Query 009274
Match_columns 538
No_of_seqs 966 out of 4402
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 22:33:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009274.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009274hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 3E-43 6.5E-48 314.7 27.1 311 211-535 107-479 (480)
2 PLN00181 protein SPA1-RELATED; 100.0 4.2E-40 9.2E-45 355.0 42.8 279 248-536 479-792 (793)
3 KOG0271 Notchless-like WD40 re 100.0 8.9E-42 1.9E-46 305.3 24.3 282 246-538 109-440 (480)
4 KOG0272 U4/U6 small nuclear ri 100.0 1.6E-39 3.4E-44 294.7 23.7 275 250-535 173-458 (459)
5 KOG0272 U4/U6 small nuclear ri 100.0 1.8E-38 3.8E-43 287.9 22.7 267 216-490 172-458 (459)
6 KOG0281 Beta-TrCP (transducin 100.0 2.9E-38 6.4E-43 279.4 17.1 273 251-537 196-477 (499)
7 KOG0285 Pleiotropic regulator 100.0 4.1E-36 8.9E-41 266.9 26.0 281 247-536 146-438 (460)
8 KOG0279 G protein beta subunit 100.0 4.3E-35 9.3E-40 252.5 29.8 286 243-537 6-313 (315)
9 KOG0313 Microtubule binding pr 100.0 2.6E-35 5.7E-40 264.0 27.9 370 130-537 8-418 (423)
10 KOG0286 G-protein beta subunit 100.0 3.2E-34 7E-39 248.6 31.9 279 246-535 49-343 (343)
11 KOG0281 Beta-TrCP (transducin 100.0 1.9E-36 4.1E-41 268.0 15.1 257 229-496 205-481 (499)
12 KOG0315 G-protein beta subunit 100.0 2.6E-33 5.6E-38 237.5 28.6 265 263-537 11-288 (311)
13 KOG0286 G-protein beta subunit 100.0 1.1E-32 2.4E-37 239.0 28.6 263 221-490 57-343 (343)
14 KOG0273 Beta-transducin family 100.0 5.3E-32 1.1E-36 249.1 30.0 299 222-537 181-523 (524)
15 KOG0645 WD40 repeat protein [G 100.0 5.8E-31 1.2E-35 226.2 30.9 289 242-538 4-312 (312)
16 KOG0282 mRNA splicing factor [ 100.0 1E-33 2.3E-38 261.3 14.8 281 242-535 204-503 (503)
17 KOG0279 G protein beta subunit 100.0 5.3E-31 1.2E-35 227.3 30.5 241 243-492 54-313 (315)
18 KOG0295 WD40 repeat-containing 100.0 3.8E-32 8.3E-37 242.5 24.0 280 245-536 101-405 (406)
19 KOG0316 Conserved WD40 repeat- 100.0 1.5E-31 3.2E-36 225.1 25.5 278 242-534 7-296 (307)
20 KOG0263 Transcription initiati 100.0 6.7E-32 1.5E-36 263.9 26.6 231 218-456 377-651 (707)
21 KOG0265 U5 snRNP-specific prot 100.0 2.6E-31 5.7E-36 231.5 26.6 266 219-490 47-336 (338)
22 KOG0284 Polyadenylation factor 100.0 5.9E-33 1.3E-37 251.0 16.9 267 216-491 93-379 (464)
23 KOG0291 WD40-repeat-containing 100.0 5.4E-30 1.2E-34 248.4 36.1 309 218-537 188-550 (893)
24 KOG0284 Polyadenylation factor 100.0 1.5E-32 3.3E-37 248.4 17.3 275 250-536 94-379 (464)
25 KOG0295 WD40 repeat-containing 100.0 3.2E-31 6.9E-36 236.6 23.7 263 221-491 110-405 (406)
26 KOG0319 WD40-repeat-containing 100.0 5.5E-31 1.2E-35 254.9 25.2 263 228-492 333-619 (775)
27 KOG0263 Transcription initiati 100.0 3.2E-31 7E-36 259.2 23.3 250 238-495 364-652 (707)
28 KOG0265 U5 snRNP-specific prot 100.0 2.6E-30 5.7E-35 225.2 25.8 279 242-535 37-336 (338)
29 KOG0319 WD40-repeat-containing 100.0 4E-30 8.7E-35 249.0 28.7 281 245-536 316-618 (775)
30 KOG0296 Angio-associated migra 100.0 1.9E-29 4E-34 225.5 29.6 283 244-537 56-398 (399)
31 KOG0266 WD40 repeat-containing 100.0 1.8E-29 3.8E-34 253.7 32.8 283 246-537 152-454 (456)
32 KOG0274 Cdc4 and related F-box 100.0 5.5E-30 1.2E-34 256.3 28.7 272 251-537 207-482 (537)
33 cd00200 WD40 WD40 domain, foun 100.0 8.5E-29 1.8E-33 235.6 35.6 277 246-535 3-289 (289)
34 KOG0273 Beta-transducin family 100.0 3.5E-29 7.5E-34 230.6 30.8 269 214-492 230-523 (524)
35 KOG0318 WD40 repeat stress pro 100.0 1.1E-28 2.4E-33 230.2 34.3 283 247-538 185-561 (603)
36 KOG0291 WD40-repeat-containing 100.0 3.7E-29 7.9E-34 242.6 31.6 267 221-495 309-615 (893)
37 KOG0315 G-protein beta subunit 100.0 2.9E-28 6.4E-33 207.0 32.4 259 233-501 12-297 (311)
38 KOG0292 Vesicle coat complex C 100.0 6.6E-30 1.4E-34 251.5 25.4 278 248-537 5-321 (1202)
39 KOG0276 Vesicle coat complex C 100.0 2.7E-29 5.9E-34 238.6 28.3 259 222-487 16-294 (794)
40 KOG0274 Cdc4 and related F-box 100.0 4.6E-29 9.9E-34 249.6 28.1 239 248-500 245-490 (537)
41 KOG0293 WD40 repeat-containing 100.0 5E-29 1.1E-33 225.8 25.4 278 246-537 218-513 (519)
42 PLN00181 protein SPA1-RELATED; 100.0 4.2E-28 9.2E-33 262.0 37.5 265 219-491 483-792 (793)
43 KOG0276 Vesicle coat complex C 100.0 3.6E-29 7.7E-34 237.8 25.2 274 247-533 8-295 (794)
44 KOG0266 WD40 repeat-containing 100.0 1.5E-28 3.3E-33 247.0 30.6 268 219-492 159-454 (456)
45 KOG1407 WD40 repeat protein [F 100.0 1.6E-28 3.6E-33 209.9 23.8 278 246-538 14-312 (313)
46 KOG0645 WD40 repeat protein [G 100.0 1.6E-27 3.4E-32 205.1 29.0 260 222-492 17-311 (312)
47 KOG0268 Sof1-like rRNA process 100.0 1.2E-29 2.6E-34 226.4 16.1 273 245-536 59-344 (433)
48 KOG0318 WD40 repeat stress pro 100.0 1.8E-26 3.9E-31 215.5 36.2 306 218-536 58-391 (603)
49 KOG0277 Peroxisomal targeting 100.0 8.2E-28 1.8E-32 204.9 23.4 267 256-535 12-307 (311)
50 KOG0293 WD40 repeat-containing 100.0 3.9E-28 8.4E-33 220.1 22.8 269 219-494 224-515 (519)
51 KOG0316 Conserved WD40 repeat- 100.0 2.8E-27 6E-32 199.4 24.1 261 221-490 19-297 (307)
52 KOG0282 mRNA splicing factor [ 100.0 2E-28 4.4E-33 226.5 18.0 263 222-490 217-503 (503)
53 KOG0285 Pleiotropic regulator 100.0 1.2E-27 2.7E-32 213.1 22.0 264 220-493 152-440 (460)
54 KOG0313 Microtubule binding pr 100.0 6.3E-27 1.4E-31 210.3 26.5 254 231-492 115-418 (423)
55 KOG0278 Serine/threonine kinas 100.0 7.1E-28 1.5E-32 204.7 18.4 277 247-537 9-297 (334)
56 KOG0292 Vesicle coat complex C 100.0 1.2E-26 2.7E-31 228.6 29.6 265 222-495 12-324 (1202)
57 KOG0301 Phospholipase A2-activ 100.0 6.6E-27 1.4E-31 225.3 26.9 273 245-537 7-288 (745)
58 cd00200 WD40 WD40 domain, foun 100.0 7.2E-26 1.6E-30 215.4 33.9 263 220-490 10-289 (289)
59 KOG0306 WD40-repeat-containing 100.0 1E-25 2.3E-30 218.7 32.1 306 220-537 66-538 (888)
60 KOG0294 WD40 repeat-containing 100.0 2.2E-26 4.8E-31 202.1 24.6 239 243-537 34-281 (362)
61 KOG0296 Angio-associated migra 100.0 6.7E-26 1.5E-30 202.8 27.4 262 221-492 66-398 (399)
62 KOG0277 Peroxisomal targeting 100.0 7.6E-27 1.6E-31 199.0 20.4 234 251-491 59-308 (311)
63 KOG0643 Translation initiation 100.0 2.6E-26 5.7E-31 197.1 23.1 240 247-494 5-319 (327)
64 KOG0640 mRNA cleavage stimulat 100.0 1E-26 2.2E-31 203.6 20.9 282 246-535 106-424 (430)
65 KOG0275 Conserved WD40 repeat- 100.0 2.2E-27 4.7E-32 208.9 16.8 263 221-490 215-507 (508)
66 KOG0275 Conserved WD40 repeat- 100.0 1.5E-27 3.3E-32 209.8 15.5 277 250-535 211-507 (508)
67 KOG0300 WD40 repeat-containing 100.0 3.7E-26 7.9E-31 200.6 22.7 299 232-538 125-477 (481)
68 KOG0278 Serine/threonine kinas 99.9 3.5E-27 7.5E-32 200.5 15.2 257 229-495 27-300 (334)
69 KOG0306 WD40-repeat-containing 99.9 2.5E-25 5.3E-30 216.1 27.8 277 246-536 367-663 (888)
70 PTZ00421 coronin; Provisional 99.9 1.4E-24 3E-29 217.4 33.4 242 247-494 70-333 (493)
71 PTZ00421 coronin; Provisional 99.9 3.2E-24 6.9E-29 214.8 35.4 235 262-499 32-297 (493)
72 KOG0283 WD40 repeat-containing 99.9 7.9E-26 1.7E-30 223.5 23.3 280 246-536 260-575 (712)
73 KOG0283 WD40 repeat-containing 99.9 1.3E-25 2.8E-30 222.0 24.3 230 217-453 265-575 (712)
74 KOG0288 WD40 repeat protein Ti 99.9 2E-26 4.4E-31 209.1 16.6 261 220-490 176-459 (459)
75 KOG0308 Conserved WD40 repeat- 99.9 5.5E-26 1.2E-30 217.3 20.1 261 229-492 35-327 (735)
76 PTZ00420 coronin; Provisional 99.9 5.9E-24 1.3E-28 213.7 35.7 226 268-496 50-297 (568)
77 KOG0310 Conserved WD40 repeat- 99.9 6.7E-25 1.5E-29 203.7 24.4 266 252-533 26-305 (487)
78 KOG0289 mRNA splicing factor [ 99.9 1.5E-24 3.2E-29 198.3 25.8 242 245-491 254-505 (506)
79 KOG0299 U3 snoRNP-associated p 99.9 6.4E-25 1.4E-29 202.2 22.4 251 285-538 135-411 (479)
80 KOG0301 Phospholipase A2-activ 99.9 1.2E-24 2.6E-29 209.8 24.8 248 230-493 24-289 (745)
81 PTZ00420 coronin; Provisional 99.9 8.5E-24 1.8E-28 212.5 31.6 223 244-472 66-314 (568)
82 KOG0973 Histone transcription 99.9 3.4E-24 7.3E-29 217.3 27.8 282 251-538 12-356 (942)
83 KOG0641 WD40 repeat protein [G 99.9 8E-23 1.7E-27 171.5 31.2 285 250-537 30-349 (350)
84 KOG0305 Anaphase promoting com 99.9 4.1E-24 8.9E-29 206.2 27.1 234 251-494 216-463 (484)
85 KOG0772 Uncharacterized conser 99.9 1.5E-24 3.3E-29 202.2 22.3 272 219-490 167-485 (641)
86 KOG0288 WD40 repeat protein Ti 99.9 2.3E-25 4.9E-30 202.4 16.4 278 245-535 168-459 (459)
87 KOG1446 Histone H3 (Lys4) meth 99.9 6.9E-23 1.5E-27 180.9 30.6 278 248-536 10-302 (311)
88 KOG0647 mRNA export protein (c 99.9 9.5E-24 2.1E-28 184.6 24.5 261 251-523 26-308 (347)
89 KOG1036 Mitotic spindle checkp 99.9 2.1E-23 4.5E-28 183.3 25.8 261 252-527 13-294 (323)
90 KOG1539 WD repeat protein [Gen 99.9 8.3E-23 1.8E-27 201.0 32.4 311 216-535 166-646 (910)
91 KOG1446 Histone H3 (Lys4) meth 99.9 2E-22 4.3E-27 178.0 31.4 270 218-495 13-306 (311)
92 KOG0647 mRNA export protein (c 99.9 4.7E-23 1E-27 180.3 26.9 257 215-480 23-311 (347)
93 KOG0264 Nucleosome remodeling 99.9 7.4E-24 1.6E-28 195.4 22.8 253 238-494 110-406 (422)
94 KOG0308 Conserved WD40 repeat- 99.9 1.9E-24 4.1E-29 206.9 18.0 275 250-536 19-326 (735)
95 KOG4283 Transcription-coupled 99.9 2.6E-23 5.7E-28 181.1 22.7 276 249-536 40-364 (397)
96 KOG0772 Uncharacterized conser 99.9 2.2E-23 4.8E-28 194.4 23.5 285 246-535 161-485 (641)
97 KOG0639 Transducin-like enhanc 99.9 9.4E-24 2E-28 196.2 20.2 274 250-536 417-703 (705)
98 KOG0641 WD40 repeat protein [G 99.9 1.6E-21 3.4E-26 163.8 30.1 264 221-492 34-349 (350)
99 KOG0310 Conserved WD40 repeat- 99.9 1.7E-22 3.8E-27 187.7 26.0 238 248-494 64-311 (487)
100 KOG0289 mRNA splicing factor [ 99.9 2.1E-22 4.5E-27 184.3 25.3 273 253-536 220-505 (506)
101 KOG1332 Vesicle coat complex C 99.9 3.1E-23 6.7E-28 176.1 17.9 239 248-536 7-285 (299)
102 KOG0300 WD40 repeat-containing 99.9 8.9E-23 1.9E-27 179.5 21.2 242 244-494 182-478 (481)
103 KOG0299 U3 snoRNP-associated p 99.9 2.6E-22 5.6E-27 185.2 24.2 231 250-490 200-454 (479)
104 KOG0640 mRNA cleavage stimulat 99.9 5E-23 1.1E-27 180.5 18.5 269 220-491 113-425 (430)
105 KOG0264 Nucleosome remodeling 99.9 9.7E-23 2.1E-27 188.0 21.2 241 290-537 122-404 (422)
106 KOG2055 WD40 repeat protein [G 99.9 4.4E-22 9.5E-27 183.6 25.3 293 239-537 194-512 (514)
107 KOG0643 Translation initiation 99.9 7E-22 1.5E-26 170.1 24.3 227 222-452 13-315 (327)
108 KOG0321 WD40 repeat-containing 99.9 2.5E-22 5.4E-27 192.1 23.7 263 232-494 65-393 (720)
109 KOG1408 WD40 repeat protein [F 99.9 9.4E-22 2E-26 190.2 26.5 305 228-537 267-713 (1080)
110 KOG1036 Mitotic spindle checkp 99.9 3.7E-21 8E-26 169.2 27.8 257 216-482 10-294 (323)
111 KOG1332 Vesicle coat complex C 99.9 1.3E-22 2.8E-27 172.4 18.0 222 228-452 20-284 (299)
112 KOG0305 Anaphase promoting com 99.9 1.2E-21 2.7E-26 189.1 26.9 265 258-537 183-461 (484)
113 KOG0269 WD40 repeat-containing 99.9 1.9E-23 4.2E-28 203.9 14.6 232 255-492 90-340 (839)
114 KOG1407 WD40 repeat protein [F 99.9 3.8E-21 8.2E-26 165.1 25.8 251 222-483 23-293 (313)
115 KOG0270 WD40 repeat-containing 99.9 1.9E-22 4.1E-27 185.3 18.9 220 230-454 191-449 (463)
116 KOG0294 WD40 repeat-containing 99.9 1.4E-21 2.9E-26 172.2 21.9 219 227-455 49-282 (362)
117 KOG2096 WD40 repeat protein [G 99.9 4.9E-21 1.1E-25 168.8 24.9 283 245-535 79-400 (420)
118 KOG0646 WD40 repeat protein [G 99.9 6.4E-22 1.4E-26 183.0 20.1 208 252-501 81-316 (476)
119 KOG2106 Uncharacterized conser 99.9 6E-20 1.3E-24 171.3 31.9 308 219-537 104-477 (626)
120 KOG1274 WD40 repeat protein [G 99.9 2.3E-20 5E-25 186.0 29.0 237 249-493 10-263 (933)
121 KOG4328 WD40 protein [Function 99.9 9.9E-21 2.2E-25 174.6 23.4 282 248-536 182-494 (498)
122 KOG0973 Histone transcription 99.9 1.8E-20 4E-25 190.5 26.3 271 217-495 11-358 (942)
123 KOG0321 WD40 repeat-containing 99.9 7.1E-21 1.5E-25 182.3 21.9 268 262-537 64-391 (720)
124 KOG0269 WD40 repeat-containing 99.9 2.2E-21 4.8E-26 189.6 18.7 271 255-533 42-336 (839)
125 KOG2445 Nuclear pore complex c 99.9 5.6E-20 1.2E-24 161.5 24.0 239 249-492 10-318 (361)
126 KOG2048 WD40 repeat protein [G 99.9 2.2E-19 4.8E-24 173.4 30.3 306 221-537 27-361 (691)
127 KOG1273 WD40 repeat protein [G 99.9 4.4E-20 9.5E-25 162.6 22.5 269 222-493 26-323 (405)
128 KOG0650 WD40 repeat nucleolar 99.9 3.1E-20 6.7E-25 176.6 23.2 285 246-534 394-732 (733)
129 KOG1408 WD40 repeat protein [F 99.9 2.4E-20 5.3E-25 180.5 22.7 235 253-492 460-713 (1080)
130 KOG0268 Sof1-like rRNA process 99.9 4.3E-21 9.4E-26 171.9 15.5 214 232-452 80-343 (433)
131 KOG2048 WD40 repeat protein [G 99.9 8.7E-19 1.9E-23 169.4 31.4 276 250-535 23-317 (691)
132 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 9.5E-19 2.1E-23 168.3 32.1 261 262-538 1-280 (300)
133 KOG0267 Microtubule severing p 99.9 8.2E-22 1.8E-26 191.2 8.2 207 232-446 41-260 (825)
134 KOG0646 WD40 repeat protein [G 99.9 1.5E-19 3.2E-24 167.4 22.4 264 267-537 12-307 (476)
135 KOG0270 WD40 repeat-containing 99.9 5.1E-20 1.1E-24 169.5 19.1 236 296-537 177-449 (463)
136 KOG1034 Transcriptional repres 99.9 2.5E-19 5.4E-24 158.9 22.3 282 248-536 34-382 (385)
137 KOG2096 WD40 repeat protein [G 99.8 3E-19 6.4E-24 157.6 22.2 246 286-536 80-359 (420)
138 KOG0267 Microtubule severing p 99.8 3.3E-21 7.1E-26 187.0 10.3 234 240-527 13-257 (825)
139 KOG1063 RNA polymerase II elon 99.8 8E-19 1.7E-23 169.9 25.7 283 249-537 264-699 (764)
140 KOG1034 Transcriptional repres 99.8 1.7E-19 3.6E-24 159.9 19.1 241 250-492 87-383 (385)
141 KOG2106 Uncharacterized conser 99.8 6E-17 1.3E-21 151.5 35.0 297 221-535 202-519 (626)
142 KOG4283 Transcription-coupled 99.8 8.2E-19 1.8E-23 153.2 21.2 204 289-495 40-279 (397)
143 KOG0302 Ribosome Assembly prot 99.8 7.7E-19 1.7E-23 158.4 21.3 232 249-485 148-432 (440)
144 KOG1188 WD40 repeat protein [G 99.8 3.6E-19 7.9E-24 158.7 19.0 265 263-536 41-345 (376)
145 KOG4378 Nuclear protein COP1 [ 99.8 2.9E-19 6.3E-24 166.4 19.0 209 256-472 83-301 (673)
146 KOG1539 WD repeat protein [Gen 99.8 3.2E-17 6.9E-22 162.1 34.2 277 255-537 162-606 (910)
147 KOG2445 Nuclear pore complex c 99.8 3.1E-18 6.7E-23 150.7 24.1 244 289-536 10-317 (361)
148 KOG1274 WD40 repeat protein [G 99.8 3.2E-18 6.9E-23 170.9 27.3 260 222-489 16-297 (933)
149 KOG0302 Ribosome Assembly prot 99.8 1.8E-19 3.9E-24 162.5 16.3 159 248-411 207-379 (440)
150 KOG4378 Nuclear protein COP1 [ 99.8 8.6E-19 1.9E-23 163.2 20.0 256 271-537 11-280 (673)
151 KOG1063 RNA polymerase II elon 99.8 3.4E-18 7.3E-23 165.6 24.5 304 229-537 31-437 (764)
152 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 5.2E-17 1.1E-21 156.2 32.8 248 244-501 23-288 (300)
153 KOG1273 WD40 repeat protein [G 99.8 6.4E-18 1.4E-22 149.1 23.3 268 255-536 26-321 (405)
154 KOG0639 Transducin-like enhanc 99.8 4.5E-19 9.8E-24 165.3 17.0 237 290-536 417-662 (705)
155 KOG0649 WD40 repeat protein [G 99.8 2.6E-17 5.7E-22 140.1 25.6 234 255-494 13-276 (325)
156 KOG0322 G-protein beta subunit 99.8 1.1E-18 2.4E-23 150.2 15.9 244 244-491 6-322 (323)
157 KOG0307 Vesicle coat complex C 99.8 3.6E-19 7.8E-24 181.9 15.2 260 269-536 36-326 (1049)
158 KOG0307 Vesicle coat complex C 99.8 6.9E-19 1.5E-23 179.9 16.1 236 253-495 65-330 (1049)
159 KOG0303 Actin-binding protein 99.8 7.6E-18 1.6E-22 152.9 18.2 200 248-454 77-294 (472)
160 KOG0290 Conserved WD40 repeat- 99.8 1.5E-16 3.2E-21 139.0 23.6 289 243-534 36-362 (364)
161 KOG2919 Guanine nucleotide-bin 99.8 2.4E-16 5.2E-21 139.7 22.8 236 255-493 52-328 (406)
162 KOG4328 WD40 protein [Function 99.7 1.4E-16 3E-21 147.5 19.6 255 277-535 171-448 (498)
163 KOG1517 Guanine nucleotide bin 99.7 5.6E-16 1.2E-20 156.9 25.1 287 250-537 1062-1381(1387)
164 KOG0303 Actin-binding protein 99.7 1.8E-16 3.8E-21 144.2 19.4 205 287-495 76-297 (472)
165 COG2319 FOG: WD40 repeat [Gene 99.7 3.1E-14 6.7E-19 143.5 37.6 281 247-537 60-359 (466)
166 KOG0642 Cell-cycle nuclear pro 99.7 5.5E-17 1.2E-21 154.0 16.0 247 247-497 289-566 (577)
167 KOG1007 WD repeat protein TSSC 99.7 2.7E-16 5.8E-21 137.4 18.8 243 246-493 57-362 (370)
168 KOG0591 NIMA (never in mitosis 99.7 2.2E-18 4.8E-23 150.9 5.0 113 10-158 163-278 (375)
169 COG2319 FOG: WD40 repeat [Gene 99.7 2.9E-13 6.4E-18 136.3 40.7 285 242-537 145-442 (466)
170 KOG1334 WD40 repeat protein [G 99.7 8E-17 1.7E-21 150.2 13.1 283 246-535 136-464 (559)
171 KOG2055 WD40 repeat protein [G 99.7 4.4E-15 9.6E-20 137.8 24.0 268 215-492 209-512 (514)
172 KOG1009 Chromatin assembly com 99.7 4.5E-15 9.8E-20 135.7 23.4 278 252-537 13-372 (434)
173 KOG1240 Protein kinase contain 99.7 5.5E-15 1.2E-19 152.2 26.3 253 240-494 1036-1336(1431)
174 KOG1538 Uncharacterized conser 99.7 1.3E-15 2.9E-20 147.0 20.5 247 229-492 31-293 (1081)
175 KOG2919 Guanine nucleotide-bin 99.7 5.7E-15 1.2E-19 131.1 22.8 256 225-482 55-360 (406)
176 KOG1007 WD repeat protein TSSC 99.7 4.9E-15 1.1E-19 129.6 21.8 264 270-536 38-360 (370)
177 KOG1188 WD40 repeat protein [G 99.7 2E-15 4.3E-20 135.1 19.5 257 232-492 41-346 (376)
178 KOG4227 WD40 repeat protein [G 99.7 1.8E-15 3.8E-20 137.4 19.5 288 244-535 48-385 (609)
179 KOG2110 Uncharacterized conser 99.7 1E-13 2.2E-18 125.6 30.0 196 253-457 47-251 (391)
180 KOG1587 Cytoplasmic dynein int 99.7 1.6E-14 3.5E-19 144.2 26.0 261 271-537 221-516 (555)
181 KOG0644 Uncharacterized conser 99.7 6.6E-17 1.4E-21 159.7 7.8 269 247-537 185-468 (1113)
182 KOG1963 WD40 repeat protein [G 99.7 6.7E-14 1.4E-18 140.1 27.6 283 249-538 202-539 (792)
183 KOG0650 WD40 repeat nucleolar 99.6 3.3E-14 7.1E-19 136.1 22.2 261 220-489 401-732 (733)
184 KOG0649 WD40 repeat protein [G 99.6 6E-14 1.3E-18 119.9 21.0 194 254-452 116-314 (325)
185 KOG0201 Serine/threonine prote 99.6 1.4E-16 3E-21 148.4 5.5 112 12-161 148-263 (467)
186 KOG1445 Tumor-specific antigen 99.6 2.1E-15 4.6E-20 144.8 13.7 221 311-536 599-843 (1012)
187 KOG1538 Uncharacterized conser 99.6 2.2E-14 4.7E-19 138.7 20.3 264 254-536 14-292 (1081)
188 KOG0644 Uncharacterized conser 99.6 7.9E-16 1.7E-20 152.1 10.7 226 222-454 193-468 (1113)
189 KOG0596 Dual specificity; seri 99.6 1.7E-16 3.8E-21 151.5 5.7 129 9-160 493-626 (677)
190 KOG1240 Protein kinase contain 99.6 4.3E-14 9.2E-19 145.7 22.9 260 277-537 1034-1334(1431)
191 KOG0642 Cell-cycle nuclear pro 99.6 8.5E-15 1.8E-19 139.3 16.2 234 224-464 299-573 (577)
192 PRK11028 6-phosphogluconolacto 99.6 6.1E-13 1.3E-17 129.6 29.3 265 265-537 5-304 (330)
193 KOG1963 WD40 repeat protein [G 99.6 2.5E-13 5.4E-18 136.1 25.8 312 222-537 208-583 (792)
194 KOG1587 Cytoplasmic dynein int 99.6 9.7E-14 2.1E-18 138.7 23.0 240 252-494 242-518 (555)
195 KOG0615 Serine/threonine prote 99.6 1.8E-16 3.9E-21 146.3 2.7 116 13-160 317-436 (475)
196 KOG0575 Polo-like serine/threo 99.6 3E-16 6.5E-21 152.2 4.0 109 14-161 157-269 (592)
197 KOG1517 Guanine nucleotide bin 99.6 1.6E-13 3.5E-18 139.4 22.7 241 294-537 1066-1333(1387)
198 KOG0598 Ribosomal protein S6 k 99.6 4.8E-16 1E-20 142.3 3.7 100 18-154 170-270 (357)
199 KOG2110 Uncharacterized conser 99.6 2.6E-12 5.6E-17 116.6 25.5 232 293-538 6-249 (391)
200 KOG0581 Mitogen-activated prot 99.6 1.2E-15 2.6E-20 139.7 4.3 114 12-160 216-334 (364)
201 KOG0198 MEKK and related serin 99.6 6.6E-16 1.4E-20 143.8 2.1 117 11-161 154-276 (313)
202 TIGR03300 assembly_YfgL outer 99.6 1.4E-11 3.1E-16 122.3 33.1 279 241-534 84-376 (377)
203 KOG0290 Conserved WD40 repeat- 99.6 2.1E-13 4.6E-18 119.6 17.1 188 250-444 148-356 (364)
204 KOG4227 WD40 repeat protein [G 99.6 8.3E-13 1.8E-17 120.3 21.1 268 220-492 57-387 (609)
205 KOG1445 Tumor-specific antigen 99.5 1.1E-13 2.4E-18 133.2 15.5 231 261-495 590-847 (1012)
206 KOG1310 WD40 repeat protein [G 99.5 1E-13 2.3E-18 131.4 14.4 163 246-410 44-231 (758)
207 smart00750 KIND kinase non-cat 99.5 2.5E-15 5.3E-20 132.3 3.0 118 13-165 49-169 (176)
208 KOG0595 Serine/threonine-prote 99.5 2.4E-15 5.3E-20 139.1 2.6 69 12-98 152-223 (429)
209 KOG1523 Actin-related protein 99.5 2E-12 4.3E-17 115.2 20.1 231 247-483 5-269 (361)
210 KOG0771 Prolactin regulatory e 99.5 2.8E-13 6E-18 125.0 15.0 191 256-452 148-352 (398)
211 KOG1009 Chromatin assembly com 99.5 1.6E-12 3.5E-17 119.2 19.7 233 218-452 12-370 (434)
212 KOG0597 Serine-threonine prote 99.5 2.9E-15 6.2E-20 143.6 1.7 111 11-159 136-249 (808)
213 KOG0192 Tyrosine kinase specif 99.5 8.3E-15 1.8E-19 140.9 4.5 119 13-166 182-304 (362)
214 KOG0033 Ca2+/calmodulin-depend 99.5 5.7E-15 1.2E-19 127.1 2.9 111 14-159 152-265 (355)
215 KOG0694 Serine/threonine prote 99.5 9.7E-15 2.1E-19 143.7 3.8 106 11-155 504-613 (694)
216 KOG0589 Serine/threonine prote 99.5 2.2E-14 4.8E-19 137.2 5.9 111 13-161 144-258 (426)
217 KOG0605 NDR and related serine 99.5 1.4E-14 3E-19 138.6 4.0 89 34-155 347-436 (550)
218 KOG2111 Uncharacterized conser 99.5 3.1E-11 6.7E-16 107.6 24.7 174 272-455 75-257 (346)
219 TIGR03300 assembly_YfgL outer 99.5 6.5E-11 1.4E-15 117.6 30.3 266 258-537 61-338 (377)
220 PRK11028 6-phosphogluconolacto 99.5 2.3E-10 5E-15 111.5 33.6 237 251-492 33-304 (330)
221 KOG0322 G-protein beta subunit 99.5 2.9E-13 6.3E-18 117.1 11.3 157 251-409 149-322 (323)
222 KOG1524 WD40 repeat-containing 99.5 4.2E-12 9.2E-17 120.3 19.6 257 250-533 12-282 (737)
223 KOG0280 Uncharacterized conser 99.5 1.6E-11 3.4E-16 108.3 21.2 265 270-535 44-331 (339)
224 KOG0771 Prolactin regulatory e 99.5 1.3E-11 2.9E-16 114.1 21.6 188 344-536 148-353 (398)
225 KOG1334 WD40 repeat protein [G 99.5 1.5E-12 3.2E-17 122.1 15.4 283 212-494 135-468 (559)
226 KOG1524 WD40 repeat-containing 99.5 1.5E-12 3.3E-17 123.2 15.1 196 232-450 76-282 (737)
227 PHA02988 hypothetical protein; 99.5 1.9E-14 4.2E-19 136.9 2.2 117 11-165 159-279 (283)
228 KOG0582 Ste20-like serine/thre 99.5 2.1E-14 4.6E-19 134.2 2.2 112 25-161 181-293 (516)
229 KOG1272 WD40-repeat-containing 99.4 2.3E-13 4.9E-18 126.7 8.5 223 295-535 132-360 (545)
230 KOG0578 p21-activated serine/t 99.4 3.1E-14 6.8E-19 137.2 2.9 113 14-161 408-523 (550)
231 KOG2394 WD40 protein DMR-N9 [G 99.4 4.1E-12 8.9E-17 120.5 16.3 192 262-474 185-384 (636)
232 KOG3881 Uncharacterized conser 99.4 4.3E-11 9.4E-16 109.5 19.6 242 252-500 55-328 (412)
233 KOG0592 3-phosphoinositide-dep 99.4 1.9E-13 4.1E-18 131.0 4.5 91 33-160 245-337 (604)
234 KOG4279 Serine/threonine prote 99.4 1.2E-13 2.6E-18 135.6 3.2 115 11-160 712-831 (1226)
235 KOG2394 WD40 protein DMR-N9 [G 99.4 1.1E-11 2.4E-16 117.7 16.0 162 224-391 178-383 (636)
236 PRK01742 tolB translocation pr 99.4 9.2E-11 2E-15 118.0 23.9 210 246-472 197-423 (429)
237 KOG0583 Serine/threonine prote 99.4 1.4E-13 3.1E-18 133.7 3.5 110 12-160 158-274 (370)
238 KOG1523 Actin-related protein 99.4 1.1E-10 2.4E-15 104.1 21.2 205 287-495 5-239 (361)
239 KOG3881 Uncharacterized conser 99.4 4.1E-11 8.8E-16 109.7 18.9 206 248-455 101-321 (412)
240 KOG2111 Uncharacterized conser 99.4 4.3E-10 9.3E-15 100.5 24.7 232 294-537 7-256 (346)
241 PRK01742 tolB translocation pr 99.4 2.7E-11 5.9E-16 121.9 19.7 207 271-491 183-400 (429)
242 KOG4721 Serine/threonine prote 99.4 3E-13 6.5E-18 130.0 5.2 114 11-161 248-364 (904)
243 KOG0574 STE20-like serine/thre 99.4 1.9E-13 4.2E-18 121.2 3.2 115 10-160 164-282 (502)
244 cd05102 PTKc_VEGFR3 Catalytic 99.4 6.8E-13 1.5E-17 129.9 7.4 122 11-166 210-335 (338)
245 KOG0588 Serine/threonine prote 99.4 1.2E-13 2.7E-18 135.2 2.1 110 14-161 151-263 (786)
246 KOG1272 WD40-repeat-containing 99.4 1.4E-12 3E-17 121.6 8.5 224 255-490 132-360 (545)
247 KOG0616 cAMP-dependent protein 99.4 2.6E-13 5.5E-18 120.4 3.4 101 13-154 182-285 (355)
248 cd05631 STKc_GRK4 Catalytic do 99.4 3.4E-13 7.4E-18 128.6 4.5 109 12-155 139-250 (285)
249 PTZ00283 serine/threonine prot 99.4 3.2E-13 6.9E-18 138.1 4.5 115 11-160 179-296 (496)
250 cd05048 PTKc_Ror Catalytic Dom 99.4 5.1E-13 1.1E-17 127.4 5.2 118 12-164 161-282 (283)
251 KOG1187 Serine/threonine prote 99.4 5.2E-13 1.1E-17 129.4 5.3 130 11-165 213-352 (361)
252 KOG0193 Serine/threonine prote 99.4 5E-13 1.1E-17 129.8 4.9 108 32-167 547-655 (678)
253 PRK11138 outer membrane biogen 99.4 3.9E-09 8.5E-14 105.3 33.0 264 258-536 116-393 (394)
254 cd05585 STKc_YPK1_like Catalyt 99.4 4.3E-13 9.2E-18 129.7 4.5 114 12-163 130-246 (312)
255 KOG0585 Ca2+/calmodulin-depend 99.4 2.8E-13 6.1E-18 127.7 2.8 116 12-160 247-371 (576)
256 cd05602 STKc_SGK1 Catalytic do 99.4 6.3E-13 1.4E-17 129.3 5.2 111 11-159 132-245 (325)
257 cd05571 STKc_PKB Catalytic dom 99.3 4.7E-13 1E-17 130.0 4.2 106 11-154 131-239 (323)
258 KOG0599 Phosphorylase kinase g 99.3 1.7E-13 3.8E-18 119.9 0.4 114 18-160 168-282 (411)
259 KOG2321 WD40 repeat protein [G 99.3 3.9E-10 8.5E-15 108.1 22.8 270 250-536 49-342 (703)
260 cd05575 STKc_SGK Catalytic dom 99.3 7E-13 1.5E-17 128.8 4.6 110 11-158 132-244 (323)
261 KOG4645 MAPKKK (MAP kinase kin 99.3 2.6E-13 5.6E-18 142.3 1.2 120 10-160 1369-1493(1509)
262 cd05054 PTKc_VEGFR Catalytic d 99.3 6.1E-13 1.3E-17 129.8 3.7 122 12-167 210-335 (337)
263 PTZ00267 NIMA-related protein 99.3 8.2E-13 1.8E-17 135.0 4.6 115 11-160 205-322 (478)
264 cd05616 STKc_cPKC_beta Catalyt 99.3 9.5E-13 2E-17 127.9 4.5 105 12-155 138-246 (323)
265 PTZ00263 protein kinase A cata 99.3 8.9E-13 1.9E-17 128.4 4.3 103 11-155 154-260 (329)
266 cd05094 PTKc_TrkC Catalytic do 99.3 1.3E-12 2.7E-17 125.1 5.2 119 12-166 160-283 (291)
267 cd05091 PTKc_Ror2 Catalytic do 99.3 1.5E-12 3.3E-17 124.1 5.6 116 12-163 161-281 (283)
268 cd05106 PTKc_CSF-1R Catalytic 99.3 2.5E-12 5.4E-17 127.3 7.3 120 12-166 249-373 (374)
269 cd05603 STKc_SGK2 Catalytic do 99.3 1.1E-12 2.4E-17 127.3 4.8 108 11-156 132-242 (321)
270 cd07848 STKc_CDKL5 Catalytic d 99.3 9E-13 1.9E-17 125.9 4.0 66 12-93 137-205 (287)
271 cd05590 STKc_nPKC_eta Catalyti 99.3 1.1E-12 2.4E-17 127.2 4.4 108 12-157 133-243 (320)
272 cd05620 STKc_nPKC_delta Cataly 99.3 1.5E-12 3.2E-17 126.0 5.1 107 12-156 133-242 (316)
273 cd05612 STKc_PRKX_like Catalyt 99.3 1.3E-12 2.7E-17 125.0 4.5 101 12-154 138-242 (291)
274 cd05614 STKc_MSK2_N N-terminal 99.3 1.5E-12 3.2E-17 127.2 4.7 113 12-156 142-257 (332)
275 KOG1310 WD40 repeat protein [G 99.3 3.1E-11 6.7E-16 114.9 13.3 165 285-454 43-231 (758)
276 cd05594 STKc_PKB_alpha Catalyt 99.3 9E-13 1.9E-17 128.2 3.2 106 11-154 132-240 (325)
277 cd05593 STKc_PKB_gamma Catalyt 99.3 1.3E-12 2.7E-17 127.2 4.2 106 11-154 131-239 (328)
278 cd05589 STKc_PKN Catalytic dom 99.3 1.4E-12 3.1E-17 126.7 4.6 106 12-156 138-247 (324)
279 cd07862 STKc_CDK6 Catalytic do 99.3 1.2E-12 2.7E-17 125.1 4.0 125 12-160 147-286 (290)
280 cd05093 PTKc_TrkB Catalytic do 99.3 2E-12 4.4E-17 123.5 5.3 120 11-166 156-280 (288)
281 cd05592 STKc_nPKC_theta_delta 99.3 1.6E-12 3.5E-17 125.7 4.7 107 12-156 133-242 (316)
282 KOG4547 WD40 repeat-containing 99.3 4.3E-10 9.4E-15 108.6 20.9 200 262-493 5-221 (541)
283 PTZ00266 NIMA-related protein 99.3 1.6E-12 3.5E-17 138.0 4.9 112 12-160 179-294 (1021)
284 cd05111 PTK_HER3 Pseudokinase 99.3 2.8E-12 6E-17 121.9 5.9 122 12-168 146-271 (279)
285 PTZ00426 cAMP-dependent protei 99.3 1.6E-12 3.5E-17 126.9 4.2 103 11-154 167-272 (340)
286 cd05582 STKc_RSK_N N-terminal 99.3 1.3E-12 2.8E-17 126.8 3.4 108 12-157 135-245 (318)
287 KOG0032 Ca2+/calmodulin-depend 99.3 1.4E-12 3E-17 126.7 3.6 115 11-160 175-292 (382)
288 cd05049 PTKc_Trk Catalytic dom 99.3 2.3E-12 5E-17 122.6 4.9 116 12-163 159-279 (280)
289 cd05604 STKc_SGK3 Catalytic do 99.3 2.1E-12 4.5E-17 125.6 4.6 108 12-157 133-243 (325)
290 KOG2139 WD40 repeat protein [G 99.3 4.8E-09 1E-13 95.4 25.4 185 253-443 99-299 (445)
291 cd07868 STKc_CDK8 Catalytic do 99.3 4.9E-12 1.1E-16 122.7 7.0 68 11-92 148-219 (317)
292 cd05591 STKc_nPKC_epsilon Cata 99.3 2.1E-12 4.7E-17 125.3 4.5 107 11-156 132-242 (321)
293 cd05584 STKc_p70S6K Catalytic 99.3 2E-12 4.4E-17 125.6 4.2 106 11-154 136-244 (323)
294 cd07867 STKc_CDC2L6 Catalytic 99.3 2.7E-12 5.9E-17 124.5 5.1 77 2-92 139-219 (317)
295 cd05619 STKc_nPKC_theta Cataly 99.3 2.8E-12 6E-17 124.1 5.0 107 12-156 133-242 (316)
296 cd06649 PKc_MEK2 Catalytic dom 99.3 4.3E-12 9.3E-17 123.7 6.4 63 12-93 141-206 (331)
297 cd07859 STKc_TDY_MAPK_plant Ca 99.3 1.9E-12 4.1E-17 126.8 3.9 131 11-160 139-289 (338)
298 cd05608 STKc_GRK1 Catalytic do 99.3 2.5E-12 5.3E-17 122.3 4.3 112 11-156 133-247 (280)
299 PTZ00284 protein kinase; Provi 99.3 1.4E-12 3E-17 133.3 2.8 63 13-93 286-349 (467)
300 cd05586 STKc_Sck1_like Catalyt 99.3 2E-12 4.3E-17 126.1 3.5 109 12-157 133-245 (330)
301 KOG4497 Uncharacterized conser 99.3 4.1E-10 9E-15 100.8 17.7 289 225-536 14-390 (447)
302 cd05570 STKc_PKC Catalytic dom 99.3 2.7E-12 5.9E-17 124.4 4.4 106 11-155 132-241 (318)
303 cd05096 PTKc_DDR1 Catalytic do 99.3 2.8E-12 6.1E-17 123.6 4.3 124 12-163 175-303 (304)
304 KOG0614 cGMP-dependent protein 99.3 9.9E-13 2.1E-17 124.8 1.1 107 11-154 556-665 (732)
305 cd05595 STKc_PKB_beta Catalyti 99.3 1.7E-12 3.7E-17 126.0 2.7 105 12-154 132-239 (323)
306 cd07875 STKc_JNK1 Catalytic do 99.3 3.7E-12 8.1E-17 126.0 5.2 65 11-93 162-229 (364)
307 cd05618 STKc_aPKC_iota Catalyt 99.3 3.1E-12 6.6E-17 124.6 4.3 114 12-155 133-250 (329)
308 cd05587 STKc_cPKC Catalytic do 99.3 2.8E-12 6.1E-17 124.7 4.0 107 12-156 138-247 (324)
309 cd05036 PTKc_ALK_LTK Catalytic 99.3 4.5E-12 9.7E-17 120.4 5.3 116 13-163 157-276 (277)
310 cd05615 STKc_cPKC_alpha Cataly 99.3 4E-12 8.6E-17 123.5 4.9 107 12-156 138-247 (323)
311 PTZ00036 glycogen synthase kin 99.3 2.5E-12 5.4E-17 129.9 3.6 131 13-160 209-350 (440)
312 KOG0584 Serine/threonine prote 99.3 2.2E-12 4.7E-17 126.1 2.9 107 14-160 185-295 (632)
313 cd05600 STKc_Sid2p_Dbf2p Catal 99.3 3.3E-12 7.2E-17 124.7 4.2 116 11-160 137-256 (333)
314 cd05605 STKc_GRK4_like Catalyt 99.3 6.9E-12 1.5E-16 119.6 6.1 109 12-155 139-250 (285)
315 cd05607 STKc_GRK7 Catalytic do 99.2 4E-12 8.6E-17 120.7 4.4 114 12-159 132-248 (277)
316 cd05617 STKc_aPKC_zeta Catalyt 99.2 3.9E-12 8.3E-17 123.8 4.4 113 12-156 133-249 (327)
317 cd07863 STKc_CDK4 Catalytic do 99.2 3.1E-12 6.7E-17 122.3 3.6 63 12-92 145-210 (288)
318 PHA02882 putative serine/threo 99.2 9.7E-12 2.1E-16 119.1 7.0 122 12-162 163-293 (294)
319 cd05104 PTKc_Kit Catalytic dom 99.2 9.7E-12 2.1E-16 123.2 7.2 120 11-164 250-373 (375)
320 cd07871 STKc_PCTAIRE3 Catalyti 99.2 2.2E-12 4.8E-17 123.2 2.4 132 12-160 140-284 (288)
321 cd07876 STKc_JNK2 Catalytic do 99.2 5.9E-12 1.3E-16 124.3 5.4 65 11-93 159-226 (359)
322 KOG1409 Uncharacterized conser 99.2 3.8E-09 8.2E-14 95.4 22.4 221 224-454 29-270 (404)
323 KOG4190 Uncharacterized conser 99.2 4.9E-11 1.1E-15 113.6 10.8 282 242-533 725-1032(1034)
324 cd05044 PTKc_c-ros Catalytic d 99.2 4E-12 8.7E-17 120.2 3.7 115 13-163 149-268 (269)
325 PHA03207 serine/threonine kina 99.2 7.8E-12 1.7E-16 124.8 5.9 66 12-92 222-290 (392)
326 KOG0690 Serine/threonine prote 99.2 1.7E-12 3.7E-17 116.6 0.9 67 14-95 307-374 (516)
327 cd05052 PTKc_Abl Catalytic dom 99.2 8.2E-12 1.8E-16 117.6 5.6 118 12-165 141-262 (263)
328 cd08529 STKc_FA2-like Catalyti 99.2 7E-12 1.5E-16 117.6 5.1 112 12-160 138-252 (256)
329 cd05092 PTKc_TrkA Catalytic do 99.2 6.1E-12 1.3E-16 119.7 4.7 115 12-162 159-278 (280)
330 PLN00034 mitogen-activated pro 99.2 3.5E-12 7.5E-17 125.6 3.0 119 12-160 205-327 (353)
331 KOG4717 Serine/threonine prote 99.2 2.9E-12 6.3E-17 121.9 2.3 110 12-160 156-269 (864)
332 cd05090 PTKc_Ror1 Catalytic do 99.2 8.5E-12 1.8E-16 118.9 5.6 117 12-163 161-281 (283)
333 cd05072 PTKc_Lyn Catalytic dom 99.2 8.6E-12 1.9E-16 117.3 5.5 116 12-164 140-260 (261)
334 PRK11138 outer membrane biogen 99.2 1.1E-08 2.4E-13 102.0 28.1 265 259-537 66-353 (394)
335 PRK03629 tolB translocation pr 99.2 3.9E-09 8.4E-14 106.0 24.8 213 248-472 194-425 (429)
336 cd05105 PTKc_PDGFR_alpha Catal 99.2 4E-12 8.8E-17 126.4 3.3 121 12-166 274-398 (400)
337 cd05043 PTK_Ryk Pseudokinase d 99.2 9.1E-12 2E-16 118.5 5.6 119 12-166 154-277 (280)
338 cd06609 STKc_MST3_like Catalyt 99.2 8.1E-12 1.8E-16 118.4 5.2 114 11-160 134-250 (274)
339 cd05596 STKc_ROCK Catalytic do 99.2 2.4E-12 5.2E-17 127.3 1.6 120 11-160 178-303 (370)
340 cd07874 STKc_JNK3 Catalytic do 99.2 7.3E-12 1.6E-16 123.5 5.0 65 11-93 155-222 (355)
341 PHA03212 serine/threonine kina 99.2 7.3E-12 1.6E-16 124.4 5.0 64 12-91 219-285 (391)
342 cd05045 PTKc_RET Catalytic dom 99.2 1.2E-11 2.5E-16 118.4 6.2 121 11-166 163-287 (290)
343 cd05588 STKc_aPKC Catalytic do 99.2 6.9E-12 1.5E-16 122.1 4.6 114 12-155 133-250 (329)
344 cd05632 STKc_GRK5 Catalytic do 99.2 8.7E-12 1.9E-16 118.9 5.0 110 12-156 139-251 (285)
345 PRK03629 tolB translocation pr 99.2 1.3E-08 2.8E-13 102.3 28.0 215 272-497 179-411 (429)
346 KOG2345 Serine/threonine prote 99.2 1.1E-11 2.5E-16 107.4 5.0 101 35-165 198-300 (302)
347 PF02239 Cytochrom_D1: Cytochr 99.2 7.1E-09 1.5E-13 101.1 24.9 263 262-537 5-302 (369)
348 cd05630 STKc_GRK6 Catalytic do 99.2 1.4E-11 3E-16 117.4 5.6 109 12-155 139-250 (285)
349 cd06654 STKc_PAK1 Catalytic do 99.2 5E-12 1.1E-16 121.2 2.5 114 12-160 153-269 (296)
350 cd05070 PTKc_Fyn_Yrk Catalytic 99.2 1.6E-11 3.4E-16 115.5 5.8 115 12-163 139-258 (260)
351 cd05062 PTKc_IGF-1R Catalytic 99.2 9.3E-12 2E-16 118.2 4.2 115 12-162 156-275 (277)
352 PF02239 Cytochrom_D1: Cytochr 99.2 4.3E-08 9.3E-13 95.6 29.8 292 242-538 26-348 (369)
353 cd05075 PTKc_Axl Catalytic dom 99.2 1.5E-11 3.2E-16 116.5 5.5 118 12-165 149-271 (272)
354 cd08219 STKc_Nek3 Catalytic do 99.2 4.1E-12 8.9E-17 119.1 1.6 111 12-160 137-251 (255)
355 cd05035 PTKc_Axl_like Catalyti 99.2 1.5E-11 3.3E-16 116.5 5.4 117 13-165 151-272 (273)
356 KOG0983 Mitogen-activated prot 99.2 3.4E-12 7.4E-17 112.0 0.8 114 12-158 229-346 (391)
357 cd06650 PKc_MEK1 Catalytic dom 99.2 1.4E-11 3E-16 120.2 5.2 64 12-94 141-207 (333)
358 cd05573 STKc_ROCK_NDR_like Cat 99.2 7E-12 1.5E-16 123.5 3.1 95 32-160 187-284 (350)
359 cd05051 PTKc_DDR Catalytic dom 99.2 1.2E-11 2.6E-16 118.7 4.6 122 12-162 167-294 (296)
360 cd05053 PTKc_FGFR Catalytic do 99.2 1.8E-11 3.9E-16 117.3 5.9 121 11-166 168-292 (293)
361 KOG0604 MAP kinase-activated p 99.2 1.2E-11 2.7E-16 110.0 4.2 119 11-160 200-321 (400)
362 cd05055 PTKc_PDGFR Catalytic d 99.2 2.4E-11 5.2E-16 116.8 6.7 120 11-165 177-301 (302)
363 PRK05137 tolB translocation pr 99.2 1.5E-08 3.3E-13 102.4 27.2 214 272-496 182-416 (435)
364 cd05101 PTKc_FGFR2 Catalytic d 99.2 2E-11 4.3E-16 117.6 6.0 119 12-166 174-297 (304)
365 cd05071 PTKc_Src Catalytic dom 99.2 7.9E-12 1.7E-16 117.6 3.0 118 11-165 138-260 (262)
366 cd05622 STKc_ROCK1 Catalytic d 99.2 7E-12 1.5E-16 124.0 2.7 73 11-95 178-253 (371)
367 cd06616 PKc_MKK4 Catalytic dom 99.2 5.1E-12 1.1E-16 120.8 1.7 117 12-160 145-266 (288)
368 cd08229 STKc_Nek7 Catalytic do 99.2 1.3E-11 2.8E-16 116.5 4.4 120 12-165 143-265 (267)
369 cd05109 PTKc_HER2 Catalytic do 99.2 6E-12 1.3E-16 119.7 2.1 121 12-167 146-270 (279)
370 cd05064 PTKc_EphR_A10 Catalyti 99.2 1.9E-11 4.1E-16 115.3 5.5 119 11-165 143-265 (266)
371 cd05610 STKc_MASTL Catalytic d 99.2 3.3E-12 7.2E-17 135.3 0.4 95 33-160 538-633 (669)
372 cd05108 PTKc_EGFR Catalytic do 99.2 2.5E-11 5.5E-16 117.6 6.5 123 12-169 146-272 (316)
373 cd05032 PTKc_InsR_like Catalyt 99.2 1.9E-11 4.1E-16 116.1 5.4 115 12-162 156-275 (277)
374 cd05082 PTKc_Csk Catalytic dom 99.2 2.1E-11 4.5E-16 114.4 5.6 113 11-164 138-255 (256)
375 cd06637 STKc_TNIK Catalytic do 99.2 2.1E-11 4.5E-16 115.5 5.5 116 12-160 148-268 (272)
376 KOG0986 G protein-coupled rece 99.2 7E-12 1.5E-16 117.7 2.0 103 18-156 332-436 (591)
377 cd05116 PTKc_Syk Catalytic dom 99.2 1.9E-11 4.1E-16 114.7 4.9 117 12-164 132-254 (257)
378 cd05097 PTKc_DDR_like Catalyti 99.2 1.3E-11 2.9E-16 118.3 3.9 124 12-163 166-294 (295)
379 KOG2139 WD40 repeat protein [G 99.2 1.9E-08 4.2E-13 91.5 23.7 233 252-491 140-430 (445)
380 cd05098 PTKc_FGFR1 Catalytic d 99.2 2.5E-11 5.4E-16 117.1 5.7 120 12-166 177-300 (307)
381 KOG0974 WD-repeat protein WDR6 99.2 7.7E-10 1.7E-14 113.4 16.5 187 304-494 98-290 (967)
382 PHA03211 serine/threonine kina 99.2 2.6E-11 5.6E-16 122.2 5.9 61 12-87 297-359 (461)
383 KOG2321 WD40 repeat protein [G 99.2 2.9E-09 6.2E-14 102.4 19.2 233 290-536 49-301 (703)
384 cd05069 PTKc_Yes Catalytic dom 99.2 2.4E-11 5.2E-16 114.2 5.4 116 12-164 139-259 (260)
385 cd07869 STKc_PFTAIRE1 Catalyti 99.2 2.7E-11 5.9E-16 116.6 5.8 66 11-92 139-207 (303)
386 cd07878 STKc_p38beta_MAPK11 Ca 99.2 1.6E-11 3.5E-16 120.4 4.2 62 12-92 155-219 (343)
387 cd07831 STKc_MOK Catalytic dom 99.2 3.2E-11 6.8E-16 114.9 6.0 125 12-160 136-278 (282)
388 cd05099 PTKc_FGFR4 Catalytic d 99.2 9.9E-12 2.1E-16 120.3 2.6 119 12-166 171-294 (314)
389 KOG0661 MAPK related serine/th 99.2 2.9E-11 6.3E-16 114.4 5.5 135 2-161 141-291 (538)
390 cd05601 STKc_CRIK Catalytic do 99.2 8.4E-12 1.8E-16 121.7 2.0 120 12-160 139-262 (330)
391 PF08662 eIF2A: Eukaryotic tra 99.2 5.3E-09 1.1E-13 92.5 19.6 146 346-496 11-183 (194)
392 cd05033 PTKc_EphR Catalytic do 99.2 3.2E-11 6.9E-16 113.8 5.8 118 12-165 143-265 (266)
393 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.2 8.5E-12 1.8E-16 117.1 1.9 108 13-162 146-257 (258)
394 PRK13184 pknD serine/threonine 99.2 1.6E-11 3.5E-16 129.9 4.0 100 34-166 190-291 (932)
395 cd08228 STKc_Nek6 Catalytic do 99.2 1.7E-11 3.6E-16 115.8 3.8 116 13-165 144-265 (267)
396 PRK04922 tolB translocation pr 99.2 1.4E-08 3E-13 102.6 24.9 212 272-495 184-414 (433)
397 KOG0593 Predicted protein kina 99.2 2.6E-11 5.5E-16 108.2 4.3 64 11-91 137-204 (396)
398 cd00192 PTKc Catalytic domain 99.2 4.9E-11 1.1E-15 112.1 6.6 115 12-162 142-261 (262)
399 PF07714 Pkinase_Tyr: Protein 99.2 1.8E-11 4E-16 114.9 3.6 115 11-161 139-258 (259)
400 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.2 3.7E-11 8E-16 114.5 5.7 133 12-165 144-281 (283)
401 cd05095 PTKc_DDR2 Catalytic do 99.1 2.7E-11 5.9E-16 116.2 4.7 124 12-163 167-295 (296)
402 PRK04922 tolB translocation pr 99.1 8E-09 1.7E-13 104.2 22.7 211 246-468 197-426 (433)
403 PF13360 PQQ_2: PQQ-like domai 99.1 6.1E-08 1.3E-12 89.7 27.0 219 270-499 1-237 (238)
404 cd07853 STKc_NLK Catalytic dom 99.1 3.8E-11 8.3E-16 119.1 5.8 134 11-160 139-287 (372)
405 KOG0660 Mitogen-activated prot 99.1 3.3E-11 7.1E-16 110.5 4.8 130 15-160 165-309 (359)
406 KOG1354 Serine/threonine prote 99.1 8.9E-09 1.9E-13 93.0 20.0 241 252-495 25-362 (433)
407 KOG0577 Serine/threonine prote 99.1 2E-11 4.4E-16 118.1 3.5 113 11-161 162-278 (948)
408 cd05621 STKc_ROCK2 Catalytic d 99.1 1.6E-11 3.5E-16 121.2 2.9 72 12-95 179-253 (370)
409 cd06642 STKc_STK25-YSK1 Cataly 99.1 1.4E-11 3.1E-16 116.9 2.5 112 12-160 138-252 (277)
410 cd06619 PKc_MKK5 Catalytic dom 99.1 1.7E-11 3.7E-16 116.5 3.0 117 11-160 131-252 (279)
411 cd06640 STKc_MST4 Catalytic do 99.1 1.7E-11 3.7E-16 116.4 2.9 113 12-161 138-253 (277)
412 KOG1064 RAVE (regulator of V-A 99.1 3.2E-10 7E-15 121.7 12.4 224 290-530 2206-2439(2439)
413 cd05627 STKc_NDR2 Catalytic do 99.1 1.7E-11 3.8E-16 121.0 2.9 47 34-95 195-242 (360)
414 KOG0610 Putative serine/threon 99.1 8.6E-12 1.9E-16 116.0 0.6 91 32-156 292-383 (459)
415 PRK02889 tolB translocation pr 99.1 2.3E-08 4.9E-13 100.6 25.1 212 272-494 176-405 (427)
416 KOG0696 Serine/threonine prote 99.1 1.5E-11 3.3E-16 114.0 2.0 52 32-98 507-559 (683)
417 cd05100 PTKc_FGFR3 Catalytic d 99.1 5.2E-11 1.1E-15 116.4 5.8 120 12-167 171-295 (334)
418 cd06645 STKc_MAP4K3 Catalytic 99.1 1.6E-11 3.5E-16 115.9 2.1 117 13-160 144-264 (267)
419 cd05047 PTKc_Tie Catalytic dom 99.1 4.5E-11 9.7E-16 113.1 5.2 95 36-166 172-269 (270)
420 cd05107 PTKc_PDGFR_beta Cataly 99.1 2E-11 4.4E-16 121.3 2.9 121 11-166 275-400 (401)
421 cd05040 PTKc_Ack_like Catalyti 99.1 1.8E-11 3.8E-16 114.9 2.3 116 12-162 134-255 (257)
422 cd05057 PTKc_EGFR_like Catalyt 99.1 5.5E-11 1.2E-15 113.1 5.7 121 11-166 145-269 (279)
423 cd06646 STKc_MAP4K5 Catalytic 99.1 1.9E-11 4.2E-16 115.4 2.6 118 12-160 143-264 (267)
424 KOG0974 WD-repeat protein WDR6 99.1 3.4E-09 7.3E-14 108.9 18.7 192 253-453 88-287 (967)
425 cd05060 PTKc_Syk_like Catalyti 99.1 5.5E-11 1.2E-15 111.6 5.5 117 12-165 132-255 (257)
426 cd05148 PTKc_Srm_Brk Catalytic 99.1 5.8E-11 1.2E-15 111.7 5.7 115 13-164 142-260 (261)
427 cd08223 STKc_Nek4 Catalytic do 99.1 4.1E-11 8.8E-16 112.4 4.6 94 32-160 159-253 (257)
428 cd05058 PTKc_Met_Ron Catalytic 99.1 4.4E-11 9.5E-16 112.6 4.8 119 12-166 135-260 (262)
