397
A+ +AR+++T + +
Sbjct: 530 RATKVARQMVTRYGM 544
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 191/478 (39%), Positives = 289/478 (60%), Gaps = 28/478 (5%)
Query: 18 QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAK 77
G+ V F DV G +EA+EEL+E+V +LK+P F+++G + P G+LL GPPG GKTL+A+
Sbjct: 153 SGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLAR 212
Query: 78 AIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGI 137
A+AGEA VPF+ ++GS+FVE+ VGVG+AR+RDLF +AK + P ++FIDEIDA+ R
Sbjct: 213 AVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAG 272
Query: 138 FKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDR 197
D ERE TLNQLL+E+DGFD+ +G+I +AATNR D+LDPALLRPGRFD+
Sbjct: 273 LGGGHD--------EREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDK 324
Query: 198 KIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRK 257
KI + P+ GR +IL+IH +++ V+L AK PG+ GA L LV EAAL+A R+
Sbjct: 325 KIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAARE 384
Query: 258 GHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVEC 317
G + I D ++A+DR+ GP R+ + + + A E G A++S ++ E
Sbjct: 385 GRDKITMKDFEEAIDRVIAGPARKSKLISPKEKRIIAYHEAGHAVVSTVV-----PNGEP 439
Query: 318 CDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRAS 377
RISI+PRG H +++ Y+ R +LL +L LLGGRAAEEV++G TS A+
Sbjct: 440 VHRISIIPRGYKALGYTLHLPEEDKYLVSRN-ELLDKLTALLGGRAAEEVVFGDVTSGAA 498
Query: 378 VNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPP 437
N + A+ +AR ++ + + P W K+ + V F G
Sbjct: 499 -NDIERATEIARNMVCQLGMSEEL----GPLAWGKEEQEV-----FLGKEITRLRNYSEE 548
Query: 438 VNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495
V +D+++ ++++ + Y R ++R++ L V++LL ++ I +E+ IL+
Sbjct: 549 VASKIDEEV----KKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS 602
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/378 (47%), Positives = 251/378 (66%), Gaps = 19/378 (5%)
Query: 18 QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAK 77
+ TGV F DVAGIDEA EELQE+V +LK PE F +G K P GVLL GPPG GKTL+AK
Sbjct: 203 EAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAK 262
Query: 78 AIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGI 137
AIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++FIDEIDA+ R++G+
Sbjct: 263 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVG-RQRGV 321
Query: 138 FKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDR 197
Y ERE TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFDR
Sbjct: 322 G-------YGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDR 374
Query: 198 KIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRK 257
++ + P+ +GR IL IHA K+ + V L++ A+ PG+TGA LA ++ EAA+ R+
Sbjct: 375 QVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARR 434
Query: 258 GHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT-EVGVAMISHLLRRYENAKVE 316
E+I ++++DA+DR+ G G L + R A EVG A+I L + +
Sbjct: 435 RKEAITMAEVNDAIDRVVAG--MEGTPLVDSKSKRLIAYHEVGHALIGTLCPGH-----D 487
Query: 317 CCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD-TSR 375
++++++PRGQ F +D+S M R Q++ R+ LLGGR AEEVI+G D +
Sbjct: 488 PVEKVTLIPRGQAQGLTWFTPDEDQSLM--TRNQMIARIAGLLGGRVAEEVIFGDDEVTT 545
Query: 376 ASVNYLADASWLARKILT 393
+ N + ++LAR+++T
Sbjct: 546 GAGNDIEKITYLARQMVT 563
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/485 (40%), Positives = 290/485 (59%), Gaps = 41/485 (8%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F DVAGIDE EEL E+V +LK+P+ + ++G + P GVLL GPPG GKTL+AKA+AGE
Sbjct: 154 VTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P ++FIDEIDA+ +R
Sbjct: 214 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGA------ 267
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
Y ERE TLNQLL+E+DGF +G+I +AATNR D+LDPALLRPGRFDR+I I
Sbjct: 268 --GYGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVID 325
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR I ++HA + VDL AK PG+TGA +A L+ EAAL+A R+ + I
Sbjct: 326 RPDLKGRLAIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKI 385
Query: 263 LSSDMDDAVDR-LTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRI 321
D++DA+DR L GP+++ + + + A E G A++ H+L ++ +I
Sbjct: 386 SMQDVEDAIDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHML-----PHMDPLHKI 440
Query: 322 SIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYL 381
+I+PRG+ + +F ++D + + ++L R+ + LGGRAAEE+ +G+ TS A +
Sbjct: 441 TIIPRGRAMGYTLFLPVEDRYNI--SKSEILDRMTMALGGRAAEEITFGEITSGAQDDIE 498
Query: 382 ADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNF- 440
W AR+++T W + + GP L + G D+ L
Sbjct: 499 RTTQW-ARRMVTEWGMSEKL----------------GP-LTY-GMKQDEVFLARDMTRLR 539
Query: 441 NLDDDIAWRTEELLRDM----YGRTVTLLRRHHAALLKTVKVLLNQKEI-GREEIDFILN 495
N +++A +E +R Y R + +L H AL K +VLL ++ + G+E D +
Sbjct: 540 NYSEEVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVLLEKETLEGKELQDLLEQ 599
Query: 496 NYPPQ 500
PP+
Sbjct: 600 LLPPR 604
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/475 (40%), Positives = 288/475 (60%), Gaps = 34/475 (7%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
VK +VAG+DE EE+ E++ YLK+P F K+G +PP G+L G PG GKTL+AKA+AGE
Sbjct: 160 VKLDNVAGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILFYGEPGVGKTLLAKALAGE 219
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
A VPF ++GS+FVE+ VGVG+AR+RD F+ A+ N P ++FIDEIDA+ R I
Sbjct: 220 AHVPFISVSGSDFVEMFVGVGAARMRDTFETARKNAPCIVFIDEIDAVGRSRGAINLGGN 279
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGFDT +G++ +AATNR D+LDPALLRPGRFDR+I I
Sbjct: 280 D--------EREQTLNQLLVEMDGFDTSEGILIIAATNRPDILDPALLRPGRFDRQIFIP 331
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR EILK+HA ++ VDL A+ PG+TGA L ++ EAAL+A RK + I
Sbjct: 332 KPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGFTGADLENILNEAALLAARKRKDLI 391
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
D+++A+DR+ +G +RRG+ + + + + A E G A++ ++ + ++S
Sbjct: 392 HMEDLEEAIDRVMMGLERRGMAISPKEKEKIAVHEAGHALMGLMM-----PDADPLHKVS 446
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD-TSRASVNYL 381
I+PRG L +DD+ ++++ + LL R+ +L+GGR AEEV YG+D + + N L
Sbjct: 447 IIPRGMALGVTTQLPIDDK-HIYD-KADLLSRIHILMGGRCAEEVFYGKDGITTGAENDL 504
Query: 382 ADASWLARKILTIWNLENPMVIHGEPPPWRKKVK-FVGPRLDFEGSLYDDYGLTEPPVNF 440
A+ LA +I+ W + + P R+ + F+G EGS P +
Sbjct: 505 QRATDLAYRIVATWGMSENV----GPISVRRNINPFLGGSTVTEGS---------PDLLK 551
Query: 441 NLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495
+D ++ ++LL Y T ++ + AL VK L+ ++ I +E IL+
Sbjct: 552 EIDKEV----QKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCKEFVEILS 602
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 286/489 (58%), Gaps = 45/489 (9%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
++ + F DVAG D A EEL+E++++LKNP+ F+ +G K P GVLL GPPG GKTL
Sbjct: 177 LYDKDEEDTTFDDVAGADSAKEELREIIKFLKNPKRFEGLGGKVPKGVLLVGPPGTGKTL 236
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEA PF+ ++GS+F+E+ VGVG++R+RD+F AK P++IFIDE+D++ +R
Sbjct: 237 LARAVAGEANAPFFSVSGSDFMEMFVGVGASRVRDMFSEAKETSPAIIFIDELDSIGRKR 296
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL ELDGF+ +GVI +AATNR D+LD AL RPGR
Sbjct: 297 GAGLGGGND--------EREQTLNQLLSELDGFEENEGVIVMAATNRPDILDSALTRPGR 348
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P + R EILKIHA + +SD VDL A++ PG++GA L L+ EAAL+A
Sbjct: 349 FDRQITVDLPTKQSRHEILKIHAREKPLSDDVDLEEIARSTPGFSGADLENLLNEAALLA 408
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R GH++I SD++ A D++ +G KR G+ L ++ + A E G A++ +L
Sbjct: 409 GRHGHDAIQYSDIEQARDKVMMGLKRDGMVLDDEEKKLLAYHEAGHAIVGAVL-----PN 463
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++IVPRG+ + V +L ++ R +L RL V++GGRAAEE+I+ TS
Sbjct: 464 ADPVHKVTIVPRGKAMG--VTQQLPEKDQYLYRHDYILDRLAVIMGGRAAEELIFDTATS 521
Query: 375 RASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLT 434
A N L +ARK++ W + + + K + SL +D G
Sbjct: 522 GAE-NDLKQVRKMARKMVLDWGMGD-------------QFKHI--------SLGEDQGNV 559
Query: 435 ----EPPVNFNLDDDIAWRTEELLR----DMYGRTVTLLRRHHAALLKTVKVLLNQKEIG 486
E DD A +E +R D + R V L HH A + +L+ Q+E+
Sbjct: 560 FLGDEIAKGREYSDDTAREVDEEIRRISEDAFQRAVDTLNEHHEAFDQLADMLIEQEEVS 619
Query: 487 REEIDFILN 495
+++ ++N
Sbjct: 620 GKDVLNLVN 628
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/475 (40%), Positives = 292/475 (61%), Gaps = 29/475 (6%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
ST V F DVAGI+EA +EL E+V +LKNP+ + ++G P GVLL GPPG GKTL+A+A+
Sbjct: 191 STRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAV 250
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK 139
AGEAGVPF+ M+GSEFVE++VGVG+AR+R+LF++AK P +IF+DE+DA+ RR+G
Sbjct: 251 AGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIG-RRRGSSI 309
Query: 140 DTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKI 199
+ H ERE TLNQLL+E+DGFD+ +GVI LAATNR D+LDPALLRPGRFDR++
