Query 009263
Match_columns 539
No_of_seqs 411 out of 3382
Neff 8.4
Searched_HMMs 13730
Date Mon Mar 25 22:32:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009263.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009263hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 1.2E-48 8.6E-53 380.8 28.5 256 15-278 1-256 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 1.9E-47 1.4E-51 370.8 28.2 245 19-271 2-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 4.3E-44 3.2E-48 350.3 22.7 239 23-272 1-257 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.2E-41 8.4E-46 334.1 18.0 230 21-258 2-232 (265)
5 d2ce7a1 a.269.1.1 (A:411-603) 100.0 2E-38 1.4E-42 296.3 16.7 185 285-496 2-193 (193)
6 d2di4a1 a.269.1.1 (A:406-607) 100.0 4.5E-38 3.3E-42 296.1 14.7 191 285-503 2-199 (202)
7 d1w44a_ c.37.1.11 (A:) NTPase 99.9 6E-32 4.4E-36 267.7 -19.4 205 46-278 109-319 (321)
8 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 1.9E-24 1.4E-28 208.3 14.2 193 25-239 8-206 (246)
9 d1in4a2 c.37.1.20 (A:17-254) H 99.9 1.3E-22 9.3E-27 194.6 22.8 230 21-274 4-234 (238)
10 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 2.7E-22 2E-26 192.4 22.1 218 21-274 4-235 (239)
11 d1ofha_ c.37.1.20 (A:) HslU {H 99.9 5.6E-23 4.1E-27 204.8 13.0 178 27-216 15-213 (309)
12 d1sxja2 c.37.1.20 (A:295-547) 99.8 2.5E-19 1.8E-23 172.7 15.9 228 14-272 2-247 (253)
13 d1sxjc2 c.37.1.20 (C:12-238) R 99.8 5.2E-20 3.8E-24 174.8 10.2 216 16-271 4-225 (227)
14 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 2.6E-19 1.9E-23 170.5 15.0 209 14-269 12-228 (231)
15 d1njfa_ c.37.1.20 (A:) delta p 99.8 9.8E-19 7.1E-23 167.5 16.5 206 17-271 3-237 (239)
16 d1sxjd2 c.37.1.20 (D:26-262) R 99.7 8.4E-18 6.1E-22 160.1 15.7 214 16-271 2-235 (237)
17 d1sxjb2 c.37.1.20 (B:7-230) Re 99.7 5.1E-18 3.7E-22 160.6 12.7 206 16-272 5-223 (224)
18 d1fnna2 c.37.1.20 (A:1-276) CD 99.7 5.7E-17 4.2E-21 156.8 19.9 226 23-277 13-276 (276)
19 d1w5sa2 c.37.1.20 (A:7-293) CD 99.7 5.4E-17 4E-21 157.9 17.7 241 11-273 4-286 (287)
20 d1svma_ c.37.1.20 (A:) Papillo 99.7 1.3E-19 9.2E-24 183.2 -2.9 197 55-278 150-358 (362)
21 d1sxje2 c.37.1.20 (E:4-255) Re 99.7 5.4E-17 3.9E-21 155.9 14.7 191 16-248 1-232 (252)
22 d1r6bx2 c.37.1.20 (X:169-436) 99.6 1.3E-15 9.2E-20 146.5 15.0 219 24-274 16-265 (268)
23 d1l8qa2 c.37.1.20 (A:77-289) C 99.6 6.6E-15 4.8E-19 137.7 16.4 194 21-251 5-211 (213)
24 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 1.1E-14 7.9E-19 145.8 16.1 218 21-277 2-308 (333)
25 d1jbka_ c.37.1.20 (A:) ClpB, A 99.5 6.6E-15 4.8E-19 133.9 9.1 158 23-213 19-194 (195)
26 d1r6bx3 c.37.1.20 (X:437-751) 99.5 5.7E-14 4.1E-18 139.1 14.5 164 26-218 22-231 (315)
27 d1qvra2 c.37.1.20 (A:149-535) 99.5 3.5E-14 2.6E-18 143.7 10.7 201 23-256 19-246 (387)
28 d1qvra3 c.37.1.20 (A:536-850) 99.4 2.8E-13 2E-17 133.9 13.2 164 26-218 23-236 (315)
29 d1a5ta2 c.37.1.20 (A:1-207) de 99.4 1.9E-12 1.4E-16 120.1 15.2 154 57-245 22-203 (207)
30 d1um8a_ c.37.1.20 (A:) ClpX {H 99.4 1.1E-12 7.7E-17 132.0 12.7 179 26-214 17-279 (364)
31 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 9.3E-11 6.8E-15 120.5 15.8 70 27-98 15-88 (443)
32 d1gvnb_ c.37.1.21 (B:) Plasmid 99.1 2.3E-12 1.7E-16 124.1 -0.8 68 23-98 4-71 (273)
33 d1ny5a2 c.37.1.20 (A:138-384) 99.0 7.6E-10 5.5E-14 105.0 13.2 204 27-269 1-245 (247)
34 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.0 2.4E-08 1.7E-12 95.1 20.9 190 20-250 6-252 (283)
35 d2gnoa2 c.37.1.20 (A:11-208) g 99.0 1.3E-09 9.7E-14 99.7 10.9 117 58-206 14-140 (198)
36 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.5 4.2E-07 3.1E-11 80.5 12.3 26 61-86 2-27 (178)
37 d2a5yb3 c.37.1.20 (B:109-385) 98.2 1.5E-05 1.1E-09 75.9 15.9 49 26-83 20-68 (277)
38 d1kaga_ c.37.1.2 (A:) Shikimat 98.0 3.3E-06 2.4E-10 72.8 6.4 31 60-90 3-33 (169)
39 d1zp6a1 c.37.1.25 (A:6-181) Hy 98.0 6.1E-06 4.4E-10 72.3 7.9 39 59-97 4-42 (176)
40 d1lw7a2 c.37.1.1 (A:220-411) T 98.0 1.5E-06 1.1E-10 76.8 3.7 39 59-97 7-45 (192)
41 d1viaa_ c.37.1.2 (A:) Shikimat 97.9 9.1E-06 6.6E-10 70.8 7.1 31 60-90 1-31 (161)
42 d1qhxa_ c.37.1.3 (A:) Chloramp 97.8 9.4E-06 6.8E-10 70.9 5.4 39 59-97 3-41 (178)
43 d1rkba_ c.37.1.1 (A:) Adenylat 97.8 6.2E-06 4.5E-10 71.9 4.1 29 61-89 6-34 (173)
44 d1tf7a2 c.37.1.11 (A:256-497) 97.7 0.00013 9.7E-09 67.2 13.2 78 55-132 22-130 (242)
45 d1e6ca_ c.37.1.2 (A:) Shikimat 97.7 1.2E-05 8.9E-10 70.5 4.1 31 60-90 3-33 (170)
46 d2iyva1 c.37.1.2 (A:2-166) Shi 97.7 2.4E-05 1.7E-09 68.2 6.1 29 62-90 4-32 (165)
47 d2qy9a2 c.37.1.10 (A:285-495) 97.6 0.00024 1.8E-08 64.1 12.0 74 57-130 7-103 (211)
48 d1knqa_ c.37.1.17 (A:) Glucona 97.6 2.2E-05 1.6E-09 68.4 4.5 33 58-90 5-37 (171)
49 d2hyda1 c.37.1.12 (A:324-578) 97.5 0.00011 7.8E-09 68.7 9.1 28 56-83 41-68 (255)
50 d2bdta1 c.37.1.25 (A:1-176) Hy 97.5 2.3E-05 1.6E-09 68.1 4.1 29 60-88 3-31 (176)
51 d2pmka1 c.37.1.12 (A:467-707) 97.5 0.00012 8.9E-09 67.7 9.1 28 56-83 26-53 (241)
52 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.5 2.1E-05 1.5E-09 69.0 3.5 24 60-83 2-25 (189)
53 d1y63a_ c.37.1.1 (A:) Probable 97.5 3.2E-05 2.4E-09 67.4 4.7 29 58-86 4-32 (174)
54 d3d31a2 c.37.1.12 (A:1-229) Su 97.5 1.9E-05 1.4E-09 72.5 3.2 28 56-83 23-50 (229)
55 d1jj7a_ c.37.1.12 (A:) Peptide 97.5 0.00011 8.2E-09 68.5 8.6 28 56-83 37-64 (251)
56 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.5 3.7E-05 2.7E-09 68.7 4.6 33 57-89 4-36 (194)
57 d1bifa1 c.37.1.7 (A:37-249) 6- 97.5 0.00015 1.1E-08 65.0 8.8 38 59-96 2-42 (213)
58 d1okkd2 c.37.1.10 (D:97-303) G 97.5 0.00017 1.3E-08 65.0 9.0 38 58-95 5-45 (207)
59 d1tf7a1 c.37.1.11 (A:14-255) C 97.4 0.00024 1.8E-08 64.6 10.2 39 55-93 22-64 (242)
60 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.4 3.9E-05 2.8E-09 68.4 4.4 34 61-96 5-38 (190)
61 d2awna2 c.37.1.12 (A:4-235) Ma 97.4 2.3E-05 1.7E-09 72.2 2.7 28 56-83 23-50 (232)
62 d1p9ra_ c.37.1.11 (A:) Extrace 97.4 0.00016 1.2E-08 72.3 9.0 100 17-129 129-238 (401)
63 d1zaka1 c.37.1.1 (A:3-127,A:15 97.4 3E-05 2.2E-09 69.1 3.1 38 59-98 3-40 (189)
64 d1yj5a2 c.37.1.1 (A:351-522) 5 97.4 9.7E-05 7E-09 64.8 6.4 63 57-128 12-74 (172)
65 d3b60a1 c.37.1.12 (A:329-581) 97.4 0.00021 1.5E-08 66.7 9.0 28 56-83 38-65 (253)
66 d1g2912 c.37.1.12 (1:1-240) Ma 97.4 4E-05 2.9E-09 70.9 3.8 27 57-83 27-53 (240)
67 d1v43a3 c.37.1.12 (A:7-245) Hy 97.4 7.8E-05 5.6E-09 68.8 5.7 28 56-83 29-56 (239)
68 d1zina1 c.37.1.1 (A:1-125,A:16 97.4 5.3E-05 3.9E-09 66.7 4.5 35 61-97 2-36 (182)
69 d1l2ta_ c.37.1.12 (A:) MJ0796 97.4 3.4E-05 2.5E-09 70.9 3.1 28 56-83 28-55 (230)
70 d1xp8a1 c.37.1.11 (A:15-282) R 97.4 0.0002 1.4E-08 67.4 8.5 122 55-181 53-193 (268)
71 d1a1va1 c.37.1.14 (A:190-325) 97.3 0.00032 2.3E-08 58.6 8.9 35 60-94 9-43 (136)
72 d1u94a1 c.37.1.11 (A:6-268) Re 97.3 0.00016 1.2E-08 67.9 7.5 78 55-132 50-146 (263)
73 d1cr2a_ c.37.1.11 (A:) Gene 4 97.3 0.00019 1.4E-08 67.6 8.1 39 55-93 31-73 (277)
74 d1ly1a_ c.37.1.1 (A:) Polynucl 97.3 8.5E-05 6.2E-09 63.2 4.8 37 60-97 3-39 (152)
75 d1m8pa3 c.37.1.15 (A:391-573) 97.3 6.4E-05 4.7E-09 65.5 3.8 26 59-84 6-31 (183)
76 d3adka_ c.37.1.1 (A:) Adenylat 97.3 7.4E-05 5.4E-09 66.8 4.2 39 58-98 7-45 (194)
77 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.3 8.3E-05 6E-09 65.7 4.5 30 61-90 2-31 (182)
78 d1j8yf2 c.37.1.10 (F:87-297) G 97.3 0.00038 2.8E-08 62.8 9.0 73 57-129 10-105 (211)
79 d2cdna1 c.37.1.1 (A:1-181) Ade 97.3 8.6E-05 6.3E-09 65.4 4.5 30 61-90 2-31 (181)
80 d1teva_ c.37.1.1 (A:) UMP/CMP 97.2 8.8E-05 6.4E-09 66.1 4.4 36 59-96 1-36 (194)
81 d1x6va3 c.37.1.4 (A:34-228) Ad 97.2 2.4E-05 1.8E-09 69.6 0.4 28 59-86 19-46 (195)
82 d1oxxk2 c.37.1.12 (K:1-242) Gl 97.2 0.00021 1.5E-08 65.8 6.9 28 56-83 28-55 (242)
83 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.2 9.4E-05 6.9E-09 66.0 4.3 35 61-97 8-42 (189)
84 d1ukza_ c.37.1.1 (A:) Uridylat 97.2 8.8E-05 6.4E-09 66.3 4.1 34 61-96 10-43 (196)
85 d1akya1 c.37.1.1 (A:3-130,A:16 97.2 9.5E-05 6.9E-09 65.2 4.1 35 61-97 4-38 (180)
86 d3dhwc1 c.37.1.12 (C:1-240) Me 97.2 0.00012 9E-09 67.5 4.8 28 56-83 28-55 (240)
87 d1ls1a2 c.37.1.10 (A:89-295) G 97.2 0.00063 4.6E-08 61.3 9.5 38 59-96 10-50 (207)
88 d1ckea_ c.37.1.1 (A:) CMP kina 97.2 0.00011 7.8E-09 66.7 4.1 34 61-96 5-38 (225)
89 d1sgwa_ c.37.1.12 (A:) Putativ 97.2 0.00056 4.1E-08 61.3 8.8 28 56-83 24-51 (200)
90 d1vmaa2 c.37.1.10 (A:82-294) G 97.2 0.0015 1.1E-07 58.8 11.7 40 57-96 9-51 (213)
91 d1e4va1 c.37.1.1 (A:1-121,A:15 97.1 0.00013 9.8E-09 64.0 4.1 29 61-89 2-30 (179)
92 d1mo6a1 c.37.1.11 (A:1-269) Re 97.1 0.00027 2E-08 66.4 6.2 79 55-133 56-153 (269)
93 d1vpla_ c.37.1.12 (A:) Putativ 97.1 0.00047 3.4E-08 63.6 7.8 28 56-83 25-52 (238)
94 d2onka1 c.37.1.12 (A:1-240) Mo 97.1 5.6E-05 4.1E-09 69.7 1.1 23 61-83 26-48 (240)
95 d1q3ta_ c.37.1.1 (A:) CMP kina 97.1 0.00015 1.1E-08 65.8 4.1 28 62-89 6-33 (223)
96 d1g6oa_ c.37.1.11 (A:) Hexamer 97.0 0.00012 9E-09 70.9 3.1 70 59-128 166-245 (323)
97 d1ji0a_ c.37.1.12 (A:) Branche 97.0 0.00039 2.9E-08 64.2 6.2 27 57-83 30-56 (240)
98 d1yksa1 c.37.1.14 (A:185-324) 97.0 0.001 7.5E-08 54.8 8.3 36 57-92 5-44 (140)
99 d1g6ha_ c.37.1.12 (A:) MJ1267 97.0 0.00071 5.2E-08 63.0 7.8 27 57-83 28-54 (254)
100 d1r0wa_ c.37.1.12 (A:) Cystic 96.9 0.00076 5.6E-08 63.7 7.9 34 50-83 51-86 (281)
101 d1mv5a_ c.37.1.12 (A:) Multidr 96.9 0.00022 1.6E-08 66.1 3.9 28 56-83 25-52 (242)
102 d1khta_ c.37.1.1 (A:) Adenylat 96.8 0.00053 3.8E-08 59.7 5.2 25 60-84 2-26 (190)
103 d1szpa2 c.37.1.11 (A:145-395) 96.8 0.00064 4.6E-08 62.1 5.7 38 55-92 30-76 (251)
104 d1np6a_ c.37.1.10 (A:) Molybdo 96.7 0.00035 2.6E-08 60.1 3.4 31 61-91 4-37 (170)
105 d1m7ga_ c.37.1.4 (A:) Adenosin 96.7 0.00054 4E-08 61.8 4.7 41 58-98 23-67 (208)
106 d1w36d1 c.37.1.19 (D:2-360) Ex 96.7 0.0022 1.6E-07 62.6 9.4 21 60-80 164-184 (359)
107 d1nksa_ c.37.1.1 (A:) Adenylat 96.7 0.0023 1.7E-07 55.6 8.4 33 61-93 3-38 (194)
108 d1rz3a_ c.37.1.6 (A:) Hypothet 96.6 0.0014 1E-07 57.6 6.3 36 59-94 22-60 (198)
109 d1b0ua_ c.37.1.12 (A:) ATP-bin 96.6 0.0012 8.9E-08 61.4 6.0 28 56-83 25-52 (258)
110 d1nlfa_ c.37.1.11 (A:) Hexamer 96.5 0.0089 6.5E-07 55.4 11.7 40 56-95 26-78 (274)
111 d1l7vc_ c.37.1.12 (C:) ABC tra 96.4 0.0025 1.8E-07 58.2 7.2 27 56-82 22-48 (231)
112 d1wb9a2 c.37.1.12 (A:567-800) 96.4 0.008 5.8E-07 54.8 10.4 23 59-81 41-63 (234)
113 d2p6ra3 c.37.1.19 (A:1-202) He 96.3 0.0038 2.8E-07 55.5 7.6 34 59-92 40-76 (202)
114 d1gkya_ c.37.1.1 (A:) Guanylat 96.3 0.0015 1.1E-07 57.5 4.6 28 60-87 2-29 (186)
115 d1lvga_ c.37.1.1 (A:) Guanylat 96.2 0.0015 1.1E-07 57.9 4.4 27 61-87 2-28 (190)
116 d2fh5b1 c.37.1.8 (B:63-269) Si 96.2 0.012 8.8E-07 52.1 10.5 23 60-82 1-23 (207)
117 d1n0wa_ c.37.1.11 (A:) DNA rep 96.2 0.0013 9.7E-08 58.4 3.8 29 55-83 19-47 (242)
118 d2gj8a1 c.37.1.8 (A:216-376) P 96.2 0.0056 4E-07 51.8 7.7 22 61-82 3-24 (161)
119 d2fz4a1 c.37.1.19 (A:24-229) D 96.1 0.0058 4.3E-07 54.5 7.9 33 61-93 87-119 (206)
120 d1kgda_ c.37.1.1 (A:) Guanylat 96.1 0.0025 1.8E-07 55.7 5.2 24 60-83 4-27 (178)
121 d1htwa_ c.37.1.18 (A:) Hypothe 95.9 0.0035 2.5E-07 53.4 4.8 30 57-86 31-60 (158)
122 d1v5wa_ c.37.1.11 (A:) Meiotic 95.9 0.0022 1.6E-07 58.7 3.8 29 55-83 33-61 (258)
123 d1uj2a_ c.37.1.6 (A:) Uridine- 95.9 0.0033 2.4E-07 56.2 5.0 27 59-85 2-28 (213)
124 d1pzna2 c.37.1.11 (A:96-349) D 95.8 0.0017 1.2E-07 59.6 2.8 29 55-83 32-60 (254)
125 d1znwa1 c.37.1.1 (A:20-201) Gu 95.8 0.0029 2.1E-07 55.3 4.2 26 59-84 2-27 (182)
126 d1tuea_ c.37.1.20 (A:) Replica 95.8 0.002 1.5E-07 57.0 3.1 34 55-88 49-82 (205)
127 d1ewqa2 c.37.1.12 (A:542-765) 95.8 0.019 1.4E-06 51.8 9.8 21 61-81 37-57 (224)
128 d1xjca_ c.37.1.10 (A:) Molybdo 95.6 0.0061 4.4E-07 52.1 5.3 30 61-90 3-35 (165)
129 d1odfa_ c.37.1.6 (A:) Hypothet 95.5 0.012 8.9E-07 55.1 7.6 41 56-96 24-70 (286)
130 d1kkma_ c.91.1.2 (A:) HPr kina 95.4 0.0052 3.8E-07 53.3 4.3 31 58-89 13-43 (176)
131 d1sq5a_ c.37.1.6 (A:) Pantothe 95.4 0.0073 5.3E-07 57.4 5.7 41 56-96 77-122 (308)
132 d1r8sa_ c.37.1.8 (A:) ADP-ribo 95.3 0.021 1.5E-06 47.6 7.8 21 62-82 3-23 (160)
133 d2gjsa1 c.37.1.8 (A:91-258) Ra 95.3 0.0065 4.7E-07 52.1 4.4 21 62-82 4-24 (168)
134 d1gm5a3 c.37.1.19 (A:286-549) 95.3 0.076 5.5E-06 48.8 12.1 39 57-95 102-143 (264)
135 d1uf9a_ c.37.1.1 (A:) Dephosph 95.2 0.0072 5.2E-07 52.9 4.5 30 59-89 3-32 (191)
136 d1ctqa_ c.37.1.8 (A:) cH-p21 R 95.2 0.0039 2.8E-07 53.4 2.7 21 62-82 6-26 (166)
137 d1zd9a1 c.37.1.8 (A:18-181) AD 95.2 0.042 3.1E-06 46.3 9.4 23 61-83 4-26 (164)
138 d2i1qa2 c.37.1.11 (A:65-322) D 95.1 0.0042 3.1E-07 56.3 2.9 29 55-83 30-58 (258)
139 d1wf3a1 c.37.1.8 (A:3-180) GTP 95.1 0.021 1.5E-06 49.1 7.4 22 61-82 7-28 (178)
140 d2p67a1 c.37.1.10 (A:1-327) LA 95.1 0.042 3E-06 52.4 10.0 69 61-129 56-157 (327)
141 d2qm8a1 c.37.1.10 (A:5-327) Me 95.0 0.044 3.2E-06 52.2 9.9 69 61-129 53-154 (323)
142 d1knxa2 c.91.1.2 (A:133-309) H 94.8 0.007 5.1E-07 52.5 3.3 30 58-88 14-43 (177)
143 d1s2ma1 c.37.1.19 (A:46-251) P 94.8 0.14 9.9E-06 45.0 12.3 50 24-75 2-54 (206)
144 d2f7sa1 c.37.1.8 (A:5-190) Rab 94.8 0.049 3.5E-06 47.0 9.0 21 62-82 8-28 (186)
145 d1ko7a2 c.91.1.2 (A:130-298) H 94.8 0.009 6.6E-07 51.4 3.9 29 58-87 14-42 (169)
146 d1s96a_ c.37.1.1 (A:) Guanylat 94.8 0.011 8.2E-07 52.6 4.6 25 60-84 3-27 (205)
147 d1gkub1 c.37.1.16 (B:1-250) He 94.7 0.023 1.6E-06 51.5 6.8 35 59-93 58-95 (237)
148 d1mkya1 c.37.1.8 (A:2-172) Pro 94.7 0.071 5.2E-06 45.2 9.7 21 61-81 2-22 (171)
149 d2a5ja1 c.37.1.8 (A:9-181) Rab 94.7 0.01 7.6E-07 50.9 4.1 21 62-82 6-26 (173)
150 d1fzqa_ c.37.1.8 (A:) ADP-ribo 94.6 0.038 2.8E-06 47.1 7.8 21 61-81 18-38 (176)
151 d1wp9a1 c.37.1.19 (A:1-200) pu 94.6 0.13 9.3E-06 44.6 11.5 32 61-92 25-60 (200)
152 d1kaoa_ c.37.1.8 (A:) Rap2a {H 94.6 0.0068 5E-07 51.8 2.6 21 62-82 6-26 (167)
153 d2g9na1 c.37.1.19 (A:21-238) I 94.6 0.12 8.9E-06 45.9 11.3 52 23-76 12-66 (218)
154 d1h65a_ c.37.1.8 (A:) Chloropl 94.4 0.036 2.6E-06 51.0 7.4 42 34-82 14-55 (257)
155 d1z0fa1 c.37.1.8 (A:8-173) Rab 94.3 0.022 1.6E-06 48.4 5.2 21 62-82 7-27 (166)
156 d1u8za_ c.37.1.8 (A:) Ras-rela 94.3 0.01 7.3E-07 50.8 3.0 21 62-82 7-27 (168)
157 d1hv8a1 c.37.1.19 (A:3-210) Pu 94.2 0.14 1.1E-05 45.0 10.9 57 23-81 4-64 (208)
158 d2vp4a1 c.37.1.1 (A:12-208) De 94.2 0.01 7.4E-07 52.0 2.8 32 57-88 7-38 (197)
159 d2qtvb1 c.37.1.8 (B:24-189) SA 94.1 0.013 9.4E-07 49.0 3.3 21 62-82 3-23 (166)
160 d1yrba1 c.37.1.10 (A:1-244) AT 94.1 0.013 9.5E-07 52.9 3.5 29 62-90 3-33 (244)
161 d1nn5a_ c.37.1.1 (A:) Thymidyl 94.0 0.024 1.8E-06 50.4 5.2 31 61-91 5-38 (209)
162 g1f2t.1 c.37.1.12 (A:,B:) Rad5 93.9 0.011 7.7E-07 54.9 2.5 22 62-83 26-47 (292)
163 d1jjva_ c.37.1.1 (A:) Dephosph 93.9 0.02 1.5E-06 50.7 4.3 34 62-98 5-38 (205)
164 d1veca_ c.37.1.19 (A:) DEAD bo 93.8 0.16 1.2E-05 44.7 10.3 51 22-74 2-55 (206)
165 d1qdea_ c.37.1.19 (A:) Initiat 93.8 0.27 2E-05 43.3 11.8 55 20-76 7-64 (212)
166 d1upta_ c.37.1.8 (A:) ADP-ribo 93.8 0.017 1.2E-06 48.6 3.3 22 61-82 7-28 (169)
167 d2j0sa1 c.37.1.19 (A:22-243) P 93.7 0.35 2.6E-05 42.9 12.6 54 19-74 13-69 (222)
168 d1e0sa_ c.37.1.8 (A:) ADP-ribo 93.7 0.015 1.1E-06 49.8 3.0 23 60-82 13-35 (173)
169 d2eyqa3 c.37.1.19 (A:546-778) 93.7 0.19 1.4E-05 45.1 10.7 39 57-95 74-115 (233)
170 d1vhta_ c.37.1.1 (A:) Dephosph 93.6 0.02 1.5E-06 50.8 3.8 35 61-98 5-39 (208)
171 d1t6na_ c.37.1.19 (A:) Spliceo 93.5 0.32 2.3E-05 42.6 11.9 50 24-75 2-54 (207)
172 d1a7ja_ c.37.1.6 (A:) Phosphor 93.5 0.023 1.7E-06 53.1 3.9 36 61-96 6-44 (288)
173 d1gsia_ c.37.1.1 (A:) Thymidyl 93.4 0.035 2.5E-06 48.8 5.1 31 62-92 3-36 (208)
174 d1uaaa1 c.37.1.19 (A:2-307) DE 93.3 0.021 1.5E-06 53.4 3.5 18 59-76 14-31 (306)
175 d1u0ja_ c.37.1.20 (A:) Rep 40 93.3 0.03 2.2E-06 51.9 4.4 58 57-129 102-159 (267)
176 d1ksha_ c.37.1.8 (A:) ADP-ribo 93.2 0.021 1.5E-06 48.3 3.0 22 61-82 4-25 (165)
177 d1x3sa1 c.37.1.8 (A:2-178) Rab 93.2 0.046 3.3E-06 46.8 5.2 21 62-82 10-30 (177)
178 d1z2aa1 c.37.1.8 (A:8-171) Rab 93.0 0.026 1.9E-06 47.8 3.3 20 62-81 5-24 (164)
179 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 93.0 0.018 1.3E-06 49.3 2.1 21 61-81 15-35 (186)
180 d2bmfa2 c.37.1.14 (A:178-482) 92.9 0.049 3.5E-06 50.8 5.5 37 56-92 6-46 (305)
181 d1nrjb_ c.37.1.8 (B:) Signal r 92.9 0.026 1.9E-06 49.6 3.2 23 61-83 5-27 (209)
182 d2ocpa1 c.37.1.1 (A:37-277) De 92.8 0.039 2.8E-06 49.7 4.4 30 59-88 2-31 (241)
183 d3raba_ c.37.1.8 (A:) Rab3a {R 92.7 0.03 2.2E-06 47.7 3.3 21 62-82 8-28 (169)
184 d1zj6a1 c.37.1.8 (A:2-178) ADP 92.6 0.023 1.7E-06 48.4 2.4 22 61-82 17-38 (177)
185 d2atva1 c.37.1.8 (A:5-172) Ras 92.5 0.033 2.4E-06 47.3 3.4 21 62-82 5-25 (168)
186 d2f9la1 c.37.1.8 (A:8-182) Rab 92.4 0.034 2.5E-06 47.6 3.3 21 62-82 7-27 (175)
187 d2ew1a1 c.37.1.8 (A:4-174) Rab 92.4 0.03 2.2E-06 47.7 2.9 21 62-82 8-28 (171)
188 d4tmka_ c.37.1.1 (A:) Thymidyl 92.4 0.034 2.5E-06 49.2 3.4 23 61-83 4-26 (210)
189 d2cxxa1 c.37.1.8 (A:2-185) GTP 92.3 0.022 1.6E-06 49.0 1.9 22 61-82 2-23 (184)
190 d1deka_ c.37.1.1 (A:) Deoxynuc 92.3 0.03 2.2E-06 50.6 2.9 31 61-93 3-33 (241)
191 d1ky3a_ c.37.1.8 (A:) Rab-rela 92.2 0.039 2.8E-06 47.0 3.4 20 62-81 5-24 (175)
192 d1r2qa_ c.37.1.8 (A:) Rab5a {H 92.1 0.04 2.9E-06 46.8 3.3 21 62-82 9-29 (170)
193 d1z06a1 c.37.1.8 (A:32-196) Ra 92.1 0.041 3E-06 46.4 3.4 21 62-82 5-25 (165)
194 d1z08a1 c.37.1.8 (A:17-183) Ra 92.1 0.041 3E-06 46.6 3.4 20 62-81 6-25 (167)
195 d1tmka_ c.37.1.1 (A:) Thymidyl 92.0 0.069 5E-06 47.5 5.0 32 61-92 5-36 (214)
196 d2erya1 c.37.1.8 (A:10-180) r- 92.0 0.037 2.7E-06 47.1 3.0 21 62-82 8-28 (171)
197 d1q0ua_ c.37.1.19 (A:) Probabl 92.0 0.22 1.6E-05 43.6 8.4 50 24-75 2-54 (209)
198 d1pjra1 c.37.1.19 (A:1-318) DE 92.0 0.039 2.8E-06 52.0 3.4 23 59-81 24-47 (318)
199 d1g16a_ c.37.1.8 (A:) Rab-rela 91.9 0.038 2.7E-06 46.7 2.9 21 62-82 5-25 (166)
200 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 91.9 0.044 3.2E-06 47.2 3.4 20 62-81 5-24 (184)
201 d2erxa1 c.37.1.8 (A:6-176) di- 91.8 0.039 2.8E-06 46.9 2.8 21 62-82 5-25 (171)
202 d1t5la1 c.37.1.19 (A:2-414) Nu 91.7 0.61 4.4E-05 45.4 12.0 36 60-95 32-67 (413)
203 d1ihua1 c.37.1.10 (A:1-296) Ar 91.6 0.1 7.3E-06 48.3 5.9 27 57-83 6-32 (296)
204 d1xtqa1 c.37.1.8 (A:3-169) GTP 91.6 0.043 3.2E-06 46.4 2.9 22 61-82 6-27 (167)
205 d2g6ba1 c.37.1.8 (A:58-227) Ra 91.5 0.05 3.6E-06 46.2 3.3 21 62-82 9-29 (170)
206 d2fn4a1 c.37.1.8 (A:24-196) r- 91.5 0.045 3.3E-06 46.7 3.0 21 62-82 9-29 (173)
207 d2bmea1 c.37.1.8 (A:6-179) Rab 91.5 0.044 3.2E-06 46.7 2.9 21 62-82 8-28 (174)
208 d1svia_ c.37.1.8 (A:) Probable 91.5 0.034 2.5E-06 48.4 2.2 21 61-81 25-45 (195)
209 d1wmsa_ c.37.1.8 (A:) Rab9a {H 91.5 0.051 3.7E-06 46.3 3.4 21 62-82 9-29 (174)
210 d1c1ya_ c.37.1.8 (A:) Rap1A {H 91.4 0.052 3.8E-06 45.9 3.3 21 62-82 6-26 (167)
211 d1xpua3 c.37.1.11 (A:129-417) 91.4 0.37 2.7E-05 44.5 9.5 25 59-83 43-67 (289)
212 d1z0ja1 c.37.1.8 (A:2-168) Rab 91.4 0.054 4E-06 45.8 3.4 21 62-82 7-27 (167)
213 d1yzqa1 c.37.1.8 (A:14-177) Ra 91.3 0.048 3.5E-06 45.9 2.9 20 62-81 3-22 (164)
214 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 91.3 0.048 3.5E-06 46.6 2.9 22 62-83 5-26 (177)
215 d1u0la2 c.37.1.8 (A:69-293) Pr 91.3 0.048 3.5E-06 48.9 3.0 32 59-90 95-126 (225)
216 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 91.0 0.062 4.5E-06 45.5 3.3 21 62-82 6-26 (170)
217 d1p5zb_ c.37.1.1 (B:) Deoxycyt 90.9 0.03 2.2E-06 50.4 1.2 26 60-85 3-28 (241)
218 d1oywa2 c.37.1.19 (A:1-206) Re 90.8 0.15 1.1E-05 44.5 5.9 33 59-91 40-72 (206)
219 d1x1ra1 c.37.1.8 (A:10-178) Ra 90.8 0.067 4.8E-06 45.4 3.4 22 61-82 6-27 (169)
220 d2g3ya1 c.37.1.8 (A:73-244) GT 90.7 0.065 4.8E-06 45.6 3.2 20 62-81 6-25 (172)
221 d1e9ra_ c.37.1.11 (A:) Bacteri 90.6 0.073 5.3E-06 52.4 3.9 35 59-93 50-87 (433)
222 g1ii8.1 c.37.1.12 (A:,B:) Rad5 90.6 0.046 3.3E-06 51.4 2.2 22 61-82 25-46 (369)
223 d2bcgy1 c.37.1.8 (Y:3-196) GTP 90.5 0.063 4.6E-06 46.7 2.9 21 62-82 9-29 (194)
224 d1m7ba_ c.37.1.8 (A:) RhoE (RN 90.2 0.07 5.1E-06 45.8 2.9 21 62-82 5-25 (179)
225 d2fu5c1 c.37.1.8 (C:3-175) Rab 90.2 0.045 3.3E-06 46.7 1.6 20 62-81 9-28 (173)
226 d1moza_ c.37.1.8 (A:) ADP-ribo 90.1 0.059 4.3E-06 46.2 2.4 25 57-81 15-39 (182)
227 d2atxa1 c.37.1.8 (A:9-193) Rho 90.1 0.072 5.3E-06 45.9 3.0 21 62-82 12-32 (185)
228 d1mh1a_ c.37.1.8 (A:) Rac {Hum 90.0 0.076 5.5E-06 45.6 3.1 22 61-82 7-28 (183)
229 d1i2ma_ c.37.1.8 (A:) Ran {Hum 90.0 0.038 2.8E-06 47.1 1.0 21 62-82 6-26 (170)
230 d1egaa1 c.37.1.8 (A:4-182) GTP 90.0 0.069 5E-06 45.4 2.7 22 61-82 7-28 (179)
231 d1xzpa2 c.37.1.8 (A:212-371) T 89.8 0.031 2.3E-06 46.8 0.3 21 62-82 3-23 (160)
232 d1mkya2 c.37.1.8 (A:173-358) P 89.8 0.07 5.1E-06 45.7 2.7 22 61-82 10-31 (186)
233 d1wrba1 c.37.1.19 (A:164-401) 89.7 0.47 3.4E-05 42.5 8.5 16 59-74 58-73 (238)
234 d2ngra_ c.37.1.8 (A:) CDC42 {H 89.7 0.08 5.8E-06 45.8 2.9 22 62-83 6-27 (191)
235 d1qhla_ c.37.1.12 (A:) Cell di 89.2 0.029 2.1E-06 48.4 -0.4 23 62-84 27-49 (222)
236 d1lnza2 c.37.1.8 (A:158-342) O 89.1 0.076 5.5E-06 45.6 2.3 21 61-81 3-23 (185)
237 d2b8ta1 c.37.1.24 (A:11-149) T 89.0 0.19 1.4E-05 41.2 4.7 31 62-92 5-38 (139)
238 d1zcba2 c.37.1.8 (A:47-75,A:20 88.6 0.11 7.8E-06 45.0 3.0 18 62-79 5-22 (200)
239 d1udxa2 c.37.1.8 (A:157-336) O 88.5 0.087 6.4E-06 45.0 2.2 20 62-81 4-23 (180)
240 d1t9ha2 c.37.1.8 (A:68-298) Pr 88.4 0.037 2.7E-06 49.8 -0.3 28 59-86 97-124 (231)
241 d1puia_ c.37.1.8 (A:) Probable 88.1 0.092 6.7E-06 44.6 2.1 22 60-81 17-38 (188)
242 g1xew.1 c.37.1.12 (X:,Y:) Smc 87.9 0.11 7.9E-06 48.9 2.7 24 61-84 28-51 (329)
243 d1byia_ c.37.1.10 (A:) Dethiob 87.8 0.22 1.6E-05 43.4 4.6 33 60-92 2-38 (224)
244 d2bmja1 c.37.1.8 (A:66-240) Ce 87.3 0.17 1.2E-05 43.2 3.3 23 61-83 7-29 (175)
245 d1c4oa1 c.37.1.19 (A:2-409) Nu 87.1 1.8 0.00013 41.8 11.3 35 61-95 30-64 (408)
246 d1azta2 c.37.1.8 (A:35-65,A:20 86.8 0.15 1.1E-05 45.2 3.0 23 61-83 8-30 (221)
247 d1p6xa_ c.37.1.1 (A:) Thymidin 86.3 0.2 1.4E-05 47.6 3.5 30 61-90 8-39 (333)
248 d1c9ka_ c.37.1.11 (A:) Adenosy 85.7 0.74 5.4E-05 39.3 6.7 31 62-93 2-32 (180)
249 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 85.5 0.2 1.4E-05 42.9 2.9 23 61-83 4-26 (200)
250 d1ihua2 c.37.1.10 (A:308-586) 85.3 0.45 3.3E-05 43.3 5.5 35 59-93 20-57 (279)
251 d1z63a1 c.37.1.19 (A:432-661) 85.2 0.82 6E-05 40.3 7.2 41 59-99 31-76 (230)
252 d1e69a_ c.37.1.12 (A:) Smc hea 85.1 0.15 1.1E-05 47.4 1.9 24 61-84 26-49 (308)
253 d1wb1a4 c.37.1.8 (A:1-179) Elo 84.2 0.46 3.3E-05 40.3 4.7 22 61-82 7-28 (179)
254 d1nija1 c.37.1.10 (A:2-223) Hy 83.9 0.3 2.2E-05 43.4 3.4 23 61-83 5-27 (222)
255 d1w1wa_ c.37.1.12 (A:) Smc hea 83.7 0.29 2.1E-05 47.3 3.6 25 61-85 27-51 (427)
256 d1svsa1 c.37.1.8 (A:32-60,A:18 82.9 0.31 2.2E-05 41.5 3.0 21 62-82 5-25 (195)
257 d2jdid3 c.37.1.11 (D:82-357) C 82.6 3.2 0.00023 37.6 10.1 24 60-83 69-92 (276)
258 d1osna_ c.37.1.1 (A:) Thymidin 81.4 0.3 2.2E-05 46.2 2.5 24 62-85 8-31 (331)
259 d1tq4a_ c.37.1.8 (A:) Interfer 80.7 0.52 3.8E-05 45.8 4.0 24 58-81 55-78 (400)
260 d2dy1a2 c.37.1.8 (A:8-274) Elo 80.0 0.49 3.6E-05 43.2 3.4 24 60-83 3-26 (267)
261 d1z3ix2 c.37.1.19 (X:92-389) R 79.9 1.7 0.00013 39.8 7.4 44 57-100 77-130 (298)
262 d1cp2a_ c.37.1.10 (A:) Nitroge 79.5 0.74 5.4E-05 41.6 4.5 33 61-93 3-38 (269)
263 d2bv3a2 c.37.1.8 (A:7-282) Elo 79.4 0.52 3.8E-05 43.2 3.3 24 60-83 7-30 (276)
264 d1e2ka_ c.37.1.1 (A:) Thymidin 79.1 0.31 2.3E-05 46.0 1.7 24 62-85 7-30 (329)
265 d1j3ba1 c.91.1.1 (A:212-529) P 77.9 0.37 2.7E-05 45.0 1.7 18 60-77 15-32 (318)
266 d2olra1 c.91.1.1 (A:228-540) P 76.6 0.49 3.6E-05 44.0 2.2 18 60-77 15-32 (313)
267 d1fx0a3 c.37.1.11 (A:97-372) C 76.4 3.1 0.00023 37.7 7.8 24 59-82 67-90 (276)
268 d2c78a3 c.37.1.8 (A:9-212) Elo 76.0 0.64 4.6E-05 40.5 2.7 24 58-81 2-25 (204)
269 d1hyqa_ c.37.1.10 (A:) Cell di 75.7 1.4 0.0001 38.4 5.1 31 63-93 6-39 (232)
270 d1ii2a1 c.91.1.1 (A:201-523) P 73.8 0.65 4.7E-05 43.3 2.3 17 60-76 15-31 (323)
271 d1g8fa3 c.37.1.15 (A:390-511) 73.4 1 7.4E-05 35.6 3.0 33 61-93 8-45 (122)
272 d2jdia3 c.37.1.11 (A:95-379) C 73.1 11 0.00079 34.1 10.7 25 58-82 67-91 (285)
273 d1g3qa_ c.37.1.10 (A:) Cell di 72.5 2 0.00014 37.3 5.3 32 61-92 4-39 (237)
274 d2afhe1 c.37.1.10 (E:1-289) Ni 71.9 1.5 0.00011 39.8 4.5 33 61-93 4-39 (289)
275 d1bg2a_ c.37.1.9 (A:) Kinesin 71.7 0.8 5.8E-05 42.9 2.4 18 59-76 76-93 (323)
276 d1g7sa4 c.37.1.8 (A:1-227) Ini 70.7 1.3 9.4E-05 39.0 3.5 22 62-83 8-29 (227)
277 d1lkxa_ c.37.1.9 (A:) Myosin S 70.5 1.2 9.1E-05 46.1 3.8 26 58-83 85-110 (684)
