BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009266
(538 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1
SV=1
Length = 591
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 234/417 (56%), Gaps = 52/417 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 147 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 204
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 205 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 264
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 265 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 324
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D+Y R+YD RK D + + G FCP +L
Sbjct: 325 K------VGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKI--DENENNG-VLKKFCPHHL 375
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 410
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 411 SHSDGAQ----------YIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 460
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQVL 430
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A+ +T T +++V+
Sbjct: 461 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP-TAEASTELTGLKEVI 516
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 233/417 (55%), Gaps = 52/417 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 153 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 210
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 211 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 270
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 271 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 330
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK D + + G FCP +L
Sbjct: 331 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI--DENENNG-VLKKFCPHHL 381
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 382 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 416
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 417 SHSDGAQ----------YVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 466
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQVL 430
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A+ +T T ++ V+
Sbjct: 467 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP-TAEASTELTGLKDVI 522
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 233/417 (55%), Gaps = 52/417 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 147 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 204
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 205 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 264
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 265 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 324
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK D + + G FCP +L
Sbjct: 325 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI--DENENNG-VLKKFCPHHL 375
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 410
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 411 SHSDGAQ----------YIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 460
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQVL 430
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A+ +T T ++ V+
Sbjct: 461 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPT-AEASTELTGLKDVI 516
>sp|Q6NRH1|DCAF8_XENLA DDB1- and CUL4-associated factor 8 OS=Xenopus laevis GN=dcaf8 PE=2
SV=1
Length = 601
Score = 275 bits (704), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 235/443 (53%), Gaps = 67/443 (15%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + R++G S+ F + V R + LD H GCVNT+ FN G L S
Sbjct: 156 RALSALRQRQMG--SSTRFIYEACGARGFVQRFHLLHGLDGHSGCVNTLHFNQRGTCLAS 213
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 214 GSDDLKVVVWDWVRRKPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 273
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A+ L + +
Sbjct: 274 HCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKES 333
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N FAV G D++ R+YD RK + + + FCP +L
Sbjct: 334 K------VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKK---FCPHHL 384
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D SELL SYNDE IYLF S+ S+ +E