Sbjct: 310 NVGGH------DEREQTLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRV 363
Query: 200 RIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGH 259
++ P+ GR +IL++H V + ++DLS A PG GA L LV EAAL+A R+G
Sbjct: 364 VVQRPDKVGRLKILQVHTRNVPLDPNLDLSEIAAATPGLVGADLRNLVNEAALLAARRGK 423
Query: 260 ESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCD 319
+ D DA++++T+G +R+ + + + + R A E G A++ LL + +
Sbjct: 424 NYVDREDFFDALEKITLGAERK-LLISEEDRRRVAYHESGHALLGLLL-----PEADPVH 477
Query: 320 RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVN 379
+++I+PRGQ L + + +D+ Y + R L R+ LGGRAAEE+++G T+ A N
Sbjct: 478 KVTIIPRGQALG-VTYQTPEDDRYNYTER-YLRSRITAALGGRAAEELVFGTVTTGAE-N 534
Query: 380 YLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVN 439
L + +AR+++T W + + + P ++ F+GP +T +
Sbjct: 535 DLKQVTEIARQMVTRWGMSKEVGLVYLSPDGQE--DFLGPN-----------PITSREYS 581
Query: 440 FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494
+L I T ++ + Y ++LL R L + LL ++ + ++I I+
Sbjct: 582 ESLATVIDRETRRIIDECYAEALSLLNRERQRLDNLAEALLREESLDEQQIREIV 636
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/492 (40%), Positives = 293/492 (59%), Gaps = 44/492 (8%)
Query: 14 AMFS-QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGK 72
A+F + TGV F+DVAG++EA EE QE+V +LK PE F +G K P GVLL GPPG GK
Sbjct: 160 ALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGK 219
Query: 73 TLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALAT 132
TL+AKAIAGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++FIDEIDA+
Sbjct: 220 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGR 279
Query: 133 RR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLR 191
+R G+ ERE TLNQLL E+DGF+ GVI +AATNR D+LD ALLR
Sbjct: 280 QRGTGV---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLR 330
Query: 192 PGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAA 251
PGRFDR++ + P+ +GR IL++HA KM V L + A+ PG++GA LA L+ EAA
Sbjct: 331 PGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAA 390
Query: 252 LVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT-EVGVAMISHLLRRY 310
++ R+ ++ S++D ++DR+ G + G L + R A EVG A+I LL +
Sbjct: 391 ILTARRRKSAMTMSEIDTSIDRVVAGLE--GTPLIDSKSKRLIAYHEVGHAIIGSLLEHH 448
Query: 311 ENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG 370
+ + +++++PRGQ F DD+S + R Q+L R+ LGGRAAEE+I+G
Sbjct: 449 DPVQ-----KVTLIPRGQARGLTWFTPSDDQSLI--SRSQILARIVGALGGRAAEEIIFG 501
Query: 371 Q-DTSRASVNYLADASWLARKILTIWNLE--NPMVI--HGEPPPWRKKVKFVGPRLDFEG 425
+ + + N L + +AR+++T + + P+ + G P F+G + G
Sbjct: 502 DAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDP-------FLGRGMG-GG 553
Query: 426 SLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEI 485
S Y D V N+D + E++ + Y +++ + + + V +L+ ++ I
Sbjct: 554 SEYSD------EVATNIDKQV----REIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETI 603
Query: 486 GREEIDFILNNY 497
E I+ Y
Sbjct: 604 EGNEFRHIVKEY 615
>sp|Q6MDI5|FTSH_PARUW ATP-dependent zinc metalloprotease FtsH OS=Protochlamydia
amoebophila (strain UWE25) GN=ftsH PE=3 SV=1
Length = 916
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/387 (43%), Positives = 256/387 (66%), Gaps = 16/387 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ ++G + F DVAG+DEA+EELQE+V +LKNP+ F +G K P GVL GPPG GKTL
Sbjct: 413 LLNKGDNKITFKDVAGVDEALEELQEIVEFLKNPQKFTSLGGKIPKGVLCIGPPGTGKTL 472
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKA+AGEA PF+ ++GS+FVE+ VGVG++RIRDLF++AK P +IF+DEIDA+ R
Sbjct: 473 IAKAVAGEADRPFFSISGSDFVEMFVGVGASRIRDLFEQAKKAAPCIIFMDEIDAVG-RH 531
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
+G+ ERE TLNQLL+E+DGFDT +GVI +AATNR D+LD ALLRPGR
Sbjct: 532 RGVG-------MGGGHDEREQTLNQLLVEMDGFDTNEGVILMAATNRPDVLDKALLRPGR 584
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR++ I P+ KGR +ILK+HA ++KM S+DL + A++ PG +GA LA ++ E+AL+A
Sbjct: 585 FDRRVIIGLPDIKGRYDILKVHARRIKMDPSIDLMAIARSTPGSSGADLANILNESALLA 644
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
RKG ++ + + +A D++ G +RR +E+ + A E G ++ +++
Sbjct: 645 ARKGRTAVTAQETIEARDKVLYGKERRSLEIDENEKRTTAYHESGHTVVGLIVK-----S 699
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ D+++I+PRG +L +F L ++ + + +L +L VL+GGR AEE+ G D S
Sbjct: 700 GDPVDKVTIIPRGMSLGATMF--LPKKNRVSYWKQELHDQLAVLMGGRVAEEIFVG-DVS 756
Query: 375 RASVNYLADASWLARKILTIWNLENPM 401
+ + A+ LAR ++ W + + +
Sbjct: 757 SGAQQDIERATQLARSMVCKWGMSDKL 783
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/483 (39%), Positives = 287/483 (59%), Gaps = 38/483 (7%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
+TGV F DVAG+DEA ++ E+V +LK PE F +G + P GVLL GPPG GKTL+AKAI
Sbjct: 208 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 267
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIF 138
AGEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++F+DEIDA+ +R GI
Sbjct: 268 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI- 326
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFDR+
Sbjct: 327 --------GGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ 378
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ + P+ +GRTEILK+H S K V L A PG++GA LA L+ EAA++A R+G
Sbjct: 379 VSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRG 438
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
+I S ++DD++DR+ G + + G + +S A EVG A+ L ++ +
Sbjct: 439 RTAISSKEIDDSIDRIVAGMEGTVMTDG-KSKSLVAYHEVGHAICGTLTPGHDPVQ---- 493
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTSRAS 377
+++++PRGQ F +DD + + R QL R+ LGGRAAEE+I+G+ + + +
Sbjct: 494 -KVTLIPRGQARGLTWFIPMDDPTLI--SRQQLFARIVGGLGGRAAEEIIFGEPEVTTGA 550
Query: 378 VNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDY---GLT 434
L + LA++++ + + + PW L G+ D +
Sbjct: 551 AGDLQQITGLAKQMVVTFGMSDI-------GPWS---------LMDSGAQSGDVIMRMMA 594
Query: 435 EPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494
++ L +DI + L + Y ++ +R + A+ K V+VLL ++ + +E IL
Sbjct: 595 RNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAIL 654
Query: 495 NNY 497
+ +
Sbjct: 655 SEF 657
>sp|C8W731|FTSH_ATOPD ATP-dependent zinc metalloprotease FtsH OS=Atopobium parvulum
(strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)
GN=ftsH PE=3 SV=1
Length = 644
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/381 (46%), Positives = 245/381 (64%), Gaps = 16/381 (4%)
Query: 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIA 80
TG+ F DVAG +EA E +QE+V +LK P+ + ++G + P G LL GPPG GKTL+AKA+A
Sbjct: 179 TGITFKDVAGQEEAKESMQEIVSFLKTPDKYKEIGARCPRGALLVGPPGTGKTLIAKAVA 238
Query: 81 GEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKD 140
GEAGVPF+Q+AGSEFVE+ VG G+A++RDLFK+A P +IFIDEIDA+ RR
Sbjct: 239 GEAGVPFFQIAGSEFVEMFVGRGAAKVRDLFKQANEKAPCIIFIDEIDAVGKRRDASLN- 297
Query: 141 TTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIR 200
+ ERE TLNQLL E+DGFD KG++ LAATNR + LD ALLRPGRFDR+I
Sbjct: 298 --------SNDEREQTLNQLLSEMDGFDNHKGIVVLAATNRPETLDKALLRPGRFDRRIP 349
Query: 201 IRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHE 260
+ P+ KGR +L+IHA+ VKM VDLS AK+ PG +GA LA ++ EAAL AVR G
Sbjct: 350 VELPDLKGREAVLQIHANDVKMEPGVDLSIVAKSTPGASGADLANIINEAALRAVRFGRR 409
Query: 261 SILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDR 320
+ + D+ ++VD + G K++ L + A E G A++ + + +A V +
Sbjct: 410 RVTTEDLTESVDVVIAGAKKKNSVLSEHEKDVVAYHETGHAIVGAIQKN--DAPVT---K 464
Query: 321 ISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNY 380
I+IVPR DDE Y+ + Q + + VL GGRAAEE+I+G+ T+ AS N
Sbjct: 465 ITIVPRTSGALGFTMQVEDDERYLMS-KSQAMDEIAVLCGGRAAEELIFGEMTNGAS-ND 522
Query: 381 LADASWLARKILTIWNLENPM 401
+ A+ +AR ++T + + + +
Sbjct: 523 IERATAIARAMVTQYGMSDKL 543
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/479 (40%), Positives = 281/479 (58%), Gaps = 39/479 (8%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V+FSDVAG DEAVEELQE+ +L NP + K+G K P G LL GPPG GKTL+A+A+AGE
Sbjct: 282 VRFSDVAGEDEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLVGPPGTGKTLLARAVAGE 341
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
A VPF+ ++GSEFVE+ VGVG++R+R+LF++AK PS+IFIDEIDA+ +R
Sbjct: 342 ANVPFFSISGSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFIDEIDAVGRQRGTGLGGGH 401
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGF+ V+ +AATNR D+LDPALLRPGRFDR+I +
Sbjct: 402 D--------EREQTLNQLLVEMDGFEKNDAVVLIAATNRVDVLDPALLRPGRFDRQIVVD 453
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR +IL++HA + + VDL AK G TGA L L+ EAAL+ R+ + I
Sbjct: 454 GPDVKGRVKILEVHAKNKPIGEDVDLERIAKLTSGMTGADLMNLMNEAALLTARRNKDKI 513
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
+++++++RL GP+R+ L + + A E G A++ H+L ENA + +I+
Sbjct: 514 GMDEVNESMERLMAGPERKTRVLNEKTRRTIAYHESGHALVGHML---ENA--DPVHKIT 568
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
IVPRG L + + DE R +L L V +GGR AEE+ G T+ AS N L
