Query 009272
Match_columns 538
No_of_seqs 203 out of 2065
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ju2_A HydroxynitrIle lyase; f 100.0 4.1E-77 1.4E-81 635.0 36.1 497 30-537 10-520 (536)
2 3fim_B ARYL-alcohol oxidase; A 100.0 3.2E-76 1.1E-80 627.2 36.6 460 46-533 2-565 (566)
3 3qvp_A Glucose oxidase; oxidor 100.0 9.9E-75 3.4E-79 616.4 39.5 471 44-533 17-578 (583)
4 3q9t_A Choline dehydrogenase a 100.0 3.2E-72 1.1E-76 597.8 33.6 458 44-533 4-572 (577)
5 3t37_A Probable dehydrogenase; 100.0 2.4E-70 8E-75 585.8 37.4 461 44-533 15-523 (526)
6 1gpe_A Protein (glucose oxidas 100.0 3.6E-70 1.2E-74 586.8 33.5 472 44-535 22-584 (587)
7 2jbv_A Choline oxidase; alcoho 100.0 1.4E-68 4.7E-73 570.7 37.8 460 45-533 12-529 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 3.3E-59 1.1E-63 500.6 29.3 449 44-533 5-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 4.9E-58 1.7E-62 485.6 28.5 439 45-537 4-503 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.2E-57 4.3E-62 482.6 26.6 430 41-536 6-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 7E-47 2.4E-51 408.0 25.2 445 43-534 43-613 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 3.1E-14 1E-18 150.6 15.1 62 217-288 208-271 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.4 5.8E-13 2E-17 142.6 14.7 190 44-288 119-318 (566)
14 1y0p_A Fumarate reductase flav 99.4 9.9E-13 3.4E-17 141.0 15.9 186 45-285 125-320 (571)
15 4dgk_A Phytoene dehydrogenase; 99.4 1.2E-12 4E-17 138.3 11.6 70 206-289 216-285 (501)
16 1d4d_A Flavocytochrome C fumar 99.3 1.2E-11 4E-16 132.5 15.3 62 217-287 261-323 (572)
17 2bs2_A Quinol-fumarate reducta 99.3 2.2E-11 7.4E-16 131.7 14.0 57 217-283 164-221 (660)
18 2h88_A Succinate dehydrogenase 99.3 3.7E-11 1.3E-15 129.0 14.9 57 217-283 161-218 (621)
19 3dme_A Conserved exported prot 99.2 8.1E-12 2.8E-16 126.0 8.4 64 217-293 156-220 (369)
20 3da1_A Glycerol-3-phosphate de 99.2 2.6E-11 8.8E-16 129.4 11.6 66 217-293 176-242 (561)
21 2wdq_A Succinate dehydrogenase 99.2 5.3E-11 1.8E-15 127.5 13.7 58 217-283 149-207 (588)
22 1chu_A Protein (L-aspartate ox 99.2 6.3E-11 2.2E-15 125.7 12.3 35 45-79 7-41 (540)
23 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.6E-10 5.4E-15 120.0 14.3 55 217-285 140-194 (447)
24 3nyc_A D-arginine dehydrogenas 99.2 1.1E-11 3.8E-16 125.8 5.1 36 44-79 7-42 (381)
25 1kf6_A Fumarate reductase flav 99.2 3.8E-10 1.3E-14 121.1 16.1 58 217-284 140-199 (602)
26 1y56_B Sarcosine oxidase; dehy 99.2 4.8E-11 1.7E-15 121.2 8.5 36 43-78 2-38 (382)
27 2rgh_A Alpha-glycerophosphate 99.1 3.7E-10 1.3E-14 120.7 15.1 65 217-292 194-259 (571)
28 3v76_A Flavoprotein; structura 99.1 6.6E-11 2.3E-15 121.3 7.9 37 43-79 24-61 (417)
29 3dje_A Fructosyl amine: oxygen 99.1 2.8E-10 9.6E-15 117.9 11.2 38 43-80 3-42 (438)
30 3gyx_A Adenylylsulfate reducta 99.1 1.7E-10 6E-15 124.5 8.3 60 217-283 172-234 (662)
31 2oln_A NIKD protein; flavoprot 99.1 3.4E-10 1.2E-14 115.6 9.7 36 44-79 2-38 (397)
32 2gag_B Heterotetrameric sarcos 99.0 5E-10 1.7E-14 114.5 10.0 36 44-79 19-57 (405)
33 1jnr_A Adenylylsulfate reducta 99.0 1.3E-09 4.4E-14 118.1 13.2 59 218-283 158-219 (643)
34 1ryi_A Glycine oxidase; flavop 99.0 1.7E-10 6E-15 117.0 5.6 37 43-79 14-51 (382)
35 1pj5_A N,N-dimethylglycine oxi 99.0 5.2E-10 1.8E-14 125.2 9.6 60 217-292 157-216 (830)
36 2gqf_A Hypothetical protein HI 99.0 8.9E-10 3.1E-14 112.4 10.2 35 45-79 3-38 (401)
37 2e5v_A L-aspartate oxidase; ar 99.0 1E-09 3.4E-14 114.6 10.7 52 217-282 125-176 (472)
38 2qcu_A Aerobic glycerol-3-phos 99.0 3.6E-09 1.2E-13 111.4 15.1 60 217-288 155-215 (501)
39 3ps9_A TRNA 5-methylaminomethy 99.0 2.4E-09 8.1E-14 117.1 13.8 35 45-79 271-306 (676)
40 3pvc_A TRNA 5-methylaminomethy 99.0 2.3E-09 7.8E-14 117.4 13.1 35 45-79 263-298 (689)
41 3nlc_A Uncharacterized protein 98.9 1.8E-09 6.3E-14 113.8 8.5 36 44-79 105-141 (549)
42 2gf3_A MSOX, monomeric sarcosi 98.9 2.7E-09 9.4E-14 108.4 9.6 34 46-79 3-37 (389)
43 2uzz_A N-methyl-L-tryptophan o 98.9 7.5E-10 2.6E-14 111.9 5.1 34 46-79 2-36 (372)
44 3oz2_A Digeranylgeranylglycero 98.9 4.7E-09 1.6E-13 106.6 9.7 35 45-79 3-38 (397)
45 3axb_A Putative oxidoreductase 98.9 1.8E-09 6.2E-14 112.1 6.7 33 45-77 22-56 (448)
46 3cgv_A Geranylgeranyl reductas 98.9 9E-09 3.1E-13 104.8 11.4 34 46-79 4-38 (397)
47 1rp0_A ARA6, thiazole biosynth 98.9 1.5E-08 5.3E-13 98.3 12.5 35 45-79 38-74 (284)
48 3ka7_A Oxidoreductase; structu 98.8 5.2E-09 1.8E-13 107.7 9.3 57 217-288 202-258 (425)
49 3atr_A Conserved archaeal prot 98.8 1.6E-08 5.4E-13 105.1 11.5 57 217-283 106-163 (453)
50 3e1t_A Halogenase; flavoprotei 98.8 1E-08 3.4E-13 108.3 8.8 57 217-283 117-173 (512)
51 3jsk_A Cypbp37 protein; octame 98.7 5.5E-08 1.9E-12 95.7 12.3 35 45-79 78-115 (344)
52 3nrn_A Uncharacterized protein 98.7 1.8E-08 6E-13 103.7 9.0 36 47-82 1-37 (421)
53 3p1w_A Rabgdi protein; GDI RAB 98.7 2E-08 6.9E-13 103.7 8.1 41 43-83 17-58 (475)
54 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 6.1E-08 2.1E-12 96.7 9.4 33 47-79 2-38 (342)
55 2zxi_A TRNA uridine 5-carboxym 98.6 7.3E-08 2.5E-12 102.2 9.5 34 45-78 26-60 (637)
56 3nix_A Flavoprotein/dehydrogen 98.6 9.7E-08 3.3E-12 98.0 10.2 35 45-79 4-39 (421)
57 1yvv_A Amine oxidase, flavin-c 98.6 4.1E-08 1.4E-12 97.5 6.6 34 46-79 2-36 (336)
58 4fk1_A Putative thioredoxin re 98.6 3E-07 1E-11 90.0 12.2 36 43-78 3-39 (304)
59 2gjc_A Thiazole biosynthetic e 98.6 2E-07 7E-12 91.1 10.8 35 45-79 64-101 (326)
60 3ces_A MNMG, tRNA uridine 5-ca 98.6 8.8E-08 3E-12 101.9 8.7 34 45-78 27-61 (651)
61 3i3l_A Alkylhalidase CMLS; fla 98.6 7.9E-08 2.7E-12 102.7 8.0 36 44-79 21-57 (591)
62 2cul_A Glucose-inhibited divis 98.6 2.5E-07 8.6E-12 86.8 10.7 34 45-78 2-36 (232)
63 3c4n_A Uncharacterized protein 98.5 8.7E-08 3E-12 98.0 7.3 35 45-79 35-72 (405)
64 4a9w_A Monooxygenase; baeyer-v 98.5 1.9E-07 6.4E-12 93.3 8.6 34 46-79 3-37 (357)
65 3cp8_A TRNA uridine 5-carboxym 98.5 1.7E-07 6E-12 99.6 8.3 35 44-78 19-54 (641)
66 2gmh_A Electron transfer flavo 98.5 2.3E-07 7.8E-12 99.3 9.0 58 217-283 150-218 (584)
67 3ihg_A RDME; flavoenzyme, anth 98.5 4.3E-07 1.5E-11 96.3 10.8 36 45-80 4-40 (535)
68 3cty_A Thioredoxin reductase; 98.5 5.6E-07 1.9E-11 88.6 10.8 64 219-292 198-262 (319)
69 2qa1_A PGAE, polyketide oxygen 98.4 8E-07 2.7E-11 93.3 11.4 39 41-79 6-45 (500)
70 3rp8_A Flavoprotein monooxygen 98.4 7E-07 2.4E-11 91.2 10.7 37 43-79 20-57 (407)
71 2bry_A NEDD9 interacting prote 98.4 1.9E-07 6.5E-12 98.0 6.2 36 44-79 90-126 (497)
72 3f8d_A Thioredoxin reductase ( 98.4 8.2E-07 2.8E-11 87.2 10.2 33 45-77 14-47 (323)
73 2qa2_A CABE, polyketide oxygen 98.4 1.2E-06 4E-11 92.0 11.7 39 41-79 7-46 (499)
74 1mo9_A ORF3; nucleotide bindin 98.4 2.8E-06 9.4E-11 89.8 14.1 66 217-292 261-327 (523)
75 4ap3_A Steroid monooxygenase; 98.4 5.9E-07 2E-11 95.3 8.4 36 44-79 19-55 (549)
76 3fmw_A Oxygenase; mithramycin, 98.4 3.5E-07 1.2E-11 97.4 6.7 36 45-80 48-84 (570)
77 3urh_A Dihydrolipoyl dehydroge 98.3 8E-07 2.7E-11 93.2 8.6 36 44-79 23-59 (491)
78 2gv8_A Monooxygenase; FMO, FAD 98.3 1.3E-06 4.5E-11 90.4 10.0 37 44-80 4-43 (447)
79 3lad_A Dihydrolipoamide dehydr 98.3 5.5E-07 1.9E-11 94.0 7.2 35 45-79 2-37 (476)
80 3gwf_A Cyclohexanone monooxyge 98.3 7.2E-07 2.5E-11 94.4 7.7 35 45-79 7-43 (540)
81 3ab1_A Ferredoxin--NADP reduct 98.3 1.6E-06 5.5E-11 86.9 9.8 37 43-79 11-48 (360)
82 3kkj_A Amine oxidase, flavin-c 98.3 2.2E-07 7.7E-12 88.6 3.3 34 46-79 2-36 (336)
83 3d1c_A Flavin-containing putat 98.3 1.1E-06 3.7E-11 88.4 8.4 33 46-78 4-38 (369)
84 2x3n_A Probable FAD-dependent 98.3 1.8E-06 6.2E-11 87.9 10.2 35 45-79 5-40 (399)
85 1w4x_A Phenylacetone monooxyge 98.3 1.4E-06 4.7E-11 92.5 9.5 36 44-79 14-50 (542)
86 4gcm_A TRXR, thioredoxin reduc 98.3 3.2E-07 1.1E-11 90.0 4.3 34 45-78 5-39 (312)
87 2zbw_A Thioredoxin reductase; 98.3 1.4E-06 4.7E-11 86.3 8.8 36 44-79 3-39 (335)
88 3uox_A Otemo; baeyer-villiger 98.3 1.5E-06 5.3E-11 91.9 9.5 36 44-79 7-43 (545)
89 3lxd_A FAD-dependent pyridine 98.3 1.5E-06 5.2E-11 88.9 9.1 62 218-293 201-262 (415)
90 3itj_A Thioredoxin reductase 1 98.3 8.8E-07 3E-11 87.7 6.8 56 222-287 220-276 (338)
91 1k0i_A P-hydroxybenzoate hydro 98.3 2.1E-06 7E-11 87.2 9.6 34 46-79 2-36 (394)
92 2vou_A 2,6-dihydroxypyridine h 98.3 4.9E-06 1.7E-10 84.6 12.1 35 45-79 4-39 (397)
93 3r9u_A Thioredoxin reductase; 98.2 9.4E-06 3.2E-10 79.3 13.4 59 220-288 192-250 (315)
94 4a5l_A Thioredoxin reductase; 98.2 3.3E-07 1.1E-11 89.9 2.7 36 43-78 1-37 (314)
95 3lzw_A Ferredoxin--NADP reduct 98.2 4.6E-06 1.6E-10 82.2 10.1 34 46-79 7-41 (332)
96 2xve_A Flavin-containing monoo 98.2 7.3E-06 2.5E-10 85.1 11.8 33 47-79 3-42 (464)
97 3s5w_A L-ornithine 5-monooxyge 98.2 6.4E-06 2.2E-10 85.6 11.3 35 45-79 29-69 (463)
98 2bcg_G Secretory pathway GDP d 98.1 1.1E-06 3.8E-11 91.1 4.1 41 43-83 8-49 (453)
99 4gut_A Lysine-specific histone 98.1 1.1E-05 3.8E-10 88.6 12.1 38 44-81 334-372 (776)
100 2r0c_A REBC; flavin adenine di 98.1 1.3E-05 4.4E-10 85.1 12.2 35 45-79 25-60 (549)
101 3fg2_P Putative rubredoxin red 98.1 7.5E-06 2.6E-10 83.5 10.0 62 218-293 191-252 (404)
102 2q0l_A TRXR, thioredoxin reduc 98.1 1.2E-05 4E-10 78.6 10.8 31 47-77 2-34 (311)
103 4b1b_A TRXR, thioredoxin reduc 98.1 1.1E-06 3.7E-11 92.8 3.1 34 46-79 42-76 (542)
104 3fpz_A Thiazole biosynthetic e 98.1 1.3E-06 4.4E-11 86.4 3.3 36 44-79 63-101 (326)
105 4gde_A UDP-galactopyranose mut 98.0 1.5E-06 5.2E-11 91.4 2.6 38 45-82 9-48 (513)
106 2dkh_A 3-hydroxybenzoate hydro 98.0 1.7E-05 5.9E-10 85.7 9.5 36 44-79 30-67 (639)
107 1c0p_A D-amino acid oxidase; a 98.0 3.6E-06 1.2E-10 84.4 3.8 37 43-79 3-40 (363)
108 3k7m_X 6-hydroxy-L-nicotine ox 97.9 2.5E-06 8.7E-11 87.6 2.6 34 47-80 2-36 (431)
109 3qfa_A Thioredoxin reductase 1 97.9 3.7E-06 1.3E-10 88.7 3.3 38 41-78 27-65 (519)
110 3o0h_A Glutathione reductase; 97.9 3.6E-06 1.2E-10 88.0 3.0 34 45-78 25-59 (484)
111 4dna_A Probable glutathione re 97.9 4E-06 1.4E-10 87.1 3.4 33 45-77 4-37 (463)
112 3l8k_A Dihydrolipoyl dehydroge 97.9 3E-06 1E-10 88.1 2.1 36 44-79 2-38 (466)
113 3ic9_A Dihydrolipoamide dehydr 97.9 3.5E-06 1.2E-10 88.2 2.6 33 46-78 8-41 (492)
114 1v0j_A UDP-galactopyranose mut 97.8 7.7E-06 2.6E-10 83.2 4.1 40 43-82 4-45 (399)
115 1hyu_A AHPF, alkyl hydroperoxi 97.8 3.7E-05 1.2E-09 81.1 9.0 34 43-76 209-243 (521)
116 2r9z_A Glutathione amide reduc 97.8 6.3E-06 2.2E-10 85.6 3.0 35 44-78 2-37 (463)
117 1ges_A Glutathione reductase; 97.8 6.3E-06 2.2E-10 85.3 3.0 35 44-78 2-37 (450)
118 1zk7_A HGII, reductase, mercur 97.8 7.6E-06 2.6E-10 85.1 3.6 36 43-78 1-37 (467)
119 3dk9_A Grase, GR, glutathione 97.8 4.9E-06 1.7E-10 86.8 2.1 35 44-78 18-53 (478)
120 1i8t_A UDP-galactopyranose mut 97.8 9.2E-06 3.1E-10 81.6 3.9 36 46-81 1-37 (367)
121 3hdq_A UDP-galactopyranose mut 97.8 9.6E-06 3.3E-10 81.9 3.9 39 43-81 26-65 (397)
122 3dgz_A Thioredoxin reductase 2 97.8 7E-06 2.4E-10 85.9 2.6 36 44-79 4-40 (488)
123 3g3e_A D-amino-acid oxidase; F 97.8 8.6E-06 3E-10 81.2 2.9 32 48-79 2-40 (351)
124 1s3e_A Amine oxidase [flavin-c 97.8 9.4E-06 3.2E-10 85.6 3.2 39 44-82 2-41 (520)
125 2xdo_A TETX2 protein; tetracyc 97.8 1.3E-05 4.3E-10 81.5 4.0 37 43-79 23-60 (398)
126 2hqm_A GR, grase, glutathione 97.8 8.1E-06 2.8E-10 85.2 2.5 34 45-78 10-44 (479)
127 3dgh_A TRXR-1, thioredoxin red 97.7 1.1E-05 3.8E-10 84.3 3.2 35 44-78 7-42 (483)
128 3cgb_A Pyridine nucleotide-dis 97.7 9.5E-05 3.2E-09 77.1 10.3 34 46-79 36-72 (480)
129 2ivd_A PPO, PPOX, protoporphyr 97.7 1.3E-05 4.4E-10 83.6 3.4 41 42-82 12-53 (478)
130 1d5t_A Guanine nucleotide diss 97.7 1.4E-05 4.9E-10 82.1 3.7 42 43-84 3-45 (433)
131 3c96_A Flavin-containing monoo 97.7 1.1E-05 3.8E-10 82.3 2.9 36 44-79 2-39 (410)
132 2jae_A L-amino acid oxidase; o 97.7 1.5E-05 5.1E-10 83.4 3.8 39 44-82 9-48 (489)
133 2b9w_A Putative aminooxidase; 97.7 1.5E-05 5.1E-10 81.7 3.8 39 44-82 4-44 (424)
134 4b63_A L-ornithine N5 monooxyg 97.7 1.6E-05 5.6E-10 83.3 3.7 62 214-280 147-212 (501)
135 1v59_A Dihydrolipoamide dehydr 97.7 9.3E-06 3.2E-10 84.7 1.5 36 44-79 3-39 (478)
136 3i6d_A Protoporphyrinogen oxid 97.7 1.1E-05 3.8E-10 83.7 1.9 36 46-81 5-47 (470)
137 2e1m_A L-glutamate oxidase; L- 97.7 2E-05 6.9E-10 78.9 3.6 37 43-79 41-79 (376)
138 2qae_A Lipoamide, dihydrolipoy 97.7 1.6E-05 5.4E-10 82.7 3.0 34 46-79 2-36 (468)
139 1ojt_A Surface protein; redox- 97.7 1.2E-05 4.1E-10 83.9 2.0 37 43-79 3-40 (482)
140 1rsg_A FMS1 protein; FAD bindi 97.7 1.2E-05 4.3E-10 84.6 2.1 38 45-82 7-46 (516)
141 1onf_A GR, grase, glutathione 97.6 1.8E-05 6E-10 83.1 3.2 33 46-78 2-35 (500)
142 3ef6_A Toluene 1,2-dioxygenase 97.6 0.00014 4.7E-09 74.2 9.8 60 219-293 193-252 (410)
143 1sez_A Protoporphyrinogen oxid 97.6 2.2E-05 7.6E-10 82.3 3.8 40 43-82 10-50 (504)
144 2vvm_A Monoamine oxidase N; FA 97.6 1.9E-05 6.6E-10 82.7 3.0 38 45-82 38-76 (495)
145 2yqu_A 2-oxoglutarate dehydrog 97.6 2E-05 6.7E-10 81.7 2.8 34 46-79 1-35 (455)
146 3nks_A Protoporphyrinogen oxid 97.6 2.3E-05 7.9E-10 81.6 3.3 35 47-81 3-40 (477)
147 3alj_A 2-methyl-3-hydroxypyrid 97.6 2.6E-05 8.7E-10 78.7 3.3 36 45-80 10-46 (379)
148 1lvl_A Dihydrolipoamide dehydr 97.6 2.4E-05 8.2E-10 81.1 2.7 34 45-78 4-38 (458)
149 1zmd_A Dihydrolipoyl dehydroge 97.6 2.3E-05 7.8E-10 81.6 2.4 35 45-79 5-40 (474)
150 2yg5_A Putrescine oxidase; oxi 97.5 2.6E-05 8.8E-10 80.6 2.6 38 45-82 4-42 (453)
151 2q7v_A Thioredoxin reductase; 97.5 2.7E-05 9.1E-10 76.7 2.3 34 44-77 6-40 (325)
152 2wpf_A Trypanothione reductase 97.5 2.8E-05 9.6E-10 81.4 2.5 35 43-77 4-40 (495)
153 1fec_A Trypanothione reductase 97.5 3.3E-05 1.1E-09 80.8 3.0 32 45-76 2-35 (490)
154 2bi7_A UDP-galactopyranose mut 97.5 5.3E-05 1.8E-09 76.5 4.4 36 46-81 3-39 (384)
155 3lov_A Protoporphyrinogen oxid 97.5 3.9E-05 1.3E-09 79.9 3.4 36 46-81 4-42 (475)
156 1dxl_A Dihydrolipoamide dehydr 97.5 4.2E-05 1.4E-09 79.5 3.6 36 44-79 4-40 (470)
157 1ebd_A E3BD, dihydrolipoamide 97.5 3.3E-05 1.1E-09 80.0 2.6 32 46-77 3-35 (455)
158 2eq6_A Pyruvate dehydrogenase 97.5 3.2E-05 1.1E-09 80.2 2.5 33 46-78 6-39 (464)
159 3klj_A NAD(FAD)-dependent dehy 97.5 0.00021 7.3E-09 72.1 8.5 35 45-79 8-43 (385)
160 2ywl_A Thioredoxin reductase r 97.5 4E-05 1.4E-09 68.4 2.6 32 47-78 2-34 (180)
161 3fbs_A Oxidoreductase; structu 97.5 4.1E-05 1.4E-09 74.0 2.7 34 46-79 2-36 (297)
162 3ihm_A Styrene monooxygenase A 97.5 3.4E-05 1.2E-09 79.2 2.3 33 46-78 22-55 (430)
163 4dsg_A UDP-galactopyranose mut 97.4 6.4E-05 2.2E-09 78.4 3.9 38 44-81 7-46 (484)
164 2a8x_A Dihydrolipoyl dehydroge 97.4 4.7E-05 1.6E-09 79.0 2.5 32 46-77 3-35 (464)
165 2iid_A L-amino-acid oxidase; f 97.4 6.6E-05 2.3E-09 78.6 3.6 38 44-81 31-69 (498)
166 3g5s_A Methylenetetrahydrofola 97.4 9.5E-05 3.3E-09 73.3 3.9 34 47-80 2-36 (443)
167 1trb_A Thioredoxin reductase; 97.3 4.6E-05 1.6E-09 74.7 1.4 33 45-77 4-37 (320)
168 1fl2_A Alkyl hydroperoxide red 97.3 8.9E-05 3.1E-09 72.2 2.9 31 46-76 1-32 (310)
169 2a87_A TRXR, TR, thioredoxin r 97.3 7E-05 2.4E-09 74.0 1.9 35 43-77 11-46 (335)
170 1b37_A Protein (polyamine oxid 97.3 0.0001 3.5E-09 76.6 3.0 38 45-82 3-42 (472)
171 1xdi_A RV3303C-LPDA; reductase 97.2 0.00011 3.6E-09 77.1 2.5 33 46-78 2-38 (499)
172 2vdc_G Glutamate synthase [NAD 97.2 0.00015 5.3E-09 74.8 3.5 36 44-79 120-156 (456)
173 2aqj_A Tryptophan halogenase, 97.2 0.00014 4.6E-09 77.1 3.1 35 45-79 4-42 (538)
174 3k30_A Histamine dehydrogenase 97.2 0.00018 6E-09 78.6 3.9 39 43-81 388-427 (690)
175 4hb9_A Similarities with proba 97.2 0.00016 5.4E-09 73.3 3.2 32 48-79 3-35 (412)
176 1vg0_A RAB proteins geranylger 97.2 0.00018 6E-09 76.6 3.5 43 43-85 5-48 (650)
177 1vdc_A NTR, NADPH dependent th 97.1 0.00011 3.9E-09 72.3 1.7 32 45-76 7-39 (333)
178 2v3a_A Rubredoxin reductase; a 97.1 0.00021 7.2E-09 72.1 3.4 61 217-292 193-253 (384)
179 2x8g_A Thioredoxin glutathione 97.1 0.00018 6.2E-09 77.2 2.6 34 44-77 105-139 (598)
180 1q1r_A Putidaredoxin reductase 97.1 0.00024 8.4E-09 72.8 3.3 61 219-293 199-261 (431)
181 2z3y_A Lysine-specific histone 97.0 0.00041 1.4E-08 75.2 4.9 38 44-81 105-143 (662)
182 2e4g_A Tryptophan halogenase; 97.0 0.00031 1.1E-08 74.4 3.9 35 45-79 24-62 (550)
183 3c4a_A Probable tryptophan hyd 97.0 0.00025 8.7E-09 71.4 3.0 34 47-80 1-37 (381)
184 2weu_A Tryptophan 5-halogenase 97.0 0.00019 6.6E-09 75.4 1.7 34 46-79 2-39 (511)
185 2pyx_A Tryptophan halogenase; 96.9 0.00032 1.1E-08 74.0 2.9 35 45-79 6-53 (526)
186 1xhc_A NADH oxidase /nitrite r 96.9 0.00041 1.4E-08 69.5 3.4 34 46-80 8-42 (367)
187 2v3a_A Rubredoxin reductase; a 96.9 0.004 1.4E-07 62.6 10.8 34 46-79 145-179 (384)
188 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.00058 2E-08 74.2 4.4 38 44-81 371-409 (671)
189 2xag_A Lysine-specific histone 96.9 0.00068 2.3E-08 75.0 4.8 38 44-81 276-314 (852)
190 2bc0_A NADH oxidase; flavoprot 96.8 0.00038 1.3E-08 72.6 2.3 34 46-79 35-72 (490)
191 1pn0_A Phenol 2-monooxygenase; 96.8 0.0004 1.4E-08 75.3 2.3 34 46-79 8-47 (665)
192 1m6i_A Programmed cell death p 96.8 0.00056 1.9E-08 71.4 3.3 61 218-293 233-293 (493)
193 1o94_A Tmadh, trimethylamine d 96.8 0.00059 2E-08 74.8 3.6 37 44-80 387-424 (729)
194 2cdu_A NADPH oxidase; flavoenz 96.8 0.00054 1.9E-08 70.7 3.0 33 47-79 1-36 (452)
195 2gqw_A Ferredoxin reductase; f 96.8 0.00059 2E-08 69.4 3.2 36 45-80 6-44 (408)
196 3kd9_A Coenzyme A disulfide re 96.7 0.00073 2.5E-08 69.6 3.6 35 46-80 3-40 (449)
197 3ab1_A Ferredoxin--NADP reduct 96.7 0.0061 2.1E-07 60.5 10.0 59 224-292 215-273 (360)
198 3oc4_A Oxidoreductase, pyridin 96.7 0.00077 2.6E-08 69.5 3.2 35 47-81 3-40 (452)
199 3iwa_A FAD-dependent pyridine 96.6 0.00078 2.7E-08 69.9 3.2 61 217-292 208-268 (472)
200 2gag_A Heterotetrameric sarcos 96.6 0.00071 2.4E-08 76.5 2.8 61 221-291 326-392 (965)
201 1trb_A Thioredoxin reductase; 96.6 0.008 2.7E-07 58.4 9.7 55 223-287 196-252 (320)
202 2eq6_A Pyruvate dehydrogenase 96.5 0.0095 3.3E-07 61.5 10.6 33 47-79 170-203 (464)
203 1cjc_A Protein (adrenodoxin re 96.5 0.0011 3.7E-08 68.6 3.2 36 45-80 5-43 (460)
204 1gte_A Dihydropyrimidine dehyd 96.5 0.001 3.4E-08 75.8 3.3 36 45-80 186-223 (1025)
205 1nhp_A NADH peroxidase; oxidor 96.5 0.00099 3.4E-08 68.6 3.0 34 47-80 1-37 (447)
206 2yqu_A 2-oxoglutarate dehydrog 96.5 0.013 4.3E-07 60.4 10.8 33 47-79 168-201 (455)
207 3ics_A Coenzyme A-disulfide re 96.4 0.0014 4.9E-08 69.9 3.4 60 217-293 234-293 (588)
208 1lqt_A FPRA; NADP+ derivative, 96.4 0.0013 4.5E-08 67.8 2.9 35 46-80 3-45 (456)
209 1q1r_A Putidaredoxin reductase 96.4 0.015 5.2E-07 59.3 11.0 33 47-79 150-183 (431)
210 1fl2_A Alkyl hydroperoxide red 96.4 0.012 4E-07 56.9 9.6 54 224-287 193-247 (310)
211 3h28_A Sulfide-quinone reducta 96.4 0.0014 4.7E-08 67.1 3.0 34 47-80 3-39 (430)
212 1y56_A Hypothetical protein PH 96.3 0.0012 4.2E-08 68.8 2.4 35 46-80 108-142 (493)
213 3sx6_A Sulfide-quinone reducta 96.3 0.002 6.9E-08 66.0 3.8 35 46-80 4-42 (437)
214 3f8d_A Thioredoxin reductase ( 96.2 0.039 1.3E-06 53.3 12.4 59 223-292 202-261 (323)
215 3h8l_A NADH oxidase; membrane 96.2 0.0017 5.9E-08 65.9 2.5 33 48-80 3-39 (409)
216 2q0l_A TRXR, thioredoxin reduc 96.1 0.023 8E-07 54.8 10.4 57 224-290 192-249 (311)
217 3ic9_A Dihydrolipoamide dehydr 96.1 0.015 5.3E-07 60.4 9.4 33 47-79 175-208 (492)
218 4g6h_A Rotenone-insensitive NA 96.0 0.0036 1.2E-07 65.3 4.1 37 44-80 40-77 (502)
219 1v59_A Dihydrolipoamide dehydr 96.0 0.011 3.7E-07 61.3 7.7 33 47-79 184-217 (478)
220 4eqs_A Coenzyme A disulfide re 96.0 0.0033 1.1E-07 64.5 3.6 32 49-80 3-37 (437)
221 2qae_A Lipoamide, dihydrolipoy 96.0 0.033 1.1E-06 57.4 11.3 33 47-79 175-208 (468)
222 2zbw_A Thioredoxin reductase; 96.0 0.042 1.4E-06 53.6 11.3 59 223-292 203-262 (335)
223 3ntd_A FAD-dependent pyridine 95.9 0.0029 9.8E-08 67.2 2.8 34 47-80 2-38 (565)
224 3vrd_B FCCB subunit, flavocyto 95.9 0.0027 9.3E-08 64.2 2.6 59 220-294 211-269 (401)
225 3urh_A Dihydrolipoyl dehydroge 95.9 0.044 1.5E-06 56.9 11.8 59 223-292 251-312 (491)
226 1ges_A Glutathione reductase; 95.9 0.026 8.9E-07 57.9 9.7 33 47-79 168-201 (450)
227 3ayj_A Pro-enzyme of L-phenyla 95.9 0.0022 7.5E-08 69.2 1.6 35 46-80 56-100 (721)
228 3s5w_A L-ornithine 5-monooxyge 95.9 0.045 1.6E-06 56.2 11.5 34 46-79 227-263 (463)
229 2hqm_A GR, grase, glutathione 95.8 0.018 6.3E-07 59.6 8.5 33 47-79 186-219 (479)
230 1ebd_A E3BD, dihydrolipoamide 95.8 0.034 1.2E-06 57.1 10.2 34 46-79 170-204 (455)
231 2r9z_A Glutathione amide reduc 95.6 0.061 2.1E-06 55.4 11.4 32 48-79 168-200 (463)
232 3cgb_A Pyridine nucleotide-dis 95.6 0.018 6.1E-07 59.7 7.4 34 46-79 186-220 (480)
233 2q7v_A Thioredoxin reductase; 95.6 0.063 2.1E-06 52.1 11.0 53 224-287 201-254 (325)
234 2a8x_A Dihydrolipoyl dehydroge 95.6 0.04 1.4E-06 56.7 10.0 33 47-79 172-205 (464)
235 1ojt_A Surface protein; redox- 95.6 0.031 1.1E-06 57.9 9.1 33 47-79 186-219 (482)
236 1hyu_A AHPF, alkyl hydroperoxi 95.6 0.038 1.3E-06 57.9 9.7 54 224-287 404-458 (521)
237 1zmd_A Dihydrolipoyl dehydroge 95.6 0.063 2.1E-06 55.4 11.3 33 47-79 179-212 (474)
238 1xdi_A RV3303C-LPDA; reductase 95.6 0.036 1.2E-06 57.7 9.3 55 223-292 235-291 (499)
239 3ntd_A FAD-dependent pyridine 95.5 0.09 3.1E-06 55.5 12.5 32 48-79 153-185 (565)
240 2cdu_A NADPH oxidase; flavoenz 95.5 0.067 2.3E-06 54.8 11.0 33 47-79 150-183 (452)
241 1dxl_A Dihydrolipoamide dehydr 95.4 0.032 1.1E-06 57.5 8.3 33 47-79 178-211 (470)
242 2gqw_A Ferredoxin reductase; f 95.4 0.067 2.3E-06 54.0 10.5 34 46-79 145-179 (408)
243 3iwa_A FAD-dependent pyridine 95.3 0.1 3.5E-06 53.8 11.7 33 47-79 160-194 (472)
244 3hyw_A Sulfide-quinone reducta 95.2 0.0075 2.6E-07 61.6 2.8 57 220-292 209-265 (430)
245 1onf_A GR, grase, glutathione 95.2 0.11 3.7E-06 54.0 11.5 33 47-79 177-210 (500)
246 3o0h_A Glutathione reductase; 95.1 0.088 3E-06 54.5 10.4 33 47-79 192-225 (484)
247 3dk9_A Grase, GR, glutathione 95.0 0.051 1.7E-06 56.2 8.5 33 47-79 188-221 (478)
248 3dgh_A TRXR-1, thioredoxin red 95.0 0.096 3.3E-06 54.2 10.6 55 223-287 239-294 (483)
249 3lad_A Dihydrolipoamide dehydr 95.0 0.14 4.6E-06 52.9 11.7 33 47-79 181-214 (476)
250 3ics_A Coenzyme A-disulfide re 95.0 0.083 2.8E-06 56.1 10.1 33 47-79 188-221 (588)
251 3dgz_A Thioredoxin reductase 2 94.8 0.15 5.2E-06 52.7 11.3 60 223-292 237-299 (488)
252 3oc4_A Oxidoreductase, pyridin 94.7 0.066 2.3E-06 54.9 8.1 33 47-79 148-181 (452)
253 1m6i_A Programmed cell death p 94.6 0.13 4.4E-06 53.4 10.2 32 47-78 181-217 (493)
254 4dna_A Probable glutathione re 94.4 0.099 3.4E-06 53.7 8.6 33 47-79 171-204 (463)
255 3lzw_A Ferredoxin--NADP reduct 94.3 0.09 3.1E-06 50.9 7.8 58 224-292 202-260 (332)
256 2wpf_A Trypanothione reductase 93.7 0.26 8.9E-06 51.0 10.3 57 222-292 246-304 (495)
257 1fec_A Trypanothione reductase 93.7 0.23 8E-06 51.4 9.9 57 222-292 242-300 (490)
258 4b1b_A TRXR, thioredoxin reduc 93.5 0.38 1.3E-05 50.4 11.1 32 47-78 224-256 (542)
259 4g6h_A Rotenone-insensitive NA 92.9 0.39 1.3E-05 49.8 10.0 32 48-79 219-265 (502)
260 1nhp_A NADH peroxidase; oxidor 92.2 0.074 2.5E-06 54.4 3.5 35 45-79 148-183 (447)
261 4gcm_A TRXR, thioredoxin reduc 92.1 0.086 2.9E-06 50.8 3.6 33 48-80 147-180 (312)
262 1gte_A Dihydropyrimidine dehyd 91.8 0.4 1.4E-05 54.5 9.2 31 48-78 334-366 (1025)
263 3klj_A NAD(FAD)-dependent dehy 91.2 0.097 3.3E-06 52.4 3.0 33 48-80 148-181 (385)
264 2g1u_A Hypothetical protein TM 91.0 0.11 3.8E-06 44.4 2.8 33 47-79 20-53 (155)
265 3llv_A Exopolyphosphatase-rela 90.8 0.11 3.8E-06 43.5 2.5 31 48-78 8-39 (141)
266 3fwz_A Inner membrane protein 90.5 0.18 6E-06 42.3 3.5 32 47-78 8-40 (140)
267 1lss_A TRK system potassium up 90.4 0.13 4.6E-06 42.6 2.7 32 47-78 5-37 (140)
268 1lvl_A Dihydrolipoamide dehydr 90.4 0.13 4.3E-06 52.9 2.9 34 47-80 172-206 (458)
269 4a5l_A Thioredoxin reductase; 90.3 0.16 5.4E-06 48.8 3.5 33 47-79 153-186 (314)
270 1xhc_A NADH oxidase /nitrite r 89.6 0.15 5.1E-06 50.7 2.6 34 47-80 144-178 (367)
271 1id1_A Putative potassium chan 88.7 0.25 8.5E-06 42.0 3.1 31 48-78 5-36 (153)
272 3ic5_A Putative saccharopine d 87.5 0.24 8.3E-06 39.6 2.2 31 48-78 7-39 (118)
273 2bc0_A NADH oxidase; flavoprot 86.8 0.32 1.1E-05 50.3 3.1 34 47-80 195-229 (490)
274 2hmt_A YUAA protein; RCK, KTN, 86.8 0.25 8.6E-06 41.1 2.0 31 48-78 8-39 (144)
275 2gv8_A Monooxygenase; FMO, FAD 86.7 0.37 1.3E-05 49.1 3.5 33 47-79 213-247 (447)
276 4eqs_A Coenzyme A disulfide re 86.3 0.56 1.9E-05 47.6 4.6 35 47-81 148-183 (437)
277 3d1c_A Flavin-containing putat 86.1 0.32 1.1E-05 47.8 2.6 32 48-79 168-200 (369)
278 2xve_A Flavin-containing monoo 86.0 0.43 1.5E-05 49.0 3.5 33 47-79 198-231 (464)
279 1f0y_A HCDH, L-3-hydroxyacyl-C 85.7 0.43 1.5E-05 45.8 3.2 31 48-78 17-48 (302)
280 3ado_A Lambda-crystallin; L-gu 85.7 0.34 1.1E-05 46.9 2.4 31 48-78 8-39 (319)
281 3gwf_A Cyclohexanone monooxyge 85.4 0.51 1.8E-05 49.4 3.8 33 47-79 179-212 (540)
282 3kd9_A Coenzyme A disulfide re 85.1 0.44 1.5E-05 48.5 3.1 34 47-80 149-183 (449)
283 3hn2_A 2-dehydropantoate 2-red 85.1 0.5 1.7E-05 45.6 3.3 31 48-78 4-35 (312)