278 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 70.3 1 7.5E-05 45.7 3.1 22 60-81 25-47 (623)
279 d1d0xa2 c.37.1.9 (A:2-33,A:80- 69.7 1.3 9.7E-05 46.1 3.8 26 58-83 124-149 (712)
280 d1br2a2 c.37.1.9 (A:80-789) My 68.5 1.5 0.00011 45.8 3.8 26 58-83 90-115 (710)
281 d2mysa2 c.37.1.9 (A:4-33,A:80- 67.5 1.4 0.0001 46.5 3.5 26 58-83 122-147 (794)
282 d1sdma_ c.37.1.9 (A:) Kinesin 67.2 1.4 0.0001 42.0 3.1 17 60-76 76-92 (364)
283 d1w7ja2 c.37.1.9 (A:63-792) My 66.9 1.6 0.00012 45.6 3.8 26 58-83 93-118 (730)
284 d1f9va_ c.37.1.9 (A:) Kinesin 65.8 2.3 0.00017 39.9 4.4 49 23-76 52-100 (342)
285 d2zfia1 c.37.1.9 (A:4-352) Kin 65.5 3.4 0.00025 38.8 5.6 17 60-76 88-104 (349)
286 d1htaa_ a.22.1.2 (A:) Archaeal 64.9 3.7 0.00027 28.4 4.3 34 240-273 34-67 (68)
287 d1kk8a2 c.37.1.9 (A:1-28,A:77- 64.8 1.6 0.00012 46.0 3.3 26 58-83 120-145 (789)
288 d1puja_ c.37.1.8 (A:) Probable 64.1 3.4 0.00025 37.2 5.1 57 24-82 78-135 (273)
289 d2akab1 c.37.1.8 (B:6-304) Dyn 63.8 2.4 0.00017 38.7 4.0 22 61-82 28-49 (299)
290 d2ncda_ c.37.1.9 (A:) Kinesin 62.8 1.9 0.00014 41.0 3.1 17 60-76 126-142 (368)
291 d1w36b1 c.37.1.19 (B:1-485) Ex 60.8 1.8 0.00013 42.1 2.5 26 57-82 14-40 (485)
292 d1ry6a_ c.37.1.9 (A:) Kinesin 60.3 2 0.00014 40.2 2.7 17 61-77 87-103 (330)
293 d1goja_ c.37.1.9 (A:) Kinesin 60.2 1.9 0.00014 40.7 2.6 46 22-76 47-97 (354)
294 d1h75a_ c.47.1.1 (A:) Glutared 59.5 12 0.00089 26.0 6.5 33 62-94 3-35 (76)
295 d1jwyb_ c.37.1.8 (B:) Dynamin 59.1 2.8 0.0002 38.4 3.5 26 57-83 23-48 (306)
296 d1ni3a1 c.37.1.8 (A:11-306) Yc 58.9 1.8 0.00013 39.7 2.1 31 62-92 13-48 (296)
297 g1f2t.1 c.37.1.12 (A:,B:) Rad5 58.7 6.3 0.00046 34.8 6.0 54 110-185 217-270 (292)
298 d1dgna_ a.77.1.3 (A:) Iceberg 57.8 3.7 0.00027 30.1 3.3 35 463-497 3-46 (89)
299 d1wxqa1 c.37.1.8 (A:1-319) GTP 57.6 2.4 0.00017 39.1 2.7 30 62-91 3-36 (319)
300 d1n0ua2 c.37.1.8 (A:3-343) Elo 57.5 2.4 0.00018 39.8 2.7 25 60-84 18-42 (341)
301 d1d2ea3 c.37.1.8 (A:55-250) El 56.0 3.4 0.00025 35.3 3.3 24 58-81 2-25 (196)
302 d1x88a1 c.37.1.9 (A:18-362) Ki 54.6 2.5 0.00018 39.7 2.3 18 60-77 82-99 (345)
303 d1v8ka_ c.37.1.9 (A:) Kinesin 54.1 2.5 0.00018 40.0 2.2 17 61-77 116-132 (362)
304 d1rifa_ c.37.1.23 (A:) DNA hel 54.0 5 0.00036 36.3 4.3 38 61-98 130-172 (282)
305 d2qn6a3 c.37.1.8 (A:2-206) Ini 53.7 4.1 0.00029 34.8 3.4 25 57-81 6-30 (205)
306 d1jnya3 c.37.1.8 (A:4-227) Elo 53.4 3.5 0.00026 35.9 3.0 27 58-84 2-28 (224)
307 d2axpa1 c.37.1.1 (A:2-165) Hyp 53.2 28 0.002 26.1 7.7 61 62-128 3-63 (164)
308 d1cy5a_ a.77.1.3 (A:) Apoptoti 52.9 12 0.0009 27.2 5.8 36 461-496 5-46 (93)
309 d1r7ha_ c.47.1.1 (A:) Glutared 52.4 19 0.0014 24.6 6.6 34 61-94 2-35 (74)
310 d1g5ta_ c.37.1.11 (A:) ATP:cor 51.4 29 0.0021 28.0 8.4 29 62-90 5-36 (157)
311 d1zunb3 c.37.1.8 (B:16-237) Su 48.9 5.9 0.00043 34.4 3.8 25 61-85 11-35 (222)
312 d1r0ka2 c.2.1.3 (A:3-126,A:265 48.4 11 0.00077 30.6 5.0 58 59-128 2-61 (150)
313 d1r5ba3 c.37.1.8 (A:215-459) E 46.7 4.5 0.00033 35.8 2.6 28 57-84 22-49 (245)
314 d1f5na2 c.37.1.8 (A:7-283) Int 46.6 3.3 0.00024 37.5 1.7 23 61-83 34-56 (277)
315 d1ku5a_ a.22.1.2 (A:) Archaeal 46.1 6.9 0.0005 26.8 3.0 32 241-272 34-65 (66)
316 d2o3la1 a.69.4.1 (A:14-95) Hyp 44.4 12 0.00088 26.9 4.2 41 455-495 3-43 (82)
317 d1hfca_ d.92.1.11 (A:) Fibrobl 44.1 4.3 0.00031 32.7 1.8 17 287-303 103-119 (157)
318 d1jala1 c.37.1.8 (A:1-278) Ych 41.9 7.4 0.00054 34.9 3.4 31 61-91 4-38 (278)
319 d1e69a_ c.37.1.12 (A:) Smc hea 41.2 23 0.0017 31.4 6.8 49 115-186 238-286 (308)
320 d1mmqa_ d.92.1.11 (A:) Matrily 41.1 4.4 0.00032 33.2 1.5 14 290-303 114-127 (166)
321 d1f60a3 c.37.1.8 (A:2-240) Elo 40.7 6.7 0.00048 34.5 2.7 25 60-84 7-31 (239)
322 d1i76a_ d.92.1.11 (A:) Neutrop 40.6 4.8 0.00035 32.8 1.6 14 290-303 112-125 (163)
323 d1hy7a_ d.92.1.11 (A:) Stromel 40.0 4.7 0.00034 32.9 1.5 13 290-302 113-125 (168)
324 d2qdyb1 b.34.4.4 (B:1-211) Iro 39.7 23 0.0017 30.2 6.1 32 468-499 73-104 (211)
325 d1xuca1 d.92.1.11 (A:104-272) 39.7 4.8 0.00035 32.9 1.5 15 289-303 112-126 (169)
326 d1kk1a3 c.37.1.8 (A:6-200) Ini 39.6 8.2 0.0006 32.3 3.1 22 60-81 6-27 (195)
327 g1ii8.1 c.37.1.12 (A:,B:) Rad5 39.5 20 0.0015 31.8 6.2 50 115-186 299-348 (369)
328 d2bykb1 a.22.1.3 (B:11-99) Chr 39.1 19 0.0014 26.0 4.8 35 242-276 34-68 (89)
329 d1rm8a_ d.92.1.11 (A:) Matrix 38.6 5.1 0.00037 32.5 1.5 15 289-303 116-130 (169)
330 d1qiba_ d.92.1.11 (A:) Gelatin 37.7 5.4 0.00039 32.2 1.5 14 290-303 109-122 (161)
331 d2huec1 a.22.1.1 (C:20-101) Hi 37.0 11 0.00077 27.2 2.8 35 240-274 40-74 (82)
332 d1y93a1 d.92.1.11 (A:106-263) 36.4 4.8 0.00035 32.4 0.9 15 289-303 106-120 (158)
333 d1n1ja_ a.22.1.3 (A:) Nuclear 36.3 20 0.0015 25.8 4.4 34 242-275 37-70 (87)
334 d1hv5a_ d.92.1.11 (A:) Stromel 36.2 4.9 0.00036 32.9 0.9 12 291-302 114-125 (162)
335 d1w1wa_ c.37.1.12 (A:) Smc hea 35.6 15 0.0011 34.3 4.6 49 117-187 353-401 (427)
336 d2ovxa1 d.92.1.11 (A:110-443) 34.4 5.7 0.00042 32.0 1.1 13 290-302 111-123 (159)
337 d1n1jb_ a.22.1.3 (B:) Nuclear 34.3 16 0.0011 25.7 3.4 33 242-274 34-66 (78)
338 d1tafb_ a.22.1.3 (B:) TAF(II)6 34.0 22 0.0016 24.5 4.0 33 240-272 37-69 (70)
339 d1fova_ c.47.1.1 (A:) Glutared 31.4 62 0.0046 22.2 6.6 34 61-94 2-35 (82)
340 d1xbta1 c.37.1.24 (A:18-150) T 31.0 25 0.0018 27.4 4.6 30 62-91 5-37 (133)
341 d1xx6a1 c.37.1.24 (A:2-142) Th 30.0 26 0.0019 27.7 4.5 69 62-131 10-93 (141)
342 d1mb3a_ c.23.1.1 (A:) Cell div 29.6 85 0.0062 23.3 7.7 18 202-219 104-121 (123)
343 d1khba1 c.91.1.1 (A:260-622) C 29.3 8.6 0.00063 35.7 1.4 18 62-79 19-38 (363)
344 d1w5fa1 c.32.1.1 (A:22-215) Ce 28.2 1.5E+02 0.011 24.3 9.7 64 66-132 96-160 (194)
345 d1nm3a1 c.47.1.1 (A:166-239) C 26.5 73 0.0053 21.3 6.1 35 60-94 5-39 (74)
346 d1is1a_ d.67.3.1 (A:) Ribosome 26.5 1.2E+02 0.009 24.6 8.6 56 440-495 103-158 (185)
347 d1tafa_ a.22.1.3 (A:) TAF(II)4 26.5 35 0.0026 23.3 4.0 59 211-273 5-65 (68)
348 d1kapp2 d.92.1.6 (P:1-246) Met 25.9 11 0.00083 32.9 1.6 13 291-303 171-183 (246)
349 d3crda_ a.77.1.3 (A:) Raidd CA 25.8 26 0.0019 25.7 3.6 35 462-496 6-47 (100)
350 d3ygsp_ a.77.1.3 (P:) Procaspa 25.1 39 0.0028 24.3 4.4 35 462-496 7-47 (97)
351 d2vapa1 c.32.1.1 (A:23-231) Ce 25.0 1.8E+02 0.013 24.1 10.3 65 66-133 111-176 (209)
352 d1g9ka2 d.92.1.6 (A:3-244) Met 24.8 12 0.00089 32.5 1.6 13 290-302 161-173 (242)
353 d1jfib_ a.22.1.3 (B:) Negative 24.6 40 0.0029 26.3 4.6 35 242-276 38-72 (135)
354 d1kjwa2 c.37.1.1 (A:526-724) G 24.6 28 0.002 29.1 3.9 27 57-86 7-33 (199)
355 d1sata2 d.92.1.6 (A:4-246) Met 24.2 13 0.00093 32.5 1.6 12 291-302 168-179 (243)
356 d1k7ia2 d.92.1.6 (A:18-258) Me 24.0 12 0.0009 32.6 1.5 12 291-302 166-177 (241)
357 d1f1ea_ a.22.1.2 (A:) Archaeal 23.8 33 0.0024 27.4 4.1 36 241-276 111-146 (151)
358 d1a04a2 c.23.1.1 (A:5-142) Nit 22.9 93 0.0068 23.6 6.8 49 168-219 74-122 (138)
359 d1dd5a_ d.67.3.1 (A:) Ribosome 22.4 1.7E+02 0.012 23.8 8.6 56 440-495 102-157 (184)
360 d1jfia_ a.22.1.3 (A:) Negative 22.4 14 0.001 25.2 1.1 29 243-271 37-65 (66)
361 d1ek8a_ d.67.3.1 (A:) Ribosome 22.2 1.7E+02 0.012 23.7 8.6 55 440-494 103-157 (185)
362 d1rw1a_ c.47.1.12 (A:) Hypothe 22.0 45 0.0033 24.9 4.4 32 62-93 2-33 (114)
363 d1p3da1 c.5.1.1 (A:11-106) UDP 20.0 51 0.0037 23.8 4.2 35 57-95 6-40 (96)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.2e-48 Score=380.78 Aligned_cols=256 Identities=50% Similarity=0.878 Sum_probs=234.9
Q ss_pred ceecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 15 MFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 15 ~~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
|+.+..+.++|+||+|++++|++|.+++.++++++.|.++|.++|+|+|||||||||||++|+++|++++.|++.+++++
T Consensus 1 ~~~~~~~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~ 80 (256)
T d1lv7a_ 1 MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSD 80 (256)
T ss_dssp CEEECSSCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCS
T ss_pred CCCCCCCCCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEE
Q 009263 95 FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVI 174 (539)
Q Consensus 95 ~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vi 174 (539)
+.+.|+|.++.+++.+|+.|+.++||||||||+|.++..++..... .......+++.|+..++++..+.+++
T Consensus 81 l~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~--------~~~~~~~~~~~ll~~~d~~~~~~~v~ 152 (256)
T d1lv7a_ 81 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGG--------GHDEREQTLNQMLVEMDGFEGNEGII 152 (256)
T ss_dssp STTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCC--------TTCHHHHHHHHHHHHHHTCCSSSCEE
T ss_pred hhhcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCC--------CcHHHHHHHHHHHHHhhCCCCCCCEE
Confidence 9999999999999999999999999999999999998876543222 23445678899999999998889999
Q ss_pred EEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHH
Q 009263 175 FLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVA 254 (539)
Q Consensus 175 vIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A 254 (539)
||+|||+|+.+|++++|||||+..|+|++|+.++|.+||+.++.+..+..++++..++..|.|||++||.++|++|...|
T Consensus 153 vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a 232 (256)
T d1lv7a_ 153 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 232 (256)
T ss_dssp EEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHHHHhcCC
Q 009263 255 VRKGHESILSSDMDDAVDRLTVGP 278 (539)
Q Consensus 255 ~~~~~~~I~~~d~~~a~~~~~~g~ 278 (539)
.++++..|+.+||+.|++++..|+
T Consensus 233 ~~~~~~~i~~~d~~~Al~rv~~g~ 256 (256)
T d1lv7a_ 233 ARGNKRVVSMVEFEKAKDKIMMGL 256 (256)
T ss_dssp HHTTCSSBCHHHHHHHHHHHTTCC
T ss_pred HHcCCCccCHHHHHHHHHHHhcCC
Confidence 999999999999999999998874
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.9e-47 Score=370.77 Aligned_cols=245 Identities=54% Similarity=0.906 Sum_probs=226.7
Q ss_pred CCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 19 GSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 19 ~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
+.|+++|+||+|++++|++|++++.++.+++.|.++|.++|+|+||+||||||||++|+++|++++.+++.++++++.+.
T Consensus 2 ~~p~~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~ 81 (247)
T d1ixza_ 2 EAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM 81 (247)
T ss_dssp CCCSCCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS
T ss_pred CCCCCcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 009263 99 LVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAA 178 (539)
Q Consensus 99 ~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaa 178 (539)
|+|.+++.++.+|..|+.++||||||||+|.++.++...... .+.....+++.|+..|+++..+.+|+||+|
T Consensus 82 ~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~--------~~~~~~~~~~~ll~~~d~~~~~~~vivi~t 153 (247)
T d1ixza_ 82 FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGG--------GNDEREQTLNQLLVEMDGFEKDTAIVVMAA 153 (247)
T ss_dssp CTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC-----------------CHHHHHHHHHHHHHHHTCCTTCCEEEEEE
T ss_pred cccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCC--------CcHHHHHHHHHHHHHhhCCCCCCCEEEEEe
Confidence 999999999999999999999999999999998876543222 334456789999999999988899999999
Q ss_pred cCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhC
Q 009263 179 TNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258 (539)
Q Consensus 179 tn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~ 258 (539)
||+|+.+|++++|||||+.+|+|++|+.++|.+||+.++.+.....+.++..+++.|.|||++||.++|++|...|.+++
T Consensus 154 Tn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~ 233 (247)
T d1ixza_ 154 TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG 233 (247)
T ss_dssp ESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred CCCCchhhHHHHH
Q 009263 259 HESILSSDMDDAV 271 (539)
Q Consensus 259 ~~~I~~~d~~~a~ 271 (539)
...|+.+||++|+
T Consensus 234 ~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 234 RRKITMKDLEEAA 246 (247)
T ss_dssp CSSBCHHHHHHHT
T ss_pred CCCcCHHHHHHhh
Confidence 9999999999986
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=4.3e-44 Score=350.32 Aligned_cols=239 Identities=43% Similarity=0.727 Sum_probs=218.6
Q ss_pred cCcCcccCcHHHHHHHHHHHHH-hcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhh
Q 009263 23 VKFSDVAGIDEAVEELQELVRY-LKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVG 101 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~-l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g 101 (539)
++|+||+|++.+|++|++.+.. +++++.|..+|..+|+|+|||||||||||++++++|++++.+++.++++.+.+.+.|
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g 80 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 80 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccc
Confidence 5899999999999999998886 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCC
Q 009263 102 VGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNR 181 (539)
Q Consensus 102 ~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~ 181 (539)
.....++.+|..|+..+||||||||+|.+..++.+. .++.....++.++..++....+.+++||+|||+
T Consensus 81 ~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~ 149 (258)
T d1e32a2 81 ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-----------HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 149 (258)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC-----------CCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESC
T ss_pred cHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCC-----------CCchHHHHHHHhccccccccccCCccEEEeCCC
Confidence 999999999999999999999999999999877542 122335677788888888888889999999999
Q ss_pred CCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCC--
Q 009263 182 RDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGH-- 259 (539)
Q Consensus 182 ~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~-- 259 (539)
++.+|++++|||||+.+|+|++|+.++|.+||+.++++..+..++++..++..|.|||++||.++|++|...|.++..
T Consensus 150 ~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~ 229 (258)
T d1e32a2 150 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 229 (258)
T ss_dssp GGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999888899999999999999999999999999999987642
Q ss_pred ---------------CCCchhhHHHHHH
Q 009263 260 ---------------ESILSSDMDDAVD 272 (539)
Q Consensus 260 ---------------~~I~~~d~~~a~~ 272 (539)
..|+++||+.|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 230 IDLEDETIDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp HCCCSSCCBHHHHHHCCBCHHHHHHHHT
T ss_pred cchhhhhhhhhhhccCccCHHHHHHHhC
Confidence 2377778887764
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.2e-41 Score=334.05 Aligned_cols=230 Identities=41% Similarity=0.735 Sum_probs=204.6
Q ss_pred CCcCcCcccCcHHHHHHHHHHHH-HhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHH
Q 009263 21 TGVKFSDVAGIDEAVEELQELVR-YLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVL 99 (539)
Q Consensus 21 ~~~~~~dv~G~~~~k~~L~~~v~-~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~ 99 (539)
|.++|+||+|++++|++|.+.+. .+.+++.|.++|..+++|+|||||||||||++|+++|++++.|++.++++++.+.+
T Consensus 2 p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~ 81 (265)
T d1r7ra3 2 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 81 (265)
T ss_dssp CCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhcc
Confidence 68899999999999999999887 58999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEec
Q 009263 100 VGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAAT 179 (539)
Q Consensus 100 ~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaat 179 (539)
.|.....++.+|..|+.++||||||||+|.++.++.....+ ...+..++++.++..++++..+.+++||+||
T Consensus 82 ~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~--------~~~~~~~~~~~ll~~l~~~~~~~~v~vi~tt 153 (265)
T d1r7ra3 82 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGD--------GGGAADRVINQILTEMDGMSTKKNVFIIGAT 153 (265)
T ss_dssp TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCT--------THHHHHHHHHHHHHTCC------CCEEEECC
T ss_pred ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCC--------CcHHHHHHHHHHHHHhhCcCCCCCEEEEEeC
Confidence 99999999999999999999999999999999876432222 3344566889999999988888889999999
Q ss_pred CCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhC
Q 009263 180 NRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKG 258 (539)
Q Consensus 180 n~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~ 258 (539)
|.++.+|++++|+|||+.+|+|++|+.++|.+||+.++.+.....++++..++..|.|||++||.++|++|...|.++.
T Consensus 154 n~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~ 232 (265)
T d1r7ra3 154 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 232 (265)
T ss_dssp BSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred CCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888999999999999999999999999999998775
No 5
>d2ce7a1 a.269.1.1 (A:411-603) Cell division protein FtsH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2e-38 Score=296.25 Aligned_cols=185 Identities=29% Similarity=0.483 Sum_probs=142.2
Q ss_pred cccccchhhhHHHHHHHHHHHHhhhcccccccccceeEEeeCC-ccccceeeecCccccccccCHHHHHHHHHHHhhHHH
Q 009263 285 LGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRG-QTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRA 363 (539)
Q Consensus 285 ~~~~~~~~~a~hEaGhAvv~~~l~~~~~~~~~~i~~vtI~prg-~~lG~~~~~~~~~~~~~~~t~~~l~~~i~v~LaGra 363 (539)
+++++++++|+||+||||++++++.. .++.+|||+||+ ..+|++.+.+. ++...+ ||.+++++|+|+|||||
T Consensus 2 ls~~er~~vA~HEAGHAlva~~l~~~-----~~i~~vsI~~r~~~~~g~~~~~~~-~~~~~~-t~~~l~~~i~v~LaGra 74 (193)
T d2ce7a1 2 ISPAEKRIIAYHEAGHAVVSTVVPNG-----EPVHRISIIPRGYKALGYTLHLPE-EDKYLV-SRNELLDKLTALLGGRA 74 (193)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSTTC-----CCCCEEECC------------------CCSC-BHHHHHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCC-----CceeEEEEecCccCCCceeecCCc-cccccC-cHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999876 678999999997 67888877764 344444 59999999999999999
Q ss_pred HHHHHhCCCCCCCCchhHHHHHHHHHHHHHHhCCCccccccCCCCCccccc--cccCCCcccCCCccCCCCCCCCCCCCC
Q 009263 364 AEEVIYGQDTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKV--KFVGPRLDFEGSLYDDYGLTEPPVNFN 441 (539)
Q Consensus 364 AEei~~g~~stg~~~~Dl~~At~~A~~~v~~~Gm~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (539)
||++|||+.|+|+++ ||++||.+|+.||..|||++.+ ||+.|.... .+.|... .....
T Consensus 75 AE~~~~g~~s~Ga~~-Dl~~At~lA~~~v~~~Gm~~~~----g~~~~~~~~~~~~~~~~~---------------~~~~~ 134 (193)
T d2ce7a1 75 AEEVVFGDVTSGAAN-DIERATEIARNMVCQLGMSEEL----GPLAWGKEEQEVFLGKEI---------------TRLRN 134 (193)
T ss_dssp HHHHHHSSCCGGGHH-HHHHHHHHHHHHHHTSCCCTTT----CSCCCCC----------------------------CCC
T ss_pred HHHHHhCCCCCCccC-cHHHHHHHHHHHHHhhCcCCCc----CceeeccCCccccccccc---------------ccccc
Confidence 999999999999986 9999999999999999999998 998887654 3333322 12223
Q ss_pred CcH----HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHhc
Q 009263 442 LDD----DIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNN 496 (539)
Q Consensus 442 ~~~----~~~~~v~~ll~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il~~ 496 (539)
+++ .++++|+++|+++|++|+++|++|++.|++||++|+++|+|+++||++||++
T Consensus 135 ~s~~~~~~id~ev~~ll~~a~~~a~~iL~~~~~~l~~la~~Lle~e~L~g~ei~~il~e 193 (193)
T d2ce7a1 135 YSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE 193 (193)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHHcC
Confidence 444 4566789999999999999999999999999999999999999999999863
No 6
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00 E-value=4.5e-38 Score=296.06 Aligned_cols=191 Identities=25% Similarity=0.412 Sum_probs=145.8
Q ss_pred cccccchhhhHHHHHHHHHHHHhhhcccccccccceeEEeeCCccccceeeecCccccccccCHHHHHHHHHHHhhHHHH
Q 009263 285 LGNQGQSRRAATEVGVAMISHLLRRYENAKVECCDRISIVPRGQTLSQLVFHRLDDESYMFERRPQLLHRLQVLLGGRAA 364 (539)
Q Consensus 285 ~~~~~~~~~a~hEaGhAvv~~~l~~~~~~~~~~i~~vtI~prg~~lG~~~~~~~~~~~~~~~t~~~l~~~i~v~LaGraA 364 (539)
+++++++++|+||+||||++++++.. .++.+|||+|||+++|+.++.+. ++.... ||.+++++|+|+||||||
T Consensus 2 ls~~ek~~vA~HEAGHAvva~~l~~~-----~~v~~vtI~prg~~~g~~~~~~~-~~~~~~-t~~~l~~~i~v~LgGraA 74 (202)
T d2di4a1 2 ISPKEKEKIAIHEAGHALMGLVSDDD-----DKVHKISIIPRGMALGVTQQLPI-EDKHIY-DKKDLYNKILVLLGGRAA 74 (202)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCSSC-----CCCCCEECC-----------------CCCC-BHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCC-----CceeEEEEecCCccccccccCcc-cccchh-hHHHHHHHHHHHHhhhhc
Confidence 67889999999999999999999876 67899999999999998887764 344444 499999999999999999
Q ss_pred HHHHhCC--CCCCCCchhHHHHHHHHHHHHHHhCCCccccccCCCCCccccc-cccCCCcccCCCccCCCCCCCCCCCCC
Q 009263 365 EEVIYGQ--DTSRASVNYLADASWLARKILTIWNLENPMVIHGEPPPWRKKV-KFVGPRLDFEGSLYDDYGLTEPPVNFN 441 (539)
Q Consensus 365 Eei~~g~--~stg~~~~Dl~~At~~A~~~v~~~Gm~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (539)
|+++||. +++|+++ |+++||++|+.||+.|||++.+ |++.|.... .+.+. ......
T Consensus 75 E~i~~g~~~~~~g~~~-dl~~At~~A~~~v~~~G~~~~~----~~~~~~~~~~~~~~~----------------~~~~~~ 133 (202)
T d2di4a1 75 EEVFFGKDGITTGAEN-DLQRATDLAYRMVSMWGMSDKV----GPIAIRRVANPFLGG----------------MTTAVD 133 (202)
T ss_dssp HHHHHHHHHCCGGGHH-HHHHHHHHHHHHHHTSCCCTTT----CSCCCCC--------------------------CCCS
T ss_pred ceeeecCcccccCccc-hHHHHHHHHHHHHHhhCccccc----chhhhcccccchhhh----------------hhcccc
Confidence 9999996 5677775 9999999999999999999987 777766543 11111 012234
Q ss_pred CcHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHhcCCCCCCc
Q 009263 442 LDDD----IAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILNNYPPQTPI 503 (539)
Q Consensus 442 ~~~~----~~~~v~~ll~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il~~~~~~~~~ 503 (539)
+|++ ++++|+++|+++|++|++||++|++.|++||++|+++|||+++||++|++.|+.+.|.
T Consensus 134 ~s~~~~~~id~ev~~ll~~a~~~a~~iL~~~~~~l~~la~~Lle~etL~~~ei~~il~~~~~~~~~ 199 (202)
T d2di4a1 134 TSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLYGIELKD 199 (202)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHHTCCCCC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCHHHHHHHHHHCCCCCcc
Confidence 5555 4567899999999999999999999999999999999999999999999988755543
No 7
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.94 E-value=6e-32 Score=267.70 Aligned_cols=205 Identities=14% Similarity=0.166 Sum_probs=153.4
Q ss_pred cChhhhhhcCCCCCceEEE-ECCCCCcHHHHHHHHHHhcC--CCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhCCCeEE
Q 009263 46 KNPELFDKMGIKPPHGVLL-EGPPGCGKTLVAKAIAGEAG--VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVI 122 (539)
Q Consensus 46 ~~~~~~~~~g~~~~~giLL-~GppGtGKT~la~alA~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il 122 (539)
..|..+..+|.+.|+|++| +||||||||++|+++|.+++ .+|+.++++++.++|+|.++++++.+|+.|+. ||||
T Consensus 109 ~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~il 186 (321)
T d1w44a_ 109 CSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HRVI 186 (321)
T ss_dssp BCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CSEE
T ss_pred cchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--ccEE
Confidence 3567777888888888765 89999999999999999985 78999999999999999999999999999985 7899
Q ss_pred EEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCC---CcCCccccCCCccceee
Q 009263 123 FIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRR---DLLDPALLRPGRFDRKI 199 (539)
Q Consensus 123 ~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~---~~ld~al~r~gRf~~~i 199 (539)
||||||.+.+++++... .....+++|++|.+||++....+|+||+|||+. +.+++++.|||||++.+
T Consensus 187 f~DEid~~~~~r~~~~~----------~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~~~~i~~~~~r~~Rf~~~v 256 (321)
T d1w44a_ 187 VIDSLKNVIGAAGGNTT----------SGGISRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTS 256 (321)
T ss_dssp EEECCTTTC---------------------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCCCHHHHHHHHHHHHHSCSE
T ss_pred EeehhhhhccccccCCC----------CCcchhhhhhhhhhccccccCCCeEEEEeCCCcccccchhhhhhccCccccee
Confidence 99999999988854321 122246899999999999888899999999952 23556678999999999
Q ss_pred ecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhcCC
Q 009263 200 RIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGP 278 (539)
Q Consensus 200 ~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~g~ 278 (539)
.++.|+.++|.+|++.+...... ++.++.+.++++...+.+..+..+.+.+..+|+++++.+.