Sbjct: 569 IVPRGMALGYTM--SIPDEDKFLVSRSAMLDELAVFMGGRVAEEIFCGDITTGAS-NDLE 625
Query: 383 DASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTE---PP 437
A+ ARK++ + + + G+P + E L DYG T+ P
Sbjct: 626 RATKTARKMVVSYGMSEALGQQTFGQP--------------NHEVFLGRDYGNTQDYSPE 671
Query: 438 VNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNN 496
+D+++A L+++ + +L + KVLL ++ + EE +LNN
Sbjct: 672 TAQRIDEEVA----RLMKEAHDTAYEILSARQEQMHTMAKVLLERETVDGEECQALLNN 726
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 286/479 (59%), Gaps = 33/479 (6%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+F++ + F DVAGIDEA EL+E+V++LK+P F ++G + P GVLL G PG GKTL
Sbjct: 176 IFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTGKTL 235
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKA+AGEAGVPF+ M+GSEFVE+ VGVG+AR+RDLF +AK + P +IFIDE+DAL R
Sbjct: 236 LAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALGKAR 295
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
H ERE TLNQLL+E+DGFD GVI +AATNR ++LDPALLRPGR
Sbjct: 296 G--LNPIGGH------DEREQTLNQLLVEMDGFDPRSGVIIMAATNRPEILDPALLRPGR 347
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR + I P+ +GR IL++H +VK+ VDL A PG+ GA LA LV EAALVA
Sbjct: 348 FDRHVAIDKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGADLANLVNEAALVA 407
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R+ + + +D +A DR+ G +++ + + + A E G A+++ LL
Sbjct: 408 ARRDRDEVTMADFQEAADRIIGGLEKKNRAMNPKEKEIVAYHEAGHALVAMLL-----PN 462
Query: 315 VECCDRISIVPRGQTLSQLVF-HRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDT 373
V+ +++SI+PRG ++ L + +L E R +LL RLQVLLGGR +EE+I+G D
Sbjct: 463 VDPVNKVSIIPRG--IAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVSEEIIFG-DV 519
Query: 374 SRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGL 433
S + N L A+ +AR ++ + + + P + + PR S + D GL
Sbjct: 520 STGAQNDLQRATDIARSMVMEYGMSERL----GPLTYTRD-----PR-----SAHLDLGL 565
Query: 434 TEPPVNFN--LDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEI 490
+++ + +I ++ D + + L+R L K K+LL ++ I EE+
Sbjct: 566 GSRERDYSEMIAQEIDEEITRIVEDAHEKVRATLKRERGCLEKLAKILLEKESIDGEEL 624
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/482 (39%), Positives = 292/482 (60%), Gaps = 27/482 (5%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ S+ V F+DVAGIDEA +EL+E++ +LK+P+ F K+G + P GVL+ GPPG GKTL
Sbjct: 154 LLSEAQNKVTFADVAGIDEAKDELEEIIAFLKDPKKFQKLGGRIPKGVLMMGPPGTGKTL 213
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+AIAGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K + P +IFIDEIDA+ R
Sbjct: 214 LARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKHAPCIIFIDEIDAVGRHR 273
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF++ +GVI +AATNR D+LDPA+LRPGR
Sbjct: 274 GAGLGGGHD--------EREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPAILRPGR 325
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P+ +GR IL++H KV + VD+ A+ PG+ GA + LV EAAL+A
Sbjct: 326 FDRRIVVNRPDVRGREGILRVHTKKVPLGPDVDMEILARGTPGFVGADIENLVNEAALLA 385
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R+ + + D + A D++ +G +RR + + ++ + A E G A+++ LL ++ +
Sbjct: 386 ARQDKDVVSMVDFEMAKDKVLMGAERRSMVISDEEKRTTAYHEAGHALVAKLLEKFSDP- 444
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+++I+PRG L + +L E + R RL VL+GGR AEE+++GQ T+
Sbjct: 445 ---VHKVTIIPRGPALG--LTQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFGQFTT 499
Query: 375 RASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLT 434
A N + AS LAR+++T + + + VI ++ F+G DF S DY T
Sbjct: 500 GAG-NDIKQASNLARRMVTEFGMSD--VIGPISYGADEESVFLG--RDFT-SRRRDYSET 553
Query: 435 EPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494
+ +DD++ + D + LL + L + LL ++ + EE+D I+
Sbjct: 554 ---IANQIDDEV----RRFILDAHAEARQLLTDNREILERLATALLERETLDAEEVDAIV 606
Query: 495 NN 496
Sbjct: 607 GG 608
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 284/478 (59%), Gaps = 30/478 (6%)
Query: 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIA 80
T + F+DVAGID+A EL E+V +LKN E F +G K P GVLL GPPG GKTL+A+A+A
Sbjct: 164 TQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVA 223
Query: 81 GEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKD 140
GEAGVPF+ ++GSEFVE+ VGVG++R+RDLF++AK N P ++FIDEIDA+ +R
Sbjct: 224 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGG 283
Query: 141 TTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIR 200
D ERE TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFDR++
Sbjct: 284 GND--------EREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDAALLRPGRFDRQVT 335
Query: 201 IRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHE 260
+ P+ +GR EILK+HA +S VDL A+ PG+TGA LA L+ EAA++A R+
Sbjct: 336 VDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLT 395
Query: 261 SILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDR 320
I +++DAVDR+ GP+++ + + + A E G A++ LL Y + +
Sbjct: 396 EISMDEINDAVDRVLAGPEKKDRLMSERRKELVAYHEAGHALVGSLLPNY-----DPIQK 450
Query: 321 ISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTSRASVN 379
++I+PRGQ L + D+ R L + + V LGGR AEEV+YG+ + + + +
Sbjct: 451 VTIIPRGQA-GGLTWFMPSDDDMGLTTRAHLKNMMTVALGGRVAEEVVYGESEITTGAAS 509
Query: 380 YLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK-FVGPRLDFEGSLYDDYGLTEPPV 438
L + +AR ++T + + + + G R+ F+G + E ++
Sbjct: 510 DLQQVARIARNMVTRFGMSDRL---GNVALGRQYANIFLGREIAAERDFSEETAAL---- 562
Query: 439 NFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNN 496
+D+++ L+ + Y R L+R + A L + + L+ + I EE+ I++N
Sbjct: 563 ---IDEEV----RRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAIIDN 613
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 325 bits (832), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 172/383 (44%), Positives = 248/383 (64%), Gaps = 16/383 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
++++ TG+ F DVAG DEA E L E+V +L + + ++G K P G LL GPPG GKTL
Sbjct: 155 LYAENETGITFKDVAGQDEAKESLVEIVDFLHDTRKYVEIGAKLPKGALLVGPPGTGKTL 214
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKA+AGEA VPF+ M+GS+FVE+ VG+G+AR+RDLFK+A+ P ++FIDEIDA+ R
Sbjct: 215 LAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFIDEIDAIGKSR 274
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
G + ERE TLNQLL E+DGFD+ KGV+ LAATNR ++LD ALLRPGR
Sbjct: 275 DGAIQ---------GNDEREQTLNQLLTEMDGFDSSKGVVILAATNRPEVLDKALLRPGR 325
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P+ GR EILK+H+ VK+SD V L AK+ PG GA LA +V EAAL A
Sbjct: 326 FDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPGAVGADLANIVNEAALRA 385
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
V+ G + ++ D+D+AV+ + G ++R L + + A EVG A+++ LL
Sbjct: 386 VKHGRKFVIQEDLDEAVEVIIAGQEKRDRILSPKEKKIVAYHEVGHALVAALLNN----- 440
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +I+IVPR ++E Y+ + +++ ++ V+LGGRAAEEV++ T+
Sbjct: 441 TDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKE-EMIDQISVMLGGRAAEEVVFNSITT 499
Query: 375 RASVNYLADASWLARKILTIWNL 397
AS N + A+ AR ++TI+ +
Sbjct: 500 GAS-NDIERATQSARNMITIYGM 521
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 292/493 (59%), Gaps = 46/493 (9%)
Query: 14 AMFS-QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGK 72
A+F + TGV F+DVAG++EA EE QE+V +LK PE F +G K P GVLL GPPG GK
Sbjct: 160 ALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGK 219
Query: 73 TLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALAT 132
TL+AKAIAGEA VPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P ++FIDEIDA+
Sbjct: 220 TLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGR 279
Query: 133 RR-QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLR 191
+R G+ ERE TLNQLL E+DGF+ GVI +AATNR D+LD ALLR
Sbjct: 280 QRGTGV---------GGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLR 330
Query: 192 PGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAA 251
PGRFDR++ + P+ KGR IL++HA KM V L + A+ PG++GA LA L+ EAA
Sbjct: 331 PGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAA 390
Query: 252 LVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT-EVGVAMISHLLRRY 310
++ R+ ++ S++D ++DR+ G G L + R A EVG A+I LL +
Sbjct: 391 ILTARRRKNAMTMSEIDTSIDRVVAG--MEGTPLIDSKSKRLIAYHEVGHAIIGSLLEHH 448
Query: 311 ENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG 370
+ + +++++PRGQ F DD+S + R Q+L R+ LGGRAAEE+I+G
Sbjct: 449 DPVQ-----KVTLIPRGQARGLTWFTPSDDQSLI--SRSQILARIVGALGGRAAEEIIFG 501
Query: 371 Q-DTSRASVNYLADASWLARKILTIWNLE--NPMVIH---GEPPPWRKKVKFVGPRLDFE 424
+ + + N L + +AR+++T + + P+ + G+P F+G +
Sbjct: 502 DAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGGDP--------FLGRGMG-G 552
Query: 425 GSLYDDYGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKE 484
GS Y D V N+D + E++ + Y + ++ + + + V +L+ ++
Sbjct: 553 GSEYSD------EVATNIDKQV----REIVSECYAQAKHIIIDNRVVIDRLVDLLIEKET 602
Query: 485 IGREEIDFILNNY 497
I E I+ Y