284 3uox_A Otemo; baeyer-villiger 85.1 0.5 1.7E-05 49.5 3.6 34 47-80 186-220 (545)
285 1vdc_A NTR, NADPH dependent th 85.0 0.56 1.9E-05 45.3 3.7 57 223-287 207-264 (333)
286 3ef6_A Toluene 1,2-dioxygenase 84.9 0.45 1.5E-05 47.9 3.0 35 46-80 143-178 (410)
287 2a87_A TRXR, TR, thioredoxin r 84.5 0.6 2E-05 45.3 3.7 33 47-79 156-189 (335)
288 3l4b_C TRKA K+ channel protien 84.4 0.36 1.2E-05 43.8 1.9 30 49-78 3-33 (218)
289 2bcg_G Secretory pathway GDP d 84.4 0.87 3E-05 46.4 5.0 62 205-281 236-299 (453)
290 3i83_A 2-dehydropantoate 2-red 84.3 0.48 1.6E-05 45.9 2.8 31 48-78 4-35 (320)
291 3oj0_A Glutr, glutamyl-tRNA re 83.9 0.72 2.5E-05 38.6 3.5 31 48-78 23-54 (144)
292 1zk7_A HGII, reductase, mercur 83.5 0.56 1.9E-05 48.1 3.0 34 47-80 177-211 (467)
293 4ap3_A Steroid monooxygenase; 82.8 0.59 2E-05 49.0 3.0 34 47-80 192-226 (549)
294 4g65_A TRK system potassium up 82.6 0.62 2.1E-05 47.6 3.0 31 48-78 5-36 (461)
295 3cty_A Thioredoxin reductase; 82.6 0.7 2.4E-05 44.4 3.2 33 47-79 156-189 (319)
296 3itj_A Thioredoxin reductase 1 82.2 0.85 2.9E-05 44.0 3.7 34 47-80 174-208 (338)
297 3dfz_A SIRC, precorrin-2 dehyd 82.1 0.77 2.6E-05 41.8 3.1 30 47-76 32-62 (223)
298 3lxd_A FAD-dependent pyridine 81.8 0.73 2.5E-05 46.3 3.1 34 47-80 153-187 (415)
299 3fg2_P Putative rubredoxin red 81.5 0.74 2.5E-05 46.1 3.0 34 47-80 143-177 (404)
300 1kyq_A Met8P, siroheme biosynt 81.4 0.62 2.1E-05 43.9 2.2 32 47-78 14-46 (274)
301 3l8k_A Dihydrolipoyl dehydroge 81.3 0.73 2.5E-05 47.2 3.0 34 47-80 173-207 (466)
302 3g17_A Similar to 2-dehydropan 81.2 0.57 2E-05 44.7 2.0 31 48-78 4-35 (294)
303 3fbs_A Oxidoreductase; structu 81.0 1.2 4.1E-05 42.0 4.2 33 46-79 141-174 (297)
304 1ks9_A KPA reductase;, 2-dehyd 80.8 0.8 2.7E-05 43.3 2.8 31 49-79 3-34 (291)
305 2x8g_A Thioredoxin glutathione 80.7 0.72 2.5E-05 48.9 2.7 30 48-77 288-318 (598)
306 2raf_A Putative dinucleotide-b 80.7 0.89 3E-05 40.9 3.0 33 47-79 20-53 (209)
307 4e12_A Diketoreductase; oxidor 80.4 0.94 3.2E-05 42.9 3.2 31 48-78 6-37 (283)
308 1jw9_B Molybdopterin biosynthe 80.2 0.82 2.8E-05 42.5 2.6 34 46-79 31-66 (249)
309 1vg0_A RAB proteins geranylger 79.8 2.5 8.4E-05 45.0 6.4 65 203-280 370-435 (650)
310 3ghy_A Ketopantoate reductase 79.8 0.78 2.7E-05 44.7 2.4 30 48-77 5-35 (335)
311 3c85_A Putative glutathione-re 79.4 0.9 3.1E-05 39.7 2.5 32 47-78 40-73 (183)
312 2ewd_A Lactate dehydrogenase,; 79.1 1.2 4.1E-05 43.0 3.5 32 47-78 5-38 (317)
313 1d5t_A Guanine nucleotide diss 79.0 1 3.5E-05 45.6 3.1 62 205-281 228-289 (433)
314 1mo9_A ORF3; nucleotide bindin 78.2 1.1 3.7E-05 46.7 3.0 34 47-80 215-249 (523)
315 1lld_A L-lactate dehydrogenase 78.1 1.1 3.6E-05 43.3 2.8 32 47-78 8-42 (319)
316 2ew2_A 2-dehydropantoate 2-red 77.7 1.1 3.6E-05 43.0 2.6 31 48-78 5-36 (316)
317 3rui_A Ubiquitin-like modifier 77.3 1.6 5.4E-05 42.4 3.7 35 46-80 34-70 (340)
318 2dpo_A L-gulonate 3-dehydrogen 76.8 1.1 3.8E-05 43.3 2.4 31 48-78 8-39 (319)
319 1zcj_A Peroxisomal bifunctiona 76.6 1.3 4.5E-05 45.3 3.1 31 48-78 39-70 (463)
320 3hwr_A 2-dehydropantoate 2-red 76.5 1.2 4E-05 43.1 2.5 29 48-77 21-50 (318)
321 3qha_A Putative oxidoreductase 76.3 2.1 7.3E-05 40.7 4.3 34 46-79 15-49 (296)
322 3l9w_A Glutathione-regulated p 76.1 1.2 4E-05 44.8 2.5 32 47-78 5-37 (413)
323 3qfa_A Thioredoxin reductase 1 76.1 1.2 4.1E-05 46.3 2.6 30 48-77 212-242 (519)
324 1bg6_A N-(1-D-carboxylethyl)-L 75.9 1.3 4.4E-05 43.3 2.8 32 47-78 5-37 (359)
325 3r9u_A Thioredoxin reductase; 75.5 1.6 5.5E-05 41.5 3.2 34 47-80 148-182 (315)
326 2y0c_A BCEC, UDP-glucose dehyd 75.5 1.3 4.4E-05 45.5 2.6 32 47-78 9-41 (478)
327 1txg_A Glycerol-3-phosphate de 75.3 1.3 4.6E-05 42.8 2.6 28 49-76 3-31 (335)
328 1jay_A Coenzyme F420H2:NADP+ o 74.8 1.7 6E-05 38.8 3.1 30 49-78 3-34 (212)
329 4dio_A NAD(P) transhydrogenase 74.7 1.5 5.2E-05 43.6 2.8 34 46-79 190-224 (405)
330 4a9w_A Monooxygenase; baeyer-v 74.5 1.8 6E-05 41.9 3.3 31 47-78 164-195 (357)
331 1mv8_A GMD, GDP-mannose 6-dehy 74.4 1.8 6E-05 43.9 3.3 30 49-78 3-33 (436)
332 2aef_A Calcium-gated potassium 74.1 1.3 4.3E-05 40.5 2.0 31 47-78 10-41 (234)
333 3k6j_A Protein F01G10.3, confi 74.1 2.1 7.2E-05 43.5 3.8 32 48-79 56-88 (460)
334 1zud_1 Adenylyltransferase THI 73.6 2 6.9E-05 39.8 3.3 34 46-79 28-63 (251)
335 3k96_A Glycerol-3-phosphate de 73.5 1.7 5.8E-05 42.7 2.9 32 47-78 30-62 (356)
336 2a9f_A Putative malic enzyme ( 73.5 1.6 5.6E-05 43.0 2.7 34 46-79 188-223 (398)
337 3p2y_A Alanine dehydrogenase/p 73.3 1.6 5.5E-05 43.1 2.6 34 46-79 184-218 (381)
338 3ego_A Probable 2-dehydropanto 72.8 2 6.8E-05 41.2 3.1 31 48-78 4-34 (307)
339 1z82_A Glycerol-3-phosphate de 72.8 1.8 6E-05 42.1 2.8 33 46-78 14-47 (335)
340 1pzg_A LDH, lactate dehydrogen 72.7 1.7 5.8E-05 42.2 2.6 32 47-78 10-43 (331)
341 1vl6_A Malate oxidoreductase; 72.5 1.8 6.1E-05 42.6 2.7 34 46-79 192-227 (388)
342 3lk7_A UDP-N-acetylmuramoylala 72.4 2.3 8E-05 43.2 3.7 31 48-78 11-42 (451)
343 1nyt_A Shikimate 5-dehydrogena 72.3 1.8 6.1E-05 40.7 2.6 31 48-78 121-152 (271)
344 3h8v_A Ubiquitin-like modifier 72.3 1.7 5.9E-05 41.2 2.5 34 46-79 36-71 (292)
345 1cjc_A Protein (adrenodoxin re 72.3 2 7E-05 43.8 3.2 54 223-284 269-335 (460)
346 3gg2_A Sugar dehydrogenase, UD 71.8 1.8 6.1E-05 44.1 2.6 31 48-78 4-35 (450)
347 3pdu_A 3-hydroxyisobutyrate de 71.7 2.3 7.7E-05 40.3 3.2 32 48-79 3-35 (287)
348 1evy_A Glycerol-3-phosphate de 71.5 1.7 5.7E-05 42.8 2.3 31 48-78 17-48 (366)
349 2vns_A Metalloreductase steap3 71.5 1.9 6.6E-05 38.8 2.5 31 48-78 30-61 (215)
350 3dtt_A NADP oxidoreductase; st 71.4 2 6.9E-05 39.6 2.7 33 46-78 19-52 (245)
351 2v6b_A L-LDH, L-lactate dehydr 71.3 1.9 6.6E-05 41.3 2.6 30 49-78 3-35 (304)
352 2vdc_G Glutamate synthase [NAD 70.7 1.9 6.5E-05 43.9 2.6 33 47-79 265-299 (456)
353 1x13_A NAD(P) transhydrogenase 70.4 2 7E-05 42.9 2.7 32 47-78 173-205 (401)
354 2eez_A Alanine dehydrogenase; 70.4 2.1 7.1E-05 42.3 2.7 32 47-78 167-199 (369)
355 3cky_A 2-hydroxymethyl glutara 70.2 2.8 9.6E-05 39.8 3.5 32 47-78 5-37 (301)
356 3ond_A Adenosylhomocysteinase; 70.2 2.1 7E-05 43.7 2.6 32 47-78 266-298 (488)
357 1o94_A Tmadh, trimethylamine d 70.1 2.1 7.1E-05 46.6 2.9 32 47-78 529-563 (729)
358 3mog_A Probable 3-hydroxybutyr 70.0 1.9 6.6E-05 44.2 2.4 31 48-78 7-38 (483)
359 2hjr_A Malate dehydrogenase; m 69.9 2.1 7.3E-05 41.4 2.6 31 48-78 16-48 (328)
360 2pv7_A T-protein [includes: ch 69.8 2.5 8.5E-05 40.3 3.0 31 48-78 23-55 (298)
361 3vh1_A Ubiquitin-like modifier 69.8 3.3 0.00011 43.3 4.1 35 46-80 327-363 (598)
362 2h78_A Hibadh, 3-hydroxyisobut 69.7 2.8 9.4E-05 39.9 3.3 31 48-78 5-36 (302)
363 4dll_A 2-hydroxy-3-oxopropiona 69.6 3.2 0.00011 39.9 3.8 32 47-78 32-64 (320)
364 1pjc_A Protein (L-alanine dehy 69.1 2.3 7.9E-05 41.8 2.7 32 47-78 168-200 (361)
365 3pef_A 6-phosphogluconate dehy 69.0 2.3 8E-05 40.1 2.7 32 48-79 3-35 (287)
366 3phh_A Shikimate dehydrogenase 68.6 2.6 9.1E-05 39.4 2.8 34 46-79 118-152 (269)
367 2ywl_A Thioredoxin reductase r 68.4 4.4 0.00015 34.9 4.1 55 219-292 64-118 (180)
368 2vvm_A Monoamine oxidase N; FA 68.4 6.2 0.00021 40.3 6.0 63 207-284 251-314 (495)
369 1a5z_A L-lactate dehydrogenase 68.4 2.4 8.2E-05 40.9 2.6 30 49-78 3-35 (319)
370 3doj_A AT3G25530, dehydrogenas 68.3 2.5 8.4E-05 40.6 2.7 32 47-78 22-54 (310)
371 1t2d_A LDH-P, L-lactate dehydr 68.3 2.8 9.6E-05 40.5 3.1 32 47-78 5-38 (322)
372 1l7d_A Nicotinamide nucleotide 68.2 2.6 8.8E-05 41.9 2.9 34 46-79 172-206 (384)
373 2vhw_A Alanine dehydrogenase; 68.1 2.5 8.5E-05 41.9 2.7 32 47-78 169-201 (377)
374 2gag_A Heterotetrameric sarcos 67.9 2.5 8.5E-05 47.6 3.0 33 48-80 286-319 (965)
375 3g0o_A 3-hydroxyisobutyrate de 67.8 2.5 8.6E-05 40.3 2.6 32 47-78 8-40 (303)
376 1nvt_A Shikimate 5'-dehydrogen 67.6 3.1 0.00011 39.4 3.1 30 48-78 130-160 (287)
377 1p77_A Shikimate 5-dehydrogena 67.5 2.2 7.5E-05 40.1 2.1 31 48-78 121-152 (272)
378 4gsl_A Ubiquitin-like modifier 67.2 2.6 9E-05 44.1 2.7 35 46-80 326-362 (615)
379 3ius_A Uncharacterized conserv 67.2 3.4 0.00012 38.7 3.4 30 49-78 8-38 (286)
380 2egg_A AROE, shikimate 5-dehyd 67.1 3.1 0.00011 39.6 3.1 32 47-78 142-175 (297)
381 3h5n_A MCCB protein; ubiquitin 67.1 2.8 9.4E-05 41.1 2.8 34 46-79 118-153 (353)
382 1yqg_A Pyrroline-5-carboxylate 66.8 2.8 9.5E-05 38.9 2.6 30 49-78 3-34 (263)
383 1hyh_A L-hicdh, L-2-hydroxyiso 66.7 2.7 9.2E-05 40.3 2.6 31 48-78 3-36 (309)
384 2gf2_A Hibadh, 3-hydroxyisobut 66.7 3.5 0.00012 39.0 3.4 30 49-78 3-33 (296)
385 1vpd_A Tartronate semialdehyde 66.5 3.5 0.00012 39.1 3.3 31 48-78 7-38 (299)
386 1yj8_A Glycerol-3-phosphate de 66.4 2.3 7.8E-05 42.0 2.1 32 48-79 23-62 (375)
387 4ezb_A Uncharacterized conserv 66.4 3.2 0.00011 39.9 3.0 31 48-78 26-58 (317)
388 2f1k_A Prephenate dehydrogenas 66.2 2.9 9.8E-05 39.2 2.6 30 49-78 3-33 (279)
389 4a7p_A UDP-glucose dehydrogena 66.0 3.3 0.00011 42.0 3.1 34 46-79 8-42 (446)
390 3ojo_A CAP5O; rossmann fold, c 65.9 3.1 0.0001 41.9 2.9 32 47-78 12-44 (431)
391 3gpi_A NAD-dependent epimerase 65.9 3 0.0001 39.1 2.7 31 49-79 6-37 (286)
392 3d4o_A Dipicolinate synthase s 65.9 3 0.0001 39.6 2.7 32 47-78 156-188 (293)
393 2wtb_A MFP2, fatty acid multif 65.8 2.9 0.0001 45.3 2.9 31 48-78 314-345 (725)
394 3dfu_A Uncharacterized protein 65.8 2.2 7.4E-05 39.0 1.6 29 48-76 8-37 (232)
395 1leh_A Leucine dehydrogenase; 65.6 2.9 0.0001 41.0 2.6 31 47-77 174-205 (364)
396 1x0v_A GPD-C, GPDH-C, glycerol 65.5 2.1 7.3E-05 41.8 1.6 32 48-79 10-49 (354)
397 2x5o_A UDP-N-acetylmuramoylala 65.4 2.7 9.1E-05 42.6 2.4 32 48-79 7-39 (439)
398 1w4x_A Phenylacetone monooxyge 65.3 3.1 0.00011 43.3 3.0 34 47-80 187-221 (542)
399 2rir_A Dipicolinate synthase, 64.9 3.2 0.00011 39.5 2.7 32 47-78 158-190 (300)
400 3tl2_A Malate dehydrogenase; c 64.5 3.2 0.00011 39.9 2.6 31 47-77 9-41 (315)
401 1dlj_A UDP-glucose dehydrogena 64.5 3.8 0.00013 40.9 3.2 30 49-78 3-32 (402)
402 3nks_A Protoporphyrinogen oxid 64.1 1.8 6.3E-05 44.0 0.9 65 207-286 230-294 (477)
403 3ew7_A LMO0794 protein; Q8Y8U8 64.1 3.8 0.00013 36.5 2.9 30 49-78 3-34 (221)
404 4e21_A 6-phosphogluconate dehy 64.0 3.5 0.00012 40.5 2.8 34 45-78 21-55 (358)
405 2hk9_A Shikimate dehydrogenase 63.9 3.4 0.00012 38.8 2.6 31 48-78 131-162 (275)
406 2uyy_A N-PAC protein; long-cha 63.8 4.1 0.00014 39.0 3.3 32 47-78 31-63 (316)
407 3zwc_A Peroxisomal bifunctiona 63.7 3.6 0.00012 44.5 3.1 32 47-78 317-349 (742)
408 3dqp_A Oxidoreductase YLBE; al 63.6 4.5 0.00015 36.1 3.3 31 49-79 3-35 (219)
409 3fbt_A Chorismate mutase and s 63.6 4.5 0.00015 38.2 3.4 32 47-78 123-156 (282)
410 3qsg_A NAD-binding phosphogluc 63.6 3.4 0.00012 39.7 2.6 31 47-77 25-57 (312)
411 3vtf_A UDP-glucose 6-dehydroge 63.6 3.3 0.00011 41.8 2.5 32 47-78 22-54 (444)
412 1y8q_A Ubiquitin-like 1 activa 63.5 3.3 0.00011 40.4 2.5 34 46-79 36-71 (346)
413 3pid_A UDP-glucose 6-dehydroge 63.5 3.8 0.00013 41.2 3.0 32 47-78 37-68 (432)
414 3c7a_A Octopine dehydrogenase; 63.4 3.5 0.00012 41.1 2.8 28 48-75 4-33 (404)
415 2g5c_A Prephenate dehydrogenas 63.4 3.4 0.00012 38.8 2.6 30 49-78 4-36 (281)
416 4gx0_A TRKA domain protein; me 63.1 3.7 0.00013 43.0 3.0 34 47-80 349-383 (565)
417 1tt5_B Ubiquitin-activating en 62.8 3.8 0.00013 41.3 2.9 34 46-79 40-75 (434)
418 1lu9_A Methylene tetrahydromet 62.8 3.6 0.00012 38.8 2.6 32 47-78 120-153 (287)
419 3tnl_A Shikimate dehydrogenase 62.7 3.8 0.00013 39.4 2.7 31 47-77 155-187 (315)
420 4huj_A Uncharacterized protein 62.7 1.9 6.4E-05 39.0 0.6 31 48-78 25-57 (220)
421 1guz_A Malate dehydrogenase; o 62.7 3.9 0.00013 39.2 2.8 30 49-78 3-35 (310)
422 3ggo_A Prephenate dehydrogenas 62.7 3.6 0.00012 39.6 2.6 32 47-78 34-68 (314)
423 2zyd_A 6-phosphogluconate dehy 62.4 4.2 0.00014 41.6 3.2 33 46-78 15-48 (480)
424 3c24_A Putative oxidoreductase 62.0 3.6 0.00012 38.7 2.5 31 48-78 13-45 (286)
425 3don_A Shikimate dehydrogenase 62.0 3.5 0.00012 38.8 2.3 33 47-79 118-152 (277)
426 1hdo_A Biliverdin IX beta redu 62.0 4.1 0.00014 35.7 2.7 32 48-79 5-38 (206)
427 3jyo_A Quinate/shikimate dehyd 61.9 3.9 0.00013 38.6 2.6 32 47-78 128-161 (283)
428 1lnq_A MTHK channels, potassiu 61.9 2.4 8.1E-05 41.1 1.2 32 47-79 116-148 (336)
429 1zej_A HBD-9, 3-hydroxyacyl-CO 61.6 4.5 0.00015 38.4 3.0 32 47-78 13-44 (293)
430 3h2s_A Putative NADH-flavin re 61.5 4.1 0.00014 36.4 2.7 30 49-78 3-34 (224)
431 3e8x_A Putative NAD-dependent 61.5 4.1 0.00014 36.9 2.7 31 48-78 23-55 (236)
432 1ur5_A Malate dehydrogenase; o 61.1 4 0.00014 39.1 2.6 31 48-78 4-36 (309)
433 3o38_A Short chain dehydrogena 60.9 4.1 0.00014 37.8 2.6 31 48-78 24-57 (266)
434 3l6d_A Putative oxidoreductase 60.9 5.1 0.00018 38.2 3.3 32 47-78 10-42 (306)
435 2yjz_A Metalloreductase steap4 65.1 1.8 6E-05 38.7 0.0 31 48-78 21-52 (201)
436 3u62_A Shikimate dehydrogenase 60.9 4.1 0.00014 37.8 2.5 31 48-78 110-142 (253)
437 1pjq_A CYSG, siroheme synthase 60.6 3.8 0.00013 41.7 2.5 30 48-77 14-44 (457)
438 1ff9_A Saccharopine reductase; 60.5 6 0.0002 40.1 3.9 31 48-78 5-36 (450)
439 4g65_A TRK system potassium up 60.3 5 0.00017 40.9 3.3 33 47-79 236-268 (461)
440 3o8q_A Shikimate 5-dehydrogena 60.2 5.3 0.00018 37.7 3.2 32 47-78 127-160 (281)
441 3g79_A NDP-N-acetyl-D-galactos 59.8 5.6 0.00019 40.6 3.6 32 48-79 20-54 (478)
442 3k30_A Histamine dehydrogenase 59.6 4.5 0.00015 43.6 3.0 33 48-80 525-560 (690)
443 3ce6_A Adenosylhomocysteinase; 59.5 4.3 0.00015 41.6 2.6 32 47-78 275-307 (494)
444 2rcy_A Pyrroline carboxylate r 59.4 4 0.00014 37.8 2.2 31 48-78 6-41 (262)
445 1pgj_A 6PGDH, 6-PGDH, 6-phosph 59.3 4.2 0.00014 41.7 2.5 31 48-78 3-34 (478)
446 2pgd_A 6-phosphogluconate dehy 59.2 4.5 0.00015 41.5 2.7 31 48-78 4-35 (482)
447 3gvp_A Adenosylhomocysteinase 59.1 4.6 0.00016 40.4 2.6 32 47-78 221-253 (435)
448 1c1d_A L-phenylalanine dehydro 59.1 4.5 0.00015 39.5 2.5 31 47-77 176-207 (355)
449 2weu_A Tryptophan 5-halogenase 58.8 9.1 0.00031 39.3 5.0 51 217-281 179-229 (511)
450 1i36_A Conserved hypothetical 58.6 3.9 0.00013 37.9 2.0 28 49-76 3-31 (264)
451 1wdk_A Fatty oxidation complex 58.6 3.4 0.00012 44.7 1.8 31 48-78 316-347 (715)
452 4ffl_A PYLC; amino acid, biosy 58.5 5.3 0.00018 39.0 3.1 31 49-79 4-35 (363)
453 1y8q_B Anthracycline-, ubiquit 58.4 4.6 0.00016 42.7 2.6 34 46-79 17-52 (640)
454 2i6t_A Ubiquitin-conjugating e 58.3 4.8 0.00017 38.4 2.6 32 47-78 15-49 (303)
455 3pwz_A Shikimate dehydrogenase 58.1 5 0.00017 37.6 2.6 32 47-78 121-154 (272)
456 3ktd_A Prephenate dehydrogenas 57.8 4.7 0.00016 39.2 2.4 31 48-78 10-41 (341)
457 3t4e_A Quinate/shikimate dehyd 57.7 5.2 0.00018 38.3 2.7 31 47-77 149-181 (312)
458 3d1l_A Putative NADP oxidoredu 57.6 4.8 0.00016 37.4 2.4 31 48-78 12-44 (266)
459 2izz_A Pyrroline-5-carboxylate 57.6 4.7 0.00016 38.8 2.5 32 47-78 23-59 (322)
460 2pd4_A Enoyl-[acyl-carrier-pro 57.5 7.8 0.00027 36.1 3.9 30 49-78 9-42 (275)
461 1npy_A Hypothetical shikimate 57.3 6.2 0.00021 37.0 3.1 32 47-78 120-153 (271)
462 2p4q_A 6-phosphogluconate dehy 57.2 5.5 0.00019 41.0 3.0 33 46-78 10-43 (497)
463 1oju_A MDH, malate dehydrogena 57.1 5.2 0.00018 38.0 2.6 30 49-78 3-35 (294)
464 2dbq_A Glyoxylate reductase; D 57.0 5.6 0.00019 38.6 2.8 32 47-78 151-183 (334)
465 1edz_A 5,10-methylenetetrahydr 56.9 7.9 0.00027 37.1 3.8 32 46-77 177-210 (320)
466 2d5c_A AROE, shikimate 5-dehyd 56.9 5 0.00017 37.3 2.4 31 48-78 118-149 (263)
467 2dkn_A 3-alpha-hydroxysteroid 56.9 5.9 0.0002 36.1 2.9 30 49-78 4-35 (255)
468 2cvz_A Dehydrogenase, 3-hydrox 56.8 7.7 0.00026 36.3 3.8 30 49-78 4-33 (289)
469 3i6d_A Protoporphyrinogen oxid 56.8 13 0.00045 37.3 5.8 46 226-286 248-293 (470)
470 2ahr_A Putative pyrroline carb 56.6 6.7 0.00023 36.2 3.3 31 48-78 5-36 (259)
471 3r6d_A NAD-dependent epimerase 56.5 5.7 0.00019 35.5 2.7 30 49-78 8-40 (221)
472 3abi_A Putative uncharacterize 56.5 6.6 0.00023 38.5 3.3 33 46-78 16-48 (365)
473 3eag_A UDP-N-acetylmuramate:L- 56.4 6.9 0.00024 37.7 3.4 32 48-79 6-39 (326)
474 3qvo_A NMRA family protein; st 56.4 6.1 0.00021 35.8 2.9 32 48-79 25-59 (236)
475 1gpj_A Glutamyl-tRNA reductase 56.4 5.3 0.00018 39.9 2.6 32 47-78 168-201 (404)
476 1lqt_A FPRA; NADP+ derivative, 56.3 6.5 0.00022 39.9 3.4 50 224-284 265-328 (456)
477 3n58_A Adenosylhomocysteinase; 56.2 4.9 0.00017 40.4 2.3 32 47-78 248-280 (464)
478 3gvi_A Malate dehydrogenase; N 56.1 5.5 0.00019 38.4 2.6 32 47-78 8-41 (324)
479 1yb4_A Tartronic semialdehyde 55.8 5.4 0.00018 37.6 2.5 28 48-75 5-33 (295)
480 2e4g_A Tryptophan halogenase; 55.8 8.5 0.00029 40.1 4.2 51 217-281 200-251 (550)
481 3ldh_A Lactate dehydrogenase; 55.6 5.7 0.00019 38.4 2.6 31 47-77 22-55 (330)
482 1h6d_A Precursor form of gluco 55.4 5.6 0.00019 40.1 2.6 34 44-77 81-118 (433)
483 1tt5_A APPBP1, amyloid protein 54.8 6.3 0.00022 40.8 2.9 33 46-78 32-66 (531)
484 3k7m_X 6-hydroxy-L-nicotine ox 54.7 13 0.00046 36.9 5.4 45 220-280 213-257 (431)
485 2d0i_A Dehydrogenase; structur 54.7 7.7 0.00027 37.5 3.4 31 48-78 148-179 (333)
486 1np3_A Ketol-acid reductoisome 54.5 6 0.00021 38.4 2.6 31 48-78 18-49 (338)
487 2gcg_A Glyoxylate reductase/hy 54.4 7.7 0.00026 37.4 3.4 31 48-78 157-188 (330)
488 3pqe_A L-LDH, L-lactate dehydr 54.3 7.4 0.00025 37.5 3.2 31 47-77 6-39 (326)
489 4gx0_A TRKA domain protein; me 54.3 9.6 0.00033 39.8 4.4 33 46-78 127-160 (565)
490 4gwg_A 6-phosphogluconate dehy 53.9 6.3 0.00022 40.3 2.7 32 47-78 5-37 (484)
491 2h7i_A Enoyl-[acyl-carrier-pro 53.8 7.2 0.00025 36.2 3.0 30 49-78 10-43 (269)
492 3vps_A TUNA, NAD-dependent epi 53.8 6.3 0.00022 37.3 2.6 32 48-79 9-42 (321)
493 3ba1_A HPPR, hydroxyphenylpyru 53.2 7.7 0.00026 37.5 3.1 32 48-79 166-198 (333)
494 3vku_A L-LDH, L-lactate dehydr 53.0 6.7 0.00023 37.8 2.6 31 47-77 10-43 (326)
495 2iz1_A 6-phosphogluconate dehy 53.0 6.1 0.00021 40.3 2.5 32 47-78 6-38 (474)
496 3p7m_A Malate dehydrogenase; p 53.0 7.2 0.00025 37.5 2.9 31 48-78 7-39 (321)
497 2dvm_A Malic enzyme, 439AA lon 52.8 6 0.00021 39.8 2.3 29 47-75 187-219 (439)
498 3gt0_A Pyrroline-5-carboxylate 52.7 6.2 0.00021 36.2 2.3 31 48-78 4-39 (247)
499 2o3j_A UDP-glucose 6-dehydroge 52.7 8 0.00027 39.6 3.3 31 48-78 11-44 (481)
500 1pqw_A Polyketide synthase; ro 52.6 5.7 0.00019 34.9 1.9 31 48-78 41-73 (198)
No 1
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=4.1e-77 Score=635.04 Aligned_cols=497 Identities=43% Similarity=0.783 Sum_probs=381.8
Q ss_pred CCcccccccccCCCCCCccEEEECCCCchHHHhhhhcCCCeEEEEeccCCCCCCCCcccchhhhhhhcCCC-CCCCCccc
Q 009272 30 PNYSFMRNATAAKPVSYYDYIVIGGGTAGCPLAASLSQNASVLLLERGDSPYGNPNITNSGSFSAELADLS-PTSPSQRF 108 (538)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 108 (538)
..++|+.++....+..+|||||||||++|+++|.+|++|.+|||||+|+.....+....+..|...+.++. |.+.+|.+
T Consensus 10 ~~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~ 89 (536)
T 1ju2_A 10 SYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERF 89 (536)
T ss_dssp GGGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEE
T ss_pred ccCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCccc
Confidence 34567777766656678999999999999999999999889999999987533344444545554443222 45666766
Q ss_pred cCCCceeecCcccccchhhhcccccccCChhhhhcCC--CChhhhhhhhhhhccccccCCCCchhHHHHHHHHHHcCCCC
Q 009272 109 ISEDGVVSTRARVLGGGTCINAGFYTRAEPYYAREAG--WDGRLVNESYQWVEKKVVFRPPMQRWQSALRDGLVEVGVLP 186 (538)
Q Consensus 109 ~~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~~g--w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~~~ 186 (538)
..++.+.+.+|++|||+|.+|++.+.|+.+++++..| |+++++.+||+++|+.+.+.+...++...+.+++.++|+.+
T Consensus 90 ~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~ 169 (536)
T 1ju2_A 90 VSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHP 169 (536)
T ss_dssp ECTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCC
T ss_pred cCCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 7778888999999999999999999999998777778 99999999999999988777777788888999999999876
Q ss_pred CCCCccCCCCceeeeeeeeCCCCccccHHHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEe
Q 009272 187 YNGFTYDHLYGTKIGGTIIDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYL 266 (538)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~ 266 (538)
.++...+...++..+...++.+|.|+++..|++.+++.|++|++++.|++|++++++ ..+++||++.+.+|+.+++.+
T Consensus 170 ~~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~--~~~~~GV~~~~~~g~~~~~~v 247 (536)
T 1ju2_A 170 NHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAP--GLTATGVIYRDSNGTPHQAFV 247 (536)
T ss_dssp EEEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSS--SCBEEEEEEECTTSCEEEEEE
T ss_pred CCCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCC--CCEEEEEEEEeCCCceEEEEe
Confidence 554333444455554444457888988766777778899999999999999998631 138999999875676555532
Q ss_pred ccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCccCCCceEEeeCCCCccchhhHhhcccccc
Q 009272 267 RNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFG 346 (538)
Q Consensus 267 ~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (538)
+ ++++||||||+++||+||++||||+.++|+++||+++.|+|.||+|||||+...+.+..+.+......+..+...
T Consensus 248 ~--a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~~-- 323 (536)
T 1ju2_A 248 R--SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN-- 323 (536)
T ss_dssp E--EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEECS--
T ss_pred c--cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHHH--
Confidence 2 469999999999999999999999999999999999999999999999999887777655443211111111100
Q ss_pred ccccccCCC--------C-CCCCCCCCCCccceeeEeeecCcCcceEEEe-cCCCCCCCCeeecCCCCCHHHHHHHHHHH
Q 009272 347 SYIEGASGV--------N-FAGGSPSPRPYRGGFIFEKIIGPVSTGHLEL-RTRNPNDTPSVTFNYFKEPEDLQRCVQGI 416 (538)
Q Consensus 347 ~~~~~~~g~--------~-~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~d~~~~p~i~~~~~~~~~D~~~~~~~~ 416 (538)
.|.....|. . +...........+.++...++.|.|||+|+| +++||.+.|.|+++|+.++.|++.+.+++
T Consensus 324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~ 403 (536)
T 1ju2_A 324 DFYQCSFSSLPFTTPPFGFFPSSSYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGM 403 (536)
T ss_dssp SEEEEEEEECCCSSCCBTTBSSSCCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCChhhheeecCcccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHH
Confidence 111111110 0 0000000011123455667789999999999 88999999999999999999999999999
Q ss_pred HHHHHHHcCccccccccccc-hhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccCCCccCCCCcEec
Q 009272 417 STIEKIIESKSFSKFKYDNM-SVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLG 495 (538)
Q Consensus 417 ~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG~VVD~~~rv~g 495 (538)
+.+++++++.+++.+..... ..+.+.... ...|...++++++++|++....+.+|++|||+||+|||++|||||
T Consensus 404 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~-----~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG~VVD~~lrV~G 478 (536)
T 1ju2_A 404 KKIGELLSTDALKPYKVEDLPGVEGFNILG-----IPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTG 478 (536)
T ss_dssp HHHHHHHTSGGGGGGCSSCCSTTCSCCBSS-----SCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBTTTBCTTSBBTT
T ss_pred HHHHHHHcCccchhhhccccccCCCccccc-----cCCCcccCCHHHHHHHHHhccCccccCcCccCCccEECCCCeEcC
Confidence 99999999988887654321 000000000 002333468899999999999999999999999999999999999
Q ss_pred cCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhc
Q 009272 496 VDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS 537 (538)
Q Consensus 496 ~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~~~~ 537 (538)
++||||||+||||+.+++||++|+||||+|+|++|+++++.+
T Consensus 479 v~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~ 520 (536)
T 1ju2_A 479 INALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSAS 520 (536)
T ss_dssp CBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999887653
No 2
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.2e-76 Score=627.18 Aligned_cols=460 Identities=24% Similarity=0.345 Sum_probs=354.2
Q ss_pred CccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCCCCCcccchhhhhhh----cCCCCCCCCccccCCCceeecCc
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAEL----ADLSPTSPSQRFISEDGVVSTRA 119 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 119 (538)
+|||||||+|++||++|.||++ +.+|||||+|+.....+....+..+.... .+|.|.+.+|....++.+.+.+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 5999999999999999999998 79999999998764444444444333332 26889999999999999999999
Q ss_pred ccccchhhhcccccccCChhhhh-------cCCCChhhhhhhhhhhcccccc--------------C-----------CC
Q 009272 120 RVLGGGTCINAGFYTRAEPYYAR-------EAGWDGRLVNESYQWVEKKVVF--------------R-----------PP 167 (538)
Q Consensus 120 ~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~--------------~-----------~~ 167 (538)
++|||+|++|+|+|.|+.+.+++ ..+|.|+++.+||++.|+.... + +.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999885332 2679999999999999876421 0 11
Q ss_pred CchhHHHHHHHHHHc--CCCCCCCCccCCCCceeeeeeeeC---CCCccccHHH-HHh-hcCCCCeEEEeccEEEEEEec
Q 009272 168 MQRWQSALRDGLVEV--GVLPYNGFTYDHLYGTKIGGTIID---QNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILFR 240 (538)