429 KOG0579 Ste20-like serine/thre 99.1 2.1E-11 4.5E-16 118.9 2.6 99 33-160 188-288 (1187)
430 cd06608 STKc_myosinIII_like Ca 99.1 5.3E-11 1.2E-15 112.8 5.4 118 12-160 150-271 (275)
431 cd07872 STKc_PCTAIRE2 Catalyti 99.1 2.6E-11 5.5E-16 117.2 3.3 132 12-160 141-285 (309)
432 KOG0197 Tyrosine kinases [Sign 99.1 9.4E-11 2E-15 113.1 7.0 119 11-166 339-462 (468)
433 cd05114 PTKc_Tec_Rlk Catalytic 99.1 4E-11 8.8E-16 112.4 4.5 113 12-161 137-254 (256)
434 cd05061 PTKc_InsR Catalytic do 99.1 5E-11 1.1E-15 113.9 5.2 120 12-166 156-279 (288)
435 cd05067 PTKc_Lck_Blk Catalytic 99.1 6.8E-11 1.5E-15 111.2 6.0 115 12-163 139-258 (260)
436 cd05089 PTKc_Tie1 Catalytic do 99.1 6.1E-11 1.3E-15 113.8 5.7 94 38-167 181-277 (297)
437 cd05084 PTKc_Fes Catalytic dom 99.1 4.2E-11 9.2E-16 112.0 4.5 115 12-162 131-250 (252)
438 cd06620 PKc_MAPKK_Byr1_like Ca 99.1 5.2E-11 1.1E-15 113.6 5.1 120 12-160 141-265 (284)
439 cd05073 PTKc_Hck Catalytic dom 99.1 7.2E-11 1.6E-15 111.0 6.0 116 12-164 139-259 (260)
440 cd05598 STKc_LATS Catalytic do 99.1 1.6E-11 3.4E-16 122.1 1.5 47 34-95 203-250 (376)
441 cd05050 PTKc_Musk Catalytic do 99.1 5.2E-11 1.1E-15 113.8 5.1 117 11-163 166-287 (288)
442 cd06625 STKc_MEKK3_like Cataly 99.1 5E-11 1.1E-15 112.2 4.9 114 12-160 141-259 (263)
443 cd05110 PTKc_HER4 Catalytic do 99.1 6.4E-11 1.4E-15 114.0 5.7 120 12-166 146-269 (303)
444 PRK05137 tolB translocation pr 99.1 5.7E-08 1.2E-12 98.2 27.2 197 246-454 195-412 (435)
445 PF08662 eIF2A: Eukaryotic tra 99.1 1.2E-08 2.6E-13 90.3 19.6 148 296-453 9-178 (194)
446 cd05628 STKc_NDR1 Catalytic do 99.1 2.8E-11 6.1E-16 119.6 3.2 47 34-95 195-242 (363)
447 cd05059 PTKc_Tec_like Catalyti 99.1 6.7E-11 1.5E-15 110.9 5.6 114 11-161 136-254 (256)
448 cd06659 STKc_PAK6 Catalytic do 99.1 3.6E-11 7.7E-16 115.4 3.8 114 12-160 154-270 (297)
449 cd08528 STKc_Nek10 Catalytic d 99.1 8.7E-11 1.9E-15 111.0 6.4 113 12-162 151-267 (269)
450 cd06636 STKc_MAP4K4_6 Catalyti 99.1 4.7E-11 1E-15 113.7 4.5 99 33-160 179-278 (282)
451 cd06612 STKc_MST1_2 Catalytic 99.1 2.9E-11 6.3E-16 113.3 3.0 113 12-160 136-252 (256)
452 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 5.9E-11 1.3E-15 112.0 5.0 117 12-165 143-265 (267)
453 cd05085 PTKc_Fer Catalytic dom 99.1 7.9E-11 1.7E-15 110.0 5.7 114 12-162 130-248 (250)
454 cd05063 PTKc_EphR_A2 Catalytic 99.1 8.1E-11 1.8E-15 111.2 5.9 118 12-165 144-267 (268)
455 KOG0607 MAP kinase-interacting 99.1 1.9E-11 4.1E-16 109.7 1.1 109 32-159 243-359 (463)
456 cd06658 STKc_PAK5 Catalytic do 99.1 4E-11 8.6E-16 114.7 3.4 114 12-160 155-271 (292)
457 cd08220 STKc_Nek8 Catalytic do 99.1 6.8E-11 1.5E-15 110.8 4.9 110 13-160 140-252 (256)
458 cd06643 STKc_SLK Catalytic dom 99.1 5.8E-11 1.3E-15 113.1 4.5 118 12-160 140-261 (282)
459 cd05074 PTKc_Tyro3 Catalytic d 99.1 6.8E-11 1.5E-15 112.0 4.9 118 13-165 151-272 (273)
460 cd05626 STKc_LATS2 Catalytic d 99.1 3.3E-11 7.2E-16 119.9 2.8 47 34-95 207-254 (381)
461 cd07839 STKc_CDK5 Catalytic do 99.1 4.4E-11 9.6E-16 114.0 3.5 63 12-90 136-201 (284)
462 PHA03390 pk1 serine/threonine- 99.1 4.8E-11 1E-15 112.6 3.7 109 13-159 148-260 (267)
463 cd08217 STKc_Nek2 Catalytic do 99.1 6.7E-11 1.5E-15 111.4 4.7 111 12-160 147-261 (265)
464 cd06638 STKc_myosinIIIA Cataly 99.1 8.7E-11 1.9E-15 112.1 5.5 117 13-160 162-282 (286)
465 cd07873 STKc_PCTAIRE1 Catalyti 99.1 3.7E-11 8.1E-16 115.6 2.9 129 12-160 141-285 (301)
466 KOG0603 Ribosomal protein S6 k 99.1 2.8E-11 6E-16 118.9 2.0 100 18-160 461-562 (612)
467 cd06655 STKc_PAK2 Catalytic do 99.1 8.6E-11 1.9E-15 112.7 5.4 113 12-160 152-268 (296)
468 cd05077 PTK_Jak1_rpt1 Pseudoki 99.1 7E-11 1.5E-15 111.2 4.6 93 34-162 167-261 (262)
469 cd07861 STKc_CDK1_euk Catalyti 99.1 4.8E-11 1E-15 113.8 3.6 132 11-160 137-281 (285)
470 PRK02889 tolB translocation pr 99.1 5E-08 1.1E-12 98.2 25.3 189 248-446 191-392 (427)
471 cd06648 STKc_PAK_II Catalytic 99.1 8.6E-11 1.9E-15 112.0 5.2 113 12-160 152-268 (285)
472 cd05599 STKc_NDR_like Catalyti 99.1 3E-11 6.4E-16 119.6 2.0 47 34-95 198-245 (364)
473 cd05115 PTKc_Zap-70 Catalytic 99.1 8.7E-11 1.9E-15 110.2 5.1 119 12-165 132-255 (257)
474 cd08225 STKc_Nek5 Catalytic do 99.1 8.4E-11 1.8E-15 110.3 5.0 111 13-160 140-253 (257)
475 cd07837 STKc_CdkB_plant Cataly 99.1 6.4E-11 1.4E-15 113.6 4.2 134 11-160 147-290 (295)
476 cd07838 STKc_CDK4_6_like Catal 99.1 1.5E-10 3.4E-15 110.4 6.8 122 12-160 144-283 (287)
477 cd05625 STKc_LATS1 Catalytic d 99.1 2.6E-11 5.6E-16 120.8 1.5 47 34-95 207-254 (382)
478 cd05103 PTKc_VEGFR2 Catalytic 99.1 5.2E-11 1.1E-15 116.7 3.6 122 11-167 215-341 (343)
479 cd05633 STKc_GRK3 Catalytic do 99.1 7E-11 1.5E-15 112.2 4.4 107 12-154 134-243 (279)
480 cd05088 PTKc_Tie2 Catalytic do 99.1 1.2E-10 2.6E-15 112.1 5.9 95 36-166 184-281 (303)
481 cd05041 PTKc_Fes_like Catalyti 99.1 1.1E-10 2.4E-15 109.1 5.3 92 36-163 156-250 (251)
482 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.1 5.6E-11 1.2E-15 112.3 3.4 126 12-162 137-267 (269)
483 cd06628 STKc_MAPKKK_Byr2_like 99.1 1.2E-10 2.5E-15 110.0 5.5 90 34-160 171-263 (267)
484 cd05611 STKc_Rim15_like Cataly 99.1 5.9E-11 1.3E-15 111.6 3.4 112 12-161 134-248 (260)
485 cd06610 STKc_OSR1_SPAK Catalyt 99.1 4.9E-11 1.1E-15 112.5 2.9 120 12-160 139-263 (267)
486 cd05112 PTKc_Itk Catalytic dom 99.1 9.8E-11 2.1E-15 109.8 4.8 114 11-161 136-254 (256)
487 cd05068 PTKc_Frk_like Catalyti 99.1 2.7E-11 5.7E-16 114.0 1.0 115 12-163 140-259 (261)
488 cd07879 STKc_p38delta_MAPK13 C 99.1 4.8E-11 1E-15 116.9 2.8 64 11-93 153-219 (342)
489 cd08221 STKc_Nek9 Catalytic do 99.1 4E-11 8.8E-16 112.4 2.2 111 12-160 138-252 (256)
490 TIGR02800 propeller_TolB tol-p 99.1 5.4E-08 1.2E-12 98.3 25.0 189 246-446 183-386 (417)
491 cd05609 STKc_MAST Catalytic do 99.1 5.8E-11 1.3E-15 114.4 3.2 98 34-164 175-273 (305)
492 cd05039 PTKc_Csk_like Catalyti 99.1 1.1E-10 2.4E-15 109.4 5.0 113 11-164 138-255 (256)
493 cd05113 PTKc_Btk_Bmx Catalytic 99.1 1E-10 2.2E-15 109.6 4.7 113 12-161 137-254 (256)
494 cd06613 STKc_MAP4K3_like Catal 99.1 5.3E-11 1.1E-15 112.0 2.8 115 14-160 140-259 (262)
495 KOG1409 Uncharacterized conser 99.1 1.4E-08 3E-13 91.9 17.7 240 284-537 16-270 (404)
496 cd05079 PTKc_Jak1_rpt2 Catalyt 99.1 1.7E-10 3.7E-15 110.0 6.1 133 12-165 146-283 (284)
497 cd06639 STKc_myosinIIIB Cataly 99.1 1.2E-10 2.7E-15 111.4 5.1 117 13-160 166-286 (291)
498 PHA03210 serine/threonine kina 99.1 1.2E-10 2.6E-15 119.6 5.3 64 11-90 303-370 (501)
499 cd06624 STKc_ASK Catalytic dom 99.1 1.2E-10 2.7E-15 109.9 5.0 116 12-160 146-264 (268)
500 cd07850 STKc_JNK Catalytic dom 99.1 1.2E-10 2.7E-15 114.6 5.2 63 12-92 155-220 (353)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3e-43 Score=314.73 Aligned_cols=311 Identities=24% Similarity=0.395 Sum_probs=261.9
Q ss_pred hcCCCCCCCccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeC
Q 009274 211 LLGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL 279 (538)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~ 279 (538)
..+...-.+.++-++.+++.+..+++++.+..+++|++ ++|...|.|++|+ |+.||+|+.||+|++||.
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdp 186 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDP 186 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecC
Confidence 34445556677999999999999999999999999984 6999999999999 999999999999999999
Q ss_pred CCCceE-EEEecCCcCeEEEEEec----CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-
Q 009274 280 KDFSHV-HTFKGHDHKVMAVVYVD----EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR- 353 (538)
Q Consensus 280 ~~~~~~-~~~~~h~~~v~~l~~~~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 353 (538)
++|+++ ..+++|...|++++|.| ...+++++++.||.++|||+..+.....+. . +..++.|+.+.|.
T Consensus 187 ktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~ls---g----HT~~VTCvrwGG~g 259 (480)
T KOG0271|consen 187 KTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLS---G----HTASVTCVRWGGEG 259 (480)
T ss_pred CCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEec---c----CccceEEEEEcCCc
Confidence 998775 67899999999999976 345588999999999999998654433332 2 3445778888865
Q ss_pred EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-------------CC-------------------------EE
Q 009274 354 YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-------------NG-------------------------VL 395 (538)
Q Consensus 354 ~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-------------~~-------------------------~l 395 (538)
++++|+.|++|++|+...|.+..++++|...|+.++.+ ++ .+
T Consensus 260 liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erl 339 (480)
T KOG0271|consen 260 LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERL 339 (480)
T ss_pred eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCccee
Confidence 99999999999999999999999999999999999876 22 39
Q ss_pred EEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe
Q 009274 396 YSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL 472 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~ 472 (538)
++|+.|.++.+|+....+ ++..+.+|. ..+.. +.|+||++++++++.|..|++|| .++.+.++.+|-+.|+.++|
T Consensus 340 VSgsDd~tlflW~p~~~kkpi~rmtgHq-~lVn~-V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvaw 417 (480)
T KOG0271|consen 340 VSGSDDFTLFLWNPFKSKKPITRMTGHQ-ALVNH-VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAW 417 (480)
T ss_pred EEecCCceEEEecccccccchhhhhchh-hheee-EEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEe
Confidence 999999999999986544 666666653 34444 69999999999999999999998 66789999999999999999
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEECCCeEEEEE
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCADRTVKVYY 535 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~ 535 (538)
|.++|++||.|.++++||+++.++...+.. +...+.++.| +||. +++|+.|..+++|.
T Consensus 418 saDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG-----h~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 418 SADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG-----HADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ccCccEEEEcCCCceEEEEEeeeeeecccCCC-----CCceEEEEEecCCCceeecCCCceEEEeec
Confidence 888999999999999999999987655442 3445566555 4665 77799999999996
No 2
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=4.2e-40 Score=355.02 Aligned_cols=279 Identities=18% Similarity=0.220 Sum_probs=211.5
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----c----eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcE
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----S----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 317 (538)
+.+|.+.|++++|+ ++++++|+.|++|+|||..+. . ....+. +...+.+++|++..+.++++++.||+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 45699999999999 899999999999999997532 1 222333 456899999998778899999999999
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CC
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NG 393 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~ 393 (538)
++||+.++.. +..+..+.. ....+++++ ++.+|++|+.||+|++||++++..+..+..+ ..|.++.|. +.
T Consensus 558 ~lWd~~~~~~---~~~~~~H~~--~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~ 631 (793)
T PLN00181 558 QVWDVARSQL---VTEMKEHEK--RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGR 631 (793)
T ss_pred EEEECCCCeE---EEEecCCCC--CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCC
Confidence 9999986543 233333332 122345664 6789999999999999999999988888754 679999996 45
Q ss_pred EEEEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--------cceeeecccc
Q 009274 394 VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMKSMQTHK 464 (538)
Q Consensus 394 ~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--------~~~~~~~~h~ 464 (538)
++++|+.|+.|++||+++.+ ....+..| ...+.. +.|. ++.++++++.|++|++||.. +++..+.+|.
T Consensus 632 ~latgs~dg~I~iwD~~~~~~~~~~~~~h-~~~V~~-v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~ 708 (793)
T PLN00181 632 SLAFGSADHKVYYYDLRNPKLPLCTMIGH-SKTVSY-VRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHT 708 (793)
T ss_pred EEEEEeCCCeEEEEECCCCCccceEecCC-CCCEEE-EEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCC
Confidence 99999999999999998876 35555544 344444 5675 67899999999999999965 3567888999
Q ss_pred ceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeee--cCC------cccCCCceEEEEEe-CC-EEEEEECCCeEE
Q 009274 465 GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI--PTG------AIPCGSVITALLYW-QG-KLFVGCADRTVK 532 (538)
Q Consensus 465 ~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~ 532 (538)
..+.++.+ ++.+|++|+.|+.|++|+........... ... ...+...+..+.|. ++ .|++|+.||.|+
T Consensus 709 ~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~ 788 (793)
T PLN00181 709 NVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIK 788 (793)
T ss_pred CCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEE
Confidence 88877765 88999999999999999987553221111 100 01123456666664 44 588999999999
Q ss_pred EEEc
Q 009274 533 VYYY 536 (538)
Q Consensus 533 vw~~ 536 (538)
||++
T Consensus 789 i~~~ 792 (793)
T PLN00181 789 ILEM 792 (793)
T ss_pred EEec
Confidence 9997
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.9e-42 Score=305.31 Aligned_cols=282 Identities=24% Similarity=0.399 Sum_probs=231.4
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+.||.++|.|++|+ +..|+||+.|.++|+||+.+..+..+.++|...|.|++|+|++. .+++|+.||.|++||..
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk-~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGK-KIASGSKDGSIRLWDPK 187 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcc-hhhccccCCeEEEecCC
Confidence 4589999999999999 89999999999999999999999999999999999999999665 66999999999999988
Q ss_pred CCCCCcceeeecccCCceeeeEEEE-----eecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHAL-----TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYS 397 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s 397 (538)
+++.. ...+..|..+. ...++ .|..++|++++.||.|+|||+..+.++..+.+|+.+|+|+.|- .+++++
T Consensus 188 tg~~~--g~~l~gH~K~I--t~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliyS 263 (480)
T KOG0271|consen 188 TGQQI--GRALRGHKKWI--TALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYS 263 (480)
T ss_pred CCCcc--cccccCcccce--eEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEe
Confidence 76543 23333443321 12233 2345699999999999999999999999999999999999999 779999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEE-----------cCCCC-------------------------EEEE
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL-----------TAVQH-------------------------TLVV 441 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-------------------------~l~~ 441 (538)
||.|++|++|+...|.+.+.+++|.... .. ++. .|.++ .+++
T Consensus 264 gS~DrtIkvw~a~dG~~~r~lkGHahwv-N~-lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVS 341 (480)
T KOG0271|consen 264 GSQDRTIKVWRALDGKLCRELKGHAHWV-NH-LALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVS 341 (480)
T ss_pred cCCCceEEEEEccchhHHHhhcccchhe-ee-eeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEE
Confidence 9999999999999999998888774322 21 233 33333 4999
Q ss_pred EeCCCcEEEEe---CCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE
Q 009274 442 SHESGSIKVWR---NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL 516 (538)
Q Consensus 442 ~~~dg~i~iwd---~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (538)
|+.|.++.+|+ ..+++..+.+|+.-|+.+.| |+++++++|.|..|++||-.+++....+... ...+..+.+
T Consensus 342 gsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGH----v~~VYqvaw 417 (480)
T KOG0271|consen 342 GSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGH----VAAVYQVAW 417 (480)
T ss_pred ecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhc----cceeEEEEe
Confidence 99999999998 34578889999999998876 9999999999999999999999876655421 233444444
Q ss_pred EeCCE-EEEEECCCeEEEEEcCC
Q 009274 517 YWQGK-LFVGCADRTVKVYYYGK 538 (538)
Q Consensus 517 ~~~~~-l~sg~~dg~v~vw~~~~ 538 (538)
+.|.+ |++|+.|.++++|++.+
T Consensus 418 saDsRLlVS~SkDsTLKvw~V~t 440 (480)
T KOG0271|consen 418 SADSRLLVSGSKDSTLKVWDVRT 440 (480)
T ss_pred ccCccEEEEcCCCceEEEEEeee
Confidence 45666 67799999999999863
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.6e-39 Score=294.74 Aligned_cols=275 Identities=21% Similarity=0.308 Sum_probs=235.8
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEEccCCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPL 326 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~ 326 (538)
|-+.+|..+.|+ ++.|+|||.+|.+++|+..+...+.+|.+|...|.++.|+|. +..-+++|+.||++++|++++..
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 567899999999 999999999999999999999999999999999999999998 47688999999999999998754
Q ss_pred CCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcE
Q 009274 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTI 404 (538)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i 404 (538)
....+ ..|. ....-.+|+|+|++|+|++.|.+-++||++++..+....||...|.+++|. +.++++|+.|..-
T Consensus 253 ~l~~l---~gH~--~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~ 327 (459)
T KOG0272|consen 253 PLQDL---EGHL--ARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLG 327 (459)
T ss_pred chhhh---hcch--hhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchh
Confidence 43333 3332 222345899999999999999999999999999999999999999999999 5599999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe---CCCEEEE
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFT 479 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~---~~~~l~s 479 (538)
+|||+++++++..+.+|. ..+.. +.|+|+|..+++|+.|++++|||++ +.+.++.+|.+-|..+.+ .|.+|+|
T Consensus 328 RvWDlRtgr~im~L~gH~-k~I~~-V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 328 RVWDLRTGRCIMFLAGHI-KEILS-VAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred heeecccCcEEEEecccc-cceee-EeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEE
Confidence 999999999999999864 44455 6999999999999999999999965 578899999999999987 6889999
Q ss_pred EeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEE
Q 009274 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYY 535 (538)
Q Consensus 480 gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~ 535 (538)
++.|+++++|...+..+...+... .+.++++-.++++. +++++.|.++++|.
T Consensus 406 asyD~t~kiWs~~~~~~~ksLaGH----e~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 406 ASYDNTVKIWSTRTWSPLKSLAGH----EGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cccCcceeeecCCCcccchhhcCC----ccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999999988765543321 23344444455655 78899999999995
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.8e-38 Score=287.94 Aligned_cols=267 Identities=21% Similarity=0.296 Sum_probs=235.0
Q ss_pred CCCCccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCC
Q 009274 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~ 282 (538)
--+..++....++.++..+++++..|..++|+ |.||.+.|.++.|+ +..++||+.||++++|++++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 34667788999999999999999999999987 78999999999998 458999999999999999999
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 362 (538)
.++..+.+|...|..++|+|+ +.+|.+++.|.+-++||+++.......... .. ....++|.+||..+++|+.|.
T Consensus 252 ~~l~~l~gH~~RVs~VafHPs-G~~L~TasfD~tWRlWD~~tk~ElL~QEGH---s~--~v~~iaf~~DGSL~~tGGlD~ 325 (459)
T KOG0272|consen 252 TPLQDLEGHLARVSRVAFHPS-GKFLGTASFDSTWRLWDLETKSELLLQEGH---SK--GVFSIAFQPDGSLAATGGLDS 325 (459)
T ss_pred cchhhhhcchhhheeeeecCC-CceeeecccccchhhcccccchhhHhhccc---cc--ccceeEecCCCceeeccCccc
Confidence 999999999999999999995 558899999999999999987554333322 21 122458899999999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEeCC--EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEE
Q 009274 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTL 439 (538)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 439 (538)
.-+|||+++|+++..+.+|..+|.+|+|+++ .+++||.|++++|||++..+.+.++..|. ..+.. +.++| .|.+|
T Consensus 326 ~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~-nlVS~-Vk~~p~~g~fL 403 (459)
T KOG0272|consen 326 LGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHS-NLVSQ-VKYSPQEGYFL 403 (459)
T ss_pred hhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccccc-chhhh-eEecccCCeEE
Confidence 9999999999999999999999999999933 89999999999999999999988888774 34444 58887 78899
Q ss_pred EEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 440 VVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 440 ~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
++++.|+++++|... .+++.+.+|.+.|.++.. ++++++|++.|.++++|.
T Consensus 404 ~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 404 VTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999999854 589999999999999875 999999999999999995
No 6
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=2.9e-38 Score=279.41 Aligned_cols=273 Identities=21% Similarity=0.358 Sum_probs=233.5
Q ss_pred CCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 251 HRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 251 h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..+.|.|+.+.++.+++|..|++|+|||.++..++..+.+|++.|.|+.| +.+++++|+.|.+|++||++++...+.
T Consensus 196 ~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy---d~rviisGSSDsTvrvWDv~tge~l~t 272 (499)
T KOG0281|consen 196 NSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY---DERVIVSGSSDSTVRVWDVNTGEPLNT 272 (499)
T ss_pred cCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec---cceEEEecCCCceEEEEeccCCchhhH
Confidence 56789999999999999999999999999999999999999999999999 566999999999999999998876655
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEE
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLW 407 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iw 407 (538)
+.. +...+..+-.++.++++++.|.++.+||+.+.. +.+.+.||...|+.+.|++++++++|.|.+|++|
T Consensus 273 lih-------HceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW 345 (499)
T KOG0281|consen 273 LIH-------HCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW 345 (499)
T ss_pred Hhh-------hcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEE
Confidence 443 333467778889999999999999999997654 3345689999999999999999999999999999
Q ss_pred ECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEeCCCEEEEEeCCCe
Q 009274 408 SLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFLEGKWLFTGGWDKT 485 (538)
Q Consensus 408 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~ 485 (538)
++.+++.++++.+|..+. .+....++++++|+.|.+|++|| .+.++..+++|..-|.|+.||.+.+++|+.||+
T Consensus 346 ~~st~efvRtl~gHkRGI----AClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~krIVSGaYDGk 421 (499)
T KOG0281|consen 346 STSTCEFVRTLNGHKRGI----ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK 421 (499)
T ss_pred eccceeeehhhhcccccc----eehhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecCceeeeccccce
Confidence 999999999998876543 45667899999999999999999 467899999999999999999999999999999
Q ss_pred EEEEecCCCeeEeeeec----CCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 486 VSVQELAGDEFEEDVIP----TGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 486 v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
|++||+....-...... .....+..-+.-+.+++-++++++.|.+|.||||-
T Consensus 422 ikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 422 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL 477 (499)
T ss_pred EEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcC
Confidence 99999986543211111 11122444566777888889999999999999984
No 7
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=4.1e-36 Score=266.88 Aligned_cols=281 Identities=21% Similarity=0.364 Sum_probs=235.5
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
.++||.++|.|+++. +.+|+||+.|++|+|||+.+|+...++.+|-..|..+++++ ...++++++.|+.|+.||++.
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~-rHpYlFs~gedk~VKCwDLe~ 224 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQVKCWDLEY 224 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc-cCceEEEecCCCeeEEEechh
Confidence 478999999999999 89999999999999999999999999999999999999987 455789999999999999986
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCC
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG 402 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg 402 (538)
.+ .++.+.++.. ...++++.|.-+.|++|+.|.++++||+++...+..+.||..+|.++.+. +..+++||.|+
T Consensus 225 nk---vIR~YhGHlS--~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~ 299 (460)
T KOG0285|consen 225 NK---VIRHYHGHLS--GVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDS 299 (460)
T ss_pred hh---hHHHhccccc--eeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCc
Confidence 54 3333333222 12234555667799999999999999999999999999999999999998 88999999999
Q ss_pred cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe-CCCEEEE
Q 009274 403 TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-EGKWLFT 479 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~-~~~~l~s 479 (538)
+|++||++.|+...++..|... ..+++.+|....+++++.| .|+-|+.. ..++.+.+|...|++++. +..++++
T Consensus 300 tvrlWDl~agkt~~tlt~hkks--vral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~ 376 (460)
T KOG0285|consen 300 TVRLWDLRAGKTMITLTHHKKS--VRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVS 376 (460)
T ss_pred eEEEeeeccCceeEeeecccce--eeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEE
Confidence 9999999999999988876543 3347899999999999888 68999954 466779999999999987 7789999
Q ss_pred EeCCCeEEEEecCCCeeEeee---ecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEEc
Q 009274 480 GGWDKTVSVQELAGDEFEEDV---IPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 480 gs~dg~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~~ 536 (538)
|+++|.+.+||.+++...+.. ...+.+....-+.+.+++ ..+|++|..|.+|++|+-
T Consensus 377 G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~ke 438 (460)
T KOG0285|consen 377 GGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKE 438 (460)
T ss_pred cCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEec
Confidence 999999999999987644332 334444455556666665 567999999999999974
No 8
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=252.55 Aligned_cols=286 Identities=24% Similarity=0.382 Sum_probs=223.6
Q ss_pred EEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCC-----CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 243 VKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLK-----DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~-----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
+..-++++|.+.|+.++.. .+.+++++.|.++.+|++. .|..++.+++|+..|..++.+++ +.++++++.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~d-g~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSD-GNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccC-CceEEecccc
Confidence 4455799999999999997 7899999999999999874 47788999999999999999885 5578999999
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEeC
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVCN 392 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~~ 392 (538)
+++++||+.+++.. ..+..|.. . ....++++|.+.+++|+.|.+|++||+.. .+..++.. +.+.|+|+.|++
T Consensus 85 ~~lrlWDl~~g~~t---~~f~GH~~-d-Vlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 85 GTLRLWDLATGEST---RRFVGHTK-D-VLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred ceEEEEEecCCcEE---EEEEecCC-c-eEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcC
Confidence 99999999987433 33333332 1 22458889999999999999999999865 44444433 378999999993
Q ss_pred C----EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCccee-eeccccceE
Q 009274 393 G----VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK-SMQTHKGSV 467 (538)
Q Consensus 393 ~----~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~h~~~v 467 (538)
+ ++++++.|+++++||+++.+....+.+| .+.+.. +.++|||...++|+.||.+.+||+++... ....|...|
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh-~~~v~t-~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v 236 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH-SGYVNT-VTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIV 236 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhccccc-cccEEE-EEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeE
Confidence 3 8999999999999999999988888776 344444 69999999999999999999999765333 334588899
Q ss_pred EEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCccc----CCCceEEEEE-eCCE-EEEEECCCeEEEEEcC
Q 009274 468 FAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIP----CGSVITALLY-WQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 468 ~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~~~ 537 (538)
.+++| -.++.+....+..|+|||++++.....+......+ .......++| .+|. |++|-.|+.|++|.+.
T Consensus 237 ~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 237 NSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 99998 44555555566779999999887665544433222 1223334444 4554 9999999999999875
No 9
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.6e-35 Score=263.95 Aligned_cols=370 Identities=19% Similarity=0.287 Sum_probs=271.6
Q ss_pred hcCccchHHHHHhhhhccCCCCCcchh---hHHHHHHHhhcCCCccccccccCcccCcccchhhhccccccCcccccccc
Q 009274 130 FGSEFVSLQLMFCQCLNFDPGCRPLLT---NVWKCIRELIIKPEFDKMIRFAGPVNLENENHCLVLGELSCLPKERLETE 206 (538)
Q Consensus 130 ~~~~~~~l~~~~~~~l~~~p~~r~~~~---~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (538)
++.+|.+-.+-+ ++...|..-|... ++...+++++ +.........+|+|++.+++.+.+...+-
T Consensus 8 vqvrF~Tk~e~~--aVpD~p~~iP~~~~r~gLs~ivN~ll---------~se~~~~K~~pFDFLi~gelLRtsL~e~l-- 74 (423)
T KOG0313|consen 8 VQVRFFTKNEDY--AVPDVPFAIPTSVERYGLSNIVNKLL---------KSENGFWKPVPFDFLIKGELLRTSLDEHL-- 74 (423)
T ss_pred EEEEEEeccccc--CCCCcceeccCcceEccHHHHHHHHH---------hccCCcCCCCcceEEEcceeeeccHHHHH--
Confidence 344444443333 5666677767753 4555556655 23444556789999999999998876532
Q ss_pred chhhhcCCCCCCCccceeeeeccCcceeEEeecCCeEEEEEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 207 DKDELLGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
.+...+.+.. - .-.++.+..... .+. ---|.+.|.++...+++++||++||.+++||. .|+...
T Consensus 75 -~~kgiSsE~~--l----------eIEYv~~~~aP~-pl~-~~~hdDWVSsv~~~~~~IltgsYDg~~riWd~-~Gk~~~ 138 (423)
T KOG0313|consen 75 -EEKGISSEEI--L----------EIEYVEAITAPK-PLQ-CFLHDDWVSSVKGASKWILTGSYDGTSRIWDL-KGKSIK 138 (423)
T ss_pred -HHcCcChhhe--e----------EEEEEEecCCCC-ccc-cccchhhhhhhcccCceEEEeecCCeeEEEec-CCceEE
Confidence 2222222221 0 111222222211 122 23499999999999999999999999999996 589999
Q ss_pred EEecCCcCeEEEEEecC--CCCEEEEEcCCCcEEEEEccCCCCCcceeee-cccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 287 TFKGHDHKVMAVVYVDE--DQPLCISGDSGGGIFVWSFSFPLGHEPLKKW-NEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
++.+|.++|.+++|... ....|++++.|.++++|.++.+......... .+|. ......+..+++..+++|+.|.+
T Consensus 139 ~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk--~~V~sVsv~~sgtr~~SgS~D~~ 216 (423)
T KOG0313|consen 139 TIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHK--RSVDSVSVDSSGTRFCSGSWDTM 216 (423)
T ss_pred EEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccc--cceeEEEecCCCCeEEeecccce
Confidence 99999999999998743 3347899999999999999876543322222 1222 22223456678889999999999
Q ss_pred EEEEECCC-------------------------CceeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEE
Q 009274 364 IKAWSLLD-------------------------GTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTV 417 (538)
Q Consensus 364 i~iwd~~~-------------------------~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~ 417 (538)
|++|+..+ +.++.++.+|..+|.++.|+ ...+++++.|.+|+.||+.++....+
T Consensus 217 lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~ 296 (423)
T KOG0313|consen 217 LKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKST 296 (423)
T ss_pred eeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceee
Confidence 99999321 23566788999999999999 66999999999999999999999888
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-----ceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEE
Q 009274 418 LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-----FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iw 489 (538)
+.... ...++..+|..++|++|+.|..+++||.++ ..+++.+|++.|.++.| +...|++|+.|+++++|
T Consensus 297 ~~~~k---sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klW 373 (423)
T KOG0313|consen 297 LTTNK---SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLW 373 (423)
T ss_pred eecCc---ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEE
Confidence 87643 344468899999999999999999999664 56788999999999987 77899999999999999
Q ss_pred ecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEcC
Q 009274 490 ELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 490 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
|+++.+-....... +..-+.++.|.++ .+++|+.|.+|++++..
T Consensus 374 DvRS~k~plydI~~----h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 374 DVRSTKAPLYDIAG----HNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EeccCCCcceeecc----CCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 99987622222222 4556777777766 68899999999999753
No 10
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.2e-34 Score=248.57 Aligned_cols=279 Identities=18% Similarity=0.267 Sum_probs=230.7
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..|+||.+.|.++.|+ .++++++|.||.+.|||.-+...++.++-....|..++|+| .++++++|+.|....||++.
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sP-Sg~~VAcGGLdN~Csiy~ls 127 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSP-SGNFVACGGLDNKCSIYPLS 127 (343)
T ss_pred EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECC-CCCeEEecCcCceeEEEecc
Confidence 5699999999999999 89999999999999999999999999999999999999999 45688999999999999998
Q ss_pred CCCCC---cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEE
Q 009274 324 FPLGH---EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYS 397 (538)
Q Consensus 324 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s 397 (538)
+.... ...+.+..|.. +.+++.|.. ...|+|++.|.++.+||+++++.+..|.+|.+.|.+++++ ++.+++
T Consensus 128 ~~d~~g~~~v~r~l~gHtg--ylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvS 204 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAGHTG--YLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVS 204 (343)
T ss_pred cccccccceeeeeecCccc--eeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEe
Confidence 66333 22233333333 233333433 6689999999999999999999999999999999999998 469999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecc--ccceEEEEEe-
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT--HKGSVFAVFL- 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~--h~~~v~~~~~- 472 (538)
|+.|++.++||+|.+.++++|.+|... +.. +.|.|+|.-+++|+.|++.++||++. .+..+.. -..+|++++|
T Consensus 205 g~cD~~aklWD~R~~~c~qtF~ghesD-INs-v~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS 282 (343)
T KOG0286|consen 205 GGCDKSAKLWDVRSGQCVQTFEGHESD-INS-VRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS 282 (343)
T ss_pred cccccceeeeeccCcceeEeecccccc-cce-EEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence 999999999999999999999988554 344 69999999999999999999999775 4444442 3357788888
Q ss_pred -CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE-EeCCE-EEEEECCCeEEEEE
Q 009274 473 -EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL-YWQGK-LFVGCADRTVKVYY 535 (538)
Q Consensus 473 -~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~sg~~dg~v~vw~ 535 (538)
.|++|+.|..|.++.+||.-.++....+.. |...++++- .+||. +.+|+.|.+++||.
T Consensus 283 ~SGRlLfagy~d~~c~vWDtlk~e~vg~L~G-----HeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 283 KSGRLLFAGYDDFTCNVWDTLKGERVGVLAG-----HENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccccEEEeeecCCceeEeeccccceEEEeec-----cCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 899999999999999999987775554442 334555554 45776 77899999999994
No 11
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.9e-36 Score=267.95 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=226.1
Q ss_pred cCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEE
Q 009274 229 GGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVV 299 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 299 (538)
-++..+++|+.+..+++|+ +.||++.|.|+.|..+.+++||.|.+|++||+++++++.++-+|...|..+.
T Consensus 205 YDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlr 284 (499)
T KOG0281|consen 205 YDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLR 284 (499)
T ss_pred ecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEE
Confidence 3577899999999999998 6799999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec
Q 009274 300 YVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (538)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 379 (538)
|+ +.++++++.|.++.+||+..+..........++. ..+..+..+.+++++++.|.+|++|++.+++.+.++.
T Consensus 285 f~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHr----AaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~ 357 (499)
T KOG0281|consen 285 FS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHR----AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN 357 (499)
T ss_pred Ee---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhh----hheeeeccccceEEEecCCceEEEEeccceeeehhhh
Confidence 95 4588999999999999999876544444444433 3466778889999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc----
Q 009274 380 GHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK---- 455 (538)
Q Consensus 380 ~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---- 455 (538)
+|...|-|+.+.+.++++||.|.+|++||+..|.+++.+++|.. .+. ++-.|.+.+++|+.||+|++||...
T Consensus 358 gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe-LvR---ciRFd~krIVSGaYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 358 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVR---CIRFDNKRIVSGAYDGKIKVWDLQAALDP 433 (499)
T ss_pred cccccceehhccCeEEEecCCCceEEEEeccccHHHHHHhchHH-hhh---heeecCceeeeccccceEEEEecccccCC
Confidence 99999999999999999999999999999999999999988754 332 3445678999999999999999542
Q ss_pred -------ceeeeccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCee
Q 009274 456 -------FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEF 496 (538)
Q Consensus 456 -------~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~ 496 (538)
++..+..|.+.|..+.||...+++++.|.+|-|||+.++..
T Consensus 434 ra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 434 RAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred cccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCCCc
Confidence 45566779999999999999999999999999999977653
No 12
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.6e-33 Score=237.54 Aligned_cols=265 Identities=22% Similarity=0.352 Sum_probs=212.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCcee
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY 342 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 342 (538)
-+|+|+|.|.+||+|...+|.+..+++...+.|+.+...|+...+ ++++ ...|++||+++.... ++..+..+.. .
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~L-Aaa~-~qhvRlyD~~S~np~-Pv~t~e~h~k--N 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDL-AAAG-NQHVRLYDLNSNNPN-PVATFEGHTK--N 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchh-hhcc-CCeeEEEEccCCCCC-ceeEEeccCC--c
Confidence 469999999999999999999999999888999999999966544 4444 478999999987654 5555555533 1
Q ss_pred eeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCceeEEEec
Q 009274 343 SGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTVLEE 420 (538)
Q Consensus 343 ~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 420 (538)
.....|..+|+.+++|++||+++|||++...+-+.+. |..+|+++..++ ..|++|..+|.|++||+.+..+...+..