Sbjct: 603 IEGNEFRDIVKEY 615
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 257/409 (62%), Gaps = 21/409 (5%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
M G V F DVAG+DEAVEEL+E V +LK+P F K+G + P G+LL GPPG GKTL
Sbjct: 151 MNRPGQARVTFKDVAGVDEAVEELKETVLFLKDPGRFSKIGARMPKGILLVGPPGTGKTL 210
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEA VPF+ ++GS+FVE+ VGVG+AR+RDLF +AK N P ++FIDEIDA+ R
Sbjct: 211 LARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFNQAKANAPCIVFIDEIDAVGRHR 270
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGFD +G++ +AATNR D+LDPALLRPGR
Sbjct: 271 GAGLGGGHD--------EREQTLNQLLVEMDGFDVRQGIVVMAATNRPDILDPALLRPGR 322
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FD+K+ + P+ +GR EILKIHA +++ VD+ A+ G+ GA L LV EAAL+A
Sbjct: 323 FDKKVVLDTPDVRGREEILKIHARNKPIAEDVDIRVLAQRTTGFVGADLENLVNEAALLA 382
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R G + I D ++A+DR+ GP R+ + + + A EVG A++S LL
Sbjct: 383 ARNGRDKIKMEDFEEAIDRVIAGPARKSRVISPREKRIVAYHEVGHAIVSSLL-----PN 437
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ RISI+PRG ++ Y+ ++ +LL ++ LLGGRAAEE+I+ Q+ +
Sbjct: 438 ADPVHRISIIPRGYRALGYTLQLPAEDRYLVTKQ-ELLDQITGLLGGRAAEELIF-QEVT 495
Query: 375 RASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVK--FVGPRL 421
+ + + A+ LAR+++ + + + + P W K + F+G L
Sbjct: 496 TGAASDIERATELARRMVCQFGMSDKL----GPLSWGKTEQEIFLGKEL 540
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 247/388 (63%), Gaps = 16/388 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
M + + FSDVAG DEA EE+QELV YLK P F K+G K P G+L+ GPPG GKTL
Sbjct: 141 MLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTL 200
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F+ ++ P +IFIDEIDA+ +R
Sbjct: 201 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQR 260
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQ+L+E+DGFD +G+I +AATNR D+LDPALLRPGR
Sbjct: 261 GAGLGGGHD--------EREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGR 312
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P+ +GR +I+++H KV + ++VD A+ PG++GA LA LV EAAL A
Sbjct: 313 FDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFA 372
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R + ++ SD + A D++T+G +RR + + + + A E G ++ L+ ++ A
Sbjct: 373 ARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAH 432
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG-QDT 373
+++I+PRG+ L F DD + + +L ++ L GGR AEE+IYG +
Sbjct: 433 -----KVTIIPRGRALGVTFFLPKDD--VLSINKNKLESQISTLYGGRLAEEIIYGVNNV 485
Query: 374 SRASVNYLADASWLARKILTIWNLENPM 401
S + N + A+ LAR ++T W +
Sbjct: 486 STGAHNDIKVATNLARNMVTQWGFSKKL 513
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 250/393 (63%), Gaps = 17/393 (4%)
Query: 6 KMCSF-YYFAMFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLL 64
+M SF A S+ V F DVA +E EELQE+V +LKNP+ F +MG K P GVLL
Sbjct: 142 QMMSFGKSRARLSENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLL 201
Query: 65 EGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFI 124
GPPG GKTL+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IFI
Sbjct: 202 VGPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFI 261
Query: 125 DEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL 184
DE+DA+ +R D ERE TLNQLL+E+DGF+ +G+I +AATNR D+
Sbjct: 262 DELDAVGRQRGAGLGGGHD--------EREQTLNQLLVEMDGFEPNEGIIVMAATNRPDV 313
Query: 185 LDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLA 244
LDPALLRPGRFDR++ + P+ KGR ILKIH ++D VD+ AK PG+TGA +
Sbjct: 314 LDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADME 373
Query: 245 QLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMIS 304
L EAA++AVR+ I D DDA+D++ GP ++ + + + A E G A++
Sbjct: 374 NLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKKSKVMSERERKLVAYHETGHALVG 433
Query: 305 HLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 364
LL + +ISIVPRG+ +D+++M + +LL ++ VLLGGRA+
Sbjct: 434 DLLEHADRTH-----KISIVPRGRAGGMRWALPKEDKNFM--SKQELLDQITVLLGGRAS 486
Query: 365 EEVIYGQDTSRASVNYLADASWLARKILTIWNL 397
E I+ +D S + N L A+ LAR ++T + +
Sbjct: 487 ES-IFLEDISTGAQNDLERATKLARAMVTEYGM 518
>sp|B4SCV5|FTSH_PELPB ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ftsH
PE=3 SV=1
Length = 662
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/387 (44%), Positives = 243/387 (62%), Gaps = 16/387 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
M S+ F DVAG+DEA+EELQE V +L NPE F K+G K P GVLL GPPG GKTL
Sbjct: 199 MVSEFEVKTTFKDVAGVDEAIEELQETVEFLTNPEKFQKIGGKIPKGVLLLGPPGTGKTL 258
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKAIAGEA VPF+ ++G++FVE+ VGVG+AR+RDLF++AK N P +IFIDEIDA+ R
Sbjct: 259 LAKAIAGEAKVPFFSISGADFVEMFVGVGAARVRDLFEQAKKNAPCIIFIDEIDAVGRSR 318
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF T + VI +AATNR D+LD ALLRPGR
Sbjct: 319 GAGLGGGHD--------EREQTLNQLLVEMDGFTTNENVILIAATNRPDVLDSALLRPGR 370
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I I P+ +GR ILKIH + VD++ AK+ PG++GA LA LV EAAL+A
Sbjct: 371 FDRQITIDKPDIRGREAILKIHTRNTPLDGDVDITVLAKSSPGFSGADLANLVNEAALLA 430
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R I + + + A D++ +GP+RR + + ++ + A E G H+L
Sbjct: 431 ARHEQVLITAVNFEQARDKILMGPERRSMFISDEQKKLTAYHEAG-----HVLVSIHTKG 485
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++I+PRG++L + L+D R LL + LGGR AEE+++ Q+ S
Sbjct: 486 SDPIHKVTIIPRGRSLGLTAYLPLEDRYT--HNREYLLAMITYALGGRVAEELVF-QECS 542
Query: 375 RASVNYLADASWLARKILTIWNLENPM 401
+ N + A+ +AR+++ W + +
Sbjct: 543 TGAANDIEKATDIARRMVRQWGMSESL 569
>sp|B3DV46|FTSH1_METI4 ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH1 PE=3 SV=1
Length = 636
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 201/482 (41%), Positives = 292/482 (60%), Gaps = 31/482 (6%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
STGV F+DVAG DEA ELQE+V +LKNP + +G K P GVLL GPPG GKTL+AKA+
Sbjct: 174 STGVTFADVAGCDEAKYELQEVVDFLKNPSRYRALGAKIPKGVLLVGPPGTGKTLLAKAV 233
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK 139
AGEA VPF+ ++GSEFVE+ VGVG+AR+RDLF +AK P ++FIDE+DA+ R++G+
Sbjct: 234 AGEAKVPFFSISGSEFVEMFVGVGAARVRDLFGQAKSKAPCIVFIDELDAIG-RQRGV-- 290
Query: 140 DTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKI 199
+ E E TLNQLL+E+DGFD +G+I LAATNR ++LD ALLRPGRFDR++
Sbjct: 291 -----RIQVGSDEHEQTLNQLLVEMDGFDPNEGIIVLAATNRPEILDRALLRPGRFDRQV 345
Query: 200 RIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGH 259
+ P+A GR IL++HA +S+++D A+ G++GA LA L+ EAAL+A R+
Sbjct: 346 VVDLPDANGREAILRVHARGKPLSENIDFKEIAQATMGFSGADLANLLNEAALLAARRKS 405
Query: 260 ESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCD 319
I D+ +A++++ GP+R+ L + + R A EVG A+++ + + E
Sbjct: 406 SRIEQVDLLEAMEKVIAGPERKSRVLSEKERERVAYHEVGHALVA-----FYSEHAEPVR 460
Query: 320 RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVN 379
+ISIVPRG++ + Y+ + +LL R+ V +GGRAAEE+IYG D + + N
Sbjct: 461 KISIVPRGKSALGYTLQLPTAQKYLLSKS-ELLDRICVAMGGRAAEELIYG-DITTGAEN 518
Query: 380 YLADASWLARKILTIWNL-ENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPV 438
L A+ +AR+++ ++ + E + H PP P L G L Y L E
Sbjct: 519 DLEVATTIARQMVCLYGMGEKSGLAHYVPPQ---------PLL---GGLDTSY-LKE--C 563
Query: 439 NFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYP 498
+ I E++L + Y R +++LR HH L + K LL ++ + EE IL N
Sbjct: 564 SDETARIIDLEIEKILEENYQRALSILRHHHVELKEVTKYLLQKETLNAEEFKSILENLK 623
Query: 499 PQ 500
Q
Sbjct: 624 EQ 625
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 279/475 (58%), Gaps = 33/475 (6%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F +VAG+DEA E+LQE+V +LK+P+ + K+G + P GVLL G PG GKTL+A+A+AGE
Sbjct: 160 VTFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGRIPKGVLLVGSPGTGKTLLARAVAGE 219
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IFIDEIDA+ R
Sbjct: 220 AGVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNAPCLIFIDEIDAVGRHRGAGMGGGH 279
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGF++ +GVI +AATNR D+LDPALLRPGRFDR++ +
Sbjct: 280 D--------EREQTLNQLLVEMDGFESSEGVIMIAATNRPDVLDPALLRPGRFDRRVIVN 331
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR +IL +H K + VD S A+ PG++GA L LV EAALVA R + +
Sbjct: 332 KPDLKGREQILAVHMRKTPLGPDVDASKIARGTPGFSGADLENLVNEAALVAARSDKKYL 391
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
D + A D++T+G +RR + + ++ + A E G ++ L ++ +++
Sbjct: 392 EMEDFEKAKDKVTMGAERRSMVISDEDKKVTAYHEAGHTLVGKKL-----VGLDPIHKVT 446
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
I+PRG L V L ++ + + + + + L GGRAAEE+I+ +D + + N +
Sbjct: 447 IIPRGMALG--VTQTLPEKESVSLSKSKAENMIAFLFGGRAAEELIF-KDITTGAGNDIE 503
Query: 383 DASWLARKILTIWNLE--NPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNF 440
A+ +AR+++ W + P+ P F+G + Y D E
Sbjct: 504 RATEIARRMVCEWGMSKLGPLAYETRDNPV-----FMGMGYGNKSKEYSDAKAQE----- 553
Query: 441 NLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495