Q Consensus 168 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~g~r~~~~~-~l~-~~~~~~~~i~~~~~V~~I~~~ 240 (538)
..+....+.++++++ |+.....+. .+...|...++ .+|.|+++.. |+. ..++.|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMG----TGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGG----GSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCC----CCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 245567888888888 875432211 11222222221 3788988765 665 667899999999999999998
Q ss_pred ----CCCCCCCeEEEEEEEeCCC-CeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCcc
Q 009272 241 ----NKGKARPVAHGVVFRDATD-AEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQG 315 (538)
Q Consensus 241 ----~~~~~~~~~~gV~~~~~~g-~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~ 315 (538)
+++ +|+||++.+.+| +.+++. ++|+||||||+|+||+|||+|||||+++|+++||+++.|+|.||+|
T Consensus 238 ~~~~g~~----rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~N 309 (566)
T 3fim_B 238 GTTNGLP----AFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRN 309 (566)
T ss_dssp EEETTEE----ECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCS
T ss_pred cCCCCCC----EEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhh
Confidence 313 899999997556 666665 5699999999999999999999999999999999999999999999
Q ss_pred CccCCCceEEeeCCCCccch------------hhHhh----cc-----ccccccccccCCC-C--------CCCCCCC--
Q 009272 316 MSDNPMNAIFVPSPVPVEVS------------LIQVV----GI-----TQFGSYIEGASGV-N--------FAGGSPS-- 363 (538)
Q Consensus 316 l~dh~~~~~~~~~~~~~~~~------------~~~~~----~~-----~~~~~~~~~~~g~-~--------~~~~~~~-- 363 (538)
||||+...+.+..+.+.... +.++. +. .....|....... . .....++
T Consensus 310 LqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~ 389 (566)
T 3fim_B 310 LSDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWE 389 (566)
T ss_dssp BBCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEE
T ss_pred hhcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhheeeeccccchhhhhhhccccccCCCCCEE
Confidence 99999877666544332110 11111 00 0001122110000 0 0000000
Q ss_pred --------------CCCccceeeEeeecCcCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCcccc
Q 009272 364 --------------PRPYRGGFIFEKIIGPVSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 429 (538)
Q Consensus 364 --------------~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 429 (538)
...-...++...++.|.|||+|+|+++||++.|.|+++|++++.|++.+.++++.++++++..+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~ 469 (566)
T 3fim_B 390 TIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWA 469 (566)
T ss_dssp EEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGT
T ss_pred EEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccC
Confidence 000112345567889999999999999999999999999999999999999999999999998888
Q ss_pred ccccccchhHHhhhhccCCCCCCCC--CCCCCHHHHHHHHHhccCCcccccccccCC------CccCCCCcEeccCCceE
Q 009272 430 KFKYDNMSVETLLNMTASMPLNLLP--KHSNTSTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRV 501 (538)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG------~VVD~~~rv~g~~nL~V 501 (538)
.+...+. .| ...++++++++|+|+...+.+|++|||+|| +|||+++||||++||||
T Consensus 470 ~~~~~~~----------------~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrV 533 (566)
T 3fim_B 470 DFVIRPF----------------DPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRI 533 (566)
T ss_dssp TTEEEES----------------SGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEE
T ss_pred Ccccccc----------------CCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEE
Confidence 7764331 12 245689999999999999999999999998 79999999999999999
Q ss_pred EecccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 009272 502 VDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 502 ~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 533 (538)
+|+||||+.+++||++|+||||+|+||.|+++
T Consensus 534 vDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 534 VDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988765
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=9.9e-75 Score=616.36 Aligned_cols=471 Identities=23% Similarity=0.296 Sum_probs=347.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCC-CCCCcccchhhhhhh---cCCCCCCCCccccCCCceeec
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPY-GNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVVST 117 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 117 (538)
.++|||||||||.+||++|.||++ +.+|||||+|+... ..+.+..+..+...+ .+|.|.+.+|. ..++.+.+.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeecc
Confidence 457999999999999999999998 68999999998432 234444444444333 36888887775 577888999
Q ss_pred CcccccchhhhcccccccCChhhhhc------C-CCChhhhhhhhhhhccccc---------------c-----------
Q 009272 118 RARVLGGGTCINAGFYTRAEPYYARE------A-GWDGRLVNESYQWVEKKVV---------------F----------- 164 (538)
Q Consensus 118 ~g~~lGG~s~~n~~~~~r~~~~~~~~------~-gw~~~~l~~~~~~~e~~~~---------------~----------- 164 (538)
+|++|||+|++|+|.|.|+.+.+++. . +|.|+++.+||++.|.... +
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~ 175 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGP 175 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBC
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecC
Confidence 99999999999999999999854332 4 8999999999999987631 0
Q ss_pred C---CCCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeeeCCCCccccHHH-HHh-hcCCCCeEEEeccEEEEEEe
Q 009272 165 R---PPMQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILF 239 (538)
Q Consensus 165 ~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~~~~i~~~~~V~~I~~ 239 (538)
. ....+..+.+.++++++|++....+......|..........+|.|+++.. |+. ..++.|++|++++.|+||++
T Consensus 176 ~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~ 255 (583)
T 3qvp_A 176 RDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLL 255 (583)
T ss_dssp CCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEe
Confidence 0 112456788889999999864322211111122111111224688888765 664 67789999999999999999
Q ss_pred cCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCccC
Q 009272 240 RNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDN 319 (538)
Q Consensus 240 ~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh 319 (538)
+.++ ...+++||++.+.+|+.+++. ++|+||||||+|+||+|||+|||||+++|+++||+++.|+| ||+|||||
T Consensus 256 d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH 329 (583)
T 3qvp_A 256 SQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQ 329 (583)
T ss_dssp ECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCC
T ss_pred ccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhC
Confidence 8421 012999999986678777775 56899999999999999999999999999999999999999 99999999
Q ss_pred CCceEEeeCCCCcc--------chhhHhhcc----------ccccccccc---cCCCC----------------CCCCCC
Q 009272 320 PMNAIFVPSPVPVE--------VSLIQVVGI----------TQFGSYIEG---ASGVN----------------FAGGSP 362 (538)
Q Consensus 320 ~~~~~~~~~~~~~~--------~~~~~~~~~----------~~~~~~~~~---~~g~~----------------~~~~~~ 362 (538)
+...+.+....+.. ..+....+. ...+.+... ..++. +....+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
T 3qvp_A 330 TTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDWIVNHNVA 409 (583)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSCCE
T ss_pred ccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHhhhccchhhhccCCCC
Confidence 98887776443200 000000000 000000000 00000 000000
Q ss_pred CCCCc----cceeeEeeecCcCcceEEEecCCCCCCCCee-ecCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccch
Q 009272 363 SPRPY----RGGFIFEKIIGPVSTGHLELRTRNPNDTPSV-TFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMS 437 (538)
Q Consensus 363 ~~~~~----~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 437 (538)
....+ ....+....+.|.|||+|+|+++||++.|.| +++|++++.|++.+.++++.++++++..+++.+...+..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 489 (583)
T 3qvp_A 410 YSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAGETI 489 (583)
T ss_dssp EEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEEE
T ss_pred cceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhccccccC
Confidence 00000 0112223347899999999999999999999 999999999999999999999999998888776543210
Q ss_pred hHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccCC-----CccCCCCcEeccCCceEEecccCCCCCC
Q 009272 438 VETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFYYSPG 512 (538)
Q Consensus 438 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG-----~VVD~~~rv~g~~nL~V~DaSv~P~~~~ 512 (538)
|.+.. ...++++++++|+|....+.+|++|||+|| +|||++|||||++||||+|+||||+.++
T Consensus 490 -----------pg~~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~ 557 (583)
T 3qvp_A 490 -----------PGDNL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMS 557 (583)
T ss_dssp -----------SGGGS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCS
T ss_pred -----------CCccc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCCeEEeecccCCCCCC
Confidence 00011 123689999999999999999999999999 7999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHh
Q 009272 513 TNPQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 513 ~NP~~Ti~ala~r~a~~i~~~ 533 (538)
+||++|++|||+|+||.|+++
T Consensus 558 ~n~~~t~~aiaeraAd~I~~~ 578 (583)
T 3qvp_A 558 SHVMTVFYAMALKISDAILED 578 (583)
T ss_dssp SCSHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988765
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=3.2e-72 Score=597.80 Aligned_cols=458 Identities=22% Similarity=0.314 Sum_probs=338.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCC-CCCCCcccchhhhhhh---cCCCCCCCCccccCCCcee--
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSP-YGNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVV-- 115 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 115 (538)
.++|||||||||.+||++|.||++ + .+|||||+|+.. ...+.+..+..+.... .+|.|.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 457999999999999999999999 6 799999999863 2222233333333222 14555443 2334444
Q ss_pred ----ecCcccccchhhhcccccccCChhhhh------cCCCChhhhhhhhhhhccccccC--------------------
Q 009272 116 ----STRARVLGGGTCINAGFYTRAEPYYAR------EAGWDGRLVNESYQWVEKKVVFR-------------------- 165 (538)
Q Consensus 116 ----~~~g~~lGG~s~~n~~~~~r~~~~~~~------~~gw~~~~l~~~~~~~e~~~~~~-------------------- 165 (538)
+.+||+|||+|++|+|.|.|+.+.+++ ..+|.|+++.+||++.|......
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 899999999999999999999985443 26799999999999988654211
Q ss_pred CC----CchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeee---CCCCccccHHHHHhhcCCCCeEEEeccEEEEEE
Q 009272 166 PP----MQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTII---DQNSQRHTAADLLEYANPSGLTVLLHASVHKIL 238 (538)
Q Consensus 166 ~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~ 238 (538)
+. ..++.+.+.++++++|+.....+ ..+...|.... ...|.|+++..| ..++.|++|++++.|++|+
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~----n~~~~~G~~~~~~~~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~ 233 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENI----YDGEMDGLTHCCDTIYRGQRSGSFLF--VKNKPNITIVPEVHSKRLI 233 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCC----SSSCCCEEEECEESEETTEECCGGGG--SSSCTTEEEECSEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCC----CCCCcCeEEeecceecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEE
Confidence 00 12356677888899998643221 11222222111 135778765544 3567899999999999999
Q ss_pred ecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCcc
Q 009272 239 FRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSD 318 (538)
Q Consensus 239 ~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~d 318 (538)
++..+ .+++||++.+.+|+.+++. ++|+||||||+|+||+|||+|||||+++|+++||+++.|+|.||+||||
T Consensus 234 ~~~~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 234 INEAD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EETTT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EeCCC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 98421 2999999987667777765 5589999999999999999999999999999999999999999999999
Q ss_pred CCCceEEeeCCCCccch-------------hhHhh----cc-----cccccccccc----------------CCC-C-CC
Q 009272 319 NPMNAIFVPSPVPVEVS-------------LIQVV----GI-----TQFGSYIEGA----------------SGV-N-FA 358 (538)
Q Consensus 319 h~~~~~~~~~~~~~~~~-------------~~~~~----~~-----~~~~~~~~~~----------------~g~-~-~~ 358 (538)
|+...+.+..+.+.... +.++. +. .....|.... ... . ..
T Consensus 307 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (577)
T 3q9t_A 307 HPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSP 386 (577)
T ss_dssp CEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCT
T ss_pred CcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchhheeEEeecChhhhcchhhhhhhhccccccccCC
Confidence 99888777654432110 01110 00 0000111000 000 0 00
Q ss_pred CCCCC-------------------CCCccceeeEeeecCcCcce-EEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHH
Q 009272 359 GGSPS-------------------PRPYRGGFIFEKIIGPVSTG-HLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIST 418 (538)
Q Consensus 359 ~~~~~-------------------~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~ 418 (538)
...++ ...-...++...++.|.||| +|+|+++||.+.|.|+++|++++.|++.+.++++.
T Consensus 387 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~ 466 (577)
T 3q9t_A 387 LGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRF 466 (577)
T ss_dssp TSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHH
T ss_pred CCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHH
Confidence 00000 00011234556778999999 99999999999999999999999999999999999
Q ss_pred HHHHH-cCccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccCC-----CccCCCCc
Q 009272 419 IEKII-ESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYK 492 (538)
Q Consensus 419 ~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG-----~VVD~~~r 492 (538)
+++++ +..+++.+...+.. .+...++++++++|+|+...+.+|++|||+|| +|||+++|
T Consensus 467 ~~~i~~~~~~~~~~~~~e~~---------------p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lr 531 (577)
T 3q9t_A 467 SYDLLFKGEGFKDLVESEYP---------------WEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLK 531 (577)
T ss_dssp HHHHHHHSTTGGGTEEEEES---------------SCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCB
T ss_pred HHHHHHhChhhhhccccccC---------------CCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCe
Confidence 99999 88888877654311 11245789999999999999999999999999 59999999
Q ss_pred EeccCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 009272 493 VLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 493 v~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 533 (538)
|||++||||||+||||+.+++||++|+||||+|+||.|+++
T Consensus 532 V~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 532 VHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp BTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999988865
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.4e-70 Score=585.80 Aligned_cols=461 Identities=24% Similarity=0.368 Sum_probs=345.3
Q ss_pred CCCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCCCCCcccchhhhhh---hcCCCCCCCCccccCCCceeecC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAE---LADLSPTSPSQRFISEDGVVSTR 118 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 118 (538)
..+|||||||||++||++|.||++ +.+|||||+|+... .+.+..+..+... ..+|.|.+.+|....++.+.+.+
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~r 93 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWAR 93 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEeccC
Confidence 347999999999999999999998 68999999998643 2333334333322 22577888899999999999999
Q ss_pred cccccchhhhcccccccCChhhhhc-------CCCChhhhhhhhhhhccccccC----------------CCCchhHHHH
Q 009272 119 ARVLGGGTCINAGFYTRAEPYYARE-------AGWDGRLVNESYQWVEKKVVFR----------------PPMQRWQSAL 175 (538)
Q Consensus 119 g~~lGG~s~~n~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~e~~~~~~----------------~~~~~~~~~~ 175 (538)
|++|||+|.+|++.+.|+.+.+|+. .+|.|+++.+||++.|...... ....+..+.+
T Consensus 94 G~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~ 173 (526)
T 3t37_A 94 GRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAF 173 (526)
T ss_dssp BCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHH
T ss_pred ccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHH
Confidence 9999999999999999999864432 4699999999999999764321 1234567888
Q ss_pred HHHHHHcCCCCCCCCccCCCCceeeeeeeeCCCCccccHHH-HH-h-hcCCCCeEEEeccEEEEEEecCCCCCCCeEEEE
Q 009272 176 RDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTAAD-LL-E-YANPSGLTVLLHASVHKILFRNKGKARPVAHGV 252 (538)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~-~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV 252 (538)
.+...++|+............++... ......|.|.+... ++ + ...+.|++|++++.|++|+++++ +++||
T Consensus 174 ~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv 247 (526)
T 3t37_A 174 IEAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSL 247 (526)
T ss_dssp HHHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEE
T ss_pred HHHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEE
Confidence 89999999865432222111111111 11123566666654 44 3 45788999999999999999987 99999
Q ss_pred EEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCccCCCceEEee-CCCC
Q 009272 253 VFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFVP-SPVP 331 (538)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh~~~~~~~~-~~~~ 331 (538)
++.+. +....+ .+++||||||+|+||+|||+||||++.+|.++||+++.++|.||+||+||+.....+. ...+
T Consensus 248 ~~~~~-~~~~~~-----~a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~ 321 (526)
T 3t37_A 248 EVVGR-QGSAEV-----FADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKP 321 (526)
T ss_dssp EEEET-TEEEEE-----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSC
T ss_pred EEEec-CceEEE-----eecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCC
Confidence 99874 333444 4799999999999999999999999999999999999999999999999986554332 2222
Q ss_pred ccchhhHh---hcccccccccccc-------CC--CCCCCCCCCCCCccceeeEeeecCcCcceEEEecCCCCCCCCeee
Q 009272 332 VEVSLIQV---VGITQFGSYIEGA-------SG--VNFAGGSPSPRPYRGGFIFEKIIGPVSTGHLELRTRNPNDTPSVT 399 (538)
Q Consensus 332 ~~~~~~~~---~~~~~~~~~~~~~-------~g--~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~ 399 (538)
........ ..+.....+.... .+ .........+.......+...+..|.|+|+|++++.|+.+.|.|+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~ 401 (526)
T 3t37_A 322 VPPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSESFPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIID 401 (526)
T ss_dssp CCCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCTTSCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEE
T ss_pred cchHhhcchhhhhhhhcccccccCCcceeeecccccccccccccccCCcceeeeccccCccccCcceeccCCCccCceec
Confidence 21110000 0000000000000 00 000000111111223345556789999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccc
Q 009272 400 FNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHG 479 (538)
Q Consensus 400 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~G 479 (538)
++|+.++.|++.+.++++.+++++....++.+...+ ..|....+++++++|++....+.+|++|
T Consensus 402 ~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~~pg~~~~~~~~~~~ir~~~~t~~H~~G 465 (526)
T 3t37_A 402 PAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------LLPGTPNSAAEMDDFIARSVITHHHPCG 465 (526)
T ss_dssp CCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------CSSCCCCSHHHHHHHHHHHEEECSCCBC
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------cCCCCCCCHHHHHHHHHhcCccCcccCc
Confidence 999999999999999999999999988777765543 3454557889999999999999999999
Q ss_pred cccCC----CccCCCCcEeccCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 009272 480 GCQVG----KVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 480 t~~mG----~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 533 (538)
||||| +|||++|||||++|||||||||||+.+++||++||||||||+||+.-.-
T Consensus 466 TcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~~ 523 (526)
T 3t37_A 466 TCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHHH 523 (526)
T ss_dssp TTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhcc
Confidence 99999 5999999999999999999999999999999999999999999987643
No 6
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=3.6e-70 Score=586.79 Aligned_cols=472 Identities=22% Similarity=0.275 Sum_probs=347.0
Q ss_pred CCCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCCCCCcc-cchhhhhhh---cCCCCCCCCccccCCCceeec
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNIT-NSGSFSAEL---ADLSPTSPSQRFISEDGVVST 117 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 117 (538)
..+|||||||+|++|+++|.+|++ |.+|+|||+|+.....+... .+..+...+ .+|.+.+.+ ...++.+.+.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 357999999999999999999998 79999999998754333333 333332222 245555444 4567888999
Q ss_pred CcccccchhhhcccccccCChhhhh-------cCCCChhhhhhhhhhhcccccc-----------CC-------------
Q 009272 118 RARVLGGGTCINAGFYTRAEPYYAR-------EAGWDGRLVNESYQWVEKKVVF-----------RP------------- 166 (538)
Q Consensus 118 ~g~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~-----------~~------------- 166 (538)
+|++|||+|.+|++++.|+.+.+++ ..+|.++++.|||++.|+.+.. .+
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 9999999999999999999985443 1479999999999999987642 10
Q ss_pred -----CCchhHHHHHHHHHHcCCCCCCCCccCCCCceeeeeeeeCCCCccccHHH-HHh-hcCCCCeEEEeccEEEEEEe
Q 009272 167 -----PMQRWQSALRDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILF 239 (538)
Q Consensus 167 -----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~~~~i~~~~~V~~I~~ 239 (538)
...+..+.+.++++++|+.....+......++.........+|.|+++.. |+. .+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 22456788899999999875432221111222211111124688988765 774 66788999999999999999
Q ss_pred cCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCccC
Q 009272 240 RNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDN 319 (538)
Q Consensus 240 ~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh 319 (538)
++++ ...+++||++.+.+|+.+++. ++|+||||||+|+||+||++|||||+++|+++||+++.|+| ||+||+||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 7521 012899999986567766665 34999999999999999999999999999999999999999 99999999
Q ss_pred CCceEEeeCCCCccc---------hhhHhh----ccc-----ccccccccc---CC-CC-----------C----CCCCC
Q 009272 320 PMNAIFVPSPVPVEV---------SLIQVV----GIT-----QFGSYIEGA---SG-VN-----------F----AGGSP 362 (538)
Q Consensus 320 ~~~~~~~~~~~~~~~---------~~~~~~----~~~-----~~~~~~~~~---~g-~~-----------~----~~~~~ 362 (538)
+...+.+..+.+... ....+. ++. ....|.... .+ .. + ...++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (587)
T 1gpe_A 334 TTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDEDVA 413 (587)
T ss_dssp EEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHSCCE
T ss_pred cccceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccccccceeeEeecccccccccccccccccHHHHhhhccCCCCc
Confidence 988777655432110 000000 000 000111100 00 00 0 00000
Q ss_pred CCC----CccceeeEeeecCcCcceEEEecCCCCCCCC-eeecCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccch
Q 009272 363 SPR----PYRGGFIFEKIIGPVSTGHLELRTRNPNDTP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMS 437 (538)
Q Consensus 363 ~~~----~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 437 (538)
..+ .....++...++.|.|||+|+|+++||++.| .|+++|+.++.|++.+.++++.+++++++.+++.+...+..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 493 (587)
T 1gpe_A 414 FAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGETL 493 (587)
T ss_dssp EEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEEE
T ss_pred ceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcccccC
Confidence 000 0011234456778999999999999999999 99999999999999999999999999999888776543210
Q ss_pred hHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccCC-----CccCCCCcEeccCCceEEecccCCCCCC
Q 009272 438 VETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFYYSPG 512 (538)
Q Consensus 438 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG-----~VVD~~~rv~g~~nL~V~DaSv~P~~~~ 512 (538)
|.... ...++++++++|++....+.+|++|||+|| +|||++|||||++||||+|+||||+.++
T Consensus 494 -----------pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~ 561 (587)
T 1gpe_A 494 -----------PGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVS 561 (587)
T ss_dssp -----------SGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCS
T ss_pred -----------CCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeeccCCCCCC
Confidence 00001 123688999999999989999999999999 4999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHhhh
Q 009272 513 TNPQATVMMLGRYMGVRILSERL 535 (538)
Q Consensus 513 ~NP~~Ti~ala~r~a~~i~~~~~ 535 (538)
+||++|+||||+|+||.|+++..