Sbjct: 385 VTSEAKANITCLVYSHDGSELLASYNDEDIYLFN---------------SSHSDGAEY-- 427
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
+ YKGHRN TVKGVNF+GP+ E+VVSGSDCG IF+W+K
Sbjct: 428 ------------------IKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSS 469
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQV---- 429
++++ ++ D+ VVNC+EPHPH VLA+SG++ D+KI P A + L E +
Sbjct: 470 CQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKEPTELDGLKEVIKKNK 529
Query: 430 ------------LIPDHIRWFAL 440
L +H+ WF +
Sbjct: 530 RERDEDSLHHTDLFDNHMLWFLM 552
>sp|Q5R448|DCAF8_PONAB DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2
SV=1
Length = 597
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/417 (40%), Positives = 233/417 (55%), Gaps = 52/417 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 153 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 210
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ A DGQVR A++
Sbjct: 211 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMRARDGQVRVAELSAT 270
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 271 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 330
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK D + + G FCP +L
Sbjct: 331 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI--DENENNG-VLKKFCPHHL 381
Query: 257 I-GDEQVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ G+ + IT L +S D +ELL SYNDE IYLF S
Sbjct: 382 VNGESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 416
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 417 SHSDGAQ----------YVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 466
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQVL 430
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A+ +T T ++ V+
Sbjct: 467 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP-TAEASTELTGLKDVI 522
>sp|Q28I90|DCAF8_XENTR DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis GN=dcaf8
PE=2 SV=1
Length = 604
Score = 269 bits (687), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 234/443 (52%), Gaps = 67/443 (15%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + R++G S+ F + V R + LD H GCVNT+ FN G L S
Sbjct: 159 RALRALRQRQMG--SSTRFIYDACGARGFVQRFRLLHGLDGHSGCVNTLHFNQRGTWLAS 216
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 217 GSDDLKVVVWDWVRRKPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 276
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELFTCRPIDD 196
+ TK + +H+G +HKLA+E SP F + GED +V DLR A+ L + +
Sbjct: 277 HCCKNTKRVAQHKGASHKLALERDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKEK 336
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N FAV G D++ R+YD RK + + + FCP +L
Sbjct: 337 K------VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKK---FCPHHL 387
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D SELL SYNDE IYLF S+ S+ +E
Sbjct: 388 VTSEAKANITCLVYSHDGSELLASYNDEDIYLFN---------------SSHSDGAEY-- 430
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
+ YKGHRN TVKGVNF+GP+ E+VVSGSDCG IF+W+K
Sbjct: 431 ------------------IKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSS 472
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQV---- 429
++++ ++ D+ VVNC+EPHPH VLA+SG++ D+KI P A + L E +
Sbjct: 473 CQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKEPTELNGLKEVIKKNK 532
Query: 430 ------------LIPDHIRWFAL 440
L +H+ WF +
Sbjct: 533 RERDEDSLHHTDLFDNHMLWFLM 555
>sp|P0C7V8|DC8L2_HUMAN DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens
GN=DCAF8L2 PE=2 SV=1
Length = 602
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 228/424 (53%), Gaps = 55/424 (12%)
Query: 12 RARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNT 71
R R V AL R+LG S F + V R + +L H GCVNTV FN
Sbjct: 155 RPRWQVVTALHQ---RQLG--SRPRFVYEACGARAFVQRFRLQYRLADHVGCVNTVHFNQ 209
Query: 72 DGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVR 131
G L S DD +VI+WDW +R L+F SGH +NVFQAK +P D ++ CA DGQVR
Sbjct: 210 RGTRLASSGDDLKVIVWDWVRQRPVLNFESGHTNNVFQAKFLPNCGDSTLAMCARDGQVR 269
Query: 132 HAQILERGGV-ETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELF 189
A+++ TK + +H+G AHKLA+EP SP+ F T GED +V DLR A+++
Sbjct: 270 VAELINASYFNNTKCVAQHRGPAHKLALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVV 329