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP 164 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP 164 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC
Confidence 2345788899999999999999999999966666655 789999999993 4999999999999999999887777765
Q ss_pred CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--------cceeeeccccceEEEE--EeCCCEEEEEeCCCeEEEEe
Q 009274 421 DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--------~~~~~~~~h~~~v~~~--~~~~~~l~sgs~dg~v~iwd 490 (538)
... .....+.+.|||.+++.+...|..++|++- .++.+++.|.+-+..+ +||+++|+++|.|.+++||+
T Consensus 165 e~~-~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn 243 (311)
T KOG0315|consen 165 EDD-TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWN 243 (311)
T ss_pred CCC-cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEe
Confidence 544 334447999999999999999999999842 2567788999988776 45999999999999999999
Q ss_pred cCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 491 LAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
.++. +.......+. ...+..++|+.|+. |++|+.|+.+++|+++
T Consensus 244 ~~~~-~kle~~l~gh--~rWvWdc~FS~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 244 TDDF-FKLELVLTGH--QRWVWDCAFSADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred cCCc-eeeEEEeecC--CceEEeeeeccCccEEEecCCCCceeecccc
Confidence 9988 2222222221 23455566666665 8899999999999985
No 13
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=239.03 Aligned_cols=263 Identities=18% Similarity=0.290 Sum_probs=224.8
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC------c
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF------S 283 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~------~ 283 (538)
.|.....+.+.+.+++++.+|++.+|+. .--..+|..++|+ ++++|+|+-|+...||++.+. +
T Consensus 57 Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~ 136 (343)
T KOG0286|consen 57 KIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVR 136 (343)
T ss_pred ceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccce
Confidence 4778888999999999999999999983 2345789999998 999999999999999999854 4
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCC
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDR 362 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg 362 (538)
..+.+.+|++.+.++.|.+ ...+++++.|.+..+||+++++... .+..|... . ..++++| +++.+++|+.|+
T Consensus 137 v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~---~f~GH~gD-V-~slsl~p~~~ntFvSg~cD~ 209 (343)
T KOG0286|consen 137 VSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQ---VFHGHTGD-V-MSLSLSPSDGNTFVSGGCDK 209 (343)
T ss_pred eeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEE---EecCCccc-E-EEEecCCCCCCeEEeccccc
Confidence 4567899999999999986 3357999999999999999875443 34444332 1 1346677 889999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 009274 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (538)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 440 (538)
..++||++.+.++++|.+|.+.|+++.|. +.-+++|+.|++.++||+|..+.+..+...........++|+..|++|+
T Consensus 210 ~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLf 289 (343)
T KOG0286|consen 210 SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLF 289 (343)
T ss_pred ceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEE
Confidence 99999999999999999999999999999 4589999999999999999999988887655444445579999999999
Q ss_pred EEeCCCcEEEEeC--CcceeeeccccceEEEEE--eCCCEEEEEeCCCeEEEEe
Q 009274 441 VSHESGSIKVWRN--DKFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 441 ~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~--~~~~~l~sgs~dg~v~iwd 490 (538)
+|..|.++.+||. .+....+.+|.+.|.|+. +||..++|||+|.++|||.
T Consensus 290 agy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 290 AGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 9999999999994 456778899999999985 5999999999999999994
No 14
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=5.3e-32 Score=249.10 Aligned_cols=299 Identities=19% Similarity=0.248 Sum_probs=240.6
Q ss_pred ceeeeeccCcc-eeEEeecCCeEEEEEeec-------------------C----CCcEEEEEEc--CCEEEEEeCCCcEE
Q 009274 222 IDQARAAGGVK-DLVNGLSKGNVKFKDLQG-------------------H----RDCVTGLAVG--GGFLFSSSFDKSIH 275 (538)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~-------------------h----~~~V~~l~~~--~~~l~s~s~dg~i~ 275 (538)
+......+... .++++..+...++|++.. + ...|++++|+ |..||+|+.||.++
T Consensus 181 V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~r 260 (524)
T KOG0273|consen 181 VFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEAR 260 (524)
T ss_pred eEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEE
Confidence 33344444444 566677777778887642 2 2589999999 99999999999999
Q ss_pred EEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec-CCE
Q 009274 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRY 354 (538)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 354 (538)
+|+. +|..+.++..|.++|.++.|+. .+.++++++.|+++.+||..++.....+..... ....+.+. ...
T Consensus 261 iw~~-~G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~-------~~lDVdW~~~~~ 331 (524)
T KOG0273|consen 261 IWNK-DGNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSA-------PALDVDWQSNDE 331 (524)
T ss_pred EEec-CchhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeeccC-------CccceEEecCce
Confidence 9995 5788889999999999999977 455889999999999999876654433332211 12234443 448
Q ss_pred EEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 009274 355 LYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (538)
Q Consensus 355 l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (538)
+++++.|+.|+++.+....++.++.+|.++|.++.|+ +.+|+++|.|++++||++........+..|.... .+ +.|
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei-~t-~~w 409 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEI-YT-IKW 409 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccce-ee-Eee
Confidence 9999999999999999999999999999999999999 6799999999999999999888888888775433 33 577
Q ss_pred cCCC---------CEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEee
Q 009274 433 TAVQ---------HTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (538)
Q Consensus 433 ~~~~---------~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~ 499 (538)
+|.| ..+++++.|++|++||. +.++..+..|+.+|++++| +|+++++|+.||.|.+|+..++++...
T Consensus 410 sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s 489 (524)
T KOG0273|consen 410 SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKS 489 (524)
T ss_pred cCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEe
Confidence 7654 47999999999999994 5688899999999999987 899999999999999999999988766
Q ss_pred eecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEEcC
Q 009274 500 VIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~~~ 537 (538)
.... ..+..++|+ ++++.++-.||.+.+-|+.
T Consensus 490 ~~~~------~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 490 YQGT------GGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ecCC------CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 5533 245666665 5567788899999999875
No 15
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=5.8e-31 Score=226.16 Aligned_cols=289 Identities=19% Similarity=0.290 Sum_probs=223.2
Q ss_pred eEEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC---CceEEEE-ecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 242 NVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD---FSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~---~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
-+.+..+++|.+.|..++|+ |..||||+.|+.|++|+... ..+...+ .+|+..|.+++|+|.++ +|++++.|
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~-~La~aSFD 82 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGR-YLASASFD 82 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCc-EEEEeecc
Confidence 34677899999999999999 34899999999999999875 3334344 36999999999999655 88999999
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEe
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG---TLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~ 391 (538)
.++.||.-..+. -..+..+.+|.. ...+.+++.+|++|++++.|+.|-+|.+..+ ++...++.|...|..+.|+
T Consensus 83 ~t~~Iw~k~~~e-fecv~~lEGHEn--EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH 159 (312)
T KOG0645|consen 83 ATVVIWKKEDGE-FECVATLEGHEN--EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH 159 (312)
T ss_pred ceEEEeecCCCc-eeEEeeeecccc--ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEc
Confidence 999999755332 122334444432 2335688999999999999999999998744 5778889999999999999
Q ss_pred C--CEEEEEecCCcEEEEECCC---CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccccce
Q 009274 392 N--GVLYSGSRDGTIRLWSLSD---HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGS 466 (538)
Q Consensus 392 ~--~~l~s~s~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~ 466 (538)
+ ++|+++|.|++|++|+-.. -.+.+++..++. . .-++.|++.|..|++++.|++++||..... .-..|...
T Consensus 160 Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~-T-VW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~--~~~~~sr~ 235 (312)
T KOG0645|consen 160 PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN-T-VWSLAFDNIGSRLVSCSDDGTVSIWRLYTD--LSGMHSRA 235 (312)
T ss_pred CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccc-e-EEEEEecCCCceEEEecCCcceEeeeeccC--cchhcccc
Confidence 5 7999999999999998762 356888877754 3 334799999999999999999999984421 11347889
Q ss_pred EEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeee--ecCCcccCCCceEEEEEe---CCEEEEEECCCeEEEEEcCC
Q 009274 467 VFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDV--IPTGAIPCGSVITALLYW---QGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 467 v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~v~vw~~~~ 538 (538)
+..+.|+...|++++.|+.|++|.-......... .......|+.-++++.+. .++|++|+.||.|++|.+.+
T Consensus 236 ~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~~ 312 (312)
T KOG0645|consen 236 LYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELEI 312 (312)
T ss_pred eEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEecC
Confidence 9999999889999999999999987643211111 111112244456666665 46799999999999999853
No 16
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=1e-33 Score=261.34 Aligned_cols=281 Identities=15% Similarity=0.232 Sum_probs=231.6
Q ss_pred eEEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC-CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 317 (538)
...+.++.||+..|+++.|. +.+|++++.|+.|+||++-+ +++++++.+|..+|.+++|++++. .+++++.|+.+
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~-~fLS~sfD~~l 282 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGT-SFLSASFDRFL 282 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCC-eeeeeecceee
Confidence 34567899999999999998 89999999999999999865 899999999999999999988555 56899999999
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCE
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGV 394 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~ 394 (538)
++||+++++....+..- ....+..+.|++ +.+++|+.|+.|+.||+++++.++++..|-+.|..+.|- +..
T Consensus 283 KlwDtETG~~~~~f~~~------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHLD------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRR 356 (503)
T ss_pred eeeccccceEEEEEecC------CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCce
Confidence 99999998765554432 333467888888 699999999999999999999999999999999999998 569
Q ss_pred EEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-----cceeeeccccceEEE
Q 009274 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-----KFMKSMQTHKGSVFA 469 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~h~~~v~~ 469 (538)
+++.+.|+++++|+.+....+...... ......++..+|+++++++-+.|+.|.+|.+. +..+.+++|..+=.+
T Consensus 357 FissSDdks~riWe~~~~v~ik~i~~~-~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys 435 (503)
T KOG0282|consen 357 FISSSDDKSVRIWENRIPVPIKNIADP-EMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYS 435 (503)
T ss_pred EeeeccCccEEEEEcCCCccchhhcch-hhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCce
Confidence 999999999999999988776555433 22333447899999999999999999999844 345677888654433
Q ss_pred E----EeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe---CCEEEEEECCCeEEEEE
Q 009274 470 V----FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW---QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 470 ~----~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~v~vw~ 535 (538)
+ ++||.+|++|+.||.+.+||.++-++...... +..++..+.|. .+.+++|+.||.|++|+
T Consensus 436 ~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka-----h~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 436 CQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA-----HDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc-----CCcceEEEEecCCCcceeEecccCceeEecC
Confidence 3 45999999999999999999998876554443 22344555554 45699999999999996
No 17
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-31 Score=227.33 Aligned_cols=241 Identities=24% Similarity=0.438 Sum_probs=194.4
Q ss_pred EEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 243 VKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
..++.|+||...|..+..+ +++.++++.|+++++||+.+++..+.|.+|...|.+++|++++. .+++|+.|.+|++|
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~-qivSGSrDkTiklw 132 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNR-QIVSGSRDKTIKLW 132 (315)
T ss_pred ceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCc-eeecCCCcceeeee
Confidence 3455688999999999998 99999999999999999999999999999999999999998554 66999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLY 396 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~ 396 (538)
++-... .. ............+..|+|+ ..+|++++.|++|++||+++.+....+.+|++.++.++++ +.+++
T Consensus 133 nt~g~c---k~-t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslca 208 (315)
T KOG0279|consen 133 NTLGVC---KY-TIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCA 208 (315)
T ss_pred eecccE---EE-EEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEe
Confidence 986431 11 1111111345567788998 4599999999999999999999999999999999999999 45999
Q ss_pred EEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeee----ccc-----cc
Q 009274 397 SGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSM----QTH-----KG 465 (538)
Q Consensus 397 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~----~~h-----~~ 465 (538)
+|+.||.+.+||++.++.+..+... . ....++|+|+.-.|+.+.. ..|+|||+.. .+..+ .+. ..
T Consensus 209 sGgkdg~~~LwdL~~~k~lysl~a~--~-~v~sl~fspnrywL~~at~-~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~ 284 (315)
T KOG0279|consen 209 SGGKDGEAMLWDLNEGKNLYSLEAF--D-IVNSLCFSPNRYWLCAATA-TSIKIWDLESKAVVEELKLDGIGPSSKAGDP 284 (315)
T ss_pred cCCCCceEEEEEccCCceeEeccCC--C-eEeeEEecCCceeEeeccC-CceEEEeccchhhhhhccccccccccccCCc
Confidence 9999999999999999998887643 2 3445799998877766654 4699999543 22222 122 22
Q ss_pred eEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 466 SVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 466 ~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
...+++| ||..|++|-.|+.|++|.+.
T Consensus 285 ~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 285 ICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 3344555 89999999999999999875
No 18
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.8e-32 Score=242.45 Aligned_cols=280 Identities=22% Similarity=0.309 Sum_probs=231.2
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
...+.||..+|+.+-|+ -..+++++.|++|++||..+++....+++|.+.|.+++|.. .+.++++++.|-.+++||.
T Consensus 101 ~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a-~Gk~l~tcSsDl~~~LWd~ 179 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDA-SGKYLATCSSDLSAKLWDF 179 (406)
T ss_pred hhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEec-CccEEEecCCccchhheeH
Confidence 35578899999999999 56677888899999999999999999999999999999987 4578899999999999998
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR 400 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~ 400 (538)
.+. -..++....+. +..+..++-|.|+++++++.|.+|+.|++.++.++.++.+|...|..++.+ +..+++|+.
T Consensus 180 ~~~--~~c~ks~~gh~--h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~ 255 (406)
T KOG0295|consen 180 DTF--FRCIKSLIGHE--HGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSN 255 (406)
T ss_pred HHH--HHHHHHhcCcc--cceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCC
Confidence 752 12222222222 444566888899999999999999999999999999999999999999999 448899999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC---------------CCEEEEEeCCCcEEEEe--CCcceeeeccc
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV---------------QHTLVVSHESGSIKVWR--NDKFMKSMQTH 463 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~~~~~dg~i~iwd--~~~~~~~~~~h 463 (538)
|.++++|-+.++++...+..|.. ..-+++|.|. +.++.+++.|++|++|| ++.++.++.+|
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh--~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh 333 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEH--PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH 333 (406)
T ss_pred CceEEEEEeccchhhhhhhcccc--ceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc
Confidence 99999999999977766665532 2222344322 35899999999999999 55688999999
Q ss_pred cceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEEEECCCeEEEEEc
Q 009274 464 KGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKVYYY 536 (538)
Q Consensus 464 ~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~~dg~v~vw~~ 536 (538)
..+|..+++ .|++|+++.+|+++++||+++.++...... +...++++.++.. ++++|+-|-++++|.-
T Consensus 334 dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a-----h~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 334 DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA-----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC-----CcceeEEEecCCCCceEEeccccceeeeeec
Confidence 999999987 699999999999999999999987665543 3446777777744 5888999999999973
No 19
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.5e-31 Score=225.09 Aligned_cols=278 Identities=15% Similarity=0.260 Sum_probs=224.0
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
..++..+..|.++|.++.|+ |+|.++++.|++|++|+...+.+++++.+|...|..++.+.++. -+++|+.|..+.+
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dns-kf~s~GgDk~v~v 85 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNS-KFASCGGDKAVQV 85 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccccccc-ccccCCCCceEEE
Confidence 44667789999999999999 99999999999999999999999999999999999999887555 5699999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC--CceeEEecCCCCCeEEEEEeCCEEEE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD--GTLSCTMSGHKSAVSTLAVCNGVLYS 397 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~~l~s 397 (538)
||+++++....+...... .. ...|..+...+++|+.|.++++||.++ .++++.+....+.|.++...+..+++
T Consensus 86 wDV~TGkv~Rr~rgH~aq----VN-tV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIva 160 (307)
T KOG0316|consen 86 WDVNTGKVDRRFRGHLAQ----VN-TVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVA 160 (307)
T ss_pred EEcccCeeeeecccccce----ee-EEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEe
Confidence 999998765555443222 11 235555566999999999999999976 46888888889999999999999999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEE--e-
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF--L- 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~--~- 472 (538)
|+.||+++.||++.|+......++ ...+++++++++..++++.|+++++.| +++.++.+++|.+.-..+. +
T Consensus 161 GS~DGtvRtydiR~G~l~sDy~g~----pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~ 236 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTLSSDYFGH----PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLN 236 (307)
T ss_pred eccCCcEEEEEeecceeehhhcCC----cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeec
Confidence 999999999999999876665433 344579999999999999999999998 6789999999988765543 3
Q ss_pred -CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeC--CEEEEEECCCeEEEE
Q 009274 473 -EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKVY 534 (538)
Q Consensus 473 -~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~v~vw 534 (538)
....+++|++||.|++||+.+......+.... ...+..+.+.. ..|+++...+ +..|
T Consensus 237 qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~----~v~v~dl~~hp~~~~f~~A~~~~-~~~~ 296 (307)
T KOG0316|consen 237 QSDTHVFSGSEDGKVYFWDLVDETQISKLSVVS----TVIVTDLSCHPTMDDFITATGHG-DLFW 296 (307)
T ss_pred ccceeEEeccCCceEEEEEeccceeeeeeccCC----ceeEEeeecccCccceeEecCCc-eece
Confidence 66789999999999999999888766555432 22244454442 3366655444 3444
No 20
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=6.7e-32 Score=263.94 Aligned_cols=231 Identities=26% Similarity=0.415 Sum_probs=204.1
Q ss_pred CCccceeeeeccCcceeEEeecCCeEEEEEe----------------------------------------ecCCCcEEE
Q 009274 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL----------------------------------------QGHRDCVTG 257 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l----------------------------------------~~h~~~V~~ 257 (538)
....+.++.++.+...++.|..+..+++|.+ .||.++|..
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 3456788999999999999999999888874 369999999
Q ss_pred EEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeec
Q 009274 258 LAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN 335 (538)
Q Consensus 258 l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 335 (538)
+.|+ .++|+++|.|++||+|.+.+..++..+++|..+|+++.|+| .+.+|+|++.|++.++|..........+.
T Consensus 457 ~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifa--- 532 (707)
T KOG0263|consen 457 CSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFA--- 532 (707)
T ss_pred eeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhc---
Confidence 9999 89999999999999999999999999999999999999998 57799999999999999988644333333
Q ss_pred ccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc
Q 009274 336 EEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS 413 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~ 413 (538)
.+.. -..++.|+|+.+++++||.|.+|++||+.+|..++.|.||.++|.+++|+ +.+|++|+.||.|.+||+.+++
T Consensus 533 ghls--DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 533 GHLS--DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred cccc--ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence 3321 22367999999999999999999999999999999999999999999999 6799999999999999999999
Q ss_pred eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc
Q 009274 414 LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF 456 (538)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 456 (538)
.+..+..| .+.+.+ +.|+.+|..|++|+.|++|++||..+.
T Consensus 611 ~v~~l~~H-t~ti~S-lsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 611 LVKQLKGH-TGTIYS-LSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred chhhhhcc-cCceeE-EEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999988 555555 799999999999999999999996543
No 21
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=2.6e-31 Score=231.47 Aligned_cols=266 Identities=20% Similarity=0.292 Sum_probs=226.7
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEE----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
...|..+.|.+++..++++..|..+.+|+ +++|+++|..+.|. ++.+++++.|.+|+.||+++|+.++
T Consensus 47 ~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~r 126 (338)
T KOG0265|consen 47 KGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIR 126 (338)
T ss_pred cceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeee
Confidence 45688999999999999999999999998 68999999999998 9999999999999999999999999
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
.+++|...|+++.-+.-+..++.+++.||++++||+++....+...... .....+|.-.+..+.+|+-|+.|++
T Consensus 127 k~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky------qltAv~f~d~s~qv~sggIdn~ikv 200 (338)
T KOG0265|consen 127 KHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY------QLTAVGFKDTSDQVISGGIDNDIKV 200 (338)
T ss_pred hhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce------eEEEEEecccccceeeccccCceee
Confidence 9999999999999777788899999999999999999655444432211 1112355556779999999999999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC----ceeEEEecCCCCc--eEEEEEEcCCCCE
Q 009274 367 WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH----SLLTVLEEDSSGA--VSSVLSLTAVQHT 438 (538)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~ 438 (538)
||++.+.....+.||.++|+.+..+ +.++++-+.|.++++||++-. +++..+.++.... ....++|+|++..
T Consensus 201 Wd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~ 280 (338)
T KOG0265|consen 201 WDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTK 280 (338)
T ss_pred eccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCc
Confidence 9999999999999999999999999 679999999999999999853 3466665543221 1222589999999
Q ss_pred EEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 439 LVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 439 l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
+.+|+.|+.+++||. +..+..+.+|.+.|.++.| ....|.+++.|.+|++=.
T Consensus 281 i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 281 ITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred cccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 999999999999994 4688999999999999987 788999999999998743
No 22
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=5.9e-33 Score=250.97 Aligned_cols=267 Identities=20% Similarity=0.360 Sum_probs=225.6
Q ss_pred CCCCccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCce
Q 009274 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSH 284 (538)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~ 284 (538)
+.-..+|+.+...++++++++++..|...+|+ ++.|..+|+++.|+ +.+++||+.+|.|++|+..- ..
T Consensus 93 NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-nn 171 (464)
T KOG0284|consen 93 NKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM-NN 171 (464)
T ss_pred cccccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch-hh
Confidence 33445688899999999999999999999998 46899999999998 99999999999999999754 44
Q ss_pred EEEEecC-CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 285 VHTFKGH-DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 285 ~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
++.++.| ...|.+++|+|++. .|++++.||+|+|||....+....+.. +++.. .++.++|....+++|+.|..
T Consensus 172 Vk~~~ahh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~kee~vL~G----HgwdV-ksvdWHP~kgLiasgskDnl 245 (464)
T KOG0284|consen 172 VKIIQAHHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKEERVLRG----HGWDV-KSVDWHPTKGLIASGSKDNL 245 (464)
T ss_pred hHHhhHhhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCchhheecc----CCCCc-ceeccCCccceeEEccCCce
Confidence 5555555 49999999999554 669999999999999987776665533 22222 24578888889999999999
Q ss_pred EEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEE
Q 009274 364 IKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLV 440 (538)
Q Consensus 364 i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 440 (538)
|++||.++++++.++.+|+..|..+.|+ +++|+++|.|..++++|+++.+.+..++.|.... .+ +.|+| +..+|.
T Consensus 246 VKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv-~~-~~WhP~~~~lft 323 (464)
T KOG0284|consen 246 VKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDV-TS-LTWHPLNESLFT 323 (464)
T ss_pred eEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhh-ee-ecccccccccee
Confidence 9999999999999999999999999999 6799999999999999999999999998876543 33 56776 567899
Q ss_pred EEeCCCcEEEEeCC--cceeee-ccccceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 441 VSHESGSIKVWRND--KFMKSM-QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 441 ~~~~dg~i~iwd~~--~~~~~~-~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
+|+.||.|..|... +++-.+ .+|...|+++++ -|..|++|+.|.++++|.-
T Consensus 324 sgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 324 SGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred eccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 99999999999854 444443 569999999987 7999999999999999964
No 23
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.4e-30 Score=248.38 Aligned_cols=309 Identities=20% Similarity=0.294 Sum_probs=250.4
Q ss_pred CCccceeeeeccCcceeEEeecCCeEEEEEee------------------------c-------------------CCCc
Q 009274 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ------------------------G-------------------HRDC 254 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~------------------------~-------------------h~~~ 254 (538)
....+....+..+...+++-+.+|.+.+|++. + ....
T Consensus 188 Hkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~k 267 (893)
T KOG0291|consen 188 HKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSK 267 (893)
T ss_pred CCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccc
Confidence 33456667777777888888888888888765 1 1257
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (538)
|+|.+|+ -+.|++|-..|...+|++.+...++.+.-...+|..++|+..+..+.+.++.-|.+-||++.+..-.-..+
T Consensus 268 vtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ 347 (893)
T KOG0291|consen 268 VTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ 347 (893)
T ss_pred eeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc
Confidence 8899999 67889999999999999999999999998889999999988777666666677999999998654322222
Q ss_pred eecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECC
Q 009274 333 KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 410 (538)
.| .....+.+.+|||+++++|+.||.|++||..++-|..++..|++.|+.+.|+ ++.+++.|.||+|+.||+.
T Consensus 348 ---gH--~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 348 ---GH--SDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred ---cc--ccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 11 1334467899999999999999999999999999999999999999999999 7799999999999999999
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC-cEEEEe--CCcceeeeccccceEEEEEe--CCCEEEEEeCCCe
Q 009274 411 DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG-SIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKT 485 (538)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd--~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~ 485 (538)
..+..+++..+.+.. ..+++..|.|..+++|+.|. .|.+|+ +++.+..+.+|.++|.++++ ++..|+++|+|.+
T Consensus 423 RYrNfRTft~P~p~Q-fscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 423 RYRNFRTFTSPEPIQ-FSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred ccceeeeecCCCcee-eeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccce
Confidence 999999998875544 44578999999999998875 589998 66789999999999998765 8999999999999
Q ss_pred EEEEecCCCeeEe-eeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 486 VSVQELAGDEFEE-DVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 486 v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
||+||+-...-.. .... ...+....+.|+|. +++++.||.|.+||.+
T Consensus 502 VRiW~if~s~~~vEtl~i-----~sdvl~vsfrPdG~elaVaTldgqItf~d~~ 550 (893)
T KOG0291|consen 502 VRIWDIFSSSGTVETLEI-----RSDVLAVSFRPDGKELAVATLDGQITFFDIK 550 (893)
T ss_pred EEEEEeeccCceeeeEee-----ccceeEEEEcCCCCeEEEEEecceEEEEEhh
Confidence 9999996552111 1111 12234445556665 9999999999999975
No 24
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.5e-32 Score=248.37 Aligned_cols=275 Identities=23% Similarity=0.307 Sum_probs=224.8
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
.-+.+|..+.|. |+.|++|+..|.+.+|+..+......++.|..+|.++.|++ ++..+++|+.+|.|++|+....
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpnmn-- 170 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPNMN-- 170 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEcc-CCCEEEEcCCCceEEecccchh--
Confidence 345789999999 89999999999999999866555556678999999999998 4557799999999999987632
Q ss_pred CcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEE
Q 009274 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIR 405 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~ 405 (538)
.++....++. .....++|+|+...++++++||+|+|||....+....+.+|.-.|.+++|+ .+++++||.|..|+
T Consensus 171 --nVk~~~ahh~-eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 171 --NVKIIQAHHA-EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK 247 (464)
T ss_pred --hhHHhhHhhh-hhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence 2223333332 222356889988899999999999999999999988999999999999999 56999999999999
Q ss_pred EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe---CCCEEEEE
Q 009274 406 LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFTG 480 (538)
Q Consensus 406 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~---~~~~l~sg 480 (538)
+||.++++++.++..|.. .+.. +.|++++++|++++.|..++++|++ +.++.+++|...++++.| ...+|.+|
T Consensus 248 lWDprSg~cl~tlh~HKn-tVl~-~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 248 LWDPRSGSCLATLHGHKN-TVLA-VKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred eecCCCcchhhhhhhccc-eEEE-EEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeec
Confidence 999999999999987743 3333 6899999999999999999999977 467888999999999976 88999999
Q ss_pred eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEECCCeEEEEEc
Q 009274 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~~ 536 (538)
+.||.|..|.+...+....... .+...+..+.+ |=|+ |++|+.|.++++|.=
T Consensus 326 g~Dgsvvh~~v~~~~p~~~i~~----AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLEEPLGEIPP----AHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cCCCceEEEeccccccccCCCc----ccccceeeeeccccceeEeecCCCcceeeecc
Confidence 9999999999985443322222 24445555555 4455 667999999999963
No 25
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.2e-31 Score=236.61 Aligned_cols=263 Identities=22% Similarity=0.389 Sum_probs=228.0
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC-CceEEEE
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-FSHVHTF 288 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~ 288 (538)
.+..+.+.+....+++++.+..+++|+ |+||.+.|..++|+ |+++++++.|-.+++||.++ .++++.+
T Consensus 110 ~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~ 189 (406)
T KOG0295|consen 110 SVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSL 189 (406)
T ss_pred ceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHh
Confidence 355666677777777787888888887 68999999999999 99999999999999999976 6778888
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
.+|+..|.++.|.|.+ .++++++.|.+|+.|++.++.+...+.. +.. ...+..+..||..+++++.|.+|++|-
T Consensus 190 ~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~cv~t~~~---h~e--wvr~v~v~~DGti~As~s~dqtl~vW~ 263 (406)
T KOG0295|consen 190 IGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGYCVKTFPG---HSE--WVRMVRVNQDGTIIASCSNDQTLRVWV 263 (406)
T ss_pred cCcccceeeEEEEecC-CeeeecccccceeEEecccceeEEeccC---chH--hEEEEEecCCeeEEEecCCCceEEEEE
Confidence 9999999999999976 6889999999999999998866555443 333 344567778899999999999999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEe------------C-----CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEE
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVC------------N-----GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLS 431 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~------------~-----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 431 (538)
+.++++...++.|..+|-|++|. + .++.+++.|++|++||+.++.++.++.+|.. .+.. ++
T Consensus 264 ~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdn-wVr~-~a 341 (406)
T KOG0295|consen 264 VATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDN-WVRG-VA 341 (406)
T ss_pred eccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccc-eeee-eE
Confidence 99999999999999999999984 2 2899999999999999999999999998744 4444 69
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 432 LTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 432 ~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
|+|.|++|+++..|+++++||.+ ++...+..|..-++++++ +-.+++||+-|.++++|.-
T Consensus 342 f~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 342 FSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999999999954 578888999999999998 6669999999999999964
No 26
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.5e-31 Score=254.90 Aligned_cols=263 Identities=23% Similarity=0.323 Sum_probs=219.5
Q ss_pred ccCcceeEEeecCCeEEEEE--------eecCCCcEEEEE-Ec-CCEEEEEeCCCcEEEEeCCCC----ceEEEEecCCc
Q 009274 228 AGGVKDLVNGLSKGNVKFKD--------LQGHRDCVTGLA-VG-GGFLFSSSFDKSIHVWSLKDF----SHVHTFKGHDH 293 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~--------l~~h~~~V~~l~-~~-~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~ 293 (538)
.+.+..++.+...+.+++++ +.||++.|.++. |+ |.+|+|||.|.++++|.++++ .++....+|++
T Consensus 333 G~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~ 412 (775)
T KOG0319|consen 333 GPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTN 412 (775)
T ss_pred CCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhccccc
Confidence 44567778888888888776 579999999998 45 779999999999999988543 23556678999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeee----cccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW----NEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
.|.+++++..+..+|++++.|+++++|++...+.......+ .......-..+++++|+.+.++|||.|.+.++|++
T Consensus 413 svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~l 492 (775)
T KOG0319|consen 413 SVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDL 492 (775)
T ss_pred ccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecc
Confidence 99999999888999999999999999999863332221111 11111122335688999999999999999999999
Q ss_pred CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 447 (538)
.+.....++.||+..|.|+.|+ +..++++|.|++|+||.+.+..++.++.+|... +.. ..|-.++..|++++.||.
T Consensus 493 e~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a-Vlr-a~F~~~~~qliS~~adGl 570 (775)
T KOG0319|consen 493 EQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA-VLR-ASFIRNGKQLISAGADGL 570 (775)
T ss_pred cCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccce-eEe-eeeeeCCcEEEeccCCCc
Confidence 9999999999999999999999 559999999999999999999999999988543 333 578889999999999999
Q ss_pred EEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 448 IKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 448 i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+++|+. ..+.+++..|...|++++. .+..++||+.||.|.+|.=.
T Consensus 571 iKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 571 IKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDV 619 (775)
T ss_pred EEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecC
Confidence 999994 5689999999999999975 77799999999999999643
No 27
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.98 E-value=3.2e-31 Score=259.17 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=213.5
Q ss_pred ecCCeEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC-------------------------------Cce
Q 009274 238 LSKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-------------------------------FSH 284 (538)
Q Consensus 238 ~~~~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~-------------------------------~~~ 284 (538)
.....++++++..-...++|..|+ +.++|.|-.|..|++|.+.. ...
T Consensus 364 ~~lpSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~ 443 (707)
T KOG0263|consen 364 NSLPSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGT 443 (707)
T ss_pred CCCCcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCce
Confidence 345677888888888899999999 78899999999999998762 122
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
..++.+|.++|..+.|+| +.++|++++.|+++++|.+.+...... ..+|. .....+.|+|.|-++++|+.|++.
T Consensus 444 ~~~L~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~---y~GH~--~PVwdV~F~P~GyYFatas~D~tA 517 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVI---YKGHL--APVWDVQFAPRGYYFATASHDQTA 517 (707)
T ss_pred eEEeecCCCceeeeeecc-cccceeeccCCcceeeeecccceeEEE---ecCCC--cceeeEEecCCceEEEecCCCcee
Confidence 345779999999999999 456889999999999999987543322 22332 222345688999999999999999
Q ss_pred EEEECCCCceeEEecCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 365 KAWSLLDGTLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
++|......+++.+.+|.+.|.|+.|++ +++++||.|.++++||+.+|..++.+.+| .+.+.+ ++++|+|++|++|
T Consensus 518 rLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH-~~~V~a-l~~Sp~Gr~LaSg 595 (707)
T KOG0263|consen 518 RLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH-KGPVTA-LAFSPCGRYLASG 595 (707)
T ss_pred eeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC-CCceEE-EEEcCCCceEeec
Confidence 9999999999999999999999999994 49999999999999999999999999886 455554 7999999999999
Q ss_pred eCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+.||.|.+||+. +.+..+.+|++.|.+++| +|..|++||.|++|++||+....
T Consensus 596 ~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 596 DEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred ccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 999999999954 588899999999999988 99999999999999999986543
No 28
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.98 E-value=2.6e-30 Score=225.24 Aligned_cols=279 Identities=19% Similarity=0.277 Sum_probs=221.9
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeC-CCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL-KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
...+-.+.||++.|..+.|+ |.+|+||+.|..|.+|++ ...+....+++|++.|..+.|.++ +..+++++.|.+++
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d-~s~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRD-GSHILSCGTDKTVR 115 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccC-CCEEEEecCCceEE
Confidence 34556689999999999999 999999999999999995 556777889999999999999885 55779999999999
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeec---CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (538)
.||.++++.....+.. .. .+.++.|. ..++.+|+.|+++++||+++...++++. .+-+++++.|. ..
T Consensus 116 ~wD~~tG~~~rk~k~h---~~----~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~ 187 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGH---TS----FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSD 187 (338)
T ss_pred EEecccceeeehhccc---cc----eeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEeccccc
Confidence 9999988765554432 22 23334443 3388999999999999999998888875 46789999999 56
Q ss_pred EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC------cceeeeccccc--
Q 009274 394 VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------KFMKSMQTHKG-- 465 (538)
Q Consensus 394 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~------~~~~~~~~h~~-- 465 (538)
.+++|+-|+.|++||++.+.....+.+|.. .++. ++.+++|.++.+-+.|.++++||.+ .++..+.+|.-
T Consensus 188 qv~sggIdn~ikvWd~r~~d~~~~lsGh~D-tIt~-lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnf 265 (338)
T KOG0265|consen 188 QVISGGIDNDIKVWDLRKNDGLYTLSGHAD-TITG-LSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNF 265 (338)
T ss_pred ceeeccccCceeeeccccCcceEEeecccC-ceee-EEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhh
Confidence 999999999999999999999999998754 4444 7999999999999999999999965 24667776543
Q ss_pred eE--EEEE--eCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEEEE
Q 009274 466 SV--FAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 466 ~v--~~~~--~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~vw~ 535 (538)
.+ ..++ +++..+..|+.|..+++||.....+....... .+.+....+.| ...+.+++.|.+|++=+
T Consensus 266 eknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh----~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 266 EKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGH----YGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred hhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCc----ceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 22 2333 49999999999999999999987665443321 33344445555 45588999999998744
No 29
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.98 E-value=4e-30 Score=248.98 Aligned_cols=281 Identities=19% Similarity=0.300 Sum_probs=223.3
Q ss_pred EEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
...+-|..+.|..++|- .++++.+++.+.+|+|+..+..+. .+.+|+..|.++.... .+.++++|+.|.++++|.
T Consensus 316 ~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~-~g~llat~sKD~svilWr 393 (775)
T KOG0319|consen 316 VKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWS-SGDLLATGSKDKSVILWR 393 (775)
T ss_pred ehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecc-cCcEEEEecCCceEEEEE
Confidence 33467889999999998 499999999999999998877665 8899999999999444 347999999999999999
Q ss_pred ccCCCCCc-ceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCce-----eE----EecCCCCCeEEEEE
Q 009274 322 FSFPLGHE-PLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTL-----SC----TMSGHKSAVSTLAV 390 (538)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~-----~~----~~~~h~~~v~~l~~ 390 (538)
++...... .+.....|.. ... ..+++..+ .+|+++|.|+++++|++...+. +. +...|...|+|+++
T Consensus 394 ~~~~~~~~~~~a~~~gH~~-svg-ava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vai 471 (775)
T KOG0319|consen 394 LNNNCSKSLCVAQANGHTN-SVG-AVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAI 471 (775)
T ss_pred ecCCcchhhhhhhhccccc-ccc-eeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEe
Confidence 95433322 2222233322 222 23344433 3999999999999999976221 11 33579999999999
Q ss_pred e--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccceeeeccccce
Q 009274 391 C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGS 466 (538)
Q Consensus 391 ~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~ 466 (538)
+ +.++++||.|++.++|++.......++.+|..+... +.|+++.+.+++++.|++|+||.+ ..+++++.+|...
T Consensus 472 a~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~--V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a 549 (775)
T KOG0319|consen 472 APNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWC--VSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA 549 (775)
T ss_pred cCCCceEEecccccceeeecccCceEEEEeeCCccceEE--EEeccccceeEeccCCceEEEEEeccceeeeeecCccce
Confidence 9 559999999999999999999999999998765443 699999999999999999999985 4689999999999
Q ss_pred EEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEEEECCCeEEEEEc
Q 009274 467 VFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 467 v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sg~~dg~v~vw~~ 536 (538)
|..+.| +|..|++++.||.+++|+++++++...... |...+.++.. + ...+++|+.||.|.+|+=
T Consensus 550 Vlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~-----H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 550 VLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA-----HNDRVWALSVSPLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred eEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh-----ccceeEEEeecCccceeEecCCCeEEEEeec
Confidence 999998 999999999999999999999988765543 2333444333 3 446888999999999973
No 30
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.98 E-value=1.9e-29 Score=225.49 Aligned_cols=283 Identities=18% Similarity=0.231 Sum_probs=225.9
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
.+..|..|+++|.+++.+ .++++||+.|..-.+|++.++.....+.+|+..|+++.|+. ++.++++|+.+|.|+||+
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~ 134 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKVLVFK 134 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEcc-CceEEEecCCCccEEEEE
Confidence 457799999999999998 89999999999999999999999999999999999999988 556889999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 399 (538)
..++.....+.... .-..-++++|.+..|+.|+.||.+.+|.+.++...+.+.||..++++=.|. ++.++++.
T Consensus 135 ~stg~~~~~~~~e~-----~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEV-----EDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred cccCceEEEeeccc-----CceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEe
Confidence 98876554443111 111234778888899999999999999999988899999999999999998 66999999
Q ss_pred cCCcEEEEECCCCceeEEEecCC-------------------------------CCceEEE-------------------
Q 009274 400 RDGTIRLWSLSDHSLLTVLEEDS-------------------------------SGAVSSV------------------- 429 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~-------------------------------~~~~~~~------------------- 429 (538)
.||+|++||..+++++..+.... .+.+..+
T Consensus 210 ~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esv 289 (399)
T KOG0296|consen 210 DDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESV 289 (399)
T ss_pred cCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhh
Confidence 99999999999999888776210 0000000
Q ss_pred --EEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEeCC-CEEEEEeCCCeEEEEecCCCeeEeeeecCCc
Q 009274 430 --LSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFLEG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGA 505 (538)
Q Consensus 430 --~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~~~-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 505 (538)
+.++..=.+.|+|+-||+|.|||+.. ..+..-.|...|..+.|.+ .+|++++.||.|+.||.+++.+...+..
T Consensus 290 e~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G--- 366 (399)
T KOG0296|consen 290 ESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTG--- 366 (399)
T ss_pred hhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEec---
Confidence 01111223578889999999999654 4555566899999999954 8999999999999999999998766553
Q ss_pred ccCCCceEEE-EEeCC-EEEEEECCCeEEEEEcC
Q 009274 506 IPCGSVITAL-LYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 506 ~~~~~~~~~~-~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
|...+..+ ..++. +++++|.|++.+||+..
T Consensus 367 --H~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 367 --HQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred --CchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 22234443 34444 57889999999999875
No 31
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.8e-29 Score=253.75 Aligned_cols=283 Identities=23% Similarity=0.404 Sum_probs=227.2
Q ss_pred EEeecC-CCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 246 KDLQGH-RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 246 ~~l~~h-~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
..+.+| ...|+|+.|+ |+.+++++.|+.+++|+..+.+ ....+.+|...|.+++|+|++. ++++++.|++|++|
T Consensus 152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~-~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS-YLLSGSDDKTLRIW 230 (456)
T ss_pred eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCc-EEEEecCCceEEEe
Confidence 345454 7899999999 9999999999999999998777 7788889999999999999655 88999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSG 398 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (538)
|+.. ....++.+..|.... ..++|+++++.+++|+.|++|++||+++++++..+.+|.+.|++++|+ +++++++
T Consensus 231 d~~~--~~~~~~~l~gH~~~v--~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 231 DLKD--DGRNLKTLKGHSTYV--TSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred eccC--CCeEEEEecCCCCce--EEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 9932 223445555555433 467899999999999999999999999999999999999999999999 6699999
Q ss_pred ecCCcEEEEECCCCc--eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEE---
Q 009274 399 SRDGTIRLWSLSDHS--LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVF--- 471 (538)
Q Consensus 399 s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~--- 471 (538)
+.|+.|++||+.++. +...+..+........+.|+|++.++++++.|+.+++||+. .....+.+|...+.++.
T Consensus 307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEeccc
Confidence 999999999999999 45666555433134557999999999999999999999965 46778888877654441
Q ss_pred --eCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe--CCEEEEEE--CCCeEEEEEcC
Q 009274 472 --LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGC--ADRTVKVYYYG 537 (538)
Q Consensus 472 --~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~--~dg~v~vw~~~ 537 (538)
..+.++++|+.|+.|++||+.++.......... ...+..+.++ .+.+++++ .|+.+++|...
T Consensus 387 ~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~----~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 387 LSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS----KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC----CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 289999999999999999999866544333221 2334444443 44466665 79999999864
No 32
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=5.5e-30 Score=256.26 Aligned_cols=272 Identities=25% Similarity=0.372 Sum_probs=236.1
Q ss_pred CCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEE-EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 251 HRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHT-FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 251 h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
|...+.+..++++++++++.|++|++||..++..+.. +.+|.+.|.++++.. ++.++++|+.|.++++||..++.+..
T Consensus 207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~ 285 (537)
T KOG0274|consen 207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTH 285 (537)
T ss_pred CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEE
Confidence 6778899999999999999999999999999999888 999999999999965 78899999999999999998887665
Q ss_pred ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEEC
Q 009274 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSL 409 (538)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~ 409 (538)
.+.. +...+.++...+.++++|+.|.+|++|++.++..+..+.+|.++|+++..+++++++|+.|++|++||+
T Consensus 286 ~l~g-------h~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~ 358 (537)
T KOG0274|consen 286 SLQG-------HTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDP 358 (537)
T ss_pred EecC-------CCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEh
Confidence 5553 334577888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEeCCCEEEEEeCCCeE
Q 009274 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFLEGKWLFTGGWDKTV 486 (538)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v 486 (538)
.+++++..+.+| ...+.+ +.+... ..+++|+.|++|++||.. +++..+.+|..-+..+.+.++.|++++.|++|
T Consensus 359 ~~~~cl~sl~gH-~~~V~s-l~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 359 RTGKCLKSLSGH-TGRVYS-LIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTI 435 (537)
T ss_pred hhceeeeeecCC-cceEEE-EEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEeccccccE
Confidence 999999999985 444443 344433 899999999999999954 46889999999999999999999999999999
Q ss_pred EEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 487 SVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 487 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++||.++++........ +...+.++...+..+++++.||.+++||+.
T Consensus 436 k~WD~~~~~~~~~~~~~----~~~~v~~l~~~~~~il~s~~~~~~~l~dl~ 482 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLEGR----HVGGVSALALGKEEILCSSDDGSVKLWDLR 482 (537)
T ss_pred EEeecccCceeeeeccC----CcccEEEeecCcceEEEEecCCeeEEEecc
Confidence 99999999887666543 223445555546779999999999999985
No 33
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=8.5e-29 Score=235.56 Aligned_cols=277 Identities=29% Similarity=0.456 Sum_probs=223.4
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+++|.++|++++|+ ++++++++.||.|++|++.+++....+..|...+..+.|++++ .++++++.||.|++||+.
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG-TYLASGSSDKTIRLWDLE 81 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCC-CEEEEEcCCCeEEEEEcC
Confidence 4577999999999999 6999999999999999999998888999999999999999865 678899999999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC--CEEEEEecC
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN--GVLYSGSRD 401 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d 401 (538)
+.+....+. .+.. ......+.++++++++++.|+.|++||+++++....+..|...+.+++|++ .++++++.|
T Consensus 82 ~~~~~~~~~---~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 82 TGECVRTLT---GHTS--YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred cccceEEEe---ccCC--cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 653333222 2221 223446667777888888899999999999999999989999999999993 477777779
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEE
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWL 477 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l 477 (538)
+.|++||+++++....+..+. ..+. .+.++|+++.+++++.|+.+++||.. +....+..|...+.++.+ ++.++
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~-~~i~-~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 234 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHT-GEVN-SVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLL 234 (289)
T ss_pred CcEEEEEccccccceeEecCc-cccc-eEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEE
Confidence 999999999888888877543 2333 37899999999999999999999965 566677788889999987 56788
Q ss_pred EEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-C-CEEEEEECCCeEEEEE
Q 009274 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-Q-GKLFVGCADRTVKVYY 535 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~sg~~dg~v~vw~ 535 (538)
++++.||.|++||+.+++....... +...+..+.+. + ..+++++.||.|++|+
T Consensus 235 ~~~~~~~~i~i~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 235 ASGSEDGTIRVWDLRTGECVQTLSG-----HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCCcEEEEEcCCceeEEEccc-----cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 8888899999999997765544431 23345555554 4 5688999999999996
No 34
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.97 E-value=3.5e-29 Score=230.64 Aligned_cols=269 Identities=19% Similarity=0.289 Sum_probs=228.9
Q ss_pred CCCCCCccceeeeeccCcceeEEeecCCeEEEEEe--------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc
Q 009274 214 AENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL--------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS 283 (538)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l--------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~ 283 (538)
...++...+.......++..++++..+|.+++|+. ..|+++|.++.|+ |++|++++.|+++.+||..+++
T Consensus 230 ~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~ 309 (524)
T KOG0273|consen 230 KSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT 309 (524)
T ss_pred ccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce
Confidence 44455677889999999999999999999999985 4599999999999 9999999999999999999999
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
..+.+.-|+.+-.++.|-.+ .-|++++.|+.|+|+.+..... ...+..|.. ....+.+.|.+.+|++++.|++
T Consensus 310 ~~q~f~~~s~~~lDVdW~~~--~~F~ts~td~~i~V~kv~~~~P---~~t~~GH~g--~V~alk~n~tg~LLaS~SdD~T 382 (524)
T KOG0273|consen 310 VKQQFEFHSAPALDVDWQSN--DEFATSSTDGCIHVCKVGEDRP---VKTFIGHHG--EVNALKWNPTGSLLASCSDDGT 382 (524)
T ss_pred EEEeeeeccCCccceEEecC--ceEeecCCCceEEEEEecCCCc---ceeeecccC--ceEEEEECCCCceEEEecCCCe
Confidence 99999999998889999753 4579999999999999875443 444444433 2224456666899999999999
Q ss_pred EEEEECCCCceeEEecCCCCCeEEEEEeC-----------CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 009274 364 IKAWSLLDGTLSCTMSGHKSAVSTLAVCN-----------GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (538)
Q Consensus 364 i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (538)
++||..........+.+|...|+.+.|++ ..+++++.|++|++||+..+.+++.+..|.. ++.. ++|
T Consensus 383 lkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~-pVys-vaf 460 (524)
T KOG0273|consen 383 LKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQE-PVYS-VAF 460 (524)
T ss_pred eEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCC-ceEE-EEe
Confidence 99999999999999999999999999981 2899999999999999999999999977644 3444 799
Q ss_pred cCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 433 TAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 433 ~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+|+|+++++|+.||.|.+|+++ +..+.+.+. +.|..++| +|..|..+-.|+.+++.|++
T Consensus 461 S~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 461 SPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCcEEEecCCCCeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999999999999999999954 566666654 45888888 88999999999999999875
No 35
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=1.1e-28 Score=230.19 Aligned_cols=283 Identities=18% Similarity=0.247 Sum_probs=221.8
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe---cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK---GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
++..|..-|.|+.|+ |.+++|++.||+|.+||-.+++.+..+. +|.+.|.+++|+|++. .+++++.|.+++|||
T Consensus 185 s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~-~~~T~SaDkt~KIWd 263 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDST-QFLTVSADKTIKIWD 263 (603)
T ss_pred cccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCc-eEEEecCCceEEEEE
Confidence 367899999999999 9999999999999999999999999998 8999999999999665 569999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 399 (538)
+.+.+....+.. .....- ..+..-+.+..|++.+.+|+|.+++.....++..+.+|...|+++..+ +.+|++|+
T Consensus 264 Vs~~slv~t~~~---~~~v~d-qqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs 339 (603)
T KOG0318|consen 264 VSTNSLVSTWPM---GSTVED-QQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS 339 (603)
T ss_pred eeccceEEEeec---CCchhc-eEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec
Confidence 998754433332 222111 122333447899999999999999999999999999999999999999 55999999
Q ss_pred cCCcEEEEECCCCceeE-----------EEecCC------------------------------------------C---
Q 009274 400 RDGTIRLWSLSDHSLLT-----------VLEEDS------------------------------------------S--- 423 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~-----------~~~~~~------------------------------------------~--- 423 (538)
.||.|.-||..++..-+ .+.... .