T Consensus 562 ~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 562 SHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999987643
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.4e-68 Score=570.67 Aligned_cols=460 Identities=28% Similarity=0.421 Sum_probs=342.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCCCCCcccchhhhhhh---cCCCCCCCCccccCCCceeecCc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYGNPNITNSGSFSAEL---ADLSPTSPSQRFISEDGVVSTRA 119 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 119 (538)
..|||||||+|++|+++|.+|++ +.+|+|||+|+..........+..+...+ .+|.+.+.++.. .++.+.+.+|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 47999999999999999999999 68999999998653211122222232222 246666666766 7788999999
Q ss_pred ccccchhhhcccccccCChhhhh-------cCCCChhhhhhhhhhhcccccc------C-----------CCCchhHHHH
Q 009272 120 RVLGGGTCINAGFYTRAEPYYAR-------EAGWDGRLVNESYQWVEKKVVF------R-----------PPMQRWQSAL 175 (538)
Q Consensus 120 ~~lGG~s~~n~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~e~~~~~------~-----------~~~~~~~~~~ 175 (538)
++|||+|.+|++.+.|+.+.+++ ..+|.++++.|||++.|+.+.. . +...+..+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 99999999999999999884332 1479999999999999986541 1 1234567888
Q ss_pred HHHHHHcCCCCCCCCccCC--CCceeeeeeeeCCCCccccHHH-HHhh-cCCCCeEEEeccEEEEEEecCCCCCCCeEEE
Q 009272 176 RDGLVEVGVLPYNGFTYDH--LYGTKIGGTIIDQNSQRHTAAD-LLEY-ANPSGLTVLLHASVHKILFRNKGKARPVAHG 251 (538)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~g~r~~~~~-~l~~-~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~g 251 (538)
.++++++|++.. .+.... +.++......+..+|.|+++.. |+.. .++.|++|++++.|++|++++++ +++|
T Consensus 171 ~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCTG 245 (546)
T ss_dssp HHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEEE
T ss_pred HHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEEE
Confidence 899999998754 221111 2222221111222788887654 7764 45789999999999999998733 8999
Q ss_pred EEEEeCC-CCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCceeecCcccCccCccCCCceEEeeCCC
Q 009272 252 VVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVVLDQPLVGQGMSDNPMNAIFVPSPV 330 (538)
Q Consensus 252 V~~~~~~-g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~ 330 (538)
|++.+.. |+.+++. +.|+||||||+++||+||++|||||+++|+++||+++.|+|.||+||+||+...+.+..+.
T Consensus 246 V~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~ 321 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQ 321 (546)
T ss_dssp EEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESS
T ss_pred EEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecC
Confidence 9998632 6666664 3359999999999999999999999999999999999999999999999998877765543
Q ss_pred CccchhhHhhccccccccccccCC------------CCCC---CCCCCCCCccceeeEeeecCcCcceEEEecCCCCCCC
Q 009272 331 PVEVSLIQVVGITQFGSYIEGASG------------VNFA---GGSPSPRPYRGGFIFEKIIGPVSTGHLELRTRNPNDT 395 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~---~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~ 395 (538)
+..... ......+.|.....+ ..+. .............+...++.|.|+|+|+|+++||++.
T Consensus 322 ~~~~~~---~~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~ 398 (546)
T 2jbv_A 322 PMVAES---TQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRDK 398 (546)
T ss_dssp CCCSCC---SSSCCEEEEECSSTTCSSCSEEEEEESSCCCTTTGGGTCCCCSSEEEEEEEETTCCCCBEEECSSSCTTSC
T ss_pred CCcccc---cchhheEEEEecCCCCCCCceEEEeccccccccccccCccCCCCeEEEEEEEcccCcccEEEecCCCCCCC
Confidence 321100 000001111111000 0000 0000000112233445678999999999999999999
Q ss_pred CeeecCCCCCHH--HHHHHHHHHHHHHHHHcCccccccccccchhHHhhhhccCCCCCCCC-CCCCCHHHHHHHHHhccC
Q 009272 396 PSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLP-KHSNTSTSLEQFCRDTVM 472 (538)
Q Consensus 396 p~i~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~ 472 (538)
|.|+++|+.++. |++.+.++++.+++++++.+++.+...+. .| ...++++++++|++....
T Consensus 399 P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------~p~~~~~sd~~~~~~ir~~~~ 462 (546)
T 2jbv_A 399 PMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL----------------SPGVEAQTDEELQDYIRKTHN 462 (546)
T ss_dssp CEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE----------------ESCTTCCSHHHHHHHHHHHCE
T ss_pred ceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc----------------cCCCCCCCHHHHHHHHHhcCC
Confidence 999999999999 99999999999999999988877653321 12 134688999999999989
Q ss_pred CcccccccccCC------CccCCCCcEeccCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 009272 473 TIWHYHGGCQVG------KVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 473 ~~~H~~Gt~~mG------~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 533 (538)
+.+|++|||+|| +|||++|||||++||||+|+||||+.+++||++|++|||+|+||.|+++
T Consensus 463 ~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 529 (546)
T 2jbv_A 463 TVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSA 529 (546)
T ss_dssp ECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC---
T ss_pred cccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhh
Confidence 999999999999 7999999999999999999999999999999999999999999999875
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=3.3e-59 Score=500.58 Aligned_cols=449 Identities=22% Similarity=0.258 Sum_probs=304.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCCCcc--------------cchhhh-hhhcCCCCCCCCcc
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNIT--------------NSGSFS-AELADLSPTSPSQR 107 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~~ 107 (538)
..+|||||||||++|+++|.+|++ |.+|+|||+|+......... ..+.+. ..+.. ...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~ 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD------SNP 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC------SCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC------CCc
Confidence 457999999999999999999999 99999999998543111000 000110 01100 000
Q ss_pred ccCCCceeecCcccccchhhhcccccccCChhhhhc-----CCCChhhhhhhhhhhccccccC--C------CCchhHHH
Q 009272 108 FISEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE-----AGWDGRLVNESYQWVEKKVVFR--P------PMQRWQSA 174 (538)
Q Consensus 108 ~~~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~-----~gw~~~~l~~~~~~~e~~~~~~--~------~~~~~~~~ 174 (538)
........+.++++|||+|.+|++.+.|+.+.+++. .+|.+++ +||++.+..+... + ...+....
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 011123556789999999999999999998755443 2355555 8999887743211 0 12344567
Q ss_pred HHHHHHHcCCCCCCCC-cc-CCCCceeeeeeeeCCCCccccHHH-HHh-hcCCCCeEEEeccEEEEEEecCCCCCCCeEE
Q 009272 175 LRDGLVEVGVLPYNGF-TY-DHLYGTKIGGTIIDQNSQRHTAAD-LLE-YANPSGLTVLLHASVHKILFRNKGKARPVAH 250 (538)
Q Consensus 175 ~~~~~~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~ 250 (538)
+.++++++|+...... .. ....++... .+...+|.|+++.. |+. ..++.|++|++++.|++|+++++ +++
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~-~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~ 230 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYS-AFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QIL 230 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEEC-CBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeee-eeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEE
Confidence 7888888887532100 00 011111111 11114688887654 776 44568999999999999999865 999
Q ss_pred EEEEEeC-CCCeE--EEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhC------CCcee-----ecCcccCccC
Q 009272 251 GVVFRDA-TDAEH--IAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAH------NITVV-----LDQPLVGQGM 316 (538)
Q Consensus 251 gV~~~~~-~g~~~--~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~------gi~~~-----~~~p~vG~~l 316 (538)
||++.+. +|+.+ ++. ++++||||||+++||+||++||||++.+|+++ ||+++ .|+| ||+||
T Consensus 231 gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL 305 (546)
T 1kdg_A 231 GVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNA 305 (546)
T ss_dssp EEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTB
T ss_pred EEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCc
Confidence 9999753 35432 333 57999999999999999999999999999999 58874 7999 99999
Q ss_pred ccCCCceEEeeCCCC-ccch------------hhHhh----ccccc----cccccccC---CC----C--CCCC---CCC
Q 009272 317 SDNPMNAIFVPSPVP-VEVS------------LIQVV----GITQF----GSYIEGAS---GV----N--FAGG---SPS 363 (538)
Q Consensus 317 ~dh~~~~~~~~~~~~-~~~~------------~~~~~----~~~~~----~~~~~~~~---g~----~--~~~~---~~~ 363 (538)
+||+...+.+..+.. .... ...+. +.... ..|+.... +. . +.+. ...
T Consensus 306 ~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (546)
T 1kdg_A 306 QDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASPKLNFWRAYSGSDGFTRYAQGTVRPGAASVNS 385 (546)
T ss_dssp BCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSCCEEEEEEEECTTSCEEEEEEEEEESCSCCCC
T ss_pred ccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCcceEEEEccCCCCcchhhhhheeccccccccc
Confidence 999988777653211 0000 00110 00000 00111000 00 0 0000 000
Q ss_pred C---CCccceeeEeeecCc-CcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccchhH
Q 009272 364 P---RPYRGGFIFEKIIGP-VSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYDNMSVE 439 (538)
Q Consensus 364 ~---~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 439 (538)
. .......+...+..| .|+|+|+|+++| ..|.++++|+.++.|++.+.++++.+++++++.+...+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~------- 456 (546)
T 1kdg_A 386 SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTMI------- 456 (546)
T ss_dssp SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEEE-------
T ss_pred ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCccccc-------
Confidence 0 000112333445667 999999998877 457788899999999999999999999999876432211
Q ss_pred HhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccCC-----CccCCCCcEeccCCceEEecccCCCCCCCc
Q 009272 440 TLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVVDGSTFYYSPGTN 514 (538)
Q Consensus 440 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG-----~VVD~~~rv~g~~nL~V~DaSv~P~~~~~N 514 (538)
.|....+++++.++++....+.+|++|||+|| +|||++|||||++||||+||||||+.+++|
T Consensus 457 -------------~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~n 523 (546)
T 1kdg_A 457 -------------TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGN 523 (546)
T ss_dssp -------------ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSC
T ss_pred -------------CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCcc
Confidence 11123567888888888888999999999999 699999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q 009272 515 PQATVMMLGRYMGVRILSE 533 (538)
Q Consensus 515 P~~Ti~ala~r~a~~i~~~ 533 (538)
|++|+||||+|+||.|+++
T Consensus 524 p~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 524 PQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp SHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998865
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.9e-58 Score=485.65 Aligned_cols=439 Identities=18% Similarity=0.193 Sum_probs=293.2
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC-CCCcccchhhh--hhhcCCCCCCCCc--------------
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG-NPNITNSGSFS--AELADLSPTSPSQ-------------- 106 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-------------- 106 (538)
.+||+||||+|++|+++|.+|++ |.+|+|||+|+.... .+....+.... ....+|.+.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 46999999999999999999999 999999999986542 32222222111 1112455554433
Q ss_pred --ccc------CCCceeecCcccccchhhhcccccccCChhhhhc--CCCChhhhh-hhhhhhccccccCCCC-------
Q 009272 107 --RFI------SEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE--AGWDGRLVN-ESYQWVEKKVVFRPPM------- 168 (538)
Q Consensus 107 --~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~e~~~~~~~~~------- 168 (538)
.+. .++.+.+.+|++|||+|.+|++.+.|+.+.+++. .+|.++++. |||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 5667889999999999999999999999976653 678889999 9999999987654322
Q ss_pred --chhHHHHHHHHHHcCCCCC----C-CCc------cCCCCceeeee--eeeCCCCccccHH-HHHh-hcCCCCeEEEec
Q 009272 169 --QRWQSALRDGLVEVGVLPY----N-GFT------YDHLYGTKIGG--TIIDQNSQRHTAA-DLLE-YANPSGLTVLLH 231 (538)
Q Consensus 169 --~~~~~~~~~~~~~~g~~~~----~-~~~------~~~~~~~~~~~--~~~~~~g~r~~~~-~~l~-~~~~~~~~i~~~ 231 (538)
.+..+.+.++++++|+.+. + .+. ......|...+ .....+| |.++. .|++ ..++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 2445778889999998421 1 000 00000111000 0001467 77754 4776 445668999999
Q ss_pred cEEEEEEecCCCCCCCeEEEEEEEeCCC---CeEEEEeccCCCceEEEcCCCcCCHHHHHHcC-CCChhhhhhCCCceee
Q 009272 232 ASVHKILFRNKGKARPVAHGVVFRDATD---AEHIAYLRNGPKNEIIVSAGALGSPQLLMLSG-VGPADHLKAHNITVVL 307 (538)
Q Consensus 232 ~~V~~I~~~~~~~~~~~~~gV~~~~~~g---~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SG-ig~~~~l~~~gi~~~~ 307 (538)
+.|++|++++++ .+++||++.+.+| +..++ .+++||||||+++||+||++|| +| +|++.
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v-----~A~~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~- 305 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEI-----SCRYLFLGAGSLGSTELLVRARDTG--------TLPNL- 305 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEE-----EEEEEEECSHHHHHHHHHHHHHHTT--------SSTTC-
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEE-----eeCEEEEccCCCCCHHHHHhccccC--------CCCCC-
Confidence 999999998631 2899999986556 34444 3679999999999999999999 87 45544
Q ss_pred cCcccCccCccCCCceEEeeCCCCccchhhHhhcccccccccccc-CCCCCC-CCCCCCCCc-cceeeEeeecCcCcceE
Q 009272 308 DQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEGA-SGVNFA-GGSPSPRPY-RGGFIFEKIIGPVSTGH 384 (538)
Q Consensus 308 ~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~-~~~~~~~~~~~p~s~g~ 384 (538)
++.||+||+||+...+.+..........+. +......+.... ...... .....+..+ ....++..+..|.|+|+
T Consensus 306 -~~~VG~nl~dh~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srG~ 382 (504)
T 1n4w_A 306 -NSEVGAGWGPNGNIMTARANHMWNPTGAHQ--SSIPALGIDAWDNSDSSVFAEIAPMPAGLETWVSLYLAITKNPQRGT 382 (504)
T ss_dssp -CTTTTCCBBCTTCEEEEEECCTTCCCCSCC--CSSCCEEEEECCSSTTCEEEEEECCCCSSCCCEEEEEEEECCCCCBC
T ss_pred -ChhhccccccCCcceeeeccCCCCcccCcC--CCccEEEEeccCCCCCceEEEeccCChHHHhhhhhheeeeccCCCcE
Confidence 458999999999766543321100000000 000000000000 000000 000000000 12233445667999999
Q ss_pred EEecCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHcCccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHH
Q 009272 385 LELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSL 463 (538)
Q Consensus 385 v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 463 (538)
|+|+++|+ .|+++|+.++ | +.+.++++ .++++++..+. + ... +. .... +
T Consensus 383 V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~-~~~------------------~~--~~~~-~ 432 (504)
T 1n4w_A 383 FVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I-YRY------------------DL--FGTQ-L 432 (504)
T ss_dssp EEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C-BCC------------------SS--SSSS-C
T ss_pred EEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C-cCC------------------ch--hhhh-h
Confidence 99988664 7899999998 8 77888888 88888877653 1 100 00 0000 0
Q ss_pred HHHHHhccCCcccccccccCCCccCCCCcEeccCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhc
Q 009272 464 EQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS 537 (538)
Q Consensus 464 ~~~~~~~~~~~~H~~Gt~~mG~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~~~~ 537 (538)
+. ....+.+|++|||+||+|||++|||||++||||+|+||||+.+++||++|+||||+|+||+|+++...+
T Consensus 433 ~~---~~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 503 (504)
T 1n4w_A 433 KA---FADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVTA 503 (504)
T ss_dssp CS---EECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC--
T ss_pred hh---hccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhccC
Confidence 00 034678999999999999999999999999999999999999999999999999999999999876543
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.2e-57 Score=482.57 Aligned_cols=430 Identities=17% Similarity=0.193 Sum_probs=290.4
Q ss_pred CCCCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC-CCCcccchhhhh-----hhcCCCCCCCCc-------
Q 009272 41 AKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG-NPNITNSGSFSA-----ELADLSPTSPSQ------- 106 (538)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~------- 106 (538)
+.+..+||+||||+|++|+++|.+|++ |.+|+|||+|..... .+.. ..|.. ...+|.+.+.+|
T Consensus 6 ~~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~---~~~~~~~~~~~~~~w~~~~~pq~~~~~~~ 82 (507)
T 1coy_A 6 LADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDG---KIFCGMLNPDKRSMWLADKTDQPVSNFMG 82 (507)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTS---CSSCCSSSCCTTSBBSCSBCCCSSCSBTT
T ss_pred CCcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCcc---ccccccccccccccccccccccccccccc
Confidence 344568999999999999999999999 999999999985431 1100 01111 112355555443
Q ss_pred --------ccc------CCCceeecCcccccchhhhcccccccCChhhhhc--CCCChhhhh-hhhhhhccccccCCCC-
Q 009272 107 --------RFI------SEDGVVSTRARVLGGGTCINAGFYTRAEPYYARE--AGWDGRLVN-ESYQWVEKKVVFRPPM- 168 (538)
Q Consensus 107 --------~~~------~~~~~~~~~g~~lGG~s~~n~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~e~~~~~~~~~- 168 (538)
.+. .++.+.+.+|++|||+|.+|++++.|+.+.+++. .+|.++++. |||+++|+.+...+..
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~ 162 (507)
T 1coy_A 83 FGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQ 162 (507)
T ss_dssp BSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred cccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCC
Confidence 333 5667888999999999999999999999976553 578889999 9999999987654432
Q ss_pred --------chhHHHHHHHHHHcCCCCCC-----CC--------c----cCCCCceeeeeeeeCCCCccccHH-HHHh-hc
Q 009272 169 --------QRWQSALRDGLVEVGVLPYN-----GF--------T----YDHLYGTKIGGTIIDQNSQRHTAA-DLLE-YA 221 (538)
Q Consensus 169 --------~~~~~~~~~~~~~~g~~~~~-----~~--------~----~~~~~~~~~~~~~~~~~g~r~~~~-~~l~-~~ 221 (538)
.+..+.+.++++++|+.+.. .+ . +..+..|..+ ..+| |+++. .|++ +.
T Consensus 163 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~g----c~~g-R~s~~~~~l~~a~ 237 (507)
T 1coy_A 163 AWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYG----NNAG-KKSLDKTYLAQAA 237 (507)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTC----CSSS-BCCTTTTHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCcccccccccc----CCCC-CcChHHHHHHHHH
Confidence 23457788899999984211 00 0 0011111111 1467 87754 4776 44
Q ss_pred CCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCC---eEEEEeccCCCceEEEcCCCcCCHHHHHHcC-CCChhh
Q 009272 222 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDA---EHIAYLRNGPKNEIIVSAGALGSPQLLMLSG-VGPADH 297 (538)
Q Consensus 222 ~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~---~~~~~~~~~~a~~VVLaaGai~tp~lLl~SG-ig~~~~ 297 (538)
++.|++|++++.|++|++++++ .+++||++.+.+|. .+++ .+++||||||+++||+||++|| ||+
T Consensus 238 ~~~n~~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~-----~A~~VIlaaGa~~sp~lL~~Sg~iG~--- 306 (507)
T 1coy_A 238 ATGKLTITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVV-----TADRVFFAAGSVGTSKLLVSMKAQGH--- 306 (507)
T ss_dssp HTTCEEEECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEE-----EEEEEEECSHHHHHHHHHHHHHHTTS---
T ss_pred hcCCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEE-----EeCEEEEccCccCCHHHHHhcccCCC---
Confidence 5678999999999999998631 27999999864553 3444 3679999999999999999999 873
Q ss_pred hhhCCCceeecCcccCccCccCCCceEEee-CC-CCccc--hhhHhhcccccc----ccccccCCCCCCCCCCCCCCccc
Q 009272 298 LKAHNITVVLDQPLVGQGMSDNPMNAIFVP-SP-VPVEV--SLIQVVGITQFG----SYIEGASGVNFAGGSPSPRPYRG 369 (538)
Q Consensus 298 l~~~gi~~~~~~p~vG~~l~dh~~~~~~~~-~~-~~~~~--~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~ 369 (538)
++ ...+.||+||++|+....... .. ++... ......++..+. .+..... .+...+ . ..
T Consensus 307 -----lp--nl~d~VG~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~--~~ 372 (507)
T 1coy_A 307 -----LP--NLSSQVGEGWGNNGNIMVGRANHMWDATGSKQATIPTMGIDNWADPTAPIFAEIA--PLPAGL---E--TY 372 (507)
T ss_dssp -----ST--TSCTTTTCCBBCTTEEEEEEECCTTSCCCSCCCSSCCEEEECTTCTTSCEEEEEE--CCCCSS---C--CC
T ss_pred -----CC--ccChhhCCccccCCcccccccccccccccccCCCcceEEEeccCCCCCCcEEEec--cCCHHH---h--hh
Confidence 22 124579999999986433211 11 11000 000000000000 0000000 000000 0 11
Q ss_pred eeeEeeecCcCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHcCccccccccccchhHHhhhhccCC
Q 009272 370 GFIFEKIIGPVSTGHLELRTRNPNDTPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYDNMSVETLLNMTASM 448 (538)
Q Consensus 370 ~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (538)
..++..+..|.++|+|+|+++|+ .|+++|+.++ | ..+.++++ .++++++..+. +...+
T Consensus 373 ~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~------------- 431 (507)
T 1coy_A 373 VSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRTD------------- 431 (507)
T ss_dssp EEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCSS-------------
T ss_pred eeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccCc-------------
Confidence 23334556799999999987654 8999999999 8 45666666 88899887652 22111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhccCCcccccccccCCCccCCCCcEeccCCceEEecccCCCCCCCchHHHHHHHHHHHHH
Q 009272 449 PLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGV 528 (538)
Q Consensus 449 ~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~mG~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~ 528 (538)
. ..+++ ++| ...+.+|++|||+||+|||++|||||++||||||+||||+.+++||++||+|||+|+||
T Consensus 432 ----~---~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd 499 (507)
T 1coy_A 432 ----L---FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMD 499 (507)
T ss_dssp ----C---C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHH
T ss_pred ----c---cccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHH
Confidence 0 00000 112 34678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhh
Q 009272 529 RILSERLA 536 (538)
Q Consensus 529 ~i~~~~~~ 536 (538)
+|++++++
T Consensus 500 ~I~~~~~~ 507 (507)
T 1coy_A 500 KIISSDIQ 507 (507)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhcC
Confidence 99988763
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=7e-47 Score=407.96 Aligned_cols=445 Identities=14% Similarity=0.119 Sum_probs=276.2
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCCCcccc----------hhhhhhhc----CC--C-----
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNS----------GSFSAELA----DL--S----- 100 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~~~----------~~~~~~~~----~~--~----- 100 (538)
|...|||||||+|++|+++|..|++ |++|+|||+++........... ..+..... .. .
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 4467999999999999999999999 9999999999865421110000 00110000 00 0
Q ss_pred -------CCCCCccccCC------Cceee----cCcccccchhhhcccccccCChhh--hhcCCCC---hhhhhhhhhhh
Q 009272 101 -------PTSPSQRFISE------DGVVS----TRARVLGGGTCINAGFYTRAEPYY--AREAGWD---GRLVNESYQWV 158 (538)
Q Consensus 101 -------~~~~~~~~~~~------~~~~~----~~g~~lGG~s~~n~~~~~r~~~~~--~~~~gw~---~~~l~~~~~~~ 158 (538)
........... ..+.. ..+..+||.+.+|.+...|..+.. .....|. .+++.++|+..
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 00000000000 01111 256678999999999887776521 0112232 35667777776
Q ss_pred ccccccCCCC--chhH-HHHHHHHHHcCCCCCCCCccCCCCceeeeeeeeCCCCccccH-HHHHh-h------cCCCCeE
Q 009272 159 EKKVVFRPPM--QRWQ-SALRDGLVEVGVLPYNGFTYDHLYGTKIGGTIIDQNSQRHTA-ADLLE-Y------ANPSGLT 227 (538)
Q Consensus 159 e~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~-~~~l~-~------~~~~~~~ 227 (538)
+..+...... .... ......+........ . +. ..+...........|++. ..++. . .++.|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~-~--~~---~~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQR-D--FQ---QIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTTS-C--CE---ECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhcc-c--cc---ccchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 6654332211 1111 111111222111000 0 00 000111111122234443 33554 2 3456999
Q ss_pred EEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCChhhhhhCCCcee
Q 009272 228 VLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGPADHLKAHNITVV 306 (538)
Q Consensus 228 i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~~~~l~~~gi~~~ 306 (538)
|++++.|++|+.++++ .+++||++.+ .+|+.+++ .++.||||+|++.+|++|+.||||+..+++.+||++
T Consensus 277 v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i-----~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~- 347 (623)
T 3pl8_A 277 LFPAVACERVVRNALN---SEIESLHIHDLISGDRFEI-----KADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE- 347 (623)
T ss_dssp EECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEE-----CEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS-
T ss_pred EEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEE-----ECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC-
Confidence 9999999999997542 2899999987 46766665 578999999999999999999999999999999998
Q ss_pred ecCcccCccCccCCCceEEeeCCCCccchhhHh---hcccccccc-------------------------c---------
Q 009272 307 LDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQV---VGITQFGSY-------------------------I--------- 349 (538)
Q Consensus 307 ~~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------------------------~--------- 349 (538)
++|.||+||+||+...+.+...++....+... .++..-+.| .
T Consensus 348 -~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~ 426 (623)
T 3pl8_A 348 -LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPI 426 (623)
T ss_dssp -SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTTCCCSS
T ss_pred -CCcccccchhhCcCceEEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhccccccccc
Confidence 99999999999998887766543311000000 000000000 0
Q ss_pred -----------cccCCCCC---------CCC-CCC--CCCccceeeEeeecCcCcceEEEecC--CCCCCCCeeecCCCC
Q 009272 350 -----------EGASGVNF---------AGG-SPS--PRPYRGGFIFEKIIGPVSTGHLELRT--RNPNDTPSVTFNYFK 404 (538)
Q Consensus 350 -----------~~~~g~~~---------~~~-~~~--~~~~~~~~~~~~~~~p~s~g~v~l~~--~d~~~~p~i~~~~~~ 404 (538)
....+..| ... +.. ...............|.++|+|+|++ +|+++.|+++++|..