I E++++ Y ++ +LR H AL + + LL + I E+D ++N
Sbjct: 554 -----IDTEVEKIIKHGYDISIQILRDHQDALERLTQALLEYETIDGHEVDMLVN 603
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 286/492 (58%), Gaps = 51/492 (10%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ S S V F DVAGIDEA EEL E+V +L+ P+ F K+G K P G LL GPPG GKTL
Sbjct: 146 LLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTL 205
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F++ K N P +IFIDEIDA+ R
Sbjct: 206 LAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVG-RH 264
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
+G+ + ERE TLNQLL+E+DGF+ +GVI +AATNR D+LDPALLRPGR
Sbjct: 265 RGVG-------FGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGR 317
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I I P+ GR +IL++H K+ + +V++S A+ PG++GA LA LV E+AL+A
Sbjct: 318 FDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIA 377
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R+ + + + D + A D++ +G +R+ + + + + A E G A+ S K
Sbjct: 378 ARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAVTS--------LK 429
Query: 315 VECCDRI---SIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ 371
+E D I +I+PRG+ L ++ RL + + R ++ L V +GGRAAE+VI+G
Sbjct: 430 LEASDPIHKATIIPRGRALGLVM--RLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGD 487
Query: 372 D-TSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDD 430
D T+ + + + A+ LAR ++T W + VGP L
Sbjct: 488 DKTTSGAASDIKQATHLARSMVTKWGMSEK----------------VGPLL--------- 522
Query: 431 YGLTEPPVN----FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIG 486
YG P N + + I ++L+ D +L + +L + K LL + +
Sbjct: 523 YGEQNDPNNHILSIEMSNLIDSEVKQLITDALKEATKILNENIESLHRIAKALLEYETLT 582
Query: 487 REEIDFILNNYP 498
+E+ +L P
Sbjct: 583 GQELSDLLEGKP 594
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 321 bits (823), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 284/498 (57%), Gaps = 62/498 (12%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
+TG+ F DVAG+DEA ++ +E+V +LK PE F +G K P GVLL GPPG GKTL+AKAI
Sbjct: 218 NTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAI 277
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALA-TRRQGIF 138
AGEAGVPF+ ++GSEF+E+ VGVG++R RDLF +AK N P ++FIDEIDA+ R GI
Sbjct: 278 AGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGI- 336
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQ+L E+DGF GVI +AATNR ++LD ALLRPGRFDR+
Sbjct: 337 --------GGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQ 388
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ + P+ +GR EILK+H+ K+ V LS A PG++GA LA L+ EAA++A R+G
Sbjct: 389 VSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRG 448
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
+ I +++DD++DR+ G + + + + ++ A EVG A+ + L ++ +
Sbjct: 449 KDKITLTEIDDSIDRIVAGMEGTKM-IDGKSKAIVAYHEVGHAICATLTEGHDPVQ---- 503
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTSRAS 377
++++VPRGQ F L E + QL R+ LGGRAAE+VI+G+ + + +
Sbjct: 504 -KVTLVPRGQARGLTWF--LPGEDPTLVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGA 560
Query: 378 VNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPP 437
L + +AR+++T++ + E PW LT+P
Sbjct: 561 AGDLQQVTEIARQMVTMFGMS-------EIGPW---------------------ALTDPA 592
Query: 438 VNFN---------------LDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQ 482
V N L +DI ++++ D Y +R + A+ K V VLL +
Sbjct: 593 VKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEK 652
Query: 483 KEIGREEIDFILNNYPPQ 500
+ + +E IL+ Y Q
Sbjct: 653 ETLTGDEFRAILSEYTDQ 670
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 177/383 (46%), Positives = 251/383 (65%), Gaps = 21/383 (5%)
Query: 18 QGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAK 77
+ TGVKF DVAGI+EA EELQE+V +LK PE F +G + P GVLL GPPG GKTL+AK
Sbjct: 191 EAKTGVKFDDVAGIEEAKEELQEVVTFLKQPERFTAVGARIPKGVLLVGPPGTGKTLLAK 250
Query: 78 AIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QG 136
AIAGEA VPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P +IFIDEIDA+ +R G
Sbjct: 251 AIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCLIFIDEIDAVGRQRGTG 310
Query: 137 IFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFD 196
I ERE TLNQLL E+DGF+ G+I +AATNR D+LD ALLRPGRFD
Sbjct: 311 I---------GGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFD 361
Query: 197 RKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVR 256
R++ + AP+ KGR EIL++H+ K+ SV L + A+ PG+TGA LA L+ EAA++ R
Sbjct: 362 RQVIVDAPDLKGRLEILQVHSRNKKVDPSVSLEAIARRTPGFTGADLANLLNEAAILTAR 421
Query: 257 KGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT-EVGVAMISHLLRRYENAKV 315
+ E+I ++DDAVDR+ G + G L + R A EVG ++ LL+ +
Sbjct: 422 RRKEAITILEIDDAVDRVVAGME--GTPLVDSKSKRLIAYHEVGHGLVGTLLKDH----- 474
Query: 316 ECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ-DTS 374
+ +++++PRGQ F +++ + R QL R+ L GRAAEE+++G+ + +
Sbjct: 475 DPVQKVTLIPRGQAQGLTWFTPNEEQGLI--SRSQLKARITSTLAGRAAEEIVFGKPEVT 532
Query: 375 RASVNYLADASWLARKILTIWNL 397
+ + L + +AR+++T + +
Sbjct: 533 TGAGDDLQKVTSMARQMVTKFGM 555
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 177/381 (46%), Positives = 247/381 (64%), Gaps = 19/381 (4%)
Query: 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIA 80
TGV F DVAGIDEA EELQE+V +LK PE F +G K P GVLL GPPG GKTL+AKAIA
Sbjct: 167 TGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIA 226
Query: 81 GEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKD 140
GEAGVPF+ ++GSEFVE+ VGVG++R+RDLFK+AK N P +IFIDEIDA+ +R
Sbjct: 227 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGG 286
Query: 141 TTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIR 200
D ERE TLNQLL E+DGF+ G+I +AATNR D+LD AL+RPGRFDR++
Sbjct: 287 GND--------EREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVM 338
Query: 201 IRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHE 260
+ AP+ GR EIL++HA K++ V + S A+ PG++GA LA L+ EAA++ R+
Sbjct: 339 VDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKS 398
Query: 261 SILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAAT-EVGVAMISHLLRRYENAKVECCD 319
+I ++DDAVDR+ G + G L + R A EVG A++ LL+ ++ +
Sbjct: 399 AITLLEIDDAVDRVVAGME--GTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQ----- 451
Query: 320 RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQD-TSRASV 378
+++++PRGQ F +E + QL+ R+ +GGRAAEE ++G D + +
Sbjct: 452 KVTLIPRGQAQGLTWFT--PNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAG 509
Query: 379 NYLADASWLARKILTIWNLEN 399
L + +AR+++T + + N
Sbjct: 510 GDLQQVTEMARQMVTRFGMSN 530
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/484 (38%), Positives = 289/484 (59%), Gaps = 32/484 (6%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
++++ VKF DVAG DE +EL E+V +LK+P F ++G + P GVLL GPPG GKTL
Sbjct: 150 LYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTL 209
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKA AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF+ AK N P +IFIDEIDA+ +R
Sbjct: 210 LAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQR 269
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF +G+I +AATNR D+LDPALLRPGR
Sbjct: 270 GAGLGGGHD--------EREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGR 321
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P+ GR +LK+HA + ++V+L S A PG++GA L L+ EAALVA
Sbjct: 322 FDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVA 381
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R+ + I + D+D+A DR+ GP ++ + + ++ A E G +I +L +
Sbjct: 382 ARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVL-----DE 436
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++IVPRGQ V L E F+ +P+LL ++ LLGGR AEE+I+G+ S
Sbjct: 437 ADMVHKVTIVPRGQAGGYAVM--LPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGE-VS 493
Query: 375 RASVNYLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDFEGSLYDDYG 432
+ N A+ +AR+++T + + + + G+ + F+G + E + D
Sbjct: 494 TGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQ---VFLGRDFNNEQNYSDQ-- 548
Query: 433 LTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDF 492
+ + +D +I + ++++ Y R +L + L + LL + + E+I
Sbjct: 549 -----IAYEIDQEI----QRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKH 599
Query: 493 ILNN 496
++++
Sbjct: 600 LIDH 603
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/480 (39%), Positives = 278/480 (57%), Gaps = 36/480 (7%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
M ++ KF DVAG DE +EL E+V +LK+P F +G + P GVLL GPPG GKTL
Sbjct: 155 MVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTL 214
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF+ AK N P +IFIDEIDA+ +R
Sbjct: 215 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQR 274