T Consensus 257 ~v~~pd~~~r~~il~~~~~~~~~----------------~~~~l~~~~~~~a~la~~~~~~~~~~~~~~~Ai~~via~~ 319 (321)
T d1w44a_ 257 LVISTDVDGEWQVLTRTGEGLQR----------------LTHTLQTSYGEHSVLTIHTSKQSGGKQASGKAIQTVIKND 319 (321)
T ss_dssp EEEECSSTTEEEEEEECBTTCCE----------------EEEEEEEEECGGGCEEECCC------CEECHHHHHHHHHT
T ss_pred ecCCCChHHHHHHHHHhccCccc----------------cchhhhhccCHHHHHHHHhccccchhhhHHHHHHHHHcCC
Confidence 99999999999998766544321 2233444455555555556666777777778887776543
No 8
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.91 E-value=1.9e-24 Score=208.30 Aligned_cols=193 Identities=23% Similarity=0.359 Sum_probs=137.1
Q ss_pred cCcccCcHHHHHHH----HHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHh
Q 009263 25 FSDVAGIDEAVEEL----QELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 100 (539)
Q Consensus 25 ~~dv~G~~~~k~~L----~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~ 100 (539)
.+.++|+.+..+.+ ..++..++++. ..+++++||+||||||||++|+++|++++.||+.+++++....+.
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~~------~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~ 81 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNSD------RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFS 81 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHCS------SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCC
T ss_pred ccCCcCcCHHHHHHHHHHHHHHHHHhccC------CCCCeEEEEECcCCCCHHHHHHHHhhccccccccccccccccccc
Confidence 45577765544433 33333333322 357789999999999999999999999999999999887655554
Q ss_pred hhh-hHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCC-CCcEEEEEe
Q 009263 101 GVG-SARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDT-GKGVIFLAA 178 (539)
Q Consensus 101 g~~-~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~-~~~vivIaa 178 (539)
+.. ...++.+|..|+..+||||||||||.+...+.... ......++.|+..+++... ..+|+||+|
T Consensus 82 ~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~------------~~~~~~~~~ll~~l~~~~~~~~~v~vi~t 149 (246)
T d1d2na_ 82 ETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGP------------RFSNLVLQALLVLLKKAPPQGRKLLIIGT 149 (246)
T ss_dssp HHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTT------------BCCHHHHHHHHHHTTCCCSTTCEEEEEEE
T ss_pred ccchhhhhhhhhhhhhhcccceeehhhhhhHhhhccccc------------chhHHHHHHHHHHhcCCCccccceeeeec
Confidence 443 46689999999999999999999999987654311 1123567788888887754 347899999
Q ss_pred cCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCC
Q 009263 179 TNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWT 239 (539)
Q Consensus 179 tn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s 239 (539)
||+++.+|++.++ +||+..|++ |+..+|.+|++.+-....+ .+.+...++..+.|.+
T Consensus 150 Tn~~~~ld~~~~~-~rF~~~i~~--P~~~~r~~il~~l~~~~~~-~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 150 TSRKDVLQEMEML-NAFSTTIHV--PNIATGEQLLEALELLGNF-KDKERTTIAQQVKGKK 206 (246)
T ss_dssp ESCHHHHHHTTCT-TTSSEEEEC--CCEEEHHHHHHHHHHHTCS-CHHHHHHHHHHHTTSE
T ss_pred cCChhhccchhhc-CccceEEec--CCchhHHHHHHHHHhccCC-ChHHHHHHHHHcCCCc
Confidence 9999999876443 499999988 5555666666544332222 3334666777666643
No 9
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.90 E-value=1.3e-22 Score=194.55 Aligned_cols=230 Identities=20% Similarity=0.219 Sum_probs=164.8
Q ss_pred CCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHh
Q 009263 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 100 (539)
Q Consensus 21 ~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~ 100 (539)
+|.+|+|++|++++++.|+.++...... ..++.++|||||||||||++|+++|++++.+++.+++.+....
T Consensus 4 RP~~~~divGqe~~~~~l~~~i~~~~~~-------~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~-- 74 (238)
T d1in4a2 4 RPKSLDEFIGQENVKKKLSLALEAAKMR-------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQ-- 74 (238)
T ss_dssp SCSSGGGCCSCHHHHHHHHHHHHHHHHH-------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSH--
T ss_pred CCCcHHHcCChHHHHHHHHHHHHHHHhc-------CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccH--
Confidence 5779999999999999999988653211 2345689999999999999999999999999999998776432
Q ss_pred hhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 009263 101 GVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATN 180 (539)
Q Consensus 101 g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn 180 (539)
..+...+.. ....++++|||+|.+....+.......+.... .......... ..+. ....++++|++||
T Consensus 75 ----~~~~~~~~~--~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~---~~~~--~~~~~~~~I~at~ 142 (238)
T d1in4a2 75 ----GDMAAILTS--LERGDVLFIDEIHRLNKAVEELLYSAIEDFQI-DIMIGKGPSA---KSIR--IDIQPFTLVGATT 142 (238)
T ss_dssp ----HHHHHHHHH--CCTTCEEEEETGGGCCHHHHHHHHHHHHTSCC-CC--------------------CCCEEEEEES
T ss_pred ----HHHHHHHHh--hccCCchHHHHHHHhhhHHHhhcccceeeeee-eeeecCcccc---cccc--cCCCCeEEEEecC
Confidence 223333333 23457999999999865432110000000000 0000000000 0000 1234688999999
Q ss_pred CCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCC-HHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCC
Q 009263 181 RRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVD-LSSYAKNLPGWTGARLAQLVQEAALVAVRKGH 259 (539)
Q Consensus 181 ~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~-~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~ 259 (539)
.+..+++++++ ||+..+.++.|+.+++..+++..+.......+.+ +..++..+.| +.+.+.++++.+...+...+.
T Consensus 143 ~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~~~~~ 219 (238)
T d1in4a2 143 RSGLLSSPLRS--RFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLTVVKA 219 (238)
T ss_dssp CGGGSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcccccccee--eeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999 9999999999999999999999888766554333 6777877766 789999999999888888888
Q ss_pred CCCchhhHHHHHHHH
Q 009263 260 ESILSSDMDDAVDRL 274 (539)
Q Consensus 260 ~~I~~~d~~~a~~~~ 274 (539)
..||.+++.++++.+
T Consensus 220 ~~it~~~~~~al~~l 234 (238)
T d1in4a2 220 DRINTDIVLKTMEVL 234 (238)
T ss_dssp SSBCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHhh
Confidence 899999999998765
No 10
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.89 E-value=2.7e-22 Score=192.42 Aligned_cols=218 Identities=22% Similarity=0.263 Sum_probs=163.3
Q ss_pred CCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHh
Q 009263 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 100 (539)
Q Consensus 21 ~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~ 100 (539)
+|.+|+|++|+++++++|+.++...+.. ..++.++|||||||||||++|+++|++++.++..++++.....
T Consensus 4 RP~~~ddivGq~~~~~~L~~~i~~~~~~-------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~-- 74 (239)
T d1ixsb2 4 RPKTLDEYIGQERLKQKLRVYLEAAKAR-------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP-- 74 (239)
T ss_dssp CCCSGGGSCSCHHHHHHHHHHHHHHTTS-------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH--
T ss_pred CCCCHHHhCCHHHHHHHHHHHHHHHHhc-------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc--
Confidence 6789999999999999999998765433 2456789999999999999999999999999999998765432
Q ss_pred hhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHH--hcC-----------C
Q 009263 101 GVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIE--LDG-----------F 167 (539)
Q Consensus 101 g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--ld~-----------~ 167 (539)
+ .......... ...+|++|||+|.+....+ ..+...+.. ++. .
T Consensus 75 ~----~~~~~~~~~~-~~~~i~~iDe~~~~~~~~~-------------------~~l~~~~e~~~~~~~~~~~~~~~~~~ 130 (239)
T d1ixsb2 75 G----DLAAILANSL-EEGDILFIDEIHRLSRQAE-------------------EHLYPAMEDFVMDIVIGQGPAARTIR 130 (239)
T ss_dssp H----HHHHHHHTTC-CTTCEEEEETGGGCCHHHH-------------------HHHHHHHHHSEEEEECSCTTCCCEEE
T ss_pred h----hhHHHHHhhc-cCCCeeeeecccccchhHH-------------------Hhhhhhhhhhhhhhhhccchhhhhcc
Confidence 1 1112222222 2456999999999865432 111111111 000 1
Q ss_pred CCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCC-CHHHHHhhCCCCCHHHHHHH
Q 009263 168 DTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSV-DLSSYAKNLPGWTGARLAQL 246 (539)
Q Consensus 168 ~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~-~~~~la~~t~g~s~~dl~~l 246 (539)
....++++|++||.+...+++.++ |++..+.+..|+.+++..++...+....+..+. .+..++..+.| +.+...++
T Consensus 131 ~~~~~~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~~~ 207 (239)
T d1ixsb2 131 LELPRFTLIGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAKRL 207 (239)
T ss_dssp EECCCCEEEEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHHHH
T ss_pred cCCCCEEEEeeccCcccccchhhc--ccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCC-CHHHHHHH
Confidence 123567888889988888888888 788999999999999999999888776654332 36788888888 78888889
Q ss_pred HHHHHHHHHHhCCCCCchhhHHHHHHHH
Q 009263 247 VQEAALVAVRKGHESILSSDMDDAVDRL 274 (539)
Q Consensus 247 v~~A~~~A~~~~~~~I~~~d~~~a~~~~ 274 (539)
++.+..+|...+...||.+++.+++..+
T Consensus 208 l~~~~~~a~~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 208 FRRVRDFAQVAGEEVITRERALEALAAL 235 (239)
T ss_dssp HHHHHHHHTTSCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCHHHHHHHHhhh
Confidence 9988888877788889999999998755
No 11
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.88 E-value=5.6e-23 Score=204.81 Aligned_cols=178 Identities=26% Similarity=0.381 Sum_probs=137.5
Q ss_pred cccCcHHHHHHHHHHHHH-hcChhhhhhc-CCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH--Hhhh
Q 009263 27 DVAGIDEAVEELQELVRY-LKNPELFDKM-GIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV--LVGV 102 (539)
Q Consensus 27 dv~G~~~~k~~L~~~v~~-l~~~~~~~~~-g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~--~~g~ 102 (539)
.|+|++++|+.+...+.. ++........ ...+|+|+||+||||||||+||+++|+.++.+++.++++++... +.+.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeee
Confidence 389999999999887742 2222111111 12378999999999999999999999999999999999999744 7888
Q ss_pred hhHHHHHHHHHHHhC-----CCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCC--------
Q 009263 103 GSARIRDLFKRAKVN-----KPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDT-------- 169 (539)
Q Consensus 103 ~~~~~~~~f~~a~~~-----~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~-------- 169 (539)
....++.+|..|... .||||||||||.+++++.+... ......+++.||..+++...
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~----------~~~~~gv~~~LL~~~dg~~~~~~~~~i~ 164 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGA----------DVSREGVQRDLLPLVEGSTVSTKHGMVK 164 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSS----------HHHHHHHHHHHHHHHHCCEEEETTEEEE
T ss_pred ccccccccchhhhcccccccCCceEEehhhhhhhhhccCccc----------chhhhHHHHHhhHHhcCCEEecCCeEEE
Confidence 888999999987543 5899999999999876654321 22234578889999987431
Q ss_pred CCcEEEEEe----cCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHH
Q 009263 170 GKGVIFLAA----TNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIH 216 (539)
Q Consensus 170 ~~~vivIaa----tn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~ 216 (539)
..++++|++ ++.+..++|+++. ||+..+.+++|+..++.+|++.+
T Consensus 165 ~s~ilfi~~ga~~~~~~~~~~p~l~~--R~~~~i~~~~~~~~~~~~Il~~~ 213 (309)
T d1ofha_ 165 TDHILFIASGAFQVARPSDLIPELQG--RLPIRVELTALSAADFERILTEP 213 (309)
T ss_dssp CTTCEEEEEECCSSSCGGGSCHHHHH--TCCEEEECCCCCHHHHHHHHHSS
T ss_pred ccceeEEeccchhhcCcccchhhhhh--hhheeeeccCCCHHHHHHHHHHH
Confidence 234666765 5677788888886 99999999999999999998654
No 12
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=2.5e-19 Score=172.70 Aligned_cols=228 Identities=20% Similarity=0.279 Sum_probs=148.0
Q ss_pred hceecCCCCcCcCcccCcHHHHHHHHHHHHHhcChh-----hhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 14 AMFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPE-----LFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 14 ~~~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~-----~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
.||.+++.|.+|+||+|+++.+++|.+++....... .....+....+++||+||||||||++|+++|++++.+++
T Consensus 2 ~lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~ 81 (253)
T d1sxja2 2 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDIL 81 (253)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEE
T ss_pred CccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhh
Confidence 578999999999999999999999998876422111 112234456678999999999999999999999999999
Q ss_pred EEeCchhhHHHhhhhh-HH-H-----HHHH-----HHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHH
Q 009263 89 QMAGSEFVEVLVGVGS-AR-I-----RDLF-----KRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETT 156 (539)
Q Consensus 89 ~~~~~~~~~~~~g~~~-~~-~-----~~~f-----~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (539)
.+++++..+.+..... .. + ...+ .......+.++++||+|.+....+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~-------------------~ 142 (253)
T d1sxja2 82 EQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRG-------------------G 142 (253)
T ss_dssp EECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTT-------------------H
T ss_pred ccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhh-------------------h
Confidence 9998876543221100 00 0 0000 0011234569999999997654321 1
Q ss_pred HHHHHHHhcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCC-CCCCHHHHHhhC
Q 009263 157 LNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMS-DSVDLSSYAKNL 235 (539)
Q Consensus 157 l~~ll~~ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~-~~~~~~~la~~t 235 (539)
+..++.... .....++++++++....+++ ++ |+...|+|++|+.+++..+++..+.+.++. .+..++.++..+
T Consensus 143 ~~~~~~~~~--~~~~~ii~i~~~~~~~~~~~-l~---~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s 216 (253)
T d1sxja2 143 VGQLAQFCR--KTSTPLILICNERNLPKMRP-FD---RVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTT 216 (253)
T ss_dssp HHHHHHHHH--HCSSCEEEEESCTTSSTTGG-GT---TTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHT
T ss_pred hHHHhhhhc--cccccccccccccccccccc-cc---ceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 222332222 12234556555555555553 44 567899999999999999999988654432 222478888888
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHH
Q 009263 236 PGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVD 272 (539)
Q Consensus 236 ~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~ 272 (539)
.| |++.+++..-..+ .....++.+++.+...
T Consensus 217 ~G----DiR~ai~~L~~~~--~~~~~i~~~~~~~~~~ 247 (253)
T d1sxja2 217 RG----DIRQVINLLSTIS--TTTKTINHENINEISK 247 (253)
T ss_dssp TT----CHHHHHHHHTHHH--HHSSCCCTTHHHHHHH
T ss_pred CC----cHHHHHHHHHHHH--HcCCCCCHHHHHHHhc
Confidence 66 6666665433332 2345688888776654
No 13
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=5.2e-20 Score=174.80 Aligned_cols=216 Identities=19% Similarity=0.176 Sum_probs=144.7
Q ss_pred eecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCC-----EEEE
Q 009263 16 FSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP-----FYQM 90 (539)
Q Consensus 16 ~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~-----~~~~ 90 (539)
|.+++.|.+|+|++|++++++.|+.++..- .. .++||+||||||||++|+++|++++.. ++..
T Consensus 4 w~ekyrP~~~~divg~~~~~~~L~~~i~~~-----------~~-~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~ 71 (227)
T d1sxjc2 4 WVEKYRPETLDEVYGQNEVITTVRKFVDEG-----------KL-PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 71 (227)
T ss_dssp HHHHTCCSSGGGCCSCHHHHHHHHHHHHTT-----------CC-CCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEE
T ss_pred hhhhhCCCCHHHccCcHHHHHHHHHHHHcC-----------CC-CeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEe
Confidence 567789999999999999999998876421 12 258999999999999999999987432 4556
Q ss_pred eCchhhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCC
Q 009263 91 AGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTG 170 (539)
Q Consensus 91 ~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~ 170 (539)
+.++................+.........+++|||+|.+... ..+.|+..++. ..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~----------------------~~~~Ll~~le~--~~ 127 (227)
T d1sxjc2 72 NASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA----------------------AQNALRRVIER--YT 127 (227)
T ss_dssp CTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHH----------------------HHHHHHHHHHH--TT
T ss_pred cccccCCeeeeecchhhccccccccCCCeEEEEEeccccchhh----------------------HHHHHHHHhhh--cc
Confidence 5554433211111100000011111223459999999987533 22344444542 33
Q ss_pred CcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCC-CCHHHHHhhCCCCCHHHHHHHHHH
Q 009263 171 KGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDS-VDLSSYAKNLPGWTGARLAQLVQE 249 (539)
Q Consensus 171 ~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~-~~~~~la~~t~g~s~~dl~~lv~~ 249 (539)
...+++.+||.+..+++++++ |+ ..+.|++|+.++...++...+...++.-+ ..++.+++.+.| +.+.+-++++.
T Consensus 128 ~~~~~~~~~~~~~~i~~~i~s--r~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain~Lq~ 203 (227)
T d1sxjc2 128 KNTRFCVLANYAHKLTPALLS--QC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLNVLQS 203 (227)
T ss_dssp TTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHHHTTT
T ss_pred cceeeccccCcHHHhHHHHHH--HH-hhhccccccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHHHHHH
Confidence 567888899999999999998 64 67899999999999999988876654422 236778888777 45555555554
Q ss_pred HHHHHHHhCCCCCchhhHHHHH
Q 009263 250 AALVAVRKGHESILSSDMDDAV 271 (539)
Q Consensus 250 A~~~A~~~~~~~I~~~d~~~a~ 271 (539)
+...+...+...|+.+++.+++
T Consensus 204 ~~~~~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 204 CKATLDNPDEDEISDDVIYECC 225 (227)
T ss_dssp TTTTTCSSSCCCBCHHHHHHHT
T ss_pred HHHhcCCCCCCeeCHHHHHHHh
Confidence 4443434455678888887764
No 14
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.80 E-value=2.6e-19 Score=170.46 Aligned_cols=209 Identities=21% Similarity=0.246 Sum_probs=145.0
Q ss_pred hceecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcC-----CCEE
Q 009263 14 AMFSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG-----VPFY 88 (539)
Q Consensus 14 ~~~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~-----~~~~ 88 (539)
.-|.+++.|.+|+||+|++++++.|+.++..- ...++||+||||||||++|+++|++++ .+++
T Consensus 12 ~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~------------~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~ 79 (231)
T d1iqpa2 12 KPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG------------SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFL 79 (231)
T ss_dssp SCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHT------------CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEE
T ss_pred chHHHHhCCCCHHHccCcHHHHHHHHHHHHcC------------CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCee
Confidence 34678889999999999999999998887532 223699999999999999999999874 4678
Q ss_pred EEeCchhhHHHhhhhhHHHHHHHH--HHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcC
Q 009263 89 QMAGSEFVEVLVGVGSARIRDLFK--RAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDG 166 (539)
Q Consensus 89 ~~~~~~~~~~~~g~~~~~~~~~f~--~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~ 166 (539)
.+++++...... .......... ......+.|+++||+|.+.... .+.|+..++
T Consensus 80 e~n~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~iilide~d~~~~~~----------------------~~~ll~~l~- 134 (231)
T d1iqpa2 80 ELNASDERGINV--IREKVKEFARTKPIGGASFKIIFLDEADALTQDA----------------------QQALRRTME- 134 (231)
T ss_dssp EEETTCHHHHHT--THHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHH----------------------HHHHHHHHH-
T ss_pred EEecCcccchhH--HHHHHHHHHhhhhccCCCceEEeehhhhhcchhH----------------------HHHHhhhcc-
Confidence 888876543211 1111111111 1123456799999999875432 223334443
Q ss_pred CCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCC-CCCCHHHHHhhCCCCCHHHHHH
Q 009263 167 FDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMS-DSVDLSSYAKNLPGWTGARLAQ 245 (539)
Q Consensus 167 ~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~dl~~ 245 (539)
....++++|++||.+..+++++.+ |+ ..+.+++|+..+...+++..+.+..+. .+..+..+++.+.| +.+++.+
T Consensus 135 -~~~~~~~~i~~~n~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~ 209 (231)
T d1iqpa2 135 -MFSSNVRFILSCNYSSKIIEPIQS--RC-AIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAIN 209 (231)
T ss_dssp -HTTTTEEEEEEESCGGGSCHHHHH--TE-EEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHH
T ss_pred -cCCcceEEEeccCChhhchHhHhC--cc-ccccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC-CHHHHHH
Confidence 234567889999999999999998 76 479999999999999999998876654 22236778877766 5555555
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHH
Q 009263 246 LVQEAALVAVRKGHESILSSDMDD 269 (539)
Q Consensus 246 lv~~A~~~A~~~~~~~I~~~d~~~ 269 (539)
+++.+. .....|+.+++..
T Consensus 210 ~Lq~~~-----~~~~~it~e~v~~ 228 (231)
T d1iqpa2 210 ILQAAA-----ALDKKITDENVFM 228 (231)
T ss_dssp HHHHHH-----TTCSEECHHHHHH
T ss_pred HHHHHH-----HcCCCcCHHHHHh
Confidence 444332 2345677776644
No 15
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.78 E-value=9.8e-19 Score=167.46 Aligned_cols=206 Identities=20% Similarity=0.301 Sum_probs=148.4
Q ss_pred ecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCC----------
Q 009263 17 SQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP---------- 86 (539)
Q Consensus 17 ~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~---------- 86 (539)
.++++|.+|+|++|++++++.|..++.. -+.|.++||+||||+|||++|+++++.++.+
T Consensus 3 ~~KyrP~~~~dlig~~~~~~~L~~~i~~-----------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~ 71 (239)
T d1njfa_ 3 ARKWRPQTFADVVGQEHVLTALANGLSL-----------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGV 71 (239)
T ss_dssp HHHTCCSSGGGSCSCHHHHHHHHHHHHT-----------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSC
T ss_pred hhhhCCCCHHHccChHHHHHHHHHHHHc-----------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCcccc
Confidence 4678899999999999999999877642 1456789999999999999999999987432
Q ss_pred --------------EEEEeCchhhHHHhhhhhHHHHHHHHHHHh----CCCeEEEEeCcchhhhhhcCCcCCchhhhhhh
Q 009263 87 --------------FYQMAGSEFVEVLVGVGSARIRDLFKRAKV----NKPSVIFIDEIDALATRRQGIFKDTTDHLYNA 148 (539)
Q Consensus 87 --------------~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~----~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~ 148 (539)
++.++.++.. +...++.++..+.. ....|++|||+|.+...
T Consensus 72 ~~~~~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~--------------- 130 (239)
T d1njfa_ 72 CDNCREIEQGRFVDLIEIDAASRT------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRH--------------- 130 (239)
T ss_dssp SHHHHHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHH---------------
T ss_pred chHHHHHHcCCCCeEEEecchhcC------CHHHHHHHHHHHHhccccCCCEEEEEECcccCCHH---------------
Confidence 3344332211 12335555555432 23359999999997432
Q ss_pred hhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCC-CCCC
Q 009263 149 ATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMS-DSVD 227 (539)
Q Consensus 149 ~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~-~~~~ 227 (539)
..+.|+..|+. .+.++.+|++||.++.+.+++++ |+ ..+.+++|+.++...++...+...+.. ++..
T Consensus 131 -------~q~~Llk~lE~--~~~~~~~il~tn~~~~i~~~i~S--Rc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~ 198 (239)
T d1njfa_ 131 -------SFNALLKTLEE--PPEHVKFLLATTDPQKLPVTILS--RC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRA 198 (239)
T ss_dssp -------HHHHHHHHHHS--CCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHH
T ss_pred -------HHHHHHHHHhc--CCCCeEEEEEcCCccccChhHhh--hh-cccccccCcHHHhhhHHHHHHhhhccCCCHHH
Confidence 24567777763 45677888899999999999998 75 688999999999999888877654432 2223
Q ss_pred HHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHH
Q 009263 228 LSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAV 271 (539)
Q Consensus 228 ~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~ 271 (539)
++.++..+.| +.+.+.+++..+ ...+...|+.+++.+++
T Consensus 199 l~~i~~~s~G-d~R~ain~l~~~----~~~~~~~I~~~~v~~~l 237 (239)
T d1njfa_ 199 LQLLARAAEG-SLRDALSLTDQA----IASGDGQVSTQAVSAML 237 (239)
T ss_dssp HHHHHHHTTT-CHHHHHHHHHHH----HHHTTTSBCHHHHHHHH
T ss_pred HHHHHHHcCC-CHHHHHHHHHHH----HHhCCCCcCHHHHHHHh
Confidence 7788888877 566666665543 34566789999988765
No 16
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=8.4e-18 Score=160.07 Aligned_cols=214 Identities=18% Similarity=0.217 Sum_probs=145.8
Q ss_pred eecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc------CCCEEE
Q 009263 16 FSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA------GVPFYQ 89 (539)
Q Consensus 16 ~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~------~~~~~~ 89 (539)
|.+++.|.+|+|++|++++++.|+.++. .. ...++||+||||||||++++++|+++ ....+.
T Consensus 2 w~~ky~P~~~~diig~~~~~~~l~~~i~---~~---------~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~ 69 (237)
T d1sxjd2 2 WVEKYRPKNLDEVTAQDHAVTVLKKTLK---SA---------NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 69 (237)
T ss_dssp HHHHTCCSSTTTCCSCCTTHHHHHHHTT---CT---------TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred cchhhCCCCHHHccCcHHHHHHHHHHHH---cC---------CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhh
Confidence 4567899999999999999888876542 22 12359999999999999999999986 456666
Q ss_pred EeCchhhHHHhhhhhHHHHH------------HHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHH
Q 009263 90 MAGSEFVEVLVGVGSARIRD------------LFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTL 157 (539)
Q Consensus 90 ~~~~~~~~~~~g~~~~~~~~------------~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (539)
++++........ ...+.. .+.........|++|||+|.+.... .
T Consensus 70 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~----------------------~ 125 (237)
T d1sxjd2 70 LNASDERGISIV--REKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA----------------------Q 125 (237)
T ss_dssp ECSSSCCCHHHH--TTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHH----------------------H
T ss_pred eeccccccchHH--HHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHH----------------------H
Confidence 665544322110 011111 1111122234599999999875432 1
Q ss_pred HHHHHHhcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCC-CCHHHHHhhCC
Q 009263 158 NQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDS-VDLSSYAKNLP 236 (539)
Q Consensus 158 ~~ll~~ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~-~~~~~la~~t~ 236 (539)
+.++..++ ......++|.+++....+.+++.+ |+ ..+.|++|+.++...+++..+.+.++.-+ ..+..++..+.
T Consensus 126 ~~l~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~ 200 (237)
T d1sxjd2 126 SALRRTME--TYSGVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISA 200 (237)
T ss_dssp HHHHHHHH--HTTTTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTS
T ss_pred HHHhhccc--cccccccccccccccccccccccc--hh-hhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcC
Confidence 22222222 123456777788888889999988 76 68899999999999999998887655422 22678888887
Q ss_pred CCCHHHHHHHHHHHHHHHHHhC-CCCCchhhHHHHH
Q 009263 237 GWTGARLAQLVQEAALVAVRKG-HESILSSDMDDAV 271 (539)
Q Consensus 237 g~s~~dl~~lv~~A~~~A~~~~-~~~I~~~d~~~a~ 271 (539)
| +.+.+-++++.+...+...+ ...|+.+++++++
T Consensus 201 g-d~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 201 G-DLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 235 (237)
T ss_dssp S-CHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHhchhcCCCCccCHHHHHHhh
Confidence 7 67776677777766665443 4578999888764
No 17
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=5.1e-18 Score=160.61 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=141.4
Q ss_pred eecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCC-----CEEEE
Q 009263 16 FSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGV-----PFYQM 90 (539)
Q Consensus 16 ~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~-----~~~~~ 90 (539)
|.++++|.+|+|++|++++++.|+.++..- ...++||+||||+|||++|+.+|++++. .++.+
T Consensus 5 w~eKyrP~~~~d~ig~~~~~~~L~~~~~~~------------~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~ 72 (224)
T d1sxjb2 5 WVEKYRPQVLSDIVGNKETIDRLQQIAKDG------------NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL 72 (224)
T ss_dssp HHHHTCCSSGGGCCSCTHHHHHHHHHHHSC------------CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEE
T ss_pred hHhHhCCCCHHHhcCCHHHHHHHHHHHHcC------------CCCeEEEECCCCCCchhhHHHHHHHHhccccccccccc
Confidence 456799999999999999999998876421 1225899999999999999999998854 36677
Q ss_pred eCchhhHHHhhhhhHHHHHHHHHHH-------hCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHH
Q 009263 91 AGSEFVEVLVGVGSARIRDLFKRAK-------VNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIE 163 (539)
Q Consensus 91 ~~~~~~~~~~g~~~~~~~~~f~~a~-------~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 163 (539)
++++.... ..+...+.... .....+++|||+|.+....+ +.|+..
T Consensus 73 n~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~----------------------~~ll~~ 124 (224)
T d1sxjb2 73 NASDDRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ----------------------QALRRT 124 (224)
T ss_dssp CTTSCCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHH----------------------HTTHHH
T ss_pred cccccCCc------eehhhHHHHHHHhhccCCCcceEEEEEecccccchhHH----------------------HHHhhh
Confidence 76654322 11222222111 12345999999999765422 233333
Q ss_pred hcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCC-CHHHHHhhCCCCCHHH
Q 009263 164 LDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSV-DLSSYAKNLPGWTGAR 242 (539)
Q Consensus 164 ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~-~~~~la~~t~g~s~~d 242 (539)
++ .......++.+|+....+.+++++ |+ ..|.|++|+.++...++...+.+.++.-+. .+..++..+.| +.+.
T Consensus 125 ~e--~~~~~~~~i~~~~~~~~i~~~l~s--r~-~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~G-d~R~ 198 (224)
T d1sxjb2 125 ME--LYSNSTRFAFACNQSNKIIEPLQS--QC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG-DMRQ 198 (224)
T ss_dssp HH--HTTTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTT-CHHH
T ss_pred cc--ccccceeeeeccCchhhhhhHHHH--HH-HHhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCC-cHHH
Confidence 33 234567788889999999999998 75 579999999999999999888765543222 26777887766 4555
Q ss_pred HHHHHHHHHHHHHHhCCCCCchhhHHHHHH
Q 009263 243 LAQLVQEAALVAVRKGHESILSSDMDDAVD 272 (539)
Q Consensus 243 l~~lv~~A~~~A~~~~~~~I~~~d~~~a~~ 272 (539)
+-+.++.+ .. +...|+.+++.+.++
T Consensus 199 ai~~Lq~~---~~--~~~~i~~~~i~~~~d 223 (224)
T d1sxjb2 199 AINNLQST---VA--GHGLVNADNVFKIVD 223 (224)
T ss_dssp HHHHHHHH---HH--HHSSBCHHHHHHHHT
T ss_pred HHHHHHHH---HH--cCCCcCHHHHHHHhC
Confidence 54554433 22 234688888776654
No 18
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.73 E-value=5.7e-17 Score=156.81 Aligned_cols=226 Identities=18% Similarity=0.166 Sum_probs=150.1
Q ss_pred cCcCcccCcHHHHHHHHHHHHH-hcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc----CCCEEEEeCchhhH
Q 009263 23 VKFSDVAGIDEAVEELQELVRY-LKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA----GVPFYQMAGSEFVE 97 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~-l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~----~~~~~~~~~~~~~~ 97 (539)
...+.++|.+..++.+.+++.. ++++. ..+.++||+||||||||++++++++.+ +..++.+++.....
T Consensus 13 y~p~~l~~Re~ei~~l~~~l~~~l~~~~-------~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 85 (276)
T d1fnna2 13 YVPKRLPHREQQLQQLDILLGNWLRNPG-------HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN 85 (276)
T ss_dssp CCCSCCTTCHHHHHHHHHHHHHHHHSTT-------SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhCCC-------CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhh
Confidence 3446789999998888888764 44442 467899999999999999999999987 35566666644322
Q ss_pred HH----------------hhhhhHH-HHHHHHHH-HhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHH
Q 009263 98 VL----------------VGVGSAR-IRDLFKRA-KVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQ 159 (539)
Q Consensus 98 ~~----------------~g~~~~~-~~~~f~~a-~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 159 (539)
.. .+..... ...+.... ....+.++++|++|.+.... ......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------------------~~~~~~ 146 (276)
T d1fnna2 86 FTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDI-------------------LSTFIR 146 (276)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHH-------------------HHHHHH
T ss_pred hhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhh-------------------hhhHHH
Confidence 10 0001111 22233322 23456788899999865432 111122
Q ss_pred HHHHhcCCCCCCcEEEEEecCCCC---cCCccccCCCccc-eeeecCCCCHHHHHHHHHHHhccCCCCCCCC---HHHHH
Q 009263 160 LLIELDGFDTGKGVIFLAATNRRD---LLDPALLRPGRFD-RKIRIRAPNAKGRTEILKIHASKVKMSDSVD---LSSYA 232 (539)
Q Consensus 160 ll~~ld~~~~~~~vivIaatn~~~---~ld~al~r~gRf~-~~i~v~~P~~~er~~il~~~l~~~~~~~~~~---~~~la 232 (539)
++..+.. .....+.+|++++... .+++.+.+ |+. ..|.|++|+.+++.+|++.++........++ ++.++
T Consensus 147 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia 223 (276)
T d1fnna2 147 LGQEADK-LGAFRIALVIVGHNDAVLNNLDPSTRG--IMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIA 223 (276)
T ss_dssp HTTCHHH-HSSCCEEEEEEESSTHHHHTSCHHHHH--HHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHH
T ss_pred HHhcccc-ccccceEEeecCCchhhhhhcchhhhh--hhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHH
Confidence 2221111 2334567777887643 57777776 543 4689999999999999998876533222222 44455
Q ss_pred hhC--------CCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhcC
Q 009263 233 KNL--------PGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVG 277 (539)
Q Consensus 233 ~~t--------~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~g 277 (539)
..+ .+-+++.+.++|+.|...|..+++..|+.+|+++|.+++..|
T Consensus 224 ~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~~g 276 (276)
T d1fnna2 224 DITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFG 276 (276)
T ss_dssp HHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHSCC
T ss_pred HHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHhCC
Confidence 432 122688999999999999999999999999999999998765
No 19
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.72 E-value=5.4e-17 Score=157.92 Aligned_cols=241 Identities=16% Similarity=0.061 Sum_probs=155.8
Q ss_pred cchhceecCCCCcCcCcccCcHHHHHHHHHHHH-HhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcC-----
Q 009263 11 YYFAMFSQGSTGVKFSDVAGIDEAVEELQELVR-YLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG----- 84 (539)
Q Consensus 11 ~~~~~~~~~~~~~~~~dv~G~~~~k~~L~~~v~-~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~----- 84 (539)
.+...+..++. .+.+.|.+...++|.+++. .+.+... ...++..++|+||||||||++++++++.+.