T Consensus 340 yDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~ 419 (603)
T KOG0318|consen 340 YDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGT 419 (603)
T ss_pred cCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCE
Confidence 99999999987543210 000000 0
Q ss_pred -----------------------CceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc----ceeeeccccceEEEEEe--CC
Q 009274 424 -----------------------GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----FMKSMQTHKGSVFAVFL--EG 474 (538)
Q Consensus 424 -----------------------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~h~~~v~~~~~--~~ 474 (538)
+....+++++|++..+++|+.|+.+++|.+.. .......|.++|+++++ |+
T Consensus 420 avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~ 499 (603)
T KOG0318|consen 420 AVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDG 499 (603)
T ss_pred EEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCC
Confidence 00112367889999999999999999998543 34456779999999976 99
Q ss_pred CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCE-EEEEECCCeEEEEEcCC
Q 009274 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGK-LFVGCADRTVKVYYYGK 538 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-l~sg~~dg~v~vw~~~~ 538 (538)
.+|++|...+.+.+||+.+.+.....-. + |.+.+.+++|+ ++. +++|+-|-.|.||++++
T Consensus 500 ~yla~~Da~rkvv~yd~~s~~~~~~~w~---F-HtakI~~~aWsP~n~~vATGSlDt~Viiysv~k 561 (603)
T KOG0318|consen 500 AYLAAGDASRKVVLYDVASREVKTNRWA---F-HTAKINCVAWSPNNKLVATGSLDTNVIIYSVKK 561 (603)
T ss_pred cEEEEeccCCcEEEEEcccCceecceee---e-eeeeEEEEEeCCCceEEEeccccceEEEEEccC
Confidence 9999999999999999998876322211 1 44456666664 544 77899999999999864
No 36
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3.7e-29 Score=242.63 Aligned_cols=267 Identities=23% Similarity=0.361 Sum_probs=211.3
Q ss_pred cceeeeeccCcceeEEeecC-CeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 221 DIDQARAAGGVKDLVNGLSK-GNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
.+..+.+...+.-++.+.+. |.+.+|+ .+||...++|++++ |++++||+.||.|+|||..++-+..+|
T Consensus 309 ~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF 388 (893)
T KOG0291|consen 309 KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF 388 (893)
T ss_pred eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe
Confidence 45566666666666666554 5556665 46899999999999 889999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC-cEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-TIKAW 367 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-~i~iw 367 (538)
..|+..|+.+.|+. .++.+++++.||+|+.||+....+- +.+..... ....++++.|.|..+++|+.|. .|++|
T Consensus 389 teHts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkRYrNf---RTft~P~p-~QfscvavD~sGelV~AG~~d~F~IfvW 463 (893)
T KOG0291|consen 389 TEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKRYRNF---RTFTSPEP-IQFSCVAVDPSGELVCAGAQDSFEIFVW 463 (893)
T ss_pred ccCCCceEEEEEEe-cCCEEEEeecCCeEEeeeeccccee---eeecCCCc-eeeeEEEEcCCCCEEEeeccceEEEEEE
Confidence 99999999999987 5567799999999999999865443 33333333 2234567778899999998876 69999
Q ss_pred ECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEeC
Q 009274 368 SLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 368 d~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 444 (538)
++.+|+.+-.+.||.++|.+++|+ ++.|+++|.|.+|++||+-.. ..+.++...+. +.. ++|.|+|+.+++++.
T Consensus 464 S~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sd--vl~-vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 464 SVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSD--VLA-VSFRPDGKELAVATL 540 (893)
T ss_pred EeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccc--eeE-EEEcCCCCeEEEEEe
Confidence 999999999999999999999998 779999999999999999654 34455554322 233 699999999999999
Q ss_pred CCcEEEEeCCcceee--ecc--------------------ccceEEEEE--eCCCEEEEEeCCCeEEEEecCCCe
Q 009274 445 SGSIKVWRNDKFMKS--MQT--------------------HKGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 445 dg~i~iwd~~~~~~~--~~~--------------------h~~~v~~~~--~~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
||.|.+||.....+. +.+ .....+.++ +||..+++||..+.|.+||+.++-
T Consensus 541 dgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~v 615 (893)
T KOG0291|consen 541 DGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGV 615 (893)
T ss_pred cceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhh
Confidence 999999996532221 111 113445555 499999999999999999987654
No 37
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.97 E-value=2.9e-28 Score=206.96 Aligned_cols=259 Identities=18% Similarity=0.323 Sum_probs=204.0
Q ss_pred eeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEE
Q 009274 233 DLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVV 299 (538)
Q Consensus 233 ~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~ 299 (538)
.+++++.+..+++|. ++-..+.|+.+... ++.||+++ ...||+||+++++ ++.++.+|+..|+++.
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVg 90 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTAVG 90 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEEEE
Confidence 455666666666665 55566789999998 66677766 5589999998765 5899999999999999
Q ss_pred EecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe-
Q 009274 300 YVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM- 378 (538)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~- 378 (538)
|.. +++.+++|+.||+++|||++.......+... .......++|+...|++|..+|.|++||+.+..+...+
T Consensus 91 F~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~------spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 91 FQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN------SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred Eee-cCeEEEecCCCceEEEEeccCcccchhccCC------CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC
Confidence 976 5668899999999999999975443333221 12224567788889999999999999999988766655
Q ss_pred cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc------eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEE
Q 009274 379 SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (538)
Q Consensus 379 ~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 450 (538)
.....+|.++... +.+++.+...|+.++|++-+.. ++.+++.+ .+.+.. +.+||++++|++++.|.+++|
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah-~~~il~-C~lSPd~k~lat~ssdktv~i 241 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH-NGHILR-CLLSPDVKYLATCSSDKTVKI 241 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc-cceEEE-EEECCCCcEEEeecCCceEEE
Confidence 3345678888877 5699999999999999997654 34445544 455555 589999999999999999999
Q ss_pred EeCCc---ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 451 WRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 451 wd~~~---~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
|++.. ....+++|+.++..+.| ||.||+||+.|+.+++||++.++......
T Consensus 242 wn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 242 WNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred EecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecC
Confidence 99765 45677899999999888 99999999999999999999988655443
No 38
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.6e-30 Score=251.47 Aligned_cols=278 Identities=20% Similarity=0.313 Sum_probs=228.3
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
|+.-+..|.+++|+ ..+++++-..|.|++||..-+.++..|..|.++|..++|+| .+.+|+||+.|-.|++|+..+.
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~r 83 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTR 83 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccc
Confidence 55567789999999 88999999999999999999999999999999999999998 5668999999999999999876
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCc
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT 403 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~ 403 (538)
++...+.. |. .+...+.|++.-.+++++|+|.+|+||+..+++++..+.||...|.|..|+ .+.++|+|-|.+
T Consensus 84 rclftL~G---Hl--DYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQT 158 (1202)
T KOG0292|consen 84 RCLFTLLG---HL--DYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQT 158 (1202)
T ss_pred eehhhhcc---cc--ceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccce
Confidence 65544433 33 233456778778899999999999999999999999999999999999999 569999999999
Q ss_pred EEEEECCCCc-----------------------------eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 404 IRLWSLSDHS-----------------------------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 404 i~iwd~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
|++||+..-+ ..+.+.+|..+ +.. .+|+|.-.++++|+.|+.|++|...
T Consensus 159 VRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRG-VNw-aAfhpTlpliVSG~DDRqVKlWrmn 236 (1202)
T KOG0292|consen 159 VRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRG-VNW-AAFHPTLPLIVSGADDRQVKLWRMN 236 (1202)
T ss_pred EEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccc-cce-EEecCCcceEEecCCcceeeEEEec
Confidence 9999995311 01223344333 333 5899999999999999999999855
Q ss_pred c----ceeeeccccceEEEEEeC--CCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECC
Q 009274 455 K----FMKSMQTHKGSVFAVFLE--GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCAD 528 (538)
Q Consensus 455 ~----~~~~~~~h~~~v~~~~~~--~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 528 (538)
+ .+.+..+|.+.|.++-|+ .+++++.|.|++|+|||+...+....+... +.........|...|++++.|
T Consensus 237 etKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrre----ndRFW~laahP~lNLfAAgHD 312 (1202)
T KOG0292|consen 237 ETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRE----NDRFWILAAHPELNLFAAGHD 312 (1202)
T ss_pred cccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeecc----CCeEEEEEecCCcceeeeecC
Confidence 3 455778999999999884 489999999999999999988776666544 333444455567778998889
Q ss_pred CeEEEEEcC
Q 009274 529 RTVKVYYYG 537 (538)
Q Consensus 529 g~v~vw~~~ 537 (538)
+-+.||++.
T Consensus 313 sGm~VFkle 321 (1202)
T KOG0292|consen 313 SGMIVFKLE 321 (1202)
T ss_pred CceEEEEEc
Confidence 889998875
No 39
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.7e-29 Score=238.58 Aligned_cols=259 Identities=19% Similarity=0.299 Sum_probs=215.8
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEEeec---------CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKDLQG---------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~---------h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 290 (538)
+-++.+.+...-++.+..+|.+.+|+.+. ..-||++..|- .+++++|+.|..|+||++++++.++.|+.
T Consensus 16 VKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeA 95 (794)
T KOG0276|consen 16 VKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEA 95 (794)
T ss_pred eeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeec
Confidence 55677778888899999999999998654 34577777776 89999999999999999999999999999
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEEC
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~ 369 (538)
|.+.|.+++.+|. ..++++++.|-+|++||++.. -...+.+.+|. ++....++.| |.+.+++++-|++|++|.+
T Consensus 96 H~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~--wa~~qtfeGH~--HyVMqv~fnPkD~ntFaS~sLDrTVKVWsl 170 (794)
T KOG0276|consen 96 HSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENE--WACEQTFEGHE--HYVMQVAFNPKDPNTFASASLDRTVKVWSL 170 (794)
T ss_pred cccceeeeeecCC-CCeEEecCCccEEEEeeccCc--eeeeeEEcCcc--eEEEEEEecCCCccceeeeeccccEEEEEc
Confidence 9999999999995 457799999999999999843 23444555554 4444556776 4569999999999999999
Q ss_pred CCCceeEEecCCCCCeEEEEEe-CC---EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVC-NG---VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~-~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
.+..+..++.+|...|+|+.+- ++ +|++|+.|.++++||.++.++++++.+|... +.. .+|+|.-..+++|++|
T Consensus 171 gs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~N-vs~-v~fhp~lpiiisgsED 248 (794)
T KOG0276|consen 171 GSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNN-VSF-VFFHPELPIIISGSED 248 (794)
T ss_pred CCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccccc-ceE-EEecCCCcEEEEecCC
Confidence 9999999999999999999998 33 9999999999999999999999999988543 333 6899999999999999
Q ss_pred CcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCCCeEE
Q 009274 446 GSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVS 487 (538)
Q Consensus 446 g~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~ 487 (538)
|+++||+..+ ...++...-..++|+.. .++.++.|..+|.|.
T Consensus 249 GTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~ 294 (794)
T KOG0276|consen 249 GTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT 294 (794)
T ss_pred ccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE
Confidence 9999999654 45556666678888874 566677777777664
No 40
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=4.6e-29 Score=249.64 Aligned_cols=239 Identities=29% Similarity=0.422 Sum_probs=210.7
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
+.||.+.|+++++. ++++++|+.|.++++||..+|++..++.+|.+.|.++.. .+.++++|+.|.+|++|++.++
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~---~~~~~~sgs~D~tVkVW~v~n~ 321 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI---DPFLLVSGSRDNTVKVWDVTNG 321 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc---cCceEeeccCCceEEEEeccCc
Confidence 88999999999999 999999999999999999999999999999999999987 5567889999999999999976
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC-CEEEEEecCCcE
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN-GVLYSGSRDGTI 404 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i 404 (538)
.....+.. +...+.++..++.++++|+.|++|++||+.+++++.++.+|...|+++.+.+ +.+++|+.|++|
T Consensus 322 ~~l~l~~~-------h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 322 ACLNLLRG-------HTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTI 394 (537)
T ss_pred ceEEEecc-------ccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccce
Confidence 55444433 3335778888899999999999999999999999999999999999999997 999999999999
Q ss_pred EEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeecc-ccceEEEEEeCCCEEEEE
Q 009274 405 RLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQT-HKGSVFAVFLEGKWLFTG 480 (538)
Q Consensus 405 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~-h~~~v~~~~~~~~~l~sg 480 (538)
++||+++. +++.++..+.. .+ ..+...+++|++++.|++|++|| ..++.+.+.+ |...|.++......++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~-~v---~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s 470 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTS-LV---SSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCS 470 (537)
T ss_pred EeecCCchhhhhhhhcCCcc-cc---cccccccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEE
Confidence 99999999 88888887643 22 34556688999999999999998 4568888888 778999998887889999
Q ss_pred eCCCeEEEEecCCCeeEeee
Q 009274 481 GWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~ 500 (538)
+.||.+++||+++++.....
T Consensus 471 ~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 471 SDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred ecCCeeEEEecccCchhhhh
Confidence 99999999999998866544
No 41
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=5e-29 Score=225.81 Aligned_cols=278 Identities=19% Similarity=0.254 Sum_probs=220.0
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC---ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
..+..|.+.|+-+.|+ |++|||++.|.+..+|++..- +..+++.+|..+|..+.|+|++. ++++|+.|..+.+|
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr-yLlaCg~~e~~~lw 296 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR-YLLACGFDEVLSLW 296 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC-eEEecCchHheeec
Confidence 3478999999999999 999999999999999987543 45788999999999999999655 66888888889999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC-CCeEEEEEe--CCEEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-SAVSTLAVC--NGVLYS 397 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~--~~~l~s 397 (538)
|..++........- .. .....+++.|||..+++|+.|+++..||+. |+.+...++-. ..|.+++.. +.++++
T Consensus 297 Dv~tgd~~~~y~~~---~~-~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 297 DVDTGDLRHLYPSG---LG-FSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLL 371 (519)
T ss_pred cCCcchhhhhcccC---cC-CCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEE
Confidence 99988655444332 12 223456899999999999999999999985 44455555433 468899887 668888
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEE--Ee-
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAV--FL- 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~--~~- 472 (538)
.+.|..|++++..+......+..++ .+ ...+++.+++++++.-.+..+++||..+ .++.+.+|...-.-+ +|
T Consensus 372 v~~d~~i~l~~~e~~~dr~lise~~--~i-ts~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFg 448 (519)
T KOG0293|consen 372 VTVDKKIRLYNREARVDRGLISEEQ--PI-TSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFG 448 (519)
T ss_pred EecccceeeechhhhhhhccccccC--ce-eEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccC
Confidence 9999999999998766655554432 23 3479999999999999999999999764 567888887654333 44
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeC---CEEEEEECCCeEEEEEcC
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~v~vw~~~ 537 (538)
+..++++||+|+.|+||+..++++...+.. |...++++.|++ ..+++|++||+|+||..+
T Consensus 449 g~~~~fiaSGSED~kvyIWhr~sgkll~~LsG-----Hs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 449 GGNDKFIASGSEDSKVYIWHRISGKLLAVLSG-----HSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CCCcceEEecCCCceEEEEEccCCceeEeecC-----CcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 678999999999999999999987665543 345677887762 348899999999999875
No 42
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.2e-28 Score=261.98 Aligned_cols=265 Identities=20% Similarity=0.307 Sum_probs=214.9
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEee----------------cCCCcEEEEEEc---CCEEEEEeCCCcEEEEeC
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDLQ----------------GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSL 279 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~----------------~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~ 279 (538)
...+..+.+.+++..++++..++.+++|++. .+...|.+++|+ +.+|++++.||+|++||+
T Consensus 483 ~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~ 562 (793)
T PLN00181 483 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDV 562 (793)
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEEC
Confidence 4457778889999999999999999999853 134578899997 689999999999999999
Q ss_pred CCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEE-eecCCEEEEe
Q 009274 280 KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL-TTSGRYLYTG 358 (538)
Q Consensus 280 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~sg 358 (538)
.+++.+..+.+|.+.|++++|+|.++.+|++|+.||+|++||+.++.....+. .+. .. ....+ ++++.++++|
T Consensus 563 ~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~---~~~--~v-~~v~~~~~~g~~latg 636 (793)
T PLN00181 563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK---TKA--NI-CCVQFPSESGRSLAFG 636 (793)
T ss_pred CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe---cCC--Ce-EEEEEeCCCCCEEEEE
Confidence 99999999999999999999998778899999999999999998764433222 111 11 22344 4568899999
Q ss_pred eCCCcEEEEECCCCc-eeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCC------ceeEEEecCCCCceEEEE
Q 009274 359 SGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDH------SLLTVLEEDSSGAVSSVL 430 (538)
Q Consensus 359 ~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~ 430 (538)
+.||.|++||+++.+ .+..+.+|...|.++.|. ++++++++.|++|++||++.+ ..+..+..+. .. ...+
T Consensus 637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~-~~-i~~v 714 (793)
T PLN00181 637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHT-NV-KNFV 714 (793)
T ss_pred eCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCC-CC-eeEE
Confidence 999999999998765 567788999999999998 679999999999999999753 4566666553 33 3346
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCcc--eee-------------eccccceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 431 SLTAVQHTLVVSHESGSIKVWRNDKF--MKS-------------MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 431 ~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~-------------~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
++++++.+|++|+.|+.|++|+.... ... ...|...|.+++| ++..|++|+.||.|++|++
T Consensus 715 ~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 715 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 89999999999999999999995422 111 1235567888887 8889999999999999986
No 43
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.6e-29 Score=237.80 Aligned_cols=274 Identities=21% Similarity=0.325 Sum_probs=225.4
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
++..|++.|.|+.++ ..+++++-.+|.|.|||.++...++.+.-..-+|.+..|.+ ..+.+++|+.|..|++|+.++
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEeccc
Confidence 356689999999999 89999999999999999999999999999999999999987 566889999999999999998
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEe---CCEEEEEec
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC---NGVLYSGSR 400 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~ 400 (538)
...... +..|. .+..+.+++|...+++++|+|-+|++||... ..+.+++.||...|.+++|+ ++.++++|-
T Consensus 87 ~ekV~~---FeAH~--DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL 161 (794)
T KOG0276|consen 87 GEKVKT---FEAHS--DYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL 161 (794)
T ss_pred ceeeEE---eeccc--cceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence 765444 33343 3445678889889999999999999999975 46888999999999999999 459999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe--CC
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--EG 474 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~--~~ 474 (538)
|++|++|.+.+..+..++.+|.++.. + +.+-+ |..+|++|+.|.++++|| +.++++++.+|...|..+.| .-
T Consensus 162 DrTVKVWslgs~~~nfTl~gHekGVN-~-Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~l 239 (794)
T KOG0276|consen 162 DRTVKVWSLGSPHPNFTLEGHEKGVN-C-VDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPEL 239 (794)
T ss_pred cccEEEEEcCCCCCceeeeccccCcc-e-EEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCC
Confidence 99999999999999999998866543 3 35543 456999999999999999 45699999999999999988 55
Q ss_pred CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEEEECCCeEEE
Q 009274 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFVGCADRTVKV 533 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sg~~dg~v~v 533 (538)
..++|||.||++|||+..+-+....+... .. .+.++.. . ++.++.|.+.|.|.+
T Consensus 240 piiisgsEDGTvriWhs~Ty~lE~tLn~g----le-RvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 240 PIIISGSEDGTVRIWNSKTYKLEKTLNYG----LE-RVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred cEEEEecCCccEEEecCcceehhhhhhcC----Cc-eEEEEeecCCCCeEEEeccCCcEEE
Confidence 68999999999999998887654433322 12 2333332 2 555677777776543
No 44
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.5e-28 Score=246.98 Aligned_cols=268 Identities=23% Similarity=0.367 Sum_probs=225.9
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeC-CCCce
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL-KDFSH 284 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~-~~~~~ 284 (538)
...+.+..+++++..++....++.+.+|.. .+|...|++++|+ +.++++++.|++|+|||+ ..+..
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~ 238 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRN 238 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeE
Confidence 344667888899999988888888888876 6899999999999 889999999999999999 66689
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
++++++|...|++++|+|++ +++++|+.|++|++||+++++... .+..+.. ....++++++++++++++.|+.|
T Consensus 239 ~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~---~l~~hs~--~is~~~f~~d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 239 LKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVR---KLKGHSD--GISGLAFSPDGNLLVSASYDGTI 312 (456)
T ss_pred EEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEE---eeeccCC--ceEEEEECCCCCEEEEcCCCccE
Confidence 99999999999999999988 899999999999999999854443 3333433 23356899999999999999999
Q ss_pred EEEECCCCc--eeEEecCCCCC--eEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCc-eEEEEEEcCCCC
Q 009274 365 KAWSLLDGT--LSCTMSGHKSA--VSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA-VSSVLSLTAVQH 437 (538)
Q Consensus 365 ~iwd~~~~~--~~~~~~~h~~~--v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 437 (538)
++||+.++. +...+.++... ++++.|+ +.++++++.|+.+++||++.+..+..+..+.... .......++.+.
T Consensus 313 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (456)
T KOG0266|consen 313 RVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGK 392 (456)
T ss_pred EEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCC
Confidence 999999998 56777776655 9999998 5699999999999999999999999998887652 121234467899
Q ss_pred EEEEEeCCCcEEEEeCC--cceeeeccc-cceEEEEEe--CCCEEEEEe--CCCeEEEEecC
Q 009274 438 TLVVSHESGSIKVWRND--KFMKSMQTH-KGSVFAVFL--EGKWLFTGG--WDKTVSVQELA 492 (538)
Q Consensus 438 ~l~~~~~dg~i~iwd~~--~~~~~~~~h-~~~v~~~~~--~~~~l~sgs--~dg~v~iwd~~ 492 (538)
++++|+.|+.|++||.. ..+..+.+| ...+..+.+ ..+++++++ .|+.+++|...
T Consensus 393 ~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 393 LIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred eEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 99999999999999954 567788899 777777765 788999988 68999999764
No 45
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=1.6e-28 Score=209.94 Aligned_cols=278 Identities=17% Similarity=0.271 Sum_probs=228.4
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE--EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH--TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
..+++|...|.+++|+ |..+++|+.|+++++|+++..+... ..++|.+.|-.++|+|....++++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 5578999999999999 9999999999999999998765543 35689999999999999999999999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 399 (538)
++.+++...+...... -...++|+|+++++++.|..|...|.++.+.....+ ....++-++|+ +++++...
T Consensus 94 ~r~~k~~~~i~~~~en------i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~ 166 (313)
T KOG1407|consen 94 IRSGKCTARIETKGEN------INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTN 166 (313)
T ss_pred eccCcEEEEeeccCcc------eEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEec
Confidence 9987765554433222 245899999999999999999999999988777654 45677888888 56777777
Q ss_pred cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe--CCC
Q 009274 400 RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGK 475 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~ 475 (538)
..|+|.|.....-+++..++.|..+ .. ++.|+|+|+++++|+.|-.+.+||..+ +.+.+..+.-+|..++| ||+
T Consensus 167 GlG~v~ILsypsLkpv~si~AH~sn-Ci-cI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~ 244 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKPVQSIKAHPSN-CI-CIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR 244 (313)
T ss_pred CCceEEEEeccccccccccccCCcc-eE-EEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence 7899999999999999999988543 33 379999999999999999999999887 56788889999999998 999
Q ss_pred EEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEE-EEECC---------CeEEEEEcCC
Q 009274 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLF-VGCAD---------RTVKVYYYGK 538 (538)
Q Consensus 476 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~-sg~~d---------g~v~vw~~~~ 538 (538)
+|++||+|..|-|=+++++........ ......++|++. .|+ -+++| |.|++|-+++
T Consensus 245 ~lASaSEDh~IDIA~vetGd~~~eI~~------~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 245 MLASASEDHFIDIAEVETGDRVWEIPC------EGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred eeeccCccceEEeEecccCCeEEEeec------cCCceeEEecCCCceeeEEecCCCCccccccceeEEecCCC
Confidence 999999999999999999987666554 334555556544 343 34432 6888887653
No 46
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.6e-27 Score=205.09 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=206.8
Q ss_pred ceeeeeccC-cceeEEeecCCeEEEEEee-------------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC--CCc
Q 009274 222 IDQARAAGG-VKDLVNGLSKGNVKFKDLQ-------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFS 283 (538)
Q Consensus 222 ~~~~~~~~~-~~~~~~~~~~~~~~i~~l~-------------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~--~~~ 283 (538)
+......++ +..+++++.+..+++|... +|+..|++++|+ |++|++||.|.++.||.-. +.+
T Consensus 17 ~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efe 96 (312)
T KOG0645|consen 17 VWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFE 96 (312)
T ss_pred EEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCcee
Confidence 445555555 5667888888888888765 599999999997 9999999999999999865 347
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
++.++++|...|.+++|++ ++.+|++++.|..|-||.+...........+..|... ...+.++|...+|++++.|.+
T Consensus 97 cv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD--VK~V~WHPt~dlL~S~SYDnT 173 (312)
T KOG0645|consen 97 CVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD--VKHVIWHPTEDLLFSCSYDNT 173 (312)
T ss_pred EEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc--ccEEEEcCCcceeEEeccCCe
Confidence 8899999999999999988 5568899999999999999866655555555554431 224577888899999999999
Q ss_pred EEEEECC---CCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 009274 364 IKAWSLL---DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 364 i~iwd~~---~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
|++|+-. .-++++++.+|.+.|.+++|+ +..+++++.|++++||-..+ .+...+...... +.|. ...
T Consensus 174 Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~-v~W~--~~~ 245 (312)
T KOG0645|consen 174 IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYD-VPWD--NGV 245 (312)
T ss_pred EEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc-----CcchhcccceEe-eeec--ccc
Confidence 9999865 346899999999999999999 56999999999999998662 233333444444 4555 568
Q ss_pred EEEEeCCCcEEEEeCC----cc-----eeeeccccceEEEEEeC---CCEEEEEeCCCeEEEEecC
Q 009274 439 LVVSHESGSIKVWRND----KF-----MKSMQTHKGSVFAVFLE---GKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~----~~-----~~~~~~h~~~v~~~~~~---~~~l~sgs~dg~v~iwd~~ 492 (538)
|++++.|+.|++|... .+ ...-..|...|+++.|+ .+.|++|+.||.|++|.+.
T Consensus 246 IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 246 IASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 9999999999999622 12 22335688899999983 5799999999999999874
No 47
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.2e-29 Score=226.37 Aligned_cols=273 Identities=19% Similarity=0.270 Sum_probs=215.8
Q ss_pred EEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
+-.|.||.+.|.|++=+ -..++||+.||.|+|||+....+..+++.|.+.|..+++.. ..+++++.|.+|+.|.
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk 135 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWK 135 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc---cceEEecCCcceeeee
Confidence 34579999999999998 35799999999999999999999999999999999999964 4678999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEE
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSG 398 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~ 398 (538)
++.+ +...+...... . -...+..++.++|++. .|.|||.+...++..+.-..+.|.++.|+ .+.|++|
T Consensus 136 ~~~~----p~~tilg~s~~--~-gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~ 206 (433)
T KOG0268|consen 136 IDGP----PLHTILGKSVY--L-GIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC 206 (433)
T ss_pred ccCC----cceeeeccccc--c-ccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence 8753 22222222110 0 1122334567888876 59999999999999998888899999999 4588999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe--C
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL--E 473 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~--~ 473 (538)
+.|+.|.+||++++++++.+..... ...++|+|.+-.+++|++|..++.||++ .++....+|.+.|.+++| .
T Consensus 207 ~sDrsIvLyD~R~~~Pl~KVi~~mR---TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 207 ASDRSIVLYDLRQASPLKKVILTMR---TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT 283 (433)
T ss_pred ccCCceEEEecccCCccceeeeecc---ccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCC
Confidence 9999999999999999887765433 3337999988889999999999999965 567777888899999876 8
Q ss_pred CCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEECCCeEEEEEc
Q 009274 474 GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 474 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~~ 536 (538)
|+-+++||.|.+|+||.++.+..... .+... ..-+.++.| .|.+ +++||+|+.|++|+-
T Consensus 284 G~EfvsgsyDksIRIf~~~~~~SRdi-YhtkR---Mq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 284 GQEFVSGSYDKSIRIFPVNHGHSRDI-YHTKR---MQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred cchhccccccceEEEeecCCCcchhh-hhHhh---hheeeEEEEeccccEEEecCCCcceeeeec
Confidence 99999999999999999987754322 22222 123444444 4655 788999999999974
No 48
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.8e-26 Score=215.52 Aligned_cols=306 Identities=17% Similarity=0.223 Sum_probs=244.6
Q ss_pred CCccceeeeeccCcceeEEeecCCeEEEEEee-----------cCCCcEEEEEEc--CCEEEEEeC--CCcEEEEeCCCC
Q 009274 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSF--DKSIHVWSLKDF 282 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-----------~h~~~V~~l~~~--~~~l~s~s~--dg~i~iwd~~~~ 282 (538)
.+..+..+.+++.+..++++...|++++|.-. --.++|..|+|+ +++|++.+. ++..+++-.++|
T Consensus 58 H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG 137 (603)
T KOG0318|consen 58 HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG 137 (603)
T ss_pred ccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCC
Confidence 35567789999999999999999999999832 346899999999 777776654 333344444578
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee-eecccCCceeeeEEEEeecCCEEEEeeCC
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK-KWNEEKDWRYSGIHALTTSGRYLYTGSGD 361 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 361 (538)
..+..+.+|...|+++.|-|.....+++|+.|++|.+|+-.. -.++ .+..|. ....+..++|||..+++++.|
T Consensus 138 ~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP----FKFk~s~r~Hs--kFV~~VRysPDG~~Fat~gsD 211 (603)
T KOG0318|consen 138 NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP----FKFKSSFREHS--KFVNCVRYSPDGSRFATAGSD 211 (603)
T ss_pred CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC----eeeeecccccc--cceeeEEECCCCCeEEEecCC
Confidence 889999999999999999999999999999999999997321 1111 112222 344567899999999999999
Q ss_pred CcEEEEECCCCceeEEec---CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCC--CceEEEEEEcC
Q 009274 362 RTIKAWSLLDGTLSCTMS---GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS--GAVSSVLSLTA 434 (538)
Q Consensus 362 g~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~ 434 (538)
|++.+||-.+++.+..+. +|++.|.+++|+ ...+++++.|.+++|||+.+.++++++..... .....++ |.
T Consensus 212 gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~l-Wq- 289 (603)
T KOG0318|consen 212 GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCL-WQ- 289 (603)
T ss_pred ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEE-Ee-
Confidence 999999999999999997 899999999999 44999999999999999999999999876544 2333332 33
Q ss_pred CCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCC
Q 009274 435 VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGS 510 (538)
Q Consensus 435 ~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 510 (538)
...|++.+.+|.|.+++.. ...+.+.+|...|+++.. ++++|++|+.||.|.-|+..++......... +..
T Consensus 290 -kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~----h~n 364 (603)
T KOG0318|consen 290 -KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKG----HTN 364 (603)
T ss_pred -CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccccccccc----ccc
Confidence 6689999999999999843 478899999999999875 8999999999999999999988654332111 444
Q ss_pred ceEEEEEe-CCEEEEEECCCeEEEEEc
Q 009274 511 VITALLYW-QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 511 ~~~~~~~~-~~~l~sg~~dg~v~vw~~ 536 (538)
.+..+... .+.+++.+.|.++++.++
T Consensus 365 qI~~~~~~~~~~~~t~g~Dd~l~~~~~ 391 (603)
T KOG0318|consen 365 QIKGMAASESGELFTIGWDDTLRVISL 391 (603)
T ss_pred eEEEEeecCCCcEEEEecCCeEEEEec
Confidence 55555555 488999999999999876
No 49
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.2e-28 Score=204.90 Aligned_cols=267 Identities=17% Similarity=0.264 Sum_probs=205.8
Q ss_pred EEEEEc---CCEEEEEe-------CCCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 256 TGLAVG---GGFLFSSS-------FDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 256 ~~l~~~---~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
.++.|+ .++|+.+. ..|++.|.++...+-+..+. .-.+.+..++|++..+..+++++.||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 456666 45544442 36889999987555554443 2467899999999999999999999999999954
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeec---CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYS 397 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s 397 (538)
....++..+..|... +.++.++ .+.++++|.|++|++||....+.+.++.+|..-|+..+|+ ++++++
T Consensus 92 --~~s~Pi~~~kEH~~E----V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 92 --MPSKPIHKFKEHKRE----VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred --CCCcchhHHHhhhhh----eEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEE
Confidence 344566666665542 4455443 4588888999999999999999999999999999999999 779999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEc-CCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe-
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT-AVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL- 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~- 472 (538)
+|.|+++++||++.......+..|. ..+.+ +.|+ .+.+.+++|+.|+.|+.||++ .++..+.+|.-.|..+.+
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~~i~ah~-~Eil~-cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~S 243 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFMSIEAHN-SEILC-CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFS 243 (311)
T ss_pred ccCCceEEEEEecCCCceeEEEecc-ceeEe-ecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecC
Confidence 9999999999998755444466654 33444 3454 577899999999999999954 578889999999999987
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCe-eEeeeecCCcccCCCceEEEEEe---CCEEEEEECCCeEEEEE
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDE-FEEDVIPTGAIPCGSVITALLYW---QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~v~vw~ 535 (538)
....|++++.|-+++|||...+. ......+ |...+..+.++ .+++++++.|+.++||+
T Consensus 244 ph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~-----HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 244 PHHASLLASASYDMTVRIWDPERQDSAIETVDH-----HTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cchhhHhhhccccceEEecccccchhhhhhhhc-----cceEEeccccccccCceeeecccccceeeec
Confidence 56789999999999999998543 2222222 33344444443 67899999999999997
No 50
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.9e-28 Score=220.06 Aligned_cols=269 Identities=15% Similarity=0.271 Sum_probs=222.7
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEE------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCce
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSH 284 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~ 284 (538)
...+.-..++.+++.+++++.+....+|. +.||..+|..+.|+ .+++++|+.|..+++||+.+|..
T Consensus 224 tdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~ 303 (519)
T KOG0293|consen 224 TDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL 303 (519)
T ss_pred CCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh
Confidence 44688899999999999999888777665 67999999999999 89999999999999999999999
Q ss_pred EEEEec-CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 285 VHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 285 ~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
...+.. |...+.+++|.|++.. +++|+.|+++..||++... ...|..... .....+++++||+++++.+.|..
T Consensus 304 ~~~y~~~~~~S~~sc~W~pDg~~-~V~Gs~dr~i~~wdlDgn~----~~~W~gvr~-~~v~dlait~Dgk~vl~v~~d~~ 377 (519)
T KOG0293|consen 304 RHLYPSGLGFSVSSCAWCPDGFR-FVTGSPDRTIIMWDLDGNI----LGNWEGVRD-PKVHDLAITYDGKYVLLVTVDKK 377 (519)
T ss_pred hhhcccCcCCCcceeEEccCCce-eEecCCCCcEEEecCCcch----hhccccccc-ceeEEEEEcCCCcEEEEEecccc
Confidence 888753 4688999999997664 6999999999999997432 333333332 22335688899999999999999
Q ss_pred EEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEE
Q 009274 364 IKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLV 440 (538)
Q Consensus 364 i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 440 (538)
|++++..+........ ...+|+++..+ +.++++.-.+..+++||+...+.+..+.++..+...-..+|.. +..+++
T Consensus 378 i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fia 456 (519)
T KOG0293|consen 378 IRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIA 456 (519)
T ss_pred eeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEE
Confidence 9999987765554333 45789999999 4588888899999999999988898888887666554445553 458999
Q ss_pred EEeCCCcEEEEe--CCcceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCC
Q 009274 441 VSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 441 ~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+|++|+.|+||+ .++++..+.+|...|+|++| +..++|++|.||+||||.....
T Consensus 457 SGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 457 SGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred ecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 999999999999 56799999999999999998 6779999999999999987643
No 51
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.8e-27 Score=199.43 Aligned_cols=261 Identities=18% Similarity=0.237 Sum_probs=213.9
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 289 (538)
.+..+.+..+++..++..++..+++|+ +.||...|..++.+ +..+++|+.|+.|.+||+++|+.++.+.
T Consensus 19 aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~r 98 (307)
T KOG0316|consen 19 AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFR 98 (307)
T ss_pred ceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecc
Confidence 467788888899999999888888886 67999999999887 8899999999999999999999999999
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
+|.+.|+.++|+. ....+++|+.|.++++||.++... .+++.+....+ .+.++...+..+++|+.||+++.||+
T Consensus 99 gH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~-ePiQildea~D----~V~Si~v~~heIvaGS~DGtvRtydi 172 (307)
T KOG0316|consen 99 GHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSF-EPIQILDEAKD----GVSSIDVAEHEIVAGSVDGTVRTYDI 172 (307)
T ss_pred cccceeeEEEecC-cceEEEeccccceeEEEEcccCCC-CccchhhhhcC----ceeEEEecccEEEeeccCCcEEEEEe
Confidence 9999999999965 667889999999999999986543 34444433332 46677888999999999999999999
Q ss_pred CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 447 (538)
+.|+...... ..+|+|+.|+ ++..+.++.|+++++.|-.+|+.+..+++|.......-++++.....+++|++||.
T Consensus 173 R~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~ 250 (307)
T KOG0316|consen 173 RKGTLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGK 250 (307)
T ss_pred ecceeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCce
Confidence 9998766655 4589999999 66999999999999999999999999998877665555678888899999999999
Q ss_pred EEEEeCC--cceeeeccccce-EEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 448 IKVWRND--KFMKSMQTHKGS-VFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 448 i~iwd~~--~~~~~~~~h~~~-v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
+++||+- +.+..+..|... +.++++ .-..|+++. ++.+.+|-
T Consensus 251 Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~ 297 (307)
T KOG0316|consen 251 VYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT-GHGDLFWY 297 (307)
T ss_pred EEEEEeccceeeeeeccCCceeEEeeecccCccceeEec-CCceecee
Confidence 9999954 456666667666 667765 333444443 34455664
No 52
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=2e-28 Score=226.51 Aligned_cols=263 Identities=18% Similarity=0.273 Sum_probs=209.3
Q ss_pred ceeeeecc-CcceeEEeecCCeEEEEE----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 222 IDQARAAG-GVKDLVNGLSKGNVKFKD----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~~~~~~i~~----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
+..+.+-+ ....+++++.++.+.+|+ +.||..+|.+++|+ |..++|+|.|+.+++||+++|+++..+
T Consensus 217 vsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 217 VSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred cchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEE
Confidence 44444444 566677888888888887 56899999999999 999999999999999999999999988
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
. -...++|+.|.|++.+++++|+.|+.|+.||+++++..+.. ..+.. .. .-..|-++++++++.++|+++++|+
T Consensus 297 ~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY---d~hLg-~i-~~i~F~~~g~rFissSDdks~riWe 370 (503)
T KOG0282|consen 297 H-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY---DRHLG-AI-LDITFVDEGRRFISSSDDKSVRIWE 370 (503)
T ss_pred e-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH---Hhhhh-he-eeeEEccCCceEeeeccCccEEEEE
Confidence 7 34577999999999999999999999999999987633322 22221 11 1235667899999999999999999
Q ss_pred CCCCceeEEec-CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC---ceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 369 LLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 369 ~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
.+..-++.... .+.-...|+..+ +++++.-+.|+.|.++.+... .....+++|......+-+.|||||.+|++|
T Consensus 371 ~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SG 450 (503)
T KOG0282|consen 371 NRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSG 450 (503)
T ss_pred cCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEee
Confidence 98876655432 122234455555 679999999999999987543 233455666555555668999999999999
Q ss_pred eCCCcEEEEeCC--cceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEe
Q 009274 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd 490 (538)
+.||.+.+||.+ +.+..++.|.+++..+.| ....++|++.||.|++||
T Consensus 451 dsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 451 DSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999955 578899999999999988 567899999999999996
No 53
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.96 E-value=1.2e-27 Score=213.09 Aligned_cols=264 Identities=24% Similarity=0.382 Sum_probs=212.9
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
.-+.++.+.+++..+++++.++.++||++ .||...|..++++ -.|+++++.|+.|+.||++..+.++.+
T Consensus 152 gWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~Y 231 (460)
T KOG0285|consen 152 GWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHY 231 (460)
T ss_pred ceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHh
Confidence 45778899999999999999999999984 6899999999999 899999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
.+|-..|.|++.+|.. ..+++|+.|.++++||+++......+. ++.. ....+. +.+-...+++|+.|++|++||
T Consensus 232 hGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~~V~~l~---GH~~-~V~~V~-~~~~dpqvit~S~D~tvrlWD 305 (460)
T KOG0285|consen 232 HGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRASVHVLS---GHTN-PVASVM-CQPTDPQVITGSHDSTVRLWD 305 (460)
T ss_pred ccccceeEEEeccccc-eeEEecCCcceEEEeeecccceEEEec---CCCC-cceeEE-eecCCCceEEecCCceEEEee
Confidence 9999999999999854 577999999999999999765544443 3332 222232 233355799999999999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEeCC--EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
++.|+...++..|...|.+++.+++ .+++++.| .|+.|++..+..+..+.++ ... ...++...| .++++|+.+|
T Consensus 306 l~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh-~~i-intl~~nsD-~v~~~G~dng 381 (460)
T KOG0285|consen 306 LRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGH-NAI-INTLSVNSD-GVLVSGGDNG 381 (460)
T ss_pred eccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccc-cce-eeeeeeccC-ceEEEcCCce
Confidence 9999999999999999999999943 66777766 5999999999998887665 333 333566655 4788999999
Q ss_pred cEEEEeCCc--ceeee---cc-----ccceEEEEEe--CCCEEEEEeCCCeEEEEecCC
Q 009274 447 SIKVWRNDK--FMKSM---QT-----HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 447 ~i~iwd~~~--~~~~~---~~-----h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~ 493 (538)
.+..||.+. ..+.. .. ....|.+.+| .|..|++|..|.+|++|.-..
T Consensus 382 ~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 382 SIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred EEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 999999553 22221 11 2346777777 688999999999999997654
No 54
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=6.3e-27 Score=210.34 Aligned_cols=254 Identities=23% Similarity=0.357 Sum_probs=199.6
Q ss_pred cceeEEeecCCeEEEEEe--------ecCCCcEEEEEEc-----CCEEEEEeCCCcEEEEeCCCCceE----EEEecCCc
Q 009274 231 VKDLVNGLSKGNVKFKDL--------QGHRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDFSHV----HTFKGHDH 293 (538)
Q Consensus 231 ~~~~~~~~~~~~~~i~~l--------~~h~~~V~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~h~~ 293 (538)
...++++..+|..++|++ .||.++|.+++|. ...|+++|.|.++++|.++.++.. +.-++|..
T Consensus 115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~ 194 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKR 194 (423)
T ss_pred CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccc
Confidence 678899999999999884 5799999999886 346999999999999998876543 33459999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC----------------------CcceeeecccCCceeeeEEEEee-
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG----------------------HEPLKKWNEEKDWRYSGIHALTT- 350 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~- 350 (538)
.|.++...++ +..+++|+.|.+|.+|+..+... ..++....+|.. ++.++-+
T Consensus 195 ~V~sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~----~Vs~V~w~ 269 (423)
T KOG0313|consen 195 SVDSVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTE----PVSSVVWS 269 (423)
T ss_pred ceeEEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccccc----ceeeEEEc
Confidence 9999998774 55779999999999999332110 111222222222 2333333
Q ss_pred cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc--e-eEEEecCCCCc
Q 009274 351 SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS--L-LTVLEEDSSGA 425 (538)
Q Consensus 351 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~-~~~~~~~~~~~ 425 (538)
+...+++++.|.+|+.||+.++..+.++.+ ...++|+.++ .++|++|+.|..|++||.+++. . .+++.+| .+.
T Consensus 270 d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH-~nw 347 (423)
T KOG0313|consen 270 DATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH-KNW 347 (423)
T ss_pred CCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecc-hhh
Confidence 356899999999999999999999988874 5678999998 5699999999999999999864 2 4455555 456
Q ss_pred eEEEEEEcC-CCCEEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe-CCCEEEEEeCCCeEEEEecC
Q 009274 426 VSSVLSLTA-VQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 426 ~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~ 492 (538)
+.. +.|+| +..+|++|+.|+++++||.+. ++..+.+|...|.++.| ++..+++||.|++++++.-.
T Consensus 348 Vss-vkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 348 VSS-VKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hhh-eecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 665 46666 456789999999999999664 77889999999999999 77799999999999998654
No 55
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.96 E-value=7.1e-28 Score=204.69 Aligned_cols=277 Identities=21% Similarity=0.279 Sum_probs=222.6
Q ss_pred EeecCCCcEEEEEEc-----CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 247 DLQGHRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
...||+.+|-.++|+ |-+|++++.|+.-.+-+-++|.-+.+|.+|.+.|++..... +....++++.|-+-++||
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAKVWD 87 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhhhhh
Confidence 467999999999998 78899999999999999999999999999999999988754 555678999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCCCeEEEEEe--CCEEEEE
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLAVC--NGVLYSG 398 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (538)
.-++.....+.. .++...++|+.|.++|++|+.+..+++||++..+ +..++.+|.+.|..+.|. ++.++++
T Consensus 88 a~tgdelhsf~h------khivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSS 161 (334)
T KOG0278|consen 88 AVTGDELHSFEH------KHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSS 161 (334)
T ss_pred hhhhhhhhhhhh------hheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEee
Confidence 988765544432 1444567899999999999999999999998754 567889999999999998 7799999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecccc-ceEEEEEeCCC
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHK-GSVFAVFLEGK 475 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~-~~v~~~~~~~~ 475 (538)
+.|++||+||.++++.++++...+. +. .+.++++|++|.++. .+.|.+||... +++.++... -.-.++.|+..
T Consensus 162 add~tVRLWD~rTgt~v~sL~~~s~--Vt-SlEvs~dG~ilTia~-gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~ 237 (334)
T KOG0278|consen 162 ADDKTVRLWDHRTGTEVQSLEFNSP--VT-SLEVSQDGRILTIAY-GSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKE 237 (334)
T ss_pred ccCCceEEEEeccCcEEEEEecCCC--Cc-ceeeccCCCEEEEec-CceeEEeccccccceeeccCccccccccccCCCc
Confidence 9999999999999999999987543 33 378999999777654 56899999654 444444322 12235667889
Q ss_pred EEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEE-EEEECCCeEEEEEcC
Q 009274 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKL-FVGCADRTVKVYYYG 537 (538)
Q Consensus 476 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~v~vw~~~ 537 (538)
.+++|+.|..++.||..+++...... . .+.+.+.+.-+.|+|.+ ++|+.||+|++|...
T Consensus 238 ~fVaGged~~~~kfDy~TgeEi~~~n-k--gh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 238 FFVAGGEDFKVYKFDYNTGEEIGSYN-K--GHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred eEEecCcceEEEEEeccCCceeeecc-c--CCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 99999999999999999988665531 1 12444555556678874 569999999999864
No 56
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.2e-26 Score=228.59 Aligned_cols=265 Identities=19% Similarity=0.318 Sum_probs=213.9
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 290 (538)
+-...|.+.-.-++++...|.+++|+ |..|.++|..++|+ +.+++||+.|-.|++|++.+.+++.++.+
T Consensus 12 vKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G 91 (1202)
T KOG0292|consen 12 VKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG 91 (1202)
T ss_pred ccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc
Confidence 34456667777889999999999998 46899999999999 89999999999999999999999999999
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECC
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~ 370 (538)
|-+.|..+.|++ .-..++|+|.|.+|+||++.+.++...+. +|. ++..+..|+|..+.++++|-|.+|++||+.
T Consensus 92 HlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavlt---GHn--HYVMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 92 HLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLT---GHN--HYVMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred ccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEe---cCc--eEEEeeccCCccceEEEecccceEEEEeec
Confidence 999999999988 45578999999999999999876554444 333 556677889989999999999999999984
Q ss_pred CC-----------------------------ceeEEecCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCce--eEE
Q 009274 371 DG-----------------------------TLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSL--LTV 417 (538)
Q Consensus 371 ~~-----------------------------~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~--~~~ 417 (538)
.- -..+.+.||...|+-++|++ .+++||+.|+.|++|.+..-+. +.+
T Consensus 166 GLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDt 245 (1202)
T KOG0292|consen 166 GLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 245 (1202)
T ss_pred chhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehh
Confidence 21 01235679999999999996 6999999999999999976542 444
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEE--EeCCCEEEEEeCCCeEEEEecCC
Q 009274 418 LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~--~~~~~~l~sgs~dg~v~iwd~~~ 493 (538)
..+|. +.+.+ +-|+|..+++++.++|++|++||. ++.+++++...+.-+.+ .|..++++.| .|+-+.+|.++.
T Consensus 246 crgH~-nnVss-vlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VFkleR 322 (1202)
T KOG0292|consen 246 CRGHY-NNVSS-VLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVFKLER 322 (1202)
T ss_pred hhccc-CCcce-EEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEEEEcc
Confidence 55554 44444 579999999999999999999995 45778886655555554 4567766555 677788888764
Q ss_pred Ce
Q 009274 494 DE 495 (538)
Q Consensus 494 ~~ 495 (538)
..
T Consensus 323 Er 324 (1202)
T KOG0292|consen 323 ER 324 (1202)
T ss_pred cC
Confidence 43
No 57
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.96 E-value=6.6e-27 Score=225.26 Aligned_cols=273 Identities=26% Similarity=0.426 Sum_probs=220.2
Q ss_pred EEEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceE--EEEecCCcCeEE-EEEecCCCCEEEEEcCCCcEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHV--HTFKGHDHKVMA-VVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~h~~~v~~-l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
-..+.||+..|..+++. +..++++|.||++++|+-...+.+ ..+.+|.+.|.. ++|.+.++..+++|+.|.+|.+|
T Consensus 7 s~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~ 86 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVF 86 (745)
T ss_pred EEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEE
Confidence 45689999999999988 778999999999999997655543 457778888877 88877666678999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSG 398 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~ 398 (538)
..........++ .|. ..+++++.... .+++||+|.++++|- .+++...+.+|+..|++++.- .+.++||
T Consensus 87 ~~~~~~P~~~Lk---gH~----snVC~ls~~~~~~~iSgSWD~TakvW~--~~~l~~~l~gH~asVWAv~~l~e~~~vTg 157 (745)
T KOG0301|consen 87 KLSQAEPLYTLK---GHK----SNVCSLSIGEDGTLISGSWDSTAKVWR--IGELVYSLQGHTASVWAVASLPENTYVTG 157 (745)
T ss_pred ecCCCCchhhhh---ccc----cceeeeecCCcCceEecccccceEEec--chhhhcccCCcchheeeeeecCCCcEEec
Confidence 988665444444 333 24667774333 589999999999997 456777799999999999877 6699999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC-CcceeeeccccceEEEEEe--CCC
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN-DKFMKSMQTHKGSVFAVFL--EGK 475 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~h~~~v~~~~~--~~~ 475 (538)
|.|.+|++|.- ++.++++.+|. ..+.. +++-+++ .+++++.||.|+.|+. +..+..+.+|+.-+.+++. ++.
T Consensus 158 saDKtIklWk~--~~~l~tf~gHt-D~VRg-L~vl~~~-~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~ 232 (745)
T KOG0301|consen 158 SADKTIKLWKG--GTLLKTFSGHT-DCVRG-LAVLDDS-HFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDG 232 (745)
T ss_pred cCcceeeeccC--Cchhhhhccch-hheee-eEEecCC-CeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCC
Confidence 99999999974 78889998864 44444 4555543 5889999999999996 7899999999999999984 899
Q ss_pred EEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 476 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.++++++|++++||+.. ++.+...+. ..++..+.+..+|.+++|++||.||||...