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~ 506 (623)
T 3pl8_A 427 PFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRF 506 (623)
T ss_dssp CTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEECCC
T ss_pred ccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEEeC
Confidence 00000000 000 000 00000111112234588899999976 899999999999999
Q ss_pred CHH-HHHHHHHHHHHHHHHHcCccccccccccchhHHhhhhccCCCCCCCCCCCCCHHHHHHHHHhccCCcccccccccC
Q 009272 405 EPE-DLQRCVQGISTIEKIIESKSFSKFKYDNMSVETLLNMTASMPLNLLPKHSNTSTSLEQFCRDTVMTIWHYHGGCQV 483 (538)
Q Consensus 405 ~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~m 483 (538)
++. |++.+.++++.+.++++..+......... . ...++++|++|||+|
T Consensus 507 ~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------------~----------------~~~~~~~H~~gt~~m 555 (623)
T 3pl8_A 507 PAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLPQ---------------F----------------MEPGLVLHLGGTHRM 555 (623)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTEEECTTSCSE---------------E----------------CCTTTTCCCBCTTCB
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCcccCchhh---------------c----------------cCCCCcccCCCceeC
Confidence 999 99999999999999998865432211000 0 013578999999999
Q ss_pred C------Ccc-CCCCcEeccCCceEEecccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 009272 484 G------KVV-DHDYKVLGVDALRVVDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 534 (538)
Q Consensus 484 G------~VV-D~~~rv~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~ 534 (538)
| +|| |+++||||++||||+|+||||+.+++||++||||||+|+|++|+++.
T Consensus 556 g~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 556 GFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp CSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 9 476 99999999999999999999999999999999999999999998763
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.55 E-value=3.1e-14 Score=150.64 Aligned_cols=62 Identities=16% Similarity=0.327 Sum_probs=47.5
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCC-ceEEEcCCCcC-CHHHHH
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPK-NEIIVSAGALG-SPQLLM 288 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a-~~VVLaaGai~-tp~lLl 288 (538)
++..+++.|++|+++++|++|+.++++ +++||++.+ +++..++. + |.||||+|++. ++.++.
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~-----A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR-----ARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE-----EEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE-----eCCeEEEeCCChhhCHHHHH
Confidence 455556679999999999999998543 999999886 45555553 6 69999999998 455443
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.44 E-value=5.8e-13 Score=142.63 Aligned_cols=190 Identities=16% Similarity=0.189 Sum_probs=107.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCCCcccchhhhhhhcCCCCCCCCccccCCCceeecCcccc
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARVL 122 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 122 (538)
..++||||||+|++|+++|+.|++ |.+|+|||+.+. .
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~------------------------------------------~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF------------------------------------------S 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS------------------------------------------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------C
Confidence 457999999999999999999999 999999999985 4
Q ss_pred cchhhhcccccccCChhhhhcCCCChhhhhhhhhhhccccccCCCCc---h---hHHHHHHHHHHcCCCCCCCCccCCCC
Q 009272 123 GGGTCINAGFYTRAEPYYAREAGWDGRLVNESYQWVEKKVVFRPPMQ---R---WQSALRDGLVEVGVLPYNGFTYDHLY 196 (538)
Q Consensus 123 GG~s~~n~~~~~r~~~~~~~~~gw~~~~l~~~~~~~e~~~~~~~~~~---~---~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (538)
||.|...++.+........+..+.. +..+.++....+......... . ......+++.+.|+.... .....
T Consensus 157 gg~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~---~~~~~ 232 (566)
T 1qo8_A 157 GGNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDD---LKRSG 232 (566)
T ss_dssp CTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCE---EECCT
T ss_pred CCcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCcccc---ccccC
Confidence 4555555544432222222222211 112222222211110111000 0 112234556666765310 00001
Q ss_pred ceeeeeeeeCCCCcccc--H-HHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCce
Q 009272 197 GTKIGGTIIDQNSQRHT--A-ADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNE 273 (538)
Q Consensus 197 ~~~~~~~~~~~~g~r~~--~-~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~ 273 (538)
+........+.++.... . ..+...+++.|++|+++++|++|+.++++ +++||++.+.+|+..++ .++.
T Consensus 233 g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i-----~A~~ 303 (566)
T 1qo8_A 233 GARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMI-----GAKS 303 (566)
T ss_dssp TCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEE-----EEEE
T ss_pred CCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEE-----EcCE
Confidence 11111111122221111 1 12444556679999999999999988723 99999998666765555 3699
Q ss_pred EEEcCCCcCCHHHHH
Q 009272 274 IIVSAGALGSPQLLM 288 (538)
Q Consensus 274 VVLaaGai~tp~lLl 288 (538)
||||+|++...+-|+
T Consensus 304 VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 304 VVLATGGYGMNKEMI 318 (566)
T ss_dssp EEECCCCCTTCHHHH
T ss_pred EEEecCCcccCHHHH
Confidence 999999988754443
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.44 E-value=9.9e-13 Score=141.01 Aligned_cols=186 Identities=16% Similarity=0.174 Sum_probs=103.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCCCcccchhhhhhhcCCCCCCCCccccCCCceeecCccccc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPNITNSGSFSAELADLSPTSPSQRFISEDGVVSTRARVLG 123 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lG 123 (538)
+++||||||+|++|+++|+.|++ |.+|+|||+.+. +|
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~------------------------------------------~g 162 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPV------------------------------------------IG 162 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS------------------------------------------SC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------CC
Confidence 36999999999999999999999 999999999985 44
Q ss_pred chhhhcccccccCChhhhhcCCCChhhhhhhhhhhccccccCCCCc---hh---HHHHHHHHHHcCCCCCCCCccCCCCc
Q 009272 124 GGTCINAGFYTRAEPYYAREAGWDGRLVNESYQWVEKKVVFRPPMQ---RW---QSALRDGLVEVGVLPYNGFTYDHLYG 197 (538)
Q Consensus 124 G~s~~n~~~~~r~~~~~~~~~gw~~~~l~~~~~~~e~~~~~~~~~~---~~---~~~~~~~~~~~g~~~~~~~~~~~~~~ 197 (538)
|.+...++.+........+..+.. +..+.++....+.-....... .+ .....+.+.+.|+.... .....+
T Consensus 163 g~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~~~~~g 238 (571)
T 1y0p_A 163 GNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTD---VGMMGG 238 (571)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCE---EECCTT
T ss_pred CchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCCcc---CcccCC
Confidence 555544443322222222222211 111222221111000000000 00 12234556666764310 000111
Q ss_pred eeeeeeeeCCCCccccH---HHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceE
Q 009272 198 TKIGGTIIDQNSQRHTA---ADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEI 274 (538)
Q Consensus 198 ~~~~~~~~~~~g~r~~~---~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~V 274 (538)
........+.+|..... ..+...+++.|++|+++++|++|+.++++ +++||.+.+.+|+..++ .++.|
T Consensus 239 ~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i-----~a~~V 309 (571)
T 1y0p_A 239 ASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWV-----KADAV 309 (571)
T ss_dssp CSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEE-----ECSEE
T ss_pred cCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEE-----ECCeE
Confidence 11111122222211111 12444556679999999999999987733 89999998656765555 37899
Q ss_pred EEcCCCcCCHH
Q 009272 275 IVSAGALGSPQ 285 (538)
Q Consensus 275 VLaaGai~tp~ 285 (538)
|||+|++...+
T Consensus 310 VlAtGg~~~n~ 320 (571)
T 1y0p_A 310 ILATGGFAKNN 320 (571)
T ss_dssp EECCCCCTTCH
T ss_pred EEeCCCcccCH
Confidence 99999987643
No 15
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.38 E-value=1.2e-12 Score=138.32 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=44.9
Q ss_pred CCCCccccHHHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHH
Q 009272 206 DQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 285 (538)
Q Consensus 206 ~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~ 285 (538)
+..|...-...+...+++.|.+|+++++|++|+.+++ +++||++. +|+.. .++.||++++...+.+
T Consensus 216 p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~~-------~ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 216 PRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRRF-------LTQAVASNADVVHTYR 281 (501)
T ss_dssp ETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCEE-------ECSCEEECCC------
T ss_pred eCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcEE-------EcCEEEECCCHHHHHH
Confidence 3444333333355556678999999999999999987 99999886 56542 3799999999988877
Q ss_pred HHHH
Q 009272 286 LLML 289 (538)
Q Consensus 286 lLl~ 289 (538)
.|+-
T Consensus 282 ~Ll~ 285 (501)
T 4dgk_A 282 DLLS 285 (501)
T ss_dssp ----
T ss_pred Hhcc
Confidence 6654
No 16
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.33 E-value=1.2e-11 Score=132.47 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=46.9
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCC-HHHH
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGS-PQLL 287 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~t-p~lL 287 (538)
+...+++.|++|+++++|++|+.++++ +++||++.+.+|+..++ .++.||||+|++.. +.++
T Consensus 261 L~~~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i-----~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 261 LWDNAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVI-----KADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEE-----ECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEE-----EcCEEEEeCCCCccCHHHH
Confidence 444556679999999999999987723 89999998656765555 37999999999875 4444
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.28 E-value=2.2e-11 Score=131.68 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=45.3
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
++..+.+.|++|+.++.|++|+.+++ ++.||.+.+ .+|+.+.+ .++.||||+|++..
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i-----~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAY-----VAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----ECSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEE-----EcCEEEEccCcchh
Confidence 44445567999999999999998765 999998876 46765555 47999999999864
No 18
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.26 E-value=3.7e-11 Score=128.97 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=46.4
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
++..+.+.|++|+.++.|++|+.+++ ++.||.+.+ .+|+.+.+ .++.||||+|++..
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i-----~A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRF-----RAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----EEEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEE-----EcCeEEECCCcccc
Confidence 44556778999999999999998765 999999876 46765555 47899999999864
No 19
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.25 E-value=8.1e-12 Score=126.05 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=46.2
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHc-CCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLS-GVG 293 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~S-Gig 293 (538)
+...+++.|++|+++++|++|..+++ .+..|.+ .+|+..++ .++.||+|+|+ ++..|+... |+.
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~-----~a~~VV~A~G~-~s~~l~~~~~g~~ 220 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTL-----SCRVLINAAGL-HAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEE-----EEEEEEECCGG-GHHHHHHTEETSC
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEE-----EeCEEEECCCc-chHHHHHHhcCCC
Confidence 44556677999999999999998776 3233544 35654444 47999999998 477877776 663
No 20
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.23 E-value=2.6e-11 Score=129.36 Aligned_cols=66 Identities=21% Similarity=0.250 Sum_probs=51.6
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +|+...+ .++.||+|+|. ++..++...|+.
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i-----~A~~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTI-----YAKKVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----EEEEEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEE-----ECCEEEECCCc-chHHHHHhcCCC
Confidence 44456667999999999999999876 8999999863 4554555 47999999998 577887776654
No 21
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.23 E-value=5.3e-11 Score=127.51 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=44.9
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
+...+.+.|++|++++.|++|+.++++ +++||.+.+ .+|+...+ .++.||||+|++..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i-----~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYF-----KARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEE-----EEEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEE-----EcCEEEECCCCCcc
Confidence 444555679999999999999987333 899999876 45665555 47899999999764
No 22
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.20 E-value=6.3e-11 Score=125.68 Aligned_cols=35 Identities=34% Similarity=0.609 Sum_probs=32.8
Q ss_pred CCccEEEECCCCchHHHhhhhcCCCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQNASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~ 79 (538)
.++||||||||++|+++|+.|++|.+|+||||++.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCC
Confidence 46999999999999999999999889999999975
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.18 E-value=1.6e-10 Score=120.03 Aligned_cols=55 Identities=22% Similarity=0.427 Sum_probs=42.5
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHH
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ 285 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~ 285 (538)
+...+++.|++|+++++|++|..+++ ++.+|.+. +|+ ++ .++.||+|+|+...|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i-----~Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VL-----ETNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EE-----ECSCEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EE-----ECCEEEECCCCCcCCC
Confidence 44455667999999999999998765 77888764 454 23 3799999999987664
No 24
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.18 E-value=1.1e-11 Score=125.77 Aligned_cols=36 Identities=39% Similarity=0.527 Sum_probs=33.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcCCCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQNASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~ 79 (538)
.+.+||||||+|++|+++|++|++|.+|+|||+++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCC
Confidence 346899999999999999999999999999999964
No 25
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.16 E-value=3.8e-10 Score=121.10 Aligned_cols=58 Identities=16% Similarity=0.171 Sum_probs=44.9
Q ss_pred HHhhcCCCC-eEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCH
Q 009272 217 LLEYANPSG-LTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSP 284 (538)
Q Consensus 217 ~l~~~~~~~-~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp 284 (538)
++..+.+.+ ++|++++.|++|+.+++ +++||.+.+ .+|+...+ .++.||+|+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i-----~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQI-----RANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEE-----ECSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEE-----EcCeEEECCCCCccc
Confidence 444455555 99999999999998866 899998875 46665455 478999999997654
No 26
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.15 E-value=4.8e-11 Score=121.22 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=33.2
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
|..++||||||+|++|+++|++|++ |.+|+|||++.
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3457999999999999999999999 99999999985
No 27
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.14 E-value=3.7e-10 Score=120.66 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=49.7
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
++..+.+.|++|+++++|++|..+++ ++++|++.+. +|+...+ .++.||+|+|++ +..++...|+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i-----~A~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEI-----KAKLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----EBSCEEECCGGG-HHHHHTTCCS
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEE-----EcCEEEECCChh-HHHHHHhhcc
Confidence 34455678999999999999999876 8999998864 3544444 479999999984 7777665544
No 28
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=6.6e-11 Score=121.29 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=32.0
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+.+.|||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3457999999999999999999999 999999999985
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.09 E-value=2.8e-10 Score=117.86 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=34.5
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 80 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (538)
+.+.|||||||+|++|+++|++|++ |. +|+|||++...
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3557999999999999999999999 99 99999999753
No 30
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.06 E-value=1.7e-10 Score=124.52 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=44.7
Q ss_pred HHhhcCCC--CeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPS--GLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~--~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
+...+++. |++|+.++.|++|+.++++ ..++.||.+.+ .+|+.+.+ .++.||||+|+++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i-----~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIF-----KANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEE-----ECSEEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEE-----EeCEEEECCCcccc
Confidence 33444444 9999999999999987651 12899998876 35665555 47999999999874
No 31
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.05 E-value=3.4e-10 Score=115.58 Aligned_cols=36 Identities=36% Similarity=0.590 Sum_probs=32.9
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.+||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 2 ~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 2 TESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 346999999999999999999999 999999999875
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.03 E-value=5e-10 Score=114.54 Aligned_cols=36 Identities=36% Similarity=0.542 Sum_probs=33.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC--C-CeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ--N-ASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g-~~VlvlE~G~~ 79 (538)
..++||||||+|++|+++|++|++ | .+|+|||++..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 457999999999999999999998 8 89999999973
No 33
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.02 E-value=1.3e-09 Score=118.11 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=43.7
Q ss_pred HhhcCCC-Ce-EEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 218 LEYANPS-GL-TVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 218 l~~~~~~-~~-~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
...+++. |+ +|+.++.|++|+.++++ .++++||.+.+ .+|+...+ .++.||||+|++..
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i-----~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVF-----KAKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEE-----ECSEEEECCCCBCS
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEE-----EcCEEEECCCcccc
Confidence 3344444 89 99999999999987541 12899998865 45665555 47999999999875
No 34
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.01 E-value=1.7e-10 Score=117.02 Aligned_cols=37 Identities=35% Similarity=0.569 Sum_probs=33.8
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
....|||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3457999999999999999999999 999999999864
No 35
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.01 E-value=5.2e-10 Score=125.16 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=45.0
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
+...+++.|++|+.+++|++|..+++ ++++|.+. +| ++ .++.||+|+|++ ++.++...|+
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i-----~Ad~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VI-----PADIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EE-----ECSEEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EE-----ECCEEEECCccc-hHHHHHHhCC
Confidence 44456667999999999999998766 77777653 44 23 479999999984 5777666654
No 36
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.00 E-value=8.9e-10 Score=112.44 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=33.0
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++|||||||+|++|+++|+.|++ |.+|+|||+++.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999975
No 37
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.00 E-value=1e-09 Score=114.62 Aligned_cols=52 Identities=17% Similarity=0.331 Sum_probs=39.5
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALG 282 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~ 282 (538)
+...+++.|++++.+++| +|..+++ ++.||.+.+.+|+ + .++.||+|+|+..
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g~---~-----~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGLV---E-----DVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEEE---C-----CCSEEEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCCe---E-----EeeeEEECCCCCc
Confidence 444455679999999999 9988766 8999987542332 2 4799999999864
No 38
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.00 E-value=3.6e-09 Score=111.41 Aligned_cols=60 Identities=15% Similarity=0.025 Sum_probs=44.6
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHHH
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 288 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl 288 (538)
+...+.+.|++++++++|++|..++ ++.+|.+.+ .+|+...+ .++.||+|+|++ +..++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i-----~A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSW-----QARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEE-----EESCEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEE-----ECCEEEECCChh-HHHHHH
Confidence 4445566799999999999999864 467888875 35654454 479999999984 666654
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.99 E-value=2.4e-09 Score=117.07 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=32.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+++|++|++ |.+|+|||+...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45999999999999999999999 999999999764
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=2.3e-09 Score=117.39 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=32.8
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 46999999999999999999999 999999999864
No 41
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.91 E-value=1.8e-09 Score=113.79 Aligned_cols=36 Identities=31% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||||||+|++|+++|+.|++ |.+|+|||+++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 346899999999999999999999 999999999975
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.90 E-value=2.7e-09 Score=108.38 Aligned_cols=34 Identities=29% Similarity=0.528 Sum_probs=32.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999874
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.90 E-value=7.5e-10 Score=111.87 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=32.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 5899999999999999999999 999999999875
No 44
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.87 E-value=4.7e-09 Score=106.64 Aligned_cols=35 Identities=29% Similarity=0.572 Sum_probs=32.9
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 36999999999999999999999 999999999875
No 45
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.87 E-value=1.8e-09 Score=112.09 Aligned_cols=33 Identities=36% Similarity=0.687 Sum_probs=31.2
Q ss_pred CCccEEEECCCCchHHHhhhhcC-C-CeEEEEecc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERG 77 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G 77 (538)
+++||||||+|++|+++|++|++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 57999999999999999999999 9 999999993
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.86 E-value=9e-09 Score=104.81 Aligned_cols=34 Identities=29% Similarity=0.587 Sum_probs=32.5
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5999999999999999999999 999999999974
No 47
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.85 E-value=1.5e-08 Score=98.28 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=32.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (538)
.+|||||||+|++|+.+|+.|++ |.+|+|||+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 46899999999999999999998 799999999875
No 48
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.85 E-value=5.2e-09 Score=107.71 Aligned_cols=57 Identities=25% Similarity=0.288 Sum_probs=44.2
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHH
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 288 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl 288 (538)
+...+++.|++|+++++|++|..+++ +++||.+ +|+ ++ .++.||+|++...+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IH-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EE-----ECCEEEECCCHHHHHHhcC
Confidence 44455667999999999999999876 8888865 343 23 4799999999987777553
No 49
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.81 E-value=1.6e-08 Score=105.10 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=43.7
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
+...+.+.|++|+.+++|++|..+++ +++||.+.+. +|+..++ .++.||.|.|....
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~-----~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTV-----YSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEE-----ECSEEEECCGGGCT
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEE-----EcCEEEECcCCchh
Confidence 34445557999999999999998776 8899988764 5654454 47999999998543
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.77 E-value=1e-08 Score=108.33 Aligned_cols=57 Identities=26% Similarity=0.367 Sum_probs=45.2
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~t 283 (538)
+...+.+.|++|+.+++|++|..+++ ++.+|.+.+.+|+..++ .++.||.|+|....
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i-----~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMA-----HARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEE-----EEEEEEECCCTTCS
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEE-----EcCEEEECCCcchH
Confidence 33445567999999999999998776 89999998777765555 47999999998543
No 51
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.74 E-value=5.5e-08 Score=95.74 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=32.5
Q ss_pred CCccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
.+|||||||+|++|+++|+.|++ |.+|+|||+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 46999999999999999999998 799999999975
No 52
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.74 E-value=1.8e-08 Score=103.68 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=32.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
.||||||+|++|+++|++|++ |.+|+|||+.+....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 389999999999999999999 999999999987543
No 53
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.70 E-value=2e-08 Score=103.66 Aligned_cols=41 Identities=32% Similarity=0.519 Sum_probs=37.0
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGN 83 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (538)
|.+.|||||||+|.+|+++|.+|++ |++|+|||+++.....
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGE 58 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 4568999999999999999999999 9999999999876543
No 54
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.64 E-value=6.1e-08 Score=96.66 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHhhhhcC----CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (538)
+||+|||+|++|+++|+.|++ |.+|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 599999999999999999987 689999999864
No 55
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.62 E-value=7.3e-08 Score=102.16 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=32.1
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46999999999999999999999 99999999984
No 56
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.61 E-value=9.7e-08 Score=98.02 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+|||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35999999999999999999999 999999999964
No 57
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.60 E-value=4.1e-08 Score=97.46 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=32.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999 999999999874
No 58
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.58 E-value=3e-07 Score=90.01 Aligned_cols=36 Identities=28% Similarity=0.513 Sum_probs=31.7
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+++|||||||||++|+++|++|++ |++|+|+|++.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3567999999999999999999999 99999999875
No 59
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.58 E-value=2e-07 Score=91.14 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=32.1
Q ss_pred CCccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
.+|||+|||+|++|+++|+.|++ |.+|+|+|+.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 46799999999999999999997 689999999875
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.57 E-value=8.8e-08 Score=101.89 Aligned_cols=34 Identities=35% Similarity=0.561 Sum_probs=32.2
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 47999999999999999999999 99999999984
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.56 E-value=7.9e-08 Score=102.74 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=33.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.+||||||||++|+++|+.|++ |.+|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 457999999999999999999999 999999999864
No 62
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.56 E-value=2.5e-07 Score=86.79 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=32.0
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 36999999999999999999999 99999999984
No 63
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.54 E-value=8.7e-08 Score=97.99 Aligned_cols=35 Identities=40% Similarity=0.602 Sum_probs=31.9
Q ss_pred CCccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+++|+.|++ |.+|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 45999999999999999999987 799999999864
No 64
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.51 E-value=1.9e-07 Score=93.26 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=32.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.|||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5899999999999999999999 999999999975
No 65
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.49 E-value=1.7e-07 Score=99.58 Aligned_cols=35 Identities=34% Similarity=0.619 Sum_probs=32.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
...|||||||+|.+|+.+|..|++ |.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 447999999999999999999999 99999999985
No 66
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.48 E-value=2.3e-07 Score=99.33 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=42.8
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe----CCCCe-------EEEEeccCCCceEEEcCCCcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD----ATDAE-------HIAYLRNGPKNEIIVSAGALGS 283 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~----~~g~~-------~~~~~~~~~a~~VVLaaGai~t 283 (538)
+...+++.|++|+.++.|++|..++++ +++||.+.+ .+|+. .++ .++.||+|.|+...
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i-----~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLEL-----HAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEE-----ECSEEEECCCTTCH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEE-----ECCEEEEeeCCCch
Confidence 344555569999999999999988754 788888763 34532 233 47999999999665
No 67
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.47 E-value=4.3e-07 Score=96.34 Aligned_cols=36 Identities=31% Similarity=0.441 Sum_probs=33.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 47999999999999999999999 9999999999753
No 68
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.47 E-value=5.6e-07 Score=88.58 Aligned_cols=64 Identities=22% Similarity=0.379 Sum_probs=47.2
Q ss_pred hhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 219 EYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 219 ~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
..+.+.|++++++++|++|..+++ ++.+|.+.+ .+|+..++ .++.||+|+|...++.+|..+|+
T Consensus 198 ~~l~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 198 QEIKKRNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHHHHTTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSCC
T ss_pred HHHhcCCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhccc
Confidence 333467999999999999987654 688888875 25654444 58999999998777666655544
No 69
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.43 E-value=8e-07 Score=93.29 Aligned_cols=39 Identities=36% Similarity=0.383 Sum_probs=34.8
Q ss_pred CCCCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 41 AKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++++++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 445778999999999999999999999 999999999875
No 70
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.43 E-value=7e-07 Score=91.19 Aligned_cols=37 Identities=27% Similarity=0.263 Sum_probs=32.7
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+.|||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 3557999999999999999999999 999999999975
No 71
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.42 E-value=1.9e-07 Score=97.95 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.6
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||+|||+|++|+.+|..|++ |.+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 457999999999999999999999 999999999875
No 72
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.41 E-value=8.2e-07 Score=87.23 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
..+||+|||+|++|+++|++|++ |.+|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 46999999999999999999999 9999999997
No 73
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.40 E-value=1.2e-06 Score=92.03 Aligned_cols=39 Identities=33% Similarity=0.388 Sum_probs=33.3
Q ss_pred CCCCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 41 AKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+.++||||||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 7 ~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 7 HHHRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred cccCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 344568999999999999999999999 999999999865
No 74
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.38 E-value=2.8e-06 Score=89.78 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=47.5
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHH-HHHHcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ-LLMLSGV 292 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~-lLl~SGi 292 (538)
+....++.|++++++++|++|..++++ ++.++.+...+|+ .++ .++.||+|+|...+.. +|...|+
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcCC
Confidence 334556679999999999999876553 6666655544563 233 4799999999887776 6777666
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.36 E-value=5.9e-07 Score=95.28 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.9
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||||||+|++|+.+|.+|++ |.+|+|||+++.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 456999999999999999999999 999999999875
No 76
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.36 E-value=3.5e-07 Score=97.44 Aligned_cols=36 Identities=36% Similarity=0.540 Sum_probs=31.3
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.+|||||||+|++|+++|+.|++ |.+|+|||+.+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 46999999999999999999999 9999999998753
No 77
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.33 E-value=8e-07 Score=93.19 Aligned_cols=36 Identities=33% Similarity=0.520 Sum_probs=31.5
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+|||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 346999999999999999999999 999999998764
No 78
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.33 E-value=1.3e-06 Score=90.39 Aligned_cols=37 Identities=35% Similarity=0.485 Sum_probs=33.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CC--eEEEEeccCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDSP 80 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~ 80 (538)
...+||+|||+|++|+++|..|++ |. +|+|+|+.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 346899999999999999999999 98 99999998653
No 79
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.33 E-value=5.5e-07 Score=94.04 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=32.9
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++|||||||+|++|+++|++|++ |++|+|||+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 46999999999999999999999 999999999874
No 80
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.31 E-value=7.2e-07 Score=94.38 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.5
Q ss_pred CCccEEEECCCCchHHHhhhhc-C-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLS-Q-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La-~-g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+.+|.+|+ + |.+|+|||+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 3699999999999999999999 8 999999999875
No 81
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.31 E-value=1.6e-06 Score=86.88 Aligned_cols=37 Identities=27% Similarity=0.306 Sum_probs=32.9
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
|.+.+||+|||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 48 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ 48 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3457999999999999999999999 999999999864
No 82
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.31 E-value=2.2e-07 Score=88.62 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=32.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++||+|||+|++|+++|+.|++ |.+|+|+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4899999999999999999999 999999999875
No 83
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.31 E-value=1.1e-06 Score=88.37 Aligned_cols=33 Identities=33% Similarity=0.594 Sum_probs=31.5
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
.|||+|||+|++|+.+|.+|++ |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5899999999999999999999 98 999999986
No 84
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.30 E-value=1.8e-06 Score=87.86 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=32.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++||||||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 35999999999999999999999 999999999864
No 85
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.30 E-value=1.4e-06 Score=92.53 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=33.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||||||+|++|+.+|.+|++ |.+|+|+|+++.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999975
No 86
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.30 E-value=3.2e-07 Score=90.05 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=32.0
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+|||||||+|+||+++|.+|++ |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 37999999999999999999999 99999999874
No 87
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.29 E-value=1.4e-06 Score=86.35 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.+||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999874
No 88
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.29 E-value=1.5e-06 Score=91.95 Aligned_cols=36 Identities=33% Similarity=0.446 Sum_probs=33.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||||||+|++|+.+|.+|++ |.+|+|||+++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999975
No 89
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.28 E-value=1.5e-06 Score=88.95 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=49.0
Q ss_pred HhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 218 LEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 218 l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
....++.|+++++++.|++|..+++ ++.+|++. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 201 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 201 QAEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--I-----PADIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--E-----ECSEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCccChHHHHhCCCC
Confidence 3355668999999999999988665 78888775 5643 2 479999999998888888887764
No 90
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.27 E-value=8.8e-07 Score=87.67 Aligned_cols=56 Identities=9% Similarity=0.196 Sum_probs=42.9
Q ss_pred CCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 222 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 222 ~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
++.|+++++++.|++|..+++ ++.+|.+.+. +|+..++ .++.||+|+|...++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDL-----PVSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEE-----ECSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEE-----EeCEEEEEeCCCCChhHh
Confidence 345999999999999998766 7888998863 3444444 479999999987665544
No 91
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.27 E-value=2.1e-06 Score=87.24 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=32.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5899999999999999999999 999999999863
No 92
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.25 E-value=4.9e-06 Score=84.62 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=32.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+||+|||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999 999999999864
No 93
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.24 E-value=9.4e-06 Score=79.31 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=45.5
Q ss_pred hcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHH
Q 009272 220 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLM 288 (538)
Q Consensus 220 ~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl 288 (538)
..++.|+++++++.|++|..+++ ++.+|.+...+|+..++ .++.||+|+|...++.++.
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGGB
T ss_pred HHhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhhh
Confidence 33578999999999999988766 88889887556765554 5799999999766555443
No 94
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.24 E-value=3.3e-07 Score=89.94 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=32.9
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
|.+.|||||||+|+||+++|.+|++ |++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4567999999999999999999999 99999999975
No 95
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.19 E-value=4.6e-06 Score=82.19 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=32.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 5899999999999999999999 999999999975
No 96
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.18 E-value=7.3e-06 Score=85.11 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHhhhhcC----CCe---EEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ----NAS---VLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~----g~~---VlvlE~G~~ 79 (538)
+||+|||+|++|+++|..|++ |.+ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCC
Confidence 699999999999999999986 788 999999875
No 97
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.18 E-value=6.4e-06 Score=85.57 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=32.9
Q ss_pred CCccEEEECCCCchHHHhhhhcC-C-----CeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-N-----ASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-----~~VlvlE~G~~ 79 (538)
+.|||||||+|++|+++|..|++ | .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCC
Confidence 56899999999999999999999 8 99999999985
No 98
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.13 E-value=1.1e-06 Score=91.11 Aligned_cols=41 Identities=34% Similarity=0.496 Sum_probs=37.0
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGN 83 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~ 83 (538)
|.++|||||||+|.+|+++|.+|++ |++|+|||+.+.....
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 4567999999999999999999999 9999999999886543
No 99
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.12 E-value=1.1e-05 Score=88.56 Aligned_cols=38 Identities=32% Similarity=0.352 Sum_probs=34.3
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
.+.+||||||+|++|+++|..|++ |.+|+|+|+.+...