T Consensus 4 ~~~~~l~~~~~---P~~~~~Re~e~~~l~~~l~~~~~~~~~----~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~ 76 (287)
T d1w5sa2 4 KDRRVFDENYI---PPELRVRRGEAEALARIYLNRLLSGAG----LSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAK 76 (287)
T ss_dssp SCGGGGSTTCC---CSSCSSSCHHHHHHHHHHHHHHHTSSC----BCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred cChhhcCCccC---CCCCCCHHHHHHHHHHHHHHHHHcCCC----CCCcceEEEeECCCCCCHHHHHHHHHHHHHhhccc
Confidence 34444554543 4778899988888877653 3332210 011223467789999999999999999762
Q ss_pred ----CCEEEEeCchhhHHH----------------hhhhhHHHHHHHHH-HH-hCCCeEEEEeCcchhhhhhcCCcCCch
Q 009263 85 ----VPFYQMAGSEFVEVL----------------VGVGSARIRDLFKR-AK-VNKPSVIFIDEIDALATRRQGIFKDTT 142 (539)
Q Consensus 85 ----~~~~~~~~~~~~~~~----------------~g~~~~~~~~~f~~-a~-~~~p~Il~iDEiD~l~~~~~~~~~~~~ 142 (539)
..+.++++....... .+.....+...+.. .. ...+.++++||+|.+....+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~------ 150 (287)
T d1w5sa2 77 EGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRI------ 150 (287)
T ss_dssp TTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTS------
T ss_pred ccCCceeeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEecccccc------
Confidence 334455544432210 11122222223322 22 345668899999999765432
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCc------CCccccCCCccceeeecCCCCHHHHHHHHHHH
Q 009263 143 DHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDL------LDPALLRPGRFDRKIRIRAPNAKGRTEILKIH 216 (539)
Q Consensus 143 ~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~------ld~al~r~gRf~~~i~v~~P~~~er~~il~~~ 216 (539)
..+....+..+...+........+.+|+.+|.++. .++.+.+ ||...+.+++|+.++..+|++..
T Consensus 151 -------~~~~~~~l~~l~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~~~i~f~~y~~~el~~Il~~r 221 (287)
T d1w5sa2 151 -------AAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVES--QIGFKLHLPAYKSRELYTILEQR 221 (287)
T ss_dssp -------CHHHHHHHHTHHHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHT--TCSEEEECCCCCHHHHHHHHHHH
T ss_pred -------chhHHHHHHHHHHhcchhhcccceeEEeecccHHHHHHHHhhccchhc--ccceeeeccCCcHHHHHHHHhhh
Confidence 22223344455555555555666777777765543 3456666 88999999999999999999988
Q ss_pred hccCCCCCCCC---HHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHH
Q 009263 217 ASKVKMSDSVD---LSSYAKNLP-----GWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDR 273 (539)
Q Consensus 217 l~~~~~~~~~~---~~~la~~t~-----g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~ 273 (539)
++.......++ ++.+++.+. ...++.+.++++.|...|..++...|+.+|+++|+..
T Consensus 222 ~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 222 AELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHHhhccCCCCHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 76533333333 566666542 2268888899999999999999999999999999864
No 20
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.71 E-value=1.3e-19 Score=183.17 Aligned_cols=197 Identities=17% Similarity=0.084 Sum_probs=136.9
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHH-hhhhhHHHHHHHHHH------HhCCCeEEEEeCc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVL-VGVGSARIRDLFKRA------KVNKPSVIFIDEI 127 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~f~~a------~~~~p~Il~iDEi 127 (539)
|.+.++++||+||||||||++|+++|+.++.+|+.+++++..+.+ .+........+|..+ ....|+++++||+
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~Dei 229 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNL 229 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHH
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehH
Confidence 556677999999999999999999999999999999998876654 333333333333333 2234567777777
Q ss_pred chhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCC----CcEEEEEecCCCCcCCccccCCCccceeeecCC
Q 009263 128 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTG----KGVIFLAATNRRDLLDPALLRPGRFDRKIRIRA 203 (539)
Q Consensus 128 D~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~----~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~ 203 (539)
|.+.....+..... ++..... ....+|+|||. ++.++.+|+||+..+.+.+
T Consensus 230 D~l~~~~dg~~~~~----------------------~~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~ 284 (362)
T d1svma_ 230 DNLRDYLDGSVKVN----------------------LEKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRP 284 (362)
T ss_dssp HTTHHHHHCSSCEE----------------------ECCSSSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCC
T ss_pred hhcccccCCcchhh----------------------hhhhhhchhhhccCCceeeccc---ccccccccccCceEEeecC
Confidence 76654433211100 0000000 01136778994 5667778899999999998
Q ss_pred CCHHHHH-HHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhcCC
Q 009263 204 PNAKGRT-EILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTVGP 278 (539)
Q Consensus 204 P~~~er~-~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~g~ 278 (539)
|+...+. .++..++++..+. .+.+.++..+.+++++|+.++++.+...+.++....++...+.....++..|.
T Consensus 285 ~~~~~~~~~~l~~i~~~~~l~--~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk 358 (362)
T d1svma_ 285 KDYLKHCLERSEFLLEKRIIQ--SGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGI 358 (362)
T ss_dssp CHHHHHHHHTCTHHHHTTCTT--CHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTS
T ss_pred CCcHHHHHHHHHHHhcccCCC--CCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHcCC
Confidence 8877664 4555555555443 45677888888999999999999998888777777788888988888877663
No 21
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.70 E-value=5.4e-17 Score=155.88 Aligned_cols=191 Identities=18% Similarity=0.221 Sum_probs=120.2
Q ss_pred eecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCC---EEEEeC
Q 009263 16 FSQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP---FYQMAG 92 (539)
Q Consensus 16 ~~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~---~~~~~~ 92 (539)
|.+++.|.+|+|++|++++++.|..++. .. ..+.++||+||||||||++|+++|+++..+ ...++.
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~---~~--------~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~ 69 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSD---QP--------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDV 69 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTT---CT--------TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC-----
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHH---cC--------CCCCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccc
Confidence 6788999999999999999888875532 11 233469999999999999999999986211 111111
Q ss_pred chhhHH---------------------Hhhh-hhHHHHHHHHHH--------------HhCCCeEEEEeCcchhhhhhcC
Q 009263 93 SEFVEV---------------------LVGV-GSARIRDLFKRA--------------KVNKPSVIFIDEIDALATRRQG 136 (539)
Q Consensus 93 ~~~~~~---------------------~~g~-~~~~~~~~f~~a--------------~~~~p~Il~iDEiD~l~~~~~~ 136 (539)
..+... ..+. ............ ......+++|||+|.+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~--- 146 (252)
T d1sxje2 70 RQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKD--- 146 (252)
T ss_dssp -------------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHH---
T ss_pred ccccccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccc---
Confidence 100000 0000 000011111111 1123459999999987432
Q ss_pred CcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHH
Q 009263 137 IFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIH 216 (539)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~ 216 (539)
..+.++..++. ...++.+|++||.++.+++++++ |+ ..|+|++|+.++..+++...
T Consensus 147 -------------------~~~~l~~~~e~--~~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~l~~i 202 (252)
T d1sxje2 147 -------------------AQAALRRTMEK--YSKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCPAPSDSEISTILSDV 202 (252)
T ss_dssp -------------------HHHHHHHHHHH--STTTEEEEEEESCSCSSCHHHHT--TS-EEEECCCCCHHHHHHHHHHH
T ss_pred -------------------cchhhhccccc--ccccccceeeeccccchhhhhhc--ch-heeeecccchhhHHHHHHHH
Confidence 12334444432 34567888999999999999998 87 58999999999999999988
Q ss_pred hccCCCC--CCCCHHHHHhhCCCCCHHHHHHHHH
Q 009263 217 ASKVKMS--DSVDLSSYAKNLPGWTGARLAQLVQ 248 (539)
Q Consensus 217 l~~~~~~--~~~~~~~la~~t~g~s~~dl~~lv~ 248 (539)
+....+. .+.-++.++..+.| |++.+++
T Consensus 203 ~~~e~~~~~~~~~l~~i~~~s~G----d~R~ai~ 232 (252)
T d1sxje2 203 VTNERIQLETKDILKRIAQASNG----NLRVSLL 232 (252)
T ss_dssp HHHHTCEECCSHHHHHHHHHHTT----CHHHHHH
T ss_pred HHHcCCCCCcHHHHHHHHHHcCC----cHHHHHH
Confidence 8764432 22225777877766 4544443
No 22
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.63 E-value=1.3e-15 Score=146.45 Aligned_cols=219 Identities=20% Similarity=0.288 Sum_probs=148.6
Q ss_pred CcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc----------CCCEEEEeCc
Q 009263 24 KFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA----------GVPFYQMAGS 93 (539)
Q Consensus 24 ~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~----------~~~~~~~~~~ 93 (539)
+++.++|.++..++|.+++. . +..++++|+||||+|||.+++.+|... +..++.++..
T Consensus 16 ~ld~~igRd~Ei~~l~~iL~---r---------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~ 83 (268)
T d1r6bx2 16 GIDPLIGREKELERAIQVLC---R---------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 83 (268)
T ss_dssp CSCCCCSCHHHHHHHHHHHT---S---------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC
T ss_pred CCCcccChHHHHHHHHHHHh---c---------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeec
Confidence 57789999988777766542 1 234589999999999999999999864 5678999998
Q ss_pred hhhH--HHhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCC
Q 009263 94 EFVE--VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGK 171 (539)
Q Consensus 94 ~~~~--~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~ 171 (539)
.+.. .|.|..+.+++.++..+......|+||||++.|.+..++..+ ...+..+| ..+-.+.
T Consensus 84 ~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~--------------~~d~a~~L---kp~L~rg 146 (268)
T d1r6bx2 84 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG--------------QVDAANLI---KPLLSSG 146 (268)
T ss_dssp ---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSC--------------HHHHHHHH---SSCSSSC
T ss_pred hHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCc--------------cccHHHHh---hHHHhCC
Confidence 8885 578888999999999998888899999999999865432110 01122222 3333467
Q ss_pred cEEEEEecCCCC-----cCCccccCCCccceeeecCCCCHHHHHHHHHHHhccC------CCCCCC--CHHHHHhh--CC
Q 009263 172 GVIFLAATNRRD-----LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKV------KMSDSV--DLSSYAKN--LP 236 (539)
Q Consensus 172 ~vivIaatn~~~-----~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~------~~~~~~--~~~~la~~--t~ 236 (539)
.+.+|++|+..+ .-|++|.| ||. +|.++.|+.++-.+|+......+ .+.++. ..-.++.+ ..
T Consensus 147 ~i~vIgatT~eey~~~~e~d~al~r--rF~-~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~ 223 (268)
T d1r6bx2 147 KIRVIGSTTYQEFSNIFEKDRALAR--RFQ-KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 223 (268)
T ss_dssp CCEEEEEECHHHHHCCCCCTTSSGG--GEE-EEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTT
T ss_pred CCeEEEeCCHHHHHHHHhhcHHHHh--hhc-ccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccC
Confidence 889998887433 45899999 986 78899999999999997654332 222111 01222222 22
Q ss_pred CCCHHHHHHHHHHHHHHHHHh----CCCCCchhhHHHHHHHH
Q 009263 237 GWTGARLAQLVQEAALVAVRK----GHESILSSDMDDAVDRL 274 (539)
Q Consensus 237 g~s~~dl~~lv~~A~~~A~~~----~~~~I~~~d~~~a~~~~ 274 (539)
.+-|...-.++.+|+..+... ....|+.+|++..+.++
T Consensus 224 ~~~PdKAIdllDea~a~~~~~~~~~~~~~i~~~di~~~i~~~ 265 (268)
T d1r6bx2 224 RHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 265 (268)
T ss_dssp SCTTHHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhhccccCcccCCHHHHHHHHHHH
Confidence 233555556778887776543 23457777877777664
No 23
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.60 E-value=6.6e-15 Score=137.67 Aligned_cols=194 Identities=19% Similarity=0.245 Sum_probs=125.7
Q ss_pred CCcCcCcc-cC--cHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCch
Q 009263 21 TGVKFSDV-AG--IDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSE 94 (539)
Q Consensus 21 ~~~~~~dv-~G--~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~ 94 (539)
|..+|++. +| ...+...++++++ .+. ...+.++||||||||||+|++|+++++ +..+++++..+
T Consensus 5 ~~~tFdnF~vg~~N~~a~~~~~~~~~---~~~-------~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~ 74 (213)
T d1l8qa2 5 PKYTLENFIVGEGNRLAYEVVKEALE---NLG-------SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADD 74 (213)
T ss_dssp TTCCSSSCCCCTTTHHHHHHHHHHHH---TTT-------TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CCCChhhccCCCcHHHHHHHHHHHHh---CcC-------CCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHH
Confidence 67789995 45 3444455555443 221 122458999999999999999999987 67888999888
Q ss_pred hhHHHhhhhhHH-HHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcE
Q 009263 95 FVEVLVGVGSAR-IRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGV 173 (539)
Q Consensus 95 ~~~~~~g~~~~~-~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~v 173 (539)
+........... ....+.... ..++|+|||||.+.++.. .....-..+|.+ ......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~--~~dll~iDDi~~i~~~~~-------------~~~~lf~lin~~-------~~~~~~ 132 (213)
T d1l8qa2 75 FAQAMVEHLKKGTINEFRNMYK--SVDLLLLDDVQFLSGKER-------------TQIEFFHIFNTL-------YLLEKQ 132 (213)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH--TCSEEEEECGGGGTTCHH-------------HHHHHHHHHHHH-------HHTTCE
T ss_pred HHHHHHHHHHccchhhHHHHHh--hccchhhhhhhhhcCchH-------------HHHHHHHHHHHH-------hhccce
Confidence 876654432222 222332222 346999999999875431 112222233322 234556
Q ss_pred EEEEecCCCCcCC---ccccCCCccc--eeeecCCCCHHHHHHHHHHHhccCCCCCCCC-HHHHHhhCCCCCHHHHHHHH
Q 009263 174 IFLAATNRRDLLD---PALLRPGRFD--RKIRIRAPNAKGRTEILKIHASKVKMSDSVD-LSSYAKNLPGWTGARLAQLV 247 (539)
Q Consensus 174 ivIaatn~~~~ld---~al~r~gRf~--~~i~v~~P~~~er~~il~~~l~~~~~~~~~~-~~~la~~t~g~s~~dl~~lv 247 (539)
+|+++...|..++ +.|.+ |+. .++.++ |+.++|.++++.++...++.-+.+ ++.++..+. +.++|..++
T Consensus 133 iiits~~~p~~l~~~~~dL~S--RL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l 207 (213)
T d1l8qa2 133 IILASDRHPQKLDGVSDRLVS--RFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKI 207 (213)
T ss_dssp EEEEESSCGGGCTTSCHHHHH--HHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHH
T ss_pred EEEecCCcchhccccchHHHH--HhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHHH
Confidence 7777777776554 66776 554 467776 677899999999998776654333 677777763 689999888
Q ss_pred HHHH
Q 009263 248 QEAA 251 (539)
Q Consensus 248 ~~A~ 251 (539)
+...
T Consensus 208 ~~l~ 211 (213)
T d1l8qa2 208 KLIK 211 (213)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7654
No 24
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.57 E-value=1.1e-14 Score=145.82 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=137.3
Q ss_pred CCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcC----------------
Q 009263 21 TGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG---------------- 84 (539)
Q Consensus 21 ~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~---------------- 84 (539)
+...|.+|+|++.+|..|.-... .+ ...++||+||||||||++|++++.-+.
T Consensus 2 ~~~~f~~I~Gq~~~kral~laa~---~~---------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 2 PVFPFSAIVGQEDMKLALLLTAV---DP---------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHHH---CG---------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CCCChhhccCcHHHHHHHHHHHh---cc---------CCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccc
Confidence 34579999999999887653321 11 123799999999999999999998551
Q ss_pred -----------------CCEEEEeCchhhHHHhhhhh-HHH---------HHHHHHHHhCCCeEEEEeCcchhhhhhcCC
Q 009263 85 -----------------VPFYQMAGSEFVEVLVGVGS-ARI---------RDLFKRAKVNKPSVIFIDEIDALATRRQGI 137 (539)
Q Consensus 85 -----------------~~~~~~~~~~~~~~~~g~~~-~~~---------~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~ 137 (539)
.|++............|... ... ...+..| ...|+||||++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A---~~gvl~iDEi~~~~~----- 141 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARA---NRGYLYIDECNLLED----- 141 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHH---TTEEEEETTGGGSCH-----
T ss_pred cccchhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccc---cccEeecccHHHHHH-----
Confidence 12222222111111122100 000 0122222 235999999998653
Q ss_pred cCCchhhhhhhhhhHHHHHHHHHHHHhcCC-----------CCCCcEEEEEecCCCC-cCCccccCCCccceeeecCCC-
Q 009263 138 FKDTTDHLYNAATQERETTLNQLLIELDGF-----------DTGKGVIFLAATNRRD-LLDPALLRPGRFDRKIRIRAP- 204 (539)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~-----------~~~~~vivIaatn~~~-~ld~al~r~gRf~~~i~v~~P- 204 (539)
.+++.|++.|+.- .-+..+++++|+|..+ .+++++++ ||+..+.++.|
T Consensus 142 -----------------~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD--Rf~~~i~v~~~~ 202 (333)
T d1g8pa_ 142 -----------------HIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD--RFGLSVEVLSPR 202 (333)
T ss_dssp -----------------HHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--TCSEEEECCCCC
T ss_pred -----------------HHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--hhcceeeccCcc
Confidence 3556777776521 1134588899999754 68999999 99999999877
Q ss_pred CHHHHHHHHHHHh-------------------------------ccCCCCCC--CCHHHHHhhCCCCCHHHHHHHHHHHH
Q 009263 205 NAKGRTEILKIHA-------------------------------SKVKMSDS--VDLSSYAKNLPGWTGARLAQLVQEAA 251 (539)
Q Consensus 205 ~~~er~~il~~~l-------------------------------~~~~~~~~--~~~~~la~~t~g~s~~dl~~lv~~A~ 251 (539)
+...+.++..... .+.....+ ..+..........|.+....+++-|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvAr 282 (333)
T d1g8pa_ 203 DVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSAR 282 (333)
T ss_dssp SHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 4444444432211 11111100 01223333445568899999999999
Q ss_pred HHHHHhCCCCCchhhHHHHHHHHhcC
Q 009263 252 LVAVRKGHESILSSDMDDAVDRLTVG 277 (539)
Q Consensus 252 ~~A~~~~~~~I~~~d~~~a~~~~~~g 277 (539)
..|..++++.|+.+|+.+|+.-+...
T Consensus 283 tiA~L~gr~~V~~~di~~a~~lvL~h 308 (333)
T d1g8pa_ 283 ALAALEGATAVGRDHLKRVATMALSH 308 (333)
T ss_dssp HHHHHTTCSBCCHHHHHHHHHHHHGG
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999998776553
No 25
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.53 E-value=6.6e-15 Score=133.92 Aligned_cols=158 Identities=22% Similarity=0.351 Sum_probs=113.2
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc----------CCCEEEEeC
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA----------GVPFYQMAG 92 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~----------~~~~~~~~~ 92 (539)
-.++.++|.++..+++.+++. . +...+++|+||||+|||.+++.+|... +..++.++.
T Consensus 19 g~ld~~igRd~Ei~~l~~iL~---r---------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~ 86 (195)
T d1jbka_ 19 GKLDPVIGRDEEIRRTIQVLQ---R---------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86 (195)
T ss_dssp TCSCCCCSCHHHHHHHHHHHT---S---------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH
T ss_pred CCCCCCcCcHHHHHHHHHHHh---c---------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 357889999988777766543 2 233479999999999999999999855 577999999
Q ss_pred chhhH--HHhhhhhHHHHHHHHHHHhCC-CeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCC
Q 009263 93 SEFVE--VLVGVGSARIRDLFKRAKVNK-PSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDT 169 (539)
Q Consensus 93 ~~~~~--~~~g~~~~~~~~~f~~a~~~~-p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~ 169 (539)
+.+.. .|.|..+.++..++..+.... ..||||||++.+.+...+. +. ......+...|.
T Consensus 87 ~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~-g~----------~d~~~~Lkp~L~------- 148 (195)
T d1jbka_ 87 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GA----------MDAGNMLKPALA------- 148 (195)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT-------C----------CCCHHHHHHHHH-------
T ss_pred HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCC-Cc----------ccHHHHHHHHHh-------
Confidence 98885 367788889999998876554 6799999999997654321 00 001122333332
Q ss_pred CCcEEEEEecCCCC-----cCCccccCCCccceeeecCCCCHHHHHHHH
Q 009263 170 GKGVIFLAATNRRD-----LLDPALLRPGRFDRKIRIRAPNAKGRTEIL 213 (539)
Q Consensus 170 ~~~vivIaatn~~~-----~ld~al~r~gRf~~~i~v~~P~~~er~~il 213 (539)
+..+.+|++|...+ .-|++|.| ||. .|.+..|+.++-..|+
T Consensus 149 rg~l~~IgatT~eey~~~~e~d~aL~r--rF~-~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 149 RGELHCVGATTLDEYRQYIEKDAALER--RFQ-KVFVAEPSVEDTIAIL 194 (195)
T ss_dssp TTSCCEEEEECHHHHHHHTTTCHHHHT--TEE-EEECCCCCHHHHHTTC
T ss_pred CCCceEEecCCHHHHHHHHHcCHHHHh--cCC-EeecCCCCHHHHHHHh
Confidence 35678888877433 45899999 996 7789999998877665
No 26
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.51 E-value=5.7e-14 Score=139.13 Aligned_cols=164 Identities=24% Similarity=0.340 Sum_probs=111.4
Q ss_pred CcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH-------
Q 009263 26 SDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV------- 98 (539)
Q Consensus 26 ~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~------- 98 (539)
..|+|++++++.+...+......- .. .-+|...+||+||||+|||.||+++|..++.||+.+++++|.+.
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l--~~-~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l~ 98 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGL--GH-EHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 98 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTC--SC-TTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSC
T ss_pred CeecChHHHHHHHHHHHHHHHccC--CC-CCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhhc
Confidence 468999999999988776422110 00 01233468999999999999999999999999999999988643
Q ss_pred -----HhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcC------C
Q 009263 99 -----LVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDG------F 167 (539)
Q Consensus 99 -----~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~------~ 167 (539)
|.|..... .+.........+|+++||+|...+ .+++.||+.++. .
T Consensus 99 g~~~gy~g~~~~~--~l~~~~~~~~~~vvl~DeieKa~~----------------------~V~~~lLqild~G~ltd~~ 154 (315)
T d1r6bx3 99 GAPPGYVGFDQGG--LLTDAVIKHPHAVLLLDEIEKAHP----------------------DVFNILLQVMDNGTLTDNN 154 (315)
T ss_dssp CCCSCSHHHHHTT--HHHHHHHHCSSEEEEEETGGGSCH----------------------HHHHHHHHHHHHSEEEETT
T ss_pred ccCCCccccccCC--hhhHHHHhCccchhhhcccccccc----------------------hHhhhhHHhhccceecCCC
Confidence 22222211 133334456778999999998543 234455555531 1
Q ss_pred ---CCCCcEEEEEecCCCC-------------------------cCCccccCCCccceeeecCCCCHHHHHHHHHHHhc
Q 009263 168 ---DTGKGVIFLAATNRRD-------------------------LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHAS 218 (539)
Q Consensus 168 ---~~~~~vivIaatn~~~-------------------------~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~ 218 (539)
....+.++|+|+|.-. .+.|.++. |++.++.|.+.+.++..+|+...+.
T Consensus 155 Gr~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~ii~f~~l~~~~~~~I~~~~l~ 231 (315)
T d1r6bx3 155 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN--RLDNIIWFDHLSTDVIHQVVDKFIV 231 (315)
T ss_dssp TEEEECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHH
T ss_pred CCccCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHh--hhhhhhcccchhhhHHHHHHHHHHH
Confidence 1245688889998421 25566666 8888888888888888877765543
No 27
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.48 E-value=3.5e-14 Score=143.69 Aligned_cols=201 Identities=20% Similarity=0.312 Sum_probs=122.2
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc----------CCCEEEEeC
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA----------GVPFYQMAG 92 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~----------~~~~~~~~~ 92 (539)
=+++.++|.++..+++.+++.. +...+++|+||||+|||.+++.+|... +..++.++.
T Consensus 19 g~ld~~~gr~~ei~~~~~~L~r------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~ 86 (387)
T d1qvra2 19 GKLDPVIGRDEEIRRVIQILLR------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQM 86 (387)
T ss_dssp TCSCCCCSCHHHHHHHHHHHHC------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC
T ss_pred CCCCCCcCcHHHHHHHHHHHhc------------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 3578899999987777766541 234468999999999999999999854 456899999
Q ss_pred chhhH--HHhhhhhHHHHHHHHHHHhCC-CeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCC
Q 009263 93 SEFVE--VLVGVGSARIRDLFKRAKVNK-PSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDT 169 (539)
Q Consensus 93 ~~~~~--~~~g~~~~~~~~~f~~a~~~~-p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~ 169 (539)
..+.. .|.|..+.++..++..+.... +.||||||++.+.+...+. ........+...| .
T Consensus 87 ~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~-----------g~~d~a~~Lkp~L-------~ 148 (387)
T d1qvra2 87 GSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAE-----------GAVDAGNMLKPAL-------A 148 (387)
T ss_dssp -----------CHHHHHHHHHHHHHTTCSSEEEEECCC------------------------------HHHH-------H
T ss_pred hhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCC-----------CcccHHHHHHHHH-------h
Confidence 99886 467888899999998887764 6789999999997653221 0001112222332 2
Q ss_pred CCcEEEEEecCCCC----cCCccccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCC--C---HHH---HHhh--C
Q 009263 170 GKGVIFLAATNRRD----LLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSV--D---LSS---YAKN--L 235 (539)
Q Consensus 170 ~~~vivIaatn~~~----~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~--~---~~~---la~~--t 235 (539)
+..+-+|++|...+ .-|++|.| ||. .|.++.|+.++-..|++.....+.....+ . +.. ++.+ .
T Consensus 149 rg~~~~I~~tT~~ey~~~e~d~al~r--rF~-~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~ 225 (387)
T d1qvra2 149 RGELRLIGATTLDEYREIEKDPALER--RFQ-PVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYIT 225 (387)
T ss_dssp TTCCCEEEEECHHHHHHHTTCTTTCS--CCC-CEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCC
T ss_pred CCCcceeeecCHHHHHHhcccHHHHH--hcc-cccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccc
Confidence 35678888876322 24899999 996 77899999999999998765543211111 1 222 2221 2
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 009263 236 PGWTGARLAQLVQEAALVAVR 256 (539)
Q Consensus 236 ~g~s~~dl~~lv~~A~~~A~~ 256 (539)
..+-|.....++.+|+.....
T Consensus 226 ~r~~PdKAidlld~a~a~~~i 246 (387)
T d1qvra2 226 ERRLPDKAIDLIDEAAARLRM 246 (387)
T ss_dssp SSCTHHHHHHHHHHHHHHHHH
T ss_pred cccChhhHHHHHHHHHHHHHh
Confidence 334566666677776665543
No 28
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.44 E-value=2.8e-13 Score=133.85 Aligned_cols=164 Identities=26% Similarity=0.349 Sum_probs=110.8
Q ss_pred CcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHH----
Q 009263 26 SDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEV---- 98 (539)
Q Consensus 26 ~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~---- 98 (539)
+.|+|++++++.+.+.+......-. -..+|...+||+||+|+|||.+|+.+|..+ +.+++.++++++.+.
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~~~~l~---~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~~ 99 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRARAGLK---DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVS 99 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHHGGGCS---CSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGGG
T ss_pred CeEeCHHHHHHHHHHHHHHHhcCCC---CCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhhh
Confidence 3589999999999887764321100 001233357889999999999999999998 789999999887642
Q ss_pred --------HhhhhhHHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCC---
Q 009263 99 --------LVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGF--- 167 (539)
Q Consensus 99 --------~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~--- 167 (539)
|+|... -..+....+.+..|||++||||.... ..++.|+..++.-
T Consensus 100 ~L~g~~~gyvG~~~--~~~l~~~~~~~p~~Vvl~DEieK~~~----------------------~v~~~ll~~l~~g~~~ 155 (315)
T d1qvra3 100 RLIGAPPGYVGYEE--GGQLTEAVRRRPYSVILFDEIEKAHP----------------------DVFNILLQILDDGRLT 155 (315)
T ss_dssp GC----------------CHHHHHHHCSSEEEEESSGGGSCH----------------------HHHHHHHHHHTTTEEC
T ss_pred hhcCCCCCCcCccc--CChHHHHHHhCCCcEEEEehHhhcCH----------------------HHHHHHHHHhccCcee
Confidence 233211 11233444456669999999998542 2344555555421
Q ss_pred ------CCCCcEEEEEecCC--------------------------CCcCCccccCCCccceeeecCCCCHHHHHHHHHH
Q 009263 168 ------DTGKGVIFLAATNR--------------------------RDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKI 215 (539)
Q Consensus 168 ------~~~~~vivIaatn~--------------------------~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~ 215 (539)
....+.++|+|||- .+.+.|.++. ||+.++.|.+.+.++..+|+..
T Consensus 156 ~~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~Ii~F~~L~~~~~~~I~~~ 233 (315)
T d1qvra3 156 DSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLN--RLDEIVVFRPLTKEQIRQIVEI 233 (315)
T ss_dssp CSSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHH--TCSBCCBCCCCCHHHHHHHHHH
T ss_pred CCCCcEecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHh--cCCeeeeccchhhhhhHHHHHH
Confidence 12356899999994 2347778887 8999999999999888888876
Q ss_pred Hhc
Q 009263 216 HAS 218 (539)
Q Consensus 216 ~l~ 218 (539)
.+.
T Consensus 234 ~l~ 236 (315)
T d1qvra3 234 QLS 236 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 29
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.40 E-value=1.9e-12 Score=120.14 Aligned_cols=154 Identities=18% Similarity=0.251 Sum_probs=104.3
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCC------------------------CEEEEeCchhhHHHhhhhhHHHHHHHH
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGV------------------------PFYQMAGSEFVEVLVGVGSARIRDLFK 112 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~------------------------~~~~~~~~~~~~~~~g~~~~~~~~~f~ 112 (539)
+.|.++||+||||+|||++|+.+|+.+.. .++.+....-. .......++++..
T Consensus 22 ~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~i~~~~ir~l~~ 98 (207)
T d1a5ta2 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK---NTLGVDAVREVTE 98 (207)
T ss_dssp CCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTC---SSBCHHHHHHHHH
T ss_pred CcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcc---cccccchhhHHhh
Confidence 46778999999999999999999997631 11222111100 0012234555555
Q ss_pred HHH----hCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCCcc
Q 009263 113 RAK----VNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPA 188 (539)
Q Consensus 113 ~a~----~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld~a 188 (539)
.+. .....|++|||+|.+.. ...+.|+..|+. ++.++++|.+||.++.+.++
T Consensus 99 ~~~~~~~~~~~kviIide~d~l~~----------------------~a~n~Llk~lEe--p~~~~~fIl~t~~~~~ll~t 154 (207)
T d1a5ta2 99 KLNEHARLGGAKVVWVTDAALLTD----------------------AAANALLKTLEE--PPAETWFFLATREPERLLAT 154 (207)
T ss_dssp HTTSCCTTSSCEEEEESCGGGBCH----------------------HHHHHHHHHHTS--CCTTEEEEEEESCGGGSCHH
T ss_pred hhhhccccCccceEEechhhhhhh----------------------hhhHHHHHHHHh--hcccceeeeeecChhhhhhh
Confidence 543 23456999999999753 345678888873 55788999999999999999
Q ss_pred ccCCCccceeeecCCCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHH
Q 009263 189 LLRPGRFDRKIRIRAPNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQ 245 (539)
Q Consensus 189 l~r~gRf~~~i~v~~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~ 245 (539)
+++ |+ ..+.|++|+.++...+++... .+ ++..+..+++.+.| ++++.-+
T Consensus 155 I~S--Rc-~~i~~~~~~~~~~~~~L~~~~---~~-~~~~~~~i~~~s~G-s~r~al~ 203 (207)
T d1a5ta2 155 LRS--RC-RLHYLAPPPEQYAVTWLSREV---TM-SQDALLAALRLSAG-SPGAALA 203 (207)
T ss_dssp HHT--TS-EEEECCCCCHHHHHHHHHHHC---CC-CHHHHHHHHHHTTT-CHHHHHH
T ss_pred hcc--ee-EEEecCCCCHHHHHHHHHHcC---CC-CHHHHHHHHHHcCC-CHHHHHH
Confidence 998 85 789999999998888776432 22 22236667777766 5555444
No 30
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.37 E-value=1.1e-12 Score=132.02 Aligned_cols=179 Identities=22% Similarity=0.284 Sum_probs=108.5
Q ss_pred CcccCcHHHHHHHHHHHHH----hcChhhhhh--------------cCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCE
Q 009263 26 SDVAGIDEAVEELQELVRY----LKNPELFDK--------------MGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPF 87 (539)
Q Consensus 26 ~dv~G~~~~k~~L~~~v~~----l~~~~~~~~--------------~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~ 87 (539)
.-|+||+++|+.+...+.. .+.+..... -.-.++.++|+.||+|||||.+||++|..++.||
T Consensus 17 ~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~ 96 (364)
T d1um8a_ 17 NYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPI 96 (364)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCE
T ss_pred CeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhcccce
Confidence 4589999999998876631 111111110 0135788899999999999999999999999999
Q ss_pred EEEeCchhhHH-Hhhhh-hHHHHHHHHHH----HhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHH
Q 009263 88 YQMAGSEFVEV-LVGVG-SARIRDLFKRA----KVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLL 161 (539)
Q Consensus 88 ~~~~~~~~~~~-~~g~~-~~~~~~~f~~a----~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll 161 (539)
+.++++.|.+. |+|.. ...+.+++..+ +....+||++||+|...+........ .......+.+.||
T Consensus 97 ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~--------~d~a~~~V~~~lL 168 (364)
T d1um8a_ 97 AISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSIT--------RDVSGEGVQQALL 168 (364)
T ss_dssp EEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC----------------------CHHHHHHHH
T ss_pred eehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhcccccccccc--------ccccchHHHHhhh
Confidence 99999998864 44432 23345555433 33456799999999987653221111 1122345677777
Q ss_pred HHhcCCC-----------CCCcEEEEEecCC-------------------------------------------------
Q 009263 162 IELDGFD-----------TGKGVIFLAATNR------------------------------------------------- 181 (539)
Q Consensus 162 ~~ld~~~-----------~~~~vivIaatn~------------------------------------------------- 181 (539)
+.+++-. ...+.+++.|+|-
T Consensus 169 qild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T d1um8a_ 169 KIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLV 248 (364)
T ss_dssp HHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHH
T ss_pred hhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHh
Confidence 7777411 1123445555553
Q ss_pred CCcCCccccCCCccceeeecCCCCHHHHHHHHH
Q 009263 182 RDLLDPALLRPGRFDRKIRIRAPNAKGRTEILK 214 (539)
Q Consensus 182 ~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~ 214 (539)
+..+.|.|+- |++.++.|.+.+.++..+|+.
T Consensus 249 ~~~f~PEf~g--Ri~~iv~f~~L~~~~l~~Il~ 279 (364)
T d1um8a_ 249 TYGLIPELIG--RLPVLSTLDSISLEAMVDILQ 279 (364)
T ss_dssp HTTCCHHHHT--TCCEEEECCCCCHHHHHHHHH
T ss_pred hhhhHHHHHH--HhcchhhHhhhhHHHHHHHHH
Confidence 0124455554 999999999999999999885
No 31
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.19 E-value=9.3e-11 Score=120.47 Aligned_cols=70 Identities=29% Similarity=0.498 Sum_probs=54.4
Q ss_pred cccCcHHHHHHHHHHHHH----hcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 27 DVAGIDEAVEELQELVRY----LKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 27 dv~G~~~~k~~L~~~v~~----l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
-|+|++++|+.|.-.+.. +..+...+ .--.|++|||.||||||||.||++||+.+++||+.++++.|.+.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~--~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTea 88 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLR--HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEV 88 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTT--TTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC--
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccc--cccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeec
Confidence 489999999999877642 22222211 12357799999999999999999999999999999999988753
No 32
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.12 E-value=2.3e-12 Score=124.11 Aligned_cols=68 Identities=29% Similarity=0.426 Sum_probs=53.5
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
++|+|.-+.+...+.+.++....+ +...|+++||+||||||||++|+++|++++.+|+.++++++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQGKK--------AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTCC--------CCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred cccChHHHHHHHHHHHHHHHhccc--------CCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHH
Confidence 567776666666666655544322 34678999999999999999999999999999999999887643
No 33
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.04 E-value=7.6e-10 Score=105.00 Aligned_cols=204 Identities=21% Similarity=0.268 Sum_probs=114.2
Q ss_pred cccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHHHh---
Q 009263 27 DVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEVLV--- 100 (539)
Q Consensus 27 dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~~~--- 100 (539)
+.||.++..+++.+-+..+.. ....|||+||+|||||++|+++.... ..+++.+++..+.....