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF +G+I +AATNR D+LDPALLRPGR
Sbjct: 275 GAGLGGGHD--------EREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGR 326
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I++ P+ GR E+LK+HA ++D V+L + A PG++GA L L+ EAALVA
Sbjct: 327 FDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVA 386
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R H I +++A+DR+ GP ++ + + + A E G ++ + ENA
Sbjct: 387 ARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVG---VKLENA- 442
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++IVPRG V L E F +P+LL ++ LLGGR AEEV +G+ S
Sbjct: 443 -DMVHKVTIVPRGMAGGYAVM--LPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFGE-VS 498
Query: 375 RASVNYLADASWLARKILTIWNLE---NPM-VIHGEPPPWRKKVKFVGPRLDFEGSLYDD 430
+ N A+ +ARK++T + + PM I G F+G + E + D
Sbjct: 499 TGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQV-----FLGRDIQNEQNYSD- 552
Query: 431 YGLTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEI 490
+ +I + ++++ Y R +L + +L K LL+ + + E+I
Sbjct: 553 ----------AIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQI 602
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 245/388 (63%), Gaps = 16/388 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
M S+ F+DVAG DEA EE+ ELV YLK P F K+G K P G+L+ GPPG GKTL
Sbjct: 141 MLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTL 200
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+AKAIAGEA VPF+ ++GS+FVE+ VGVG++R+RD+F+ A+ + P +IFIDEIDA+ +R
Sbjct: 201 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQR 260
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQ+L+E+DGFD +GVI +AATNR D+LDPALLRPGR
Sbjct: 261 GAGLGGGHD--------EREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGR 312
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR++ + P+ +GR +ILK+H KV +S+ VD A+ PG++GA LA LV EAAL A
Sbjct: 313 FDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFA 372
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R + + + A D++ +G +RR + + + + A E G +I L+ ++ A
Sbjct: 373 ARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAH 432
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYG-QDT 373
+++I+PRGQ L F L + + R +L ++ L GGR AEE+IYG Q+
Sbjct: 433 -----KVTIIPRGQALGITFF--LPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNV 485
Query: 374 SRASVNYLADASWLARKILTIWNLENPM 401
S + N + A+ LAR ++T W + +
Sbjct: 486 STGAFNDIKVATNLARNMVTQWGFSDKL 513
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/504 (38%), Positives = 297/504 (58%), Gaps = 33/504 (6%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ S + V F DVAGI+EA EELQE+V++LK+P F ++G K P GVLL GPPG GKTL
Sbjct: 143 LMSDKAAKVTFQDVAGIEEAKEELQEVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTL 202
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+AIAGEA VPF+ ++GS+FVE+ VGVG+AR+RD+F++ K N P +IFIDEIDA+ R
Sbjct: 203 LARAIAGEANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHR 262
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF++ +GVI +AATNR D+LDPALLRPGR
Sbjct: 263 GAGLGGGHD--------EREQTLNQLLVEMDGFESTEGVIMVAATNRPDVLDPALLRPGR 314
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR++ + P+ GRT+ILK+H +KV +SDSVD A+ PG++GA LA LV EAAL+A
Sbjct: 315 FDRQVTVPNPDILGRTQILKVHMNKVPLSDSVDAEVIARATPGFSGADLANLVNEAALIA 374
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
+ + D ++A D++ +G RR + + + A E G A+++ L
Sbjct: 375 AQLDKRVVEMEDFENAKDKVMMGKPRRSAVISEKERKTTAYHEAGHAVVAMALD-----G 429
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++I+PRG+ L + L+D Y + + QL + +L+GGR AEE++ Q T+
Sbjct: 430 ADPVHKVTIIPRGRALGLTMQLPLEDR-YTYS-KVQLEQNIAILMGGRLAEELVLNQLTT 487
Query: 375 RASVNYLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDFEGSLYDDYG 432
A N + A+ LARK++ + + + + + +GE ++ F+G + S+ ++
Sbjct: 488 GAG-NDIQRATDLARKMICSYGMSDTLGPLTYGE----NEQEIFLGREITQHKSVSEETA 542
Query: 433 LTEPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDF 492
F++ D R +++L D L + LL ++ I +E+
Sbjct: 543 RRIDAEVFDIVDRNYKRAKQILTD-----------KMEVLHTMAQALLERETIDADEVIK 591
Query: 493 ILNNYPPQTPISRLLEEENPGTLP 516
++ P +T + L +++ P
Sbjct: 592 LMAGEPAETALKPLKKKDERANKP 615
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/389 (43%), Positives = 252/389 (64%), Gaps = 21/389 (5%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
S + F DVAG DEA EELQEL+ +LK+P F K+G K P GVLL G PG GKTL+AKA+
Sbjct: 150 SKKITFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAV 209
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR-QGIF 138
AGEA VPF+ +GSEFVE+ VGVG++R+RDLF + + P ++FIDEIDA+ R GI
Sbjct: 210 AGEANVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAVGRHRFAGI- 268
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQLL+E+DGFD+ +GVI +AATNR D+LDPALLRPGRFDR+
Sbjct: 269 --------GGGHDEREQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDRQ 320
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ I +P+ K R EIL +H+ K+++ + V+L+ A+ PG+ GA LA LV EAAL+A R
Sbjct: 321 VIILSPDLKDREEILGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEAALLAARNS 380
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
++ +M++A+DR+ GP+R+ + ++ ++ A E G +++ L +
Sbjct: 381 QNAVNMKNMEEAIDRILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFL-----PSADPV 435
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASV 378
++SI+PRG L + +L +E + +LL +L +L GGR AEE+++ + T+ A
Sbjct: 436 HKVSIIPRGPALGYTL--QLPEEDKYLTSKSELLDKLSILFGGRVAEELVFSEITTGAQ- 492
Query: 379 NYLADASWLARKILTIWNLEN---PMVIH 404
N ++ A+ +A +++T + + + PM +
Sbjct: 493 NDISKATGIAMRMVTEFGMSDKIGPMALQ 521
>sp|D2NQQ7|FTSH_ROTMD ATP-dependent zinc metalloprotease FtsH OS=Rothia mucilaginosa
(strain DY-18) GN=ftsH PE=3 SV=1
Length = 756
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/382 (45%), Positives = 248/382 (64%), Gaps = 16/382 (4%)
Query: 16 FSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLV 75
F++ V+FSDVAG+DEA+ EL+E+ +L PE F ++G K P GVLL GPPG GKTL+
Sbjct: 191 FTKDKPEVRFSDVAGVDEALAELEEVREFLAEPEKFTRLGAKIPKGVLLYGPPGTGKTLL 250
Query: 76 AKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQ 135
AKA+AGEAGVPFY ++GS+FVE+ VGVG++R+RDLFK AK + +++F+DEIDA+ RR
Sbjct: 251 AKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFKEAKSDPAAIVFVDEIDAVGRRRG 310
Query: 136 GIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRF 195
D ERE TLNQLL+E+DGFD VI +AATNR D+LDPALLRPGRF
Sbjct: 311 VGMGGGND--------EREQTLNQLLVEMDGFDGNSNVIVIAATNRPDVLDPALLRPGRF 362
Query: 196 DRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAV 255
DR+I + AP+ +GR IL++HA+ ++++VDL+ AK PG+TGA LA ++ EAAL+
Sbjct: 363 DRQIGVDAPDMQGREHILRVHAAGKPIANTVDLAQVAKRTPGFTGADLANVMNEAALLTA 422
Query: 256 RKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKV 315
R I +D+A+DR+ GP+R + + A E G A+++ LR
Sbjct: 423 RDNGNVIDDRAIDEAIDRVMAGPQRSSRIMNEHERKVTAYHEGGHALVAAALR-----NS 477
Query: 316 ECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSR 375
+I+I+PRG+ L + DD+ Y R +LL ++ +GGRAAEE+++ D S
Sbjct: 478 APVTKITILPRGRALGYTMVMPQDDK-YSTTRH-ELLDQMAYAMGGRAAEEIVF-HDPST 534
Query: 376 ASVNYLADASWLARKILTIWNL 397
+ N + A+ ARK++T + +
Sbjct: 535 GASNDIQKATDTARKMVTDYGM 556
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/375 (45%), Positives = 247/375 (65%), Gaps = 16/375 (4%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V+FSDVAG +E +EL E+V +LK+P+ F K+G + P GVLLEGPPG GKTL+AKA+AGE
Sbjct: 184 VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGE 243
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+R LF+ AK P++IFIDEIDA+ R++G+
Sbjct: 244 AGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVG-RQRGVG---- 298
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
ERE TLNQLLIE+DGF+ +G+I +AATNR D+LDPALLRPGRFDRK+ +
Sbjct: 299 ---LGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVG 355
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR ILK+HA +++ VDL A+ PG+ GA L ++ EAALVA R+ I
Sbjct: 356 RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSII 415
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
+SD+D+A DR+ GP ++ + + + A E G ++ +L NA+V +++
Sbjct: 416 DASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLS---NARV--VHKVT 470
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
IVPRG+ ++ L E M + + +L L+GGR AEE+I+ T+ AS N
Sbjct: 471 IVPRGRAGGYMI--ALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQTTGAS-NDFE 527
Query: 383 DASWLARKILTIWNL 397
A+ +AR ++T + +
Sbjct: 528 QATQMARAMVTEYGM 542
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/375 (45%), Positives = 247/375 (65%), Gaps = 16/375 (4%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V+FSDVAG +E +EL E+V +LK+P+ F K+G + P GVLLEGPPG GKTL+AKA+AGE
Sbjct: 184 VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGE 243
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+R LF+ AK P++IFIDEIDA+ R++G+