Query: 190 TCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPAD 249
R D + V L I ++P N FAV G D++ R+YD RK D + G
Sbjct: 330 VTRENDKK------VGLYTITVNPANTYQFAVGGQDQFVRIYDQRKI--DKKENNG-VLK 380
Query: 250 YFCPPNLIG-DEQVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRS 307
F P +L+ D IT + +S D +ELL SYND+ IYLF
Sbjct: 381 KFTPHHLVNCDFPTNITCVVYSHDGTELLASYNDDDIYLFN------------------- 421
Query: 308 EASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRI 367
S H+ A S + +KGHRN TVKGVNF+GP+ E+VVSGSDCG I
Sbjct: 422 ------SSHSDGAQYS----------KRFKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHI 465
Query: 368 FIWKKKGGELIRVIEADRH-VVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNI 426
F W+K ++I+ ++ R +NC+EPHP+ VLA SG++ D+KI TP A AT T +
Sbjct: 466 FFWEKSSCQIIQFLKGSREGTINCLEPHPYLPVLACSGLDHDVKIWTP-TAKAATELTGL 524
Query: 427 EQVL 430
++V+
Sbjct: 525 KKVI 528
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 224/424 (52%), Gaps = 55/424 (12%)
Query: 12 RARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNT 71
R+R V AL R+LG S+ F + V R + L H G V+T+ FN
Sbjct: 152 RSRWQVLTALRQ---RQLG--SSARFVYEACGARTFVQRFRLQYLLGSHAGSVSTIHFNQ 206
Query: 72 DGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVR 131
G L S DD RVI+WDW ++ L+F SGH+ NV QAK P D ++ C DGQVR
Sbjct: 207 RGTRLASSGDDLRVIVWDWVRQKPVLNFESGHDINVIQAKFFPNCGDSTLAMCGHDGQVR 266
Query: 132 HAQILERGGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRT-GAATELF 189
A+++ E TK + KH+G AH+LA+EP SP+ F T GED +V DLR A+++
Sbjct: 267 VAELINASYCENTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVV 326
Query: 190 TCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPAD 249
R D + V L I+++P N FAV G D++ R+YD R+ D + G
Sbjct: 327 VTRENDKK------VGLYTISMNPANIYQFAVGGHDQFVRIYDQRRI--DKKENNG-VLK 377
Query: 250 YFCPPNLI-GDEQVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRS 307
F P +L+ D IT + +S D +ELL SYNDE IYLF + G
Sbjct: 378 KFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQ----------- 426
Query: 308 EASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRI 367
+ YKGHRN T+K VNF+GP+ E+VVSGSDCG +
Sbjct: 427 ------------------------YVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHV 462
Query: 368 FIWKKKGGELIRVIEADRH-VVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNI 426
F W+K ++I+ +E DR +VNC+EPHP+ VLA+SG++ ++I TP A AT T +
Sbjct: 463 FFWEKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIWTPTAKT-ATELTGL 521
Query: 427 EQVL 430
+ V+
Sbjct: 522 KDVI 525
>sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1
SV=1
Length = 876
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 16 SVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDI 75
S L DV R LG R + + RL + A L+ H GCVNT+ +N G+
Sbjct: 6 SCPHLLWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEY 65
Query: 76 LISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQI 135
++SGSDD ++++ + + +V + SGH N+F AK +P TDD+ IV+C+ DG + + I
Sbjct: 66 ILSGSDDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTDDKQIVSCSGDGVIFYTNI 125
Query: 136 LERGGVETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCR-- 192
+ + H G +++ P P+ F +CGEDG V+ FD R + C+
Sbjct: 126 EQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDD 185
Query: 193 -PIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKY------KWDGSTDFG 245
I+ RR +V AI P AV SD R+YD R + G G
Sbjct: 186 ILINCRRAATSV------AICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTG 239
Query: 246 QPADYFCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
A + P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 240 MVARFI--PSHLSNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 717 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 774
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
AD HVVNC++PHP +LASSGI+ DIKI +P
Sbjct: 775 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSP 806
>sp|Q5R9B8|DCAF6_PONAB DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2
SV=2
Length = 860
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 16 SVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDI 75
S L DV R LG R + + RL + A L+ H GCVNT+ +N G+
Sbjct: 6 SCPHLLWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEY 65