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~----------~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~ 70 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISC----------AECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTT----------CCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHhC----------CCCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHH
Confidence 457888887777766554332 23469999999999999999998765 56789999876644321
Q ss_pred --hhhh-------HHHHHHHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhc-----C
Q 009263 101 --GVGS-------ARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELD-----G 166 (539)
Q Consensus 101 --g~~~-------~~~~~~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld-----~ 166 (539)
|... .....+|+.| ....|||||||.+.... +..+..++..-. +
T Consensus 71 lfg~~~~~~~~~~~~~~g~l~~a---~gGtL~l~~i~~L~~~~-------------------Q~~L~~~l~~~~~~~~~~ 128 (247)
T d1ny5a2 71 LFGYEKGAFTGAVSSKEGFFELA---DGGTLFLDEIGELSLEA-------------------QAKLLRVIESGKFYRLGG 128 (247)
T ss_dssp HHCBCTTSSTTCCSCBCCHHHHT---TTSEEEEESGGGCCHHH-------------------HHHHHHHHHHSEECCBTC
T ss_pred hcCcccCCcCCcccccCCHHHcc---CCCEEEEeChHhCCHHH-------------------HHHHHHHHHhCCEEECCC
Confidence 1000 0012234443 33489999999985432 223334443211 1
Q ss_pred C-CCCCcEEEEEecCCCC-------cCCccccCCCccceeeecCCCCHHHHH----HHHHHHhcc----CCCC-CCCC--
Q 009263 167 F-DTGKGVIFLAATNRRD-------LLDPALLRPGRFDRKIRIRAPNAKGRT----EILKIHASK----VKMS-DSVD-- 227 (539)
Q Consensus 167 ~-~~~~~vivIaatn~~~-------~ld~al~r~gRf~~~i~v~~P~~~er~----~il~~~l~~----~~~~-~~~~-- 227 (539)
. ....++.+|++|+.+- .+++.|.. |+. .+.+..|+..+|. .|+.+++.. .... ..++
T Consensus 129 ~~~~~~~~RlI~~s~~~l~~l~~~~~f~~~L~~--~l~-~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~ 205 (247)
T d1ny5a2 129 RKEIEVNVRILAATNRNIKELVKEGKFREDLYY--RLG-VIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKS 205 (247)
T ss_dssp CSBEECCCEEEEEESSCHHHHHHTTSSCHHHHH--HHT-TEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHH
T ss_pred CCceecCeEEEEecCCCHHHHHHcCCCcHHHHh--hcC-eeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHH
Confidence 1 1112466777777532 13333333 332 3345566666654 344555443 2221 1122
Q ss_pred -HHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHH
Q 009263 228 -LSSYAKNL-PGWTGARLAQLVQEAALVAVRKGHESILSSDMDD 269 (539)
Q Consensus 228 -~~~la~~t-~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~ 269 (539)
+..|.... +| +-++|++++++|...+ ....|+.+|+..
T Consensus 206 al~~L~~~~WPG-Nl~EL~~~l~~a~~~~---~~~~I~~~dl~~ 245 (247)
T d1ny5a2 206 AQELLLSYPWYG-NVRELKNVIERAVLFS---EGKFIDRGELSC 245 (247)
T ss_dssp HHHHHHHSCCTT-HHHHHHHHHHHHHHHC---CSSEECHHHHHH
T ss_pred HHHHHHhCCCCC-HHHHHHHHHHHHHHhC---CCCeECHHHccc
Confidence 33333332 34 4567888888776444 456788888754
No 34
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.96 E-value=2.4e-08 Score=95.08 Aligned_cols=190 Identities=16% Similarity=0.164 Sum_probs=117.3
Q ss_pred CCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH-
Q 009263 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV- 98 (539)
Q Consensus 20 ~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~- 98 (539)
.|..+-++++|.++..++|.+. .++.++|+||+|+|||+|++.++...+.++..+++..+...
T Consensus 6 ~p~~~~~~f~GR~~el~~l~~~----------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~ 69 (283)
T d2fnaa2 6 SPKDNRKDFFDREKEIEKLKGL----------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERN 69 (283)
T ss_dssp SCCCSGGGSCCCHHHHHHHHHT----------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCS
T ss_pred CCCCChhhCCChHHHHHHHHhc----------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccccc
Confidence 3555679999999987777531 23579999999999999999999999999888876443211
Q ss_pred ------Hh---hh------------------------------------hhHHHHHHHHHH--HhCCCeEEEEeCcchhh
Q 009263 99 ------LV---GV------------------------------------GSARIRDLFKRA--KVNKPSVIFIDEIDALA 131 (539)
Q Consensus 99 ------~~---g~------------------------------------~~~~~~~~f~~a--~~~~p~Il~iDEiD~l~ 131 (539)
+. .. ....+..+++.. ....+.++++||++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~ 149 (283)
T d2fnaa2 70 YISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELV 149 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGG
T ss_pred cccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhc
Confidence 00 00 000122233332 22467799999999986
Q ss_pred hhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCC---c------CCccccCCCccceeeecC
Q 009263 132 TRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD---L------LDPALLRPGRFDRKIRIR 202 (539)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~---~------ld~al~r~gRf~~~i~v~ 202 (539)
..... .....+..+... ...+..+.+..... . ....+. +|+...+.++
T Consensus 150 ~~~~~---------------~~~~~l~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~L~ 206 (283)
T d2fnaa2 150 KLRGV---------------NLLPALAYAYDN------LKRIKFIMSGSEMGLLYDYLRVEDPESPLF--GRAFSTVELK 206 (283)
T ss_dssp GCTTC---------------CCHHHHHHHHHH------CTTEEEEEEESSHHHHHHHTTTTCTTSTTT--TCCCEEEEEC
T ss_pred ccchH---------------HHHHHHHHHHHh------hhhhhhhhccccchHHHHHHHhhhhcchhc--ccceeEEeeC
Confidence 54321 111122222221 12333333322111 1 111122 3666789999
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCCCHHHHHhhCCCCCHHHHHHHHHHH
Q 009263 203 APNAKGRTEILKIHASKVKMSDSVDLSSYAKNLPGWTGARLAQLVQEA 250 (539)
Q Consensus 203 ~P~~~er~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~dl~~lv~~A 250 (539)
+.+.++..+++...+....+..+ +++.+.+.+.| .|..|..++..+
T Consensus 207 ~l~~~e~~~~l~~~~~~~~~~~~-~~~~i~~~~~G-~P~~L~~~~~~~ 252 (283)
T d2fnaa2 207 PFSREEAIEFLRRGFQEADIDFK-DYEVVYEKIGG-IPGWLTYFGFIY 252 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCC-CHHHHHHHHCS-CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhhhhcCCCHH-HHHHHHHHhCC-CHHHHHHHHHHH
Confidence 99999999999988876665543 47888888888 587877776544
No 35
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.95 E-value=1.3e-09 Score=99.67 Aligned_cols=117 Identities=13% Similarity=0.208 Sum_probs=86.4
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcC------CCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhC----CCeEEEEeCc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAG------VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVN----KPSVIFIDEI 127 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~----~p~Il~iDEi 127 (539)
.+.++||+||||+|||++|..+++... ..++.+....- .-+...+|.+...+... ...|++|||+
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~-----~I~Id~IR~i~~~~~~~~~~~~~KviIId~a 88 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGE-----NIGIDDIRTIKDFLNYSPELYTRKYVIVHDC 88 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSS-----CBCHHHHHHHHHHHTSCCSSSSSEEEEETTG
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcC-----CCCHHHHHHHHHHHhhCcccCCCEEEEEeCc
Confidence 456899999999999999999999763 23677765321 11345677776665432 3359999999
Q ss_pred chhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCH
Q 009263 128 DALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNA 206 (539)
Q Consensus 128 D~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~ 206 (539)
|.+.. ...|.||..|+ +++.+.++|.+|+.++.+.|.+++ |+ ..+.++.|..
T Consensus 89 d~l~~----------------------~aqNaLLK~LE--EPp~~t~fiLit~~~~~ll~TI~S--RC-~~i~~~~p~~ 140 (198)
T d2gnoa2 89 ERMTQ----------------------QAANAFLKALE--EPPEYAVIVLNTRRWHYLLPTIKS--RV-FRVVVNVPKE 140 (198)
T ss_dssp GGBCH----------------------HHHHHTHHHHH--SCCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCHH
T ss_pred cccch----------------------hhhhHHHHHHh--CCCCCceeeeccCChhhCHHHHhc--ce-EEEeCCCchH
Confidence 99753 34567888887 456778888899999999999999 74 5778877753
No 36
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.50 E-value=4.2e-07 Score=80.47 Aligned_cols=26 Identities=35% Similarity=0.641 Sum_probs=22.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
.++|.||||+|||||++++++.+..+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~ 27 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKR 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCC
Confidence 37999999999999999999977543
No 37
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.19 E-value=1.5e-05 Score=75.93 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=37.4
Q ss_pred CcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 26 SDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 26 ~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+++|.+..++++.+.+...... ....+.|+|+.|+|||+||+.++++.
T Consensus 20 ~~~~gR~~~~~~i~~~L~~~~~~---------~~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 20 MTCYIREYHVDRVIKKLDEMCDL---------DSFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTTS---------SSEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CceeCcHHHHHHHHHHHHhccCC---------CceEEEEECCCCCCHHHHHHHHHHhh
Confidence 45789999888877766543332 23357899999999999999998864
No 38
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.00 E-value=3.3e-06 Score=72.84 Aligned_cols=31 Identities=29% Similarity=0.685 Sum_probs=28.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
+.|+|.|||||||||+|+.||.+++.|++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~ 33 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS 33 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 4789999999999999999999999998743
No 39
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.98 E-value=6.1e-06 Score=72.29 Aligned_cols=39 Identities=33% Similarity=0.552 Sum_probs=34.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
++-|+|.|||||||||+|++++++++.+++.++...+..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~~~ 42 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWG 42 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHHHH
Confidence 345889999999999999999999999999998876654
No 40
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.97 E-value=1.5e-06 Score=76.76 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=33.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
++.|+|.|||||||||||++||+.++.+++......+..
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~ 45 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVF 45 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhh
Confidence 567999999999999999999999999988766555443
No 41
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.89 E-value=9.1e-06 Score=70.82 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=28.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
++|+|.|+||+|||++++.+|..++.+|+..
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 3689999999999999999999999999865
No 42
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.78 E-value=9.4e-06 Score=70.95 Aligned_cols=39 Identities=15% Similarity=0.371 Sum_probs=33.1
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
++-|+|+||||+||||+|++|++.++.+++.++...+..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d~~~~ 41 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIE 41 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecchhhc
Confidence 356899999999999999999999999998887654433
No 43
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.78 E-value=6.2e-06 Score=71.94 Aligned_cols=29 Identities=38% Similarity=0.800 Sum_probs=26.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
.|+|.|||||||||+|+.||..++.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 57899999999999999999999999875
No 44
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.75 E-value=0.00013 Score=67.17 Aligned_cols=78 Identities=26% Similarity=0.230 Sum_probs=52.1
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHHHh----------------------------hhh
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEVLV----------------------------GVG 103 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~~~----------------------------g~~ 103 (539)
|+.++.-++|+||||+|||+++..+|..+ +.++++++..+-...+. ...
T Consensus 22 Gi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (242)
T d1tf7a2 22 GFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGL 101 (242)
T ss_dssp SEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCH
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhH
Confidence 45666779999999999999999998876 56677776532221100 001
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeCcchhhh
Q 009263 104 SARIRDLFKRAKVNKPSVIFIDEIDALAT 132 (539)
Q Consensus 104 ~~~~~~~f~~a~~~~p~Il~iDEiD~l~~ 132 (539)
...+..+........|.+++||.++.+..
T Consensus 102 ~~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 102 EDHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred HHHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 12233344445667889999999998764
No 45
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.66 E-value=1.2e-05 Score=70.52 Aligned_cols=31 Identities=29% Similarity=0.604 Sum_probs=28.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
+.|+|.|+||+||||+++.+|..+|.||+..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4688999999999999999999999998853
No 46
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.66 E-value=2.4e-05 Score=68.21 Aligned_cols=29 Identities=31% Similarity=0.597 Sum_probs=26.1
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
++|.|+||+||||+++.+|..++.||+..
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 56669999999999999999999998854
No 47
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.60 E-value=0.00024 Score=64.11 Aligned_cols=74 Identities=27% Similarity=0.343 Sum_probs=49.2
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHH-------H---h----------hhhhHHHHHHHHH
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEV-------L---V----------GVGSARIRDLFKR 113 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~-------~---~----------g~~~~~~~~~f~~ 113 (539)
..|.-++|+||+|+||||.+--+|..+ +..+..+++..+... | . ......+++....
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~ 86 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQA 86 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHH
Confidence 456778999999999999888888655 667777776655432 1 0 0112234455555
Q ss_pred HHhCCCeEEEEeCcchh
Q 009263 114 AKVNKPSVIFIDEIDAL 130 (539)
Q Consensus 114 a~~~~p~Il~iDEiD~l 130 (539)
++....++|+||=..+.
T Consensus 87 a~~~~~d~ilIDTaGr~ 103 (211)
T d2qy9a2 87 AKARNIDVLIADTAGRL 103 (211)
T ss_dssp HHHTTCSEEEECCCCCG
T ss_pred HHHcCCCEEEeccCCCc
Confidence 66667789999876554
No 48
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.58 E-value=2.2e-05 Score=68.39 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=28.4
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
.++-++|+|||||||||+|+.|++.++.+++..
T Consensus 5 ~~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~ 37 (171)
T d1knqa_ 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDG 37 (171)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHHTCEEEEG
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCeech
Confidence 345688999999999999999999999877654
No 49
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.55 E-value=0.00011 Score=68.71 Aligned_cols=28 Identities=25% Similarity=0.259 Sum_probs=23.6
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
++++.-+.|.||+|+|||||++.+++..
T Consensus 41 i~~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 41 IEKGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp ECTTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHHhcC
Confidence 4455669999999999999999998844
No 50
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.54 E-value=2.3e-05 Score=68.08 Aligned_cols=29 Identities=28% Similarity=0.516 Sum_probs=25.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
+-|+|.|||||||||+|+.|+..++.+++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 35899999999999999999999987654
No 51
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=97.52 E-value=0.00012 Score=67.71 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=24.0
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++..+.|.||+|+|||||++.+++..
T Consensus 26 i~~Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 26 IKQGEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp EETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHHhcC
Confidence 3455669999999999999999999855
No 52
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.52 E-value=2.1e-05 Score=69.04 Aligned_cols=24 Identities=38% Similarity=0.632 Sum_probs=22.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhc
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~ 83 (539)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999876
No 53
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.51 E-value=3.2e-05 Score=67.36 Aligned_cols=29 Identities=38% Similarity=0.497 Sum_probs=25.1
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
.+..|+|.||||+||||+++.||..++..
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~~ 32 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDGF 32 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTTE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 34459999999999999999999998753
No 54
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=97.50 E-value=1.9e-05 Score=72.51 Aligned_cols=28 Identities=36% Similarity=0.552 Sum_probs=23.5
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+.-+.|.||+|+|||||.+.+++-.
T Consensus 23 i~~Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 23 VESGEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp ECTTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHhcCc
Confidence 3445568999999999999999999854
No 55
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=0.00011 Score=68.47 Aligned_cols=28 Identities=32% Similarity=0.497 Sum_probs=23.7
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++.-+.|.||+|+|||||++.+++..
T Consensus 37 i~~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 37 LRPGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp ECTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHhccc
Confidence 4455669999999999999999999844
No 56
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.46 E-value=3.7e-05 Score=68.67 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=28.6
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
..|.-|+|.||||+||||+|+.||..+|.+++.
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 456789999999999999999999999876553
No 57
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.46 E-value=0.00015 Score=65.04 Aligned_cols=38 Identities=26% Similarity=0.485 Sum_probs=30.1
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhh
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFV 96 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~ 96 (539)
|--|+++|.||+||||+|++||+.+ +.+...++...+.
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D~~r 42 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYR 42 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEccccee
Confidence 5568999999999999999999876 4556666665544
No 58
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.46 E-value=0.00017 Score=64.99 Aligned_cols=38 Identities=29% Similarity=0.324 Sum_probs=28.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchh
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEF 95 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~ 95 (539)
.|+-++|+||+|+||||.+--+|..+ +..+..+++..+
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 45 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 45 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccc
Confidence 35668999999999999887787755 566666655543
No 59
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.44 E-value=0.00024 Score=64.65 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=30.0
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHh----cCCCEEEEeCc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGE----AGVPFYQMAGS 93 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~----~~~~~~~~~~~ 93 (539)
|+.++.-++|+|+||+|||+|+..++.. .+.++++++..
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e 64 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFE 64 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESS
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCccccccc
Confidence 4677778999999999999999876543 25677777654
No 60
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.44 E-value=3.9e-05 Score=68.36 Aligned_cols=34 Identities=29% Similarity=0.436 Sum_probs=27.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFV 96 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~ 96 (539)
-++|.|||||||||+|+.||..+|.+++. ..++.
T Consensus 5 riil~G~pGSGKsT~a~~La~~~g~~~i~--~gdll 38 (190)
T d1ak2a1 5 RAVLLGPPGAGKGTQAPKLAKNFCVCHLA--TGDML 38 (190)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEE--HHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEe--HHHHH
Confidence 37788999999999999999999876544 44544
No 61
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.43 E-value=2.3e-05 Score=72.18 Aligned_cols=28 Identities=39% Similarity=0.697 Sum_probs=23.3
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+..+.|.||+|+|||||.+.+++-.
T Consensus 23 i~~Gei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 23 IHEGEFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred EcCCCEEEEECCCCChHHHHHHHHhcCC
Confidence 3455568899999999999999999843
No 62
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.41 E-value=0.00016 Score=72.33 Aligned_cols=100 Identities=17% Similarity=0.250 Sum_probs=65.5
Q ss_pred ecCCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHhcC---CCEEEEe-C
Q 009263 17 SQGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG---VPFYQMA-G 92 (539)
Q Consensus 17 ~~~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~~~---~~~~~~~-~ 92 (539)
....+..+++++.-.+...+.+++++. .+...+|+.||+|+||||+..++.++++ ..++.+- .
T Consensus 129 ~~~~~~~~l~~LG~~~~~~~~l~~l~~-------------~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdP 195 (401)
T d1p9ra_ 129 DKNATRLDLHSLGMTAHNHDNFRRLIK-------------RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDP 195 (401)
T ss_dssp ETTTTCCCGGGSCCCHHHHHHHHHHHT-------------SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESS
T ss_pred cccccchhhhhhcccHHHHHHHHHHHh-------------hhhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccC
Confidence 444556778888666666666665532 2334488899999999999999998874 3455542 1
Q ss_pred chhhHH------HhhhhhHHHHHHHHHHHhCCCeEEEEeCcch
Q 009263 93 SEFVEV------LVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 129 (539)
Q Consensus 93 ~~~~~~------~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~ 129 (539)
.++.-. ..+.........++.+.+..|+||+|.||-.
T Consensus 196 iE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd 238 (401)
T d1p9ra_ 196 IEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRD 238 (401)
T ss_dssp CCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCS
T ss_pred cccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcCC
Confidence 121100 1112223356677788889999999999965
No 63
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.40 E-value=3e-05 Score=69.12 Aligned_cols=38 Identities=18% Similarity=0.406 Sum_probs=30.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
|..|+|.|||||||||+|+.||..++.+++ +..++...
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~i--s~~~~~~~ 40 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHI--SAGDLLRA 40 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEEC--CHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEE--ehhHHHHH
Confidence 456899999999999999999999988765 44555443
No 64
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.40 E-value=9.7e-05 Score=64.85 Aligned_cols=63 Identities=21% Similarity=0.215 Sum_probs=40.1
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEID 128 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD 128 (539)
..|.-++++|+||+||||+|+.++...+.. .++.+++.. ..++...+..+..... .+++|...
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~~--~i~~D~~~~------~~~~~~~~~~~l~~g~-~vIiD~t~ 74 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGYV--HVNRDTLGS------WQRCVSSCQAALRQGK-RVVIDNTN 74 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTCE--EEEHHHHCS------HHHHHHHHHHHHHTTC-CEEEESCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCCE--EEchHHHHH------HHHHHHHHHHHHHCCC-CceeeCcC
Confidence 456679999999999999999999887754 445444432 1223334444444444 46667543
No 65
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=97.39 E-value=0.00021 Score=66.70 Aligned_cols=28 Identities=32% Similarity=0.366 Sum_probs=23.7
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++..+.|+||+|+|||||++.+++-.
T Consensus 38 i~~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 38 IPAGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp ECTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred EcCCCEEEEECCCCChHHHHHHHHhccc
Confidence 4455569999999999999999998844
No 66
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=97.39 E-value=4e-05 Score=70.90 Aligned_cols=27 Identities=44% Similarity=0.696 Sum_probs=22.9
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.+.-+-|.||+|+|||||++++++-.
T Consensus 27 ~~Ge~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 27 KDGEFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred cCCCEEEEECCCCChHHHHHHHHhcCC
Confidence 445568899999999999999999844
No 67
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.38 E-value=7.8e-05 Score=68.79 Aligned_cols=28 Identities=46% Similarity=0.710 Sum_probs=23.3
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+..+-|.||+|+|||||.+.+++-.
T Consensus 29 v~~Ge~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 29 IKDGEFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred ECCCCEEEEECCCCChHHHHHHHHHcCC
Confidence 3445568899999999999999999844
No 68
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.38 E-value=5.3e-05 Score=66.68 Aligned_cols=35 Identities=29% Similarity=0.551 Sum_probs=29.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
.|+|.||||+||||+|+.||..++.+++.. .++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~--~~ll~ 36 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIST--GDMFR 36 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH--HHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceech--hHHHH
Confidence 378999999999999999999999886653 44443
No 69
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.37 E-value=3.4e-05 Score=70.91 Aligned_cols=28 Identities=32% Similarity=0.400 Sum_probs=23.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+..+.|.||+|+|||||.+.+++-.
T Consensus 28 i~~Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 28 IKEGEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp ECTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCCcchhhHhccCCC
Confidence 4455568999999999999999999843
No 70
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.36 E-value=0.0002 Score=67.37 Aligned_cols=122 Identities=20% Similarity=0.251 Sum_probs=67.0
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHH-H---hhh-----------hhHHHHHHHHHH-H
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEV-L---VGV-----------GSARIRDLFKRA-K 115 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~-~---~g~-----------~~~~~~~~f~~a-~ 115 (539)
|+..++-..++||+|||||+++..++..+ +..+++++...-... + .|. ......++.+.. .
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~ 132 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVR 132 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHT
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHh
Confidence 34556668999999999999999997755 667888876532211 1 111 111122233332 3
Q ss_pred hCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCC
Q 009263 116 VNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNR 181 (539)
Q Consensus 116 ~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~ 181 (539)
...+++|+||-+..+.++..-. ....+. ......+.+..++..+..+-...++.+|++.+-
T Consensus 133 ~~~~~liIiDSi~al~~r~e~~-~~~~~~----~~~~~a~~l~~~lr~l~~~~~~~~~~vi~tNQv 193 (268)
T d1xp8a1 133 SGAIDVVVVDSVAALTPRAEIE-GDMGDS----LPGLQARLMSQALRKLTAILSKTGTAAIFINQV 193 (268)
T ss_dssp TTCCSEEEEECTTTCCCSTTC-------------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC
T ss_pred cCCCcEEEEecccccccHHHHc-ccccch----hHHHHHHHHHHHHHHHHhhhhhcCCeEEEEeEE
Confidence 3467899999999987543210 000000 111233445555555444444566677766543
No 71
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=97.35 E-value=0.00032 Score=58.56 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=28.6
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
+..+|.+|+|+|||+++-.++.+.+..++.+....
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~~ 43 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSV 43 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESCH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcChH
Confidence 46899999999999998877777887777776654
No 72
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.34 E-value=0.00016 Score=67.89 Aligned_cols=78 Identities=22% Similarity=0.333 Sum_probs=49.6
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHH-H---hhh-----------hhHHHHHHHHH-HH
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEV-L---VGV-----------GSARIRDLFKR-AK 115 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~-~---~g~-----------~~~~~~~~f~~-a~ 115 (539)
|+...+-..|+||||+|||+++-.++..+ +..+++++...-... + .|. ..+...++.+. .+
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~ 129 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALAR 129 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHh
Confidence 45566679999999999999999997765 567777765432211 0 111 11112222222 33
Q ss_pred hCCCeEEEEeCcchhhh
Q 009263 116 VNKPSVIFIDEIDALAT 132 (539)
Q Consensus 116 ~~~p~Il~iDEiD~l~~ 132 (539)
...+++++||-+..+.+
T Consensus 130 ~~~~~liViDSi~al~~ 146 (263)
T d1u94a1 130 SGAVDVIVVDSVAALTP 146 (263)
T ss_dssp HTCCSEEEEECGGGCCC
T ss_pred cCCCCEEEEECcccccc
Confidence 46778999999988864
No 73
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=97.32 E-value=0.00019 Score=67.60 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=31.4
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHh----cCCCEEEEeCc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGE----AGVPFYQMAGS 93 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~----~~~~~~~~~~~ 93 (539)
|+.++.-++|.|+||+|||+++..+|.. .+.++.+++..
T Consensus 31 G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 31 GARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp SBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeec
Confidence 5677777999999999999999888753 37788887653
No 74
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.31 E-value=8.5e-05 Score=63.15 Aligned_cols=37 Identities=24% Similarity=0.475 Sum_probs=27.7
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
+-|+|+||||+||||+|+.++.... .+..++..++..
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~~~ 39 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDYRQ 39 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechHHHHH
Confidence 3578999999999999999977553 356666555543
No 75
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.29 E-value=6.4e-05 Score=65.48 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=22.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~ 84 (539)
+..|+|+|+||+||||+|++||..++
T Consensus 6 g~~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 6 GFTIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 34588999999999999999999884
No 76
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.28 E-value=7.4e-05 Score=66.78 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=31.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
.++-|+|.||||+||||+|+.||..+|.+++ +..++...
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~llr~ 45 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLLRA 45 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhCCeeE--eccHHHHH
Confidence 4567899999999999999999999987655 55555443
No 77
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.27 E-value=8.3e-05 Score=65.65 Aligned_cols=30 Identities=33% Similarity=0.554 Sum_probs=26.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
.|+|.||||+||||+|+.||.+++.+++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeH
Confidence 378999999999999999999999887653
No 78
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.27 E-value=0.00038 Score=62.82 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=40.8
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhhHH-------H---hh----------hhhHHHHHHHHH
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFVEV-------L---VG----------VGSARIRDLFKR 113 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~~~-------~---~g----------~~~~~~~~~f~~ 113 (539)
+.|.-++|+||+|+||||.+--+|..+ +..+..+++..+... | .+ .....+.+....
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~ 89 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEK 89 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHHHH
Confidence 456779999999999999877777654 556666665544321 1 11 011223333444
Q ss_pred HHhCCCeEEEEeCcch
Q 009263 114 AKVNKPSVIFIDEIDA 129 (539)
Q Consensus 114 a~~~~p~Il~iDEiD~ 129 (539)
++.....+|+||=...
T Consensus 90 ~~~~~~d~IlIDTaGr 105 (211)
T d1j8yf2 90 FLSEKMEIIIVDTAGR 105 (211)
T ss_dssp HHHTTCSEEEEECCCS
T ss_pred hhccCCceEEEecCCc
Confidence 4556667999985543
No 79
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.27 E-value=8.6e-05 Score=65.44 Aligned_cols=30 Identities=43% Similarity=0.675 Sum_probs=26.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
.|+|.|||||||||+|+.||..++.+.+.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEch
Confidence 478999999999999999999999876653
No 80
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.25 E-value=8.8e-05 Score=66.08 Aligned_cols=36 Identities=28% Similarity=0.456 Sum_probs=28.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhh
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFV 96 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~ 96 (539)
|.-|+|.||||+||||.|+.||+.++.+.+ +..++.
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~~~i--~~g~ll 36 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHL--SAGELL 36 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCEEE--EHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCceE--cHHHHH
Confidence 446899999999999999999999986554 444443
No 81
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.24 E-value=2.4e-05 Score=69.57 Aligned_cols=28 Identities=32% Similarity=0.294 Sum_probs=23.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
+..|+|+|+||+||||+|+.||..++.+
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 3457799999999999999999988543
No 82
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.24 E-value=0.00021 Score=65.84 Aligned_cols=28 Identities=36% Similarity=0.497 Sum_probs=23.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+..+.|.||+|+|||||++.+++-.
T Consensus 28 i~~Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 28 IENGERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp ECTTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred ECCCCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3455568999999999999999999843
No 83
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.23 E-value=9.4e-05 Score=65.96 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=28.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
-++|.||||+||||+++.||..++.+++ +..++..
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g~~~i--s~gdllr 42 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFELKHL--SSGDLLR 42 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBCCEEE--EHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCCeEE--cHHHHHH
Confidence 4778899999999999999999997654 4455543
No 84
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.23 E-value=8.8e-05 Score=66.29 Aligned_cols=34 Identities=15% Similarity=0.356 Sum_probs=27.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFV 96 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~ 96 (539)
.++|.||||+||||+|+.||..+|.+++. ..++.
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~~~is--~gdl~ 43 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSFVHLS--AGDLL 43 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEEEE--HHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEe--hhHHH
Confidence 48889999999999999999999876554 44443
No 85
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.21 E-value=9.5e-05 Score=65.21 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=28.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 97 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~ 97 (539)
-|+|.||||+||||+++.||.+++.+++. ..++..
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~~i~--~~d~~~ 38 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLA--TGDMLR 38 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEEE--HHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceEe--ccccce
Confidence 37888999999999999999999876554 445543
No 86
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=97.20 E-value=0.00012 Score=67.47 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=23.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+.-+-|.||+|+|||||++.+++-.
T Consensus 28 i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 28 VPAGQIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp ECSSCEEEEEESTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHcCCc
Confidence 3444558899999999999999999844
No 87
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.19 E-value=0.00063 Score=61.25 Aligned_cols=38 Identities=26% Similarity=0.136 Sum_probs=28.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhh
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFV 96 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~ 96 (539)
++-++|.||+|+||||.+--+|..+ +..+..+++..+.
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R 50 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 50 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 4457889999999999888888755 6666666665443
No 88
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.17 E-value=0.00011 Score=66.71 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=28.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFV 96 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~ 96 (539)
-|.+.|||||||+|+|+.||+++|.+++ +..++.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~i--StGdLl 38 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLL--DSGAIY 38 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEE--EHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEE--CHHHHH
Confidence 6788899999999999999999987764 445544
No 89
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.16 E-value=0.00056 Score=61.29 Aligned_cols=28 Identities=36% Similarity=0.453 Sum_probs=23.5
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
++++.-+.|.||+|+|||||.+.+++..
T Consensus 24 i~~Gei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 24 IEKGNVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp EETTCCEEEECCTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCChHHHHHHHHhccc
Confidence 3455568899999999999999999854
No 90
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.15 E-value=0.0015 Score=58.83 Aligned_cols=40 Identities=28% Similarity=0.400 Sum_probs=29.7
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhh
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFV 96 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~ 96 (539)
..|.-++|+||+|+||||.+--+|..+ +..+..+++..+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R 51 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 51 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccc
Confidence 456779999999999999887777654 5666666655443
No 91
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.12 E-value=0.00013 Score=64.00 Aligned_cols=29 Identities=31% Similarity=0.472 Sum_probs=25.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
.|+|.||||+||||.++.||..++.+++.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 37889999999999999999999987664
No 92
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.10 E-value=0.00027 Score=66.39 Aligned_cols=79 Identities=22% Similarity=0.291 Sum_probs=49.8
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhh-HHH---hhh-----------hhHHHHHHHHHH-H
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFV-EVL---VGV-----------GSARIRDLFKRA-K 115 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~-~~~---~g~-----------~~~~~~~~f~~a-~ 115 (539)
|+..++-..|+||||+|||++|..++..+ +..+++++...-. ..+ .|. ..+.+.++.+.. +
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~ 135 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIR 135 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHh
Confidence 56666779999999999999998776644 6677787764422 111 011 111122222222 3
Q ss_pred hCCCeEEEEeCcchhhhh
Q 009263 116 VNKPSVIFIDEIDALATR 133 (539)
Q Consensus 116 ~~~p~Il~iDEiD~l~~~ 133 (539)
...+++|+||-+..+.++
T Consensus 136 ~~~~~liIiDSi~al~~~ 153 (269)
T d1mo6a1 136 SGALDIVVIDSVAALVPR 153 (269)
T ss_dssp TTCEEEEEEECSTTCCCH
T ss_pred cCCCCEEEEecccccccH
Confidence 456789999999988853
No 93
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=97.10 E-value=0.00047 Score=63.56 Aligned_cols=28 Identities=32% Similarity=0.341 Sum_probs=23.5
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++.-+-|.||+|+|||||.+++++..
T Consensus 25 v~~Gei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 25 IEEGEIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 3455567899999999999999999855
No 94
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.07 E-value=5.6e-05 Score=69.70 Aligned_cols=23 Identities=39% Similarity=0.621 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-+.|.||+|+|||||.+.+++-.
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCChHHHHHHHHHcCC
Confidence 35588999999999999999954
No 95
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.07 E-value=0.00015 Score=65.83 Aligned_cols=28 Identities=36% Similarity=0.704 Sum_probs=24.8
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
|.+.||||+||||+|+.||.+++.+++.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 5577999999999999999999988654
No 96
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.02 E-value=0.00012 Score=70.86 Aligned_cols=70 Identities=24% Similarity=0.251 Sum_probs=47.4
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcC--CCEEEE-eCchhhH-------HHhhhhhHHHHHHHHHHHhCCCeEEEEeCcc
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAG--VPFYQM-AGSEFVE-------VLVGVGSARIRDLFKRAKVNKPSVIFIDEID 128 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~--~~~~~~-~~~~~~~-------~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD 128 (539)
.+++|++||+|+|||++++++++... ..++.+ +..++.- .......-.+.+++..+.+..|+.|++.|+-
T Consensus 166 ~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCccC
Confidence 45799999999999999999998773 233333 1111110 0111122245677888889999999999984
No 97
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=96.99 E-value=0.00039 Score=64.19 Aligned_cols=27 Identities=41% Similarity=0.405 Sum_probs=22.9
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
..+.-+-|.||+|+|||||.+++++..
T Consensus 30 ~~Gei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 30 PRGQIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 445568899999999999999999844
No 98
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=96.98 E-value=0.001 Score=54.84 Aligned_cols=36 Identities=25% Similarity=0.205 Sum_probs=23.3
Q ss_pred CCCceEEEECCCCCcHHHHHH-HHHH---hcCCCEEEEeC
Q 009263 57 KPPHGVLLEGPPGCGKTLVAK-AIAG---EAGVPFYQMAG 92 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~-alA~---~~~~~~~~~~~ 92 (539)
+.++.++|++|+|+|||..+- ++.. +.+..++.+..
T Consensus 5 ~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~p 44 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAP 44 (140)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEES
T ss_pred HcCCcEEEEcCCCCChhHHHHHHHHHHhhhcCceeeeeec
Confidence 456789999999999996653 3333 22444554443
No 99
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.96 E-value=0.00071 Score=62.96 Aligned_cols=27 Identities=30% Similarity=0.468 Sum_probs=22.9
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+++..+-|.||+|+|||+|++++++..
T Consensus 28 ~~Gei~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 28 NKGDVTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp ETTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHCCC
Confidence 445558899999999999999999854
No 100
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.95 E-value=0.00076 Score=63.70 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=26.2
Q ss_pred hhhhcCC--CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 50 LFDKMGI--KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 50 ~~~~~g~--~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.++.+.+ .++.-+.|.||+|+|||||++.+++.+
T Consensus 51 vL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 51 VLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp EEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred EEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCC
Confidence 3444443 445558899999999999999999865
No 101
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=96.94 E-value=0.00022 Score=66.05 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=23.4
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++.-+.|.||+|+|||||++.+++-.