T Consensus 233 ~Ivs~gEDrtlriW~~~--e~~q~I~lP----ttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 233 LIVSTGEDRTLRIWKKD--ECVQVITLP----TTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred eEEEecCCceEEEeecC--ceEEEEecC----ccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 99999999999999987 443333332 445667777889999999999999999764
No 58
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=7.2e-26 Score=215.37 Aligned_cols=263 Identities=29% Similarity=0.456 Sum_probs=218.0
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
..+..+.+.+++..++++..++.+.+|++ .+|...+.++.|+ ++++++++.||.|++||+.+++....+
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~ 89 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTL 89 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEE
Confidence 44777888888888888888998888874 4688899999998 669999999999999999998889999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
..|...+.++.|+++ ..++++++.||.+++||+.+.+....+. .+. .......+++++.++++++.|+.|++||
T Consensus 90 ~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~--~~i~~~~~~~~~~~l~~~~~~~~i~i~d 163 (289)
T cd00200 90 TGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLR---GHT--DWVNSVAFSPDGTFVASSSQDGTIKLWD 163 (289)
T ss_pred eccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEec---cCC--CcEEEEEEcCcCCEEEEEcCCCcEEEEE
Confidence 999999999999986 5688888889999999998544332222 221 1233456777778888888899999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
+++++.+..+..|...+.++.|++ +.+++++.|+.+++||+++++.+..+..+. ..+.. +.+++++.++++++.||
T Consensus 164 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~~~~~~~~~ 241 (289)
T cd00200 164 LRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNS-VAFSPDGYLLASGSEDG 241 (289)
T ss_pred ccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC-CceEE-EEEcCCCcEEEEEcCCC
Confidence 999999999999999999999993 389999999999999999988887775443 33333 68999988888888899
Q ss_pred cEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 447 SIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 447 ~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
.+++||.. +....+..|...+.++.+ ++++|++++.||.+++|+
T Consensus 242 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 242 TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99999965 567777889999999987 668999999999999996
No 59
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=1e-25 Score=218.71 Aligned_cols=306 Identities=23% Similarity=0.379 Sum_probs=237.1
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
+.+.+....++...++.|..+|.+++|+ +.||..+|+++.|+ |..|+|||.|+.|.+||+-...-...+
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL 145 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRL 145 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEe
Confidence 3566777777888889999999999997 46899999999999 999999999999999999888888999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
++|...|+..-|.. +..++++.+.|+.|++||+++..+.. ....+ ...+.++..+++.+++++.|+.+++|+
T Consensus 146 ~GHkd~iT~~~F~~-~~~~lvS~sKDs~iK~WdL~tqhCf~---Thvd~----r~Eiw~l~~~~~~lvt~~~dse~~v~~ 217 (888)
T KOG0306|consen 146 RGHKDSITQALFLN-GDSFLVSVSKDSMIKFWDLETQHCFE---THVDH----RGEIWALVLDEKLLVTAGTDSELKVWE 217 (888)
T ss_pred ecchHHHhHHhccC-CCeEEEEeccCceEEEEecccceeee---EEecc----cceEEEEEEecceEEEEecCCceEEEE
Confidence 99999999998876 67799999999999999998754333 22222 223556666678888999999999998
Q ss_pred CCCC----------------------------------------------------------------------------
Q 009274 369 LLDG---------------------------------------------------------------------------- 372 (538)
Q Consensus 369 ~~~~---------------------------------------------------------------------------- 372 (538)
+...
T Consensus 218 L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~ 297 (888)
T KOG0306|consen 218 LAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETE 297 (888)
T ss_pred eecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcccc
Confidence 8100
Q ss_pred ------------------------------------ce------------------------------eEEecCCCCCeE
Q 009274 373 ------------------------------------TL------------------------------SCTMSGHKSAVS 386 (538)
Q Consensus 373 ------------------------------------~~------------------------------~~~~~~h~~~v~ 386 (538)
.. ..++.+|...|.
T Consensus 298 e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVR 377 (888)
T KOG0306|consen 298 ENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVR 377 (888)
T ss_pred ccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhee
Confidence 00 012347888999
Q ss_pred EEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccc
Q 009274 387 TLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH 463 (538)
Q Consensus 387 ~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h 463 (538)
+++++ ++.++..+..+.+++|+..+.++++++... ...+..|-|.++++++|...|.+.+||.. ..+.+++.|
T Consensus 378 sl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~----y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AH 453 (888)
T KOG0306|consen 378 SLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG----YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAH 453 (888)
T ss_pred EEEeecCceeeeecCCCcEEEEEccCcceeEEeccc----cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhcc
Confidence 99999 555555556789999999999999999754 33335889999999999999999999954 567788899
Q ss_pred cceEEEEEe--CCCEEEEEeCCCeEEEEecCC-------CeeEeeeecCCcccCCCceEEE-EEeCCEE-EEEECCCeEE
Q 009274 464 KGSVFAVFL--EGKWLFTGGWDKTVSVQELAG-------DEFEEDVIPTGAIPCGSVITAL-LYWQGKL-FVGCADRTVK 532 (538)
Q Consensus 464 ~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l-~sg~~dg~v~ 532 (538)
.+.+++++. |+..+++||.|.+|++||..- .+......+...+.-...+.++ ++||+++ +++=-|.+|+
T Consensus 454 dgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVk 533 (888)
T KOG0306|consen 454 DGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVK 533 (888)
T ss_pred ccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEE
Confidence 999998874 999999999999999999741 1111222233323333344444 5567775 5577899999
Q ss_pred EEEcC
Q 009274 533 VYYYG 537 (538)
Q Consensus 533 vw~~~ 537 (538)
||-+.
T Consensus 534 VyflD 538 (888)
T KOG0306|consen 534 VYFLD 538 (888)
T ss_pred EEEec
Confidence 99764
No 60
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.2e-26 Score=202.11 Aligned_cols=239 Identities=20% Similarity=0.349 Sum_probs=193.4
Q ss_pred EEEEEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 243 VKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
.++|.+..|.++|+++|+++.++++||.|-+|+|||+.+...+..+-.|.+.|+++.|.++-.
T Consensus 34 ~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S----------------- 96 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLS----------------- 96 (362)
T ss_pred eccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcc-----------------
Confidence 357889999999999999999999999999999999999999999999999999999976321
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR 400 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~ 400 (538)
.+.|++|+.||.|.+|+....+++..+++|.+.|+.++.+ +.+.++.+.
T Consensus 97 -----------------------------~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~ 147 (362)
T KOG0294|consen 97 -----------------------------KSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGG 147 (362)
T ss_pred -----------------------------hhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcC
Confidence 1268999999999999999999999999999999999999 568889999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe-CCCEE
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL-EGKWL 477 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~-~~~~l 477 (538)
|+.++.||+-+|+....+...+. ...+.|+|.|.+++.++.+ .|-+|.++. ....+. ....+.|+.| ++..|
T Consensus 148 D~~lr~WNLV~Gr~a~v~~L~~~---at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~-~~~r~l~~~~l~~~~L 222 (362)
T KOG0294|consen 148 DQVLRTWNLVRGRVAFVLNLKNK---ATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIE-NPKRILCATFLDGSEL 222 (362)
T ss_pred CceeeeehhhcCccceeeccCCc---ceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhh-ccccceeeeecCCceE
Confidence 99999999999987766665433 2236899999999988876 588997553 222222 2255777777 89999
Q ss_pred EEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE-EeC---CEEEEEECCCeEEEEEcC
Q 009274 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL-YWQ---GKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~l~sg~~dg~v~vw~~~ 537 (538)
++|+.|+.|.+||..+......+.. |...+-.++ +.+ ..|+++++||.|+|||+.
T Consensus 223 ~vG~d~~~i~~~D~ds~~~~~~~~A-----H~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~ 281 (362)
T KOG0294|consen 223 LVGGDNEWISLKDTDSDTPLTEFLA-----HENRVKDIASYTNPEHEYLVTASSDGFIKVWDID 281 (362)
T ss_pred EEecCCceEEEeccCCCccceeeec-----chhheeeeEEEecCCceEEEEeccCceEEEEEcc
Confidence 9999999999999997654433332 333444444 332 358899999999999985
No 61
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=6.7e-26 Score=202.83 Aligned_cols=262 Identities=17% Similarity=0.273 Sum_probs=202.3
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 289 (538)
.+..+...+....++++..+....+|+ +.+|++.|+|+.|+ |.+||||+.+|.|+||+..++.....+.
T Consensus 66 svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~ 145 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD 145 (399)
T ss_pred ceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee
Confidence 355555555555566666666555555 67999999999999 9999999999999999999999988887
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
..-..+.=+.|+| ...++++|+.||.+-+|.+.+.. ..+.+..+. ....+-.|.|+|+.++++..||+|++||.
T Consensus 146 ~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~---~~kv~~Gh~--~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ 219 (399)
T KOG0296|consen 146 QEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQA---LCKVMSGHN--SPCTCGEFIPDGKRILTGYDDGTIIVWNP 219 (399)
T ss_pred cccCceEEEEecc-cccEEEeecCCCcEEEEECCCcc---eeeEecCCC--CCcccccccCCCceEEEEecCceEEEEec
Confidence 6667778888888 66788999999999999998653 333333333 22334588999999999999999999999
Q ss_pred CCCceeEEecC---------------------------------------------------CCCCeEEEEEe---C--C
Q 009274 370 LDGTLSCTMSG---------------------------------------------------HKSAVSTLAVC---N--G 393 (538)
Q Consensus 370 ~~~~~~~~~~~---------------------------------------------------h~~~v~~l~~~---~--~ 393 (538)
.+++++..+.. +...+.|+.+. . .
T Consensus 220 ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lp 299 (399)
T KOG0296|consen 220 KTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLP 299 (399)
T ss_pred CCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccc
Confidence 99987766541 00111122211 1 2
Q ss_pred EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEE
Q 009274 394 VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF 471 (538)
Q Consensus 394 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~ 471 (538)
+.++|+.||+|.|||+...+..+..... ..+.. +.|-+ ..+|++++.+|.|+.|| +++++..+.+|+..|.++.
T Consensus 300 L~A~G~vdG~i~iyD~a~~~~R~~c~he--~~V~~-l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ 375 (399)
T KOG0296|consen 300 LAACGSVDGTIAIYDLAASTLRHICEHE--DGVTK-LKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFA 375 (399)
T ss_pred hhhcccccceEEEEecccchhheeccCC--CceEE-EEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEE
Confidence 6788899999999999887766665543 33555 45666 78999999999999999 5578899999999999876
Q ss_pred e--CCCEEEEEeCCCeEEEEecC
Q 009274 472 L--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 472 ~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
. +.++++|+|.|++.+||+..
T Consensus 376 ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 376 LSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EcCCCcEEEEecCCCeEEEEecC
Confidence 5 99999999999999999864
No 62
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=7.6e-27 Score=199.03 Aligned_cols=234 Identities=18% Similarity=0.316 Sum_probs=191.5
Q ss_pred CCCcEEEEEEc---CCEEEEEeCCCcEEEEeCC-CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 009274 251 HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLK-DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (538)
Q Consensus 251 h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (538)
-.+.+..++|+ .+.+++++.||++++||+. ...+++.++.|...|.++.|++.....+++++.|++|++|+...+.
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~ 138 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN 138 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence 45789999998 7899999999999999964 3467889999999999999999888899999999999999987654
Q ss_pred CCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEecCC
Q 009274 327 GHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDG 402 (538)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg 402 (538)
.+..+.++....+ -..++| .++.++++|.|+++++||++.......+..|...+.|+.|+ .+.+++|+.|+
T Consensus 139 ---Sv~Tf~gh~~~Iy--~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~ 213 (311)
T KOG0277|consen 139 ---SVQTFNGHNSCIY--QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDN 213 (311)
T ss_pred ---ceEeecCCccEEE--EEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCc
Confidence 3444555443222 235666 46799999999999999998755555588999999999999 66999999999
Q ss_pred cEEEEECCCCc-eeEEEecCCCCceEEEEEEcCC-CCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe---CC
Q 009274 403 TIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---EG 474 (538)
Q Consensus 403 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~---~~ 474 (538)
.|+.||+++.+ ++..+.+| .-. ...+.++|. ...|++++.|-+++|||.. ..+.+...|+.-+..+.| ++
T Consensus 214 ~vr~wDir~~r~pl~eL~gh-~~A-VRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~ 291 (311)
T KOG0277|consen 214 LVRGWDIRNLRTPLFELNGH-GLA-VRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDP 291 (311)
T ss_pred eEEEEehhhccccceeecCC-ceE-EEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccC
Confidence 99999999865 45666544 233 333688886 4689999999999999954 366777889999998876 88
Q ss_pred CEEEEEeCCCeEEEEec
Q 009274 475 KWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~ 491 (538)
.++++.+.|+.++||+.
T Consensus 292 ~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 292 GQVASTGWDELLYVWNP 308 (311)
T ss_pred ceeeecccccceeeecc
Confidence 99999999999999984
No 63
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-26 Score=197.11 Aligned_cols=240 Identities=17% Similarity=0.244 Sum_probs=199.1
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
-++||..+++.+.++ |++|++++.|.++.+|-..+|+.+.++.+|++.|+++.... +...+++|+.|.++++||+.+
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEEEcCC
Confidence 478999999999999 99999999999999999999999999999999999999865 556789999999999999999
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-----CCcEEEEECC-------CCceeEEecCCCCCeEEEEEe-
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-----DRTIKAWSLL-------DGTLSCTMSGHKSAVSTLAVC- 391 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~~- 391 (538)
++.....+.. .....+.|+++|++++...+ .+.|.++|++ +.++...+..+.+.++..-|.
T Consensus 84 Gk~la~~k~~------~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 84 GKQLATWKTN------SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred CcEEEEeecC------CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 8765554432 22234588899998777754 3689999998 456677888889999999998
Q ss_pred -CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc---------------
Q 009274 392 -NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--------------- 455 (538)
Q Consensus 392 -~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------------- 455 (538)
+.+|++|..||.|..||+++++....-...|...+.. +.++++..++++++.|.+-++||...
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind-~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~ 236 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKIND-LQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNT 236 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCceeeechhhhcccccc-ccccCCcceEEecccCccceeeeccceeeEEEeeecccccc
Confidence 7899999999999999999986654443333444444 79999999999999999999998431
Q ss_pred ------------------------------------------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 456 ------------------------------------------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 456 ------------------------------------------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
.+..+++|-++|+++++ +|+..++|+.||.||+.-.
T Consensus 237 aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 237 AAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred eecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 12345778999998876 9999999999999999866
Q ss_pred CCC
Q 009274 492 AGD 494 (538)
Q Consensus 492 ~~~ 494 (538)
...
T Consensus 317 d~~ 319 (327)
T KOG0643|consen 317 DSN 319 (327)
T ss_pred ccc
Confidence 543
No 64
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.95 E-value=1e-26 Score=203.58 Aligned_cols=282 Identities=14% Similarity=0.255 Sum_probs=220.7
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC------------------CceEEEEecCCcCeEEEEEecCCC
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD------------------FSHVHTFKGHDHKVMAVVYVDEDQ 305 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~------------------~~~~~~~~~h~~~v~~l~~~~~~~ 305 (538)
..+..|+.++.+-+|+ |.+++|||.|-+|+|.|++. .-.++++..|.++|+++.|+| ..
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP-re 184 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP-RE 184 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc-hh
Confidence 3477899999999999 99999999999999999861 134678889999999999999 55
Q ss_pred CEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe---cCCC
Q 009274 306 PLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHK 382 (538)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~ 382 (538)
.+|++|+.|++|+++|+.........+.+... ......+++|.|.++++|...-++++||+++-++...- ..|+
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~---~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht 261 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDT---EPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT 261 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhhcc---ceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc
Confidence 68899999999999999866554444444332 33446688999999999999999999999998875443 4689
Q ss_pred CCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Cccee
Q 009274 383 SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMK 458 (538)
Q Consensus 383 ~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~ 458 (538)
+.|+++.++ +++.++++.||.|++||--+++++.++...|.+...+...|..+++++++.+.|..+++|.+ +.++.
T Consensus 262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~ 341 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLK 341 (430)
T ss_pred cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEE
Confidence 999999999 66999999999999999999999999988888887777899999999999999999999984 45666
Q ss_pred eecccc--ceE---EEEEe--CCCEEEEEeC-CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEEEECC
Q 009274 459 SMQTHK--GSV---FAVFL--EGKWLFTGGW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFVGCAD 528 (538)
Q Consensus 459 ~~~~h~--~~v---~~~~~--~~~~l~sgs~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sg~~d 528 (538)
.+.+-. +.. +...| ...+++.-.+ .+.+.-||.++.......... +...+..+.. | +.-+++|+.|
T Consensus 342 ~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slg----Hn~a~R~i~HSP~~p~FmTcsdD 417 (430)
T KOG0640|consen 342 EYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLG----HNGAVRWIVHSPVEPAFMTCSDD 417 (430)
T ss_pred EEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccC----CCCCceEEEeCCCCCceeeeccc
Confidence 665531 111 12233 4455555543 467899999887643332221 3444555444 4 3448999999
Q ss_pred CeEEEEE
Q 009274 529 RTVKVYY 535 (538)
Q Consensus 529 g~v~vw~ 535 (538)
-.+++|.
T Consensus 418 ~raRFWy 424 (430)
T KOG0640|consen 418 FRARFWY 424 (430)
T ss_pred ceeeeee
Confidence 9999996
No 65
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.95 E-value=2.2e-27 Score=208.87 Aligned_cols=263 Identities=15% Similarity=0.210 Sum_probs=220.9
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEee-----------------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDLQ-----------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD 281 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-----------------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~ 281 (538)
.+.++.++++++.+++++.+|-+.+|++. -|.++|.|++|+ ...+++|+.||.|++|.+.+
T Consensus 215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~t 294 (508)
T KOG0275|consen 215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIET 294 (508)
T ss_pred chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEec
Confidence 47799999999999999999999999853 478999999999 78999999999999999999
Q ss_pred CceEEEEe-cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC
Q 009274 282 FSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG 360 (538)
Q Consensus 282 ~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 360 (538)
|.+++.|. .|+..|+|+.|+.++. .+++++.|.++++--+.+++..+.++ ++..+ ..-..++++|..+++++.
T Consensus 295 G~ClRrFdrAHtkGvt~l~FSrD~S-qiLS~sfD~tvRiHGlKSGK~LKEfr---GHsSy--vn~a~ft~dG~~iisaSs 368 (508)
T KOG0275|consen 295 GQCLRRFDRAHTKGVTCLSFSRDNS-QILSASFDQTVRIHGLKSGKCLKEFR---GHSSY--VNEATFTDDGHHIISASS 368 (508)
T ss_pred chHHHHhhhhhccCeeEEEEccCcc-hhhcccccceEEEeccccchhHHHhc---Ccccc--ccceEEcCCCCeEEEecC
Confidence 99999997 8999999999998665 55899999999999998776554444 33322 223468889999999999
Q ss_pred CCcEEEEECCCCceeEEecC--CCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCC-CceEEEEEEcC
Q 009274 361 DRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS-GAVSSVLSLTA 434 (538)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~ 434 (538)
||+|++|+..+.+++.+++. ..-+|+++-.- +..+++|...+++++.++ .|+.++.+..... +.-.-..+.+|
T Consensus 369 DgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSp 447 (508)
T KOG0275|consen 369 DGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSP 447 (508)
T ss_pred CccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEEecC
Confidence 99999999999999998864 34567777765 559999999999999998 4677777764332 22222358899
Q ss_pred CCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEE--eCCCEEEEEeCCCeEEEEe
Q 009274 435 VQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 435 ~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~--~~~~~l~sgs~dg~v~iwd 490 (538)
.|.++.+.+.|+.++.|. .++...++..|...+..+. |..+.+++-+.||.+++|.
T Consensus 448 kGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 448 KGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 999999999999999998 5678888999999988886 5888999999999999995
No 66
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.95 E-value=1.5e-27 Score=209.82 Aligned_cols=277 Identities=19% Similarity=0.280 Sum_probs=221.1
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe--------cCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK--------GHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
|...-+.|..|+ |++|++||.||-|.+||..+|+..+.++ -+..+|.|+.|+.+. .++++|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDs-EMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDS-EMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccH-HHhhccCcCCcEEE
Confidence 455678899999 9999999999999999999988765543 477899999998854 47799999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
|.+.++.+...+.. .+. .-..+..|+.|+..+++++.|.++++.-+.+|+++..+++|.+.|+...|. +..+++
T Consensus 290 Wri~tG~ClRrFdr---AHt-kGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iis 365 (508)
T KOG0275|consen 290 WRIETGQCLRRFDR---AHT-KGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIIS 365 (508)
T ss_pred EEEecchHHHHhhh---hhc-cCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEE
Confidence 99998876554432 111 222356778889999999999999999999999999999999999999998 569999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCC-CceEEEEEEcCCCCEEEEEeCCCcEEEEeC-Ccceeeeccc----cceEEE-E
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSS-GAVSSVLSLTAVQHTLVVSHESGSIKVWRN-DKFMKSMQTH----KGSVFA-V 470 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~h----~~~v~~-~ 470 (538)
++.||+|++|+.++.+++.+++.... -.+.+++-+..+...++++...+++++-+. ++.++.+..- ..-|.+ +
T Consensus 366 aSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~l 445 (508)
T KOG0275|consen 366 ASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAIL 445 (508)
T ss_pred ecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEe
Confidence 99999999999999999999876443 345555666777889999999999999995 4556665431 223443 4
Q ss_pred EeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEEEE
Q 009274 471 FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 471 ~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~vw~ 535 (538)
++.|.++++.+.|+.++.|.+.++++....... ...++...-.| .+.+++-+.||.+++|.
T Consensus 446 SpkGewiYcigED~vlYCF~~~sG~LE~tl~Vh----EkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 446 SPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVH----EKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cCCCcEEEEEccCcEEEEEEeecCceeeeeecc----cccccccccCcccchhhhhcccchhhhcC
Confidence 679999999999999999999999876655432 33344444444 44577889999999995
No 67
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=3.7e-26 Score=200.63 Aligned_cols=299 Identities=20% Similarity=0.360 Sum_probs=221.8
Q ss_pred ceeEEeecCCeEE---EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCC
Q 009274 232 KDLVNGLSKGNVK---FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQP 306 (538)
Q Consensus 232 ~~~~~~~~~~~~~---i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 306 (538)
..+++.+.++.+. +..+.||++.|+.++.. ...+.+++.|.+.+||.+++++++.++.+|.+.|+++.|++ .+.
T Consensus 125 srivssFk~~t~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~-s~~ 203 (481)
T KOG0300|consen 125 SRIVSSFKDGTVKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHN-SGL 203 (481)
T ss_pred chheeeecCCceeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEecc-ccc
Confidence 3456666666643 34589999999999987 67899999999999999999999999999999999999988 566
Q ss_pred EEEEEcCCCcEEEEEc----cCCCCCc---------------------------------ceeeecccCCceeeeEEEEe
Q 009274 307 LCISGDSGGGIFVWSF----SFPLGHE---------------------------------PLKKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 307 ~l~s~~~dg~i~vwd~----~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~ 349 (538)
++++++.|++..||.. ..++... ++..+..+.. ......+-
T Consensus 204 L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~--vV~a~dWL 281 (481)
T KOG0300|consen 204 LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRA--VVSACDWL 281 (481)
T ss_pred eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeecccc--ceEehhhh
Confidence 8899999999999962 1111000 0000111110 01111233
Q ss_pred ecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc-eeEEEecCCCCce
Q 009274 350 TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAV 426 (538)
Q Consensus 350 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~ 426 (538)
..++.++++++|.+..+||+++++++..+.||....+.++-+ ..++++.+.|.+.++||.+..- .+..|++|.. .+
T Consensus 282 ~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtd-tV 360 (481)
T KOG0300|consen 282 AGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTD-TV 360 (481)
T ss_pred cCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeeccccc-ce
Confidence 467899999999999999999999999999999999988887 4589999999999999998543 3566666644 44
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 427 SSVLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 427 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
.+ ..|..+ ..+++|+.|.+|++||+++ ++.++.. .++++.+.. .+..|+.--.+..|++||+++..+.....
T Consensus 361 TS-~vF~~d-d~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPr 437 (481)
T KOG0300|consen 361 TS-VVFNTD-DRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPR 437 (481)
T ss_pred eE-EEEecC-CceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCc
Confidence 44 355554 4689999999999999665 4555543 355665554 55577777777899999999988655432
Q ss_pred cCCcccCCCceEEEEEeCC----EEEEEECCCeEEEEEcCC
Q 009274 502 PTGAIPCGSVITALLYWQG----KLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~----~l~sg~~dg~v~vw~~~~ 538 (538)
.. .-.+...+++++|.+. .|++++.|..+.-|+++.
T Consensus 438 ts-RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 438 TS-RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred cc-ccccceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 22 2225567777777644 389999999999999863
No 68
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=3.5e-27 Score=200.52 Aligned_cols=257 Identities=19% Similarity=0.303 Sum_probs=207.7
Q ss_pred cCcceeEEeecCCeEE---------EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEE
Q 009274 229 GGVKDLVNGLSKGNVK---------FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMA 297 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~---------i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 297 (538)
+.+-.+++++.++..- +-+|.||+++|++.+.+ ....++++.|-+-++||.-+|..+++|+ |..-|.+
T Consensus 27 p~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~ 105 (334)
T KOG0278|consen 27 PDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKA 105 (334)
T ss_pred CCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeee
Confidence 4555666666666544 34599999999999998 5667889999999999999999999987 8899999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE
Q 009274 298 VVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT 377 (538)
Q Consensus 298 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 377 (538)
++|+.+ ...+++|+.+..++++|++.++. +...+..+... +.. .-|....+.+++.+.|++|++||.+++..+++
T Consensus 106 ~af~~d-s~~lltgg~ekllrvfdln~p~A--pp~E~~ghtg~-Ir~-v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~s 180 (334)
T KOG0278|consen 106 VAFSQD-SNYLLTGGQEKLLRVFDLNRPKA--PPKEISGHTGG-IRT-VLWCHEDKCILSSADDKTVRLWDHRTGTEVQS 180 (334)
T ss_pred EEeccc-chhhhccchHHHhhhhhccCCCC--CchhhcCCCCc-cee-EEEeccCceEEeeccCCceEEEEeccCcEEEE
Confidence 999875 45679999999999999986543 22333333321 111 23444566788889999999999999999999
Q ss_pred ecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CC
Q 009274 378 MSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--ND 454 (538)
Q Consensus 378 ~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~ 454 (538)
+. ...+|+++.++ ++.+++-...+.|.+||..+...+..++.+. .+.+ .+++|+...+++|++|..++.|| ++
T Consensus 181 L~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~--nV~S-ASL~P~k~~fVaGged~~~~kfDy~Tg 256 (334)
T KOG0278|consen 181 LE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC--NVES-ASLHPKKEFFVAGGEDFKVYKFDYNTG 256 (334)
T ss_pred Ee-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCcc--cccc-ccccCCCceEEecCcceEEEEEeccCC
Confidence 87 57889999999 7788888889999999999999988887643 2333 58999999999999999999998 45
Q ss_pred cceeee-ccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 455 KFMKSM-QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 455 ~~~~~~-~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
..+..+ ++|.++|.|+.| +|...++||.||+|++|....++
T Consensus 257 eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 257 EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 555554 899999999987 99999999999999999987654
No 69
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=2.5e-25 Score=216.15 Aligned_cols=277 Identities=20% Similarity=0.286 Sum_probs=221.2
Q ss_pred EEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 246 KDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
.++.||...|.+++++ .+.++..+..+++++|+..+.++++++... .+.+..|.| +.+++++|...|.+.++|+.+
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~--y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdlaS 443 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG--YILASKFVP-GDRYIVLGTKNGELQVFDLAS 443 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc--cEEEEEecC-CCceEEEeccCCceEEEEeeh
Confidence 4577999999999999 555555555779999999999999998754 889999998 667889999999999999987
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC-----CceeE--Ee-----cCCCCCeEEEEEe-
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-----GTLSC--TM-----SGHKSAVSTLAVC- 391 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~-----~~~~~--~~-----~~h~~~v~~l~~~- 391 (538)
......++.+.+ .....+.+||+..+++||.|.+|++||..- +...+ .+ -.-...|.|+.++
T Consensus 444 ~~l~Eti~AHdg-----aIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp 518 (888)
T KOG0306|consen 444 ASLVETIRAHDG-----AIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP 518 (888)
T ss_pred hhhhhhhhcccc-----ceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence 765555553222 222457889999999999999999999741 11111 11 1235689999999
Q ss_pred -CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEE--eCCcceeeeccccceEE
Q 009274 392 -NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW--RNDKFMKSMQTHKGSVF 468 (538)
Q Consensus 392 -~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~h~~~v~ 468 (538)
+.+|+++--|.++++|-+.+.+..-.+.+|.- ++.+ +.++||++++++|+.|.+|++| |.+.+-+.+-+|+..|.
T Consensus 519 dgk~LaVsLLdnTVkVyflDtlKFflsLYGHkL-PV~s-mDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm 596 (888)
T KOG0306|consen 519 DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKL-PVLS-MDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVM 596 (888)
T ss_pred CCcEEEEEeccCeEEEEEecceeeeeeeccccc-ceeE-EeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCcee
Confidence 55999999999999999999998888888754 3343 7999999999999999999999 57889999999999999
Q ss_pred EEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEc
Q 009274 469 AVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYY 536 (538)
Q Consensus 469 ~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~ 536 (538)
++.| ....+.++|.|+.|+-||-...+....+... +..+...+.+++| .+++++.|..|++|..
T Consensus 597 ~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H----~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 597 SVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGH----HSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred EEEEcccceeEEEecCcceEEeechhhhhhheeeccc----hheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 9987 7889999999999999998887765544332 3334444555655 6888999999999975
No 70
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=1.4e-24 Score=217.41 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=174.5
Q ss_pred EeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc
Q 009274 247 DLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
.+.||.+.|++++|+ +++|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|.+..++++++.|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 378999999999998 579999999999999999764 3567889999999999999988789999999999
Q ss_pred EEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-EEEEEe--CC
Q 009274 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-STLAVC--NG 393 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~--~~ 393 (538)
|++||+.++... ..+..+.. ....+++++++++|++++.|+.|++||+++++.+..+.+|.+.. ..+.|. ++
T Consensus 150 VrIWDl~tg~~~---~~l~~h~~--~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~ 224 (493)
T PTZ00421 150 VNVWDVERGKAV---EVIKCHSD--QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKD 224 (493)
T ss_pred EEEEECCCCeEE---EEEcCCCC--ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCC
Confidence 999999876432 22222222 23346788999999999999999999999999999999897654 455666 45
Q ss_pred EEEEEe----cCCcEEEEECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCc--ceeeecc-cc
Q 009274 394 VLYSGS----RDGTIRLWSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK--FMKSMQT-HK 464 (538)
Q Consensus 394 ~l~s~s----~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~~~~~-h~ 464 (538)
.+++++ .|+.|++||+++... +.....+.. .......++++++++++++ .|+.|++||+.+ ....... +.
T Consensus 225 ~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~-~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~ 303 (493)
T PTZ00421 225 LIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQS-SALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSV 303 (493)
T ss_pred eEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCC-CceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCC
Confidence 666554 479999999987653 333333322 2333457899999999887 599999999653 3333222 33
Q ss_pred ceEEEEEeCCCEEEEEeCCCeEEEEecCCC
Q 009274 465 GSVFAVFLEGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 465 ~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
.++.++++..++-+-...--..|+|.+...
T Consensus 304 ~~~~g~~~~pk~~~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 304 EPHKGLCMMPKWSLDTRKCEIARFYALTYH 333 (493)
T ss_pred CCCcceEecccccccccceeeeEEEEecCC
Confidence 344455442222222222223466666544
No 71
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=3.2e-24 Score=214.78 Aligned_cols=235 Identities=14% Similarity=0.244 Sum_probs=172.6
Q ss_pred CCEEEEEeCCCcEEEEeCCC----------CceE---EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 262 GGFLFSSSFDKSIHVWSLKD----------FSHV---HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~----------~~~~---~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
+..+++++.+.....|+... |+.. ..+.+|.+.|.+++|+|.++.++++|+.|++|++||+.+....
T Consensus 32 ~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~ 111 (493)
T PTZ00421 32 CSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT 111 (493)
T ss_pred CCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc
Confidence 44555555555555555433 2211 2467899999999999966778999999999999999764321
Q ss_pred ----cceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecC
Q 009274 329 ----EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (538)
Q Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~d 401 (538)
..+..+..+.. ....++|+|++ ++|++|+.|++|++||+++++.+..+.+|...|.+++|+ +.+|++++.|
T Consensus 112 ~~~~~~l~~L~gH~~--~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D 189 (493)
T PTZ00421 112 QNISDPIVHLQGHTK--KVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD 189 (493)
T ss_pred cccCcceEEecCCCC--cEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence 22333444332 23356788875 699999999999999999999999999999999999999 5699999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe----CCCcEEEEeCCcc---eeeeccccc-eEEEEE--
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH----ESGSIKVWRNDKF---MKSMQTHKG-SVFAVF-- 471 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~---~~~~~~h~~-~v~~~~-- 471 (538)
++|++||+++++.+..+..+....... +.|.+++..+++++ .|+.|++||.++. ......+.. .+....
T Consensus 190 g~IrIwD~rsg~~v~tl~~H~~~~~~~-~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d 268 (493)
T PTZ00421 190 KKLNIIDPRDGTIVSSVEAHASAKSQR-CLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFD 268 (493)
T ss_pred CEEEEEECCCCcEEEEEecCCCCcceE-EEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEc
Confidence 999999999999888887664433333 46777777777654 4789999997653 333333332 333333
Q ss_pred eCCCEEEEEe-CCCeEEEEecCCCeeEee
Q 009274 472 LEGKWLFTGG-WDKTVSVQELAGDEFEED 499 (538)
Q Consensus 472 ~~~~~l~sgs-~dg~v~iwd~~~~~~~~~ 499 (538)
+++++|++++ .|+.|++||+.+++....
T Consensus 269 ~d~~~L~lggkgDg~Iriwdl~~~~~~~~ 297 (493)
T PTZ00421 269 EDTNLLYIGSKGEGNIRCFELMNERLTFC 297 (493)
T ss_pred CCCCEEEEEEeCCCeEEEEEeeCCceEEE
Confidence 3888888887 599999999998876544
No 72
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=7.9e-26 Score=223.49 Aligned_cols=280 Identities=16% Similarity=0.269 Sum_probs=192.5
Q ss_pred EEee-cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----------CeEEEEEec---C-CCCEE
Q 009274 246 KDLQ-GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----------KVMAVVYVD---E-DQPLC 308 (538)
Q Consensus 246 ~~l~-~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----------~v~~l~~~~---~-~~~~l 308 (538)
..+. .|.++|+++.|+ |+|||+|+.|+.|+||.+...+....-.+... .+..+.-++ . .....
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3456 899999999999 99999999999999999865322111000000 000000000 0 00000
Q ss_pred EEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEE
Q 009274 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (538)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (538)
-.+.....+.+-+....-...++..+.+| ...++.+++..+ +|++++.|.+|++|++...+++..|. |.+.|+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GH----t~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGH----TADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhcc----chhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 11111122222111111223344444443 345788888755 99999999999999999999999987 9999999
Q ss_pred EEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeec---
Q 009274 388 LAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQ--- 461 (538)
Q Consensus 388 l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--- 461 (538)
++|+ ++++++||-|+.++||++...+.+.-...+ .. .+.+++.|||+..++|+.+|.+++|++........
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~--~l-ITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I 491 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR--DL-ITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI 491 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhh--hh-heeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence 9999 669999999999999999888776655443 33 44479999999999999999999999764322111
Q ss_pred --------cccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCC
Q 009274 462 --------THKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADR 529 (538)
Q Consensus 462 --------~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg 529 (538)
.|. .|+.+.+ +...+++.+.|..|||+|.++..+...+..... ....+.+-+..||. +++|++|.
T Consensus 492 ~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n--~~SQ~~Asfs~Dgk~IVs~seDs 568 (712)
T KOG0283|consen 492 RLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN--TSSQISASFSSDGKHIVSASEDS 568 (712)
T ss_pred eeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc--CCcceeeeEccCCCEEEEeecCc
Confidence 123 7999876 445688888999999999988776655543322 44455665555654 88899999
Q ss_pred eEEEEEc
Q 009274 530 TVKVYYY 536 (538)
Q Consensus 530 ~v~vw~~ 536 (538)
.|++|++
T Consensus 569 ~VYiW~~ 575 (712)
T KOG0283|consen 569 WVYIWKN 575 (712)
T ss_pred eEEEEeC
Confidence 9999997
No 73
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.3e-25 Score=221.98 Aligned_cols=230 Identities=20% Similarity=0.301 Sum_probs=197.1
Q ss_pred CCCccceeeeeccCcceeEEeecCCeEEEEE-------------------------------------------------
Q 009274 217 SDGADIDQARAAGGVKDLVNGLSKGNVKFKD------------------------------------------------- 247 (538)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------------------------------------------------- 247 (538)
.....|.++.|+.++++++++..|+.+++|.
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 3456699999999999999999999999986
Q ss_pred --------------------eecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCC
Q 009274 248 --------------------LQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQP 306 (538)
Q Consensus 248 --------------------l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 306 (538)
|.||.+.|..++|+ +++|+++|.|.+||+|++...+++..|. |.+.|+|++|+|.+.+
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDr 423 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDR 423 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCC
Confidence 23699999999999 9999999999999999999999999987 9999999999999999
Q ss_pred EEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec--CC---
Q 009274 307 LCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS--GH--- 381 (538)
Q Consensus 307 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~h--- 381 (538)
+|++|+-||.++||++... .+..|..-. .....+++.|+|+..++|+.+|.+++|+....+...... .|
T Consensus 424 yFiSGSLD~KvRiWsI~d~----~Vv~W~Dl~--~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 424 YFISGSLDGKVRLWSISDK----KVVDWNDLR--DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKK 497 (712)
T ss_pred cEeecccccceEEeecCcC----eeEeehhhh--hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCc
Confidence 9999999999999998743 333444333 334456999999999999999999999998776655431 11
Q ss_pred ---CCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 009274 382 ---KSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (538)
Q Consensus 382 ---~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 453 (538)
...|+.+.|. .+.+++.+.|..|+|+|.++..++..+++.+.........|+.||++|++++.|..|++|+.
T Consensus 498 k~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 498 KKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred cccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 2279999998 34799999999999999999999999998776665555789999999999999999999985
No 74
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.94 E-value=2e-26 Score=209.15 Aligned_cols=261 Identities=16% Similarity=0.290 Sum_probs=211.8
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEeec-----------CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQG-----------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-----------h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
..+..+.+..+...++++..+..+++|+..+ -.++|+++.|. +.++++++.|+.+++|++.+.+...
T Consensus 176 gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~ 255 (459)
T KOG0288|consen 176 GEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRH 255 (459)
T ss_pred cccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhh
Confidence 4466777778888899999999999888544 44679999998 8999999999999999999999999
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
++.+|++.|+++.|...... +++|+.|.+|++||+....+...+.... .+..+...+..+++|..|++|++
T Consensus 256 TLsGHtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~k~~C~kt~l~~S--------~cnDI~~~~~~~~SgH~DkkvRf 326 (459)
T KOG0288|consen 256 TLSGHTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQKAYCSKTVLPGS--------QCNDIVCSISDVISGHFDKKVRF 326 (459)
T ss_pred hhcccccceeeehhhccccc-eeeccccchhhhhhhhhhheeccccccc--------cccceEecceeeeecccccceEE
Confidence 99999999999999764443 8999999999999998755444333211 12233333667899999999999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCC--CCceEEEEEEcCCCCEEEEE
Q 009274 367 WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS--SGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 442 (538)
||.++..+......+. .|+++..+ +..+++++.|.++.+.|+++.+..+.+.... .+.-.+...|||++.|+++|
T Consensus 327 wD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAG 405 (459)
T KOG0288|consen 327 WDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAG 405 (459)
T ss_pred EeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeec
Confidence 9999999999988765 89999988 4588999999999999999999887776431 11113336899999999999
Q ss_pred eCCCcEEEEe--CCcceeeeccccc--eEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 443 HESGSIKVWR--NDKFMKSMQTHKG--SVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 443 ~~dg~i~iwd--~~~~~~~~~~h~~--~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
+.||.|+||+ .+++...+..... .|++++| .|..+++++.++.+.+|.
T Consensus 406 S~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 406 SADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred cCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999 4456666655443 5999998 789999999999999993
No 75
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=5.5e-26 Score=217.35 Aligned_cols=261 Identities=21% Similarity=0.310 Sum_probs=202.8
Q ss_pred cCcceeEEeecCCeEEEEEe---------------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC--ceEEEEe
Q 009274 229 GGVKDLVNGLSKGNVKFKDL---------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHTFK 289 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~l---------------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~ 289 (538)
++++.++++..+|.+++|.. +.|.++|+.++.. ++.|+++|.|-+|++|+...+ -++.++.
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir 114 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR 114 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence 45567889999999988874 4577888887776 789999999999999999876 5678889
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC--C---cceeeecccCCceeeeEEEEe--ecCCEEEEeeCCC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG--H---EPLKKWNEEKDWRYSGIHALT--TSGRYLYTGSGDR 362 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~--~~~~~l~sg~~dg 362 (538)
.|.+.|.|+++...+..++++|+.|+.|.+||++++.. . ..+....... .+..++.++. +.|..+++|+..+
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~s-G~k~siYSLA~N~t~t~ivsGgtek 193 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGS-GPKDSIYSLAMNQTGTIIVSGGTEK 193 (735)
T ss_pred cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCC-CCccceeeeecCCcceEEEecCccc
Confidence 99999999999666778999999999999999997633 1 1111111110 1223344444 4455999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 009274 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (538)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 440 (538)
.+++||.++++.+..+.||+..|.++..+ +..++++|.||+|++||+...+++.++..|..+ +. .+..+|+=..++
T Consensus 194 ~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~-VW-aL~~~~sf~~vY 271 (735)
T KOG0308|consen 194 DLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG-VW-ALQSSPSFTHVY 271 (735)
T ss_pred ceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc-eE-EEeeCCCcceEE
Confidence 99999999999999999999999999998 559999999999999999999999999888766 33 367788889999
Q ss_pred EEeCCCcEEEEeCCcce--eeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 441 VSHESGSIKVWRNDKFM--KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 441 ~~~~dg~i~iwd~~~~~--~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+|+.||.|..=|+++.. ..+-....+|..+.. +.+-+-+++.|+.|+-|...
T Consensus 272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred ecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence 99999999998876531 111123344544443 34445777889999999764
No 76
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=5.9e-24 Score=213.70 Aligned_cols=226 Identities=12% Similarity=0.152 Sum_probs=172.5
Q ss_pred EeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC-----cceeeecccCCcee
Q 009274 268 SSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-----EPLKKWNEEKDWRY 342 (538)
Q Consensus 268 ~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~~~~ 342 (538)
|+.++.|++|+......+..+.+|.+.|.+++|+|+++.++++|+.||+|++||+.+.... ..+..+..+. ..
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~--~~ 127 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK--KK 127 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCC--Cc
Confidence 6678999999998888889999999999999999987889999999999999999764321 1122222332 22
Q ss_pred eeEEEEeecCCE-EEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEe
Q 009274 343 SGIHALTTSGRY-LYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLE 419 (538)
Q Consensus 343 ~~~~~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 419 (538)
...++|+|++.. +++++.|++|++||+++++.+..+. |...|.+++|+ +.+|++++.|+.|++||+++++.+..+.
T Consensus 128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~ 206 (568)
T PTZ00420 128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH 206 (568)
T ss_pred EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 345678887774 5789999999999999998877775 66789999998 5688889999999999999999998888
Q ss_pred cCCCCceEEE---EEEcCCCCEEEEEeCCC----cEEEEeCCc---ceeeecc--ccceEEEE-Ee-CCCEEEEEeCCCe
Q 009274 420 EDSSGAVSSV---LSLTAVQHTLVVSHESG----SIKVWRNDK---FMKSMQT--HKGSVFAV-FL-EGKWLFTGGWDKT 485 (538)
Q Consensus 420 ~~~~~~~~~~---~~~~~~~~~l~~~~~dg----~i~iwd~~~---~~~~~~~--h~~~v~~~-~~-~~~~l~sgs~dg~ 485 (538)
.|.......+ ..+++++.++++++.|+ +|++||.+. ++..+.. +.+.+... .. ++.++++|+.|++
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~t 286 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGN 286 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCe
Confidence 7654322222 23468889999988774 799999664 4443322 22333222 22 5889999999999
Q ss_pred EEEEecCCCee
Q 009274 486 VSVQELAGDEF 496 (538)
Q Consensus 486 v~iwd~~~~~~ 496 (538)
|++|++..+..
T Consensus 287 Ir~~e~~~~~~ 297 (568)
T PTZ00420 287 CRYYQHSLGSI 297 (568)
T ss_pred EEEEEccCCcE
Confidence 99999987653
No 77
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=6.7e-25 Score=203.65 Aligned_cols=266 Identities=21% Similarity=0.328 Sum_probs=202.9
Q ss_pred CCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 252 RDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 252 ~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
.++|++++|+ ..-+++.+ .-.+.||+..+....+++......|.++.|-. ++.++++|+..|.|+++|+.+ .
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~-DG~LlaaGD~sG~V~vfD~k~---r 100 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRS-DGRLLAAGDESGHVKVFDMKS---R 100 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeec-CCeEEEccCCcCcEEEecccc---H
Confidence 3789999999 33344443 33699999988888888877889999999966 567999999999999999654 1
Q ss_pred cceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEecCCcE
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTI 404 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i 404 (538)
..+..+..+. .......|+++++ .+++|++|+.+++||+.+......+.+|++.|.|.+|+ +..++|||.||+|
T Consensus 101 ~iLR~~~ah~--apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 101 VILRQLYAHQ--APVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred HHHHHHhhcc--CceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 2233333332 2223457777655 88999999999999999988766899999999999999 3489999999999
Q ss_pred EEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe--CCCEEE
Q 009274 405 RLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL--EGKWLF 478 (538)
Q Consensus 405 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~--~~~~l~ 478 (538)
++||++.. ..+..+.. ...+.. +.+-|.|..+++++.. .+++||+- +.+..+..|...|+|+.+ ++..|+
T Consensus 179 rl~DtR~~~~~v~elnh--g~pVe~-vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLl 254 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVELNH--GCPVES-VLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLL 254 (487)
T ss_pred EEEEeccCCceeEEecC--CCceee-EEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecCCceEe
Confidence 99999987 45555543 444555 4677888888888754 79999943 344455559999999988 779999
Q ss_pred EEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeC-CEEEEEECCCeEEE
Q 009274 479 TGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKV 533 (538)
Q Consensus 479 sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~v~v 533 (538)
+||-|+.|++||+.+-+........+ ++..+..+++ ..++.|..||.+.+
T Consensus 255 S~sLD~~VKVfd~t~~Kvv~s~~~~~-----pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 255 SGSLDRHVKVFDTTNYKVVHSWKYPG-----PVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred ecccccceEEEEccceEEEEeeeccc-----ceeeEEecCCCceEEEecccceeee
Confidence 99999999999988877766555432 2445555554 45888999998765
No 78
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=1.5e-24 Score=198.29 Aligned_cols=242 Identities=20% Similarity=0.275 Sum_probs=203.3
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
+..|+||...|+.+.++ ...+++++.|-.|+||.............|..+|+.+..+|.+ .+|++++.||+..+.|+
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w~Fsd~ 332 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTWAFSDI 332 (506)
T ss_pred hhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCC-cEEEEecCCceEEEEEc
Confidence 44589999999999999 7889999999999999998888888888999999999999855 47799999999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEec
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSR 400 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~s~ 400 (538)
+++......... ..........|+|||..|.+|+.||.|++||+.++..+..|.+|.++|..++|+ ++ ++++++.
T Consensus 333 ~~g~~lt~vs~~---~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~ad 409 (506)
T KOG0289|consen 333 SSGSQLTVVSDE---TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAAD 409 (506)
T ss_pred cCCcEEEEEeec---cccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEec
Confidence 987654333322 111223456899999999999999999999999999999999999999999999 44 8999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC----CcceeeeccccceEEEEEe--CC
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN----DKFMKSMQTHKGSVFAVFL--EG 474 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~----~~~~~~~~~h~~~v~~~~~--~~ 474 (538)
|+.|++||+|..+...++.......+.. +.|.+.|.+|+.++.|=+|++++. -+....+..|.+..+++.| ..
T Consensus 410 d~~V~lwDLRKl~n~kt~~l~~~~~v~s-~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~a 488 (506)
T KOG0289|consen 410 DGSVKLWDLRKLKNFKTIQLDEKKEVNS-LSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHA 488 (506)
T ss_pred CCeEEEEEehhhcccceeecccccccee-EEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccc
Confidence 9999999999999888887665443444 799999999999988877777772 2356667778888899998 67
Q ss_pred CEEEEEeCCCeEEEEec
Q 009274 475 KWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~ 491 (538)
++++++|.|..++++.+
T Consensus 489 q~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 489 QYLASTSMDAILRLYAL 505 (506)
T ss_pred eEEeeccchhheEEeec
Confidence 89999999999888764
No 79
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=6.4e-25 Score=202.24 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=195.7
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce-ee------e----ccc--CCceeeeEEEEeec
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KK------W----NEE--KDWRYSGIHALTTS 351 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~------~----~~~--~~~~~~~~~~~~~~ 351 (538)
...+..|.-++.+++++|++. +.++++.||+|.-|++.+++....+ .. . ... ......-.+++++|
T Consensus 135 ~~~~~~H~~s~~~vals~d~~-~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDK-RVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeecccc-ceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 445667999999999988655 6689999999999999887644111 11 0 001 11123345688999
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEE
Q 009274 352 GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (538)
Q Consensus 352 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (538)
+++|++|+.|..|.|||.++.+.++.+++|.+.|.+++|- .+.+++++.|+++++|++.....+.++.+|+.. +..
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~-v~~- 291 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG-VLG- 291 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc-eee-
Confidence 9999999999999999999999999999999999999999 559999999999999999998888888887653 333
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCccc
Q 009274 430 LSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIP 507 (538)
Q Consensus 430 ~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~ 507 (538)
+....-++.+-+|+.|+++++|++.. ....+.+|.+.+-|+++ +...+++||.||.|.+|++...+........+.+.
T Consensus 292 IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~ 371 (479)
T KOG0299|consen 292 IDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI 371 (479)
T ss_pred echhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeecccccc
Confidence 35555677788888999999999654 45567889999999998 99999999999999999998887655544333222
Q ss_pred CC-------CceEEEEE-e-CCEEEEEECCCeEEEEEcCC
Q 009274 508 CG-------SVITALLY-W-QGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 508 ~~-------~~~~~~~~-~-~~~l~sg~~dg~v~vw~~~~ 538 (538)
.. .++++++. + .+.+++|+.+|.|++|.+++
T Consensus 372 ~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~ 411 (479)
T KOG0299|consen 372 PELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIED 411 (479)
T ss_pred CCccccccccceeeeEecccCceEEecCCCCceEEEEecC
Confidence 22 24554443 4 44577899999999999863
No 80
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.94 E-value=1.2e-24 Score=209.77 Aligned_cols=248 Identities=26% Similarity=0.410 Sum_probs=200.5
Q ss_pred CcceeEEeecCCeEEEEE-----------eecCCCcEEE-EEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcC
Q 009274 230 GVKDLVNGLSKGNVKFKD-----------LQGHRDCVTG-LAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK 294 (538)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~-l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~ 294 (538)
.+..+++++.++++++|. +.+|.+.|.+ +++. +..+++|+.|.+|.+|......++.++++|...