Query: 76 LISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQI 135
++SGSDD ++++ + + +V + SGH N+F AK +P T+D+ IV+C+ DG + + +
Sbjct: 66 ILSGSDDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNV 125
Query: 136 LERGGVETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCR-- 192
+ + H G +++ P P+ F +CGEDG V+ FD R + C+
Sbjct: 126 EQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDD 185
Query: 193 -PIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKY------KWDGSTDFG 245
I+ RR +V AI P AV SD R+YD R + G G
Sbjct: 186 ILINCRRAATSV------AICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTG 239
Query: 246 QPADYFCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
A + P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 240 MVARFI--PSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 701 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 758
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTPNAADR 419
AD HVVNC++PHP +LASSGI+ DIKI +P R
Sbjct: 759 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSPLEESR 795
>sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1
PE=1 SV=2
Length = 677
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 13 ARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTD 72
A+ ++ + L+ ++E G LS F R ++ + RLG+ A+L H GCVN + +N
Sbjct: 2 AKVNITRDLIRRQIKERGALS---FERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEK 58
Query: 73 GDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRH 132
GD+L SGSDD+ I+WD + LS H+GH N+F K +P DR ++T AAD +V
Sbjct: 59 GDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHV 118
Query: 133 AQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAA-TELFTC 191
+ + + + G H R ++A P P+ F++ EDGL++ +DLR + +E+
Sbjct: 119 HDLTVKETIH--MFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVL-- 174
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
ID +V + ++P++ N AV S + RLYDIR
Sbjct: 175 --IDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 336 YKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPH 394
Y GH N T +K NFFG +Y+VSGSD G FIW+K+ L+RV++ D +VNC++PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 395 PHSTVLASSGIESDIKILTP 414
P LA+SGI+ +++ P
Sbjct: 590 PSYCFLATSGIDPVVRLWNP 609
>sp|Q58WW2|DCAF6_HUMAN DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1
SV=1
Length = 860
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 138/278 (49%), Gaps = 19/278 (6%)
Query: 21 LVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILISGS 80
L DV R LG R + + RL + A L+ H GCVNT+ +N G+ ++SGS
Sbjct: 11 LWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGS 70
Query: 81 DDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGG 140
DD ++++ + + +V + SGH N+F AK +P T+D+ IV+C+ DG + + + +
Sbjct: 71 DDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAE 130
Query: 141 VETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCR---PIDD 196
+ H G +++ P P+ F +CGEDG V+ FD R + C+ I+
Sbjct: 131 TNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINC 190
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKY------KWDGSTDFGQPADY 250
RR +V AI P AV SD R+YD R + G G A +
Sbjct: 191 RRAATSV------AICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARF 244
Query: 251 FCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 245 I--PSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 701 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 758
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTPNAADR 419
AD HVVNC++PHP +LASSGI+ DIKI +P R
Sbjct: 759 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSPLEESR 795
>sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1
PE=1 SV=1
Length = 677
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 13 ARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTD 72
A+ ++ + L+ ++E G LS F R ++ + RLG+ A+L H GCVN + +N
Sbjct: 2 AKVNITRDLIRRQVKERGALS---FERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEK 58
Query: 73 GDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRH 132
GD+L SGSDD+ I+WD + LS H+GH N+F K +P DR ++T AAD +V
Sbjct: 59 GDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHV 118