Sbjct: 244 AGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVG-RQRGVG---- 298
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
ERE TLNQLLIE+DGF+ +G+I +AATNR D+LDPALLRPGRFDRK+ +
Sbjct: 299 ---LGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVG 355
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ KGR ILK+HA +++ VDL A+ PG+ GA L ++ EAALVA R+ I
Sbjct: 356 RPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSII 415
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
+SD+D+A DR+ GP ++ + + + A E G ++ +L NA+V +++
Sbjct: 416 DASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLS---NARV--VHKVT 470
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
IVPRG+ ++ L E M + + +L L+GGR AEE+I+ T+ AS N
Sbjct: 471 IVPRGRAGGYMI--ALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQTTGAS-NDFE 527
Query: 383 DASWLARKILTIWNL 397
A+ +AR ++T + +
Sbjct: 528 QATQMARAMVTEYGM 542
>sp|Q83FV7|FTSH_TROWT ATP-dependent zinc metalloprotease FtsH OS=Tropheryma whipplei
(strain Twist) GN=ftsH PE=3 SV=1
Length = 666
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/383 (45%), Positives = 251/383 (65%), Gaps = 16/383 (4%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ S+ V+F+DVAG DEAVEELQE+ +L +P+ + K+G + P GVLL GPPG GKTL
Sbjct: 151 LVSKEMPKVRFTDVAGADEAVEELQEIKDFLSDPDKYRKLGARIPKGVLLFGPPGTGKTL 210
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N PS+IFIDEIDA+ RR
Sbjct: 211 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPSIIFIDEIDAVGRRR 270
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
F D ERE TLNQLL+E+DGFD +I +AATNR D+LD ALLRPGR
Sbjct: 271 GSGFGGGHD--------EREQTLNQLLVEMDGFDVKTNIILIAATNRSDVLDSALLRPGR 322
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR + I APN +GR +IL++HA +S SVDL A+ PG+TGA LA ++ EAAL+
Sbjct: 323 FDRHVAIDAPNLQGRLKILQVHARTKPVSKSVDLEVLARKTPGFTGADLANVLNEAALLT 382
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R + I +D+AVDR+ GP+RR + + + A E G A+ + +R
Sbjct: 383 ARSNAQIIDDRALDEAVDRVMAGPQRRSRVMTDHEKLVTAYHEAGHALTAAAMRYS---- 438
Query: 315 VECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
+ +++I+PR + L + + D + R +LL +L +GGRAAEE+++ T+
Sbjct: 439 -DPVTKVTILPRSRALGYTMVMPVQDRYSV--TRNELLDKLAYAMGGRAAEELVFHDPTT 495
Query: 375 RASVNYLADASWLARKILTIWNL 397
AS N + A+ +ARK++T + L
Sbjct: 496 GAS-NDIEKATSIARKMVTEFGL 517
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/386 (43%), Positives = 251/386 (65%), Gaps = 24/386 (6%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ ++ + F DVAG+DEA EELQE+V +LK+P F ++G K P G LL GPPG GKTL
Sbjct: 140 LLTENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTL 199
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RD+F++AK N P +IFIDEIDA+ R
Sbjct: 200 IARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHR 259
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF+ +G+I +AATNR D+LDPALLRPGR
Sbjct: 260 GAGLGGGND--------EREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGR 311
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR++ + P+ GR +I+++H V ++ VD+ + A+ PG++GA LA LV EAAL+A
Sbjct: 312 FDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMA 371
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
RK + D + A D++ +G +RR + + + + A E G A+++
Sbjct: 372 ARKNRRMVTMQDFEQAKDKVMMGAERRSMAMNEEEKKLTAYHEGGHAIVA--------LN 423
Query: 315 VECCD---RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ 371
V D + +IVPRG+ L +V + + Y + + Q+ RL +++GGR AEE+I+G+
Sbjct: 424 VPLADPVHKATIVPRGRALG-MVMQLPEGDRYSMKYQ-QMTSRLAIMMGGRVAEEIIFGK 481
Query: 372 D--TSRASVNYLADASWLARKILTIW 395
+ TS AS + A A+ LAR ++T W
Sbjct: 482 ENITSGASSDIKA-ATDLARNMVTRW 506
>sp|D3EZK2|FTSH3_CONWI ATP-dependent zinc metalloprotease FtsH 3 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH3 PE=3 SV=1
Length = 749
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 276/471 (58%), Gaps = 39/471 (8%)
Query: 19 GSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKA 78
G V F DVAGIDEA EL E+V +LKNP+ + ++G K P GVLL G PG GKTL+A+A
Sbjct: 234 GEAQVTFRDVAGIDEAEAELNEIVDFLKNPQKYQRLGGKIPKGVLLSGQPGTGKTLLARA 293
Query: 79 IAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIF 138
+AGEAGVPF+ M+ SEFVE++VGVG++R+RDLF++AK P++IFIDE+DA+
Sbjct: 294 VAGEAGVPFFSMSASEFVEMIVGVGASRVRDLFRQAKEAAPAIIFIDELDAIGR------ 347
Query: 139 KDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRK 198
ERE TLNQ+L E+DGF+ VI +AATNR ++LD ALLRPGRFDR+
Sbjct: 348 ARGGGRGSFGGNDEREQTLNQILTEMDGFEPTTAVIVIAATNRPEILDAALLRPGRFDRR 407
Query: 199 IRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258
+ + AP+ GR ILK+H V ++D VDL S A + PG GA LA LV EAAL+A R+G
Sbjct: 408 VTVAAPDRNGRLMILKVHTRSVPLADDVDLESIASSTPGMVGADLANLVNEAALLAARRG 467
Query: 259 HESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECC 318
H + +SD+ DA++++ +G +R+ + + + + R A E G A++ L A +
Sbjct: 468 HVKVTNSDVADALEKVVLGAERK-VMMSDDDRRRTAYHESGHAIVGML-----TAGADPV 521
Query: 319 DRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASV 378
++SI+PRGQ L + F D + Y ++ R L+ +++V LGGR AEE+++G T+ A
Sbjct: 522 RKVSIIPRGQALG-VTFSSPDADKYNYDER-YLVGKIKVALGGRVAEEIVFGDLTTGAES 579
Query: 379 NYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGP----RLDFEGSLYDDYGLT 434
+ + + +AR+++ W + + +GP + G L T
Sbjct: 580 D-IQQLTGIARQMVGRWGMS----------------RAIGPIAVLPSEGNGPLLPGVAET 622
Query: 435 EPPVNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEI 485
+D+++ ++ + LLR H A L V LL+Q+ +
Sbjct: 623 SESTQRLVDEEV----RRIVDSAHAEVTRLLREHRANLDSLVAGLLDQETL 669
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 244/362 (67%), Gaps = 18/362 (4%)
Query: 17 SQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVA 76
+ G V F DVAG+DEA EE+ E+V +LKNP+ F ++G K P GVLL GPPG GKTL+A
Sbjct: 202 AMGDHRVTFKDVAGLDEAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLA 261
Query: 77 KAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALA-TRRQ 135
KA+AGEAGVPF+ ++GS+FVE+ VGVG+AR+RDLF++AK P +IFIDEIDA+ +R +
Sbjct: 262 KAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGR 321
Query: 136 GIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRF 195
GI D ERE TLNQLL+E+DGF+T KGVI +AATNR D+LDPALLRPGRF
Sbjct: 322 GIMMGAND--------ERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRF 373
Query: 196 DRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAV 255
DR+I I P+ + R EI K+H + + D VDL A PG+ GA +A + EAAL+A
Sbjct: 374 DRQILIDKPDRRERLEIFKVHTRDLILGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAA 433
Query: 256 RKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKV 315
RKG E++ D + A+DR+ G +++ + + + A E G A++ L RY + V
Sbjct: 434 RKGKEAVEMEDFEQAIDRVIAGLEKKNKIISPEEREIVAYHEAGHAIVGWFL-RYTDPVV 492
Query: 316 ECCDRISIVPRGQTLSQLVFHR-LDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTS 374
++SIVPRG L+ L + + L +E Y++ + LL R+ + +GGR AEE+++G+ ++
Sbjct: 493 ----KVSIVPRG--LAALGYAQYLPEERYLYTKE-ALLDRMTMAIGGRVAEELVFGRIST 545
Query: 375 RA 376
A
Sbjct: 546 GA 547
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/480 (39%), Positives = 285/480 (59%), Gaps = 38/480 (7%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F+DVAG +EA EL ++V +LKNP + ++G + P GVLL GPPG GKTL+A+A+AGE
Sbjct: 248 VTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGE 307
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++ SEFVE+ VGVG++R+RDLF+RAK PS+IFIDE+DA+ +R
Sbjct: 308 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGN 367
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGF+ V+ +AATNR D+LDPALLRPGRFDR++ +
Sbjct: 368 D--------EREQTLNQLLVEMDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVG 419
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ +GR IL+IH + ++ VDL A PG++GA LA LV EAALVA R+G + +
Sbjct: 420 LPDKRGRAAILRIHTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVV 479
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
SD ++A+D++ +G R + + + + A E G A+++ Y + +IS
Sbjct: 480 DRSDFEEALDKMLLGTT-RSLLMSQEERRLVAYHEAGHAVVA-----YFTPGADPLRKIS 533
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
IVPRG+ L V + +E R QLL RL VLLGGRAAE++++ + T+ A N L
Sbjct: 534 IVPRGRALGVTV--QAPEEDRFNYTRNQLLGRLAVLLGGRAAEQLVFHEVTTGAQ-NDLK 590
Query: 383 DASWLARKILTIWNLE---NPMVIHGEPPPWRKKVKFVGPRLDFEG-SLYDDYGLTEPPV 438
+A+ LAR+++ +W + P+ + +G + F G + D+ + +
Sbjct: 591 EATQLARRMVGLWGMSEELGPIYLG------------LGEQHVFLGREIVQDHSIGTSTL 638
Query: 439 NFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYP 498
D + LL + R +LR H L + +L+ ++ +G E+I +L P
Sbjct: 639 -----DRADQAVQRLLNEAMERAERILREHREELDRLADLLIAEETVGPEKIREVLGEQP 693
>sp|D0LWB8|FTSH_HALO1 ATP-dependent zinc metalloprotease FtsH OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=ftsH PE=3 SV=1
Length = 682
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 251/377 (66%), Gaps = 15/377 (3%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F DVAG++EA +E++E++ +LK+P+ F ++G + P GVL+ GPPG GKTL+A+AIAGE