T Consensus 25 i~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 25 AQPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp ECTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 3455568999999999999999998844
No 102
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.80 E-value=0.00053 Score=59.73 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=22.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~ 84 (539)
+-|+|.||||+||||+++.|+..++
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999998773
No 103
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.00064 Score=62.09 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=29.6
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc---------CCCEEEEeC
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA---------GVPFYQMAG 92 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~---------~~~~~~~~~ 92 (539)
|+.+..-++|+||||||||+++..++..+ +.++++++.
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~ 76 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDT 76 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEES
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEee
Confidence 46777789999999999999999997643 345666644
No 104
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.74 E-value=0.00035 Score=60.07 Aligned_cols=31 Identities=19% Similarity=0.166 Sum_probs=24.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEe
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMA 91 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~ 91 (539)
-+.|+|+||||||||++.+++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 47899999999999999999875 55554443
No 105
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.73 E-value=0.00054 Score=61.81 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=33.6
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc----CCCEEEEeCchhhHH
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA----GVPFYQMAGSEFVEV 98 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~----~~~~~~~~~~~~~~~ 98 (539)
.+..|+|+|.||+|||++|++|+..+ +.+++.+++..+...
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~~ 67 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFG 67 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTTT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHHh
Confidence 45569999999999999999999765 678888888776543
No 106
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.70 E-value=0.0022 Score=62.63 Aligned_cols=21 Identities=29% Similarity=0.485 Sum_probs=17.2
Q ss_pred ceEEEECCCCCcHHHHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAKAIA 80 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA 80 (539)
+-++|+||||||||+++..+.
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~l 184 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKLL 184 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHHH
Confidence 358899999999999886543
No 107
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.66 E-value=0.0023 Score=55.63 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=26.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
-++|.|+||+||||+++.++..+ +..+..++..
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~ 38 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYG 38 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 47889999999999999999987 4455555543
No 108
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.57 E-value=0.0014 Score=57.56 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=26.7
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCch
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSE 94 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~ 94 (539)
|.-|-|.||+|+||||+|+.|+..+ +.....++...
T Consensus 22 ~~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~~~ 60 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDD 60 (198)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhccccccceeccccc
Confidence 3346699999999999999999866 34555555433
No 109
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=96.55 E-value=0.0012 Score=61.39 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=23.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+..+.-+-|.||+|+|||||++++++-.
T Consensus 25 i~~GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 25 ARAGDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp ECTTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3445568899999999999999998844
No 110
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.46 E-value=0.0089 Score=55.42 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=30.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc-------------CCCEEEEeCchh
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA-------------GVPFYQMAGSEF 95 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~-------------~~~~~~~~~~~~ 95 (539)
+-+..-.+|+|+||+|||+|+-.+|..+ +.++++++....
T Consensus 26 ~~pg~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~~ 78 (274)
T d1nlfa_ 26 MVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDP 78 (274)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSSC
T ss_pred ccCCcEEEEEeCCCCCHHHHHHHHHHHHHcCCCcccccccCCCceEEEeccch
Confidence 3445568899999999999999988753 246778876543
No 111
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=96.41 E-value=0.0025 Score=58.19 Aligned_cols=27 Identities=30% Similarity=0.518 Sum_probs=22.9
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHh
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~ 82 (539)
++.+.-+-|.||+|+|||||.+++++.
T Consensus 22 I~~Gei~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 22 VRAGEILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp EETTCEEECBCCTTSSHHHHHHHHHTS
T ss_pred EcCCCEEEEECCCCCcHHHHHHHHhCC
Confidence 345566889999999999999999983
No 112
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.38 E-value=0.008 Score=54.83 Aligned_cols=23 Identities=22% Similarity=0.283 Sum_probs=20.6
Q ss_pred CceEEEECCCCCcHHHHHHHHHH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~ 81 (539)
.+.++|+||..+|||++.|++|-
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l 63 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTAL 63 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEEeccCchhhHHHHHHHHH
Confidence 35689999999999999999976
No 113
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.30 E-value=0.0038 Score=55.46 Aligned_cols=34 Identities=32% Similarity=0.406 Sum_probs=22.1
Q ss_pred CceEEEECCCCCcHHHHHHH-HHHhc--CCCEEEEeC
Q 009263 59 PHGVLLEGPPGCGKTLVAKA-IAGEA--GVPFYQMAG 92 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~a-lA~~~--~~~~~~~~~ 92 (539)
.+.+++.+|+|+|||+.+-. +...+ +..++.+..
T Consensus 40 ~~~~il~apTGsGKT~~a~l~i~~~~~~~~~vl~l~P 76 (202)
T d2p6ra3 40 GKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVP 76 (202)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEcCCCCchhHHHHHHHHHHhhccCcceeecc
Confidence 45789999999999987633 33322 334555443
No 114
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.27 E-value=0.0015 Score=57.47 Aligned_cols=28 Identities=29% Similarity=0.552 Sum_probs=23.7
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCE
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPF 87 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~ 87 (539)
+.|+|+||+|+|||+|++.++++....|
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 3589999999999999999999875433
No 115
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.25 E-value=0.0015 Score=57.86 Aligned_cols=27 Identities=37% Similarity=0.605 Sum_probs=23.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPF 87 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~ 87 (539)
.|+|.||+|+|||++++.++.....-|
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCce
Confidence 488999999999999999999876444
No 116
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.19 E-value=0.012 Score=52.07 Aligned_cols=23 Identities=30% Similarity=0.338 Sum_probs=20.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHh
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~ 82 (539)
+.|+|.|+||+|||+|.+++.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999874
No 117
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.19 E-value=0.0013 Score=58.36 Aligned_cols=29 Identities=24% Similarity=0.235 Sum_probs=25.6
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
|+.+..-++|+||||+|||+|+..+|...
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 56777789999999999999999998765
No 118
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=96.17 E-value=0.0056 Score=51.82 Aligned_cols=22 Identities=36% Similarity=0.702 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-|+|.|+||+|||+|.+++.+.
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999999753
No 119
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.13 E-value=0.0058 Score=54.52 Aligned_cols=33 Identities=30% Similarity=0.294 Sum_probs=28.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~ 93 (539)
..+|.+|+|+|||.++-+++.+++.+.+.+...
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p~ 119 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVVPT 119 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEESS
T ss_pred CcEEEeCCCCCceehHHhHHHHhcCceeEEEcc
Confidence 457889999999999999999998888777653
No 120
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.11 E-value=0.0025 Score=55.71 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=21.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhc
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.++|.||+|+|||+|++.+..+.
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 468999999999999999998754
No 121
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=95.90 E-value=0.0035 Score=53.43 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=25.9
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
+++.-++|.|+=|+|||+++|.+++.++.+
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 344568899999999999999999999864
No 122
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.89 E-value=0.0022 Score=58.74 Aligned_cols=29 Identities=24% Similarity=0.169 Sum_probs=25.0
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
|+.++.-++|+||||+|||+++..+|...
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 56666779999999999999999998754
No 123
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.88 E-value=0.0033 Score=56.25 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=23.2
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCC
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~ 85 (539)
|--|-|.||+|+||||+++.|+..++.
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhch
Confidence 345679999999999999999998864
No 124
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.85 E-value=0.0017 Score=59.58 Aligned_cols=29 Identities=31% Similarity=0.307 Sum_probs=25.0
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
|+....-++|+||||+|||+|+-.+|...
T Consensus 32 Glp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 32 GIETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp SEESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 46666779999999999999999998765
No 125
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.82 E-value=0.0029 Score=55.25 Aligned_cols=26 Identities=27% Similarity=0.466 Sum_probs=22.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~ 84 (539)
++-++|.||||+|||++++.+..+..
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 35689999999999999999998864
No 126
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=95.82 E-value=0.002 Score=56.96 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=28.1
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
|....++++|+|||+||||+++.+|++-++..++
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vi 82 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVI 82 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEEC
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhCCEEE
Confidence 3455578999999999999999999999875443
No 127
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=95.79 E-value=0.019 Score=51.82 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=19.4
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
.++|+||...|||++.|+++-
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l 57 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTAL 57 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHH
Confidence 589999999999999999976
No 128
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.58 E-value=0.0061 Score=52.09 Aligned_cols=30 Identities=20% Similarity=0.101 Sum_probs=24.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQM 90 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~ 90 (539)
-+-++|++|||||||+..++.++ |..+..+
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vi 35 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTV 35 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 45699999999999999999876 5555554
No 129
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.54 E-value=0.012 Score=55.06 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhc------CCCEEEEeCchhh
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEA------GVPFYQMAGSEFV 96 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~------~~~~~~~~~~~~~ 96 (539)
.+.|--|-|.|++|||||||+..|...+ +..+..++..+|.
T Consensus 24 ~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY 70 (286)
T d1odfa_ 24 NKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY 70 (286)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB
T ss_pred CCCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCC
Confidence 3455567789999999999999887654 4567777877763
No 130
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.44 E-value=0.0052 Score=53.31 Aligned_cols=31 Identities=29% Similarity=0.419 Sum_probs=25.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
..+|+||.|+||+|||++|-.+... |..++.
T Consensus 13 ~g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 3568999999999999999998875 655543
No 131
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.43 E-value=0.0073 Score=57.36 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=33.1
Q ss_pred CCCCceEEEECCCCCcHHHHHHHHHHhcC-----CCEEEEeCchhh
Q 009263 56 IKPPHGVLLEGPPGCGKTLVAKAIAGEAG-----VPFYQMAGSEFV 96 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~la~alA~~~~-----~~~~~~~~~~~~ 96 (539)
.+.|--|.|.|++|+||||+|+.|+..+. ..+..++..+|.
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFL 122 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeE
Confidence 35566788999999999999999999873 457777877774
No 132
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=95.31 E-value=0.021 Score=47.64 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|+||+|||+|.+.+.+.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 789999999999999999764
No 133
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.27 E-value=0.0065 Score=52.10 Aligned_cols=21 Identities=48% Similarity=0.827 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|++|+|||+|++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999998764
No 134
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.26 E-value=0.076 Score=48.84 Aligned_cols=39 Identities=33% Similarity=0.429 Sum_probs=27.6
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHh---cCCCEEEEeCchh
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGE---AGVPFYQMAGSEF 95 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~---~~~~~~~~~~~~~ 95 (539)
..|..-||+|..|+|||-++-..+.. .|..+..+...+.
T Consensus 102 ~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~ 143 (264)
T d1gm5a3 102 EKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSI 143 (264)
T ss_dssp SSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHH
T ss_pred cCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHh
Confidence 34567899999999999988776543 3656665555443
No 135
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=95.20 E-value=0.0072 Score=52.92 Aligned_cols=30 Identities=30% Similarity=0.432 Sum_probs=24.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEE
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQ 89 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~ 89 (539)
|--|-|+|++|+|||++|+.+ .+.|.+++.
T Consensus 3 p~IIgitG~~gSGKstva~~l-~~~g~~~~~ 32 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALL-RSWGYPVLD 32 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHH-HHTTCCEEE
T ss_pred CEEEEEECCCCCCHHHHHHHH-HHCCCeEEE
Confidence 445679999999999999999 567877654
No 136
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.20 E-value=0.0039 Score=53.37 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|++.|++|+|||+|+..+.+.
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 799999999999999999874
No 137
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=95.16 E-value=0.042 Score=46.34 Aligned_cols=23 Identities=30% Similarity=0.290 Sum_probs=20.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-++|.|++|+|||+|+..+...-
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 37899999999999999997743
No 138
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.14 E-value=0.0042 Score=56.28 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=25.0
Q ss_pred CCCCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 55 GIKPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 55 g~~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
|+.++.-++|+||||+|||+++..+|..+
T Consensus 30 Gl~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 30 GLESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp SEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 35666779999999999999999998765
No 139
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=95.13 E-value=0.021 Score=49.13 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=20.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
.|.|.|.||+|||+|++++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999874
No 140
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.08 E-value=0.042 Score=52.44 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=41.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---C--CCEEEEeCchhhH----------------------------HHhhhhhHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---G--VPFYQMAGSEFVE----------------------------VLVGVGSARI 107 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~--~~~~~~~~~~~~~----------------------------~~~g~~~~~~ 107 (539)
-|-|+||||+|||+|+.+++..+ + +.++.++.+.-.+ ...|......
T Consensus 56 ~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~rm~~~~~~~~~~ir~~~~~g~lgg~~~~~ 135 (327)
T d2p67a1 56 RLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQRA 135 (327)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC---------------CTTTTCTTEEEEEECC-----CHHHHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchhHHHHhcccccccccccccccccccchhhh
Confidence 48899999999999999998754 2 2334444332111 0122233345
Q ss_pred HHHHHHHHhCCCeEEEEeCcch
Q 009263 108 RDLFKRAKVNKPSVIFIDEIDA 129 (539)
Q Consensus 108 ~~~f~~a~~~~p~Il~iDEiD~ 129 (539)
............++++|+-+..
T Consensus 136 ~~~~~~~~~~g~d~iliEtvG~ 157 (327)
T d2p67a1 136 RELMLLCEAAGYDVVIVETVGV 157 (327)
T ss_dssp HHHHHHHHHTTCSEEEEEEECC
T ss_pred hHHHHHHHhcCCCeEEEeeccc
Confidence 5555556666778999887754
No 141
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=94.97 E-value=0.044 Score=52.16 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=42.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CC--CEEEEeCchhhHH----------------------------HhhhhhHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GV--PFYQMAGSEFVEV----------------------------LVGVGSARI 107 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~--~~~~~~~~~~~~~----------------------------~~g~~~~~~ 107 (539)
-+-|.||||+|||+|..+++..+ +. -++.++.+.-.+. ..|.-....
T Consensus 53 ~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~gg~llgdr~rm~~~~~~~~~~ir~~~~~~~~gg~~~~~ 132 (323)
T d2qm8a1 53 RVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAAKT 132 (323)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGGGSTTGGGCTTEEEECCCCCSSHHHHHHHH
T ss_pred EEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHHHhccccchhhHHHHhcccceeeccccccccccchhHHH
Confidence 37799999999999999998754 33 3444443322110 112223344
Q ss_pred HHHHHHHHhCCCeEEEEeCcch
Q 009263 108 RDLFKRAKVNKPSVIFIDEIDA 129 (539)
Q Consensus 108 ~~~f~~a~~~~p~Il~iDEiD~ 129 (539)
+...........+++||.-+..
T Consensus 133 ~~~i~~~~~~g~d~iiiETVG~ 154 (323)
T d2qm8a1 133 RETMLLCEAAGFDVILVETVGV 154 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHHHhhccCCCCeEEEeehhh
Confidence 5555555556678999887744
No 142
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=94.85 E-value=0.007 Score=52.48 Aligned_cols=30 Identities=33% Similarity=0.403 Sum_probs=24.4
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
...|+||.||+|+|||++|-.+... |..++
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~~-G~~lv 43 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLINK-NHLFV 43 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHTT-TCEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc-CCcee
Confidence 3568999999999999999998764 55544
No 143
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.83 E-value=0.14 Score=45.05 Aligned_cols=50 Identities=20% Similarity=0.222 Sum_probs=28.5
Q ss_pred CcCcccCcHHHHHHHHHHHHHhcChhhhhhcC---CCCCceEEEECCCCCcHHHH
Q 009263 24 KFSDVAGIDEAVEELQELVRYLKNPELFDKMG---IKPPHGVLLEGPPGCGKTLV 75 (539)
Q Consensus 24 ~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g---~~~~~giLL~GppGtGKT~l 75 (539)
+|+++.-.+...+.|.+. .+..|...+... +-.++.+++.+|+|+|||+.
T Consensus 2 sF~~l~L~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTla 54 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEA--GFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAA 54 (206)
T ss_dssp CGGGGCCCHHHHHHHHHT--TCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred ChHHcCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhh
Confidence 577765555665555542 133332222111 11245799999999999953
No 144
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.82 E-value=0.049 Score=46.98 Aligned_cols=21 Identities=29% Similarity=0.363 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|++|+|||+|++.+.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 789999999999999999853
No 145
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=94.80 E-value=0.009 Score=51.43 Aligned_cols=29 Identities=31% Similarity=0.433 Sum_probs=23.7
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcCCCE
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAGVPF 87 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~~~~ 87 (539)
...|+||.|++|+|||++|-++... |..+
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~~~-g~~l 42 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELIKR-GHRL 42 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT-TCEE
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHc-CCeE
Confidence 3568999999999999999888776 4433
No 146
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.77 E-value=0.011 Score=52.63 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=21.9
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~ 84 (539)
+-++|+||+|+|||+|.+.+.....
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3488999999999999999998764
No 147
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.75 E-value=0.023 Score=51.51 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=24.4
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
++.+++.+|+|+|||..+-..+-.. +..++.+...
T Consensus 58 g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~Pt 95 (237)
T d1gkub1 58 KESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPT 95 (237)
T ss_dssp TCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEESC
T ss_pred CCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEecc
Confidence 4679999999999998665544322 5556666553
No 148
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=94.70 E-value=0.071 Score=45.16 Aligned_cols=21 Identities=29% Similarity=0.518 Sum_probs=19.3
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
.|.|.|+||+|||+|++++.+
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999975
No 149
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.69 E-value=0.01 Score=50.94 Aligned_cols=21 Identities=19% Similarity=0.404 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|+||+|||+|++.+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 789999999999999999864
No 150
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=94.65 E-value=0.038 Score=47.06 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=19.2
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
-+++.|+||+|||+|++++.+
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 499999999999999999865
No 151
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=94.63 E-value=0.13 Score=44.62 Aligned_cols=32 Identities=38% Similarity=0.453 Sum_probs=22.9
Q ss_pred eEEEECCCCCcHHHHHHHHHH----hcCCCEEEEeC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG----EAGVPFYQMAG 92 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~----~~~~~~~~~~~ 92 (539)
++|+++|+|+|||.++-.++. ..+..++.+.+
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 578999999999986665554 33556666654
No 152
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.62 E-value=0.0068 Score=51.76 Aligned_cols=21 Identities=24% Similarity=0.414 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|++|+|||+|++.+.+.
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999999874
No 153
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.55 E-value=0.12 Score=45.95 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=32.3
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCC---CCCceEEEECCCCCcHHHHH
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGI---KPPHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~---~~~~giLL~GppGtGKT~la 76 (539)
.+|+|+.-.+...+.|.+. .+..|...+...+ -.++.+++..|+|||||...
T Consensus 12 ~sF~~l~L~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 12 DSFDDMNLSESLLRGIYAY--GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCGGGSCCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhh
Confidence 5899986555665666442 2444443322211 13467999999999999744
No 154
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=94.41 E-value=0.036 Score=50.97 Aligned_cols=42 Identities=31% Similarity=0.453 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHHHHHHHh
Q 009263 34 AVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 34 ~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~~ 82 (539)
.+..|.++...++... ..+-.|+|.|.||+|||+|..+|.++
T Consensus 14 ~~~~l~e~~~~l~~~~-------~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 14 TQTKLLELLGNLKQED-------VNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHHHTT-------CCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhcC-------CCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 3455555555544321 23447999999999999999999874
No 155
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.29 E-value=0.022 Score=48.40 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|.+|+|||+|++.+.+.
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999874
No 156
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=94.28 E-value=0.01 Score=50.85 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|.+|+|||+|++.+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998763
No 157
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=94.23 E-value=0.14 Score=44.98 Aligned_cols=57 Identities=12% Similarity=0.171 Sum_probs=32.1
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcC----CCCCceEEEECCCCCcHHHHHHHHHH
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMG----IKPPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g----~~~~~giLL~GppGtGKT~la~alA~ 81 (539)
.+|+|+.-.++..+.|.+. .+..|...+... +.....+++..|+|+|||+..-....
T Consensus 4 msf~~l~l~~~l~~~l~~~--g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~ 64 (208)
T d1hv8a1 4 MNFNELNLSDNILNAIRNK--GFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLI 64 (208)
T ss_dssp CCGGGSSCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHH
T ss_pred cCHHHcCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccc
Confidence 4788874444555555431 133332222111 11234799999999999997755544
No 158
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.16 E-value=0.01 Score=52.04 Aligned_cols=32 Identities=28% Similarity=0.309 Sum_probs=26.4
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
+.|.-|.|.|+.|+||||+++.|++.++...+
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 34556889999999999999999999865443
No 159
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.13 E-value=0.013 Score=48.99 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|+||+|||+|+..+.+.
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999874
No 160
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.08 E-value=0.013 Score=52.91 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=22.8
Q ss_pred EEEECCCCCcHHHHHHHHHHhc--CCCEEEE
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA--GVPFYQM 90 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~--~~~~~~~ 90 (539)
+++.||+|+|||||.+++.+.+ +.....+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 6899999999999999998755 3344444
No 161
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.04 E-value=0.024 Score=50.42 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=25.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEe
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMA 91 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~ 91 (539)
-|.|.|+.|+||||+++.|++.+ +.+++.+.
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 35666999999999999999876 67776654
No 162
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.93 E-value=0.011 Score=54.95 Aligned_cols=22 Identities=32% Similarity=0.369 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHHHhc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~ 83 (539)
-+|+||+|+|||++..||+-.+
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 3899999999999999997533
No 163
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=93.87 E-value=0.02 Score=50.66 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=26.1
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
|-|+|++||||||+++.+. +.|.+++. +..+...
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vid--aD~i~~~ 38 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVD--ADVVARE 38 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEE--HHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEE--chHHHHH
Confidence 5689999999999999886 68888764 4444433
No 164
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.84 E-value=0.16 Score=44.68 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=30.5
Q ss_pred CcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcC---CCCCceEEEECCCCCcHHH
Q 009263 22 GVKFSDVAGIDEAVEELQELVRYLKNPELFDKMG---IKPPHGVLLEGPPGCGKTL 74 (539)
Q Consensus 22 ~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g---~~~~~giLL~GppGtGKT~ 74 (539)
..+|+|+.-.++..+.|.+. .+..|...+... +-.++.+++..|+|||||+
T Consensus 2 ~~~F~~l~L~~~l~~~l~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 2 GNEFEDYCLKRELLMGIFEM--GWEKPSPIQEESIPIALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp CSSGGGSCCCHHHHHHHHTT--TCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHH
T ss_pred CCChhccCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEeeccCcccccc
Confidence 35688876555665555442 133333222211 1135679999999999996
No 165
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.78 E-value=0.27 Score=43.35 Aligned_cols=55 Identities=22% Similarity=0.255 Sum_probs=33.4
Q ss_pred CCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCC---CCCceEEEECCCCCcHHHHH
Q 009263 20 STGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGI---KPPHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 20 ~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~---~~~~giLL~GppGtGKT~la 76 (539)
.+-.+|+|+.-.++..+.|.+. .+..+...+...+ -.++.+++..|+|||||...
T Consensus 7 ~~~~sF~~l~l~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 7 KVVYKFDDMELDENLLRGVFGY--GFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCCCCGGGGTCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHH
T ss_pred ccccChhhCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhh
Confidence 4557899985555555555442 2444433322221 23567999999999999743
No 166
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=93.75 E-value=0.017 Score=48.61 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=20.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-++|.|+||+|||+|.+++.+.
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999874
No 167
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.74 E-value=0.35 Score=42.91 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=34.2
Q ss_pred CCCCcCcCcccCcHHHHHHHHHHHHHhcChhhhhhcC---CCCCceEEEECCCCCcHHH
Q 009263 19 GSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMG---IKPPHGVLLEGPPGCGKTL 74 (539)
Q Consensus 19 ~~~~~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g---~~~~~giLL~GppGtGKT~ 74 (539)
.....+|+++.-.+...+.|.+. .+..|...+... +-.++.+++..|+|||||.
T Consensus 13 ~~~~~sF~~l~L~~~l~~~L~~~--g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 13 VDVTPTFDTMGLREDLLRGIYAY--GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCCCCSGGGGCCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCCCCHHHCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 34556899996666666666542 244443322221 1135689999999999996
No 168
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=93.73 E-value=0.015 Score=49.77 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=20.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHh
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~ 82 (539)
.-+++.|+||+|||+|.+.+...
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 35899999999999999999753
No 169
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=93.71 E-value=0.19 Score=45.09 Aligned_cols=39 Identities=26% Similarity=0.122 Sum_probs=28.0
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchh
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEF 95 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~ 95 (539)
..|...||+|.+|+|||.++-..+..+ |..++.+.....
T Consensus 74 ~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~ 115 (233)
T d2eyqa3 74 PLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL 115 (233)
T ss_dssp SSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHH
Confidence 345678999999999999887766543 556666555443
No 170
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=93.64 E-value=0.02 Score=50.82 Aligned_cols=35 Identities=31% Similarity=0.390 Sum_probs=26.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 98 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~ 98 (539)
-|-|+|++|+|||++++.+. ++|.+++ ++..+...
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~~vi--daD~i~~~ 39 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGINVI--DADIIARQ 39 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTCEEE--EHHHHHHH
T ss_pred EEEEECCCcCCHHHHHHHHH-HCCCcEE--EchHHHHH
Confidence 46689999999999999886 6787655 44555443
No 171
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.54 E-value=0.32 Score=42.60 Aligned_cols=50 Identities=22% Similarity=0.217 Sum_probs=30.1
Q ss_pred CcCcccCcHHHHHHHHHHHHHhcChhhhhhcC---CCCCceEEEECCCCCcHHHH
Q 009263 24 KFSDVAGIDEAVEELQELVRYLKNPELFDKMG---IKPPHGVLLEGPPGCGKTLV 75 (539)
Q Consensus 24 ~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g---~~~~~giLL~GppGtGKT~l 75 (539)
+|+|+.-.++..+.|.+. -+..|...+... +-.++.+++..|+|||||..
T Consensus 2 ~F~dl~L~~~l~~~l~~~--g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDC--GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CSTTSCCCHHHHHHHHHT--TCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred CccccCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCeEEEeccccccccc
Confidence 577876555555555542 244443332221 12356899999999999963
No 172
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=93.48 E-value=0.023 Score=53.14 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=27.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCchhh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGSEFV 96 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~~~~ 96 (539)
-|-+.|++|+|||++++++.+.+ +.....+++.+|.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCCC
Confidence 58899999999999999998765 6677778887764
No 173
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.44 E-value=0.035 Score=48.79 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=25.9
Q ss_pred EEEECCCCCcHHHHHHHHHHhc---CCCEEEEeC
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAG 92 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~---~~~~~~~~~ 92 (539)
|.|.|+.|+||||+++.|++.+ |.+++.+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~ 36 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEec
Confidence 6788999999999999999865 677776644
No 174
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=93.31 E-value=0.021 Score=53.45 Aligned_cols=18 Identities=33% Similarity=0.348 Sum_probs=14.9
Q ss_pred CceEEEECCCCCcHHHHH
Q 009263 59 PHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la 76 (539)
...+|+.|+||||||+++
T Consensus 14 ~~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 14 TGPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SSEEEECCCTTSCHHHHH
T ss_pred CCCEEEEeeCCccHHHHH
Confidence 345899999999999864
No 175
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=93.28 E-value=0.03 Score=51.90 Aligned_cols=58 Identities=26% Similarity=0.256 Sum_probs=39.2
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcch
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 129 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD~ 129 (539)
...+.++|+|||+||||+++.+++.-+|. +..++.+. + -|..+......++++||...
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~~lg~-~~~~~~~~--~------------~f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAHTVPF-YGCVNWTN--E------------NFPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHSSC-EEECCTTC--S------------SCTTGGGSSCSEEEECSCCE
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHHHhcc-hhhccccC--C------------CccccccCCCEEEEEeCCCc
Confidence 34567899999999999999999999864 32222111 0 12334444556999999764
No 176
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=93.17 E-value=0.021 Score=48.30 Aligned_cols=22 Identities=36% Similarity=0.545 Sum_probs=19.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-+++.|+||+|||+|.+.+.+.
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 4899999999999999999764
No 177
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.15 E-value=0.046 Score=46.82 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|.+|+|||+|++.+.+.
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999863
No 178
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.01 E-value=0.026 Score=47.77 Aligned_cols=20 Identities=15% Similarity=0.293 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|+|.|+||+|||+|+..+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999886
No 179
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=92.95 E-value=0.018 Score=49.33 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=19.1
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
-|+|.|+||+|||+|..++..
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999965
No 180
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=92.95 E-value=0.049 Score=50.77 Aligned_cols=37 Identities=27% Similarity=0.353 Sum_probs=23.5
Q ss_pred CCCCceEEEECCCCCcHHH-HHHHHHHh---cCCCEEEEeC
Q 009263 56 IKPPHGVLLEGPPGCGKTL-VAKAIAGE---AGVPFYQMAG 92 (539)
Q Consensus 56 ~~~~~giLL~GppGtGKT~-la~alA~~---~~~~~~~~~~ 92 (539)
++..+.+++.+|+|+|||+ ++-++... .+...+.+..
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~~~~~lvi~P 46 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAP 46 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHHTCCEEEEES
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhcCCEEEEEcc
Confidence 3566789999999999995 33233222 2555555543
No 181
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.87 E-value=0.026 Score=49.60 Aligned_cols=23 Identities=22% Similarity=0.572 Sum_probs=21.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
.|+|.|+||+|||+|..++.+.-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 68999999999999999998764
No 182
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.79 E-value=0.039 Score=49.73 Aligned_cols=30 Identities=20% Similarity=0.217 Sum_probs=25.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEE
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFY 88 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~ 88 (539)
|+-|.|-|+-|+||||+++.|++.++...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 667899999999999999999999865443
No 183
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.71 E-value=0.03 Score=47.65 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|++|+|||+|++.+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 799999999999999999864
No 184
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=92.59 E-value=0.023 Score=48.42 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=20.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-|+|.|.||+|||+|+.++.+.
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 5899999999999999999764
No 185
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.54 E-value=0.033 Score=47.35 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|++|+|||+|++.+...
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999999874
No 186
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.44 E-value=0.034 Score=47.58 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|++|+|||+|++.+.+.
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999999763
No 187
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.44 E-value=0.03 Score=47.71 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|++|+|||+|++.+.+.
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999999873
No 188
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.42 E-value=0.034 Score=49.15 Aligned_cols=23 Identities=26% Similarity=0.446 Sum_probs=20.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-|.|.|+.|+||||+++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47788999999999999999876
No 189
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.30 E-value=0.022 Score=48.99 Aligned_cols=22 Identities=18% Similarity=0.498 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
.|+|.|+||+|||+|..++.++
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999863
No 190
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=92.29 E-value=0.03 Score=50.63 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=25.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~ 93 (539)
-|-|+|+.||||||+|+.+++..|. ..++++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~--~~i~~a 33 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSA--VKYQLA 33 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCE--EECCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCC--eEEccc
Confidence 4679999999999999999998874 444433
No 191
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.19 E-value=0.039 Score=47.04 Aligned_cols=20 Identities=30% Similarity=0.504 Sum_probs=18.7
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
+++.|++|+|||+|++.+.+
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 78999999999999999876
No 192
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.11 E-value=0.04 Score=46.85 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|.+|+|||+|+..+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999864
No 193
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.08 E-value=0.041 Score=46.35 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|++|+|||+|++.+...
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999863
No 194
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.06 E-value=0.041 Score=46.58 Aligned_cols=20 Identities=30% Similarity=0.290 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|+|.|.+|+|||+|++.+..
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999986
No 195
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.05 E-value=0.069 Score=47.47 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=26.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAG 92 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~ 92 (539)
-|.|.|+-|+||||+++.|++.+......+..
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhCCEEEEE
Confidence 47788999999999999999999776665543
No 196
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.02 E-value=0.037 Score=47.12 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|.+|+|||+|.+.+...
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999999873
No 197
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.02 E-value=0.22 Score=43.59 Aligned_cols=50 Identities=18% Similarity=0.207 Sum_probs=27.9
Q ss_pred CcCcccCcHHHHHHHHHHHHHhcChhhhhhcCC---CCCceEEEECCCCCcHHHH
Q 009263 24 KFSDVAGIDEAVEELQELVRYLKNPELFDKMGI---KPPHGVLLEGPPGCGKTLV 75 (539)
Q Consensus 24 ~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~---~~~~giLL~GppGtGKT~l 75 (539)
+|+++.-.+...+.|.+. .+..|...+...+ -.++.+++..|+|||||..
T Consensus 2 ~F~~l~L~~~l~~~l~~~--g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKTL--RFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHA 54 (209)
T ss_dssp CGGGSCCCHHHHHHHHHT--TCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHH
T ss_pred ccccCCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCCCeEeeccccccccee
Confidence 466765455555555431 1333322221111 1245799999999999973
No 198
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=91.98 E-value=0.039 Score=52.00 Aligned_cols=23 Identities=35% Similarity=0.345 Sum_probs=16.9
Q ss_pred CceEEEECCCCCcHHHHH-HHHHH
Q 009263 59 PHGVLLEGPPGCGKTLVA-KAIAG 81 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la-~alA~ 81 (539)
...+++.|+||||||+++ ..++.
T Consensus 24 ~g~~lV~g~aGSGKTt~l~~ri~~ 47 (318)
T d1pjra1 24 EGPLLIMAGAGSGKTRVLTHRIAY 47 (318)
T ss_dssp SSCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHHHH
Confidence 345899999999999754 33443
No 199
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.93 E-value=0.038 Score=46.75 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|+||+|||+|++++...
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999874
No 200
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.89 E-value=0.044 Score=47.25 Aligned_cols=20 Identities=30% Similarity=0.514 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|++.|.+|+|||+|+..+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999986
No 201
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.78 E-value=0.039 Score=46.88 Aligned_cols=21 Identities=24% Similarity=0.313 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|++.|.+|+|||+|++.+...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999998763
No 202
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=91.71 E-value=0.61 Score=45.39 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=32.1
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchh
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 95 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~ 95 (539)
+..+|.|-+|||||+++.+++...+.|++.+.....
T Consensus 32 ~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~ 67 (413)
T d1t5la1 32 KHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKT 67 (413)
T ss_dssp SEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHH
T ss_pred CcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCHH
Confidence 357899999999999999999999999999987654
No 203
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=91.61 E-value=0.1 Score=48.29 Aligned_cols=27 Identities=30% Similarity=0.346 Sum_probs=23.9
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
..|+-+++.|.-|+||||++-++|..+
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~l 32 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRL 32 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHH
Confidence 568889999999999999999998765
No 204
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.59 E-value=0.043 Score=46.40 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-|+|.|++|+|||+|++.+.+.
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3889999999999999999864
No 205
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.54 E-value=0.05 Score=46.17 Aligned_cols=21 Identities=33% Similarity=0.480 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|++|+|||+|++.+.+.
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998773
No 206
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.53 E-value=0.045 Score=46.73 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|.+|+|||+|++.+.+.
T Consensus 9 v~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998863
No 207
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.53 E-value=0.044 Score=46.71 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|+|.|.+|+|||+|++.+...
T Consensus 8 I~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998763
No 208
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=91.52 E-value=0.034 Score=48.44 Aligned_cols=21 Identities=19% Similarity=0.389 Sum_probs=19.4
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
-|.|.|+||+|||+|.++|.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 389999999999999999975
No 209
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.50 E-value=0.051 Score=46.29 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|++.|+||+|||+|+..+.+.
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999998874
No 210
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.43 E-value=0.052 Score=45.90 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|++.|.+|+|||+|++.+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 799999999999999999874
No 211
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=91.42 E-value=0.37 Score=44.55 Aligned_cols=25 Identities=32% Similarity=0.494 Sum_probs=21.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~ 83 (539)
+.-++|.|++|||||+|+..+++..
T Consensus 43 GQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 43 GQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp TCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 3459999999999999999998744
No 212
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.38 E-value=0.054 Score=45.78 Aligned_cols=21 Identities=29% Similarity=0.417 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|.+|+|||+|++.+.+.