Query: 133 AQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAA-TELFTC 191
+ + + + G H R ++A P P+ F++ EDGL++ +DLR + +E+
Sbjct: 119 HDLTVKETIH--MFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVL-- 174
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
ID +V + ++P++ N AV S + RLYDIR
Sbjct: 175 --IDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 336 YKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPH 394
Y GH N T +K NFFG +Y+VSGSD G FIW+K+ L+RV++ D +VNC++PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 395 PHSTVLASSGIESDIKILTP 414
P LA+SGI+ +++ P
Sbjct: 590 PSYCFLATSGIDPVVRLWNP 609
>sp|O94527|IQW1_SCHPO WD repeat protein iqw1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iqw1 PE=1 SV=1
Length = 809
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 35/290 (12%)
Query: 29 LGQLSTRNFALRRRASEDL------VLRLGIYAKLDKHRGCVNTVSFNTDGDILISGSDD 82
L QL R++ +R+ S D+ + + + +L H GCVNT+ ++ DG+ L+SGSDD
Sbjct: 8 LRQLDYRDW-FQRKISRDIYGNSTWLTGIDLQKELTGHTGCVNTLDWSADGEFLLSGSDD 66
Query: 83 RRVILWDWKTE-RVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQI--LERG 139
R+I+WD E + + +GH N+F AK +P++++R I++ + D ++ + + G
Sbjct: 67 TRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEG 126
Query: 140 GVETKLLGKHQGRAHKLAIEPGSP-------HVFYTCGEDGLVQHFDLR-TGAATELFTC 191
G++ + + Q R A++ H F C EDG + +D+R + C
Sbjct: 127 GMDHGM--ETQTRCWSCALDSVKNIVPCDNGHTFLVCSEDGTARQYDIREPHVCNQDLDC 184
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYK------WDGSTDFG 245
I N +NL I + P N FA+ G+ Y LYD R K W +T
Sbjct: 185 PSILVNYNPYR-INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPE 243
Query: 246 Q--------PADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDEFIYLF 287
+ D C I D + + ++ +ELLVS+N +++YLF
Sbjct: 244 KDCRCVRKFSPDGSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLF 293
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%)
Query: 326 NTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADR 385
N V + Y GH N ++K VNF+G EYV+SGSD GR FIW K ++ +I D
Sbjct: 654 NVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDS 713
Query: 386 HVVNCIEPHPHSTVLASSGIESDIKIL 412
VN IE HP LA SGI+S +KI
Sbjct: 714 EAVNVIEGHPRCPTLAVSGIDSTVKIF 740
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 84/401 (20%)
Query: 32 LSTRNFALRR-RASEDLVLRLGIYAK-LDKHRGCVNTVSF-NTDGDILISGSDDRRVILW 88
L T++F RR R +L Y K L H GCVN + F N G L+SG DDRRV+LW
Sbjct: 28 LLTQDFQRRRLRGCRNL------YKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLW 81
Query: 89 DWKT---ERVK-LSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETK 144
+ RVK + H+ N+F + F + V + G + + ET
Sbjct: 82 HMEQAIHSRVKPIQLKGEHHSNIF---CLAFNSGNTKVF--SGGNDEQVILHDVESSETL 136
Query: 145 LLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVV 204
+ H+ + L++ P + ++F + +DG V +D+R E F NY +
Sbjct: 137 DVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL------ANYPSA- 189
Query: 205 NLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGI 264
+++ +P L A A S E L+DIRK + +
Sbjct: 190 -FHSVMFNPVEPRLLATANSKEGVGLWDIRKPQ----------------------SSLLR 226
Query: 265 TGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPST 324
G S QS + V +N L L PP + +R + +
Sbjct: 227 YGGNLSLQSAMSVRFNSNGTQLLALRRRL---PPVLYDIHSRLPVFQFDN---------- 273
Query: 325 ANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWK----KKGGELIRV 380
+G+ N T+K F G + +Y++SGSD +++WK + G + RV
Sbjct: 274 ------------QGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRV 321
Query: 381 I-------EADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
+ + R +VN + +PH+ ++ SSG+E IKI +P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 169/402 (42%), Gaps = 86/402 (21%)
Query: 32 LSTRNFALRR-RASEDLVLRLGIYAK-LDKHRGCVNTVSF-NTDGDILISGSDDRRVILW 88
L T++F RR R +L Y K L H GCVN + F N G L+SG DDRRV+LW
Sbjct: 28 LLTQDFQRRRLRGCRNL------YKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLW 81
Query: 89 DWKT---ERVK-LSFHSGHNDNVFQAKIMPF-TDDRSIVTCAADGQVRHAQILERGGVET 143
+ RVK + H+ N+F + F + + + + D QV + + ET
Sbjct: 82 HMEQAIHSRVKPIQLKGEHHSNIF---CLAFNSGNTKVFSGGNDEQV---ILHDVESSET 135
Query: 144 KLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTV 203
+ H+ + L++ P + ++F + +DG V +D+R E F NY +
Sbjct: 136 LDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL------ANYPSA 189