T Consensus 24 ~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~sn 103 (745)
T KOG0301|consen 24 DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSN 103 (745)
T ss_pred CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccc
Confidence 344577777788888776 4567888877 7776 567999999999999999999999999999999
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEe-ecCCEEEEeeCCCcEEEEECCCCc
Q 009274 295 VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT-TSGRYLYTGSGDRTIKAWSLLDGT 373 (538)
Q Consensus 295 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~sg~~dg~i~iwd~~~~~ 373 (538)
|.++....++ .+++|+.|.++++|....... .+..|.. .+.++. ...+.++|||.|.+|++|.- ++
T Consensus 104 VC~ls~~~~~--~~iSgSWD~TakvW~~~~l~~-----~l~gH~a----sVWAv~~l~e~~~vTgsaDKtIklWk~--~~ 170 (745)
T KOG0301|consen 104 VCSLSIGEDG--TLISGSWDSTAKVWRIGELVY-----SLQGHTA----SVWAVASLPENTYVTGSADKTIKLWKG--GT 170 (745)
T ss_pred eeeeecCCcC--ceEecccccceEEecchhhhc-----ccCCcch----heeeeeecCCCcEEeccCcceeeeccC--Cc
Confidence 9999865433 379999999999998763222 2333322 222222 12338999999999999984 78
Q ss_pred eeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 374 LSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 374 ~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
.++++.+|.+.|+.+++- +..+++|+.||.|++|++ +++.+....+|. ..+.+ +....++..++++++|+++++|+
T Consensus 171 ~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ght-n~vYs-is~~~~~~~Ivs~gEDrtlriW~ 247 (745)
T KOG0301|consen 171 LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHT-NFVYS-ISMALSDGLIVSTGEDRTLRIWK 247 (745)
T ss_pred hhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccc-eEEEE-EEecCCCCeEEEecCCceEEEee
Confidence 999999999999999998 559999999999999999 788888877763 44444 56778888999999999999999
Q ss_pred CCcceeeeccccceEEEEEe-CCCEEEEEeCCCeEEEEecCC
Q 009274 453 NDKFMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 453 ~~~~~~~~~~h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~ 493 (538)
...+.+.+......|+++.. ...-+++|+.||.||||....
T Consensus 248 ~~e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 248 KDECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred cCceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 99999999888888998876 566688999999999998763
No 81
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=8.5e-24 Score=212.55 Aligned_cols=223 Identities=14% Similarity=0.189 Sum_probs=167.3
Q ss_pred EEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCc--------eEEEEecCCcCeEEEEEecCCCCEEEEEc
Q 009274 244 KFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFS--------HVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~--------~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 312 (538)
.+..+.+|.++|.+++|+ +++|+||+.|++|+|||+.++. .+..+.+|...|.+++|+|++..++++++
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe
Confidence 456789999999999998 5799999999999999997542 34567899999999999998887889999
Q ss_pred CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEE---
Q 009274 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLA--- 389 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~--- 389 (538)
.|++|++||++++.....+ ... .....++|+++|++|++++.|+.|++||+++++.+.++.+|.+.+.+..
T Consensus 146 ~DgtIrIWDl~tg~~~~~i---~~~---~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~ 219 (568)
T PTZ00420 146 FDSFVNIWDIENEKRAFQI---NMP---KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWI 219 (568)
T ss_pred CCCeEEEEECCCCcEEEEE---ecC---CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEe
Confidence 9999999999876533222 111 1233567889999999999999999999999999999999988754433
Q ss_pred --Ee--CCEEEEEecCC----cEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceee
Q 009274 390 --VC--NGVLYSGSRDG----TIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKS 459 (538)
Q Consensus 390 --~~--~~~l~s~s~dg----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~ 459 (538)
|+ ++++++++.|+ .|++||+++ ++++..+..+...........++++.++++|+.|+.|++|+... ....
T Consensus 220 ~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~ 299 (568)
T PTZ00420 220 DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRK 299 (568)
T ss_pred eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEe
Confidence 22 45888888774 799999995 55666654433222222233456688999999999999999643 2222
Q ss_pred ecc--ccceEEEEEe
Q 009274 460 MQT--HKGSVFAVFL 472 (538)
Q Consensus 460 ~~~--h~~~v~~~~~ 472 (538)
+.. +..++.++++
T Consensus 300 l~~~~s~~p~~g~~f 314 (568)
T PTZ00420 300 VNEYKSCSPFRSFGF 314 (568)
T ss_pred ecccccCCCccceEE
Confidence 222 4455556655
No 82
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=3.4e-24 Score=217.34 Aligned_cols=282 Identities=19% Similarity=0.200 Sum_probs=213.7
Q ss_pred CCCcEEEEEEc--CCEEEEEe--CCCcEEEEeCCC------------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 251 HRDCVTGLAVG--GGFLFSSS--FDKSIHVWSLKD------------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s--~dg~i~iwd~~~------------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
+...|.+++.+ +..++||+ .|+.++||+.+. .+.+.+...|.+.|.|+.|++++ .+||+|+.|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG-~~lAsGSDD 90 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDG-SYLASGSDD 90 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCC-CeEeeccCc
Confidence 45668899998 89999999 999999998642 24456677899999999999955 577999999
Q ss_pred CcEEEEEccCCCC---------Cc------ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec
Q 009274 315 GGIFVWSFSFPLG---------HE------PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (538)
Q Consensus 315 g~i~vwd~~~~~~---------~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 379 (538)
+.|.+|+...... .. ....+..|.. .. .-.+++|++.++++++.|++|.+||.++.+.+..+.
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~-DV-~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS-DV-LDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCC-cc-ceeccCCCccEEEEecccceEEEEccccceeeeeee
Confidence 9999999873100 00 1111222221 11 123788889999999999999999999999999999
Q ss_pred CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCC----CceEEEEEEcCCCCEEEEEeC----CCcEE
Q 009274 380 GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS----GAVSSVLSLTAVQHTLVVSHE----SGSIK 449 (538)
Q Consensus 380 ~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~----dg~i~ 449 (538)
+|.+.|..+.|+ +.++++-+.|++|++|++.+....+.+..+.. ......+.|+|||++|++... -.++.
T Consensus 169 ~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~ 248 (942)
T KOG0973|consen 169 GHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIA 248 (942)
T ss_pred cccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeE
Confidence 999999999999 88999999999999999888777666654322 233445799999999998643 34677
Q ss_pred EEeCC--cceeeeccccceEEEEEeC-------CC------------EEEEEeCCCeEEEEecCCCeeEeeeecCCcccC
Q 009274 450 VWRND--KFMKSMQTHKGSVFAVFLE-------GK------------WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPC 508 (538)
Q Consensus 450 iwd~~--~~~~~~~~h~~~v~~~~~~-------~~------------~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~ 508 (538)
|.+-+ +.-..+-+|..++.++.|+ .+ .+++||.|++|-||.....+........ ..
T Consensus 249 IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l---f~ 325 (942)
T KOG0973|consen 249 IIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL---FN 325 (942)
T ss_pred EEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh---hc
Confidence 77643 4567889999999999761 12 6889999999999999776654433322 13
Q ss_pred CCceEEEEEeCCE-EEEEECCCeEEEEEcCC
Q 009274 509 GSVITALLYWQGK-LFVGCADRTVKVYYYGK 538 (538)
Q Consensus 509 ~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~~ 538 (538)
.++.-..+.+||. |+++|.||+|.+..|.+
T Consensus 326 ~SI~DmsWspdG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 326 KSIVDMSWSPDGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred CceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence 3344444445776 89999999999998863
No 83
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=8e-23 Score=171.50 Aligned_cols=285 Identities=19% Similarity=0.249 Sum_probs=210.3
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC------C-----ce----EEEEecCCcCeEEEEEecCCCCEEEEEc
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD------F-----SH----VHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~------~-----~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 312 (538)
.....|.+++|+ |.+.+.|+...+.+|..... + ++ .+.-+.|.+.|+|.+|+|.+ .++++|+
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~g-eliatgs 108 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCG-ELIATGS 108 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCcc-CeEEecC
Confidence 456789999999 99999999999999875421 1 11 12234689999999999955 4889999
Q ss_pred CCCcEEEEEccCCCCCcc--eeeecccCCceeeeEEEEeec----CCEEEEee-CCCcEEEEECCCCceeEEecCCCCCe
Q 009274 313 SGGGIFVWSFSFPLGHEP--LKKWNEEKDWRYSGIHALTTS----GRYLYTGS-GDRTIKAWSLLDGTLSCTMSGHKSAV 385 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~h~~~v 385 (538)
.|.+|++..++...+... -..++.+... .. -++|--+ +..|++++ .|..|++-|..+|+..+.+.+|.+.|
T Consensus 109 ndk~ik~l~fn~dt~~~~g~dle~nmhdgt-ir-dl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghi 186 (350)
T KOG0641|consen 109 NDKTIKVLPFNADTCNATGHDLEFNMHDGT-IR-DLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHI 186 (350)
T ss_pred CCceEEEEecccccccccCcceeeeecCCc-ee-eeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccE
Confidence 999999987765433222 1222222221 11 1233222 33666655 47788899999999999999999999
Q ss_pred EEEE-EeCCEEEEEecCCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cce
Q 009274 386 STLA-VCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFM 457 (538)
Q Consensus 386 ~~l~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~ 457 (538)
.++- |++-++++|+.|.+|++||++-..++.++..... ......++..|.|++|++|-.|....+||++ .++
T Consensus 187 lalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~i 266 (350)
T KOG0641|consen 187 LALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMI 266 (350)
T ss_pred EEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCcee
Confidence 8874 5577999999999999999999888887753211 1233446899999999999999999999965 589
Q ss_pred eeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEE
Q 009274 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVY 534 (538)
Q Consensus 458 ~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw 534 (538)
+.+..|...|.|+.| ...++++++.|..|++=|+.+.-........-.-+....+.+-+.+.. .+++.+.|.++.+|
T Consensus 267 q~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 267 QRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred eeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEe
Confidence 999999999999987 667999999999999999986532111111111113446677676644 48899999999999
Q ss_pred EcC
Q 009274 535 YYG 537 (538)
Q Consensus 535 ~~~ 537 (538)
-++
T Consensus 347 a~~ 349 (350)
T KOG0641|consen 347 ALN 349 (350)
T ss_pred ccC
Confidence 875
No 84
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.1e-24 Score=206.16 Aligned_cols=234 Identities=21% Similarity=0.375 Sum_probs=199.6
Q ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec-CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
+.+.|+++.|+ |++|++|..+|.|.|||..+.+.+..+.+ |...|.+++|. ...+.+|+.|+.|..+|++....
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchh
Confidence 38999999999 99999999999999999999999999998 99999999995 56889999999999999987654
Q ss_pred CcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEe--cCC
Q 009274 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGS--RDG 402 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s--~dg 402 (538)
... ....|. .......+++|++++++|+.|+.+.|||....+++..+..|...|.+++|+ .++||+|+ .|+
T Consensus 293 ~~~--~~~~H~--qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 293 VVS--TLQGHR--QEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhh--hhhccc--ceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 433 122222 333456889999999999999999999998889999999999999999999 67999975 699
Q ss_pred cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE--eCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCE
Q 009274 403 TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS--HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKW 476 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~ 476 (538)
.|++||..+++.+..+... ...+.+.|++..+-|+++ ..++.|.||+.. +.+..+.+|...|..+++ ||..
T Consensus 369 ~i~fwn~~~g~~i~~vdtg---sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~ 445 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDSVDTG---SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGET 445 (484)
T ss_pred EEEEEEcCCCcEecccccC---CceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCE
Confidence 9999999999988887643 234447899988767664 467899999954 577889999999988765 9999
Q ss_pred EEEEeCCCeEEEEecCCC
Q 009274 477 LFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 477 l~sgs~dg~v~iwd~~~~ 494 (538)
+++|+.|.++++|++-+.
T Consensus 446 i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 446 IVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEecccCcEEeccccCC
Confidence 999999999999999764
No 85
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=1.5e-24 Score=202.19 Aligned_cols=272 Identities=16% Similarity=0.203 Sum_probs=208.3
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEeec--------------CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDLQG--------------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--------------h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 282 (538)
...|....+.+.+.++++|+.+-.+++|+|.| ....|++++|+ ++.|++.+.....+|+|-...
T Consensus 167 tk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~ 246 (641)
T KOG0772|consen 167 TKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGF 246 (641)
T ss_pred ceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCc
Confidence 34566777788899999999999999999876 23578999999 888888888889999996544
Q ss_pred ceEEE------------EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce-eeecccCCceeeeEEEEe
Q 009274 283 SHVHT------------FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 283 ~~~~~------------~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 349 (538)
+.... -++|...++|.+|+|.....|++++.||++++||+...+....+ +.............++|+
T Consensus 247 ~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~n 326 (641)
T KOG0772|consen 247 EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWN 326 (641)
T ss_pred eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecC
Confidence 43332 25799999999999999999999999999999999876644333 222222223444567999
Q ss_pred ecCCEEEEeeCCCcEEEEECCCCc--ee-EEecCCCC--CeEEEEEe--CCEEEEEecCCcEEEEECCCCc-eeEEEecC
Q 009274 350 TSGRYLYTGSGDRTIKAWSLLDGT--LS-CTMSGHKS--AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS-LLTVLEED 421 (538)
Q Consensus 350 ~~~~~l~sg~~dg~i~iwd~~~~~--~~-~~~~~h~~--~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~ 421 (538)
++++.|++|+.||.|.+||..+.. +. ..-.+|.. .|+||.|+ +++|++-+.|+++++||++..+ ++....+-
T Consensus 327 rdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL 406 (641)
T KOG0772|consen 327 RDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGL 406 (641)
T ss_pred CCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCC
Confidence 999999999999999999975432 22 22356877 99999999 7799999999999999999865 44444332
Q ss_pred CCCceEEEEEEcCCCCEEEEEeC------CCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHE------SGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
.......-++|+|+.++|++|+. .|++.+||..+ .++.+......|..+.| .-+.|..|+.||++++|-
T Consensus 407 ~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 407 PTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred CccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 22222233699999999999864 57899999654 45566666777888877 445788888899999873
No 86
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.93 E-value=2.3e-25 Score=202.41 Aligned_cols=278 Identities=17% Similarity=0.242 Sum_probs=217.2
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
...+..|.+.|..+.|- .+.|++|+.|..|++|++...+ .+.++.+..++|+++.|-++ ++.+++++.|+.+++|
T Consensus 168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~-~~~~iAas~d~~~r~W 246 (459)
T KOG0288|consen 168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSD-NKHVIAASNDKNLRLW 246 (459)
T ss_pred hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCC-CceEEeecCCCceeee
Confidence 45578899999999998 4899999999999999987666 67788888999999999774 5567889999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEec
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSR 400 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~ 400 (538)
++........+.. |.+. .. ...+......+++|+.|.+|+.||+....+..++. ..+.+..|..++..+++|..
T Consensus 247 nvd~~r~~~TLsG---Htdk-Vt-~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~~~~~~SgH~ 320 (459)
T KOG0288|consen 247 NVDSLRLRHTLSG---HTDK-VT-AAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCSISDVISGHF 320 (459)
T ss_pred eccchhhhhhhcc---cccc-ee-eehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEecceeeeeccc
Confidence 9987665555544 3221 11 11222333359999999999999999988887765 35667778777788999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeec------cccceEEEEEe
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQ------THKGSVFAVFL 472 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~------~h~~~v~~~~~ 472 (538)
|++|++||+++..+......+. .+. .+..++++..+.+++.|.++.+.|.+. ....+. +|.-.-..++|
T Consensus 321 DkkvRfwD~Rs~~~~~sv~~gg--~vt-Sl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSp 397 (459)
T KOG0288|consen 321 DKKVRFWDIRSADKTRSVPLGG--RVT-SLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSP 397 (459)
T ss_pred ccceEEEeccCCceeeEeecCc--cee-eEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECC
Confidence 9999999999999988887653 344 479999999999999999999999664 233332 24433345567
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEE
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~ 535 (538)
++.|+++||.||.|+||++.++++......... .+.++++.|. +..+++++.++.+.+|.
T Consensus 398 d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s---~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 398 DGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTS---NAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred CCceeeeccCCCcEEEEEccCceEEEEeccCCC---CcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999999999999999998776655432 2256666665 44599999999999993
No 87
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=6.9e-23 Score=180.89 Aligned_cols=278 Identities=14% Similarity=0.160 Sum_probs=210.7
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc-CCCcEEEEEccC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD-SGGGIFVWSFSF 324 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~ 324 (538)
+..-.+.|+++.|+ |.++++++.|.++++||..+++.++++..+...+..++|......++.+.. .|.+|+..++.+
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence 44466889999999 999999999999999999999999999999899999999876665544433 388999999986
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEecCC
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDG 402 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~s~dg 402 (538)
.+ .++-+.+|.. .+ ...+++|-++.+++++.|++|++||++..++...+.....+ ..+|+ .+ ++|++....
T Consensus 90 Nk---ylRYF~GH~~-~V-~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~ 162 (311)
T KOG1446|consen 90 NK---YLRYFPGHKK-RV-NSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSE 162 (311)
T ss_pred Cc---eEEEcCCCCc-eE-EEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCC
Confidence 54 4555555554 22 24577888899999999999999999988887776544444 45666 33 666666666
Q ss_pred cEEEEECCCC--ceeEEEecC-CCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceE----E-EEEe
Q 009274 403 TIRLWSLSDH--SLLTVLEED-SSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSV----F-AVFL 472 (538)
Q Consensus 403 ~i~iwd~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v----~-~~~~ 472 (538)
.|++||+|.- .+..++... ........+.|+|||++++.++..+.+++.| .+....++..+...- . +..|
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftP 242 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTP 242 (311)
T ss_pred eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECC
Confidence 9999999974 344455433 1222334479999999999999999999999 566777777665432 2 3346
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEc
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
|++++++|+.||+|.+|+++++......... +...+.++-+.+....-++.+..+.+|=.
T Consensus 243 ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~----~~~~~~~~~fnP~~~mf~sa~s~l~fw~p 302 (311)
T KOG1446|consen 243 DSKFVLSGSDDGTIHVWNLETGKKVAVLRGP----NGGPVSCVRFNPRYAMFVSASSNLVFWLP 302 (311)
T ss_pred CCcEEEEecCCCcEEEEEcCCCcEeeEecCC----CCCCccccccCCceeeeeecCceEEEEec
Confidence 9999999999999999999998876655543 34456666677777666777777888843
No 88
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=9.5e-24 Score=184.61 Aligned_cols=261 Identities=18% Similarity=0.218 Sum_probs=186.8
Q ss_pred CCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC-CceE-EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 251 HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-FSHV-HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 251 h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
-.+.|.+|+|+ ..+++++|.||+||+|+++. |..+ +....|.++|.+++|+.++ ..+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCC-ceEEeeccCCceEEEEccCC
Confidence 45789999999 67888999999999999976 3332 3445699999999998866 67799999999999999987
Q ss_pred CCCcceeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcE
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTI 404 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i 404 (538)
+. ..+..+.. ....+..+..- -..|+|||.|++|+.||.++..++.++. -...++++..-..+++++..++.|
T Consensus 105 Q~-~~v~~Hd~----pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~pm~vVata~r~i 178 (347)
T KOG0647|consen 105 QV-SQVAAHDA----PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLYPMAVVATAERHI 178 (347)
T ss_pred Ce-eeeeeccc----ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccCceeEEEecCCcE
Confidence 32 22222221 22223333332 2389999999999999999999998886 467788888888899999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC----cceeeeccccc---------eEEEEE
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND----KFMKSMQTHKG---------SVFAVF 471 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~h~~---------~v~~~~ 471 (538)
.+|+++++................+++...+....+.|+-+|.+.+..+. +.-.+++.|.. .|.+++
T Consensus 179 ~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~ 258 (347)
T KOG0647|consen 179 AVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIA 258 (347)
T ss_pred EEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceE
Confidence 99999876543322222223334446777777777999999999988643 33446666763 345566
Q ss_pred e--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEE
Q 009274 472 L--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLF 523 (538)
Q Consensus 472 ~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 523 (538)
| .-..|+|+|.||+..+||-........... +...+++..++ +|.++
T Consensus 259 FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~-----~~qpItcc~fn~~G~if 308 (347)
T KOG0647|consen 259 FHPVHGTLVTAGSDGTFSFWDKDARTKLKTSET-----HPQPITCCSFNRNGSIF 308 (347)
T ss_pred eecccceEEEecCCceEEEecchhhhhhhccCc-----CCCccceeEecCCCCEE
Confidence 6 667899999999999999876543222221 33345555554 66644
No 89
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=2.1e-23 Score=183.27 Aligned_cols=261 Identities=18% Similarity=0.221 Sum_probs=191.6
Q ss_pred CCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
.+.|+++.|+ ++.|+.+++||++++||+........++ |..++.+++|.+ ...+++|+.||.|+.+|+.++....
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD--ESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC--CceEEEeccCceEEEEEecCCccee
Confidence 5789999998 7788888899999999998876655555 899999999976 4467999999999999998765332
Q ss_pred ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEEC
Q 009274 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSL 409 (538)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~ 409 (538)
.. . |. ....++...+..+.+++|++|++|++||.++...+..+. ....|.++...++.|++|+.|..+.+||+
T Consensus 90 ig-t---h~--~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~g~~LvVg~~~r~v~iyDL 162 (323)
T KOG1036|consen 90 IG-T---HD--EGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVSGNRLVVGTSDRKVLIYDL 162 (323)
T ss_pred ec-c---CC--CceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEeccCCEEEEeecCceEEEEEc
Confidence 21 1 11 122244555557799999999999999999866666654 34589999999999999999999999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEE--eCC----cceeeeccccc---------eEEEEEe--
Q 009274 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW--RND----KFMKSMQTHKG---------SVFAVFL-- 472 (538)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw--d~~----~~~~~~~~h~~---------~v~~~~~-- 472 (538)
++.....+.....-...+.++++-|++.-.++++-||.|.+= |.. +....++.|.. +|.+++|
T Consensus 163 Rn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp 242 (323)
T KOG1036|consen 163 RNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHP 242 (323)
T ss_pred ccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecc
Confidence 987765544433333445556777888889999999998874 433 34455666643 6778877
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEEC
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCA 527 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~ 527 (538)
--+.|+||+.||.|.+||+...+....+... .. .+..+.+ .+|. |++|++
T Consensus 243 ~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~----~~-SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 243 IHGTFATGGSDGIVNIWDLFNRKRLKQLAKY----ET-SISSLSFSMDGSLLAIASS 294 (323)
T ss_pred ccceEEecCCCceEEEccCcchhhhhhccCC----CC-ceEEEEeccCCCeEEEEec
Confidence 5568999999999999999887644332221 12 2344444 4554 665553
No 90
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=8.3e-23 Score=201.02 Aligned_cols=311 Identities=19% Similarity=0.272 Sum_probs=236.1
Q ss_pred CCCCccceeeeeccCcceeEEeecCCeEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc
Q 009274 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH 293 (538)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 293 (538)
-++...++.+........+....-..+..+++++++...|+++.-+ =+.++.|..+|+|.++++..++.+.+|+...+
T Consensus 166 ~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g 245 (910)
T KOG1539|consen 166 LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWG 245 (910)
T ss_pred ecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEcccc
Confidence 3444455554443333333322223333455578899999999988 78999999999999999999999999996679
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee-----------------------------------------
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK----------------------------------------- 332 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----------------------------------------- 332 (538)
.|++++|..++..++++|+..|.+.+||++..+....+.
T Consensus 246 ~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR 325 (910)
T KOG1539|consen 246 RVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPR 325 (910)
T ss_pred ceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcch
Confidence 999999999999999999999999999987511000000
Q ss_pred --------------------------------------------------------------------------------
Q 009274 333 -------------------------------------------------------------------------------- 332 (538)
Q Consensus 333 -------------------------------------------------------------------------------- 332 (538)
T Consensus 326 ~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~ 405 (910)
T KOG1539|consen 326 LLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFEN 405 (910)
T ss_pred heeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeeccc
Confidence
Q ss_pred --------------------eeccc-----------C----CceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE
Q 009274 333 --------------------KWNEE-----------K----DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT 377 (538)
Q Consensus 333 --------------------~~~~~-----------~----~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 377 (538)
.|+.. . .......+++++-|++.+.|+..|.|-+|++.+|-....
T Consensus 406 ~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~s 485 (910)
T KOG1539|consen 406 AREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKS 485 (910)
T ss_pred chhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecc
Confidence 00000 0 000111226677789999999999999999999988888
Q ss_pred e---cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 378 M---SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 378 ~---~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
+ ..|.++|++++.+ +..+++++.+|.+++||..+...+..+..... ...+..+.....++.+..|-.|+++|
T Consensus 486 f~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~---~~~iv~hr~s~l~a~~~ddf~I~vvD 562 (910)
T KOG1539|consen 486 FGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSS---ITGIVYHRVSDLLAIALDDFSIRVVD 562 (910)
T ss_pred cccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCC---cceeeeeehhhhhhhhcCceeEEEEE
Confidence 8 5899999999998 67999999999999999999888888775433 22346666778899999999999999
Q ss_pred --CCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEE-EEeCC-EEEEEE
Q 009274 453 --NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQG-KLFVGC 526 (538)
Q Consensus 453 --~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~sg~ 526 (538)
+++..+.+.+|.+.|++++| ||++|++++.|++|++||+.++.+.-..... .++..+ ++|++ .|++..
T Consensus 563 ~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd------~~~~sls~SPngD~LAT~H 636 (910)
T KOG1539|consen 563 VVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVD------SPCTSLSFSPNGDFLATVH 636 (910)
T ss_pred chhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecC------CcceeeEECCCCCEEEEEE
Confidence 56788999999999999887 9999999999999999999999876554432 233334 44544 578887
Q ss_pred CC-CeEEEEE
Q 009274 527 AD-RTVKVYY 535 (538)
Q Consensus 527 ~d-g~v~vw~ 535 (538)
.| .-|++|-
T Consensus 637 vd~~gIylWs 646 (910)
T KOG1539|consen 637 VDQNGIYLWS 646 (910)
T ss_pred ecCceEEEEE
Confidence 77 7799995
No 91
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2e-22 Score=178.01 Aligned_cols=270 Identities=16% Similarity=0.182 Sum_probs=219.7
Q ss_pred CCccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeC--CCcEEEEeCCCCce
Q 009274 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSF--DKSIHVWSLKDFSH 284 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~--dg~i~iwd~~~~~~ 284 (538)
....+....++.++..+++...+..+++++. ..++-.|..++|. ...++.++. |.+||.-++.+.+.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky 92 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY 92 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence 3456788889999999999888878777763 3444567777776 666777766 89999999999999
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
++.|.||...|.++..+|-+ ..+++++.|++|++||++..++...+.. ...++.++.|+|-++|++.....|
T Consensus 93 lRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~~-------~~~pi~AfDp~GLifA~~~~~~~I 164 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLNL-------SGRPIAAFDPEGLIFALANGSELI 164 (311)
T ss_pred EEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEec-------CCCcceeECCCCcEEEEecCCCeE
Confidence 99999999999999999966 6789999999999999997766555544 233477999999999999988899
Q ss_pred EEEECCCC--ceeEEec---CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCc-eEEEEEEcCCC
Q 009274 365 KAWSLLDG--TLSCTMS---GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA-VSSVLSLTAVQ 436 (538)
Q Consensus 365 ~iwd~~~~--~~~~~~~---~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 436 (538)
++||++.- .+-.++. +.....+.+.|+ +++++.+...+.+++.|.-+|..+.++..+.... .....++.||+
T Consensus 165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds 244 (311)
T KOG1446|consen 165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDS 244 (311)
T ss_pred EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCC
Confidence 99999864 3444442 346778999999 5689999999999999999999998887664433 33346899999
Q ss_pred CEEEEEeCCCcEEEEeC--Ccceeeecc-ccceEEEEEeCCCEEEEEeCCCeEEEEecCCCe
Q 009274 437 HTLVVSHESGSIKVWRN--DKFMKSMQT-HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 437 ~~l~~~~~dg~i~iwd~--~~~~~~~~~-h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+++++|+.||+|.+|+. +..+..+.+ +.+++.++.|+.++...++.+..+.+|=....+
T Consensus 245 ~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 245 KFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDEDA 306 (311)
T ss_pred cEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEeccccc
Confidence 99999999999999995 456677777 788999999999988888889999999766443
No 92
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=4.7e-23 Score=180.26 Aligned_cols=257 Identities=18% Similarity=0.214 Sum_probs=197.9
Q ss_pred CCCCCccceeeeeccC-cceeEEeecCCeEEEEEeec-----------CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 009274 215 ENSDGADIDQARAAGG-VKDLVNGLSKGNVKFKDLQG-----------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (538)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~-----------h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~ 280 (538)
.+++...|....|++. +..++.++.++.+++|+++. |.++|.+++|+ |..+++|+.|+.+++||+.
T Consensus 23 ~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 23 PNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred CCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 3456667888889884 44555899999999999764 89999999999 9999999999999999999
Q ss_pred CCceEEEEecCCcCeEEEEEecCC-CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee
Q 009274 281 DFSHVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (538)
Q Consensus 281 ~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 359 (538)
++ .+..+..|.++|.++.|.+.. ..+|++|+.|.+|+.||.+.......+.... .+.+...-...++++.
T Consensus 103 S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe--------RvYa~Dv~~pm~vVat 173 (347)
T KOG0647|consen 103 SG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE--------RVYAADVLYPMAVVAT 173 (347)
T ss_pred CC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc--------eeeehhccCceeEEEe
Confidence 98 556678899999999998643 3478999999999999998655443333211 2345555566899999
Q ss_pred CCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC--ceeEEEecCCCC----c-e--
Q 009274 360 GDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH--SLLTVLEEDSSG----A-V-- 426 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~----~-~-- 426 (538)
.+..|.+|+++++...... ..-+-.++||+.. .+..+.|+-+|.+.+..+..+ +.-.+++.|... . +
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa 253 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA 253 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence 9999999999765432211 1123457888877 345699999999999999876 444556655421 1 2
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe--CCCEEEEE
Q 009274 427 SSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTG 480 (538)
Q Consensus 427 ~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 480 (538)
...++|+|....|++++.||++.+|| .+..++..+.|..+|++.+| +|.+++-+
T Consensus 254 VNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 254 VNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 23368999999999999999999998 55677888899999999998 67766654
No 93
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.93 E-value=7.4e-24 Score=195.37 Aligned_cols=253 Identities=16% Similarity=0.234 Sum_probs=199.4
Q ss_pred ecCCeEEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC----------ceEEEEecCCcCeEEEEEecCC
Q 009274 238 LSKGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF----------SHVHTFKGHDHKVMAVVYVDED 304 (538)
Q Consensus 238 ~~~~~~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~~~~~ 304 (538)
...+.+.+...-.|.+.|+.+.+. ...+++.+..+.|.|||..+. .+-..+.+|...-++++|++..
T Consensus 110 ~~~~~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~ 189 (422)
T KOG0264|consen 110 AVSGKVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ 189 (422)
T ss_pred ccccceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccccc
Confidence 445677777778899999999987 778888999999999998532 2233788999988999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCC----cceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECC--CCceeEE
Q 009274 305 QPLCISGDSGGGIFVWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLL--DGTLSCT 377 (538)
Q Consensus 305 ~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~--~~~~~~~ 377 (538)
...+++++.|++|++||+...... .....+..+.. ... -++|++ +.+.+++++.|+.+.|||+| +.++...
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~-~Ve-DV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHED-VVE-DVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCc-cee-hhhccccchhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 999999999999999999865542 22333333332 222 224554 45689999999999999999 5566777
Q ss_pred ecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCC-CCEEEEEeCCCcEEEEe
Q 009274 378 MSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWR 452 (538)
Q Consensus 378 ~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd 452 (538)
..+|.++|+|++|+ +..||+||.|++|.+||+|+.+ ++.++..|. ..+.. +.|+|+ ...|++++.|+.+.+||
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~-dev~~-V~WSPh~etvLASSg~D~rl~vWD 345 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHE-DEVFQ-VEWSPHNETVLASSGTDRRLNVWD 345 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCC-cceEE-EEeCCCCCceeEecccCCcEEEEe
Confidence 78999999999999 4589999999999999999865 567777664 44444 688886 46888999999999999
Q ss_pred CCc----------------ceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCC
Q 009274 453 NDK----------------FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 453 ~~~----------------~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+.+ ++..-.||...|..++| ....|++.+.|+.+.||+....
T Consensus 346 ls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~ 406 (422)
T KOG0264|consen 346 LSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN 406 (422)
T ss_pred ccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence 542 23555789999999988 4568999999999999998754
No 94
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.9e-24 Score=206.94 Aligned_cols=275 Identities=21% Similarity=0.368 Sum_probs=208.7
Q ss_pred cCCCcEE---EEEEc---CCEEEEEeCCCcEEEEeCCCCc------eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcE
Q 009274 250 GHRDCVT---GLAVG---GGFLFSSSFDKSIHVWSLKDFS------HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (538)
Q Consensus 250 ~h~~~V~---~l~~~---~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 317 (538)
.|...|. .+..+ +++|+|||.||.|++|+...-. ....++.|...|++++...+++ .+++++.|-+|
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~-tlIS~SsDtTV 97 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGK-TLISASSDTTV 97 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCC-ceEEecCCceE
Confidence 4555555 44444 7789999999999999985321 3667888999999999876544 67999999999
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEE-eecCCEEEEeeCCCcEEEEECCCC--ceeE--------Eec-CCCCCe
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL-TTSGRYLYTGSGDRTIKAWSLLDG--TLSC--------TMS-GHKSAV 385 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~sg~~dg~i~iwd~~~~--~~~~--------~~~-~h~~~v 385 (538)
++|+..... .........|.+ +..+.+. ..+...+++|+-|+.|.+||++++ +.+. .+. ++..+|
T Consensus 98 K~W~~~~~~-~~c~stir~H~D--YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~si 174 (735)
T KOG0308|consen 98 KVWNAHKDN-TFCMSTIRTHKD--YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSI 174 (735)
T ss_pred EEeecccCc-chhHhhhhcccc--hheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccce
Confidence 999988653 233333344443 2223344 556779999999999999999977 2222 233 788999
Q ss_pred EEEEEeCC--EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeec
Q 009274 386 STLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQ 461 (538)
Q Consensus 386 ~~l~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~ 461 (538)
++++.++. .+++|+..+.+++||.++.+.+..+.+|.. .+. ++-.++||..+++++.||+|++||++ .++.++.
T Consensus 175 YSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd-NVr-~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 175 YSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD-NVR-VLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred eeeecCCcceEEEecCcccceEEeccccccceeeeecccc-ceE-EEEEcCCCCeEeecCCCceEEeeeccccceeeeEE
Confidence 99999844 899999999999999999999999997754 333 36899999999999999999999976 5888999
Q ss_pred cccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC-eeEeeeecCCcccCCCceEEEEE--eCCEEEEEECCCeEEEEEc
Q 009274 462 THKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD-EFEEDVIPTGAIPCGSVITALLY--WQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 462 ~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~v~vw~~ 536 (538)
.|...|+++.. +=..+++|+.||.|+.=|+++. +....+....+ +..+.. .++.+-+++.|+.|+-|..
T Consensus 253 vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daP------v~~l~~~~~~~~~WvtTtds~I~rW~~ 326 (735)
T KOG0308|consen 253 VHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAP------VLKLHLHEHDNSVWVTTTDSSIKRWKL 326 (735)
T ss_pred eccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCc------hhhhhhccccCCceeeeccccceecCC
Confidence 99999999865 6678999999999999999884 33333333322 222222 2455688889999998875
No 95
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.92 E-value=2.6e-23 Score=181.10 Aligned_cols=276 Identities=22% Similarity=0.350 Sum_probs=194.6
Q ss_pred ecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCc----------eEEE-----EecCCcCeEEEEEecCCCCEEEE
Q 009274 249 QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFS----------HVHT-----FKGHDHKVMAVVYVDEDQPLCIS 310 (538)
Q Consensus 249 ~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~----------~~~~-----~~~h~~~v~~l~~~~~~~~~l~s 310 (538)
..|.+.|+++.+. |+++++|+.||.|.+||+++.. .+.. -.+|.-.|.++.|.|-+..+|.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 4588999999998 9999999999999999997532 1111 13588899999999999999999
Q ss_pred EcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee---cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEE
Q 009274 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (538)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (538)
++.|.++++||.++.+....++..... -..+++| ...++++|..|-.|++.|+.+|...+++.||.+.|.+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~~V------YshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEGKV------YSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLA 193 (397)
T ss_pred ccccceEEEeecccceeeEEeecCcee------ehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEE
Confidence 999999999999876544333221111 1123333 2348899999999999999999999999999999999
Q ss_pred EEEeCC---EEEEEecCCcEEEEECCCC-ceeEEEecC-------------CCCceEEEEEEcCCCCEEEEEeCCCcEEE
Q 009274 388 LAVCNG---VLYSGSRDGTIRLWSLSDH-SLLTVLEED-------------SSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (538)
Q Consensus 388 l~~~~~---~l~s~s~dg~i~iwd~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 450 (538)
+.|++. .|++|+.||.|++||++.. .+...+..+ +.+.+.. ++|..++.++++++.|..+++
T Consensus 194 V~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvng-la~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 194 VEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNG-LAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeee-eeecccchhhhhccCccceEE
Confidence 999933 7899999999999999865 333333322 2233333 799999999999999999999
Q ss_pred EeCCcceeeecc-----ccceE-EE--E-EeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-
Q 009274 451 WRNDKFMKSMQT-----HKGSV-FA--V-FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG- 520 (538)
Q Consensus 451 wd~~~~~~~~~~-----h~~~v-~~--~-~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 520 (538)
|+..+...++.. |+..+ .. + +-+...++---.++.+.++++-.+......... ...+.+.++.++
T Consensus 273 wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h-----~k~i~c~~~~~~f 347 (397)
T KOG4283|consen 273 WNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTH-----LKRINCAAYRPDF 347 (397)
T ss_pred eecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecc-----cceeeEEeecCch
Confidence 985432222211 11110 00 1 123444444445577777777666554443322 224455555443
Q ss_pred -EEEEEECCCeEEEEEc
Q 009274 521 -KLFVGCADRTVKVYYY 536 (538)
Q Consensus 521 -~l~sg~~dg~v~vw~~ 536 (538)
..++|+.|+.|..|-.
T Consensus 348 q~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 348 EQCFTGDMNGNIYMWSP 364 (397)
T ss_pred hhhhccccCCccccccc
Confidence 3889999999999853
No 96
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.92 E-value=2.2e-23 Score=194.43 Aligned_cols=285 Identities=18% Similarity=0.254 Sum_probs=199.2
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----ceEEEEe-cCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
..|++|+..|+++++. |..|+|||.|.+|++||+... +..+.+. .....|.++.|++.++.+|+ .+.....+
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLv-vsg~aqak 239 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILV-VSGSAQAK 239 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEE-EecCccee
Confidence 4588999999999998 999999999999999998642 2222222 34567999999997776544 44457788
Q ss_pred EEEccCCCCC------cceeeecccCC-ceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCc-eeEEe-----cCCCCC
Q 009274 319 VWSFSFPLGH------EPLKKWNEEKD-WRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGT-LSCTM-----SGHKSA 384 (538)
Q Consensus 319 vwd~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~-~~~~~-----~~h~~~ 384 (538)
++|-...... ..+......++ .....+.+|+|..+ .+++++.||++++||++..+ ....+ .+..-+
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~ 319 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP 319 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence 8875532211 11211111111 12223446777654 89999999999999997653 22233 233457
Q ss_pred eEEEEEe--CCEEEEEecCCcEEEEECCCCc--eeE-EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceee
Q 009274 385 VSTLAVC--NGVLYSGSRDGTIRLWSLSDHS--LLT-VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKS 459 (538)
Q Consensus 385 v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 459 (538)
+++.+|+ +..+++|+.||.|.+|+..... +.. .-..|..+.-.+++.|+++|++|++-+.|+++++||+++..+.
T Consensus 320 ~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred ceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 8899999 5589999999999999986543 223 3334545555666899999999999999999999998764443
Q ss_pred e---cc----ccceEEEEEeCCCEEEEEeC------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEE
Q 009274 460 M---QT----HKGSVFAVFLEGKWLFTGGW------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVG 525 (538)
Q Consensus 460 ~---~~----h~~~v~~~~~~~~~l~sgs~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg 525 (538)
+ .+ ....=.|++|+.++|++|+. .|++.+||..+.......... ..+++.+.+.+ =+++++|
T Consensus 400 L~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~----~aSvv~~~WhpkLNQi~~g 475 (641)
T KOG0772|consen 400 LNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS----TASVVRCLWHPKLNQIFAG 475 (641)
T ss_pred hhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC----CceEEEEeecchhhheeee
Confidence 3 22 22233456679999999873 478999999887765544432 44566666666 5679999
Q ss_pred ECCCeEEEEE
Q 009274 526 CADRTVKVYY 535 (538)
Q Consensus 526 ~~dg~v~vw~ 535 (538)
+.||.++++-
T Consensus 476 sgdG~~~vyY 485 (641)
T KOG0772|consen 476 SGDGTAHVYY 485 (641)
T ss_pred cCCCceEEEE
Confidence 9999999873
No 97
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.92 E-value=9.4e-24 Score=196.19 Aligned_cols=274 Identities=18% Similarity=0.322 Sum_probs=211.1
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC---CceEEEEec--CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD---FSHVHTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~---~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
.|.+-|.++.++ .++++||+ .|.|+|||+.. ..++..+.. ....|.++..+|++. .|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgr-tLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGR-TLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCc-eEEeccccceeeeeec
Confidence 588888899998 78899987 67899999853 223333332 456788888888665 5577888999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR 400 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~ 400 (538)
..+........-.. ...+..++++||.+..++++.||.|.|||+.+...++.|++|.+.+.||.++ +..|-+|+-
T Consensus 495 AapTprikaeltss---apaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGl 571 (705)
T KOG0639|consen 495 AAPTPRIKAELTSS---APACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGL 571 (705)
T ss_pred cCCCcchhhhcCCc---chhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCC
Confidence 87643222111110 0122345788999999999999999999999999999999999999999999 559999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe--CCCEE
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWL 477 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l 477 (538)
|+++|.||+++++.+...... ..+. .+..+|++.++++|-.++.+.+....+ ....+..|.+.|.++.| .|+++
T Consensus 572 DntvRcWDlregrqlqqhdF~--SQIf-SLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 572 DNTVRCWDLREGRQLQQHDFS--SQIF-SLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWF 648 (705)
T ss_pred ccceeehhhhhhhhhhhhhhh--hhhe-ecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCcee
Confidence 999999999998876554432 2233 368899999999999999999988554 55677889999999988 89999
Q ss_pred EEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEE-EEEeCCEEEEEECCCeEEEEEc
Q 009274 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITA-LLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
++.+.|+.+..|...-+........ ..++.+| +.++|.++++|+.|..-.||.+
T Consensus 649 vStGkDnlLnawrtPyGasiFqskE-----~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 649 VSTGKDNLLNAWRTPYGASIFQSKE-----SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eecCchhhhhhccCccccceeeccc-----cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9999999999999877765444332 2233443 3334566888999998888875
No 98
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.6e-21 Score=163.78 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=200.2
Q ss_pred cceeeeeccCcceeEEeecCCeEEEE------------------------EeecCCCcEEEEEEc--CCEEEEEeCCCcE
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFK------------------------DLQGHRDCVTGLAVG--GGFLFSSSFDKSI 274 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~------------------------~l~~h~~~V~~l~~~--~~~l~s~s~dg~i 274 (538)
.+..+.+.+.+..++.++.....++- .-+.|.+.|.|.+|+ |+++++|+.|.+|
T Consensus 34 airav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~i 113 (350)
T KOG0641|consen 34 AIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTI 113 (350)
T ss_pred heeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCceE
Confidence 35556666666666666554444433 335689999999999 9999999999999
Q ss_pred EEEeCCCCce-----EEEEecCCcCeEEEEEecC---CCCEEEEEc-CCCcEEEEEccCCCCCcceeeecccCCceeeeE
Q 009274 275 HVWSLKDFSH-----VHTFKGHDHKVMAVVYVDE---DQPLCISGD-SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI 345 (538)
Q Consensus 275 ~iwd~~~~~~-----~~~~~~h~~~v~~l~~~~~---~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (538)
++...+...+ -..+.-|.+.|..++|..+ ++.++++++ .|..|++-|..++.....+. .+.. +. .
T Consensus 114 k~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s---ghtg-hi--l 187 (350)
T KOG0641|consen 114 KVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS---GHTG-HI--L 187 (350)
T ss_pred EEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec---CCcc-cE--E
Confidence 9976643222 2456789999999999743 455777765 47788888877665444433 3332 11 2
Q ss_pred EEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC--C-----CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeE
Q 009274 346 HALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--H-----KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLT 416 (538)
Q Consensus 346 ~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--h-----~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 416 (538)
.-.++++-.+++|+.|.+|++||++-..++.++.. | .+.|.+++.. +.+|++|-.|....+||++.++.++
T Consensus 188 alyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq 267 (350)
T KOG0641|consen 188 ALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQ 267 (350)
T ss_pred EEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceee
Confidence 24577899999999999999999998888887632 2 3578888887 6799999999999999999999999
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEE
Q 009274 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSV 488 (538)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~i 488 (538)
.+..|.. .+.+ +.|+|...++++++.|..|++-|+.. ++.....|...+..+.| ..-.+++.+.|.++.+
T Consensus 268 ~f~phsa-dir~-vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tl 345 (350)
T KOG0641|consen 268 RFHPHSA-DIRC-VRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATL 345 (350)
T ss_pred eeCCCcc-ceeE-EEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEE
Confidence 9987643 3343 69999999999999999999999542 34445668888888877 5667899999999999
Q ss_pred EecC
Q 009274 489 QELA 492 (538)
Q Consensus 489 wd~~ 492 (538)
|-+.
T Consensus 346 wa~~ 349 (350)
T KOG0641|consen 346 WALN 349 (350)
T ss_pred eccC
Confidence 9764
No 99
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=1.7e-22 Score=187.71 Aligned_cols=238 Identities=16% Similarity=0.278 Sum_probs=185.9
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
+....+.|.+++|. |+++++|...|.|+|+|..+...+..+.+|+.+|..+.|+|.++.++++|+.|+.+++||+.+.
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a 143 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA 143 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence 44567899999997 9999999999999999988777888999999999999999999999999999999999999876
Q ss_pred CCCcceeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe-C-CEEEEEecC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC-N-GVLYSGSRD 401 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~-~-~~l~s~s~d 401 (538)
.. ......+.+ +..+.+++|. +..+++|+.||.|++||+++. ..+.++. |..+|..+.+- + ..+++++ .
T Consensus 144 ~v---~~~l~~htD--YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-G 216 (487)
T KOG0310|consen 144 YV---QAELSGHTD--YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAG-G 216 (487)
T ss_pred EE---EEEecCCcc--eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcC-C
Confidence 52 223333333 3334456664 449999999999999999987 5666665 99999999988 3 4666665 5
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEE--eCCCEE
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVF--LEGKWL 477 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~--~~~~~l 477 (538)
..+++||+-+|.........|...+ +++.+..++..|++|+-|+.+++||+.+ .+..+. ..++|.+++ ++++.+
T Consensus 217 n~vkVWDl~~G~qll~~~~~H~KtV-TcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~ 294 (487)
T KOG0310|consen 217 NSVKVWDLTTGGQLLTSMFNHNKTV-TCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTV 294 (487)
T ss_pred CeEEEEEecCCceehhhhhcccceE-EEEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceE
Confidence 6899999996655444333233333 4478888999999999999999999654 333333 457887765 488999
Q ss_pred EEEeCCCeEEEEecCCC
Q 009274 478 FTGGWDKTVSVQELAGD 494 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~ 494 (538)
+.|..||.+.+=+...+
T Consensus 295 viGmsnGlv~~rr~~~k 311 (487)
T KOG0310|consen 295 VIGMSNGLVSIRRREVK 311 (487)
T ss_pred EEecccceeeeehhhcc
Confidence 99999999887755433
No 100
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.91 E-value=2.1e-22 Score=184.31 Aligned_cols=273 Identities=20% Similarity=0.309 Sum_probs=210.6
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..|+++... .+.++||+.|..+.++|..+.+.+.+++||...|+.+.++++ ...+++++.|..|++|..........
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~-~~~v~~aSad~~i~vws~~~~s~~~~ 298 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKD-LDTVITASADEIIRVWSVPLSSEPTS 298 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccc-hhheeecCCcceEEeeccccccCccc
Confidence 456777776 489999999999999999999999999999999999999984 55779999999999999876554433
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEe-CC-EEEEEecCCcEEE
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVC-NG-VLYSGSRDGTIRL 406 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~-~~-~l~s~s~dg~i~i 406 (538)
....... ......++.|.||++++.||+..+.|++++..+..... ..-.+++.+|+ ++ .+.+|..|+.+++
T Consensus 299 ~~~h~~~-----V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 299 SRPHEEP-----VTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred ccccccc-----ceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 3332221 12347788999999999999999999999998776643 23458999999 44 7788999999999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce--eeecc-ccceEEEEEe--CCCEEEEEe
Q 009274 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM--KSMQT-HKGSVFAVFL--EGKWLFTGG 481 (538)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-h~~~v~~~~~--~~~~l~sgs 481 (538)
||+.++..+..|.+| .+.+.. +.|+.||-+|++++.|+.|++||+++.. +++.. ....+.+++| .|.+|+.++
T Consensus 374 wdlks~~~~a~Fpgh-t~~vk~-i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g 451 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGH-TGPVKA-ISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG 451 (506)
T ss_pred EEcCCccccccCCCC-CCceeE-EEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec
Confidence 999999999999885 566665 6999999999999999999999988743 33332 2236777877 789999998
Q ss_pred CCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEEc
Q 009274 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 482 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~~ 536 (538)
.|=.|++++-.+.......... .+....+.+.+. ...+++++.|..++++.+
T Consensus 452 ~~l~Vy~~~k~~k~W~~~~~~~---~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 452 SDLQVYICKKKTKSWTEIKELA---DHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ceeEEEEEecccccceeeehhh---hcccccceeeecccceEEeeccchhheEEeec
Confidence 8877777775554432221111 133355666665 334778999999998865
No 101
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=3.1e-23 Score=176.10 Aligned_cols=239 Identities=18% Similarity=0.209 Sum_probs=175.7
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC---ceEEEEecCCcCeEEEEEec-CCCCEEEEEcCCCcEEEEE
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVD-EDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd 321 (538)
..+|++.|..+..+ |++|+|++.|++|+|+.+.+. +.+.++.+|.++|..++|.. .-
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~----------------- 69 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKF----------------- 69 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeeccccc-----------------
Confidence 45799999887766 999999999999999998653 56889999999999999953 22
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC----CEE
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN----GVL 395 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~----~~l 395 (538)
|.+|++++.||.|.||.-.+++ .......|...|++++|.+ -.|
T Consensus 70 ------------------------------G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~L 119 (299)
T KOG1332|consen 70 ------------------------------GTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLL 119 (299)
T ss_pred ------------------------------CcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEE
Confidence 5567777777777777766553 3445678999999999982 389
Q ss_pred EEEecCCcEEEEECCCC--ceeEEEecCCCCceEEEEEEcCC---C-----------CEEEEEeCCCcEEEEeCCc----
Q 009274 396 YSGSRDGTIRLWSLSDH--SLLTVLEEDSSGAVSSVLSLTAV---Q-----------HTLVVSHESGSIKVWRNDK---- 455 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~l~~~~~dg~i~iwd~~~---- 455 (538)
++++.||.|.+.+.++. -....+...|.-.+.+ +++.|- | +.|++|+.|+.|+||+...