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 346999999999999999999999 99999999987654
No 100
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.12 E-value=1.3e-05 Score=85.10 Aligned_cols=35 Identities=31% Similarity=0.570 Sum_probs=32.8
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999875
No 101
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.12 E-value=7.5e-06 Score=83.47 Aligned_cols=62 Identities=15% Similarity=0.275 Sum_probs=48.9
Q ss_pred HhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 218 LEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 218 l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
....++.|+++++++.|++|..+++ ++.+|.+. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--L-----PCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--E-----EcCEEEECcCCccCHHHHHhCCCC
Confidence 3355678999999999999988766 78888775 5653 2 479999999998888888887774
No 102
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.10 E-value=1.2e-05 Score=78.64 Aligned_cols=31 Identities=32% Similarity=0.622 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (538)
|||+|||+|++|+++|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 899999999999999999999 99 99999996
No 103
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.09 E-value=1.1e-06 Score=92.75 Aligned_cols=34 Identities=41% Similarity=0.674 Sum_probs=32.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+||+||||+|++|.++|.++++ |+||+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5999999999999999999999 999999998764
No 104
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.08 E-value=1.3e-06 Score=86.43 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=32.6
Q ss_pred CCCccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
..++||+|||||++|+++|++|++ |++|+|+|+++.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 347899999999999999999974 899999999975
No 105
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.02 E-value=1.5e-06 Score=91.43 Aligned_cols=38 Identities=32% Similarity=0.528 Sum_probs=34.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYG 82 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~ 82 (538)
..+||||||||++|+++|++|++ |.+|+|||+.+....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 36999999999999999999987 899999999988654
No 106
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.96 E-value=1.7e-05 Score=85.74 Aligned_cols=36 Identities=31% Similarity=0.504 Sum_probs=33.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (538)
..++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 357999999999999999999998 899999999875
No 107
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.95 E-value=3.6e-06 Score=84.40 Aligned_cols=37 Identities=30% Similarity=0.308 Sum_probs=34.2
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
|...+||||||+|++|+++|++|++ |.+|+|||+...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4567999999999999999999999 999999999864
No 108
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.94 E-value=2.5e-06 Score=87.65 Aligned_cols=34 Identities=47% Similarity=0.747 Sum_probs=32.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
|||||||+|++|+++|++|++ |.+|+|||+.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 899999999999999999999 9999999997754
No 109
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.92 E-value=3.7e-06 Score=88.71 Aligned_cols=38 Identities=32% Similarity=0.480 Sum_probs=34.3
Q ss_pred CCCCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 41 AKPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 41 ~~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.++..+|||||||+|++|+++|.+|++ |.+|+|||+.+
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 344568999999999999999999999 99999999975
No 110
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.91 E-value=3.6e-06 Score=88.01 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=31.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+|||||||+|++|+++|++|++ |.+|+|||++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999943
No 111
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.91 E-value=4e-06 Score=87.13 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=31.2
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.+|||||||+|++|+++|++|++ |.+|+|||++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999 9999999994
No 112
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.89 E-value=3e-06 Score=88.13 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=32.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+|||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 346999999999999999999999 999999997654
No 113
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.89 E-value=3.5e-06 Score=88.23 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=31.5
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+|||||||+|++|+++|.+|++ |.+|+|||+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 114
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.85 E-value=7.7e-06 Score=83.20 Aligned_cols=40 Identities=30% Similarity=0.481 Sum_probs=35.6
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC--CCeEEEEeccCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDSPYG 82 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~~~~ 82 (538)
|.+++||||||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4557999999999999999999998 799999999987543
No 115
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.82 E-value=3.7e-05 Score=81.05 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.3
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
....|||+|||+|++|+++|.+|++ |.+|+|+|+
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 3457999999999999999999999 999999986
No 116
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.82 E-value=6.3e-06 Score=85.60 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=32.6
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.++|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 457999999999999999999999 99999999984
No 117
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.82 E-value=6.3e-06 Score=85.29 Aligned_cols=35 Identities=31% Similarity=0.571 Sum_probs=32.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 356999999999999999999999 99999999984
No 118
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.82 E-value=7.6e-06 Score=85.11 Aligned_cols=36 Identities=33% Similarity=0.367 Sum_probs=33.0
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
|...|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3457999999999999999999999 99999999984
No 119
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.81 E-value=4.9e-06 Score=86.84 Aligned_cols=35 Identities=37% Similarity=0.657 Sum_probs=32.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
...|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 447999999999999999999999 99999999874
No 120
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.81 E-value=9.2e-06 Score=81.63 Aligned_cols=36 Identities=36% Similarity=0.632 Sum_probs=33.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
.|||+|||+|++|+++|++|++ |.+|+|+|+++...
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 3799999999999999999999 99999999997654
No 121
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.80 E-value=9.6e-06 Score=81.93 Aligned_cols=39 Identities=31% Similarity=0.534 Sum_probs=35.1
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
+...+||+|||+|++|+++|++|++ |.+|+|+|+.+...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 3457999999999999999999999 99999999987654
No 122
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.78 E-value=7e-06 Score=85.91 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=32.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+|||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~ 40 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEP 40 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 357999999999999999999999 999999998643
No 123
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.77 E-value=8.6e-06 Score=81.21 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=30.3
Q ss_pred cEEEECCCCchHHHhhhhcC-C------CeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N------ASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g------~~VlvlE~G~~ 79 (538)
||||||+|++|+++|++|++ | .+|+|||++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 89999999999999999999 8 89999999863
No 124
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.76 E-value=9.4e-06 Score=85.65 Aligned_cols=39 Identities=33% Similarity=0.502 Sum_probs=34.6
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
...+||||||||++|+++|.+|++ |.+|+|+|+.+....
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 356899999999999999999999 999999999887543
No 125
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.76 E-value=1.3e-05 Score=81.55 Aligned_cols=37 Identities=32% Similarity=0.481 Sum_probs=34.1
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+...+||||||+|++|+++|..|++ |.+|+|+|+.+.
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3567999999999999999999999 999999999875
No 126
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=8.1e-06 Score=85.20 Aligned_cols=34 Identities=41% Similarity=0.696 Sum_probs=32.1
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+|||||||+|++|+.+|.+|++ |.+|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46999999999999999999999 99999999974
No 127
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.73 E-value=1.1e-05 Score=84.27 Aligned_cols=35 Identities=40% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..+|||||||+|++|+++|.+|++ |.+|+|||++.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 457999999999999999999999 99999999754
No 128
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.73 E-value=9.5e-05 Score=77.07 Aligned_cols=34 Identities=38% Similarity=0.719 Sum_probs=30.7
Q ss_pred CccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
.+||||||+|++|+.+|.+|++ |.+|+|||+.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 3699999999999999999998 689999999874
No 129
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.72 E-value=1.3e-05 Score=83.56 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=33.6
Q ss_pred CCCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 42 KPVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 42 ~~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
+....+||||||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 34567999999999999999999999 999999999987543
No 130
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.72 E-value=1.4e-05 Score=82.11 Aligned_cols=42 Identities=31% Similarity=0.438 Sum_probs=37.3
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNP 84 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~ 84 (538)
|.+++||||||+|.+|+++|.+|++ |.+|+|+|+.+......
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 4567999999999999999999999 99999999998765443
No 131
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.71 E-value=1.1e-05 Score=82.29 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=32.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCe-EEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G~~ 79 (538)
...+||||||+|++|+++|..|++ |.+ |+|||+.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 346999999999999999999999 999 999999875
No 132
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.71 E-value=1.5e-05 Score=83.37 Aligned_cols=39 Identities=33% Similarity=0.426 Sum_probs=35.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
.+.+||+|||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 457899999999999999999999 999999999987544
No 133
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.71 E-value=1.5e-05 Score=81.66 Aligned_cols=39 Identities=31% Similarity=0.359 Sum_probs=35.1
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPYG 82 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~~ 82 (538)
.+.+||||||+|++|+++|++|++ | .+|+|+|+.+....
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 356899999999999999999999 9 89999999887643
No 134
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.69 E-value=1.6e-05 Score=83.26 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=40.8
Q ss_pred HHHHHh-hcCCCCeEEEeccEEEEEEecCCCCC--CCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCC
Q 009272 214 AADLLE-YANPSGLTVLLHASVHKILFRNKGKA--RPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGA 280 (538)
Q Consensus 214 ~~~~l~-~~~~~~~~i~~~~~V~~I~~~~~~~~--~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGa 280 (538)
...|+. .+++.+..|.++++|++|..+..+.. .....-|.+.+. .|+..++ .++.||+|+|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~-----~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISAR-----RTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEE-----EEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEE-----EeCEEEECcCC
Confidence 344666 56666778999999999987654211 113456666654 3444444 37999999994
No 135
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.67 E-value=9.3e-06 Score=84.74 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=32.9
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 346999999999999999999999 999999999654
No 136
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.66 E-value=1.1e-05 Score=83.67 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=33.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-C------CeEEEEeccCCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N------ASVLLLERGDSPY 81 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g------~~VlvlE~G~~~~ 81 (538)
.+||||||+|++|+++|++|++ | .+|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 5899999999999999999999 9 9999999987654
No 137
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.66 E-value=2e-05 Score=78.88 Aligned_cols=37 Identities=24% Similarity=0.403 Sum_probs=33.8
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEecc-CC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG-DS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G-~~ 79 (538)
+...+||+|||+|++|+++|++|++ |.+|+|+|+. +.
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 3457899999999999999999999 9999999999 65
No 138
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.66 E-value=1.6e-05 Score=82.71 Aligned_cols=34 Identities=29% Similarity=0.498 Sum_probs=32.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999864
No 139
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.65 E-value=1.2e-05 Score=83.94 Aligned_cols=37 Identities=30% Similarity=0.511 Sum_probs=33.4
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
|..+|||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3447999999999999999999999 999999999754
No 140
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.65 E-value=1.2e-05 Score=84.63 Aligned_cols=38 Identities=37% Similarity=0.488 Sum_probs=34.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPYG 82 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~~ 82 (538)
..+||||||+|++|+++|++|++ | .+|+|||+.+....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 35899999999999999999999 9 99999999987654
No 141
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=1.8e-05 Score=83.09 Aligned_cols=33 Identities=45% Similarity=0.738 Sum_probs=31.5
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999985
No 142
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.65 E-value=0.00014 Score=74.16 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=45.0
Q ss_pred hhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 219 EYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 219 ~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
...++.|+++++++.|++|..++ ++.+|++. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--F-----VADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--E-----EcCEEEEeeCCeecHHHHHhCCCc
Confidence 34556799999999999997643 44566664 5643 2 479999999998888888888764
No 143
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.63 E-value=2.2e-05 Score=82.35 Aligned_cols=40 Identities=28% Similarity=0.283 Sum_probs=34.6
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
|.+.+||||||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 4457999999999999999999999 999999999987654
No 144
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.62 E-value=1.9e-05 Score=82.66 Aligned_cols=38 Identities=39% Similarity=0.527 Sum_probs=34.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
+++||||||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 34999999999999999999999 999999999987543
No 145
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.61 E-value=2e-05 Score=81.70 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=31.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4899999999999999999999 999999999864
No 146
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.61 E-value=2.3e-05 Score=81.57 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=32.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEeccCCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDSPY 81 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~~ 81 (538)
+||+|||||++|+++|++|++ |. +|+|+|+.+...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 699999999999999999999 98 999999987654
No 147
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.59 E-value=2.6e-05 Score=78.69 Aligned_cols=36 Identities=33% Similarity=0.307 Sum_probs=32.8
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
+.+||||||+|++|+++|..|++ |.+|+|+|+.+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 36899999999999999999999 9999999998753
No 148
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.56 E-value=2.4e-05 Score=81.10 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46999999999999999999999 99999999943
No 149
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.55 E-value=2.3e-05 Score=81.64 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+|||||||+|++|+++|.+|++ |.+|+|||+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999864
No 150
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.54 E-value=2.6e-05 Score=80.64 Aligned_cols=38 Identities=29% Similarity=0.417 Sum_probs=34.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYG 82 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~ 82 (538)
.++||||||+|++|+++|++|++ |.+|+|+|+.+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 36899999999999999999999 999999999987543
No 151
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.52 E-value=2.7e-05 Score=76.65 Aligned_cols=34 Identities=41% Similarity=0.693 Sum_probs=32.0
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
...+||+|||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 446999999999999999999999 9999999998
No 152
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.52 E-value=2.8e-05 Score=81.40 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=31.7
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC--CCeEEEEecc
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ--NASVLLLERG 77 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G 77 (538)
|.++|||||||+|++|+++|++|++ |++|+|||+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~ 40 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQ 40 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESC
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecc
Confidence 4457999999999999999999998 8999999953
No 153
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.51 E-value=3.3e-05 Score=80.79 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=30.0
Q ss_pred CCccEEEECCCCchHHHhhhhcC--CCeEEEEec
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ--NASVLLLER 76 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~ 76 (538)
.+|||||||+|++|+++|++|++ |++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 36999999999999999999998 899999995
No 154
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.51 E-value=5.3e-05 Score=76.52 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=33.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
++||+|||+|++|+++|.+|++ |.+|+|+|+.+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4899999999999999999999 99999999987654
No 155
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.51 E-value=3.9e-05 Score=79.85 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=33.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-C--CeEEEEeccCCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSPY 81 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~~ 81 (538)
.+||||||+|++|+++|++|++ | .+|+|+|+.+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCC
Confidence 5899999999999999999999 8 9999999987643
No 156
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.50 E-value=4.2e-05 Score=79.53 Aligned_cols=36 Identities=25% Similarity=0.387 Sum_probs=33.3
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...|||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 346999999999999999999999 999999999865
No 157
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=3.3e-05 Score=80.03 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=30.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5899999999999999999999 9999999997
No 158
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.49 E-value=3.2e-05 Score=80.24 Aligned_cols=33 Identities=42% Similarity=0.628 Sum_probs=31.7
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 159
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.49 E-value=0.00021 Score=72.05 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=31.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+..-|+|||+|++|+.+|..|.. +.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 45679999999999999999977 899999999975
No 160
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.48 E-value=4e-05 Score=68.37 Aligned_cols=32 Identities=41% Similarity=0.719 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999987
No 161
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.46 E-value=4.1e-05 Score=73.99 Aligned_cols=34 Identities=35% Similarity=0.670 Sum_probs=31.7
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.|||+|||+|++|+.+|..|++ |.+|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 3899999999999999999999 999999999763
No 162
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.46 E-value=3.4e-05 Score=79.21 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=31.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+||||||+|++|+++|+.|++ |.+|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4899999999999999999999 99999999986
No 163
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.44 E-value=6.4e-05 Score=78.41 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=34.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~~ 81 (538)
.+.+||+|||+|++|+++|++|++ | .+|+|+|+.+...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 346999999999999999999999 8 7999999998654
No 164
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.41 E-value=4.7e-05 Score=78.99 Aligned_cols=32 Identities=31% Similarity=0.483 Sum_probs=30.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
+|||||||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999 9999999997
No 165
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.41 E-value=6.6e-05 Score=78.62 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=34.6
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
...+||+|||+|++|+++|+.|++ |.+|+|||+.+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 447899999999999999999999 99999999987654
No 166
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.36 E-value=9.5e-05 Score=73.31 Aligned_cols=34 Identities=29% Similarity=0.302 Sum_probs=32.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
+||||||+|.+|+.+|+.|++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998754
No 167
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.35 E-value=4.6e-05 Score=74.65 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
+.+||+|||+|++|+++|..|++ |.+|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 46899999999999999999999 9999999975
No 168
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.29 E-value=8.9e-05 Score=72.22 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=29.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
+|||+|||+|++|+.+|.+|++ |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999985
No 169
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.27 E-value=7e-05 Score=73.98 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=32.0
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
+...+||+|||+|++|+++|..|++ |.+|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 3457999999999999999999999 9999999975
No 170
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.26 E-value=0.0001 Score=76.59 Aligned_cols=38 Identities=34% Similarity=0.428 Sum_probs=33.1
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCCCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSPYG 82 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~~~ 82 (538)
+.+||+|||+|++|+++|++|++ |. +|+|+|+++....
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999 98 8999999986543
No 171
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.21 E-value=0.00011 Score=77.09 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=30.5
Q ss_pred CccEEEECCCCchHHHhhhhcC----CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~ 78 (538)
.|||||||+|++|+++|++|++ |.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 57999999986
No 172
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.20 E-value=0.00015 Score=74.79 Aligned_cols=36 Identities=31% Similarity=0.284 Sum_probs=33.4
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+||+|||||++|+++|..|++ |++|+|+|+.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 356899999999999999999999 999999999875
No 173
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.19 E-value=0.00014 Score=77.05 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=31.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC----CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 46899999999999999999987 689999999754
No 174
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.18 E-value=0.00018 Score=78.57 Aligned_cols=39 Identities=28% Similarity=0.317 Sum_probs=34.9
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
....+||+|||+|++|+.+|+.|++ |++|+|+|+++...
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 3457999999999999999999999 99999999987543
No 175
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.17 E-value=0.00016 Score=73.33 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=30.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.|+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 59999999999999999999 999999999764
No 176
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.16 E-value=0.00018 Score=76.64 Aligned_cols=43 Identities=33% Similarity=0.308 Sum_probs=38.3
Q ss_pred CCCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCCCCCC
Q 009272 43 PVSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPYGNPN 85 (538)
Q Consensus 43 ~~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~~~~~ 85 (538)
+..+|||||||+|..|+++|..|++ |++||+||+.++...+..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 3457999999999999999999999 999999999998876543
No 177
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.14 E-value=0.00011 Score=72.28 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=30.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
..+||+|||+|++|+++|+.|++ |.+|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 35899999999999999999999 999999998
No 178
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.10 E-value=0.00021 Score=72.07 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=43.4
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
+....++.|++++++++|++|..+++ . ..|.+ .+|+. + .++.||+|+|...+..++..+|+
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~--~~g~~--i-----~~d~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGE-----G-LEAHL--SDGEV--I-----PCDLVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCC-----E-EEEEE--CCCCE--E-----ECCEEEECcCCCcCHHHHHHCCC
Confidence 34455668999999999999987654 2 23333 35643 2 36999999998777777777766
No 179
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.07 E-value=0.00018 Score=77.16 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=31.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
...|||+|||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 457999999999999999999999 9999999984
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.05 E-value=0.00024 Score=72.82 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=45.3
Q ss_pred hhcCCCCeEEEeccEEEEEEe--cCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 219 EYANPSGLTVLLHASVHKILF--RNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 219 ~~~~~~~~~i~~~~~V~~I~~--~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
...++.|+++++++.|++|.. +++ ++.+|.+. +|+. + .++.||+|+|...+..++..+|+.
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i-----~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--L-----PADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--E-----EcCEEEECCCCCcCcchhhccCCC
Confidence 345567999999999999986 334 67777664 5643 2 479999999987776777777763
No 181
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.02 E-value=0.00041 Score=75.22 Aligned_cols=38 Identities=32% Similarity=0.346 Sum_probs=34.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
...+||+|||+|++|+++|+.|++ |++|+|+|+.+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 457899999999999999999999 99999999997654
No 182
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.02 E-value=0.00031 Score=74.45 Aligned_cols=35 Identities=34% Similarity=0.526 Sum_probs=31.7
Q ss_pred CCccEEEECCCCchHHHhhhhcC----CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 47999999999999999999997 589999999764
No 183
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.02 E-value=0.00025 Score=71.39 Aligned_cols=34 Identities=32% Similarity=0.505 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (538)
.||||||+|++|+++|..|++ |.+|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 389999999999999999997 7999999998753
No 184
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.97 E-value=0.00019 Score=75.35 Aligned_cols=34 Identities=35% Similarity=0.563 Sum_probs=29.1
Q ss_pred CccEEEECCCCchHHHhhhhcC----CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~ 79 (538)
.+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 4799999999999999999987 689999999864
No 185
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.93 E-value=0.00032 Score=73.97 Aligned_cols=35 Identities=34% Similarity=0.541 Sum_probs=31.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-------------CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-------------NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-------------g~~VlvlE~G~~ 79 (538)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999986 689999999754
No 186
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.91 E-value=0.00041 Score=69.50 Aligned_cols=34 Identities=29% Similarity=0.524 Sum_probs=31.1
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.|++|||+|++|+.+|.+|++ | +|+|+|+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 4799999999999999999999 9 99999999863
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.91 E-value=0.004 Score=62.60 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=31.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 3479999999999999999999 999999999874
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.86 E-value=0.00058 Score=74.19 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=34.2
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
...+||+|||+|++|+.+|..|++ |++|+|+|+.+...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 446899999999999999999999 99999999987643
No 189
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.85 E-value=0.00068 Score=75.02 Aligned_cols=38 Identities=32% Similarity=0.346 Sum_probs=34.7
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
...+||+|||+|++|+++|++|++ |++|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 456899999999999999999999 99999999998754
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.80 E-value=0.00038 Score=72.63 Aligned_cols=34 Identities=12% Similarity=0.317 Sum_probs=32.1
Q ss_pred CccEEEECCCCchHHHhhhhcC-C---CeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N---ASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g---~~VlvlE~G~~ 79 (538)
.+||||||+|++|+.+|.+|++ | .+|+|||+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 5999999999999999999999 8 99999999875
No 191
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.79 E-value=0.0004 Score=75.28 Aligned_cols=34 Identities=29% Similarity=0.595 Sum_probs=31.6
Q ss_pred CccEEEECCCCchHHHhhhhcC------CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ------NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~------g~~VlvlE~G~~ 79 (538)
++||+|||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 6899999999999999999987 899999999864
No 192
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.78 E-value=0.00056 Score=71.41 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=44.4
Q ss_pred HhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 218 LEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 218 l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
....++.|+++++++.|++|..+++ ++ .|++ .+|+. + .++.||+|+|...+..++..+|+.
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i-----~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--V-----ETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--E-----EESEEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--E-----ECCEEEECCCCCccHHHHHHcCCc
Confidence 3355678999999999999986554 33 4444 35643 2 469999999998777777777763
No 193
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.78 E-value=0.00059 Score=74.82 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=33.9
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
...+||+|||+|++|+.+|..|++ |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 456899999999999999999999 9999999998764
No 194
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.76 E-value=0.00054 Score=70.67 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
+||||||+|++|+.+|.+|++ |.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 689999999999999999997 789999999875
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.76 E-value=0.00059 Score=69.40 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=32.3
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CC--eEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~~~ 80 (538)
..+||||||+|++|+.+|.+|++ |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999 86 59999998753
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.71 E-value=0.00073 Score=69.62 Aligned_cols=35 Identities=26% Similarity=0.423 Sum_probs=31.9
Q ss_pred CccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (538)
.+||||||+|++|+.+|.+|++ +.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 4799999999999999999998 5799999999864
No 197
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.68 E-value=0.0061 Score=60.46 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=43.4
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
.|++++++++|++|..+++ ++.+|.+...+|+...+ .++.||+|+|.-.+..+|..+|+
T Consensus 215 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTV-----EADRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp TSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEE-----ECSEEEECCCBCCSCGGGGGSSC
T ss_pred CceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEE-----eCCEEEECCCCCCCHHHHHhhcc
Confidence 4789999999999988765 78888886446654444 47999999997655555544443
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.66 E-value=0.00077 Score=69.54 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.8
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSPY 81 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~~ 81 (538)
.||||||+|++|+++|.+|++ |.+|+|+|+.+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 589999999999999999998 68999999998643
No 199
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.64 E-value=0.00078 Score=69.90 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=44.4
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
+....++.|++++++++|++|..+++ ++. |.+. +|+. + .++.||+|+|...++.++..+|+
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKRT--L-----DADLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSCE--E-----ECSEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCCE--E-----EcCEEEECCCCCcCHHHHHhCCc
Confidence 33455668999999999999987555 554 5444 5542 3 47999999999877677766666
No 200
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.61 E-value=0.00071 Score=76.45 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=44.8
Q ss_pred cCCCCeEEEeccEEEEEEec-CCCCCCCeEEEEEEEe--C---CCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcC
Q 009272 221 ANPSGLTVLLHASVHKILFR-NKGKARPVAHGVVFRD--A---TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSG 291 (538)
Q Consensus 221 ~~~~~~~i~~~~~V~~I~~~-~~~~~~~~~~gV~~~~--~---~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SG 291 (538)
+++.|++|++++.|++|..+ ++ ++.+|++.+ . +|+..++ .++.||+|+|...+..++...|
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~~-----~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADENG-----ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTTS-----CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHTT
T ss_pred HHhCCeEEEeCCEeEEEeccCCC-----CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhCC
Confidence 44579999999999999875 33 788888875 2 2433444 4799999999877777766553
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.56 E-value=0.008 Score=58.37 Aligned_cols=55 Identities=13% Similarity=0.181 Sum_probs=41.2
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-C-CCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-T-DAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~-g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
+.|++++++++|++|..+++ ++.+|.+.+. + |+..++ .++.||+|+|...++.++
T Consensus 196 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i-----~~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESL-----DVAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp TSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEE-----ECSEEEECSCEEESCGGG
T ss_pred cCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEE-----EcCEEEEEeCCCCChHHh
Confidence 46899999999999987665 7888988752 2 444444 479999999976665544
No 202
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.54 E-value=0.0095 Score=61.49 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 469999999999999999999 999999999874
No 203
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.52 E-value=0.0011 Score=68.56 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=32.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC-C--CeEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~ 80 (538)
..+||+|||+|++|+.+|..|++ | .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 46899999999999999999999 8 999999998764
No 204
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.52 E-value=0.001 Score=75.81 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 80 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (538)
..+||+|||||++|+++|.+|++ |+ +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 36899999999999999999999 98 79999998653
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.52 E-value=0.00099 Score=68.57 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (538)
+||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 489999999999999999998 6899999998753
No 206
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.45 E-value=0.013 Score=60.39 Aligned_cols=33 Identities=36% Similarity=0.543 Sum_probs=30.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 469999999999999999999 999999999874
No 207
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.39 E-value=0.0014 Score=69.92 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=43.5
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCC
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVG 293 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig 293 (538)
+....++.|+++++++.|++|..+++ +|.+. +|+. + .++.||+|+|...+..+|..+|+.
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~~~--------~v~~~--~g~~--i-----~~D~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEENGA--------VVRLK--SGSV--I-----QTDMLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGGGT--------EEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHcCCEEEECCeEEEEecCCC--------EEEEC--CCCE--E-----EcCEEEEccCCCCChHHHHhcCce
Confidence 33455668999999999999976543 35443 5543 2 479999999988777777777763
No 208
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.39 E-value=0.0013 Score=67.80 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=32.0
Q ss_pred CccEEEECCCCchHHHhhhhcC--------CCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ--------NASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~--------g~~VlvlE~G~~~ 80 (538)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5899999999999999999987 7899999998754
No 209
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.39 E-value=0.015 Score=59.29 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 469999999999999999999 999999999864
No 210
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.38 E-value=0.012 Score=56.94 Aligned_cols=54 Identities=20% Similarity=0.300 Sum_probs=41.0
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
.|++++++++|++|..+++ ++.+|++.+ .+|+..++ .++.||+|+|...++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNI-----ELAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEE-----EcCEEEEeeCCccCchHH
Confidence 5889999999999986654 788898886 34654454 479999999976655544
No 211
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.37 E-value=0.0014 Score=67.12 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (538)
.||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 689999999999999999998 5899999999754
No 212
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.33 E-value=0.0012 Score=68.82 Aligned_cols=35 Identities=37% Similarity=0.443 Sum_probs=31.9
Q ss_pred CccEEEECCCCchHHHhhhhcCCCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQNASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~~ 80 (538)
.+||+|||+|++|+++|++|++..+|+|+|+++..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~ 142 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWL 142 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCC
Confidence 57999999999999999999876899999999864
No 213
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.31 E-value=0.002 Score=66.04 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=31.5
Q ss_pred CccEEEECCCCchHHHhhhhcC----CCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ----NASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~~ 80 (538)
..||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 3689999999999999999987 6899999999854
No 214
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.21 E-value=0.039 Score=53.27 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=45.4
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
+.|+++++++.|++|..+ + ++.+|++.+ .+|+...+ .++.||+|+|...+..+|..+|+
T Consensus 202 ~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKEL-----NVNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp CTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEECCHHHHHHTTC
T ss_pred CCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEE-----EcCEEEEEECCCCChhHHhhcCe
Confidence 358999999999999865 3 677888876 34665454 47999999998887777777765
No 215
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.19 E-value=0.0017 Score=65.87 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.2
Q ss_pred cEEEECCCCchHHHhhhhcC----CCeEEEEeccCCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ----NASVLLLERGDSP 80 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~----g~~VlvlE~G~~~ 80 (538)
||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 79999999999999999987 6899999999853
No 216
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.15 E-value=0.023 Score=54.78 Aligned_cols=57 Identities=12% Similarity=0.047 Sum_probs=41.8
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHc
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLS 290 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~S 290 (538)
.|+++++++.|++|..+++ ++.+|.+.+ .+|+..++ .++.||+|+|...+..+|..+
T Consensus 192 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKREL-----VVPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----ECSEEEECSCEEECCGGGBCT
T ss_pred CCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEE-----ecCEEEEEecCccChhhhhcc
Confidence 5889999999999987655 777888874 24654444 479999999986665555433
No 217
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.11 E-value=0.015 Score=60.39 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=29.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999998874
No 218
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.03 E-value=0.0036 Score=65.32 Aligned_cols=37 Identities=8% Similarity=0.160 Sum_probs=32.9
Q ss_pred CCCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 44 VSYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.++..|||||+|+||+.+|.+|++ +.+|+|||+.++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~ 77 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF 77 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc
Confidence 345679999999999999999999 9999999998753
No 219
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.02 E-value=0.011 Score=61.28 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 469999999999999999999 999999999874
No 220
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.02 E-value=0.0033 Score=64.46 Aligned_cols=32 Identities=16% Similarity=0.480 Sum_probs=28.9
Q ss_pred EEEECCCCchHHHhhhhcC-C--CeEEEEeccCCC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-N--ASVLLLERGDSP 80 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~~~ 80 (538)
|||||+|++|+.+|.+|++ | .+|+|+|+.+..