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999863
No 213
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.33 E-value=0.048 Score=45.91 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|++.|.+|+|||+|++.+.+
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999986
No 214
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.29 E-value=0.048 Score=46.63 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHHHhc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~ 83 (539)
+++.|++|+|||+|+..+.+.-
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999998743
No 215
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=91.29 E-value=0.048 Score=48.91 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=23.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEE
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQM 90 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~ 90 (539)
.+..+|.|+||+|||+|..++........-.+
T Consensus 95 ~kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~v 126 (225)
T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLKLRVSEV 126 (225)
T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCCCC----
T ss_pred CCeEEEECCCCCCHHHHHHhhcchhhhhccCc
Confidence 45689999999999999999987766554433
No 216
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.96 E-value=0.062 Score=45.52 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=19.1
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|.+|+|||+|++.+...
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999998764
No 217
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.89 E-value=0.03 Score=50.37 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=22.8
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCC
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~ 85 (539)
+-|.|.|+.|+||||+++.|++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 34789999999999999999998843
No 218
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=90.81 E-value=0.15 Score=44.50 Aligned_cols=33 Identities=21% Similarity=0.100 Sum_probs=23.3
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCCEEEEe
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMA 91 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~~~~~~ 91 (539)
.+.+++.-|+|+|||..+....-......+.+.
T Consensus 40 g~~vlv~apTGsGKT~~~~~~~~~~~~~~~~v~ 72 (206)
T d1oywa2 40 GRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72 (206)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHHSSSEEEEEC
T ss_pred CCCEEEEcCCCCCCcchhhhhhhhccCceEEec
Confidence 357999999999999887655554444444443
No 219
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.80 E-value=0.067 Score=45.41 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-++|.|.+|+|||+|++.+.+.
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999999874
No 220
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.67 E-value=0.065 Score=45.61 Aligned_cols=20 Identities=45% Similarity=0.720 Sum_probs=18.7
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|+|.|.+|+|||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 79999999999999999875
No 221
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=90.57 E-value=0.073 Score=52.40 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=27.6
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
.+++++.|++|+|||++++.+...+ +.+++.++..
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3679999999999999988776543 6777777653
No 222
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.57 E-value=0.046 Score=51.39 Aligned_cols=22 Identities=32% Similarity=0.320 Sum_probs=19.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-.+|+||.|+|||++..||.-.
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~ 46 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVG 46 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHH
Confidence 4689999999999999999643
No 223
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.45 E-value=0.063 Score=46.72 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|++.|++|+|||+|++.+...
T Consensus 9 ivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhhC
Confidence 789999999999999999863
No 224
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.17 E-value=0.07 Score=45.81 Aligned_cols=21 Identities=29% Similarity=0.620 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|.+|+|||+|++.+...
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999999874
No 225
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.16 E-value=0.045 Score=46.67 Aligned_cols=20 Identities=40% Similarity=0.507 Sum_probs=8.5
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|+|.|.+|+|||+|++++.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998875
No 226
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=90.09 E-value=0.059 Score=46.21 Aligned_cols=25 Identities=24% Similarity=0.307 Sum_probs=20.8
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHH
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~ 81 (539)
+..--+++.|+||+|||+|.+.+..
T Consensus 15 ~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 15 NKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CceEEEEEECCCCCCHHHHHHHHhc
Confidence 3444699999999999999999854
No 227
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.08 E-value=0.072 Score=45.91 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|.+|+|||+|++.+.+.
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 889999999999999998874
No 228
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.02 E-value=0.076 Score=45.60 Aligned_cols=22 Identities=18% Similarity=0.237 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-++|.|.+|+|||+|++.+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3899999999999999999874
No 229
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.00 E-value=0.038 Score=47.08 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
+++.|++|+|||+|+.++.+.
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988653
No 230
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.98 E-value=0.069 Score=45.39 Aligned_cols=22 Identities=23% Similarity=0.489 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
.|.|.|.||+|||+|.++|.+.
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999999863
No 231
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.84 E-value=0.031 Score=46.78 Aligned_cols=21 Identities=24% Similarity=0.551 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
|.|.|.||+|||+|+.++.++
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999875
No 232
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=89.81 E-value=0.07 Score=45.75 Aligned_cols=22 Identities=32% Similarity=0.498 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-|.|.|.+|+|||+|+.++.+.
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4889999999999999999864
No 233
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=89.69 E-value=0.47 Score=42.49 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=14.5
Q ss_pred CceEEEECCCCCcHHH
Q 009263 59 PHGVLLEGPPGCGKTL 74 (539)
Q Consensus 59 ~~giLL~GppGtGKT~ 74 (539)
++.+++..|+|||||+
T Consensus 58 g~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 58 HRDIMACAQTGSGKTA 73 (238)
T ss_dssp TCCEEEECCTTSSHHH
T ss_pred CCCEEEECCCCCCcce
Confidence 4679999999999998
No 234
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.67 E-value=0.08 Score=45.84 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=19.4
Q ss_pred EEEECCCCCcHHHHHHHHHHhc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~ 83 (539)
|+|.|++|+|||+|+..+...-
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999987643
No 235
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=89.17 E-value=0.029 Score=48.45 Aligned_cols=23 Identities=26% Similarity=0.287 Sum_probs=20.3
Q ss_pred EEEECCCCCcHHHHHHHHHHhcC
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~ 84 (539)
.+|+||.|+|||++..||.--+.
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 57899999999999999987663
No 236
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=89.07 E-value=0.076 Score=45.57 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=18.7
Q ss_pred eEEEECCCCCcHHHHHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~ 81 (539)
-|-|.|+||+|||+|..++.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999965
No 237
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.04 E-value=0.19 Score=41.23 Aligned_cols=31 Identities=23% Similarity=0.331 Sum_probs=22.6
Q ss_pred EEEECCCCCcHHH-HHHHH--HHhcCCCEEEEeC
Q 009263 62 VLLEGPPGCGKTL-VAKAI--AGEAGVPFYQMAG 92 (539)
Q Consensus 62 iLL~GppGtGKT~-la~al--A~~~~~~~~~~~~ 92 (539)
=+++||-.+|||+ |.+.+ ....+.+++.++.
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp 38 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKP 38 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 3789999999999 66665 3345777776654
No 238
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.59 E-value=0.11 Score=44.96 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=17.4
Q ss_pred EEEECCCCCcHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAI 79 (539)
Q Consensus 62 iLL~GppGtGKT~la~al 79 (539)
++|.|.+|+|||+|++.+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 799999999999999999
No 239
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=88.48 E-value=0.087 Score=44.97 Aligned_cols=20 Identities=35% Similarity=0.451 Sum_probs=18.6
Q ss_pred EEEECCCCCcHHHHHHHHHH
Q 009263 62 VLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~ 81 (539)
|.|.|.||+|||+|.+++.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999975
No 240
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=88.38 E-value=0.037 Score=49.84 Aligned_cols=28 Identities=29% Similarity=0.506 Sum_probs=20.5
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
++..+|.|++|+|||+|..++..+....
T Consensus 97 ~~~~vl~G~SGVGKSSLiN~L~~~~~~~ 124 (231)
T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPELGLR 124 (231)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC-----
T ss_pred cceEEEECCCCccHHHHHHhhccHhHhh
Confidence 4567889999999999999998765544
No 241
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=88.08 E-value=0.092 Score=44.61 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=19.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~ 81 (539)
.-|.|.|+|++|||+|.+++.+
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4599999999999999999854
No 242
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=87.87 E-value=0.11 Score=48.91 Aligned_cols=24 Identities=29% Similarity=0.322 Sum_probs=20.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~ 84 (539)
--+|+||.|+|||++..||+-.++
T Consensus 28 lnvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHC
Confidence 348999999999999999986554
No 243
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=87.76 E-value=0.22 Score=43.41 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=26.2
Q ss_pred ceEEEECC-CCCcHHHHHHHHHHhc---CCCEEEEeC
Q 009263 60 HGVLLEGP-PGCGKTLVAKAIAGEA---GVPFYQMAG 92 (539)
Q Consensus 60 ~giLL~Gp-pGtGKT~la~alA~~~---~~~~~~~~~ 92 (539)
+.++++|- +|+|||+++-.+|..+ |..+..++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 45799999 5999999999998765 667766653
No 244
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.29 E-value=0.17 Score=43.22 Aligned_cols=23 Identities=13% Similarity=0.146 Sum_probs=20.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-+++.|++|+|||+|+..+.+.-
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhCC
Confidence 48999999999999999998743
No 245
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=87.06 E-value=1.8 Score=41.82 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=31.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 95 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~ 95 (539)
.++|.|.+|++|++++.+++...+.|++.+..+..
T Consensus 30 ~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~ 64 (408)
T d1c4oa1 30 FVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKI 64 (408)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCHH
Confidence 47999999999999999999999999998876643
No 246
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=86.84 E-value=0.15 Score=45.21 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=19.9
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-++|.|++|+|||+|++.+...-
T Consensus 8 KilllG~~~vGKTsll~~~~~~~ 30 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRILH 30 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 48999999999999999986544
No 247
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=86.30 E-value=0.2 Score=47.59 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=24.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcC--CCEEEE
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAG--VPFYQM 90 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~--~~~~~~ 90 (539)
-|.|-|+-|+||||+++.+++.++ ..+..+
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~~~~v~~~ 39 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGCSSCEEEE
T ss_pred EEEEECCccCCHHHHHHHHHHHhccCCCeEEE
Confidence 378899999999999999999874 344444
No 248
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=85.68 E-value=0.74 Score=39.29 Aligned_cols=31 Identities=32% Similarity=0.457 Sum_probs=24.5
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEEeCc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 93 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~~~~ 93 (539)
+|+.|+..+|||.+|..++... .+++|+...
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~-~~~~YiAT~ 32 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDA-PQVLYIATS 32 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSC-SSEEEEECC
T ss_pred EEEECCCCccHHHHHHHHHhcC-CCcEEEEcc
Confidence 6899999999999999998654 455665443
No 249
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.55 E-value=0.2 Score=42.94 Aligned_cols=23 Identities=26% Similarity=0.241 Sum_probs=20.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-++|.|.+|+|||+|++.+...-
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 37999999999999999997643
No 250
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=85.27 E-value=0.45 Score=43.29 Aligned_cols=35 Identities=31% Similarity=0.330 Sum_probs=27.8
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
.+-++++|.=|+||||++-.+|..+ |..++.+++.
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3457888999999999877776644 7788888776
No 251
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=85.24 E-value=0.82 Score=40.31 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=29.9
Q ss_pred CceEEEECCCCCcHHHHHHHHHHhc-----CCCEEEEeCchhhHHH
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGEA-----GVPFYQMAGSEFVEVL 99 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~~-----~~~~~~~~~~~~~~~~ 99 (539)
+.|++|.=++|+|||..+-+++..+ ..+++.+....+...|
T Consensus 31 ~~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~~W 76 (230)
T d1z63a1 31 GFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKNW 76 (230)
T ss_dssp TCCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHHHH
T ss_pred CCCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchhhhhHH
Confidence 4578999999999999988887654 2456666666655544
No 252
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.06 E-value=0.15 Score=47.39 Aligned_cols=24 Identities=33% Similarity=0.444 Sum_probs=20.4
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~ 84 (539)
--+|+||.|+|||++.+||+-.++
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~lg 49 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWVFG 49 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTSC
T ss_pred eEEEECCCCCcHHHHHHHHHHHhC
Confidence 358999999999999999976543
No 253
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=84.18 E-value=0.46 Score=40.30 Aligned_cols=22 Identities=23% Similarity=0.237 Sum_probs=19.7
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
.|-|.|.|++|||+|..++.+.
T Consensus 7 nIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEEeCCCCcHHHHHHHHHHh
Confidence 5889999999999999999753
No 254
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.95 E-value=0.3 Score=43.41 Aligned_cols=23 Identities=39% Similarity=0.469 Sum_probs=20.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-.+|+|.-|+|||||.+.+.+..
T Consensus 5 v~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEeeCCCCCHHHHHHHHHhcC
Confidence 36899999999999999998864
No 255
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.73 E-value=0.29 Score=47.26 Aligned_cols=25 Identities=36% Similarity=0.424 Sum_probs=21.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~ 85 (539)
--+|+||.|+|||++..||+-.+|.
T Consensus 27 l~~i~G~NGsGKS~ileAi~~~lg~ 51 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMMDAISFVLGV 51 (427)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3589999999999999999765543
No 256
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.91 E-value=0.31 Score=41.46 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHHHh
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~ 82 (539)
++|.|..|+|||+|++.+...
T Consensus 5 ivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 799999999999999998653
No 257
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.57 E-value=3.2 Score=37.62 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=21.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhc
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~ 83 (539)
+-++|.|++|+|||+|+..+++..
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHH
Confidence 349999999999999999998763
No 258
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=81.36 E-value=0.3 Score=46.18 Aligned_cols=24 Identities=29% Similarity=0.472 Sum_probs=21.7
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCC
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~ 85 (539)
|.|-|+-|+||||+++.+++.+..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 678899999999999999998754
No 259
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.69 E-value=0.52 Score=45.79 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=21.6
Q ss_pred CCceEEEECCCCCcHHHHHHHHHH
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~ 81 (539)
.|-.|.+.|.||+|||+|..++.+
T Consensus 55 ~~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 55 SVLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHhC
Confidence 456799999999999999999975
No 260
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=80.03 E-value=0.49 Score=43.22 Aligned_cols=24 Identities=33% Similarity=0.455 Sum_probs=21.0
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhc
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~ 83 (539)
+++.+.|..|+|||+|+.++....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 578999999999999999996544
No 261
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=79.87 E-value=1.7 Score=39.79 Aligned_cols=44 Identities=18% Similarity=0.144 Sum_probs=30.0
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc----------CCCEEEEeCchhhHHHh
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA----------GVPFYQMAGSEFVEVLV 100 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~----------~~~~~~~~~~~~~~~~~ 100 (539)
....|++|.=..|+|||..+-++...+ ..+++.+....+...|.
T Consensus 77 ~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW~ 130 (298)
T d1z3ix2 77 ENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWY 130 (298)
T ss_dssp TTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHHH
T ss_pred ccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccchhhHHHH
Confidence 456789999999999998665554322 12467777766666554
No 262
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=79.50 E-value=0.74 Score=41.58 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=27.2
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
.|.++|.=|+||||+|-.+|..+ |..++.+++.
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 46679999999999998887755 7788888765
No 263
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=79.37 E-value=0.52 Score=43.24 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=21.5
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhc
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~ 83 (539)
++|-|.|..|+|||+|+.++....
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 589999999999999999997654
No 264
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=79.13 E-value=0.31 Score=46.03 Aligned_cols=24 Identities=29% Similarity=0.544 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCC
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~ 85 (539)
|.|-|+-|+||||+++.+++.++.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC----
T ss_pred EEEECCcCCCHHHHHHHHHHHhCC
Confidence 678899999999999999987743
No 265
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=77.85 E-value=0.37 Score=45.03 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.4
Q ss_pred ceEEEECCCCCcHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAK 77 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~ 77 (539)
...|+.|.+|||||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 457999999999999764
No 266
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=76.62 E-value=0.49 Score=43.97 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.3
Q ss_pred ceEEEECCCCCcHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAK 77 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~ 77 (539)
...|+.|.+|||||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 457899999999999773
No 267
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=76.39 E-value=3.1 Score=37.70 Aligned_cols=24 Identities=29% Similarity=0.225 Sum_probs=19.4
Q ss_pred CceEEEECCCCCcHHHHHHHHHHh
Q 009263 59 PHGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la~alA~~ 82 (539)
+.-++|.|++|+|||+|+..++..
T Consensus 67 GQr~~Ifg~~g~GKt~l~~~~~~~ 90 (276)
T d1fx0a3 67 GQRELIIGDRQTGKTAVATDTILN 90 (276)
T ss_dssp TCBCBEEESSSSSHHHHHHHHHHT
T ss_pred CceEeeccCCCCChHHHHHHHHhh
Confidence 344899999999999999876553
No 268
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=76.01 E-value=0.64 Score=40.50 Aligned_cols=24 Identities=29% Similarity=0.241 Sum_probs=20.8
Q ss_pred CCceEEEECCCCCcHHHHHHHHHH
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~ 81 (539)
|+-+|.+.|-+++|||+|+.+|..
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHH
Confidence 445789999999999999999964
No 269
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=75.70 E-value=1.4 Score=38.39 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=23.6
Q ss_pred EEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 63 LLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 63 LL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
+..|..|+|||+++..+|..+ +.++..+++.
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 445999999999999988755 5666666653
No 270
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=73.82 E-value=0.65 Score=43.30 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=15.0
Q ss_pred ceEEEECCCCCcHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 60 ~giLL~GppGtGKT~la 76 (539)
...|+.|.+|||||||.
T Consensus 15 d~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 34789999999999988
No 271
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.39 E-value=1 Score=35.60 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=25.3
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc-----CCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA-----GVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~-----~~~~~~~~~~ 93 (539)
.++|.|-+|+||+++|+++...+ ++++--++..
T Consensus 8 ~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~~ 45 (122)
T d1g8fa3 8 SIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHN 45 (122)
T ss_dssp EEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecCC
Confidence 58999999999999999996654 3555555444
No 272
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=73.08 E-value=11 Score=34.06 Aligned_cols=25 Identities=24% Similarity=0.158 Sum_probs=20.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHh
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~ 82 (539)
.+.-++|.|++|+|||+++..++..
T Consensus 67 ~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 67 RGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp TTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred CCCEEEeecCCCCChHHHHHHHHHh
Confidence 3445899999999999998877654
No 273
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=72.52 E-value=2 Score=37.34 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=23.3
Q ss_pred eEEEE-CCCCCcHHHHHHHHHHhc---CCCEEEEeC
Q 009263 61 GVLLE-GPPGCGKTLVAKAIAGEA---GVPFYQMAG 92 (539)
Q Consensus 61 giLL~-GppGtGKT~la~alA~~~---~~~~~~~~~ 92 (539)
-|-++ +..|+|||+++-.+|..+ |.+++.+++
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34455 788999999999998755 556665554
No 274
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=71.87 E-value=1.5 Score=39.83 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=25.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc---CCCEEEEeCc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA---GVPFYQMAGS 93 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~---~~~~~~~~~~ 93 (539)
-|.++|.=|+|||+++-.+|..+ |..++.+++.
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 35569999999999777776543 7788877764
No 275
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.68 E-value=0.8 Score=42.93 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.5
Q ss_pred CceEEEECCCCCcHHHHH
Q 009263 59 PHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 59 ~~giLL~GppGtGKT~la 76 (539)
...++-||++|+|||+..
T Consensus 76 n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 76 NGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CcceeeecccCCCCceec
Confidence 346889999999999986
No 276
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=70.68 E-value=1.3 Score=38.98 Aligned_cols=22 Identities=36% Similarity=0.406 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHHHhc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~ 83 (539)
|-+.|.|++|||+|+.+|....
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 7889999999999999997754
No 277
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=70.54 E-value=1.2 Score=46.12 Aligned_cols=26 Identities=31% Similarity=0.402 Sum_probs=22.9
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+.+|++.|.+|+|||..+|.+.+.+
T Consensus 85 ~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 85 ENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 45689999999999999999998755
No 278
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=70.27 E-value=1 Score=45.66 Aligned_cols=22 Identities=36% Similarity=0.360 Sum_probs=16.6
Q ss_pred ceEEEECCCCCcHHHHHH-HHHH
Q 009263 60 HGVLLEGPPGCGKTLVAK-AIAG 81 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~-alA~ 81 (539)
..+++.|.||||||+.+- .++.
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~ 47 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAY 47 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeCchHHHHHHHHHHHH
Confidence 458889999999988664 3443
No 279
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=69.73 E-value=1.3 Score=46.08 Aligned_cols=26 Identities=27% Similarity=0.395 Sum_probs=22.3
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
...+|++.|.+|+|||..+|.+.+.+
T Consensus 124 ~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 124 QNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 45689999999999999999887754
No 280
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=68.54 E-value=1.5 Score=45.82 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=22.7
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+.+|++.|.+|+|||..+|.+.+.+
T Consensus 90 ~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 90 EDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999887765
No 281
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=67.48 E-value=1.4 Score=46.49 Aligned_cols=26 Identities=27% Similarity=0.450 Sum_probs=21.4
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+.+|++.|.+|+|||..++.+.+.+
T Consensus 122 ~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 122 ENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 45689999999999998888776544
No 282
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=67.24 E-value=1.4 Score=41.95 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=15.0
Q ss_pred ceEEEECCCCCcHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 60 ~giLL~GppGtGKT~la 76 (539)
..++-||.+|||||+..
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 36888999999999986
No 283
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=66.88 E-value=1.6 Score=45.58 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=22.7
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+.+|++.|.+|+|||..++.+.+.+
T Consensus 93 ~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 93 RNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999887754
No 284
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=65.81 E-value=2.3 Score=39.86 Aligned_cols=49 Identities=20% Similarity=0.255 Sum_probs=28.1
Q ss_pred cCcCcccCcHHHHHHHHHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHH
Q 009263 23 VKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 23 ~~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la 76 (539)
.+|+.|.+.+...+++-+.+..+- ...+. -....++-||.+|+|||+..
T Consensus 52 f~FD~vf~~~~~q~~vy~~v~~~v-~~~l~----G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 52 FKFDKIFDQQDTNVDVFKEVGQLV-QSSLD----GYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEESEEECTTCCHHHHHHHHHHHH-GGGGG----TCCEEEEEECCTTSSHHHHH
T ss_pred eecCeEeCCCCCHHHHHHHhhhhh-cchhc----ccccceeeeeccCCcccccc
Confidence 568888775443333333222211 11111 12346888999999999987
No 285
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=65.47 E-value=3.4 Score=38.78 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=15.0
Q ss_pred ceEEEECCCCCcHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 60 ~giLL~GppGtGKT~la 76 (539)
..++-||.+|+|||+.+
T Consensus 88 ~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 88 VCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred ceeeeeccCCCCCceee
Confidence 46899999999999985
No 286
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=64.88 E-value=3.7 Score=28.41 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHH
Q 009263 240 GARLAQLVQEAALVAVRKGHESILSSDMDDAVDR 273 (539)
Q Consensus 240 ~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~ 273 (539)
---+..++.+|...+...++..|+.+|+..|+++
T Consensus 34 e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 34 EEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 3457788999999999999999999999999975
No 287
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=64.78 E-value=1.6 Score=46.02 Aligned_cols=26 Identities=27% Similarity=0.336 Sum_probs=21.9
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
.+.+|++.|.+|+|||..++.+.+.+
T Consensus 120 ~nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 120 ENQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 35689999999999999988887654
No 288
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=64.07 E-value=3.4 Score=37.20 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=33.2
Q ss_pred CcCcccCcHHHHHHHHHHHHHhcChhhhhhcCC-CCCceEEEECCCCCcHHHHHHHHHHh
Q 009263 24 KFSDVAGIDEAVEELQELVRYLKNPELFDKMGI-KPPHGVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 24 ~~~dv~G~~~~k~~L~~~v~~l~~~~~~~~~g~-~~~~giLL~GppGtGKT~la~alA~~ 82 (539)
+..+-.|.......+.+++...... +...+. ..+-.+++.|-|.+|||+|+.++.+.
T Consensus 78 sa~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 78 NSVNGQGLNQIVPASKEILQEKFDR--MRAKGVKPRAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CTTTCTTGGGHHHHHHHHHHHHHHH--HHHTTCCCCCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred ecccCCCccccchhhhhhhhhhhhh--hhhccCCCCceEEEEEecCccchhhhhhhhhcc
Confidence 3334455555555554444332111 111121 23345899999999999999999874
No 289
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=63.84 E-value=2.4 Score=38.66 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=19.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHh
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE 82 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~ 82 (539)
-++++|.-++|||+|+.++.+.
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHTS
T ss_pred eEEEEcCCCCCHHHHHHHHhCC
Confidence 3788999999999999999863
No 290
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=62.83 E-value=1.9 Score=41.02 Aligned_cols=17 Identities=29% Similarity=0.429 Sum_probs=14.9
Q ss_pred ceEEEECCCCCcHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 60 ~giLL~GppGtGKT~la 76 (539)
..++-||++|||||+..
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEeeccCCCccceEe
Confidence 36889999999999885
No 291
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=60.82 E-value=1.8 Score=42.08 Aligned_cols=26 Identities=23% Similarity=0.215 Sum_probs=18.4
Q ss_pred CCCceEEEECCCCCcHHHHH-HHHHHh
Q 009263 57 KPPHGVLLEGPPGCGKTLVA-KAIAGE 82 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la-~alA~~ 82 (539)
+..+.+|+.+.+|||||+++ ..++.-
T Consensus 14 p~~g~~lv~A~AGsGKT~~l~~r~~~l 40 (485)
T d1w36b1 14 PLQGERLIEASAGTGKTFTIAALYLRL 40 (485)
T ss_dssp CCSSCEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCchHHHHHHHHHHHHH
Confidence 34456888999999999854 444443
No 292
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=60.28 E-value=2 Score=40.19 Aligned_cols=17 Identities=29% Similarity=0.417 Sum_probs=15.0
Q ss_pred eEEEECCCCCcHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAK 77 (539)
Q Consensus 61 giLL~GppGtGKT~la~ 77 (539)
.|+-||.+|+|||+..-
T Consensus 87 ~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 87 SCFAYGQTGSGKTYTML 103 (330)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEeeeccccccceeee
Confidence 58899999999999864
No 293
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=60.24 E-value=1.9 Score=40.70 Aligned_cols=46 Identities=20% Similarity=0.258 Sum_probs=27.6
Q ss_pred CcCcCcccCcHHHHHHH-----HHHHHHhcChhhhhhcCCCCCceEEEECCCCCcHHHHH
Q 009263 22 GVKFSDVAGIDEAVEEL-----QELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVA 76 (539)
Q Consensus 22 ~~~~~dv~G~~~~k~~L-----~~~v~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~la 76 (539)
..+|+.|.+.+..-+++ ..++..+-. .....++-||++|+|||+++
T Consensus 47 ~f~FD~vf~~~~~q~~vy~~~~~plv~~~l~---------G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 47 SFTFDRVFDMSCKQSDIFDFSIKPTVDDILN---------GYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEECSEEECTTCCHHHHHHHHTHHHHHHHTT---------TCCEEEEEECSTTSSHHHHH
T ss_pred eEECCeEcCCCCCHHHHHHHHHHHHHHHhhc---------cCceeEEecccCCCCcceee
Confidence 36788887755333333 223332111 12346889999999999885
No 294
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=59.53 E-value=12 Score=25.98 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=30.3
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
|.+|+-||++.-.-|+.+..+.++++..++...
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~~ 35 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENRGFDFEMINVDR 35 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEeCCCCccHHHHHHHHHhcCceeEEEeecC
Confidence 689999999999999999999999999988754
No 295
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=59.05 E-value=2.8 Score=38.37 Aligned_cols=26 Identities=27% Similarity=0.514 Sum_probs=21.4
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhc
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~ 83 (539)
..| -+++.|..++|||+|..+|.+.-
T Consensus 23 ~lP-~ivVvG~~ssGKSSliNaLlG~~ 48 (306)
T d1jwyb_ 23 DLP-QIVVVGSQSSGKSSVLENIVGRD 48 (306)
T ss_dssp CCC-EEEEEECSSSSHHHHHHHHHTSC
T ss_pred CCC-eEEEEeCCCCCHHHHHHHHhCCC
Confidence 344 37889999999999999998743
No 296
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=58.93 E-value=1.8 Score=39.70 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=24.7
Q ss_pred EEEECCCCCcHHHHHHHHHHh-----cCCCEEEEeC
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE-----AGVPFYQMAG 92 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~-----~~~~~~~~~~ 92 (539)
+=|.|.|.+|||||-.++.+. .+.||.++.+
T Consensus 13 iGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~p 48 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDP 48 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCT
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCccC
Confidence 779999999999999999764 2567766543
No 297
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=58.71 E-value=6.3 Score=34.80 Aligned_cols=54 Identities=13% Similarity=0.136 Sum_probs=31.9
Q ss_pred HHHHHHhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcC
Q 009263 110 LFKRAKVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLL 185 (539)
Q Consensus 110 ~f~~a~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~l 185 (539)
.+..+....|.+|+|||++.- .+......+..++..+. ... .-||.+|++++.+
T Consensus 217 a~~~~l~~~~~llllDEp~~~------------------Ld~~~~~~l~~~l~~~~---~~~-~qviv~TH~~~~~ 270 (292)
T g1f2t.1 217 AMSLYLAGEISLLILDEPTPY------------------LDEERRRKLITIMERYL---KKI-PQVILVSHDEELK 270 (292)
T ss_dssp HHHHHHHSSCSEEEEESCSCT------------------TCHHHHHHHHHHHHHTG---GGS-SEEEEEESCGGGG
T ss_pred HHhhhhcCCCCEEEEeCCccc------------------CCHHHHHHHHHHHHHHH---hCC-CEEEEEeecHHHH
Confidence 344556678889999999863 23333444555555542 222 2455578876654
No 298
>d1dgna_ a.77.1.3 (A:) Iceberg {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.81 E-value=3.7 Score=30.15 Aligned_cols=35 Identities=20% Similarity=0.404 Sum_probs=27.7
Q ss_pred HHHHHhHH---------HHHHHHHHHHHhcccCHHHHHHHHhcC
Q 009263 463 TLLRRHHA---------ALLKTVKVLLNQKEIGREEIDFILNNY 497 (539)
Q Consensus 463 ~ll~~~~~---------~l~~la~~Ll~~e~l~~~ei~~il~~~ 497 (539)
++|++||. .++.+.+.|++++.|+.+|.+.|....
T Consensus 3 ~~L~~~R~~lv~~l~~~~v~~vlD~L~~~~Vlt~~e~e~I~~~~ 46 (89)
T d1dgna_ 3 QLLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDEN 46 (89)
T ss_dssp CHHHHTHHHHHTTCCHHHHHHHHHHHHHHTCSCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHCCCCCHHHHHHHHhcC
Confidence 45566664 356788999999999999999998743
No 299
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=57.59 E-value=2.4 Score=39.12 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHHHh----cCCCEEEEe
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE----AGVPFYQMA 91 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~----~~~~~~~~~ 91 (539)
|=|.|-|.+|||||-.++.+. .+.||.+++
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nypftT~~ 36 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIE 36 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--------------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCCCCccc
Confidence 568999999999999999542 255665543
No 300
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.49 E-value=2.4 Score=39.79 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=22.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~ 84 (539)
++|.+.|..|.|||+|+.++....+
T Consensus 18 RNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp EEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred cEEEEEeCCCCcHHHHHHHHHHHCC
Confidence 5799999999999999999976554
No 301
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=56.03 E-value=3.4 Score=35.30 Aligned_cols=24 Identities=33% Similarity=0.297 Sum_probs=20.8
Q ss_pred CCceEEEECCCCCcHHHHHHHHHH
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~ 81 (539)
|.-++.+.|-++.|||||+.+|..
T Consensus 2 p~ini~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 2 PHVNVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCcHHHHHHHHHH
Confidence 345789999999999999999975
No 302
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=54.55 E-value=2.5 Score=39.70 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=15.3
Q ss_pred ceEEEECCCCCcHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAK 77 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~ 77 (539)
..++-||..|+|||+..-
T Consensus 82 ~~i~aYGqtgSGKTyTm~ 99 (345)
T d1x88a1 82 CTIFAYGQTGTGKTFTME 99 (345)
T ss_dssp EEEEEEECTTSSHHHHHT
T ss_pred ceEEeeeeccccceEEee
Confidence 368899999999999763
No 303
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=54.13 E-value=2.5 Score=40.03 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.8
Q ss_pred eEEEECCCCCcHHHHHH
Q 009263 61 GVLLEGPPGCGKTLVAK 77 (539)
Q Consensus 61 giLL~GppGtGKT~la~ 77 (539)
.++-||.+|+|||+..-
T Consensus 116 tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 116 TCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred eEEeeccCCCCCceeee
Confidence 58889999999999863
No 304
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=54.04 E-value=5 Score=36.31 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=25.0
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc----CCCEEEEeC-chhhHH
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA----GVPFYQMAG-SEFVEV 98 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~----~~~~~~~~~-~~~~~~ 98 (539)
..++.-|+|+|||.++-+++..+ +.+.+.+.. ..+...
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp~~~Lv~Q 172 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQ 172 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHH
T ss_pred CceeEEEcccCccHHHHHHHHHhhhcccceEEEEEcCchhHHH
Confidence 45777899999999888777533 444555443 345444
No 305
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=53.74 E-value=4.1 Score=34.80 Aligned_cols=25 Identities=32% Similarity=0.482 Sum_probs=21.8
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHH
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~ 81 (539)
+|.-++.+.|....|||||+.+|..
T Consensus 6 ~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 6 QPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCeEEEEEEccCCcHHHHHHHHHh
Confidence 4556899999999999999999975
No 306
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=53.36 E-value=3.5 Score=35.90 Aligned_cols=27 Identities=19% Similarity=0.350 Sum_probs=22.8
Q ss_pred CCceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 58 PPHGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 58 ~~~giLL~GppGtGKT~la~alA~~~~ 84 (539)
|.-+|.+.|-.+.|||+|+.+|....|
T Consensus 2 p~iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 2 PHLNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred CccEEEEEecCCCCHHHHHHHHHHHcC
Confidence 345789999999999999999977665
No 307
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=53.19 E-value=28 Score=26.06 Aligned_cols=61 Identities=25% Similarity=0.440 Sum_probs=42.1
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEID 128 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD 128 (539)
++|.||.-+=|++.|..+..++..|.+.-+.-++.. .+..++-+-|....... -++||-+-
T Consensus 3 iilegpdccfkstvaaklskelkypiikgssfelak----sgneklfehfnkladed--nviidrfv 63 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAK----SGNEKLFEHFNKLADED--NVIIDRFV 63 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEECCCHHHHH----HCHHHHHHHHHHHTTCC--SEEEESCH
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecCchhhhhh----ccCHHHHHHHHhhcccc--ceeeehhh
Confidence 688999999999999999999999988655444322 23445555555543333 36777653
No 308
>d1cy5a_ a.77.1.3 (A:) Apoptotic protease activating factor 1, APAF-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.88 E-value=12 Score=27.17 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=28.2
Q ss_pred HHHHHHHhHHHH------HHHHHHHHHhcccCHHHHHHHHhc
Q 009263 461 TVTLLRRHHAAL------LKTVKVLLNQKEIGREEIDFILNN 496 (539)
Q Consensus 461 a~~ll~~~~~~l------~~la~~Ll~~e~l~~~ei~~il~~ 496 (539)
.+.+|.+||..+ ..+.+.|+.++.|+.+|.+.|...
T Consensus 5 ~r~~L~~~r~~Lv~~l~~~~vl~~L~~~~vlt~~e~e~I~~~ 46 (93)
T d1cy5a_ 5 ARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNE 46 (93)
T ss_dssp HHHHHHHTHHHHHHHCCHHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCCHHHHHHHHcc
Confidence 445555555554 589999999999999999999863
No 309
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=52.37 E-value=19 Score=24.59 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=30.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
.|.||+-|+++--.-|+.+..+.+++|..++..+
T Consensus 2 ~v~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i~~ 35 (74)
T d1r7ha_ 2 SITLYTKPACVQCTATKKALDRAGLAYNTVDISL 35 (74)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEEeCCCChhHHHHHHHHHHcCCceEEEEccC
Confidence 3789999999999999999999999999888754
No 310
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=51.36 E-value=29 Score=27.99 Aligned_cols=29 Identities=28% Similarity=0.232 Sum_probs=20.1
Q ss_pred EEEECCCCCcHHHHHHHHHHhc---CCCEEEE
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEA---GVPFYQM 90 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~---~~~~~~~ 90 (539)
+.+|=.+|=||||.|--+|-++ |..++.+
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~rV~iv 36 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGVV 36 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCCEEEEE
Confidence 5667678999999988776544 4444433
No 311
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=48.88 E-value=5.9 Score=34.41 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.8
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCC
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGV 85 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~ 85 (539)
.+++.|-..+|||||+.+|....+.