T Consensus 120 acasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gvns-Vswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~ 198 (299)
T KOG1332|consen 120 ACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNS-VSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWK 198 (299)
T ss_pred EEeeCCCcEEEEEEcCCCCccchhhhhccccccce-eeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchh
Confidence 99999999999998764 2223333333333444 466654 3 5699999999999998543
Q ss_pred ceeeeccccceEEEEEe------CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe--CCEEEEEEC
Q 009274 456 FMKSMQTHKGSVFAVFL------EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCA 527 (538)
Q Consensus 456 ~~~~~~~h~~~v~~~~~------~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~ 527 (538)
..+++.+|.+.|+.+++ -..+|+++|.||+|.||................+ ..++..+.|+ ++.|++++.
T Consensus 199 ~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f--~~~~w~vSWS~sGn~LaVs~G 276 (299)
T KOG1332|consen 199 LERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEF--PDVVWRVSWSLSGNILAVSGG 276 (299)
T ss_pred hhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccC--CcceEEEEEeccccEEEEecC
Confidence 45568999999998876 3458999999999999988743222222222222 2244444444 566788999
Q ss_pred CCeEEEEEc
Q 009274 528 DRTVKVYYY 536 (538)
Q Consensus 528 dg~v~vw~~ 536 (538)
|+.|.+|+=
T Consensus 277 dNkvtlwke 285 (299)
T KOG1332|consen 277 DNKVTLWKE 285 (299)
T ss_pred CcEEEEEEe
Confidence 999999974
No 102
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=8.9e-23 Score=179.46 Aligned_cols=242 Identities=19% Similarity=0.322 Sum_probs=193.8
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC------C----------------------------------
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK------D---------------------------------- 281 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~------~---------------------------------- 281 (538)
++.++.||.+.|+|+.|+ +.++++++.|++..||... .
T Consensus 182 CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~ti 261 (481)
T KOG0300|consen 182 CLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTI 261 (481)
T ss_pred ceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCcee
Confidence 445578999999999999 8999999999999999621 0
Q ss_pred CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC
Q 009274 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD 361 (538)
Q Consensus 282 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 361 (538)
..++..+.+|...|.+..|.. ++..+++++.|.+..+||++++.....+....... .-++-+|..+++++.+.|
T Consensus 262 RvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~EL-----tHcstHptQrLVvTsSrD 335 (481)
T KOG0300|consen 262 RVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSEL-----THCSTHPTQRLVVTSSRD 335 (481)
T ss_pred eeeeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhc-----cccccCCcceEEEEeccC
Confidence 123566789999999999987 55567999999999999999887666655443322 234667778899999999
Q ss_pred CcEEEEECCCC-ceeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCE
Q 009274 362 RTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 362 g~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
.+.++||++.. ..+..|.||...|+++.|. +..+++|+.|.+|++||+++.. ++.++..... +. .++++..+..
T Consensus 336 tTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~--~N-Rvavs~g~~i 412 (481)
T KOG0300|consen 336 TTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSP--AN-RVAVSKGHPI 412 (481)
T ss_pred ceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeecCCc--cc-eeEeecCCce
Confidence 99999999843 4567889999999999999 8899999999999999999865 5677765433 22 2577777888
Q ss_pred EEEEeCCCcEEEEeCCc------ceeeeccccceEEEEEe-CC---CEEEEEeCCCeEEEEecCCC
Q 009274 439 LVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL-EG---KWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~~------~~~~~~~h~~~v~~~~~-~~---~~l~sgs~dg~v~iwd~~~~ 494 (538)
|+.-..+..|++||+.. +...-++|...|.|++| +. .-|++++.|..+.-|++...
T Consensus 413 IAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 413 IAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred EEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 99999999999999542 33355789999999998 22 35889999999999998754
No 103
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=2.6e-22 Score=185.21 Aligned_cols=231 Identities=23% Similarity=0.396 Sum_probs=179.4
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
+|.+.|.+++.+ +++|++|+.|..|.||+.++.+.++.+++|.+.|.+++|-. +..-+++++.|+++++|+++...
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s- 277 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLS- 277 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhH-
Confidence 799999999998 99999999999999999999999999999999999999965 56667999999999999997543
Q ss_pred CcceeeecccCCceeeeEEEEee--cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEecCCcE
Q 009274 328 HEPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTI 404 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i 404 (538)
.+..+..|+. .+..++. -++.+-+|+.|+++++|++. .+....+.+|.+.+-|++|- +..+++||.||.|
T Consensus 278 --~vetlyGHqd----~v~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~I 350 (479)
T KOG0299|consen 278 --YVETLYGHQD----GVLGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSI 350 (479)
T ss_pred --HHHHHhCCcc----ceeeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceE
Confidence 3333344433 2334433 24566677799999999994 34445678899999999998 7799999999999
Q ss_pred EEEECCCCceeEEEecCCC---C-------ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc------eeeeccccceEE
Q 009274 405 RLWSLSDHSLLTVLEEDSS---G-------AVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF------MKSMQTHKGSVF 468 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~h~~~v~ 468 (538)
.+|++...+++.+....|. . ...+.++..|..+++++|+.+|.|++|.+..- +..+. -.+.|+
T Consensus 351 aLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVN 429 (479)
T KOG0299|consen 351 ALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVN 429 (479)
T ss_pred EEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEE
Confidence 9999999999887765432 1 03344678899999999999999999985542 33333 567888
Q ss_pred EEEe--CCCEEEEE-eCCCeEEEEe
Q 009274 469 AVFL--EGKWLFTG-GWDKTVSVQE 490 (538)
Q Consensus 469 ~~~~--~~~~l~sg-s~dg~v~iwd 490 (538)
+++| +|+.+++| +....+-=|-
T Consensus 430 sl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 430 SLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred EEEEccCCCEEEEecccccccceee
Confidence 8887 78855554 4444444443
No 104
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.91 E-value=5e-23 Score=180.55 Aligned_cols=269 Identities=17% Similarity=0.202 Sum_probs=203.2
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------------------------eecCCCcEEEEEEc--CCEEEEEeC
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------------------------LQGHRDCVTGLAVG--GGFLFSSSF 270 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------------------------l~~h~~~V~~l~~~--~~~l~s~s~ 270 (538)
.+...+.+++++..+++|+.+..+++.+ |-.|.++|+++.|+ ...|++|+.
T Consensus 113 ~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~sr 192 (430)
T KOG0640|consen 113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSR 192 (430)
T ss_pred cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccC
Confidence 4466788888888898988888777665 34588999999999 889999999
Q ss_pred CCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEE
Q 009274 271 DKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL 348 (538)
Q Consensus 271 dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (538)
|++|+++|+......+.++ ....+|.++.|+|.++ +++.|..-.++++||+++.++-........+. .....+..
T Consensus 193 D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGe-fllvgTdHp~~rlYdv~T~QcfvsanPd~qht--~ai~~V~Y 269 (430)
T KOG0640|consen 193 DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGE-FLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT--GAITQVRY 269 (430)
T ss_pred CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCc-eEEEecCCCceeEEeccceeEeeecCcccccc--cceeEEEe
Confidence 9999999987543332222 2457899999999555 77889999999999998765432222111111 12223456
Q ss_pred eecCCEEEEeeCCCcEEEEECCCCceeEEe-cCCC-CCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCC-
Q 009274 349 TTSGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGHK-SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS- 423 (538)
Q Consensus 349 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~h~-~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~- 423 (538)
++.+++.++|+.||.|++||--+++++.++ +.|. ..|.+..|. ++++++.+.|..+++|.+.+++.+..+.+...
T Consensus 270 s~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~t 349 (430)
T KOG0640|consen 270 SSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTT 349 (430)
T ss_pred cCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcc
Confidence 677889999999999999999999999988 4565 468888888 56999999999999999999999998876421
Q ss_pred --CceEEEEEEcCCCCEEEEEeC-CCcEEEEeCCcc---eeeeccccceEEEEE--eCCCEEEEEeCCCeEEEEec
Q 009274 424 --GAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDKF---MKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 424 --~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~---~~~~~~h~~~v~~~~--~~~~~l~sgs~dg~v~iwd~ 491 (538)
.....-..|+....+++.-.+ .+.+.-||.++. ...-.+|.+.+..+. |.+.-+++++.|-.+|+|--
T Consensus 350 grq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 350 GRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred cchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 111122356666677666543 578999996642 223357999999884 58899999999999999964
No 105
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.91 E-value=9.7e-23 Score=188.03 Aligned_cols=241 Identities=17% Similarity=0.280 Sum_probs=180.5
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee-------eecccCCceeeeEEEEeecCC-EEEEeeCC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK-------KWNEEKDWRYSGIHALTTSGR-YLYTGSGD 361 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~l~sg~~d 361 (538)
.|.+.|+.+.+.|++..++++.+..+.+.|||........... .+..+... ...+++++... .+++|+.|
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~e--g~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKE--GYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccc--ccccccccccceeEeeccCC
Confidence 4999999999999999999999999999999987543332211 22222221 11235555433 89999999
Q ss_pred CcEEEEECCCCc-------eeEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCC--CceeEEEecCCCCceEEE
Q 009274 362 RTIKAWSLLDGT-------LSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD--HSLLTVLEEDSSGAVSSV 429 (538)
Q Consensus 362 g~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~ 429 (538)
++|.+||+.... +...+.+|...|..++|+ .+++++++.|+.+.|||+|+ .++......| .+.+.+
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah-~~~vn~- 277 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAH-SAEVNC- 277 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccccc-CCceeE-
Confidence 999999997532 345678999999999999 56999999999999999995 4444444444 455555
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCee------
Q 009274 430 LSLTA-VQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEF------ 496 (538)
Q Consensus 430 ~~~~~-~~~~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~------ 496 (538)
++|+| ++..||+|+.|++|.+||+++ ++.++.+|...|.++.| ....|++++.|+.+.+||+..-..
T Consensus 278 ~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ed 357 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPED 357 (422)
T ss_pred EEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhh
Confidence 68877 567888999999999999664 67788999999999987 678999999999999999964221
Q ss_pred ------EeeeecCCcccCCCceEEEEEeCC---EEEEEECCCeEEEEEcC
Q 009274 497 ------EEDVIPTGAIPCGSVITALLYWQG---KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 497 ------~~~~~~~~~~~~~~~~~~~~~~~~---~l~sg~~dg~v~vw~~~ 537 (538)
...+.|.+ |...+..+.|... .+++.+.|+.++||++.
T Consensus 358 a~dgppEllF~HgG---H~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 358 AEDGPPELLFIHGG---HTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred hccCCcceeEEecC---cccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 12233333 3444555555533 37789999999999975
No 106
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=4.4e-22 Score=183.64 Aligned_cols=293 Identities=11% Similarity=0.211 Sum_probs=225.0
Q ss_pred cCCeEEEEEee----c--CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC--CceEEEEecCCcCeEEEEEecCCCCEE
Q 009274 239 SKGNVKFKDLQ----G--HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD--FSHVHTFKGHDHKVMAVVYVDEDQPLC 308 (538)
Q Consensus 239 ~~~~~~i~~l~----~--h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l 308 (538)
+.+.+.+..++ + -.+.|+++.|+ ...+++|+.||+++||.++. ...++.+.-...+|.+..|.|++...+
T Consensus 194 p~~tl~~krlkDaNa~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i 273 (514)
T KOG2055|consen 194 PPGTLNIKRLKDANAAHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVI 273 (514)
T ss_pred CCceeeeEeecccccCCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEE
Confidence 44555555443 2 24789999999 78999999999999998853 345666666778999999999888788
Q ss_pred EEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEE
Q 009274 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTL 388 (538)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 388 (538)
++++....++.||+.+.+..+.-. ..... .....-..+++++++|+..+..|.|.+....+++.+.+++ -.+.|..+
T Consensus 274 ~~s~rrky~ysyDle~ak~~k~~~-~~g~e-~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~ 350 (514)
T KOG2055|consen 274 FTSGRRKYLYSYDLETAKVTKLKP-PYGVE-EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDF 350 (514)
T ss_pred EecccceEEEEeeccccccccccC-CCCcc-cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeE
Confidence 999999999999998765433222 22221 1222345788999999999999999999999999999887 57889999
Q ss_pred EEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--------ccee
Q 009274 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMK 458 (538)
Q Consensus 389 ~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--------~~~~ 458 (538)
+|+ +..|++++.+|.|.+||++...+++++.... +.....++.++++.++|+|+..|.|.|||.. +++.
T Consensus 351 ~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G-~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik 429 (514)
T KOG2055|consen 351 TFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDG-SVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIK 429 (514)
T ss_pred EEecCCcEEEEEcCCceEEEEecCCcceEEEEeecC-ccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchh
Confidence 998 5588888899999999999999999987653 3334447899999999999999999999843 4566
Q ss_pred eeccccceEEEEEe--CCCEEEEEeC--CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEEEECCCeEE
Q 009274 459 SMQTHKGSVFAVFL--EGKWLFTGGW--DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFVGCADRTVK 532 (538)
Q Consensus 459 ~~~~h~~~v~~~~~--~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sg~~dg~v~ 532 (538)
.+..-...|.++.| |.+.|+.+|. +..+|+-.+.+........... .+.+ .++++.+ | .|.|+.|..+|.|.
T Consensus 430 ~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n-~~vg-~vtc~aFSP~sG~lAvGNe~grv~ 507 (514)
T KOG2055|consen 430 TVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSN-TKVG-HVTCMAFSPNSGYLAVGNEAGRVH 507 (514)
T ss_pred hhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCC-Cccc-ceEEEEecCCCceEEeecCCCcee
Confidence 66667778888888 7888877774 5789998887766544333321 1122 3455544 5 67788999999999
Q ss_pred EEEcC
Q 009274 533 VYYYG 537 (538)
Q Consensus 533 vw~~~ 537 (538)
+|++.
T Consensus 508 l~kL~ 512 (514)
T KOG2055|consen 508 LFKLH 512 (514)
T ss_pred eEeec
Confidence 99974
No 107
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.91 E-value=7e-22 Score=170.05 Aligned_cols=227 Identities=17% Similarity=0.221 Sum_probs=173.6
Q ss_pred ceeeeeccCcceeEEeecCCe---------EEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 009274 222 IDQARAAGGVKDLVNGLSKGN---------VKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~---------~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 290 (538)
+.++....++..+.+...+.. .++-++.||+++|+|++.+ .++++||+.|.++++||+++|+++..++
T Consensus 13 lTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k- 91 (327)
T KOG0643|consen 13 LTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK- 91 (327)
T ss_pred cceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee-
Confidence 555556566666665555444 4455689999999999998 8999999999999999999999999988
Q ss_pred CCcCeEEEEEecCCCCEEEEEc----CCCcEEEEEccCCC----CCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC
Q 009274 291 HDHKVMAVVYVDEDQPLCISGD----SGGGIFVWSFSFPL----GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~----~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 362 (538)
...+|..+.|+.++...+++.. ..+.|.++|++... ...++.....+. ......-|.+-+++|++|..||
T Consensus 92 ~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~--skit~a~Wg~l~~~ii~Ghe~G 169 (327)
T KOG0643|consen 92 TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD--SKITSALWGPLGETIIAGHEDG 169 (327)
T ss_pred cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc--cceeeeeecccCCEEEEecCCC
Confidence 5578999999997766555543 45789999998543 222232222222 2233456788899999999999
Q ss_pred cEEEEECCCCc-eeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecC------------------
Q 009274 363 TIKAWSLLDGT-LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEED------------------ 421 (538)
Q Consensus 363 ~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------------------ 421 (538)
.|..||+++++ .+..-..|...|+.+.++ ..+++++|.|.+-++||.++.+.++++...
T Consensus 170 ~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~Vilg 249 (327)
T KOG0643|consen 170 SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILG 249 (327)
T ss_pred cEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEec
Confidence 99999999985 455667899999999999 449999999999999999887666554321
Q ss_pred ------------------------------------CCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 422 ------------------------------------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 422 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
|-+++.+ ++++|+|+..++|++||.|++.-
T Consensus 250 GGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINs-vAfhPdGksYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 250 GGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINS-VAFHPDGKSYSSGGEDGYVRLHH 315 (327)
T ss_pred CCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcce-eEECCCCcccccCCCCceEEEEE
Confidence 1233333 69999999999999999999874
No 108
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.91 E-value=2.5e-22 Score=192.12 Aligned_cols=263 Identities=18% Similarity=0.254 Sum_probs=193.0
Q ss_pred ceeEEeecCCeEEEEE---------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEE--EecCC
Q 009274 232 KDLVNGLSKGNVKFKD---------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT--FKGHD 292 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~---------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~h~ 292 (538)
..++.+..+|.+.+++ ...|..+|..+.|- ...|++++.|.++++||+++.++... +.+|.
T Consensus 65 HiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~ 144 (720)
T KOG0321|consen 65 HILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHT 144 (720)
T ss_pred ceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccc
Confidence 4455555566555543 45799999999998 67899999999999999999988876 88999
Q ss_pred cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC--------------------c----ceeeecccCCceeeeEE-E
Q 009274 293 HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH--------------------E----PLKKWNEEKDWRYSGIH-A 347 (538)
Q Consensus 293 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------------------~----~~~~~~~~~~~~~~~~~-~ 347 (538)
..|.+++|.+.+...|++|+.||.|.|||++-.... . .+..+..+.......+. -
T Consensus 145 ~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv 224 (720)
T KOG0321|consen 145 GSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVV 224 (720)
T ss_pred cccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEE
Confidence 999999999999999999999999999998743200 0 01111111111111122 3
Q ss_pred EeecCCEEEEeeC-CCcEEEEECCCCceeEE--------ecCC---CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc
Q 009274 348 LTTSGRYLYTGSG-DRTIKAWSLLDGTLSCT--------MSGH---KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS 413 (538)
Q Consensus 348 ~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~--------~~~h---~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~ 413 (538)
+..|...|++++. |+.|++||++....... +..| .-.+.++..+ +.+|++.+.|++|++||+.+..
T Consensus 225 ~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s 304 (720)
T KOG0321|consen 225 LFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLS 304 (720)
T ss_pred EEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccC
Confidence 3457778999888 99999999987543322 2223 2245566665 6788888889999999998754
Q ss_pred --eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe---CCCEEEEEeCCCe
Q 009274 414 --LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKT 485 (538)
Q Consensus 414 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~ 485 (538)
++..+.++........-..+|++.++++|+.|...++|.+.+ ....+.+|...|+++.| .-.-+++++.|.+
T Consensus 305 ~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~ 384 (720)
T KOG0321|consen 305 ISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFR 384 (720)
T ss_pred cCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcc
Confidence 344454443333333357899999999999999999998665 45567899999999988 4445777799999
Q ss_pred EEEEecCCC
Q 009274 486 VSVQELAGD 494 (538)
Q Consensus 486 v~iwd~~~~ 494 (538)
+++|++..+
T Consensus 385 ~kiW~l~~~ 393 (720)
T KOG0321|consen 385 VKIWRLSNG 393 (720)
T ss_pred eEEEeccCc
Confidence 999999654
No 109
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=9.4e-22 Score=190.19 Aligned_cols=305 Identities=20% Similarity=0.285 Sum_probs=217.3
Q ss_pred ccCcceeEEeecCCeEEEEEee----------cC--------------C-----C----cEEEEEEc--CCEEEEEeCCC
Q 009274 228 AGGVKDLVNGLSKGNVKFKDLQ----------GH--------------R-----D----CVTGLAVG--GGFLFSSSFDK 272 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~l~----------~h--------------~-----~----~V~~l~~~--~~~l~s~s~dg 272 (538)
......++.+..+|.+++++-. .| . . ..-++.|+ .+.+.....|.
T Consensus 267 cVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndh 346 (1080)
T KOG1408|consen 267 CVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDH 346 (1080)
T ss_pred eeecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCc
Confidence 3456778888899999887621 11 0 0 11244566 78899999999
Q ss_pred cEEEEeCCCCceE---EEEecCCcCeEEEEEecCC----------CCEEEEEcCCCcEEEEEccCCCCCcceee------
Q 009274 273 SIHVWSLKDFSHV---HTFKGHDHKVMAVVYVDED----------QPLCISGDSGGGIFVWSFSFPLGHEPLKK------ 333 (538)
Q Consensus 273 ~i~iwd~~~~~~~---~~~~~h~~~v~~l~~~~~~----------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------ 333 (538)
.++|||+.+-+.+ ..+-.|...|+++.-.|.+ ...|++++.|++|++||+...........
T Consensus 347 SlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~ 426 (1080)
T KOG1408|consen 347 SLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSAN 426 (1080)
T ss_pred eEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhh
Confidence 9999999764432 3344588888888766511 23589999999999999986322111100
Q ss_pred ----ecc----------------------cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEE
Q 009274 334 ----WNE----------------------EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (538)
Q Consensus 334 ----~~~----------------------~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (538)
... -....-....+++|++++|++|..-|++++||+.+.+....+..|...|.|
T Consensus 427 l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilc 506 (1080)
T KOG1408|consen 427 LSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILC 506 (1080)
T ss_pred hhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEE
Confidence 000 000112235689999999999999999999999999888899999999999
Q ss_pred EEEe-----CCEEEEEecCCcEEEEECCCC-ceeEEEecCCC--------------------------------------
Q 009274 388 LAVC-----NGVLYSGSRDGTIRLWSLSDH-SLLTVLEEDSS-------------------------------------- 423 (538)
Q Consensus 388 l~~~-----~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~-------------------------------------- 423 (538)
+.|+ .++|++++.|+.|+++|+... .+++++..|..
T Consensus 507 LeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~ 586 (1080)
T KOG1408|consen 507 LEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRL 586 (1080)
T ss_pred EeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCcee
Confidence 9999 348999999999999998632 11221111100
Q ss_pred ---------CceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccceeeecc---ccceEEEE--EeCCCEEEEEeCCCeEE
Q 009274 424 ---------GAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQT---HKGSVFAV--FLEGKWLFTGGWDKTVS 487 (538)
Q Consensus 424 ---------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~---h~~~v~~~--~~~~~~l~sgs~dg~v~ 487 (538)
.....-+...|+.+++++++.|+.|+|||+ ++..+.+++ |.+....+ .|.|.|+++...|.++.
T Consensus 587 f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~ 666 (1080)
T KOG1408|consen 587 FPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLC 666 (1080)
T ss_pred ccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceE
Confidence 001112567788899999999999999995 456667765 55555544 56899999999999999
Q ss_pred EEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEEEECCCeEEEEEcC
Q 009274 488 VQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 488 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~~dg~v~vw~~~ 537 (538)
++|..++++...... |+..++.+.|.++ +|++.+.||.|.||++.
T Consensus 667 ~~Df~sgEcvA~m~G-----HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 667 FVDFVSGECVAQMTG-----HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred EEEeccchhhhhhcC-----cchheeeeeecccchhheeecCCceEEEEECc
Confidence 999999988665543 4446666655533 49999999999999974
No 110
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3.7e-21 Score=169.18 Aligned_cols=257 Identities=16% Similarity=0.211 Sum_probs=198.9
Q ss_pred CCCCccceeeeeccCcceeEEeecCCeEEEEEee--------cCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ--------GHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~--------~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
+++...|..+.+++....++.++.+|.+++++.. .|..++.+++|. ...+++|+.||.|+.+|+++++...
T Consensus 10 npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 10 NPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred CCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCccee
Confidence 4445568889999999999999999999999854 489999999999 8899999999999999999876654
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
+..|..+|.++.+++ ....+++|+.|++|++||.+........ ... ..+.+++..++.|++|+.|..+.+
T Consensus 90 -igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~---d~~-----kkVy~~~v~g~~LvVg~~~r~v~i 159 (323)
T KOG1036|consen 90 -IGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTF---DQG-----KKVYCMDVSGNRLVVGTSDRKVLI 159 (323)
T ss_pred -eccCCCceEEEEeec-cCCeEEEcccCccEEEEecccccccccc---ccC-----ceEEEEeccCCEEEEeecCceEEE
Confidence 456999999999987 4557799999999999998853222211 111 147788889999999999999999
Q ss_pred EECCCCceeEEe--cCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCC----ceeEEEecCCC-------CceEEEEE
Q 009274 367 WSLLDGTLSCTM--SGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDH----SLLTVLEEDSS-------GAVSSVLS 431 (538)
Q Consensus 367 wd~~~~~~~~~~--~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~----~~~~~~~~~~~-------~~~~~~~~ 431 (538)
||+++....... ..-+-.+.|+++.+ .=.++++-||.|.+=.+... +....++.|.. ......++
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE
Confidence 999987654422 22345688888873 46788889999988766655 33344444421 11233479
Q ss_pred EcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeC
Q 009274 432 LTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGW 482 (538)
Q Consensus 432 ~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~ 482 (538)
|+|-...|++|+.||.|.+||. ++.+..+......|.+++| +|..||.++.
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred eccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 9999999999999999999995 4556666666677888888 8999999874
No 111
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=1.3e-22 Score=172.36 Aligned_cols=222 Identities=24% Similarity=0.329 Sum_probs=162.3
Q ss_pred ccCcceeEEeecCCeEEE------------EEeecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCce--EEEEe
Q 009274 228 AGGVKDLVNGLSKGNVKF------------KDLQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSH--VHTFK 289 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i------------~~l~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~--~~~~~ 289 (538)
.-.+.++++.++++.+++ .+|.||.+||+.++|. |.+||++++||.|.||.-++++- .....
T Consensus 20 DyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~ 99 (299)
T KOG1332|consen 20 DYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHA 99 (299)
T ss_pred hhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhh
Confidence 344555666666555554 4588999999999997 99999999999999999887743 44566
Q ss_pred cCCcCeEEEEEecCC-CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec---C-----------CE
Q 009274 290 GHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---G-----------RY 354 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~ 354 (538)
.|...|++++|.|.+ +.+|++++.||.|.+.+++....-...+....|. .-.. ..++.|. | +.
T Consensus 100 ~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~-~Gvn-sVswapa~~~g~~~~~~~~~~~kr 177 (299)
T KOG1332|consen 100 AHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHE-IGVN-SVSWAPASAPGSLVDQGPAAKVKR 177 (299)
T ss_pred hhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccc-cccc-eeeecCcCCCccccccCcccccce
Confidence 899999999999864 4567889999999999998662222222212211 1111 1233332 2 47
Q ss_pred EEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC------CEEEEEecCCcEEEEECCCCce--eEEEecCCCC
Q 009274 355 LYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN------GVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSG 424 (538)
Q Consensus 355 l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~------~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~ 424 (538)
|++|+.|..|+||+..+++ ...++.+|.+.|+.++|.+ .++++|+.||++.||..+.... ..++....+.
T Consensus 178 lvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~ 257 (299)
T KOG1332|consen 178 LVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPD 257 (299)
T ss_pred eeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCc
Confidence 9999999999999998763 4456899999999999983 2899999999999998763211 2222222233
Q ss_pred ceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 425 AVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 425 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
.... ++|+..|+.|++++.|+.+.+|.
T Consensus 258 ~~w~-vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 258 VVWR-VSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred ceEE-EEEeccccEEEEecCCcEEEEEE
Confidence 3343 69999999999999999999996
No 112
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.2e-21 Score=189.11 Aligned_cols=265 Identities=18% Similarity=0.249 Sum_probs=201.2
Q ss_pred EEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecc
Q 009274 258 LAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE 336 (538)
Q Consensus 258 l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 336 (538)
+.|+ .+.++.|. ...|++|+..+++.......+...|+++.|+++ +.+|+.|..+|.|.|||..+.+....+...
T Consensus 183 ldWss~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~-G~~LavG~~~g~v~iwD~~~~k~~~~~~~~-- 258 (484)
T KOG0305|consen 183 LDWSSANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPD-GSHLAVGTSDGTVQIWDVKEQKKTRTLRGS-- 258 (484)
T ss_pred hhcccCCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCC-CCEEEEeecCCeEEEEehhhccccccccCC--
Confidence 4566 66777775 558999999999877776667899999999985 457799999999999999876555444432
Q ss_pred cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc
Q 009274 337 EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS 413 (538)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~ 413 (538)
+...+.++++++..+.+|+.|+.|..+|++..+.... +.+|...|..+.|+ +.++++|+.|+.+.|||....+
T Consensus 259 ----h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 259 ----HASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE 334 (484)
T ss_pred ----cCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc
Confidence 2334668888899999999999999999998876555 88999999999999 6699999999999999998888
Q ss_pred eeEEEecCCCCceEEEEEEcCC-CCEEEEEe--CCCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEE--EeCCC
Q 009274 414 LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSH--ESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFT--GGWDK 484 (538)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~--~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~s--gs~dg 484 (538)
++..+..|. ..+.. ++|+|- ..+||+|+ .|++|++||... .+..+. -.+.|.++.| ..+-|++ |-.++
T Consensus 335 p~~~~~~H~-aAVKA-~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n 411 (484)
T KOG0305|consen 335 PKFTFTEHT-AAVKA-LAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSEN 411 (484)
T ss_pred ccEEEeccc-eeeeE-eeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCC
Confidence 888887764 44444 677774 56888865 599999999653 333332 3467888888 3333444 33577
Q ss_pred eEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEcC
Q 009274 485 TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 485 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
.|.||+..+.+....+... ...+.....+||+ .+++|+.|.++++|++-
T Consensus 412 ~i~lw~~ps~~~~~~l~gH----~~RVl~la~SPdg~~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 412 QITLWKYPSMKLVAELLGH----TSRVLYLALSPDGETIVTGAADETLRFWNLF 461 (484)
T ss_pred cEEEEeccccceeeeecCC----cceeEEEEECCCCCEEEEecccCcEEecccc
Confidence 8999999886654443321 3335555566665 48899999999999873
No 113
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.9e-23 Score=203.89 Aligned_cols=232 Identities=16% Similarity=0.281 Sum_probs=182.6
Q ss_pred EEEEEEc---CCEEEEEeCCCcEEEEeCCC---CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 255 VTGLAVG---GGFLFSSSFDKSIHVWSLKD---FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 255 V~~l~~~---~~~l~s~s~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
+..+.|+ .++|||++..|.|.+||+.. .+.+..|..|+..++++.|++...+++++|+.||+|++||++..+..
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~ 169 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK 169 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc
Confidence 3445666 89999999999999999986 56677889999999999999999999999999999999999977665
Q ss_pred cceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEecCCcE
Q 009274 329 EPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTI 404 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i 404 (538)
........ ... -+.|+| .+++++++.+.|.+.+||++.. ++...+.+|.++|.|+.|+ ..+|++|+.|+.|
T Consensus 170 ~t~~~nSE----SiR-DV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~v 244 (839)
T KOG0269|consen 170 STFRSNSE----SIR-DVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMV 244 (839)
T ss_pred ccccccch----hhh-ceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccE
Confidence 55544111 111 235555 4669999999999999999864 5677889999999999999 4499999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCC-EEEEEe--CCCcEEEEeCCc---ceeeeccccceEEEEEe---CCC
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSH--ESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGK 475 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~--~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~---~~~ 475 (538)
+|||+.+++.......+....+. .+.|-|... .|++++ .|-.|+|||++. +..++..|...++.++| |..
T Consensus 245 kiWd~t~~~~~~~~tInTiapv~-rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~ 323 (839)
T KOG0269|consen 245 KIWDMTDSRAKPKHTINTIAPVG-RVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI 323 (839)
T ss_pred EEEeccCCCccceeEEeecceee-eeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce
Confidence 99999876654333333233334 468888754 566554 478899999876 56788889999999999 456
Q ss_pred EEEEEeCCCeEEEEecC
Q 009274 476 WLFTGGWDKTVSVQELA 492 (538)
Q Consensus 476 ~l~sgs~dg~v~iwd~~ 492 (538)
.+.+++.||+|..-.++
T Consensus 324 ~l~s~sKD~tv~qh~~k 340 (839)
T KOG0269|consen 324 NLWSCSKDGTVLQHLFK 340 (839)
T ss_pred eeEeecCccHHHHhhhh
Confidence 89999999988655444
No 114
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=3.8e-21 Score=165.06 Aligned_cols=251 Identities=15% Similarity=0.150 Sum_probs=198.8
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEE
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~ 287 (538)
+..+....++.+++.+..++.+.+|++ .||.+.|-.++|+ .+.+++++.|.+|++||+..+++...
T Consensus 23 v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~ 102 (313)
T KOG1407|consen 23 VHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTAR 102 (313)
T ss_pred ceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEE
Confidence 556777788889999999999999885 5799999999998 89999999999999999999999998
Q ss_pred EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEE
Q 009274 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (538)
Q Consensus 288 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iw 367 (538)
.....+. .-+.|+|+++ +++.++.|..|...|.++.+.....+...... -.++..++++++.....|.|.|.
T Consensus 103 i~~~~en-i~i~wsp~g~-~~~~~~kdD~it~id~r~~~~~~~~~~~~e~n------e~~w~~~nd~Fflt~GlG~v~IL 174 (313)
T KOG1407|consen 103 IETKGEN-INITWSPDGE-YIAVGNKDDRITFIDARTYKIVNEEQFKFEVN------EISWNNSNDLFFLTNGLGCVEIL 174 (313)
T ss_pred eeccCcc-eEEEEcCCCC-EEEEecCcccEEEEEecccceeehhcccceee------eeeecCCCCEEEEecCCceEEEE
Confidence 8765555 4567889665 66889999999999998655433332221111 12555667777766777999999
Q ss_pred ECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 368 SLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 368 d~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
....-+++..++.|.....||.|+ ++++++|+.|..+.+||+...-+++.+.... .....++|+.||++|++|++|
T Consensus 175 sypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRld--wpVRTlSFS~dg~~lASaSED 252 (313)
T KOG1407|consen 175 SYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLD--WPVRTLSFSHDGRMLASASED 252 (313)
T ss_pred eccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecccc--CceEEEEeccCcceeeccCcc
Confidence 999999999999999999999999 6799999999999999999888888776542 233347999999999999999
Q ss_pred CcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCC
Q 009274 446 GSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWD 483 (538)
Q Consensus 446 g~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~d 483 (538)
..|-|=+..+ .+..++ +.++...++| ...+|+-++.|
T Consensus 253 h~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 253 HFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred ceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence 9998887544 333333 5677788887 55677777655
No 115
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.9e-22 Score=185.33 Aligned_cols=220 Identities=21% Similarity=0.294 Sum_probs=172.4
Q ss_pred CcceeEEeecCCeEEEEEe------------------------------ecCCCcEEEEEEc---CCEEEEEeCCCcEEE
Q 009274 230 GVKDLVNGLSKGNVKFKDL------------------------------QGHRDCVTGLAVG---GGFLFSSSFDKSIHV 276 (538)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~l------------------------------~~h~~~V~~l~~~---~~~l~s~s~dg~i~i 276 (538)
-++.++.|.-+..+.+|+| .+|+++|.+++|+ .+.||+||.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 3557778888888888874 2699999999998 789999999999999
Q ss_pred EeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec-CCEE
Q 009274 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRYL 355 (538)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 355 (538)
||+.++++..++..|.+.|.++.|+|....++++|+.|+++.+.|.+........-.+..... ...+.+. ...+
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VE-----kv~w~~~se~~f 345 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVE-----KVAWDPHSENSF 345 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceE-----EEEecCCCceeE
Confidence 999999999999999999999999999999999999999999999986433332222222111 2345553 4488
Q ss_pred EEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEE
Q 009274 356 YTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLS 431 (538)
Q Consensus 356 ~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 431 (538)
++++.||+|+-+|+|+. +++++++.|.++|.+++++ ++++++++.|+.+++|++..-...........-....+++
T Consensus 346 ~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~ 425 (463)
T KOG0270|consen 346 FVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFA 425 (463)
T ss_pred EEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecc
Confidence 89999999999999975 8999999999999999998 7799999999999999997654422222111111233345
Q ss_pred EcCCC-CEEEEEeCCCcEEEEeCC
Q 009274 432 LTAVQ-HTLVVSHESGSIKVWRND 454 (538)
Q Consensus 432 ~~~~~-~~l~~~~~dg~i~iwd~~ 454 (538)
+.|+- ..++.|+..+.+++||+.
T Consensus 426 ~~~~~a~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 426 LDPDVAFTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred cCCCcceEEEecCccceEEEeecc
Confidence 55554 467778888889999954
No 116
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=1.4e-21 Score=172.17 Aligned_cols=219 Identities=17% Similarity=0.220 Sum_probs=179.8
Q ss_pred eccCcceeEEeecCCeEEEEEee---------cCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc
Q 009274 227 AAGGVKDLVNGLSKGNVKFKDLQ---------GHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH 293 (538)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~i~~l~---------~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 293 (538)
.+.++..+++++.|..+.+++++ .|.+.|+++.|. ...|++|+.||.|.+|+..+.+++.++++|.+
T Consensus 49 vAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~ 128 (362)
T KOG0294|consen 49 LAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKG 128 (362)
T ss_pred EEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccccc
Confidence 34567889999999999999864 699999999998 34899999999999999999999999999999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~ 373 (538)
.|+.++.+| .+++.++.+.|+.++.||+-.++........ .....+.|++.|.+++.++.+ .|-+|.+.+.+
T Consensus 129 ~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~------~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~ 200 (362)
T KOG0294|consen 129 QVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLK------NKATLVSWSPQGDHFVVSGRN-KIDIYQLDNAS 200 (362)
T ss_pred ccceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccC------CcceeeEEcCCCCEEEEEecc-EEEEEecccHh
Confidence 999999999 5668899999999999999887654443332 222346888999988888875 58999988776
Q ss_pred eeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEE-EEcCCCCEEEEEeCCCcEEEE
Q 009274 374 LSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL-SLTAVQHTLVVSHESGSIKVW 451 (538)
Q Consensus 374 ~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~dg~i~iw 451 (538)
....+.. ...+.|+.|. ++.|++|..|+.|.+||..+..+...+..|.. .+-.+. --.|++.+|++++.||.|++|
T Consensus 201 v~~~i~~-~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~-RVK~i~~~~~~~~~~lvTaSSDG~I~vW 278 (362)
T KOG0294|consen 201 VFREIEN-PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHEN-RVKDIASYTNPEHEYLVTASSDGFIKVW 278 (362)
T ss_pred Hhhhhhc-cccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchh-heeeeEEEecCCceEEEEeccCceEEEE
Confidence 6655542 3567888887 77999999999999999999888888887744 444433 335778899999999999999
Q ss_pred eCCc
Q 009274 452 RNDK 455 (538)
Q Consensus 452 d~~~ 455 (538)
|.+.
T Consensus 279 d~~~ 282 (362)
T KOG0294|consen 279 DIDM 282 (362)
T ss_pred Eccc
Confidence 9653
No 117
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=4.9e-21 Score=168.79 Aligned_cols=283 Identities=20% Similarity=0.306 Sum_probs=197.5
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceE--EEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHV--HTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~--~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
+..|+||.+.|++++|+ |++|+|++.|++|++|++.+.... +.++ -.-+.-+.++|.|+...+++++-...+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 34589999999999998 999999999999999999764321 1111 11234588999999999999988889999
Q ss_pred EEEccCCCCCc---ceeeecccC--CceeeeEE--EEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 009274 319 VWSFSFPLGHE---PLKKWNEEK--DWRYSGIH--ALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 319 vwd~~~~~~~~---~~~~~~~~~--~~~~~~~~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (538)
+|.+....... ....+..+. ..+...+. .+.-++.+|++++.|..|.+||++ |+.+..+......-+..+.+
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS 237 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS 237 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC
Confidence 99876433211 111111100 01111222 334456699999999999999998 89998887766666777777
Q ss_pred --CCEEEEEecCCcEEEEECC---CCc-----eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc------
Q 009274 392 --NGVLYSGSRDGTIRLWSLS---DHS-----LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------ 455 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------ 455 (538)
+.++++++.--.+++|.+- .|+ .+..+++|... +.. ++|+++...+++.+.||++++||+.-
T Consensus 238 P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~sa-V~~-~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~q 315 (420)
T KOG2096|consen 238 PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSA-VLA-AAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQ 315 (420)
T ss_pred CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhh-eee-eeeCCCcceeEEEecCCcEEEeeccceEecCC
Confidence 6699999999999999873 232 34556666443 333 79999999999999999999999542
Q ss_pred ---ceeee--ccc---cceE-EEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEE
Q 009274 456 ---FMKSM--QTH---KGSV-FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVG 525 (538)
Q Consensus 456 ---~~~~~--~~h---~~~v-~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg 525 (538)
.++.. ..| ..++ .+++|+|+.|+.+. ...+++|..++++........ ++..+.++.|. +|++++.
T Consensus 316 Dpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~----h~~~Is~is~~~~g~~~at 390 (420)
T KOG2096|consen 316 DPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDI----HSTTISSISYSSDGKYIAT 390 (420)
T ss_pred CchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHh----hcCceeeEEecCCCcEEee
Confidence 11111 111 1222 46778998887765 457999999887754433322 45556666664 8888887
Q ss_pred ECCCeEEEEE
Q 009274 526 CADRTVKVYY 535 (538)
Q Consensus 526 ~~dg~v~vw~ 535 (538)
+.|..+++..
T Consensus 391 cGdr~vrv~~ 400 (420)
T KOG2096|consen 391 CGDRYVRVIR 400 (420)
T ss_pred ecceeeeeec
Confidence 8888888865
No 118
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=6.4e-22 Score=182.97 Aligned_cols=208 Identities=22% Similarity=0.368 Sum_probs=174.4
Q ss_pred CCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
.++|.|++-+ |.+++.|+..|.+++|.+.+|+.+..+.+|-..|+++.|+. ++.++++|+.||.|.+|.+.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~------ 153 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLT------ 153 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEE------
Confidence 4779999887 78888888999999999999999999999999999999987 55588999999999999875
Q ss_pred ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe----CCEEEEEecCCcEE
Q 009274 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC----NGVLYSGSRDGTIR 405 (538)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~ 405 (538)
.++.+..|+ +-++.+.+..|.-+|+++... +.+++++|.|.+++
T Consensus 154 ------------------------~lv~a~~~~--------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k 201 (476)
T KOG0646|consen 154 ------------------------DLVSADNDH--------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK 201 (476)
T ss_pred ------------------------eecccccCC--------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence 244444444 456788888999999999988 34999999999999
Q ss_pred EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC------------------cceeeeccccc--
Q 009274 406 LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------------------KFMKSMQTHKG-- 465 (538)
Q Consensus 406 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~------------------~~~~~~~~h~~-- 465 (538)
+||+..+..+.++..+. ...+++++|-++.+++|+.+|.|.+.+.. .....+.+|.+
T Consensus 202 ~wdlS~g~LLlti~fp~---si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~ 278 (476)
T KOG0646|consen 202 LWDLSLGVLLLTITFPS---SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENES 278 (476)
T ss_pred EEEeccceeeEEEecCC---cceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCc
Confidence 99999999988887543 23447999999999999999999987632 13456678888
Q ss_pred eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 466 ~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
.|+|++. ||..|++|+.||+|.|||+.+.++.....
T Consensus 279 ~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 279 AITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred ceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence 8988875 99999999999999999999887665544
No 119
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.89 E-value=6e-20 Score=171.31 Aligned_cols=308 Identities=18% Similarity=0.263 Sum_probs=221.9
Q ss_pred CccceeeeeccCcceeEEeecCC--------eEEEEE---------eecCCCcEEEEEEc----CCEEEEE--eCCCcEE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKG--------NVKFKD---------LQGHRDCVTGLAVG----GGFLFSS--SFDKSIH 275 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~---------l~~h~~~V~~l~~~----~~~l~s~--s~dg~i~ 275 (538)
+.++-+..+.++-..++++...+ .+++|+ +..-...|+|++|+ |.+++.. +.+..+.
T Consensus 104 ~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lS 183 (626)
T KOG2106|consen 104 NDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLS 183 (626)
T ss_pred CCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccccc
Confidence 34455555555544555443333 355665 33566889999998 6666654 4566789
Q ss_pred EEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEE
Q 009274 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL 355 (538)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 355 (538)
+||.+.+......+..++.|....|+|.+.+++++++. |.+.+|+++.+...+....+..... ....+++|.++|+ +
T Consensus 184 VWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~ek-k~Vl~v~F~engd-v 260 (626)
T KOG2106|consen 184 VWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKREK-KFVLCVTFLENGD-V 260 (626)
T ss_pred hhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeeccccccc-eEEEEEEEcCCCC-E
Confidence 99999888888888888999999999999999888876 8999999988776666666555554 4444566777665 8
Q ss_pred EEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCc-----------eeEEEecCCC
Q 009274 356 YTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHS-----------LLTVLEEDSS 423 (538)
Q Consensus 356 ~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~~~~ 423 (538)
++|..+|.|.||+..+.+..+....|.+.|.+++.. ++.|++|+.|+.|..||-.-.+ .++++.....
T Consensus 261 iTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~ 340 (626)
T KOG2106|consen 261 ITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKG 340 (626)
T ss_pred EeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCchhcCCeeEEecCCC
Confidence 899999999999998888777777999999999998 8899999999999999832111 1111111100
Q ss_pred C---------------------------ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccccceEEEEEe--CC
Q 009274 424 G---------------------------AVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFL--EG 474 (538)
Q Consensus 424 ~---------------------------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~--~~ 474 (538)
. ....-++.+|+.+.+++++.|+.+++|+-.++..+... ..++.|+.| .|
T Consensus 341 di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~k~~wt~~~-~d~~~~~~fhpsg 419 (626)
T KOG2106|consen 341 DILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDHKLEWTKII-EDPAECADFHPSG 419 (626)
T ss_pred cEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCCceeEEEEe-cCceeEeeccCcc
Confidence 0 00112567788889999999999999995555444332 344555554 67
Q ss_pred CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CC-EEEEEECCCeEEEEEcC
Q 009274 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~vw~~~ 537 (538)
.++.|+..|...+.|.++........ ....++++.++ +| .|+.|+.|+.|++|.++
T Consensus 420 -~va~Gt~~G~w~V~d~e~~~lv~~~~------d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs 477 (626)
T KOG2106|consen 420 -VVAVGTATGRWFVLDTETQDLVTIHT------DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS 477 (626)
T ss_pred -eEEEeeccceEEEEecccceeEEEEe------cCCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence 99999999999999999866544332 23456666664 55 47789999999999875
No 120
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.3e-20 Score=186.00 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=194.3
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC-ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
.+|...-+.++|. |++|++++.||.|++|+..+- +...++..+...|.+++. ....|++|+.+++|.+|.+..+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~---~s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC---YSNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee---cccceEEeeccceEEEeeCCCC
Confidence 4688889999998 999999999999999997655 444555557888888876 3447899999999999999988
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCc
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT 403 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~ 403 (538)
.....+..+.... .+++++.+|++++.|+.|-.|++.++........+++|..+|.++.|+ +++|++.+.||.
T Consensus 87 ~~~~iL~Rftlp~-----r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~ 161 (933)
T KOG1274|consen 87 EEDTILARFTLPI-----RDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGK 161 (933)
T ss_pred Cccceeeeeeccc-----eEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCce
Confidence 7776666655433 367888899999999999999999999999999999999999999999 669999999999
Q ss_pred EEEEECCCCceeEEEecCC------CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeec--cccceEEEEEe-
Q 009274 404 IRLWSLSDHSLLTVLEEDS------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQ--THKGSVFAVFL- 472 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~--~h~~~v~~~~~- 472 (538)
|++||+.++.+..++..-. ...+....+|+|++..++..+.|+.|++|+... ....+. .+...+..+.|
T Consensus 162 v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~ws 241 (933)
T KOG1274|consen 162 VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWS 241 (933)
T ss_pred EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEc
Confidence 9999999988776664321 134556689999999999999999999998654 333332 23444555554
Q ss_pred -CCCEEEEEeCCCeEEEEecCC
Q 009274 473 -EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 473 -~~~~l~sgs~dg~v~iwd~~~ 493 (538)
+|+|||+++.||.|.|||+++
T Consensus 242 PnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 242 PNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred CCCcEEeeeccCCcEEEEeccc
Confidence 999999999999999999997
No 121
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.88 E-value=9.9e-21 Score=174.62 Aligned_cols=282 Identities=14% Similarity=0.159 Sum_probs=201.5
Q ss_pred eecCCCcEEEEEEc---C-CEEEEEeCCCcEEEEeCCC----CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 248 LQGHRDCVTGLAVG---G-GFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 248 l~~h~~~V~~l~~~---~-~~l~s~s~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
.+-|.+.|++++|+ . +++++|+.-|.|-+||+.+ ..-+..+..|..+|.++.|+|.+...+++.+.||+|++
T Consensus 182 ~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~ 261 (498)
T KOG4328|consen 182 AKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRL 261 (498)
T ss_pred eEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeee
Confidence 56688999999999 3 7899999999999999952 23356677899999999999999999999999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEe---CCEE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMSGHKSAVSTLAVC---NGVL 395 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~---~~~l 395 (538)
-|++.......+... ........+.++.+...++.+..=|...+||.+++.. ...+.-|...|++++++ +.++
T Consensus 262 ~D~~~~i~e~v~s~~---~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~l 338 (498)
T KOG4328|consen 262 QDFEGNISEEVLSLD---TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFL 338 (498)
T ss_pred eeecchhhHHHhhcC---ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhe
Confidence 999865433332221 1222333445666666777777778999999998765 66667789999999999 5699
Q ss_pred EEEecCCcEEEEECCCCceeEE--Ee-cCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC------cceeeecc---c
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTV--LE-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------KFMKSMQT---H 463 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~------~~~~~~~~---h 463 (538)
+++|.|++.+|||++....... +. ..|...+ ....|+|.+..|++.+.|..|+|||.. .+...+.. +
T Consensus 339 aT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV-~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t 417 (498)
T KOG4328|consen 339 ATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSV-NSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRT 417 (498)
T ss_pred eecccCcceeeeehhhhcCCCCcceeccccccee-eeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcc
Confidence 9999999999999987433221 21 2233333 446999999889999999999999963 12223321 1
Q ss_pred cceEEE----EEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEE-EECCCeEEEEEc
Q 009274 464 KGSVFA----VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFV-GCADRTVKVYYY 536 (538)
Q Consensus 464 ~~~v~~----~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~s-g~~dg~v~vw~~ 536 (538)
..+++- ..|+..++++|-.-..|-|+|-+.++....+.... ...+.....+ | +..+++ ++..|.|+||--
T Consensus 418 ~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~---~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 418 GRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPE---SSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred cccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcc---ccccccceeecccccceeccCCccceEEEEec
Confidence 112221 23488999999999999999999988554433221 1122222233 3 333555 567899999854
No 122
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.88 E-value=1.8e-20 Score=190.47 Aligned_cols=271 Identities=18% Similarity=0.251 Sum_probs=209.7
Q ss_pred CCCccceeeeeccCcceeEEee--cCCeEEEEE---------------------eecCCCcEEEEEEc--CCEEEEEeCC
Q 009274 217 SDGADIDQARAAGGVKDLVNGL--SKGNVKFKD---------------------LQGHRDCVTGLAVG--GGFLFSSSFD 271 (538)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~---------------------l~~h~~~V~~l~~~--~~~l~s~s~d 271 (538)
+.+..+..+...+++..++++. .++++.+|+ +..|.+.|+|+.|+ |++||+||.|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 4455588888899999999998 777777877 34699999999999 9999999999
Q ss_pred CcEEEEeCCC------------------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceee
Q 009274 272 KSIHVWSLKD------------------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK 333 (538)
Q Consensus 272 g~i~iwd~~~------------------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 333 (538)
+.|.||+... .+.+..+.+|...|.+++|+| +..++++++.|++|.+||..+.+... .