Sbjct: 189 VTFKDVAGVEEAKDEVEEIIAFLKDPKKFTRLGGRIPKGVLMMGPPGTGKTLLARAIAGE 248
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IFIDEIDA+ R
Sbjct: 249 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGH 308
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGF++ GVI +AATNR D+LDPALLRPGRFDR+I +
Sbjct: 309 D--------EREQTLNQLLVEMDGFESNDGVILIAATNRPDVLDPALLRPGRFDRRIIVP 360
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ +GRT IL +H KV +S V L A+ PG++GA L LV EAAL+A R+ + +
Sbjct: 361 RPDLRGRTGILGVHTRKVPLSTEVALEVIARGTPGFSGADLESLVNEAALIAARRDKDRV 420
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
D +DA D++ +G +RR + + ++ + A E G A+++ L+ A+ + ++S
Sbjct: 421 DMEDFEDAKDKVMMGAERRSMIISDKEKRTTAYHEAGHALVAKLV----GAETDPVHKVS 476
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
I+PRG+ L V L E + R L+++ +L+GGR AEE++ Q T+ A + +
Sbjct: 477 IIPRGRALG--VTQLLPTEDRLGFTREFALNKIAILMGGRLAEELVLKQKTTGAG-DDID 533
Query: 383 DASWLARKILTIWNLEN 399
A+ LAR+++T W + +
Sbjct: 534 KATDLARRMVTEWGMSD 550
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/522 (37%), Positives = 293/522 (56%), Gaps = 63/522 (12%)
Query: 1 MLIQIKMCSFYYFAMFSQGSTG--------------------VKFSDVAGIDEAVEELQE 40
LI I + +Y F +QG G V F+DVAG DE EELQE
Sbjct: 116 FLIVIFIIFWYIFMQQAQGGGGSKVMSFGKSRARMITDKDKRVTFNDVAGADEEKEELQE 175
Query: 41 LVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 100
+V +LK P+ F ++G + P GVLL GPPG GKTL+AKA+AGEAGVPF+ ++GS+FVE+ V
Sbjct: 176 IVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFV 235
Query: 101 GVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQL 160
GVG+AR+RDLF +AK N P ++FIDEIDA+ +R D ERE TLNQL
Sbjct: 236 GVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHD--------EREQTLNQL 287
Query: 161 LIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKV 220
L+E+DGF +G+I +AATNR D+LDPALLRPGRFDR I + P+ KGR EILKIH+
Sbjct: 288 LVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGREEILKIHSRNK 347
Query: 221 KMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGPKR 280
++ V L A+ PG+TGA L L+ EAAL+A R+G + I +++++A+ R+ GP++
Sbjct: 348 PLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEAITRVIAGPEK 407
Query: 281 RGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDD 340
R + + + A E G A+++ LL ++I+PRG+ + +D
Sbjct: 408 RSRIMSEKDKKLVAYHEAGHAVVAKLL-----PNTPPVHEVTIIPRGRAGGYTMLLPEED 462
Query: 341 ESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLADASWLARKILTIWNLE-- 398
+ YM + +++ + LLGGR AE ++ D S + N + A+ +ARK++T + +
Sbjct: 463 KYYM--SKSEMMDEIVHLLGGRVAESLVL-NDISTGAQNDIERATNIARKMVTEYGMSER 519
Query: 399 -NPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNLDDDIAWRTE----EL 453
PM + + F+G D G T N +++A + +
Sbjct: 520 LGPMTFG-----TKSEEVFLG----------RDLGRTR-----NYSEEVAAEIDREIKRI 559
Query: 454 LRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495
+ + Y R +LL+ + L + K L+ ++++ EE + + N
Sbjct: 560 IEEAYKRAESLLKENIDKLHRVAKALIEKEKLNGEEFEKVFN 601
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/487 (39%), Positives = 285/487 (58%), Gaps = 43/487 (8%)
Query: 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTL 74
+ S+ V F+DVAG DE EEL+E+V +LK+P+ F K+G + P GVL+ G PG GKTL
Sbjct: 144 LLSESHNKVTFADVAGADECKEELEEIVAFLKDPKKFTKLGGRIPKGVLMMGSPGTGKTL 203
Query: 75 VAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRR 134
+A+A+AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++ K N P +IFIDEIDA+ R
Sbjct: 204 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHR 263
Query: 135 QGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGR 194
D ERE TLNQLL+E+DGF++ GVI +AATNR D+LDPAL RPGR
Sbjct: 264 GAGLGGGHD--------EREQTLNQLLVEMDGFESNDGVILIAATNRPDVLDPALQRPGR 315
Query: 195 FDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254
FDR+I + P+ KGR +LK+H +V ++ VDL A+ PG TGA L LV E+AL+A
Sbjct: 316 FDRRIVVPRPDVKGRLGVLKVHTRRVPLAPEVDLEVIARGTPGMTGADLENLVNESALMA 375
Query: 255 VRKGHESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAK 314
R+ E + SD + A D++ +GP+RR + + + + A E G A+++ LL
Sbjct: 376 ARQNKERVDLSDFEAAKDKVFMGPERRSMIMTEKEKKNTAVHEAGHALLAKLL------- 428
Query: 315 VECCD---RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQ 371
CD +++I+PRGQ L V L E + + Q+L ++ + +GGR AEE+++ +
Sbjct: 429 -PGCDPLHKVTIIPRGQALG--VTWSLPTEDKVNGYKKQMLDQISMAMGGRIAEELMFNE 485
Query: 372 DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDY 431
+S A+ N + A+ AR ++ W + M P + K V DF S DY
Sbjct: 486 MSSGAA-NDIERATETARAMVCRWGMSEKM----GPLAFGKSDGEVFLGRDFNSS--KDY 538
Query: 432 GLTEPPVNFNLDDDIAWRTEELLRDM----YGRTVTLLRRHHAALLKTVKVLLNQKEIGR 487
+D A + + +R++ Y R LL + AL + L+ + +
Sbjct: 539 -----------SEDTARQIDAEVRNIVVGCYERGKNLLTENIEALRRVSDALVEYETLDA 587
Query: 488 EEIDFIL 494
E+++ +L
Sbjct: 588 EDVNILL 594
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 284/481 (59%), Gaps = 46/481 (9%)
Query: 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82
V F+DVAG +EA EL E+V +L+NP + +G + P G+LL GPPG GKTL+A+A+AGE
Sbjct: 200 VTFADVAGEEEAKAELSEVVDFLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGE 259
Query: 83 AGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTT 142
AGVPF+ ++ SEFVE+ VGVG++R+RDLF+RAK + PS++F+DE+DA+ +R
Sbjct: 260 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKASAPSIMFVDELDAVGRQRFAGLGGGN 319
Query: 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIR 202
D ERE TLNQLL+E+DGF+ + VI +AATNR D+LDPALLRPGRFDR++ +
Sbjct: 320 D--------EREQTLNQLLVEMDGFEPHQDVIVIAATNRPDVLDPALLRPGRFDRQVTVG 371
Query: 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESI 262
P+ +GR IL+IH + ++D +DL A PG++GA LA LV EAAL+A RK + +
Sbjct: 372 LPDRRGREAILRIHTRGIPVADDLDLEELAAATPGFSGADLANLVNEAALMAARKNKKIV 431
Query: 263 LSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRIS 322
D D+A+D++ +G +R I + + A E G A+ +H + + ++S
Sbjct: 432 ERIDFDEALDKIVLGTERAMI-MSEHDKRVVAYHEAGHAVAAHF-----SPGTDPLRKVS 485
Query: 323 IVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVNYLA 382
IVPRGQ+L V + +E R LL RL V++GGRAAE++++ + T+ A N L
Sbjct: 486 IVPRGQSLG--VTIQAPEEDRFNYSRAYLLARLTVMMGGRAAEKLVFNEMTTGAQ-NDLK 542
Query: 383 DASWLARKILTIWNLENPMVIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPPVNFNL 442
+A+ LAR+++ +W + + VGP G + G
Sbjct: 543 EATLLARRMVGLWGMSDE----------------VGPVYLGMGEQHVFLGR-----EIMQ 581
Query: 443 DDDIAWRTEE--------LLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494
D D+A T E LLR+ R LLR++ L + L+ ++ IG+E+I IL
Sbjct: 582 DRDVAEATLERADEAVQRLLREAMERAEQLLRKYRDKLDALAEALIAEETIGQEKITEIL 641
Query: 495 N 495
Sbjct: 642 G 642
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/481 (39%), Positives = 280/481 (58%), Gaps = 33/481 (6%)
Query: 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAI 79
S V F DVAG DE EL+E+V +LK P+ + MG + P G+LL GPPG GKTL+AKA+
Sbjct: 162 SQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGILLVGPPGTGKTLLAKAV 221
Query: 80 AGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFK 139
AGEAGVPF+ ++GS+FVE+ VGVG++R+RDLF++AK N P +IFIDEIDA+ +R
Sbjct: 222 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRQRGAGLG 281
Query: 140 DTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKI 199
D ERE TLNQLL+E+DGF +G+I +AATNR D+LD ALLRPGRFDR+I
Sbjct: 282 GGHD--------EREQTLNQLLVEMDGFGVNEGIILVAATNRPDILDKALLRPGRFDRQI 333
Query: 200 RIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGH 259
+ AP+AKGR E+LK+H ++SD VDL AK PG+ GA L L+ EAAL+AVR
Sbjct: 334 LVGAPDAKGREEVLKVHVRNKRLSDDVDLKVLAKRTPGFVGADLENLMNEAALLAVRANK 393
Query: 260 ESILSSDMDDAVDRLTVGPKRRGIELGNQGQSRRAATEVGVAMISHLLRRYENAKVECCD 319
+ I ++++A+ R+ GP+++ + + + A E G A++ + +
Sbjct: 394 KQIGMEELEEAITRVIAGPEKKSRVIHEEDRKITAYHEAGHAIVMKF-----SPHSDPVH 448
Query: 320 RISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAAEEVIYGQDTSRASVN 379
ISI+PRG + D SYM + +L + LLGGR AE++I G D S + N
Sbjct: 449 EISIIPRGMAGGYTMHLPERDTSYM--SKSKLKDEMVGLLGGRVAEQIIIG-DISTGASN 505
Query: 380 YLADASWLARKILTIWNLENPM--VIHGEPPPWRKKVKFVGPRLDFEGSLYDDYGLTEPP 437
+ S +ARK++ + + + + G F+G + + ++
Sbjct: 506 DIQRVSNIARKMVMEYGMSEKLGTITFGSD----HDEVFIGREIGKSKNYSEE------- 554
Query: 438 VNFNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNY 497
V F +D+++ + L+ + Y + +L H L KVLL+++++ EE + I+
Sbjct: 555 VAFEIDNEV----KALVDEAYKKAEKILTEHIDKLHAVAKVLLDKEKVTGEEFNAIVEGR 610
Query: 498 P 498
P
Sbjct: 611 P 611
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,346,239
Number of Sequences: 539616
Number of extensions: 8692122
Number of successful extensions: 33941
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 1162
Number of HSP's that attempted gapping in prelim test: 30075
Number of HSP's gapped (non-prelim): 3462
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)