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 8999999999999999998 6 579999998753
No 221
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.01 E-value=0.033 Score=57.38 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 468999999999999999998 999999998864
No 222
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.97 E-value=0.042 Score=53.58 Aligned_cols=59 Identities=17% Similarity=0.118 Sum_probs=41.2
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
+.|+++++++.|++|..+ + ++.+|.+.+. +|+..++ .++.||+|+|.-.+..+|..+|+
T Consensus 203 ~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELAL-----EVDAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp TTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEEECGGGGGSCC
T ss_pred cCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEE-----ecCEEEEeecCCCCchHhhhcce
Confidence 358899999999999873 3 6777887643 4654444 47999999997655555544443
No 223
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.94 E-value=0.0029 Score=67.21 Aligned_cols=34 Identities=29% Similarity=0.562 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHhhhhcC---CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~~ 80 (538)
.||+|||+|++|+++|.+|++ +.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 379999999999999999998 5799999999864
No 224
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.94 E-value=0.0027 Score=64.15 Aligned_cols=59 Identities=3% Similarity=-0.110 Sum_probs=41.0
Q ss_pred hcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCCCC
Q 009272 220 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGVGP 294 (538)
Q Consensus 220 ~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGig~ 294 (538)
..++.++++++++.+..+..+.+. . .|+ ..+|+. + +++.||++.|--. +.++..+|+.+
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~----~--~v~--~~~g~~--i-----~~D~vi~~~g~~~-~~~~~~~gl~~ 269 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEA----M--TVE--TSFGET--F-----KAAVINLIPPQRA-GKIAQSASLTN 269 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTT----T--EEE--ETTSCE--E-----ECSEEEECCCEEE-CHHHHHTTCCC
T ss_pred HHHhcCcEEEeCceEEEEEecccc----e--EEE--cCCCcE--E-----EeeEEEEecCcCC-chhHhhccccc
Confidence 346789999999999998876652 1 233 346654 2 4699999998643 46788888743
No 225
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.92 E-value=0.044 Score=56.90 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=40.1
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCC-CCeEEEEeccCCCceEEEcCCCcCCHHH--HHHcCC
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQL--LMLSGV 292 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~-g~~~~~~~~~~~a~~VVLaaGai~tp~l--Ll~SGi 292 (538)
+.|++++++++|++|..+++ .+ .|.+.+.+ |+..++ .++.||+|+|...+..+ |...|+
T Consensus 251 ~~gV~v~~~~~v~~i~~~~~-----~~-~v~~~~~~~g~~~~i-----~~D~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 251 KQGIDFKLGAKVTGAVKSGD-----GA-KVTFEPVKGGEATTL-----DAEVVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HTTCEEECSEEEEEEEEETT-----EE-EEEEEETTSCCCEEE-----EESEEEECCCCEECCTTSCHHHHTC
T ss_pred hCCCEEEECCeEEEEEEeCC-----EE-EEEEEecCCCceEEE-----EcCEEEEeeCCccCCCccCchhcCc
Confidence 35788999999999987665 33 35555433 544444 46999999998766554 555555
No 226
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.88 E-value=0.026 Score=57.93 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 369999999999999999999 999999998864
No 227
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.87 E-value=0.0022 Score=69.19 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=32.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-C--------CeEEEEeccC-CC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N--------ASVLLLERGD-SP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g--------~~VlvlE~G~-~~ 80 (538)
..+|+|||+|++|+++|++|++ | .+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 5799999999999999999999 8 8999999987 54
No 228
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.86 E-value=0.045 Score=56.19 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=30.4
Q ss_pred CccEEEECCCCchHHHhhhhcC---CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ---NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~---g~~VlvlE~G~~ 79 (538)
.-.|+|||+|..|+-+|..|++ +.+|.++++.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 4579999999999999999987 579999999875
No 229
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.018 Score=59.56 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=27.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 358889999999988888888 888999888764
No 230
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.80 E-value=0.034 Score=57.10 Aligned_cols=34 Identities=29% Similarity=0.484 Sum_probs=30.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 3579999999999999999999 999999999864
No 231
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.65 E-value=0.061 Score=55.37 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 69999999999999999999 999999998864
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.65 E-value=0.018 Score=59.71 Aligned_cols=34 Identities=32% Similarity=0.589 Sum_probs=31.1
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 4579999999999999999999 999999999864
No 233
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.64 E-value=0.063 Score=52.12 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=39.3
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
.|++++++++|++|..+ + ++.+|++.+ .+|+..++ .++.||+|+|...+..+|
T Consensus 201 ~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSEL-----ATDGVFIFIGHVPNTAFV 254 (325)
T ss_dssp TTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGG
T ss_pred CCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEE-----EcCEEEEccCCCCChHHH
Confidence 58899999999999864 3 677888875 25654454 479999999976555443
No 234
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.64 E-value=0.04 Score=56.73 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 235
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.60 E-value=0.031 Score=57.87 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999999874
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.59 E-value=0.038 Score=57.85 Aligned_cols=54 Identities=20% Similarity=0.319 Sum_probs=41.4
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe-CCCCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD-ATDAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~-~~g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
.|+++++++.|++|..+++ ++++|.+.+ .+|+..++ .++.||+|+|...+..+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSV-----ALAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEE-----EcCEEEECcCCCCCchHH
Confidence 5899999999999987655 788999886 34655555 479999999976555544
No 237
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.57 E-value=0.063 Score=55.40 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 369999999999999999999 999999999864
No 238
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.55 E-value=0.036 Score=57.70 Aligned_cols=55 Identities=11% Similarity=0.163 Sum_probs=37.1
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHH--HHHcCC
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQL--LMLSGV 292 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~l--Ll~SGi 292 (538)
+.|++++++++|++|..+++ + |.+...+|+. + .++.||+|+|...+..+ |...|+
T Consensus 235 ~~GV~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--i-----~aD~Vv~a~G~~p~~~~l~l~~~gl 291 (499)
T 1xdi_A 235 ERGVRLFKNARAASVTRTGA-----G---VLVTMTDGRT--V-----EGSHALMTIGSVPNTSGLGLERVGI 291 (499)
T ss_dssp HTTCEEETTCCEEEEEECSS-----S---EEEEETTSCE--E-----EESEEEECCCEEECCSSSCTTTTTC
T ss_pred HCCCEEEeCCEEEEEEEeCC-----E---EEEEECCCcE--E-----EcCEEEECCCCCcCCCcCCchhcCc
Confidence 45889999999999987654 3 3333345543 2 36999999998766655 344444
No 239
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.53 E-value=0.09 Score=55.54 Aligned_cols=32 Identities=34% Similarity=0.501 Sum_probs=30.1
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.++|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 69999999999999999999 999999999874
No 240
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.47 E-value=0.067 Score=54.80 Aligned_cols=33 Identities=30% Similarity=0.446 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 369999999999999999999 999999999874
No 241
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.41 E-value=0.032 Score=57.53 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 242
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.40 E-value=0.067 Score=54.04 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=31.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 3479999999999999999999 999999999874
No 243
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.30 E-value=0.1 Score=53.78 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHhhhhcC--CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ--NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~ 194 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQ 194 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCc
Confidence 479999999999999999987 899999999874
No 244
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.24 E-value=0.0075 Score=61.61 Aligned_cols=57 Identities=14% Similarity=0.233 Sum_probs=41.4
Q ss_pred hcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 220 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 220 ~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
..++.|+++++++.|++|. .+ ++.+.+.+|+..++ +++.||+++|.-.+ .++..+|.
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i-----~~d~vi~~~G~~~~-~~~~~~~~ 265 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEV-----PAKFTMFMPSFQGP-EVVASAGD 265 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEE-----ECSEEEEECEEECC-HHHHTTCT
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEe-----ecceEEEeccCCCc-hHHHhccc
Confidence 4556799999999999884 33 35566666766665 47999999997554 56666654
No 245
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.16 E-value=0.11 Score=54.01 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 368899999999999999988 889999988864
No 246
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.07 E-value=0.088 Score=54.48 Aligned_cols=33 Identities=30% Similarity=0.555 Sum_probs=28.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 368899999999999988888 888999988764
No 247
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.04 E-value=0.051 Score=56.18 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=28.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 368999999999999999988 889999988764
No 248
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.03 E-value=0.096 Score=54.16 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=37.9
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCC-CCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~-g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
+.|+++++++.|++|..++++ . ..|.+.+.. ++..++ .++.||+|+|...+..+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~----~-~~v~~~~~~~~~~~~~-----~~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG----K-LLVKYKNVETGEESED-----VYDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS----C-EEEEEEETTTCCEEEE-----EESEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC----c-EEEEEecCCCCceeEE-----EcCEEEECcccccCcCcC
Confidence 357889999999999876552 3 346666533 444444 479999999986665554
No 249
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.03 E-value=0.14 Score=52.86 Aligned_cols=33 Identities=33% Similarity=0.391 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 368999999999999999988 899999998864
No 250
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.98 E-value=0.083 Score=56.14 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 469999999999999999999 999999999874
No 251
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.78 E-value=0.15 Score=52.69 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=39.2
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCC-CCeEEEEeccCCCceEEEcCCCcCCHHH--HHHcCC
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDAT-DAEHIAYLRNGPKNEIIVSAGALGSPQL--LMLSGV 292 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~-g~~~~~~~~~~~a~~VVLaaGai~tp~l--Ll~SGi 292 (538)
+.|+++++++.|++|...++ ....|.+.+.+ |+..++ .++.||+|+|...+..+ |...|+
T Consensus 237 ~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~~-----~~D~vi~a~G~~p~~~~l~l~~~g~ 299 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKKLPT-----NQLQVTWEDHASGKEDTG-----TFDTVLWAIGRVPETRTLNLEKAGI 299 (488)
T ss_dssp HTTCEEEETEEEEEEEECTT-----SCEEEEEEETTTTEEEEE-----EESEEEECSCEEESCGGGTGGGGTC
T ss_pred HCCCEEEeCCEEEEEEEcCC-----CcEEEEEEeCCCCeeEEE-----ECCEEEEcccCCcccCcCCccccCc
Confidence 35889999999999987544 22345565533 443344 36999999998766655 334444
No 252
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.66 E-value=0.066 Score=54.86 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 469999999999999999999 999999999874
No 253
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.58 E-value=0.13 Score=53.35 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=27.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-----CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-----NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-----g~~VlvlE~G~ 78 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 359999999999999999875 57899998775
No 254
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.36 E-value=0.099 Score=53.72 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=27.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 468888888888888888888 888888888763
No 255
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.32 E-value=0.09 Score=50.93 Aligned_cols=58 Identities=19% Similarity=0.227 Sum_probs=40.5
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
.|+++++++.|++|..++ ...+|.+.+. +|+..++ .++.||+|+|...++.+|..+|+
T Consensus 202 ~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEIL-----EIDDLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp SSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEE-----ECSEEEECCCEECCCGGGGGSSC
T ss_pred CCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEE-----ECCEEEEeeccCCCchHHhhcCc
Confidence 477888899999987654 3456777763 4444444 47999999998776666555554
No 256
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.69 E-value=0.26 Score=51.04 Aligned_cols=57 Identities=16% Similarity=0.315 Sum_probs=38.3
Q ss_pred CCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHH-H-HHHcCC
Q 009272 222 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ-L-LMLSGV 292 (538)
Q Consensus 222 ~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~-l-Ll~SGi 292 (538)
++.|+++++++.|++|..+++ ....|++ .+|+. + .++.||+|+|...+.. | |..+|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~~--i-----~~D~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD-----GSKHVTF--ESGKT--L-----DVDVVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT-----SCEEEEE--TTSCE--E-----EESEEEECSCEEECCGGGTGGGTTC
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----ceEEEEE--CCCcE--E-----EcCEEEECCCCcccccccchhhcCc
Confidence 346899999999999987654 2234444 35642 3 3699999999876654 3 344454
No 257
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.68 E-value=0.23 Score=51.35 Aligned_cols=57 Identities=28% Similarity=0.395 Sum_probs=38.2
Q ss_pred CCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHH-H-HHHcCC
Q 009272 222 NPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQ-L-LMLSGV 292 (538)
Q Consensus 222 ~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~-l-Ll~SGi 292 (538)
++.|+++++++.|++|..+++ ....|++ .+|+. + .++.||+|+|...+.. | |..+|+
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~~--i-----~~D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNAD-----GTRHVVF--ESGAE--A-----DYDVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTT-----SCEEEEE--TTSCE--E-----EESEEEECSCEEESCTTSCGGGGTC
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----CEEEEEE--CCCcE--E-----EcCEEEEccCCCcCccccCchhcCc
Confidence 346899999999999987654 2234444 35642 3 3699999999765554 3 444554
No 258
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.49 E-value=0.38 Score=50.36 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.++|||+|+.|+-.|.-+++ |.+|.|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 369999999999999999999 99999998753
No 259
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.86 E-value=0.39 Score=49.79 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=26.7
Q ss_pred cEEEECCCCchHHHhhhhcC-C--------------CeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N--------------ASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--------------~~VlvlE~G~~ 79 (538)
.++|||+|+.|+-+|..|++ + .+|.|+|+++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 59999999999999988875 2 57888888874
No 260
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.24 E-value=0.074 Score=54.41 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+++|||+|+.|+.+|..|++ |.+|.|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 45789999999999999999999 999999999975
No 261
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.06 E-value=0.086 Score=50.82 Aligned_cols=33 Identities=27% Similarity=0.450 Sum_probs=30.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 69999999999999999999 9999999998753
No 262
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=91.85 E-value=0.4 Score=54.46 Aligned_cols=31 Identities=32% Similarity=0.405 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
.|+|||+|..|+-+|..|++ |. +|.|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999998 85 899999875
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.23 E-value=0.097 Score=52.40 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=31.1
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 69999999999999999999 9999999999864
No 264
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.97 E-value=0.11 Score=44.39 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|..+|..|.+ |.+|.++++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 469999999999999999998 999999998653
No 265
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.79 E-value=0.11 Score=43.48 Aligned_cols=31 Identities=35% Similarity=0.640 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.++|+|+|..|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 49999999999999999999 99999999864
No 266
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.54 E-value=0.18 Score=42.32 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
=.++|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999875
No 267
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.43 E-value=0.13 Score=42.62 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..++|||+|..|..+|..|.+ |.+|.++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 359999999999999999999 99999998754
No 268
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.36 E-value=0.13 Score=52.88 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 479999999999999999999 9999999999753
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.34 E-value=0.16 Score=48.80 Aligned_cols=33 Identities=33% Similarity=0.556 Sum_probs=30.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 469999999999999999999 999999998765
No 270
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.55 E-value=0.15 Score=50.65 Aligned_cols=34 Identities=38% Similarity=0.549 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 369999999999999999999 9999999999753
No 271
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.73 E-value=0.25 Score=42.03 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.++|+|+|..|..+|..|.+ |.+|+++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999998 99999999863
No 272
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.51 E-value=0.24 Score=39.57 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-C-CeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (538)
.++|+|+|..|..+|..|.+ | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 59999999999999999998 8 8999998864
No 273
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=86.84 E-value=0.32 Score=50.29 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 469999999999999999999 9999999999753
No 274
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.81 E-value=0.25 Score=41.08 Aligned_cols=31 Identities=26% Similarity=0.464 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.++|+|+|..|..+|..|.+ |.+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999998754
No 275
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.67 E-value=0.37 Score=49.10 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCe-EEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G~~ 79 (538)
-.|+|||+|..|+=+|..|++ +.+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 469999999999999999999 888 999999864
No 276
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=86.33 E-value=0.56 Score=47.63 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=32.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSPY 81 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~~ 81 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 369999999999999999999 99999999998653
No 277
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.07 E-value=0.32 Score=47.80 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.|+|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 69999999999999999999 999999999875
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.96 E-value=0.43 Score=48.95 Aligned_cols=33 Identities=9% Similarity=0.121 Sum_probs=30.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.|+|||+|..|+=+|..|++ |.+|.|+++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 369999999999999999999 999999998864
No 279
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.74 E-value=0.43 Score=45.80 Aligned_cols=31 Identities=29% Similarity=0.549 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|.|||+|..|..+|..|++ |.+|.++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 39999999999999999999 99999998865
No 280
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.66 E-value=0.34 Score=46.85 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|.|||+|..|...|..++. |++|.|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998764
No 281
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=85.38 E-value=0.51 Score=49.38 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 469999999999999999999 999999999986
No 282
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=85.09 E-value=0.44 Score=48.52 Aligned_cols=34 Identities=26% Similarity=0.575 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 379999999999999999999 9999999999853
No 283
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.06 E-value=0.5 Score=45.56 Aligned_cols=31 Identities=29% Similarity=0.431 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999998864
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.05 E-value=0.5 Score=49.52 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 469999999999999999999 9999999999863
No 285
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=84.97 E-value=0.56 Score=45.35 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=40.6
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-CCCeEEEEeccCCCceEEEcCCCcCCHHHH
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-TDAEHIAYLRNGPKNEIIVSAGALGSPQLL 287 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-~g~~~~~~~~~~~a~~VVLaaGai~tp~lL 287 (538)
+.|+++++++.|++|..++++ .++.+|.+.+. +|+..++ .++.||+|+|...+..++
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDL-----KVSGLFFAIGHEPATKFL 264 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEE-----ecCEEEEEeCCccchHHh
Confidence 358899999999999875531 15677888753 4554444 479999999987665544
No 286
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.89 E-value=0.45 Score=47.88 Aligned_cols=35 Identities=34% Similarity=0.656 Sum_probs=31.6
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.-.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 3469999999999999999999 9999999999753
No 287
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.53 E-value=0.6 Score=45.30 Aligned_cols=33 Identities=39% Similarity=0.521 Sum_probs=30.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ +.+|.++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 469999999999999999999 999999999864
No 288
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.45 E-value=0.36 Score=43.82 Aligned_cols=30 Identities=30% Similarity=0.495 Sum_probs=28.2
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|||+|..|..+|..|.+ |.+|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999998 99999999765
No 289
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.42 E-value=0.87 Score=46.41 Aligned_cols=62 Identities=11% Similarity=0.111 Sum_probs=44.2
Q ss_pred eCCCCccccHHHHHhhcCCCCeEEEeccEEEEEEec--CCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCc
Q 009272 205 IDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFR--NKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 281 (538)
Q Consensus 205 ~~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~--~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai 281 (538)
++.+|.......+...+++.|.+|+++++|++|..+ ++ ++++|.. +|+. + .++.||+|+|.+
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~~--~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLGT--F-----KAPLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTEE--E-----ECSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCeE--E-----ECCEEEECCCcc
Confidence 445564443344555566679999999999999987 54 8888865 3532 3 378999999985
No 290
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.28 E-value=0.48 Score=45.88 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|+..|..|++ |.+|.++.|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999998864
No 291
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.94 E-value=0.72 Score=38.61 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+.|||+|..|..+|..|.+ |.+|.+.++.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 49999999999999999999 98899998764
No 292
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=83.48 E-value=0.56 Score=48.07 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 369999999999999999999 9999999998753
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=82.79 E-value=0.59 Score=49.03 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 469999999999999999999 9999999999863
No 294
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.63 E-value=0.62 Score=47.65 Aligned_cols=31 Identities=26% Similarity=0.576 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+||+|+|-.|..+|..|++ |++|+|||+-+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999998 99999999875
No 295
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.60 E-value=0.7 Score=44.38 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.++|||+|..|+-+|..|++ +.+|.++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 369999999999999999999 999999999875
No 296
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.16 E-value=0.85 Score=43.96 Aligned_cols=34 Identities=35% Similarity=0.564 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 469999999999999999999 9999999998764
No 297
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=82.07 E-value=0.77 Score=41.78 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=27.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
--|+|||+|..|...|..|.+ |.+|.|++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 459999999999999999999 999999975
No 298
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.80 E-value=0.73 Score=46.30 Aligned_cols=34 Identities=38% Similarity=0.463 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 469999999999999999999 9999999999864
No 299
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.50 E-value=0.74 Score=46.08 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 469999999999999999999 9999999999864
No 300
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=81.39 E-value=0.62 Score=43.87 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=28.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--|+|||+|-.|...|..|.+ |.+|.|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 459999999999999999999 99999998643
No 301
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=81.34 E-value=0.73 Score=47.17 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 469999999999999999999 9999999999753
No 302
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=81.21 E-value=0.57 Score=44.71 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999874
No 303
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.98 E-value=1.2 Score=41.96 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=29.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.++|||+|..|+-+|..|++ | +|.++++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3479999999999999999999 9 9999998864
No 304
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=80.82 E-value=0.8 Score=43.33 Aligned_cols=31 Identities=23% Similarity=0.189 Sum_probs=28.5
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
+.|||+|..|...|..|++ |.+|.++++.+.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 7899999999999999999 999999988753
No 305
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=80.71 E-value=0.72 Score=48.94 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.++|||+|..|+-+|..|++ |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 69999999999999999999 9999999988
No 306
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.68 E-value=0.89 Score=40.92 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
..+.|||+|..|...|..|++ |.+|.++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 459999999999999999999 999999987653
No 307
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.40 E-value=0.94 Score=42.92 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|.|||+|..|..+|..|++ |.+|.+.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999 99999998765
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=80.24 E-value=0.82 Score=42.49 Aligned_cols=34 Identities=21% Similarity=0.387 Sum_probs=30.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
...|+|||+|..|+.+|..|++ |. +|.|+++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 3569999999999999999999 95 8999998764
No 309
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=79.80 E-value=2.5 Score=44.95 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=46.1
Q ss_pred eeeCCCCccccHHHHHhhcCCCCeEEEeccEEEEEEecCC-CCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCC
Q 009272 203 TIIDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNK-GKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGA 280 (538)
Q Consensus 203 ~~~~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~~~-~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGa 280 (538)
..++.+|....+..+.+.+...|.+|++++.|++|+.+++ + +++||.. .+|+. + .++.||..+..
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~~--~~Ge~--i-----~A~~VVs~~~~ 435 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVID--QFGQR--I-----ISKHFIIEDSY 435 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEEE--TTSCE--E-----ECSEEEEEGGG
T ss_pred eEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEEe--CCCCE--E-----EcCEEEEChhh
Confidence 4445566554455566667778999999999999999873 3 8999873 36754 2 36888886654
No 310
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=79.76 E-value=0.78 Score=44.68 Aligned_cols=30 Identities=30% Similarity=0.544 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.+.|||+|..|+..|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999885
No 311
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.38 E-value=0.9 Score=39.71 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHhhhhcC--CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ--NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~--g~~VlvlE~G~ 78 (538)
-.++|||.|..|..+|..|.+ |.+|+++|+.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 359999999999999999976 88999999865
No 312
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=79.12 E-value=1.2 Score=43.02 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
.-+.|||+|..|..+|..|++ |. +|.++++.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 459999999999999999999 87 999999865
No 313
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=78.98 E-value=1 Score=45.61 Aligned_cols=62 Identities=16% Similarity=0.144 Sum_probs=43.7
Q ss_pred eCCCCccccHHHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCc
Q 009272 205 IDQNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 281 (538)
Q Consensus 205 ~~~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai 281 (538)
++.+|.......+...+++.|.+|+++++|++|..+++ ++++|.. +|+. + .++.||+|+|..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~~--~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGEV--A-----RCKQLICDPSYV 289 (433)
T ss_dssp EETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTEE--E-----ECSEEEECGGGC
T ss_pred EeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCeE--E-----ECCEEEECCCCC
Confidence 44556433333355555566899999999999998776 8888763 4542 3 479999999975
No 314
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=78.21 E-value=1.1 Score=46.71 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=31.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 569999999999999999999 9999999999754
No 315
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=78.15 E-value=1.1 Score=43.33 Aligned_cols=32 Identities=28% Similarity=0.432 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
.-+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 359999999999999999999 87 999998864
No 316
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=77.65 E-value=1.1 Score=43.01 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999999 99999998754
No 317
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.31 E-value=1.6 Score=42.42 Aligned_cols=35 Identities=20% Similarity=0.509 Sum_probs=30.9
Q ss_pred CccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~ 80 (538)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4679999999999999999999 8 489999988754
No 318
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=76.81 E-value=1.1 Score=43.31 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|.|||+|..|...|..|++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998765
No 319
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=76.56 E-value=1.3 Score=45.25 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.|.|||+|..|..+|..|++ |.+|+++++.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998765
No 320
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.49 E-value=1.2 Score=43.10 Aligned_cols=29 Identities=24% Similarity=0.587 Sum_probs=26.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.+.|||+|..|+..|..|++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 58999999999999999999 9999998 53
No 321
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.34 E-value=2.1 Score=40.72 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.4
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.+.|||.|..|...|..|++ |++|.+.++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3469999999999999999999 999999988764
No 322
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.11 E-value=1.2 Score=44.82 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.|||||.|-.|..+|..|.+ |.+|++||+.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999875
No 323
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=76.06 E-value=1.2 Score=46.32 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 59999999999999999999 9999999985
No 324
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=75.94 E-value=1.3 Score=43.35 Aligned_cols=32 Identities=34% Similarity=0.448 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999999 99999998754
No 325
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.47 E-value=1.6 Score=41.45 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.++|||+|..|+-+|..|++ +.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 469999999999999999999 9999999998754
No 326
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=75.45 E-value=1.3 Score=45.53 Aligned_cols=32 Identities=25% Similarity=0.463 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.-+.|||.|..|+..|..|++ |.+|.++++.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 458999999999999999999 99999998764
No 327
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=75.32 E-value=1.3 Score=42.81 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=26.8
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
+.|||+|..|...|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999988
No 328
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=74.79 E-value=1.7 Score=38.80 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=27.5
Q ss_pred EEEEC-CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+.||| +|..|..+|..|++ |.+|.++++.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999 99999999999999 99999998764
No 329
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=74.65 E-value=1.5 Score=43.60 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=30.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.--|+|||+|..|..+|..|.. |.+|.++++.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4569999999999999999988 999999988764
No 330
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=74.50 E-value=1.8 Score=41.94 Aligned_cols=31 Identities=23% Similarity=0.481 Sum_probs=28.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.|+|||+|..|+-+|..|++ + +|.++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 479999999999999999999 7 799999885
No 331
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=74.42 E-value=1.8 Score=43.91 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=27.8
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+.|||.|..|+..|..|++ |.+|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998754
No 332
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=74.10 E-value=1.3 Score=40.54 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=28.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.++|||.|..|..+|..|.+ |. |+++|+.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 359999999999999999999 89 99999875
No 333
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=74.08 E-value=2.1 Score=43.48 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-|.|||+|..|...|..|++ |.+|+++++.+.
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 59999999999999999999 999999988753
No 334
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=73.61 E-value=2 Score=39.82 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=29.7
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
...|+|||.|..|+.+|..|+. |. ++.|++....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4579999999999999999999 85 8899988754
No 335
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=73.52 E-value=1.7 Score=42.67 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||+|..|...|..|++ |.+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999 99999998864
No 336
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=73.51 E-value=1.6 Score=42.99 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=30.3
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
+--|+|+|+|.+|..+|.-|.. |. +|.|+++...
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 4569999999999999999998 97 9999998763
No 337
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=73.34 E-value=1.6 Score=43.06 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=30.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.|+|||+|..|..+|..|.. |.+|.++++.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4569999999999999999988 999999988763
No 338
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=72.84 E-value=2 Score=41.21 Aligned_cols=31 Identities=32% Similarity=0.394 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
.+.|||+|..|+..|..|+.|.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999998778999998875
No 339
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=72.80 E-value=1.8 Score=42.11 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=29.6
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+..+.|||+|..|+..|.+|++ |.+|.++.+.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4569999999999999999999 99999998754
No 340
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=72.71 E-value=1.7 Score=42.22 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
.-|.|||+|..|..+|..|+. |+ +|.++++-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 469999999999999999999 87 999998864
No 341
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=72.52 E-value=1.8 Score=42.65 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=30.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
+--|+|+|+|.+|..+|..|.. |. +|.|+++-..
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGI 227 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 4669999999999999999999 86 8999998753
No 342
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=72.36 E-value=2.3 Score=43.20 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.|.|||.|.+|.++|..|.+ |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 59999999999999999999 99999999875
No 343
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=72.35 E-value=1.8 Score=40.69 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++|+|+|..|..+|..|++ |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 99999997664
No 344
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=72.27 E-value=1.7 Score=41.21 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=30.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~ 79 (538)
..-|+|||.|..|+.+|..|+. | .++.|++....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 5679999999999999999999 8 48999987764
No 345
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=72.27 E-value=2 Score=43.78 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=36.8
Q ss_pred CCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeC-------------CCCeEEEEeccCCCceEEEcCCCcCCH
Q 009272 223 PSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDA-------------TDAEHIAYLRNGPKNEIIVSAGALGSP 284 (538)
Q Consensus 223 ~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~-------------~g~~~~~~~~~~~a~~VVLaaGai~tp 284 (538)
+.|+++++++.+.+|.-++++ .++.+|++.+. +|+..++ +++.||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~---~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i-----~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDG---RRAAGIRLAVTRLEGIGEATRAVPTGDVEDL-----PCGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTS---SSEEEEEEEEEEEESSGGGCEEEEEEEEEEE-----ECSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCC---ceEEEEEEEEEEEccccCCCcccCCCceEEE-----EcCEEEECCCCCCCC
Confidence 368999999999998765321 05667766521 2333344 579999999987666
No 346
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.81 E-value=1.8 Score=44.06 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|+..|..|++ |.+|.++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999998765
No 347
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=71.70 E-value=2.3 Score=40.25 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.|||.|..|...|..|++ |++|.+.++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 38899999999999999999 999999988753
No 348
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=71.52 E-value=1.7 Score=42.85 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.|.|||+|..|...|..|++ |.+|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999 99999998764
No 349
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=71.49 E-value=1.9 Score=38.84 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|...|..|++ |.+|.++++.+
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999998 99999998764
No 350
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=71.41 E-value=2 Score=39.59 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=29.7
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
...+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3458999999999999999999 99999998875
No 351
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=71.33 E-value=1.9 Score=41.26 Aligned_cols=30 Identities=27% Similarity=0.450 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
|.|||+|..|..+|..|+. |. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7899999999999999998 87 899998754
No 352
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=70.66 E-value=1.9 Score=43.93 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
-.|+|||+|..|+-+|..|.+ |. +|.++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 469999999999999999888 86 6999998875
No 353
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=70.38 E-value=2 Score=42.87 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.|+|||+|..|..+|..|.. |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 459999999999999999988 99999998765
No 354
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.37 E-value=2.1 Score=42.27 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--|+|+|+|..|..+|..|.. |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 459999999999999999998 99999998764
No 355
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=70.22 E-value=2.8 Score=39.77 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..+.|||.|..|...|..|++ |.+|.++++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 459999999999999999999 99999988754
No 356
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=70.16 E-value=2.1 Score=43.70 Aligned_cols=32 Identities=34% Similarity=0.325 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--++|+|+|..|..+|.+|+. |.+|++.|+.+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 348999999999999999999 99999998754
No 357
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.10 E-value=2.1 Score=46.56 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=29.8
Q ss_pred ccEEEEC--CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIG--GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVG--sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 3699998 99999999999999 99999999987
No 358
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=70.01 E-value=1.9 Score=44.19 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|.|||+|..|...|..|++ |.+|.+.++.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999999999999999999 99999998765
No 359
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=69.85 E-value=2.1 Score=41.42 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-|.|||+|..|..+|..|+. |. +|.++|.-.
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 59999999999999999999 87 999998864
No 360
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=69.84 E-value=2.5 Score=40.30 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=28.1
Q ss_pred cEEEEC-CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.||| .|..|...|..|++ |.+|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 499999 99999999999999 99999997654
No 361
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=69.83 E-value=3.3 Score=43.28 Aligned_cols=35 Identities=20% Similarity=0.516 Sum_probs=30.5
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~~ 80 (538)
...|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4579999999999999999999 84 89999877653
No 362
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=69.65 E-value=2.8 Score=39.93 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ |++|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48999999999999999999 99999998764
No 363
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=69.60 E-value=3.2 Score=39.94 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999 99999998765
No 364
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=69.14 E-value=2.3 Score=41.81 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.|+|+|+|..|..+|..|.. |.+|.++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999988 99999998864
No 365
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=69.00 E-value=2.3 Score=40.13 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.|||.|..|...|..|++ |++|.+.++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 38899999999999999999 999999988753
No 366
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=68.60 E-value=2.6 Score=39.43 Aligned_cols=34 Identities=26% Similarity=0.511 Sum_probs=29.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.++|||+|.+|..+|..|++ |.+|.|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3469999999999999999999 999999988753
No 367
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=68.44 E-value=4.4 Score=34.89 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=37.1
Q ss_pred hhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHHHHHcCC
Q 009272 219 EYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQLLMLSGV 292 (538)
Q Consensus 219 ~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~lLl~SGi 292 (538)
..+++.|++++.+ +|++|..+++ . +.+...+| ++ .++.||+|+|.. |.++...|+
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i-----~ad~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VE-----KAERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EE-----EEEEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EE-----EECEEEECCCCC--CCccccCCC
Confidence 3455678999999 9999987655 2 33333345 23 369999999975 455555554
No 368
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=68.39 E-value=6.2 Score=40.31 Aligned_cols=63 Identities=13% Similarity=0.114 Sum_probs=39.8
Q ss_pred CCCccccHHHHHhhcCCCC-eEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCH
Q 009272 207 QNSQRHTAADLLEYANPSG-LTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSP 284 (538)
Q Consensus 207 ~~g~r~~~~~~l~~~~~~~-~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp 284 (538)
.+|.......+...+.+.| ++|+++++|++|..+++ . |.+...+|+. + .++.||+|+|.-...