Query: 204 VNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVG 263
+++ +P L A A S E L+DIRK + +
Sbjct: 190 --FHSVMFNPVEPRLLATANSKEGVGLWDIRKPQ----------------------SSLL 225
Query: 264 ITGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPS 323
G S QS + V +N L L PP + +R + +
Sbjct: 226 RYGGNLSLQSAMSVRFNSNGTQLLALRRRL---PPVLYDIHSRLPVFQFDN--------- 273
Query: 324 TANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWK----KKGGELIR 379
+G+ N T+K F G + +Y++SGSD +++W+ + G + R
Sbjct: 274 -------------QGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGR 320
Query: 380 VI-------EADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
V+ + R +VN + +PH+ ++ SSG+E IKI +P
Sbjct: 321 VVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 389 VICSVSEDNIMQVWQM 404
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN ++FN + IL +GS D+ V LWD + R+KL H D +FQ + P
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R + + G+ + A+ E G E + G H + + P P
Sbjct: 321 NETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 380
Query: 165 VFYTCGEDGLVQHFDLRTGAATELFTCRPID 195
V + ED ++Q + + E+ P D
Sbjct: 381 VVCSVSEDNILQVWQMADNIYNEVDEETPAD 411
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H V V+F+ DG +L SGSDD V LWD + F GH V + F+
Sbjct: 497 LEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFE-GHTHYVLD---IAFS 552
Query: 117 DDRSIVTCAA-DGQVRHAQILERGGVETKLLGKHQGRAHKLAIEP-GSPHVFYTCGEDGL 174
D S+V + DG R + G E +L H + +A P GS + + DG
Sbjct: 553 PDGSMVASGSRDGTARLWNVAT--GTEHAVLKGHTDYVYAVAFSPDGS--MVASGSRDGT 608
Query: 175 VQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
++ +D+ TG ++ P + N+ ++A P + L V GSD L+D+
Sbjct: 609 IRLWDVATGKERDVLQA-PAE---------NVVSLAFSPDGSML--VHGSDSTVHLWDVA 656
Query: 235 K----YKWDGSTDFGQPADYFCP 253
+ ++G TD+ + A F P
Sbjct: 657 SGEALHTFEGHTDWVR-AVAFSP 678
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
+ H V V+F+ DG +L SGSDDR + LWD + + GH + V P
Sbjct: 664 FEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLE-GHTEPVHSVAFHP-- 720
Query: 117 DDRSIVTCAADGQVR 131
+ ++ + + DG +R
Sbjct: 721 EGTTLASASEDGTIR 735
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 25 WLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDK------HRGCVNTVSFNTDGDILIS 78
W+R + + + AL S+D +RL A ++ H V ++F+ DG ++ S
Sbjct: 503 WVRAVA--FSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVAS 560
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GS D LW+ T + + GH D V+ P D + + + DG +R +
Sbjct: 561 GSRDGTARLWNVATG-TEHAVLKGHTDYVYAVAFSP--DGSMVASGSRDGTIRLWDVAT- 616
Query: 139 GGVETKLLGKHQGRAHKLAIEP-GSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDR 197
G E +L LA P GS G D V +D+ +G A F +
Sbjct: 617 -GKERDVLQAPAENVVSLAFSPDGS---MLVHGSDSTVHLWDVASGEALHTF-----EGH 667
Query: 198 RNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDI 233
++ + A+A P A L A D RL+D+
Sbjct: 668 TDW-----VRAVAFSPDGA-LLASGSDDRTIRLWDV 697
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 334 QVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEP 393
++GH + V F P + SGSD I +W E +E V+ +
Sbjct: 662 HTFEGHTDWVRAVA---FSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAF 718
Query: 394 HPHSTVLASSGIESDIKI 411
HP T LAS+ + I+I
Sbjct: 719 HPEGTTLASASEDGTIRI 736
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 53 IYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKI 112
+ L H+ V +VSF+ DG+IL S S DR V LW W++ + L+ GH +V A+
Sbjct: 634 LLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKT-LAVLGGHTKSVDDAQF 692
Query: 113 MPFTDDRSIVTCAADGQVR 131
P D +++V+ DGQ+R
Sbjct: 693 SP--DGQTLVSVCRDGQIR 709
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 163/405 (40%), Gaps = 41/405 (10%)
Query: 67 VSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAA 126
V+++ +G++L +DD V LW + E +K + SGH++ V + P D + + + ++
Sbjct: 731 VNWHPNGNLLAVAADDGTVRLWTPQGE-IKATL-SGHDEFVTRVVFTP--DGKQLFSSSS 786
Query: 127 DGQVRHAQILERGGVETKLLGKHQGRAHKL-AIEPGSPHVFYTCG-EDGLVQHFDLRTGA 184
+G V H K+L K+QG + + S G E+ LV+ +D+
Sbjct: 787 NGSVIH------WSTSGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVKVWDMS--- 837
Query: 185 ATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDF 244