T Consensus 11 ~i~viGHVd~GKSTL~~~Ll~~~g~ 35 (222)
T d1zunb3 11 RFLTCGNVDDGKSTLIGRLLHDSKM 35 (222)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHcCC
Confidence 4788999999999999999877653
No 312
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=48.43 E-value=11 Score=30.59 Aligned_cols=58 Identities=19% Similarity=0.292 Sum_probs=39.0
Q ss_pred CceEEEECCCCC-cHHHHHHHHHHhc-CCCEEEEeCchhhHHHhhhhhHHHHHHHHHHHhCCCeEEEEeCcc
Q 009263 59 PHGVLLEGPPGC-GKTLVAKAIAGEA-GVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEID 128 (539)
Q Consensus 59 ~~giLL~GppGt-GKT~la~alA~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~a~~~~p~Il~iDEiD 128 (539)
|+.+.+.|.+|+ |+++ ...+.+.- ...++.+++. .++..+.++++...|..+++.+-+
T Consensus 2 pK~I~IlGsTGSIG~~t-L~Vi~~~~d~f~v~~lsa~-----------~N~~~L~~q~~ef~Pk~v~i~d~~ 61 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHST-LDLIERNLDRYQVIALTAN-----------RNVKDLADAAKRTNAKRAVIADPS 61 (150)
T ss_dssp CEEEEEETTTSHHHHHH-HHHHHHTGGGEEEEEEEES-----------SCHHHHHHHHHHTTCSEEEESCGG
T ss_pred CcEEEEECCCcHHHHHH-HHHHHcCCCCcEEEEEEeC-----------CCHHHHHHHHHhhccccceeccHH
Confidence 688999999997 6655 44444432 3445555543 245667888899999888887643
No 313
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=46.65 E-value=4.5 Score=35.80 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=23.3
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~ 84 (539)
++..+|.+.|-.+.|||+|+.+|...+|
T Consensus 22 k~~iNi~iiGHVD~GKSTL~~~Ll~~~g 49 (245)
T d1r5ba3 22 KEHVNIVFIGHVDAGKSTLGGNILFLTG 49 (245)
T ss_dssp CEEEEEEEEECGGGTHHHHHHHHHHHTT
T ss_pred CCceEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 4445789999999999999999976655
No 314
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.60 E-value=3.3 Score=37.53 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=19.5
Q ss_pred eEEEECCCCCcHHHHHHHHHHhc
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEA 83 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~ 83 (539)
-|-+.||.+||||+|+..+++..
T Consensus 34 vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 34 VVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp EEEEEEBTTSSHHHHHHHHTTCS
T ss_pred EEEEECCCCCCHHHHHHHHcCCC
Confidence 36689999999999999988643
No 315
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=46.11 E-value=6.9 Score=26.78 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCchhhHHHHHH
Q 009263 241 ARLAQLVQEAALVAVRKGHESILSSDMDDAVD 272 (539)
Q Consensus 241 ~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~ 272 (539)
--+..++.+|...|...++..|+.+|+..|++
T Consensus 34 ~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 34 EYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 34778889999999999999999999999975
No 316
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=44.45 E-value=12 Score=26.88 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHh
Q 009263 455 RDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495 (539)
Q Consensus 455 ~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il~ 495 (539)
++...|++.|=.+|+.+.+.|...|.....+++.++..|+.
T Consensus 3 k~~~~R~k~Lp~dy~~~y~~i~~YL~~~~~~~~~~~~~il~ 43 (82)
T d2o3la1 3 KMMMARVAALPEDYQFVFKKIQNYMWNFSAGNGMDMLHIQY 43 (82)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHHHHCCSCHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999988885
No 317
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.08 E-value=4.3 Score=32.71 Aligned_cols=17 Identities=29% Similarity=0.284 Sum_probs=12.8
Q ss_pred cccchhhhHHHHHHHHH
Q 009263 287 NQGQSRRAATEVGVAMI 303 (539)
Q Consensus 287 ~~~~~~~a~hEaGhAvv 303 (539)
......++.||+|||+=
T Consensus 103 ~~~~~~v~~HEiGHaLG 119 (157)
T d1hfca_ 103 EYNLHRVAAHELGHSLG 119 (157)
T ss_dssp SCBHHHHHHHHHHHHHT
T ss_pred cchhhhhHhhhhhhhcc
Confidence 34456789999999953
No 318
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=41.92 E-value=7.4 Score=34.87 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=22.1
Q ss_pred eEEEECCCCCcHHHHHHHHHHh----cCCCEEEEe
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGE----AGVPFYQMA 91 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~----~~~~~~~~~ 91 (539)
-+=|.|-|.+|||||-.++.+. .+.||.++.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~ti~ 38 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIE 38 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC------CCCCCC
T ss_pred eEEEECCCCCCHHHHHHHHHCCCCccccCCCCCCC
Confidence 3678999999999999999753 245665543
No 319
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.21 E-value=23 Score=31.38 Aligned_cols=49 Identities=16% Similarity=0.320 Sum_probs=30.0
Q ss_pred HhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCC
Q 009263 115 KVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLD 186 (539)
Q Consensus 115 ~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld 186 (539)
....+.+++|||+|.-. ++.....+..++..+. . +.-||.||..|..++
T Consensus 238 ~~~~~~~~~iDEpe~~L------------------hp~~~~~l~~~l~~~~---~--~~QviitTHsp~~~~ 286 (308)
T d1e69a_ 238 EIKPSPFYVLDEVDSPL------------------DDYNAERFKRLLKENS---K--HTQFIVITHNKIVME 286 (308)
T ss_dssp TTSCCSEEEEESCCSSC------------------CHHHHHHHHHHHHHHT---T--TSEEEEECCCTTGGG
T ss_pred hhccCchhhhhhccccC------------------CHHHHHHHHHHHHHhc---c--CCEEEEEECCHHHHH
Confidence 34566799999998632 2233444555555542 2 345566899887765
No 320
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.08 E-value=4.4 Score=33.19 Aligned_cols=14 Identities=21% Similarity=0.121 Sum_probs=11.1
Q ss_pred chhhhHHHHHHHHH
Q 009263 290 QSRRAATEVGVAMI 303 (539)
Q Consensus 290 ~~~~a~hEaGhAvv 303 (539)
...++.||+|||+=
T Consensus 114 ~~~v~~HEiGHaLG 127 (166)
T d1mmqa_ 114 FLYAATHELGHSLG 127 (166)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhhhhhccccC
Confidence 34688999999954
No 321
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.71 E-value=6.7 Score=34.50 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=22.2
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcC
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAG 84 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~ 84 (539)
-++.+.|-.+.|||||+.++.-.++
T Consensus 7 iNi~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 7 INVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHcC
Confidence 4799999999999999999987665
No 322
>d1i76a_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.55 E-value=4.8 Score=32.80 Aligned_cols=14 Identities=29% Similarity=0.088 Sum_probs=11.6
Q ss_pred chhhhHHHHHHHHH
Q 009263 290 QSRRAATEVGVAMI 303 (539)
Q Consensus 290 ~~~~a~hEaGhAvv 303 (539)
...++.||+|||+=
T Consensus 112 ~~~v~~HEiGHaLG 125 (163)
T d1i76a_ 112 LFLVAAHEFGHSLG 125 (163)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred heeehhhhhhhhhc
Confidence 46789999999954
No 323
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=40.02 E-value=4.7 Score=32.88 Aligned_cols=13 Identities=31% Similarity=0.286 Sum_probs=10.9
Q ss_pred chhhhHHHHHHHH
Q 009263 290 QSRRAATEVGVAM 302 (539)
Q Consensus 290 ~~~~a~hEaGhAv 302 (539)
...++.||+|||+
T Consensus 113 ~~~v~~HEiGHAL 125 (168)
T d1hy7a_ 113 LFLVAAHEIGHSL 125 (168)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ceeeeHhhhcccc
Confidence 3568999999996
No 324
>d2qdyb1 b.34.4.4 (B:1-211) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=39.70 E-value=23 Score=30.21 Aligned_cols=32 Identities=6% Similarity=0.204 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHhcccCHHHHHHHHhcCCC
Q 009263 468 HHAALLKTVKVLLNQKEIGREEIDFILNNYPP 499 (539)
Q Consensus 468 ~~~~l~~la~~Ll~~e~l~~~ei~~il~~~~~ 499 (539)
+..=|.+|...|++++.++.+||++......+
T Consensus 73 Ye~Wl~ale~lLvekG~it~~EL~~~~~~~~~ 104 (211)
T d2qdyb1 73 YERYVIGVATLMVEKGILTQDELESLAGGPFP 104 (211)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHhccccCCCc
Confidence 44567889999999999999999998875444
No 325
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.70 E-value=4.8 Score=32.94 Aligned_cols=15 Identities=27% Similarity=0.091 Sum_probs=11.9
Q ss_pred cchhhhHHHHHHHHH
Q 009263 289 GQSRRAATEVGVAMI 303 (539)
Q Consensus 289 ~~~~~a~hEaGhAvv 303 (539)
....++.||+|||+=
T Consensus 112 ~~~~v~~HEiGHaLG 126 (169)
T d1xuca1 112 NLFLVAAHEFGHSLG 126 (169)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred eeeeehhhhhccccC
Confidence 346789999999954
No 326
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=39.64 E-value=8.2 Score=32.30 Aligned_cols=22 Identities=32% Similarity=0.448 Sum_probs=19.7
Q ss_pred ceEEEECCCCCcHHHHHHHHHH
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAG 81 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~ 81 (539)
-+|-+.|-+..|||||+.+|.+
T Consensus 6 inIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 6 VNIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEEeccCCcHHHHHHHHHh
Confidence 3688999999999999999975
No 327
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=39.48 E-value=20 Score=31.79 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=28.2
Q ss_pred HhCCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCC
Q 009263 115 KVNKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLD 186 (539)
Q Consensus 115 ~~~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld 186 (539)
....++|++|||++.- .++.....+..++..+. ...+ -||.+|+.|..++
T Consensus 299 ~~~~~~illiDEpe~~------------------Lh~~~~~~l~~~l~~~~---~~~~-QviitTHs~~~~~ 348 (369)
T g1ii8.1 299 LAGEISLLILDEPTPY------------------LDEERRRKLITIMERYL---KKIP-QVILVSHDEELKD 348 (369)
T ss_dssp HHSSCSEEEEECCSSS------------------SCSHHHHHHHHHHHHTG---GGSS-EEEEEESCGGGGG
T ss_pred cCCCCCEEEEECCCCC------------------CCHHHHHHHHHHHHHHH---hcCC-EEEEEechHHHHH
Confidence 3456779999999863 22333444444555542 2222 3455788776543
No 328
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=39.15 E-value=19 Score=26.03 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhc
Q 009263 242 RLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTV 276 (539)
Q Consensus 242 dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~ 276 (539)
=|..+..+|...|...++..|+.+|+..|++...+
T Consensus 34 FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~~f 68 (89)
T d2bykb1 34 FAIFVTSSSTALAHKQNHKTITAKDILQTLTELDF 68 (89)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHCCc
Confidence 36677888889999999999999999999998654
No 329
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.62 E-value=5.1 Score=32.51 Aligned_cols=15 Identities=27% Similarity=0.100 Sum_probs=11.9
Q ss_pred cchhhhHHHHHHHHH
Q 009263 289 GQSRRAATEVGVAMI 303 (539)
Q Consensus 289 ~~~~~a~hEaGhAvv 303 (539)
....++.||+|||+=
T Consensus 116 ~~~~v~~HEiGHaLG 130 (169)
T d1rm8a_ 116 DLFLVAVHELGHALG 130 (169)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhc
Confidence 346789999999954
No 330
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.67 E-value=5.4 Score=32.16 Aligned_cols=14 Identities=43% Similarity=0.154 Sum_probs=11.2
Q ss_pred chhhhHHHHHHHHH
Q 009263 290 QSRRAATEVGVAMI 303 (539)
Q Consensus 290 ~~~~a~hEaGhAvv 303 (539)
...++.||+|||+=
T Consensus 109 ~~~~~~HEiGHaLG 122 (161)
T d1qiba_ 109 LFLVAAHEFGHAMG 122 (161)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hheeeeeccccccc
Confidence 45689999999953
No 331
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=36.99 E-value=11 Score=27.18 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHH
Q 009263 240 GARLAQLVQEAALVAVRKGHESILSSDMDDAVDRL 274 (539)
Q Consensus 240 ~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~ 274 (539)
-.-++.++++|..++...++..|+.+|+..|+.+.
T Consensus 40 ~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr~ 74 (82)
T d2huec1 40 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 74 (82)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHhc
Confidence 34577889999999999999999999999999753
No 332
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.42 E-value=4.8 Score=32.39 Aligned_cols=15 Identities=20% Similarity=0.146 Sum_probs=11.9
Q ss_pred cchhhhHHHHHHHHH
Q 009263 289 GQSRRAATEVGVAMI 303 (539)
Q Consensus 289 ~~~~~a~hEaGhAvv 303 (539)
....+++||+|||+=
T Consensus 106 ~~~~~~~HEiGHaLG 120 (158)
T d1y93a1 106 NLFLTAVHEIGHSLG 120 (158)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cHHHHhhhhhhhhcC
Confidence 446789999999953
No 333
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.33 E-value=20 Score=25.78 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHh
Q 009263 242 RLAQLVQEAALVAVRKGHESILSSDMDDAVDRLT 275 (539)
Q Consensus 242 dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~ 275 (539)
=|..+..+|...|...++..|+.+|+..|++...
T Consensus 37 Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~~ 70 (87)
T d1n1ja_ 37 FISFITSEASERCHQEKRKTINGEDILFAMSTLG 70 (87)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHcC
Confidence 3567778899999999999999999999998764
No 334
>d1hv5a_ d.92.1.11 (A:) Stromelysin-3 (MMP-11) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.17 E-value=4.9 Score=32.85 Aligned_cols=12 Identities=33% Similarity=0.365 Sum_probs=10.4
Q ss_pred hhhhHHHHHHHH
Q 009263 291 SRRAATEVGVAM 302 (539)
Q Consensus 291 ~~~a~hEaGhAv 302 (539)
..+++||+|||+
T Consensus 114 ~~v~~HEiGHaL 125 (162)
T d1hv5a_ 114 LQVAAHEFGHVL 125 (162)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhhhhhhhhhhc
Confidence 568999999994
No 335
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.63 E-value=15 Score=34.25 Aligned_cols=49 Identities=10% Similarity=0.243 Sum_probs=28.5
Q ss_pred CCCeEEEEeCcchhhhhhcCCcCCchhhhhhhhhhHHHHHHHHHHHHhcCCCCCCcEEEEEecCCCCcCCc
Q 009263 117 NKPSVIFIDEIDALATRRQGIFKDTTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRDLLDP 187 (539)
Q Consensus 117 ~~p~Il~iDEiD~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ld~~~~~~~vivIaatn~~~~ld~ 187 (539)
..+.+++|||+|.-. +......+..++..+. . .+.-+|.+|+.|..++.
T Consensus 353 ~~~pililDE~d~~L------------------d~~~~~~~~~~l~~~~---~-~~~Q~I~iTH~~~~~~~ 401 (427)
T d1w1wa_ 353 QPSPFFVLDEVDAAL------------------DITNVQRIAAYIRRHR---N-PDLQFIVISLKNTMFEK 401 (427)
T ss_dssp SCCSEEEESSTTTTC------------------CHHHHHHHHHHHHHHC---B-TTBEEEEECSCHHHHTT
T ss_pred CCCCEEEEeCCCCCC------------------CHHHHHHHHHHHHHHh---C-CCCEEEEEeCCHHHHHh
Confidence 344499999999743 2233444555555542 1 23356668887765544
No 336
>d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.43 E-value=5.7 Score=32.01 Aligned_cols=13 Identities=31% Similarity=0.194 Sum_probs=10.8
Q ss_pred chhhhHHHHHHHH
Q 009263 290 QSRRAATEVGVAM 302 (539)
Q Consensus 290 ~~~~a~hEaGhAv 302 (539)
...++.||+|||+
T Consensus 111 ~~~v~~HElGHaL 123 (159)
T d2ovxa1 111 LFLVAAHQFGHAL 123 (159)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eeeeehhhhcccc
Confidence 4568999999994
No 337
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.27 E-value=16 Score=25.72 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHH
Q 009263 242 RLAQLVQEAALVAVRKGHESILSSDMDDAVDRL 274 (539)
Q Consensus 242 dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~ 274 (539)
=+..++.+|...|.+.++..|+.+|+..|+...
T Consensus 34 Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~~ 66 (78)
T d1n1jb_ 34 FITELTLRAWIHTEDNKRRTLQRNDIAMAITKF 66 (78)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhcC
Confidence 366778889999999999999999999998753
No 338
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.03 E-value=22 Score=24.53 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHH
Q 009263 240 GARLAQLVQEAALVAVRKGHESILSSDMDDAVD 272 (539)
Q Consensus 240 ~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~ 272 (539)
-..|+.++++|........+..+|.+|+..|++
T Consensus 37 eYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 37 SIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 346889999999999888889999999999974
No 339
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=31.37 E-value=62 Score=22.20 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=30.6
Q ss_pred eEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 61 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 61 giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
.|-+|+-|+++=..-|+.+..+.+++|..++...
T Consensus 2 ~I~iys~~~Cp~C~~ak~~L~~~~i~y~~~di~~ 35 (82)
T d1fova_ 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDG 35 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred cEEEEeCCCCHhHHHHHHHHHHcCCCeEEEeccc
Confidence 4789999999999999999999999999988754
No 340
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.02 E-value=25 Score=27.42 Aligned_cols=30 Identities=17% Similarity=0.097 Sum_probs=21.2
Q ss_pred EEEECCCCCcHHHHHHHHHHh---cCCCEEEEe
Q 009263 62 VLLEGPPGCGKTLVAKAIAGE---AGVPFYQMA 91 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~---~~~~~~~~~ 91 (539)
-+++||-.+|||+-.-..++. .+..++.++
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ik 37 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIK 37 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 478899999999965555443 366666654
No 341
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=29.98 E-value=26 Score=27.68 Aligned_cols=69 Identities=19% Similarity=0.171 Sum_probs=37.7
Q ss_pred EEEECCCCCcHHHHHHHHHH---hcCCCEEEEeCch---hhHH----Hhhh-----hhHHHHHHHHHHHhCCCeEEEEeC
Q 009263 62 VLLEGPPGCGKTLVAKAIAG---EAGVPFYQMAGSE---FVEV----LVGV-----GSARIRDLFKRAKVNKPSVIFIDE 126 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~---~~~~~~~~~~~~~---~~~~----~~g~-----~~~~~~~~f~~a~~~~p~Il~iDE 126 (539)
=+++||-.+|||+-.-..++ ..+..++.++... +... ..|. .......++... ...+.+|+|||
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~~~D~Ry~~~~i~sh~g~~~~a~~~~~~~~~~~~~-~~~~dvI~IDE 88 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYF-EEDTEVIAIDE 88 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC-------CEEECTTSCEEECEEESSSTHHHHHC-CTTCSEEEECS
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEEeccccccccceeeecccceEEEEEecchhhhhhhh-cccccEEEEee
Confidence 56899999999995555544 3477776665321 0000 0000 001122233322 34578999999
Q ss_pred cchhh
Q 009263 127 IDALA 131 (539)
Q Consensus 127 iD~l~ 131 (539)
++-+.
T Consensus 89 ~QFf~ 93 (141)
T d1xx6a1 89 VQFFD 93 (141)
T ss_dssp GGGSC
T ss_pred hhhcc
Confidence 98763
No 342
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=29.59 E-value=85 Score=23.26 Aligned_cols=18 Identities=11% Similarity=0.006 Sum_probs=12.5
Q ss_pred CCCCHHHHHHHHHHHhcc
Q 009263 202 RAPNAKGRTEILKIHASK 219 (539)
Q Consensus 202 ~~P~~~er~~il~~~l~~ 219 (539)
.+.+.++..+.++..+++
T Consensus 104 KP~~~~~L~~~i~~~l~r 121 (123)
T d1mb3a_ 104 KPISVVHFLETIKRLLER 121 (123)
T ss_dssp SSCCHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 345778888877777754
No 343
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.28 E-value=8.6 Score=35.66 Aligned_cols=18 Identities=39% Similarity=0.582 Sum_probs=14.8
Q ss_pred EEEEC--CCCCcHHHHHHHH
Q 009263 62 VLLEG--PPGCGKTLVAKAI 79 (539)
Q Consensus 62 iLL~G--ppGtGKT~la~al 79 (539)
..+.| |++||||.||-..
T Consensus 19 ~yvaaAFPSaCGKTnlAMl~ 38 (363)
T d1khba1 19 KYLAAAFPSACGKTNLAMMN 38 (363)
T ss_dssp EEEEEECCTTSCHHHHHTCC
T ss_pred EEEEEecCccccchhHHHhC
Confidence 66776 9999999999853
No 344
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=28.18 E-value=1.5e+02 Score=24.29 Aligned_cols=64 Identities=22% Similarity=0.310 Sum_probs=42.4
Q ss_pred CCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhhhh-hHHHHHHHHHHHhCCCeEEEEeCcchhhh
Q 009263 66 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVG-SARIRDLFKRAKVNKPSVIFIDEIDALAT 132 (539)
Q Consensus 66 GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~f~~a~~~~p~Il~iDEiD~l~~ 132 (539)
|..|||=+..+-.+|++.+.+++.+-.--|. +.|.. ...-.+-++..+...-++++||+ |.|..
T Consensus 96 GgTGtgaapviA~~ake~g~lvv~ivtlPF~--~EG~~r~~~A~~gl~~L~~~~D~~Ivi~N-d~L~~ 160 (194)
T d1w5fa1 96 GGTGTGASPVIAKIAKEMGILTVAIVTTPFY--FEGPERLKKAIEGLKKLRKHVDTLIKISN-NKLME 160 (194)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEEEECCG--GGCHHHHHHHHHHHHHHHHTCSEEEEEEH-HHHHT
T ss_pred CCcccchHHHHHHHHHHcCCceEEEEeechh--hhHHHHHHHHHHHHHHHHHHhhhhheehH-HHHHH
Confidence 7788888888888999999887765433332 12211 12233456667777788999998 66654
No 345
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=26.53 E-value=73 Score=21.31 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=31.4
Q ss_pred ceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCch
Q 009263 60 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 94 (539)
Q Consensus 60 ~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~ 94 (539)
..|.||+-||++=..-|+.+..+.++++..++...
T Consensus 5 ~~I~iYs~~~C~~C~~ak~lL~~~~i~~~~~~v~~ 39 (74)
T d1nm3a1 5 ESISIFTKPGCPFCAKAKQLLHDKGLSFEEIILGH 39 (74)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHTCCCEEEETTT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHcCCCeEEEEccC
Confidence 45899999999999999999999999999887654
No 346
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio parahaemolyticus [TaxId: 670]}
Probab=26.49 E-value=1.2e+02 Score=24.63 Aligned_cols=56 Identities=18% Similarity=0.120 Sum_probs=47.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHh
Q 009263 440 FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495 (539)
Q Consensus 440 ~~~~~~~~~~v~~ll~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il~ 495 (539)
+.++++...++-..+.+..+.|+.-++..|.....-.+.+...+.++.|+...+..
T Consensus 103 P~lT~E~R~elvK~~k~~~E~akv~iRniRr~~~~~ikk~~k~~~iseD~~k~~~~ 158 (185)
T d1is1a_ 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQE 158 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHhHHHHHHH
Confidence 55778888888899999999999999999988877778888888999987776654
No 347
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.47 E-value=35 Score=23.30 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=40.1
Q ss_pred HHHHHHhccCCCCCCCC--HHHHHhhCCCCCHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHH
Q 009263 211 EILKIHASKVKMSDSVD--LSSYAKNLPGWTGARLAQLVQEAALVAVRKGHESILSSDMDDAVDR 273 (539)
Q Consensus 211 ~il~~~l~~~~~~~~~~--~~~la~~t~g~s~~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~ 273 (539)
+++...++..++..-.. ...+. .|.-+-...++.+|..++.-.++..|+.+|++-|+..
T Consensus 5 ~~i~~iL~~~GV~~yeprV~~qlL----ef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~~ 65 (68)
T d1tafa_ 5 QVIMSILKELNVQEYEPRVVNQLL----EFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEV 65 (68)
T ss_dssp HHHHHHHHHTTCCCBCTHHHHHHH----HHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCccccHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHh
Confidence 34455565555543211 22222 2345677788999999999999999999999999864
No 348
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.88 E-value=11 Score=32.93 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=10.5
Q ss_pred hhhhHHHHHHHHH
Q 009263 291 SRRAATEVGVAMI 303 (539)
Q Consensus 291 ~~~a~hEaGhAvv 303 (539)
..+++||+||||=
T Consensus 171 ~~t~lHEIGHaLG 183 (246)
T d1kapp2 171 RQTLTHEIGHTLG 183 (246)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 4579999999953
No 349
>d3crda_ a.77.1.3 (A:) Raidd CARD domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.80 E-value=26 Score=25.73 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=28.2
Q ss_pred HHHHHHhHHHHH-------HHHHHHHHhcccCHHHHHHHHhc
Q 009263 462 VTLLRRHHAALL-------KTVKVLLNQKEIGREEIDFILNN 496 (539)
Q Consensus 462 ~~ll~~~~~~l~-------~la~~Ll~~e~l~~~ei~~il~~ 496 (539)
+++|+.||..|- .|-+.|..++.|+.+|++.|...
T Consensus 6 r~iL~~~r~~Lv~~l~~~~~vld~L~~~~vlt~~e~e~I~~~ 47 (100)
T d3crda_ 6 KQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQ 47 (100)
T ss_dssp HHHHHHHHHHHHHSSCSSCSSHHHHHHHTSSCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCChhHHHHHHHHCCCCCHHHHHHHHcC
Confidence 566777777665 47789999999999999999653
No 350
>d3ygsp_ a.77.1.3 (P:) Procaspase 9 prodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.07 E-value=39 Score=24.33 Aligned_cols=35 Identities=29% Similarity=0.241 Sum_probs=27.9
Q ss_pred HHHHHHhHHHH------HHHHHHHHHhcccCHHHHHHHHhc
Q 009263 462 VTLLRRHHAAL------LKTVKVLLNQKEIGREEIDFILNN 496 (539)
Q Consensus 462 ~~ll~~~~~~l------~~la~~Ll~~e~l~~~ei~~il~~ 496 (539)
+++|+.|+..| ..|.+.|+.+..|+.++.+.|-..
T Consensus 7 r~~L~~~r~~Lv~~l~~~~vl~~L~~~~vlt~~~~e~I~~~ 47 (97)
T d3ygsp_ 7 RRLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQRA 47 (97)
T ss_dssp HHHHHHTHHHHHHHCCCTTTHHHHHHTTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHcCCcCHHHHHHHHhc
Confidence 35566666665 478999999999999999999764
No 351
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=24.99 E-value=1.8e+02 Score=24.10 Aligned_cols=65 Identities=20% Similarity=0.245 Sum_probs=43.0
Q ss_pred CCCCCcHHHHHHHHHHhcCCCEEEEeCchhhHHHhhhhh-HHHHHHHHHHHhCCCeEEEEeCcchhhhh
Q 009263 66 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGS-ARIRDLFKRAKVNKPSVIFIDEIDALATR 133 (539)
Q Consensus 66 GppGtGKT~la~alA~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~f~~a~~~~p~Il~iDEiD~l~~~ 133 (539)
|-.|||=+.++.-+|++.+.+++.+-.--|.. .|... .+-..-++..+...-++++||+ |.|...
T Consensus 111 GGTGsgaapvia~~ake~g~lvv~ivtlPF~~--EG~~r~~~A~~~l~~l~~~~d~~Ivi~N-d~L~~~ 176 (209)
T d2vapa1 111 GGTGTGSAPVVAEISKKIGALTVAVVTLPFVM--EGKVRMKNAMEGLERLKQHTDTLVVIPN-EKLFEI 176 (209)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEEEECCGG--GCHHHHHHHHHHHHHHHTTCSEEEEEEG-GGHHHH
T ss_pred CCccccHHHHHHHHHHHcCCcEEEEEecchhh--hhHHHHHHHHHHHHHHHHhhcceEeccc-HHHHHh
Confidence 67888888888889999998877654333321 12111 2223446677777888999998 777643
No 352
>d1g9ka2 d.92.1.6 (A:3-244) Metalloprotease {Pseudomonas sp., tac ii 18 [TaxId: 306]}
Probab=24.81 E-value=12 Score=32.55 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=10.8
Q ss_pred chhhhHHHHHHHH
Q 009263 290 QSRRAATEVGVAM 302 (539)
Q Consensus 290 ~~~~a~hEaGhAv 302 (539)
...+++||+|||+
T Consensus 161 ~~~t~~HEIGHaL 173 (242)
T d1g9ka2 161 GRQTLTHEIGHTL 173 (242)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhh
Confidence 4568899999996
No 353
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.65 E-value=40 Score=26.34 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhc
Q 009263 242 RLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTV 276 (539)
Q Consensus 242 dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~ 276 (539)
=|..+..+|...|...++.+|+.+|+..|++.+-.
T Consensus 38 Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~~f 72 (135)
T d1jfib_ 38 FIHLISSEANEICNKSEKKTISPEHVIQALESLGF 72 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCc
Confidence 46677888999999999999999999999998754
No 354
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.65 E-value=28 Score=29.13 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=21.6
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCC
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 86 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~ 86 (539)
..++.++|.|| ||+++.+.|.++..-.
T Consensus 7 ~~~Rpivi~Gp---~K~ti~~~L~~~~p~~ 33 (199)
T d1kjwa2 7 HYARPIIILGP---TKDRANDDLLSEFPDK 33 (199)
T ss_dssp CSCCCEEEEST---THHHHHHHHHHHCTTT
T ss_pred CCCCCEEEECc---CHHHHHHHHHHhCccc
Confidence 34678999998 5999999999976433
No 355
>d1sata2 d.92.1.6 (A:4-246) Metalloprotease {Serratia marcescens [TaxId: 615]}
Probab=24.25 E-value=13 Score=32.53 Aligned_cols=12 Identities=25% Similarity=0.434 Sum_probs=10.0
Q ss_pred hhhhHHHHHHHH
Q 009263 291 SRRAATEVGVAM 302 (539)
Q Consensus 291 ~~~a~hEaGhAv 302 (539)
..+++||+|||+
T Consensus 168 ~~t~lHEIGHaL 179 (243)
T d1sata2 168 RQTFTHEIGHAL 179 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 457899999994
No 356
>d1k7ia2 d.92.1.6 (A:18-258) Metalloprotease {Erwinia chrysanthemi [TaxId: 556]}
Probab=24.04 E-value=12 Score=32.60 Aligned_cols=12 Identities=25% Similarity=0.434 Sum_probs=10.0
Q ss_pred hhhhHHHHHHHH
Q 009263 291 SRRAATEVGVAM 302 (539)
Q Consensus 291 ~~~a~hEaGhAv 302 (539)
..+++||+|||+
T Consensus 166 ~~t~~HEIGHaL 177 (241)
T d1k7ia2 166 RQTFTHEIGHAL 177 (241)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 457899999994
No 357
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=23.78 E-value=33 Score=27.40 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHhc
Q 009263 241 ARLAQLVQEAALVAVRKGHESILSSDMDDAVDRLTV 276 (539)
Q Consensus 241 ~dl~~lv~~A~~~A~~~~~~~I~~~d~~~a~~~~~~ 276 (539)
.-+..++.+|..+|...++..|+.+|+..|+....+
T Consensus 111 ~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~~~ 146 (151)
T d1f1ea_ 111 RATEELGEKAAEYADEDGRKTVQGEDVEKAITYSMP 146 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHcCC
Confidence 357788899999999999999999999999988765
No 358
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.93 E-value=93 Score=23.60 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=25.0
Q ss_pred CCCCcEEEEEecCCCCcCCccccCCCccceeeecCCCCHHHHHHHHHHHhcc
Q 009263 168 DTGKGVIFLAATNRRDLLDPALLRPGRFDRKIRIRAPNAKGRTEILKIHASK 219 (539)
Q Consensus 168 ~~~~~vivIaatn~~~~ld~al~r~gRf~~~i~v~~P~~~er~~il~~~l~~ 219 (539)
.....++++.+....+....++.. |-.+ .+ ..+-+.++..+.++..+..
T Consensus 74 ~~~~~vivlt~~~~~~~~~~a~~~-Ga~~-yl-~Kp~~~~~L~~~i~~v~~g 122 (138)
T d1a04a2 74 SLSGRIVVFSVSNHEEDVVTALKR-GADG-YL-LKDMEPEDLLKALHQAAAG 122 (138)
T ss_dssp CCCSEEEEEECCCCHHHHHHHHHT-TCSE-EE-ETTCCHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEEEECCHHHHHHHHHc-CCCE-EE-ECCCCHHHHHHHHHHHHCC
Confidence 344556666555555544444432 3222 12 2234666777777666654
No 359
>d1dd5a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermotoga maritima [TaxId: 2336]}
Probab=22.44 E-value=1.7e+02 Score=23.77 Aligned_cols=56 Identities=11% Similarity=0.058 Sum_probs=46.1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHh
Q 009263 440 FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFILN 495 (539)
Q Consensus 440 ~~~~~~~~~~v~~ll~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il~ 495 (539)
+.++++...++-..+.+.++.|+.-++..|.....-.+.+.....++.|++.....
T Consensus 102 P~lT~E~R~elvK~~k~~~E~aKv~iR~iR~~~~~~lk~~~k~~~iseD~~k~~~~ 157 (184)
T d1dd5a_ 102 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLEN 157 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhHHHHHHH
Confidence 45678888888899999999999999999888877777777778899987766543
No 360
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.40 E-value=14 Score=25.17 Aligned_cols=29 Identities=17% Similarity=0.397 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCchhhHHHHH
Q 009263 243 LAQLVQEAALVAVRKGHESILSSDMDDAV 271 (539)
Q Consensus 243 l~~lv~~A~~~A~~~~~~~I~~~d~~~a~ 271 (539)
+..++..|...|...++..|+.+|+..|+
T Consensus 37 i~~l~~~A~~~a~~~krktI~~~dl~~ai 65 (66)
T d1jfia_ 37 LESLLKKACQVTQSRNAKTMTTSHLKQCI 65 (66)
T ss_dssp HHHHHHHHHHHHHTC---CBCHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCcCCHHHHHHHh
Confidence 56777888888888888999999998775
No 361
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia coli [TaxId: 562]}
Probab=22.18 E-value=1.7e+02 Score=23.74 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=45.3
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHH
Q 009263 440 FNLDDDIAWRTEELLRDMYGRTVTLLRRHHAALLKTVKVLLNQKEIGREEIDFIL 494 (539)
Q Consensus 440 ~~~~~~~~~~v~~ll~~~~~~a~~ll~~~~~~l~~la~~Ll~~e~l~~~ei~~il 494 (539)
+.++++...++-..+.+..+.|+.-++.-|.....-.+.+...+.++.|++....
T Consensus 103 P~lT~E~R~elvK~~k~~~E~~kv~iR~iRr~~~~~ik~~~k~~~iseD~~k~~~ 157 (185)
T d1ek8a_ 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQ 157 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCChhHHHHHH
Confidence 4567888888888899999999999999988777777888888899998666554
No 362
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.00 E-value=45 Score=24.91 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=28.9
Q ss_pred EEEECCCCCcHHHHHHHHHHhcCCCEEEEeCc
Q 009263 62 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 93 (539)
Q Consensus 62 iLL~GppGtGKT~la~alA~~~~~~~~~~~~~ 93 (539)
+.|||-|.|+|+-=|..+..+.|.+|-.++.-
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~~i~~~~idy~ 33 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHDYK 33 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCeEEEEcc
Confidence 67999999999999999999999999887643
No 363
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=20.02 E-value=51 Score=23.83 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=26.3
Q ss_pred CCCceEEEECCCCCcHHHHHHHHHHhcCCCEEEEeCchh
Q 009263 57 KPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEF 95 (539)
Q Consensus 57 ~~~~giLL~GppGtGKT~la~alA~~~~~~~~~~~~~~~ 95 (539)
...+.+.|.|--|+|-+.||+.+.+. |. .+++++.
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~-G~---~VsGSD~ 40 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNE-GY---QISGSDI 40 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH-TC---EEEEEES
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhC-CC---EEEEEeC
Confidence 44567999999999999999988774 43 4555553
Done!