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~-----~ad~vI~a~~~~~l~ 314 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--F-----VAKRVVCTIPLNVLS 314 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--E-----EEEEEEECCCGGGGG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--E-----EcCEEEECCCHHHHh
Confidence 4454333333444444556 99999999999998765 3 3344345643 2 369999999964433
No 369
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=68.38 E-value=2.4 Score=40.87 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
+.|||+|..|..+|..|++ |. +|.++++.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999999 88 999998764
No 370
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=68.33 E-value=2.5 Score=40.57 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|..|++ |++|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 459999999999999999999 99999998865
No 371
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=68.29 E-value=2.8 Score=40.46 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
.-|.|||+|..|..+|..|+. |. +|.++|.-.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 359999999999999999999 87 899998754
No 372
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=68.20 E-value=2.6 Score=41.86 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=29.6
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
.-.|+|||+|..|..+|..|.. |.+|.++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3469999999999999999888 999999988753
No 373
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.10 E-value=2.5 Score=41.85 Aligned_cols=32 Identities=38% Similarity=0.442 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--|+|||+|..|..+|..|.. |.+|+++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 459999999999999999988 99999998764
No 374
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=67.91 E-value=2.5 Score=47.55 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=30.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 59999999999999999999 9999999998753
No 375
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=67.80 E-value=2.5 Score=40.31 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 359999999999999999999 99999998765
No 376
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=67.57 E-value=3.1 Score=39.39 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=26.8
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++|+|+|..|..+|..|++ | +|.++.|..
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 49999999999999999999 9 999987653
No 377
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=67.45 E-value=2.2 Score=40.08 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998764
No 378
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=67.23 E-value=2.6 Score=44.10 Aligned_cols=35 Identities=20% Similarity=0.509 Sum_probs=30.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-C-CeEEEEeccCCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGDSP 80 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~~~ 80 (538)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4579999999999999999999 8 489999888753
No 379
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.18 E-value=3.4 Score=38.68 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=28.1
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
|+|.|+|..|..++.+|.+ |.+|.++.|.+
T Consensus 8 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 8 LLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred EEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 9999999999999999999 99999998865
No 380
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=67.13 E-value=3.1 Score=39.64 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=28.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-.++|||+|.+|..+|..|++ |. +|.|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999999 96 899997764
No 381
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=67.09 E-value=2.8 Score=41.10 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=30.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
...|+|||.|..|+.+|..|+. |. ++.|++....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4679999999999999999999 84 8999987764
No 382
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=66.81 E-value=2.8 Score=38.91 Aligned_cols=30 Identities=23% Similarity=0.514 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHhhhhcC-C-CeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (538)
+.|||.|..|...|..|++ | .+|.++++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 7899999999999999999 9 9999998764
No 383
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=66.72 E-value=2.7 Score=40.29 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHhhhhcC-C--CeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~ 78 (538)
-+.|||+|..|..+|..|++ | .+|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 38899999999999999999 8 6899998864
No 384
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=66.70 E-value=3.5 Score=38.97 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999 99999998764
No 385
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=66.52 E-value=3.5 Score=39.06 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ |.+|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 49999999999999999999 99999998764
No 386
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=66.45 E-value=2.3 Score=42.04 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHhhhhcC-C-------CeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N-------ASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-------~~VlvlE~G~~ 79 (538)
-+.|||+|..|...|..|++ | .+|.++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 39999999999999999999 9 89999988754
No 387
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.36 E-value=3.2 Score=39.94 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHhhhhcC-C-CeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N-ASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999999875
No 388
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=66.19 E-value=2.9 Score=39.24 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+.|||.|..|...|..|++ |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999997764
No 389
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=65.99 E-value=3.3 Score=41.99 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=30.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
...+-|||.|..|+..|..|++ |++|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4568999999999999999999 999999998764
No 390
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=65.92 E-value=3.1 Score=41.95 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
...-|||.|..|+..|..|++ |++|+++++.+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 357899999999999999999 99999998875
No 391
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.90 E-value=3 Score=39.09 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=28.5
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
|+|.|+|..|..++.+|.+ |.+|.++.|...
T Consensus 6 ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 6 ILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 9999999999999999998 999999988754
No 392
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.88 E-value=3 Score=39.59 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--+.|||.|..|..+|.+|.. |.+|++.++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999988 99999998764
No 393
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=65.84 E-value=2.9 Score=45.26 Aligned_cols=31 Identities=35% Similarity=0.548 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|-|||+|..|..+|..|++ |++|+++++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998875
No 394
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=65.81 E-value=2.2 Score=39.04 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=26.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
.+.|||.|..|.+.|..|.+ |++|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 58999999999999999999 999998876
No 395
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=65.60 E-value=2.9 Score=41.02 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
--|+|+|.|..|..+|.+|.+ |.+|++.++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 349999999999999999999 9999998753
No 396
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=65.51 E-value=2.1 Score=41.76 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHhhhhcC-C-------CeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N-------ASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g-------~~VlvlE~G~~ 79 (538)
.+.|||+|..|...|..|++ | .+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 59999999999999999999 8 89999988754
No 397
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=65.39 E-value=2.7 Score=42.59 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-|.|||.|.+|+++|..|++ |.+|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 38999999999999998988 999999998764
No 398
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=65.28 E-value=3.1 Score=43.33 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 369999999999999999999 9999999998754
No 399
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.94 E-value=3.2 Score=39.54 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 359999999999999999998 99999998764
No 400
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=64.52 E-value=3.2 Score=39.89 Aligned_cols=31 Identities=32% Similarity=0.395 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (538)
--+.|||+|..|..+|..|+. |. .|.++|.-
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 359999999999999999999 88 99999886
No 401
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=64.52 E-value=3.8 Score=40.93 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
+.|||.|..|+..|..|++|.+|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999988999998764
No 402
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=64.13 E-value=1.8 Score=44.05 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=41.3
Q ss_pred CCCccccHHHHHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHH
Q 009272 207 QNSQRHTAADLLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQL 286 (538)
Q Consensus 207 ~~g~r~~~~~~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~l 286 (538)
..|.......+...+.+.|++|+++++|++|..+++ +++.|.+ ++.. + .++.||+|+++....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~---~~~~--~-----~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL---RDSS--L-----EADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC---SSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE---CCeE--E-----EcCEEEECCCHHHHHHh
Confidence 445433333344445556999999999999998765 3334432 3332 2 36999999987555444
No 403
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.12 E-value=3.8 Score=36.50 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.3
Q ss_pred EEEECC-CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
|+|+|+ |..|..++.+|.+ |.+|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 899995 9999999999999 99999998875
No 404
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=63.97 E-value=3.5 Score=40.49 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=30.0
Q ss_pred CCccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 45 SYYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 45 ~~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+.-.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34579999999999999999999 99999998765
No 405
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=63.86 E-value=3.4 Score=38.82 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|..+|..|.+ |.+|.+..+..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 88999998764
No 406
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=63.76 E-value=4.1 Score=38.99 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|..|++ |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 459999999999999999999 99999998764
No 407
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=63.65 E-value=3.6 Score=44.52 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--|-|||+|..|.-+|..++. |.+|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 459999999999999999999 99999998765
No 408
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=63.65 E-value=4.5 Score=36.13 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=28.0
Q ss_pred EEEEC-CCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 49 YIVIG-GGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 49 vIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++|.| +|..|..++.+|.+ |.+|.++.|.+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 78999 79999999999999 999999988763
No 409
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=63.62 E-value=4.5 Score=38.15 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=28.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-.++|+|+|.+|..+|..|++ |. +|.|+.|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999 86 899997764
No 410
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=63.59 E-value=3.4 Score=39.65 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (538)
-.+.|||.|..|...|..|++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 359999999999999999999 98 99999885
No 411
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=63.57 E-value=3.3 Score=41.81 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..+.|||.|..|+.+|..||+ |++|+.+|..+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 569999999999999999999 99999998654
No 412
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=63.53 E-value=3.3 Score=40.45 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=30.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
...|+|||.|..|+.+|..|+. |. ++.|++-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4679999999999999999999 85 8999987654
No 413
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=63.46 E-value=3.8 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
-.+.|||.|..|+..|..|++|.+|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 35999999999999999999999999998765
No 414
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=63.40 E-value=3.5 Score=41.12 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=25.6
Q ss_pred cEEEECCCCchHHHhhhhcC--CCeEEEEe
Q 009272 48 DYIVIGGGTAGCPLAASLSQ--NASVLLLE 75 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~--g~~VlvlE 75 (538)
.+.|||+|..|...|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999975 78999998
No 415
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=63.39 E-value=3.4 Score=38.77 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=27.1
Q ss_pred EEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
+.|||.|..|...|..|++ |. +|.+.++.+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 8899999999999999998 87 899987764
No 416
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=63.08 E-value=3.7 Score=43.05 Aligned_cols=34 Identities=35% Similarity=0.637 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
-.+||||.|-.|..+|..|.+ |.+|++||+-+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 469999999999999999999 9999999988753
No 417
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=62.84 E-value=3.8 Score=41.31 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=29.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
...|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 5679999999999999999999 84 8999987654
No 418
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=62.82 E-value=3.6 Score=38.83 Aligned_cols=32 Identities=31% Similarity=0.321 Sum_probs=27.9
Q ss_pred ccEEEEC-CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--++|+| +|..|..+|..|++ |.+|.++.|..
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 3589999 89999999999999 99999987753
No 419
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=62.74 E-value=3.8 Score=39.39 Aligned_cols=31 Identities=13% Similarity=0.291 Sum_probs=27.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (538)
--++|+|+|-+|..+|..|++ |. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 359999999999999999999 97 89999876
No 420
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=62.71 E-value=1.9 Score=39.04 Aligned_cols=31 Identities=29% Similarity=0.623 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEE-EeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLL-LERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~Vlv-lE~G~ 78 (538)
.+.|||+|..|...|..|++ |.+|.+ .++.+
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 49999999999999999999 999888 66654
No 421
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=62.69 E-value=3.9 Score=39.19 Aligned_cols=30 Identities=30% Similarity=0.490 Sum_probs=27.1
Q ss_pred EEEECCCCchHHHhhhhcC---CCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ---NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~---g~~VlvlE~G~ 78 (538)
+.|||+|..|..+|..|++ +.+|.++++.+
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999987 57999999865
No 422
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=62.66 E-value=3.6 Score=39.55 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
--+.|||.|..|...|..|.+ |. +|.+.++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 359999999999999999999 88 999998765
No 423
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=62.37 E-value=4.2 Score=41.64 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+-++.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999 99999998764
No 424
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=62.01 E-value=3.6 Score=38.74 Aligned_cols=31 Identities=13% Similarity=0.341 Sum_probs=28.2
Q ss_pred cEEEECC-CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||. |..|...|..|++ |.+|.++++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4999999 9999999999999 99999998764
No 425
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=61.98 E-value=3.5 Score=38.78 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=28.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
-.++|||+|.+|..+|..|++ |. +|.|+.|...
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 359999999999999999999 97 8999987753
No 426
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.97 E-value=4.1 Score=35.75 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=28.3
Q ss_pred cEEEECC-CCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-++|+|+ |..|..++.+|.+ |.+|.++.|.+.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 3899997 9999999999998 999999988753
No 427
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=61.94 E-value=3.9 Score=38.65 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
--++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 459999999999999999999 87 799987764
No 428
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=61.93 E-value=2.4 Score=41.15 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-.+||+|.|-.|..+|..|.+ |. |+++|+.+.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChh
Confidence 359999999999999999998 99 999998763
No 429
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=61.55 E-value=4.5 Score=38.38 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=28.1
Q ss_pred ccEEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
--|-|||.|..|...|..|+.|++|.+.++.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 45899999999999999987778999998875
No 430
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=61.54 E-value=4.1 Score=36.40 Aligned_cols=30 Identities=30% Similarity=0.481 Sum_probs=27.3
Q ss_pred EEEECC-CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|.|+ |..|..++.+|.+ |.+|.++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899997 9999999999998 99999998764
No 431
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=61.53 E-value=4.1 Score=36.87 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=28.1
Q ss_pred cEEEECC-CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++|.|+ |..|..+|.+|.+ |.+|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899997 9999999999999 99999998865
No 432
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=61.06 E-value=4 Score=39.07 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=27.4
Q ss_pred cEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-|.|||+|..|..+|..|+. |. +|.++|.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 38999999999999999998 86 899998754
No 433
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=60.91 E-value=4.1 Score=37.79 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=27.0
Q ss_pred cEEEECC-C-CchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGG-G-TAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGs-G-~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
=++|.|+ | -.|..+|.+|++ |.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3899998 7 499999999999 99999997764
No 434
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=60.88 E-value=5.1 Score=38.19 Aligned_cols=32 Identities=31% Similarity=0.452 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|.+|++ |.+|.+.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999999 99999998765
No 435
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=65.13 E-value=1.8 Score=38.70 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|.+|.+ |.+|.++++.+
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48999999999999999999 99999988765
No 436
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=60.87 E-value=4.1 Score=37.76 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-++|||+|.+|..++..|.+ |. +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999 86 899998864
No 437
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=60.59 E-value=3.8 Score=41.69 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
-|+|||+|..|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 49999999999999999999 9999999863
No 438
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=60.47 E-value=6 Score=40.12 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++|+|+|..|..+|..|++ |.+|.++.|..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 38999999999999999999 99999998753
No 439
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=60.32 E-value=5 Score=40.85 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHhhhhcCCCeEEEEeccCC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQNASVLLLERGDS 79 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~~ 79 (538)
-.++|+|+|-.|..+|..|.++.+|-|||+...
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~ 268 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQ 268 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH
T ss_pred cEEEEEcchHHHHHHHHHhhhcCceEEEecCHH
Confidence 369999999999999999977889999998763
No 440
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=60.16 E-value=5.3 Score=37.67 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=27.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-.++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 459999999999999999999 95 999997764
No 441
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=59.85 E-value=5.6 Score=40.58 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHhhhhcC--CC-eEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ--NA-SVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~--g~-~VlvlE~G~~ 79 (538)
.+.|||.|..|+..|..|++ |+ +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 59999999999999999987 69 9999998864
No 442
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.64 E-value=4.5 Score=43.56 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=30.2
Q ss_pred cEEEEC--CCCchHHHhhhhcC-CCeEEEEeccCCC
Q 009272 48 DYIVIG--GGTAGCPLAASLSQ-NASVLLLERGDSP 80 (538)
Q Consensus 48 DvIIVG--sG~aG~~~A~~La~-g~~VlvlE~G~~~ 80 (538)
.|+||| +|..|+-+|..|++ |.+|.++|+.+..
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 599999 99999999999999 9999999998753
No 443
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=59.50 E-value=4.3 Score=41.59 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--|+|||.|..|..+|..|.. |.+|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999988 99999998765
No 444
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=59.42 E-value=4 Score=37.77 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHhhhhcC-C----CeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N----ASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g----~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 49999999999999999998 8 6899998765
No 445
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=59.33 E-value=4.2 Score=41.66 Aligned_cols=31 Identities=29% Similarity=0.404 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998754
No 446
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=59.17 E-value=4.5 Score=41.45 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999 99999998764
No 447
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=59.06 E-value=4.6 Score=40.43 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 459999999999999999988 99999999764
No 448
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=59.06 E-value=4.5 Score=39.50 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G 77 (538)
--|+|+|.|..|..+|.+|.+ |.+|++.+.-
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 459999999999999999999 9999988753
No 449
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=58.82 E-value=9.1 Score=39.32 Aligned_cols=51 Identities=20% Similarity=0.262 Sum_probs=37.2
Q ss_pred HHhhcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCc
Q 009272 217 LLEYANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 281 (538)
Q Consensus 217 ~l~~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai 281 (538)
+...+.+.|++++.+ +|++|..++++ .+.+|.+. +|+ ++ .++.||.|+|..
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~-----~ad~vV~A~G~~ 229 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EI-----SGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EE-----ECSEEEECCGGG
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----EcCEEEECCCcc
Confidence 334455579999999 99999886553 66777664 464 23 479999999974
No 450
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=58.64 E-value=3.9 Score=37.94 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=25.4
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEec
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLER 76 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~ 76 (538)
+.|||.|..|...|..|++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999988655
No 451
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=58.57 E-value=3.4 Score=44.68 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|-|||+|..|...|..|++ |++|+++++.+
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999998875
No 452
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=58.53 E-value=5.3 Score=39.03 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=27.7
Q ss_pred EEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
++|||||.-|..+|+.+.+ |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 8999999999999998888 999999987654
No 453
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=58.40 E-value=4.6 Score=42.68 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=30.0
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccCC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGDS 79 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~~ 79 (538)
..-|+|||.|..|+.+|..|+. |. ++.|++....
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~V 52 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTI 52 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence 3569999999999999999999 84 8999997764
No 454
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=58.31 E-value=4.8 Score=38.39 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=27.8
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
.-|.|||+|..|..+|+.|+. |. .|.|+|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 459999999999999999998 87 899998865
No 455
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=58.11 E-value=5 Score=37.61 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-.++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 459999999999999999999 94 899987754
No 456
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=57.82 E-value=4.7 Score=39.23 Aligned_cols=31 Identities=29% Similarity=0.355 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+.|||.|..|.+.|..|.+ |.+|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 38999999999999999999 99999998764
No 457
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=57.72 E-value=5.2 Score=38.33 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=27.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G 77 (538)
--++|+|+|-+|..+|..|++ |. +|.|+-|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 459999999999999999999 86 89999877
No 458
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=57.64 E-value=4.8 Score=37.37 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCe-EEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NAS-VLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~-VlvlE~G~ 78 (538)
.+.|||.|..|...|..|++ |.+ |.++++.+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 49999999999999999999 988 88888754
No 459
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=57.56 E-value=4.7 Score=38.77 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-C----CeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-N----ASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g----~~VlvlE~G~ 78 (538)
-.+.|||.|..|...|..|++ | .+|.+.++.+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 359999999999999999998 8 7899998765
No 460
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=57.45 E-value=7.8 Score=36.09 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=26.6
Q ss_pred EEEECC---CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGG---GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGs---G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|.|+ |..|..+|.+|++ |.+|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 5889999999999 99999998764
No 461
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=57.27 E-value=6.2 Score=36.96 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=27.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-.++|||+|.+|..+|..|.+ |. +|.|+-|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999999 85 899997753
No 462
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=57.23 E-value=5.5 Score=40.97 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=29.8
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
...+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3569999999999999999999 99999998765
No 463
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=57.11 E-value=5.2 Score=37.98 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=27.0
Q ss_pred EEEECCCCchHHHhhhhcC-CC--eEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQ-NA--SVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~-g~--~VlvlE~G~ 78 (538)
+.|||+|..|..+|..|+. +. .|.++++-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999998 76 899998754
No 464
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=57.02 E-value=5.6 Score=38.56 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 359999999999999999999 99999998765
No 465
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=56.94 E-value=7.9 Score=37.10 Aligned_cols=32 Identities=34% Similarity=0.393 Sum_probs=27.6
Q ss_pred CccEEEECCC-CchHHHhhhhcC-CCeEEEEecc
Q 009272 46 YYDYIVIGGG-TAGCPLAASLSQ-NASVLLLERG 77 (538)
Q Consensus 46 ~~DvIIVGsG-~aG~~~A~~La~-g~~VlvlE~G 77 (538)
.-.++|||+| ..|..+|..|.. |.+|.|+++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4579999999 569999999999 9999988665
No 466
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=56.90 E-value=5 Score=37.27 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999998 88999998764
No 467
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=56.89 E-value=5.9 Score=36.10 Aligned_cols=30 Identities=23% Similarity=0.474 Sum_probs=26.7
Q ss_pred EEEECC-CCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIGG-GTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|.|+ |..|..+|.+|++ |.+|.++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8889999999999 99999998865
No 468
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=56.80 E-value=7.7 Score=36.32 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=26.5
Q ss_pred EEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 49 YIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 49 vIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
+.|||.|..|...|..|++|.+|.++++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLARRFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHTTSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhCCCeEEEEeCCH
Confidence 889999999999999987787899998764
No 469
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=56.79 E-value=13 Score=37.28 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=33.0
Q ss_pred eEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCcCCHHH
Q 009272 226 LTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGALGSPQL 286 (538)
Q Consensus 226 ~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai~tp~l 286 (538)
.+|+++++|++|..+++ . +.+...+|+. + .++.||+|+......+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-----~---~~v~~~~g~~--~-----~ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-----C---YSLELDNGVT--L-----DADSVIVTAPHKAAAGM 293 (470)
T ss_dssp EEEECSCCEEEEEECSS-----S---EEEEESSSCE--E-----EESEEEECSCHHHHHHH
T ss_pred CEEEeCCceEEEEEcCC-----e---EEEEECCCCE--E-----ECCEEEECCCHHHHHHH
Confidence 79999999999998776 3 3344346653 2 36999999987554444
No 470
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=56.65 E-value=6.7 Score=36.17 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
.+.|||.|..|...|..|.+ |.+|.+.++.+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 48999999999999999999 88999988764
No 471
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=56.49 E-value=5.7 Score=35.50 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=26.8
Q ss_pred EEEEC-CCCchHHHhhhhc-C-CCeEEEEeccC
Q 009272 49 YIVIG-GGTAGCPLAASLS-Q-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVG-sG~aG~~~A~~La-~-g~~VlvlE~G~ 78 (538)
++|.| +|..|..+|.+|+ + |.+|.++.|.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 6 99999998764
No 472
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=56.47 E-value=6.6 Score=38.49 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=28.2
Q ss_pred CccEEEECCCCchHHHhhhhcCCCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQNASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~g~~VlvlE~G~ 78 (538)
+.-|+|+|+|..|..+|..|++..+|.+..+..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 445999999999999999999877888886654
No 473
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=56.40 E-value=6.9 Score=37.68 Aligned_cols=32 Identities=22% Similarity=0.028 Sum_probs=27.7
Q ss_pred cEEEECCCCchHH-HhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCP-LAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~-~A~~La~-g~~VlvlE~G~~ 79 (538)
.+.|||-|.+|++ +|..|.+ |.+|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4899999999996 7777877 999999998754
No 474
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=56.39 E-value=6.1 Score=35.82 Aligned_cols=32 Identities=19% Similarity=0.420 Sum_probs=28.0
Q ss_pred cEEEEC-CCCchHHHhhhhcC-C-CeEEEEeccCC
Q 009272 48 DYIVIG-GGTAGCPLAASLSQ-N-ASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVG-sG~aG~~~A~~La~-g-~~VlvlE~G~~ 79 (538)
-++|.| +|..|..+|.+|++ | .+|.++.|.+.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 389999 59999999999999 8 89999988753
No 475
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=56.37 E-value=5.3 Score=39.87 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
--|+|||+|..|..+|..|.. |. +|+++++..
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 359999999999999999988 97 899998764
No 476
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=56.28 E-value=6.5 Score=39.90 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=35.1
Q ss_pred CCeEEEeccEEEEEEecCCCCCCCeEEEEEEEe--------------CCCCeEEEEeccCCCceEEEcCCCcCCH
Q 009272 224 SGLTVLLHASVHKILFRNKGKARPVAHGVVFRD--------------ATDAEHIAYLRNGPKNEIIVSAGALGSP 284 (538)
Q Consensus 224 ~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~--------------~~g~~~~~~~~~~~a~~VVLaaGai~tp 284 (538)
.|+++++++.+.+|.-+ + ++.+|++.+ .+|+..++ +++.||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i-----~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREEL-----PAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEE-----ECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEE-----EcCEEEEccccccCC
Confidence 58999999999998754 2 555666642 12433344 579999999987766
No 477
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=56.16 E-value=4.9 Score=40.40 Aligned_cols=32 Identities=31% Similarity=0.226 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
--++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 359999999999999999988 99999998754
No 478
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=56.13 E-value=5.5 Score=38.39 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=28.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
--+.|||+|..|..+|..|+. +. .|.+++.-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 359999999999999999998 77 999998765
No 479
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=55.85 E-value=5.4 Score=37.58 Aligned_cols=28 Identities=25% Similarity=0.405 Sum_probs=26.0
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEe
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLE 75 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE 75 (538)
.+.|||.|..|...|..|++ |.+|.+++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48999999999999999999 99999887
No 480
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=55.80 E-value=8.5 Score=40.08 Aligned_cols=51 Identities=16% Similarity=0.176 Sum_probs=36.6
Q ss_pred HHhhcCCC-CeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCCc
Q 009272 217 LLEYANPS-GLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGAL 281 (538)
Q Consensus 217 ~l~~~~~~-~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGai 281 (538)
+...+.+. |++++.+ +|++|..++++ .+.+|.+. +|+ ++ .++.||+|+|..
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i-----~ad~vI~A~G~~ 251 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VF-----DADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----ECSEEEECCGGG
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----ECCEEEECCCCc
Confidence 33445555 9999999 99999886553 67777664 454 23 479999999974
No 481
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=55.62 E-value=5.7 Score=38.36 Aligned_cols=31 Identities=23% Similarity=0.223 Sum_probs=27.5
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (538)
--+.|||+|..|..+|..|+. |. .|.++|.-
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 459999999999999999998 76 89999874
No 482
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=55.44 E-value=5.6 Score=40.12 Aligned_cols=34 Identities=12% Similarity=0.323 Sum_probs=24.8
Q ss_pred CCCccEEEECCCCchH-HHhhhhcC--CCeE-EEEecc
Q 009272 44 VSYYDYIVIGGGTAGC-PLAASLSQ--NASV-LLLERG 77 (538)
Q Consensus 44 ~~~~DvIIVGsG~aG~-~~A~~La~--g~~V-lvlE~G 77 (538)
.+...+.|||.|..|. ..+..|.+ +.++ .|.++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 4467899999999996 77777776 5554 566654
No 483
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=54.83 E-value=6.3 Score=40.84 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=29.1
Q ss_pred CccEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
...|+|||.|..|+.+|..|+. |. ++.|++-..
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 4679999999999999999999 84 899998665
No 484
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=54.71 E-value=13 Score=36.89 Aligned_cols=45 Identities=13% Similarity=0.085 Sum_probs=32.0
Q ss_pred hcCCCCeEEEeccEEEEEEecCCCCCCCeEEEEEEEeCCCCeEEEEeccCCCceEEEcCCC
Q 009272 220 YANPSGLTVLLHASVHKILFRNKGKARPVAHGVVFRDATDAEHIAYLRNGPKNEIIVSAGA 280 (538)
Q Consensus 220 ~~~~~~~~i~~~~~V~~I~~~~~~~~~~~~~gV~~~~~~g~~~~~~~~~~~a~~VVLaaGa 280 (538)
.+++.+ +|+++++|++|..+++ .+ .+...+|+.. .++.||+|+|.
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~-----~v---~v~~~~g~~~-------~ad~vi~a~~~ 257 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGD-----VV---NVTVKDGHAF-------QAHSVIVATPM 257 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSS-----SE---EEEETTSCCE-------EEEEEEECSCG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCC-----eE---EEEECCCCEE-------EeCEEEEecCc
Confidence 345567 9999999999998766 33 3333456532 36999999985
No 485
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=54.70 E-value=7.7 Score=37.51 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 49999999999999999999 99999998765
No 486
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=54.51 E-value=6 Score=38.35 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 39999999999999999999 99999887654
No 487
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=54.39 E-value=7.7 Score=37.45 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-+.|||.|..|..+|.+|+. |.+|++.++..
T Consensus 157 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 157 TVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 59999999999999999999 99999998764
No 488
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=54.32 E-value=7.4 Score=37.54 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=27.3
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (538)
--+.|||+|..|..+|..|+. +. .|.++|.-
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 359999999999999999998 75 89999874
No 489
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=54.30 E-value=9.6 Score=39.81 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=30.2
Q ss_pred CccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 46 YYDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 46 ~~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
+-.+||||.|..|..+|..|.+ |.+|+++|..+
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~ 160 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNY 160 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCH
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCH
Confidence 4569999999999999999999 99999999775
No 490
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=53.95 E-value=6.3 Score=40.30 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=29.4
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-++-|||.|..|...|.+|++ |++|.+.++.+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999 99999998875
No 491
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=53.81 E-value=7.2 Score=36.17 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=26.2
Q ss_pred EEEEC---CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 49 YIVIG---GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 49 vIIVG---sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
++|.| +|..|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 88999 47889999999999 99999997754
No 492
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=53.75 E-value=6.3 Score=37.35 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=28.8
Q ss_pred cEEEECC-CCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGG-GTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGs-G~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-|+|.|+ |..|..++.+|.+ |.+|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3999998 9999999999999 999999988764
No 493
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=53.17 E-value=7.7 Score=37.53 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHhhhhcC-CCeEEEEeccCC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NASVLLLERGDS 79 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~~ 79 (538)
-+.|||.|..|..+|.+|.. |.+|++.++.+.
T Consensus 166 ~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 166 RVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 49999999999999999999 999999987653
No 494
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=53.03 E-value=6.7 Score=37.83 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=27.2
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC--eEEEEecc
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA--SVLLLERG 77 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~--~VlvlE~G 77 (538)
--|.|||+|..|..+|..|+. +. .+.++|.-
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 359999999999999999998 75 89999874
No 495
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=53.01 E-value=6.1 Score=40.35 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
..+.|||.|..|...|..|++ |.+|.+.++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 569999999999999999999 99999998754
No 496
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=52.98 E-value=7.2 Score=37.51 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHhhhhcC-CC-eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA-SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~-~VlvlE~G~ 78 (538)
-+.|||+|..|..+|..|+. +. .|.++|.-+
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 49999999999999999988 76 999998765
No 497
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=52.84 E-value=6 Score=39.79 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=26.6
Q ss_pred ccEEEECCCCchHHHhhhhcC-CC---eEEEEe
Q 009272 47 YDYIVIGGGTAGCPLAASLSQ-NA---SVLLLE 75 (538)
Q Consensus 47 ~DvIIVGsG~aG~~~A~~La~-g~---~VlvlE 75 (538)
--++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 359999999999999999999 86 799998
No 498
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=52.74 E-value=6.2 Score=36.21 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHhhhhcC-CC----eEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-NA----SVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g~----~VlvlE~G~ 78 (538)
-+.|||.|..|...|..|.+ |. +|.+.++.+
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 38999999999999999999 87 999998864
No 499
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=52.71 E-value=8 Score=39.58 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=27.6
Q ss_pred cEEEECCCCchHHHhhhhcC-C--CeEEEEeccC
Q 009272 48 DYIVIGGGTAGCPLAASLSQ-N--ASVLLLERGD 78 (538)
Q Consensus 48 DvIIVGsG~aG~~~A~~La~-g--~~VlvlE~G~ 78 (538)
.+.|||.|..|+..|..|++ | .+|.++++.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 59999999999999999998 5 7999998754
No 500
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=52.55 E-value=5.7 Score=34.86 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=26.2
Q ss_pred cEEEEC-CCCchHHHhhhhcC-CCeEEEEeccC
Q 009272 48 DYIVIG-GGTAGCPLAASLSQ-NASVLLLERGD 78 (538)
Q Consensus 48 DvIIVG-sG~aG~~~A~~La~-g~~VlvlE~G~ 78 (538)
-|+|+| +|..|..++..+.. |.+|+++++.+
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 389999 58889999988888 99999998754
Done!