P D N L A+A + + N A+A +E L++ + +D
Sbjct: 838 --------PKSDLVNLNLPAVLGAVAENAKT-NTIALAMENEPLILFNTKNRSRQFLSDA 888
Query: 245 GQPADYFCPPN----LIGDEQVGITGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPPS 300
Q D L+G +S+LL ++ + ++ D+ P P
Sbjct: 889 SQNLDRLKFSADGQWLLGQRGRQWQLWQLQTKSQLLKTWRTDISRVYDVDLRTTPTSPQW 948
Query: 301 S-PVSTRSEASEM--GSDHTSAASPSTANTDVRIAPQVYKGHRNCVT----VKGVNFFGP 353
+ ++T S ++ G+ + + + + + + N + ++ V+ P
Sbjct: 949 AIAMATGSGEVQLWQGTKNNQTSGNQSQGVPIELNDPIVLALGNSIQRKEPIRSVSLH-P 1007
Query: 354 KCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKILT 413
+ +G + G + +W G LIR I A +N ++ P+ L S+G E KI +
Sbjct: 1008 TLPQLAAGDEQGNLTLWNFDG-TLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWS 1066
Query: 414 PNAADRATL---PTNIEQVLIPDHIRWFALGDDDDGDYYFYDIYG 455
TL P I+Q+ I +W A DG +D G
Sbjct: 1067 VEGQLLHTLKSDPLPIDQIAISPDSQWIATA-ASDGMVRLWDQQG 1110
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 64/172 (37%), Gaps = 19/172 (11%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H G + V F+ +G I + D+ V +WD + L GH D+V+ P D
Sbjct: 600 HTGSIYRVDFSPNGKIFATAGQDQTVKIWD--LDGNLLQTLKGHQDSVYSVSFSP--DGE 655
Query: 120 SIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFD 179
+ + + D VR R G +LG H P + C DG ++ +D
Sbjct: 656 ILASTSRDRTVRLWHW--RSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVC-RDGQIRLWD 712
Query: 180 LRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLY 231
L R+ + V + P N NL AVA D RL+
Sbjct: 713 LDGNLI-----------RQFGLPEVAFFGVNWHP-NGNLLAVAADDGTVRLW 752
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQHFDL 180
V + ED ++Q + +
Sbjct: 388 VICSVSEDNIMQIWQM 403
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H G V +V F+ DG + SGSDD + +WD + + GH D+V+ P
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE-GHGDSVWSVAFSP-- 1103
Query: 117 DDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQ 176
D + + + + DG ++ G T+ L H G H +A P V + DG ++
Sbjct: 1104 DGQRVASGSIDGTIKIWD--AASGTCTQTLEGHGGWVHSVAFSPDGQRV-ASGSIDGTIK 1160
Query: 177 HFDLRTGAATELF 189
+D +G T+
Sbjct: 1161 IWDAASGTCTQTL 1173
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 140/365 (38%), Gaps = 50/365 (13%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H V +V+F+ DG + SGSDD+ + +WD GH +V+ + F+
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWD-TASGTGTQTLEGHGGSVWS---VAFS 892
Query: 117 DDRSIVTCAADGQVRHAQILERG-GVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLV 175
DR V +D + +I + G T+ L H GR +A P V + +D +
Sbjct: 893 PDRERVASGSDDKT--IKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV-ASGSDDHTI 949
Query: 176 QHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRK 235
+ +D +G T+ ++ ++A P + A D+ +++D
Sbjct: 950 KIWDAASGTCTQTLEGHG----------SSVLSVAFSP-DGQRVASGSGDKTIKIWDT-- 996
Query: 236 YKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVS-YNDEFIYLF------- 287
A C L G + +AFS + + S +D+ I ++
Sbjct: 997 ------------ASGTCTQTLEGHGG-SVWSVAFSPDGQRVASGSDDKTIKIWDTASGTC 1043
Query: 288 TQDMGLGPNPPPSSPVSTRSEASEMGS-DHTSAASPSTANTDVRIAPQVYKGHRNCVTVK 346
TQ + S S + GS DHT + + T Q +GH + V
Sbjct: 1044 TQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT----CTQTLEGHGDSVWSV 1099
Query: 347 GVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIE 406
F P + V SGS G I IW G + +E V+ + P +AS I+
Sbjct: 1100 A---FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSID 1156
Query: 407 SDIKI 411
IKI
Sbjct: 1157 GTIKI 1161
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWD 89
L+ H G V +V+F+ DG + SGS D+ + +WD
Sbjct: 1173 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWD 1205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,608,287
Number of Sequences: 539616
Number of extensions: 12276558
Number of successful extensions: 187388
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 1188
Number of HSP's that attempted gapping in prelim test: 97978
Number of HSP's gapped (non-prelim): 40910
length of query: 538
length of database: 191,569,459
effective HSP length: 122
effective length of query: 416
effective length of database: 125,736,307
effective search space: 52306303712
effective search space used: 52306303712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)