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~---v 166 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLK---V 166 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeee---e
Confidence 9999998762 246778899999999999999 56689999999999999998764333 3
Q ss_pred ecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC------CCeEEEEEe--CCEEEEEe----cC
Q 009274 334 WNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK------SAVSTLAVC--NGVLYSGS----RD 401 (538)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~~--~~~l~s~s----~d 401 (538)
...|... . .-..|.|-|++|++-+.|++|++|++.+....+.+.++. ..+..+.|+ +.+|++.. .-
T Consensus 167 l~~H~s~-V-KGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~ 244 (942)
T KOG0973|consen 167 LRGHQSL-V-KGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGK 244 (942)
T ss_pred eeccccc-c-cceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCc
Confidence 3333332 1 134788889999999999999999988777777765543 356788898 44777753 34
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCC-----CC------------EEEEEeCCCcEEEEeCCc--cee-eec
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV-----QH------------TLVVSHESGSIKVWRNDK--FMK-SMQ 461 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------~l~~~~~dg~i~iwd~~~--~~~-~~~ 461 (538)
.++.|.+-.+.+.-..+-+|+. . ..++.|+|. .+ .+|+|+.|++|.||.+.. ++. ...
T Consensus 245 ~~~~IieR~tWk~~~~LvGH~~-p-~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~ 322 (942)
T KOG0973|consen 245 STIAIIERGTWKVDKDLVGHSA-P-VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHN 322 (942)
T ss_pred ceeEEEecCCceeeeeeecCCC-c-eEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhh
Confidence 5688888877777777877765 3 334677652 11 688999999999999643 222 223
Q ss_pred cccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 462 THKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 462 ~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
-....|..++| ||..|+.+|.||+|.++.++..+
T Consensus 323 lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 323 LFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred hhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence 34568888888 89999999999999999987654
No 123
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=7.1e-21 Score=182.29 Aligned_cols=268 Identities=15% Similarity=0.136 Sum_probs=185.8
Q ss_pred CCEEEEEeCCCcEEEEeCCCCce------EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeec
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSH------VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN 335 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 335 (538)
...|+.+..||.|.++|...... +..+..|...|.++.|.| ++..|++++.|.++++||+.+......- ...
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~-~~~ 141 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGR-LNL 141 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecce-eec
Confidence 56789999999999999864322 355667999999999999 8889999999999999999876544332 222
Q ss_pred ccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCc--------------------e-------eEEecCCCC----
Q 009274 336 EEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGT--------------------L-------SCTMSGHKS---- 383 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~--------------------~-------~~~~~~h~~---- 383 (538)
+|.. .. ...||.+. ...|++|+.||.|.|||++-.. + +...+.+..
T Consensus 142 GH~~-Sv-kS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~s 219 (720)
T KOG0321|consen 142 GHTG-SV-KSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFS 219 (720)
T ss_pred cccc-cc-chhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceee
Confidence 2222 11 23466664 5599999999999999996431 0 111122333
Q ss_pred CeEEEEEe-CCEEEEEec-CCcEEEEECCCCceeEEEe------cCC---CCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 384 AVSTLAVC-NGVLYSGSR-DGTIRLWSLSDHSLLTVLE------EDS---SGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 384 ~v~~l~~~-~~~l~s~s~-dg~i~iwd~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
.|+.+.|- +..|++++. |+.|++||++......... .+. ...-...+.....|.+|++.+.|+.|+.|+
T Consensus 220 svTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~yn 299 (720)
T KOG0321|consen 220 SVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYN 299 (720)
T ss_pred eeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEe
Confidence 35556666 568999887 9999999999765432221 111 112223356667789999888999999999
Q ss_pred CCc----ceeeeccccce---E-EEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe---CCE
Q 009274 453 NDK----FMKSMQTHKGS---V-FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW---QGK 521 (538)
Q Consensus 453 ~~~----~~~~~~~h~~~---v-~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 521 (538)
+.. ++..+.++... + .+++|++.++++|+.|...++|.+...+........ +...++.+.|. ...
T Consensus 300 m~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~G----ht~eVt~V~w~pS~~t~ 375 (720)
T KOG0321|consen 300 MRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLG----HTREVTTVRWLPSATTP 375 (720)
T ss_pred ccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhC----cceEEEEEeeccccCCC
Confidence 654 44444444332 2 345679999999999999999999887654433322 23334555443 556
Q ss_pred EEEEECCCeEEEEEcC
Q 009274 522 LFVGCADRTVKVYYYG 537 (538)
Q Consensus 522 l~sg~~dg~v~vw~~~ 537 (538)
++++++|-.+++|++.
T Consensus 376 v~TcSdD~~~kiW~l~ 391 (720)
T KOG0321|consen 376 VATCSDDFRVKIWRLS 391 (720)
T ss_pred ceeeccCcceEEEecc
Confidence 9999999999999985
No 124
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=2.2e-21 Score=189.61 Aligned_cols=271 Identities=17% Similarity=0.211 Sum_probs=191.9
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCC----ceEEEEecC---CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFKGH---DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h---~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
..+|+.+ -..++.++.. .++||.+... ++...++.. ...+..+.|..-..+++++++..|.|.+||+...
T Consensus 42 ~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~ 120 (839)
T KOG0269|consen 42 ANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKS 120 (839)
T ss_pred cceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCcc
Confidence 3445554 3445555533 6777766432 222222221 1345678888778889999999999999999876
Q ss_pred CCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEecC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRD 401 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~d 401 (538)
...+.+..+..|.. ......|++ ..++|++|+.||+|++||++..+...++.+....|.++.|+ ++.++++...
T Consensus 121 ~rnk~l~~f~EH~R--s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds 198 (839)
T KOG0269|consen 121 IRNKLLTVFNEHER--SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS 198 (839)
T ss_pred ccchhhhHhhhhcc--ceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC
Confidence 55555555555543 122334444 46699999999999999999999999999989999999999 5699999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecc-ccceEEEEEe---CCC
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT-HKGSVFAVFL---EGK 475 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~-h~~~v~~~~~---~~~ 475 (538)
|.+++||+|....-......|.+.+.+ +.|+|++.+||+|+.|++|+|||... ......- ...++.++.| ...
T Consensus 199 G~lqlWDlRqp~r~~~k~~AH~GpV~c-~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 199 GYLQLWDLRQPDRCEKKLTAHNGPVLC-LNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSY 277 (839)
T ss_pred ceEEEeeccCchhHHHHhhcccCceEE-EeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccc
Confidence 999999999865433333344666665 69999999999999999999999552 1111112 2357778887 456
Q ss_pred EEEEEeC--CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC---EEEEEECCCeEEE
Q 009274 476 WLFTGGW--DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG---KLFVGCADRTVKV 533 (538)
Q Consensus 476 ~l~sgs~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~sg~~dg~v~v 533 (538)
.|++++. |-.|+|||+...-+....... +...++.++|+.+ .+.+++.||+|..
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~t~~e----H~~~vt~i~W~~~d~~~l~s~sKD~tv~q 336 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYATFLE----HTDSVTGIAWDSGDRINLWSCSKDGTVLQ 336 (839)
T ss_pred hhhhhhccccceEEEEeeccccccceeeec----cCccccceeccCCCceeeEeecCccHHHH
Confidence 7887774 778999999877544332222 5567778888742 3778999998753
No 125
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=5.6e-20 Score=161.52 Aligned_cols=239 Identities=16% Similarity=0.315 Sum_probs=173.7
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC----CceEEEEecCCcCeEEEEEe-cCCCCEEEEEcCCCcEEEEE
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYV-DEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~-~~~~~~l~s~~~dg~i~vwd 321 (538)
.+|.+-|+|+.|+ |+.+|||+.|++|+|||..+ ..+....+.|.+.|..+.|. |.-+..+++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 4799999999998 99999999999999999643 34566778999999999997 55678999999999999997
Q ss_pred ccCCCCCcc------eeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCC------ceeEEec-------C
Q 009274 322 FSFPLGHEP------LKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDG------TLSCTMS-------G 380 (538)
Q Consensus 322 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~------~~~~~~~-------~ 380 (538)
-........ ......... ... -++|.|. |-.+++++.||.++||+.... .+..++. .
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~Dsrs-sV~-DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRS-SVT-DVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred ecccccccccceeEEEEEeecCCc-cee-EEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 632211111 111111111 111 2244443 558999999999999987542 2222332 4
Q ss_pred CCCCeEEEEEe-----CCEEEEEecC-----CcEEEEECCCCc----eeEEEecCCCCceEEEEEEcCCC----CEEEEE
Q 009274 381 HKSAVSTLAVC-----NGVLYSGSRD-----GTIRLWSLSDHS----LLTVLEEDSSGAVSSVLSLTAVQ----HTLVVS 442 (538)
Q Consensus 381 h~~~v~~l~~~-----~~~l~s~s~d-----g~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~ 442 (538)
+..+..|+.|+ ..+|+.|+.+ +.++||....+. .+.++.. +...+.. ++|.|+- .+|+++
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d-~~dpI~d-i~wAPn~Gr~y~~lAvA 245 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD-HTDPIRD-ISWAPNIGRSYHLLAVA 245 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC-CCCccee-eeeccccCCceeeEEEe
Confidence 66778899998 3378888876 478888775543 2333443 3445555 6888863 579999
Q ss_pred eCCCcEEEEeCCc----------------------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 443 HESGSIKVWRNDK----------------------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 443 ~~dg~i~iwd~~~----------------------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+.|| |+||.++. .+..+..|++.|..+.| .|..|.+.|.||.||+|...
T Consensus 246 ~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 9999 99998541 24456789999999998 79999999999999999865
No 126
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.2e-19 Score=173.45 Aligned_cols=306 Identities=17% Similarity=0.231 Sum_probs=222.2
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEee----------cC-CCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDLQ----------GH-RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~----------~h-~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
.+.+.+++..+..++.+-.+|.+.+|++. || ...|.+++|+ +..|++.+.+|+|.-||+.++++...+
T Consensus 27 ~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~ 106 (691)
T KOG2048|consen 27 EIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNI 106 (691)
T ss_pred ceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEe
Confidence 36677888888889999999999999853 33 5689999999 999999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEE--EEeecCCEEEEeeCCCcEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIH--ALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~sg~~dg~i~i 366 (538)
....+.|++++.+|.+ ..++.|+.||.+..++...+... .-..+.. ....+. ++.+++..+++|+.||.|++
T Consensus 107 d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~-~~r~l~r----q~sRvLslsw~~~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 107 DSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKIT-YKRSLMR----QKSRVLSLSWNPTGTKIAGGSIDGVIRI 180 (691)
T ss_pred cCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEE-EEeeccc----ccceEEEEEecCCccEEEecccCceEEE
Confidence 9999999999998855 56788999997777766543211 1111111 112234 45556668999999999999
Q ss_pred EECCCCceeEEec----C----CCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCC
Q 009274 367 WSLLDGTLSCTMS----G----HKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH 437 (538)
Q Consensus 367 wd~~~~~~~~~~~----~----h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (538)
||..++..+.... + ...-|+++.+- ++.+++|..-|+|.+||...+..++.+..+.. .+.+ ++..++++
T Consensus 181 wd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~a-dVl~-Lav~~~~d 258 (691)
T KOG2048|consen 181 WDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDA-DVLA-LAVADNED 258 (691)
T ss_pred EEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhc-ceeE-EEEcCCCC
Confidence 9999988766221 1 22245666665 88999999999999999999999998887744 3333 78899999
Q ss_pred EEEEEeCCCcEEEEeCCcc------eeeeccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCc
Q 009274 438 TLVVSHESGSIKVWRNDKF------MKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSV 511 (538)
Q Consensus 438 ~l~~~~~dg~i~iwd~~~~------~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 511 (538)
++++++.|+.|.-|..... ......|...+.+++.-+..+++|+.|..+.+-.....+......+ ...+...
T Consensus 259 ~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~~~~~~h~~~-~~~p~~~- 336 (691)
T KOG2048|consen 259 RVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSREFKNMDHRQK-NLFPASD- 336 (691)
T ss_pred eEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccccCchhhhcc-ccccccc-
Confidence 9999999999998873322 2234568888999988677999999999999887765332211111 1111111
Q ss_pred eEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 512 ITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 512 ~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.....+..+|+.-=.+..+.+|.++
T Consensus 337 -~v~~a~~~~L~~~w~~h~v~lwrlG 361 (691)
T KOG2048|consen 337 -RVSVAPENRLLVLWKAHGVDLWRLG 361 (691)
T ss_pred -eeecCccceEEEEeccccccceecc
Confidence 1122234455555555556666654
No 127
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=4.4e-20 Score=162.59 Aligned_cols=269 Identities=17% Similarity=0.189 Sum_probs=202.7
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 290 (538)
-.+..|+.-+..++.|..+|.+.+|+| .+|..+|+|++|+ |+.|+|+|.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 457889999999999999999999995 5899999999999 9999999999999999999999999887
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECC
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~ 370 (538)
...+|+.+.|+|...+.+++.-.+..-.+-++..+.. ..+..-.............+.+.|+++++|...|.+.++|..
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 6789999999998888877776666666666654221 111111111111122223577889999999999999999999
Q ss_pred CCceeEEecCCC-CCeEEEEEe--CCEEEEEecCCcEEEEECCCC-------c--eeEEEecCCCCceEEEEEEcCCCCE
Q 009274 371 DGTLSCTMSGHK-SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH-------S--LLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 371 ~~~~~~~~~~h~-~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
+.+++..++-.. ..|..+.++ +.+++.-+.|+.||.|+++.- + +.+++..--.......++|+.+|.+
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeY 263 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEY 263 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccE
Confidence 999998887555 788888888 779999999999999998731 1 1122211111112233689999999
Q ss_pred EEEEeC-CCcEEEEe--CCcceeeecccc-ceEEEEEeC--CCEEEEEeCCCeEEEEecCC
Q 009274 439 LVVSHE-SGSIKVWR--NDKFMKSMQTHK-GSVFAVFLE--GKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 439 l~~~~~-dg~i~iwd--~~~~~~~~~~h~-~~v~~~~~~--~~~l~sgs~dg~v~iwd~~~ 493 (538)
++.++. ...++||. ++++++.+.|.. .....+.|+ ...+++- ..|.+++|....
T Consensus 264 v~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 264 VCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred EEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence 988764 45799997 678899998877 455667663 3445554 679999997643
No 128
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=3.1e-20 Score=176.59 Aligned_cols=285 Identities=19% Similarity=0.229 Sum_probs=202.6
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+.||++.|.||+.+ |.+|++|+.||+|+||.+.+|.+++++. ..+.|.|++|+|.....+++......+.+-+..
T Consensus 394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~ 472 (733)
T KOG0650|consen 394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPI 472 (733)
T ss_pred eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCcc
Confidence 3478999999999998 9999999999999999999999999987 456899999999777666666655666666543
Q ss_pred CCCCC-------------------cceeeeccc----CC---------ceeeeEEEEeecCCEEEEeeCC---CcEEEEE
Q 009274 324 FPLGH-------------------EPLKKWNEE----KD---------WRYSGIHALTTSGRYLYTGSGD---RTIKAWS 368 (538)
Q Consensus 324 ~~~~~-------------------~~~~~~~~~----~~---------~~~~~~~~~~~~~~~l~sg~~d---g~i~iwd 368 (538)
-+... ..+..|... .. .....-+.++..|+||++...+ ..|.|++
T Consensus 473 ~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQ 552 (733)
T KOG0650|consen 473 FGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQ 552 (733)
T ss_pred ccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEe
Confidence 22100 001111111 00 0001122456678899988664 5788999
Q ss_pred CCCCceeEEecCCCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
+...+...-|....+.|.++.|++ .++++++. ..|++||+.....+..+... ....+.++++|.|..|+.|+.|+
T Consensus 553 LSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg--~kwiS~msihp~GDnli~gs~d~ 629 (733)
T KOG0650|consen 553 LSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTG--SKWISSMSIHPNGDNLILGSYDK 629 (733)
T ss_pred cccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcC--CeeeeeeeecCCCCeEEEecCCC
Confidence 977766666666778899999993 36666654 67999999988777766543 33455589999999999999999
Q ss_pred cEEEEeCC---cceeeeccccceEEEEEeCC--CEEEEEeCCCeEEEEe------cCCCeeEe-eeecCCc--ccCCCce
Q 009274 447 SIKVWRND---KFMKSMQTHKGSVFAVFLEG--KWLFTGGWDKTVSVQE------LAGDEFEE-DVIPTGA--IPCGSVI 512 (538)
Q Consensus 447 ~i~iwd~~---~~~~~~~~h~~~v~~~~~~~--~~l~sgs~dg~v~iwd------~~~~~~~~-~~~~~~~--~~~~~~~ 512 (538)
.+..||+. ++.+++..|...++++++.+ .++++|+.||++.||. +-.+.+.. .....+. .....+.
T Consensus 630 k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVL 709 (733)
T KOG0650|consen 630 KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVL 709 (733)
T ss_pred eeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceE
Confidence 99999943 58889999999999999854 5799999999999984 22222221 1111111 1112233
Q ss_pred EEEEEe-CCEEEEEECCCeEEEE
Q 009274 513 TALLYW-QGKLFVGCADRTVKVY 534 (538)
Q Consensus 513 ~~~~~~-~~~l~sg~~dg~v~vw 534 (538)
.+.+.| .-.|++++.||+|++|
T Consensus 710 d~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 710 DTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eecccCCCceEEecCCCceEEee
Confidence 334444 4459999999999998
No 129
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=2.4e-20 Score=180.51 Aligned_cols=235 Identities=16% Similarity=0.219 Sum_probs=186.5
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecC--CCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE--DQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
-.+.+++.+ +++|++|..-|+++||++.+.+....++.|...|.|+.|+.. +..+|++++.|.-|+++|.....
T Consensus 460 ~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny-- 537 (1080)
T KOG1408|consen 460 FGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY-- 537 (1080)
T ss_pred cceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc--
Confidence 478999999 999999999999999999999999999999999999999843 45789999999999999987432
Q ss_pred cceeeecccCCceeeeEEEEeecC--CEEEEeeCCCcEEEEECCCCceeEEecC-----CCCCeEEEEEe--CCEEEEEe
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSG--RYLYTGSGDRTIKAWSLLDGTLSCTMSG-----HKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~--~~~l~s~s 399 (538)
..+.....|.. .+..+ .|..+| ..+++++.|..|.+--.+.......+.. ....++.++.. .+++++++
T Consensus 538 ~l~qtld~HSs-sITsv-KFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c 615 (1080)
T KOG1408|consen 538 DLVQTLDGHSS-SITSV-KFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC 615 (1080)
T ss_pred chhhhhccccc-ceeEE-EEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence 23333434332 22223 333344 4889999998876543332111222222 23567888887 45999999
Q ss_pred cCCcEEEEECCCCceeEEEecCCC--CceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe--C
Q 009274 400 RDGTIRLWSLSDHSLLTVLEEDSS--GAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--E 473 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~--~ 473 (538)
.|+.|+|||+.+++..+.|++.+. +.... +...|.|.|+++.+.|.++.++| .++++..+.+|...|+.+.| |
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIK-v~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nD 694 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIK-VILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLND 694 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEE-EEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeeccc
Confidence 999999999999999999987543 33333 58899999999999999999999 67899999999999999998 8
Q ss_pred CCEEEEEeCCCeEEEEecC
Q 009274 474 GKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 474 ~~~l~sgs~dg~v~iwd~~ 492 (538)
-+.|++.+.||.|.||.+.
T Consensus 695 CkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 695 CKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred chhheeecCCceEEEEECc
Confidence 8999999999999999875
No 130
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=4.3e-21 Score=171.93 Aligned_cols=214 Identities=14% Similarity=0.245 Sum_probs=170.4
Q ss_pred ceeEEeecCCeEEEEE---------eecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCC---------------------
Q 009274 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKD--------------------- 281 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~--------------------- 281 (538)
..+++|+.||.+++|+ ++.|.+.|..|++....+++++.|.+|+.|.++-
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~ 159 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKN 159 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccCCcceeeecccccccccccccc
Confidence 3566778888888887 5689999999999988899999999999997321
Q ss_pred ------C-----------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeee
Q 009274 282 ------F-----------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSG 344 (538)
Q Consensus 282 ------~-----------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 344 (538)
| .++..+.-....|.++.|+|....+|++|..|+.|.+||+++......+..-... .
T Consensus 160 ~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRT------N 233 (433)
T KOG0268|consen 160 SVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRT------N 233 (433)
T ss_pred ccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccc------c
Confidence 1 1233333344678899999989999999999999999999987665544432211 2
Q ss_pred EEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecC
Q 009274 345 IHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 345 ~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 421 (538)
..+|+|.+-.+++|+.|..++.||++.. .++....+|.+.|.+++|+ +..+++||.|.+|+||..+.+.........
T Consensus 234 ~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtk 313 (433)
T KOG0268|consen 234 TICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTK 313 (433)
T ss_pred ceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHh
Confidence 3488887779999999999999999875 4677889999999999999 779999999999999999887654433333
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
....+.+ +.|+.|.+++++|+.|+.|++|.
T Consensus 314 RMq~V~~-Vk~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 314 RMQHVFC-VKYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred hhheeeE-EEEeccccEEEecCCCcceeeee
Confidence 2344554 58999999999999999999997
No 131
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=8.7e-19 Score=169.37 Aligned_cols=276 Identities=18% Similarity=0.274 Sum_probs=204.3
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-eEEEEecC-CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTFKGH-DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
--..+|+|+||+ .+.||.+-.||.|-+|++...= +...+.++ +..|.+++|++ ++ .|++.+.+|.|.-||+.+.
T Consensus 23 ~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~-RLFS~g~sg~i~EwDl~~l 100 (691)
T KOG2048|consen 23 YKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GG-RLFSSGLSGSITEWDLHTL 100 (691)
T ss_pred eeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CC-eEEeecCCceEEEEecccC
Confidence 345889999999 7889999999999999997643 33445554 57899999984 33 5689999999999999876
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeE--EecCCCCCeEEEEEe-CC-EEEEEecC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC--TMSGHKSAVSTLAVC-NG-VLYSGSRD 401 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~-~~-~l~s~s~d 401 (538)
+....+.... ......+++|.+..++.|++||.++.++...++... .+...++.|.+++|+ .+ .+++|+.|
T Consensus 101 k~~~~~d~~g-----g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D 175 (691)
T KOG2048|consen 101 KQKYNIDSNG-----GAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID 175 (691)
T ss_pred ceeEEecCCC-----cceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccC
Confidence 5443332211 222345778888899999999988888887776544 344567899999999 33 69999999
Q ss_pred CcEEEEECCCCceeEEEec-----CC--CCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe
Q 009274 402 GTIRLWSLSDHSLLTVLEE-----DS--SGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL 472 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~ 472 (538)
|.|++||..++..+..... .. ...+.++ .+- ....|++|...|+|.+|| .+++++.+..|...|.++..
T Consensus 176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv-~~L-rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav 253 (691)
T KOG2048|consen 176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSV-LFL-RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAV 253 (691)
T ss_pred ceEEEEEcCCCceEEEeeecccccccCCceEEEEE-EEe-ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEE
Confidence 9999999999987763221 11 1122222 222 345799999999999999 56788999999999999976
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEE
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYY 535 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~ 535 (538)
++++++++|.|+.|.-|...+.+..+........ +..-+.+++.-+..+++|+.|..+.+-.
T Consensus 254 ~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~-h~hdvrs~av~~~~l~sgG~d~~l~i~~ 317 (691)
T KOG2048|consen 254 ADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDL-HAHDVRSMAVIENALISGGRDFTLAICS 317 (691)
T ss_pred cCCCCeEEEccCCCceEEEEecCCccceeeeccccC-CcccceeeeeecceEEecceeeEEEEcc
Confidence 6789999999999999988877543222222222 3334566666666899999999887643
No 132
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.86 E-value=9.5e-19 Score=168.35 Aligned_cols=261 Identities=16% Similarity=0.138 Sum_probs=178.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCce
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (538)
++.+++++.|+.|++||+.+++.+..+..+.. +.+++|+|++..++++++.++.|++||..+++....+. .+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~-- 74 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLP---SGPD-- 74 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEecc---CCCC--
Confidence 46789999999999999999999988886644 67899999877666788889999999998754322221 1111
Q ss_pred eeeEEEEeecCCEEEEe-eCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCC-cEEEEECCCCceeEE
Q 009274 342 YSGIHALTTSGRYLYTG-SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG-TIRLWSLSDHSLLTV 417 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg-~i~iwd~~~~~~~~~ 417 (538)
....+++++++.++++ +.|+.+++||+.+++.+..+.. ...+.+++|+ +.++++++.++ .+..||.++++....
T Consensus 75 -~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 75 -PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred -ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 1245788898866554 5689999999998888777753 3346788998 45777777765 467789988877665
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeCCc--ceeeecccc-----ce--EEEE--EeCCCEEEE-EeCCC
Q 009274 418 LEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDK--FMKSMQTHK-----GS--VFAV--FLEGKWLFT-GGWDK 484 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~--~~~~~~~h~-----~~--v~~~--~~~~~~l~s-gs~dg 484 (538)
...... . ..+.+++++++++++ ..++.|++||..+ ....+..+. .. ...+ ++++++++. .+.++
T Consensus 153 ~~~~~~--~-~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 153 VLVDQR--P-RFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred EEcCCC--c-cEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence 543222 2 236899999988655 4689999999654 333333221 11 1233 457887544 45577
Q ss_pred eEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEE-ECCCeEEEEEcCC
Q 009274 485 TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVG-CADRTVKVYYYGK 538 (538)
Q Consensus 485 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg-~~dg~v~vw~~~~ 538 (538)
.+.+||+.+.+........ ..+....+.+++. |+++ +.+|.|++||+.+
T Consensus 230 ~i~v~d~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~ 280 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLLVG-----QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAA 280 (300)
T ss_pred eEEEEECCCCcEEEEEEeC-----CCcceEEECCCCCEEEEEcCCCCeEEEEECCC
Confidence 8999999887765443221 1222333445554 6665 5699999999853
No 133
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=8.2e-22 Score=191.15 Aligned_cols=207 Identities=25% Similarity=0.433 Sum_probs=171.4
Q ss_pred ceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEE
Q 009274 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVY 300 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 300 (538)
..++.|..+..+.+|. |.+|..+|.|+.|+ ..+|++|+.||+|++||++.++.++++.+|...+..+.|
T Consensus 41 r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f 120 (825)
T KOG0267|consen 41 RSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDF 120 (825)
T ss_pred eeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeee
Confidence 4444454444444443 78999999999999 888999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC
Q 009274 301 VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG 380 (538)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 380 (538)
+|-+. ++++|+.|+.+++||.+...+..... . ......+..++|+|++++.|++|.++++||...|+...+|..
T Consensus 121 ~P~~~-~~a~gStdtd~~iwD~Rk~Gc~~~~~---s--~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~ 194 (825)
T KOG0267|consen 121 HPYGE-FFASGSTDTDLKIWDIRKKGCSHTYK---S--HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS 194 (825)
T ss_pred ccceE-EeccccccccceehhhhccCceeeec---C--CcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc
Confidence 99655 56999999999999998544433332 2 123455789999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeC--CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 381 HKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 381 h~~~v~~l~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
|.+.+.++.|++ -++++|+.|+++++||+++.+.+........+ +.+ ..|++++..+.+|..+.
T Consensus 195 ~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~-v~~-~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 195 HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDG-VRS-LAFNPDGKIVLSGEQIS 260 (825)
T ss_pred ccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCC-cee-eeecCCceeeecCchhh
Confidence 999999999993 38889999999999999998888777665333 333 69999999988887653
No 134
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=1.5e-19 Score=167.44 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=176.9
Q ss_pred EEeCCC-cEEEEeCCCCceEEEEecC-CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeee
Q 009274 267 SSSFDK-SIHVWSLKDFSHVHTFKGH-DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSG 344 (538)
Q Consensus 267 s~s~dg-~i~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 344 (538)
+++.|. ++.+||+.+|....++++. ...-.++.... ...++++-.....+.+|.+............. ....
T Consensus 12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~-~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~P-----g~v~ 85 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALN-NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLP-----GPVH 85 (476)
T ss_pred ccCCCCcceeEEecCCCceeEEecCcccccchhhhhhc-hhheeeecccCccccccccCchhhhhhhcccc-----ccee
Confidence 344554 4999999999999999865 22222222221 23344444455689999987543332111100 1122
Q ss_pred EEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECC---------CCc
Q 009274 345 IHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS---------DHS 413 (538)
Q Consensus 345 ~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~---------~~~ 413 (538)
+...+++|.+++.|+..|.|++|.+.+|..+..+.+|-..|+|+.|+ +.++++||.||.|.+|++. +-+
T Consensus 86 al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~ 165 (476)
T KOG0646|consen 86 ALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVK 165 (476)
T ss_pred eeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcc
Confidence 44566778889988899999999999999999999999999999999 4599999999999999874 234
Q ss_pred eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEE--EeCCCEEEEEeCCCeEEEE
Q 009274 414 LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~--~~~~~~l~sgs~dg~v~iw 489 (538)
+.+.+..|........+.+.+....+++++.|.++++||+. ..+.++.. ...+.++ ++-++.++.|+.+|.|.+.
T Consensus 166 p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f-p~si~av~lDpae~~~yiGt~~G~I~~~ 244 (476)
T KOG0646|consen 166 PLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF-PSSIKAVALDPAERVVYIGTEEGKIFQN 244 (476)
T ss_pred ceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec-CCcceeEEEcccccEEEecCCcceEEee
Confidence 56666655443333223333445789999999999999954 44444433 3445555 5678999999999999998
Q ss_pred ecCCCeeEe-----e--------eecCCcccCCCceEEEEEe-CC-EEEEEECCCeEEEEEcC
Q 009274 490 ELAGDEFEE-----D--------VIPTGAIPCGSVITALLYW-QG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 490 d~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~vw~~~ 537 (538)
++..-.... . .........+..++++..+ |+ .|++|+.||+|.|||+.
T Consensus 245 ~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 245 LLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred ehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 875432100 0 0000011122467776665 55 48889999999999974
No 135
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.85 E-value=5.1e-20 Score=169.46 Aligned_cols=236 Identities=20% Similarity=0.236 Sum_probs=167.0
Q ss_pred EEEEEecC------CCCEEEEEcCCCcEEEEEccCCCCCcceeeec--------------ccCCceeeeEEEEeecC---
Q 009274 296 MAVVYVDE------DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN--------------EEKDWRYSGIHALTTSG--- 352 (538)
Q Consensus 296 ~~l~~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--- 352 (538)
.|+.|... .++++|.|+.|..|.|||+.-.....+...+. .....+...+.+++++.
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 56677532 35699999999999999986432221111111 00011222334555543
Q ss_pred CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCce-eEEEecCCCCceEE
Q 009274 353 RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSL-LTVLEEDSSGAVSS 428 (538)
Q Consensus 353 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~ 428 (538)
+.|++||.|.+|++||+.++++..++..|.+.|.++.|+ +.+|++|+.|+++.+.|.|.... -..++. .+.+-.
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~--~g~VEk 334 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF--DGEVEK 334 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe--ccceEE
Confidence 489999999999999999999999999999999999999 56999999999999999995322 122221 233444
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 429 VLSLTAV-QHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 429 ~~~~~~~-~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
+.|.|. ...++++..||+++-+|.+ +++.+++.|.++|.++++ ...+++|++.|+.|++|++..........
T Consensus 335 -v~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~ 413 (463)
T KOG0270|consen 335 -VAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE 413 (463)
T ss_pred -EEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc
Confidence 466654 5678888899999999965 578899999999999987 56789999999999999997654322222
Q ss_pred cCCcccCCCceEEEEEe---CCEEEEEECCCeEEEEEcC
Q 009274 502 PTGAIPCGSVITALLYW---QGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 502 ~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~v~vw~~~ 537 (538)
+... -+ ...++... ...++.|+..+.++|||+.
T Consensus 414 ~~~~--~~-rl~c~~~~~~~a~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 414 HSFK--LG-RLHCFALDPDVAFTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred cccc--cc-ceeecccCCCcceEEEecCccceEEEeecc
Confidence 2111 11 12222222 3458889999999999975
No 136
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.85 E-value=2.5e-19 Score=158.85 Aligned_cols=282 Identities=16% Similarity=0.231 Sum_probs=191.1
Q ss_pred eecCCCcEEEEEEc-------CCEEEEEeCCCcEEEEeCCCC---ceEEEEe--cCCcCeEEEEEec---CCCCEEEEEc
Q 009274 248 LQGHRDCVTGLAVG-------GGFLFSSSFDKSIHVWSLKDF---SHVHTFK--GHDHKVMAVVYVD---EDQPLCISGD 312 (538)
Q Consensus 248 l~~h~~~V~~l~~~-------~~~l~s~s~dg~i~iwd~~~~---~~~~~~~--~h~~~v~~l~~~~---~~~~~l~s~~ 312 (538)
.++|..+|..++|+ .+.++|++.+ .+.+|..... ..++.+. .|......++|+- +++.+++.|+
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G 112 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG 112 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence 56899999999997 4567777654 7888886532 3334433 3677888899873 3466889999
Q ss_pred CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEE
Q 009274 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTL 388 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l 388 (538)
.-|.|+|.|+.+++....+..... ....+ .+.| +.++++++|.|.+|++||+++..++..+ .+|.+.|.++
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~----sINei-k~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSv 187 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGG----SINEI-KFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSV 187 (385)
T ss_pred ceeEEEEEecchhhhccceeccCc----cchhh-hcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEE
Confidence 999999999988766555544322 22222 3344 4569999999999999999999999887 6799999999
Q ss_pred EEe--CCEEEEEecCCcEEEEECCCCceeEEEecC------CC-----C-----ceEEEEEEcC--------CCCEEEEE
Q 009274 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEED------SS-----G-----AVSSVLSLTA--------VQHTLVVS 442 (538)
Q Consensus 389 ~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~~-----~-----~~~~~~~~~~--------~~~~l~~~ 442 (538)
.|+ +.++++|+.|.+|++|++...+....++.. .. . ...+...++. -|+++++-
T Consensus 188 D~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSk 267 (385)
T KOG1034|consen 188 DFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSK 267 (385)
T ss_pred EEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeec
Confidence 999 669999999999999999854321111100 00 0 0000011111 16789999
Q ss_pred eCCCcEEEEeCCccee----------------eeccccceEEEEEe----CCCEEEEEeCCCeEEEEecCCCeeEeeeec
Q 009274 443 HESGSIKVWRNDKFMK----------------SMQTHKGSVFAVFL----EGKWLFTGGWDKTVSVQELAGDEFEEDVIP 502 (538)
Q Consensus 443 ~~dg~i~iwd~~~~~~----------------~~~~h~~~v~~~~~----~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 502 (538)
+-++.|..|..++... .+......++-+.| -++.|+.|...|.|++||++..+.......
T Consensus 268 scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl 347 (385)
T KOG1034|consen 268 SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTL 347 (385)
T ss_pred ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceE
Confidence 9999999998643221 22223334444433 578999999999999999987765322222
Q ss_pred CCcccCCCceEEE-EEeCCE-EEEEECCCeEEEEEc
Q 009274 503 TGAIPCGSVITAL-LYWQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 503 ~~~~~~~~~~~~~-~~~~~~-l~sg~~dg~v~vw~~ 536 (538)
.... .+..+.-. ++.|+. |+..++|++|.-||-
T Consensus 348 ~~s~-~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 348 THSK-SGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred Eecc-ccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 2222 23344444 444665 667899999999984
No 137
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=3e-19 Score=157.62 Aligned_cols=246 Identities=15% Similarity=0.200 Sum_probs=169.1
Q ss_pred EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcE
Q 009274 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTI 364 (538)
Q Consensus 286 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i 364 (538)
..+++|.+.|++++|+.++ ..|++++.|++|++|+++.-.... -+.........-.....|+||-+ .+++.-...++
T Consensus 80 ~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~e-Hr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKE-HRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhh-hhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 3578999999999998855 577999999999999987532111 01111111111223458888877 45555556689
Q ss_pred EEEECCC---CceeEE--------e-cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEE
Q 009274 365 KAWSLLD---GTLSCT--------M-SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (538)
Q Consensus 365 ~iwd~~~---~~~~~~--------~-~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (538)
++|.+.. |..... + +.|.-.+..+-.. ..++++++.|..|.+|+++ |+.+..+......... .
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~--a 234 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYD--A 234 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccc--e
Confidence 9998643 211111 1 2345555555555 3499999999999999998 8888888765443333 6
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeC---C-------cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC----
Q 009274 431 SLTAVQHTLVVSHESGSIKVWRN---D-------KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD---- 494 (538)
Q Consensus 431 ~~~~~~~~l~~~~~dg~i~iwd~---~-------~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~---- 494 (538)
+.+|+|+++++++..-.+++|.. + .....+++|+..|.+++| +...++|.|.||++++||..-.
T Consensus 235 avSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~ 314 (420)
T KOG2096|consen 235 AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG 314 (420)
T ss_pred eeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence 89999999999999999999972 1 245678999999999988 7889999999999999998521
Q ss_pred ---eeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEc
Q 009274 495 ---EFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 495 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
+.............+.++....+|++..++.+....++++.-
T Consensus 315 qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~s 359 (420)
T KOG2096|consen 315 QDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFAS 359 (420)
T ss_pred CCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEc
Confidence 111111011111234466777778888888777777887753
No 138
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.3e-21 Score=187.01 Aligned_cols=234 Identities=21% Similarity=0.375 Sum_probs=189.0
Q ss_pred CCeEEEEE---eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 240 KGNVKFKD---LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 240 ~~~~~i~~---l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
....++|+ +..|...|.|+..- ++.+++|+.|-.+-+|.+.....+..|.+|..+|.++.|++.
T Consensus 13 ~t~Lr~~~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~----------- 81 (825)
T KOG0267|consen 13 ATKLRVWDTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTS----------- 81 (825)
T ss_pred eeccccccchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcc-----------
Confidence 33444555 34688888888764 899999999999999999887778889999999999988652
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (538)
..+|++|+.+|+|++||+..++.++++.+|...+.++.|+ +
T Consensus 82 -------------------------------------E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~ 124 (825)
T KOG0267|consen 82 -------------------------------------ERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYG 124 (825)
T ss_pred -------------------------------------hhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccce
Confidence 3356777788888888888888889999999999999999 5
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEE
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAV 470 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~ 470 (538)
.+.++|+.|+.+++||++...+.+.+..+ .. +..++.++|+|+++++|+.|..+++||. ++....|..|.+.+.++
T Consensus 125 ~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~-~~-vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sl 202 (825)
T KOG0267|consen 125 EFFASGSTDTDLKIWDIRKKGCSHTYKSH-TR-VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSL 202 (825)
T ss_pred EEeccccccccceehhhhccCceeeecCC-cc-eeEEEeecCCCceeeccCCcceeeeeccccccccccccccccccccc
Confidence 68899999999999999988899998874 33 4555899999999999999999999994 57888999999999999
Q ss_pred Ee--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEEC
Q 009274 471 FL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCA 527 (538)
Q Consensus 471 ~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 527 (538)
.+ ..-++++||.|+++++||+++.+........ ...+....+.+++..+.++.
T Consensus 203 e~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~----~~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 203 EFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPE----TDGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred ccCchhhhhccCCCCceeeeeccceeEEeeccCCc----cCCceeeeecCCceeeecCc
Confidence 87 5668899999999999999988765544433 22344444555776554433
No 139
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.84 E-value=8e-19 Score=169.89 Aligned_cols=283 Identities=17% Similarity=0.213 Sum_probs=198.2
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC--------------------------------------------
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-------------------------------------------- 282 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~-------------------------------------------- 282 (538)
.||++.|.++.|+ +..|+++|.|.++.+|...+.
T Consensus 264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlW 343 (764)
T KOG1063|consen 264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLW 343 (764)
T ss_pred cCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEE
Confidence 4999999999999 668999999999999965421
Q ss_pred --------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeec-ccCCceeeeEEEEeecCC
Q 009274 283 --------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN-EEKDWRYSGIHALTTSGR 353 (538)
Q Consensus 283 --------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 353 (538)
.....+.+|.+.|.+++|.|.++ ++++.+.|.+-|++---..+. . -.... +.....-..+.++-+...
T Consensus 344 kt~d~~~w~~~~~iSGH~~~V~dv~W~psGe-flLsvs~DQTTRlFa~wg~q~-~-wHEiaRPQiHGyDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 344 KTKDKTFWTQEPVISGHVDGVKDVDWDPSGE-FLLSVSLDQTTRLFARWGRQQ-E-WHEIARPQIHGYDLTCLSFVNEDL 420 (764)
T ss_pred eccCccceeeccccccccccceeeeecCCCC-EEEEeccccceeeeccccccc-c-eeeecccccccccceeeehccCCc
Confidence 00112347889999999998666 778999999999986441111 1 11111 111111112233333344
Q ss_pred EEEEeeCCCcEEEEECCCC-------------------------------------------------------------
Q 009274 354 YLYTGSGDRTIKAWSLLDG------------------------------------------------------------- 372 (538)
Q Consensus 354 ~l~sg~~dg~i~iwd~~~~------------------------------------------------------------- 372 (538)
.+++|.+...+|+|+....
T Consensus 421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L 500 (764)
T KOG1063|consen 421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL 500 (764)
T ss_pred eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence 7888888888899886321
Q ss_pred ---------------ceeEEecCCCCCeEEEEEe--CCEEEEEecCC-----cEEEEECCCCceeEEEecCCCCceEEEE
Q 009274 373 ---------------TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG-----TIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (538)
Q Consensus 373 ---------------~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (538)
-.++.+.||...|++++.+ ++++++++... .|++|+..+....+.+..|.- . ...+
T Consensus 501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL-T-VT~l 578 (764)
T KOG1063|consen 501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL-T-VTRL 578 (764)
T ss_pred cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce-E-EEEE
Confidence 0112345888999999999 67999988654 489999999888887877643 2 3347
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCc------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeec
Q 009274 431 SLTAVQHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIP 502 (538)
Q Consensus 431 ~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 502 (538)
.|+||+++|++.+.|+++.+|...+ .....+.|+.-|.+++| ++.+++|+|.|.+|++|.......... ..
T Consensus 579 ~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i-~~ 657 (764)
T KOG1063|consen 579 AFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYI-SR 657 (764)
T ss_pred EECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhh-hh
Confidence 9999999999999999999997432 12336789999999887 888999999999999999987731111 11
Q ss_pred CCcccCCCceEEEEEe------CC-EEEEEECCCeEEEEEcC
Q 009274 503 TGAIPCGSVITALLYW------QG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 503 ~~~~~~~~~~~~~~~~------~~-~l~sg~~dg~v~vw~~~ 537 (538)
......+..++++.+. .+ .+++|-..|.|.+|+..
T Consensus 658 ~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 658 FACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred hchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 1223345556665553 12 35678899999999864
No 140
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.84 E-value=1.7e-19 Score=159.92 Aligned_cols=241 Identities=16% Similarity=0.199 Sum_probs=184.7
Q ss_pred cCCCcEEEEEEc------CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 250 GHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 250 ~h~~~V~~l~~~------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
.|...-..++|+ +.++|.|+.-|.|+|.|+.+++....+.+|...|+.+.++|...+++++++.|..|++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 477888888886 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc------ee----------------E-----
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT------LS----------------C----- 376 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~------~~----------------~----- 376 (538)
+..+...+.....|... .. ...++.++.++++++.|.++++|++...+ +. .
T Consensus 167 ~~~Cv~VfGG~egHrde-VL-SvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDE-VL-SVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred CCeEEEEecccccccCc-EE-EEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 98877777766666652 22 23677788999999999999999997321 00 0
Q ss_pred -EecCCCCCeEEEEEeCCEEEEEecCCcEEEEEC-CCCcee-------------EEEecCCCCceEEEEEEcCCCCEEEE
Q 009274 377 -TMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSL-SDHSLL-------------TVLEEDSSGAVSSVLSLTAVQHTLVV 441 (538)
Q Consensus 377 -~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~ 441 (538)
+-.-|...|-|+.|-++++++=|.++.|..|.. +-++.+ ..+....-....-..++.+-+++|+.
T Consensus 245 st~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~ 324 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL 324 (385)
T ss_pred cccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh
Confidence 113478888999999999999999999999987 222221 12222111112223567788899999
Q ss_pred EeCCCcEEEEeCCcc----eeeecc--ccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 442 SHESGSIKVWRNDKF----MKSMQT--HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 442 ~~~dg~i~iwd~~~~----~~~~~~--h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
|...|.+++||++.. ..++.. ....|...++ |+..|+....|++|--||.-
T Consensus 325 gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 325 GNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 999999999996531 112221 1235555555 99999999999999999853
No 141
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.83 E-value=6e-17 Score=151.47 Aligned_cols=297 Identities=18% Similarity=0.240 Sum_probs=217.2
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEeec------------C-CCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDLQG------------H-RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~------------h-~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
.+..+.+.+.+..++.....+.+.+|++.+ + +.-|.|++|. +.-++||..+|.|.||+..+.+..+
T Consensus 202 ~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k 281 (626)
T KOG2106|consen 202 VVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISK 281 (626)
T ss_pred eEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEe
Confidence 355677788888888888888888887543 2 3689999999 8899999999999999998888887
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
....|.+.|.+++...++ .+++|+.|..|..|| ..-+........ .....+..+.+.+.-|+.|...+.|--
T Consensus 282 ~~~aH~ggv~~L~~lr~G--tllSGgKDRki~~Wd-~~y~k~r~~elP-----e~~G~iRtv~e~~~di~vGTtrN~iL~ 353 (626)
T KOG2106|consen 282 QVHAHDGGVFSLCMLRDG--TLLSGGKDRKIILWD-DNYRKLRETELP-----EQFGPIRTVAEGKGDILVGTTRNFILQ 353 (626)
T ss_pred EeeecCCceEEEEEecCc--cEeecCccceEEecc-ccccccccccCc-----hhcCCeeEEecCCCcEEEeeccceEEE
Confidence 777999999999987644 356799999999999 222211111111 122335556665555888888777766
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeC
Q 009274 367 WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 444 (538)
=.+.++-.+ ...+|......++.+ .+.+++++.|+.+++|+ ..++..+.....+ ..+..|+|.| .++.|+.
T Consensus 354 Gt~~~~f~~-~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~---~~~~~fhpsg-~va~Gt~ 426 (626)
T KOG2106|consen 354 GTLENGFTL-TVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDP---AECADFHPSG-VVAVGTA 426 (626)
T ss_pred eeecCCceE-EEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCc---eeEeeccCcc-eEEEeec
Confidence 666655444 345788999999988 56999999999999999 5566665554322 2336999999 9999999
Q ss_pred CCcEEEEeCCc-ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CC
Q 009274 445 SGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QG 520 (538)
Q Consensus 445 dg~i~iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 520 (538)
.|...+.|..+ ..-++.....++.++.+ +|.+|+.|+.|+.|++|.++.+.......... +++.++.+.|+ |+
T Consensus 427 ~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~---~gs~ithLDwS~Ds 503 (626)
T KOG2106|consen 427 TGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKC---SGSPITHLDWSSDS 503 (626)
T ss_pred cceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeee---cCceeEEeeecCCC
Confidence 99999999665 22223333667777765 99999999999999999997654333222221 33677777776 55
Q ss_pred E-EEEEECCCeEEEEE
Q 009274 521 K-LFVGCADRTVKVYY 535 (538)
Q Consensus 521 ~-l~sg~~dg~v~vw~ 535 (538)
+ +.+-+-|-.|..|.
T Consensus 504 ~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 504 QFLVSNSGDYEILYWK 519 (626)
T ss_pred ceEEeccCceEEEEEc
Confidence 5 56677888899994
No 142
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.83 E-value=8.2e-19 Score=153.25 Aligned_cols=204 Identities=18% Similarity=0.282 Sum_probs=159.0
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc----e-------eeecccCCceeeeEEEEeecCCEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP----L-------KKWNEEKDWRYSGIHALTTSGRYLYT 357 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (538)
..|.+.|+++..-+..++++++|+.||.|.+||++....... . +.....+...+.....+..|...+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 468899999999999999999999999999999986431110 0 11111222334444455567779999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-----CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 009274 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-----NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (538)
Q Consensus 358 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (538)
++.|.++++||.++.+....|+ ..+.|++-+++ .-++++|..|-.|++.|+.+|..-+++.+|.. .+.. +.|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~-~vla-V~W 196 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRD-GVLA-VEW 196 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccC-ceEE-EEe
Confidence 9999999999999988887776 56778877777 23788889999999999999999999998854 4444 578
Q ss_pred cCCCC-EEEEEeCCCcEEEEeCCcc---ee--------------eeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 433 TAVQH-TLVVSHESGSIKVWRNDKF---MK--------------SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 433 ~~~~~-~l~~~~~dg~i~iwd~~~~---~~--------------~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+|... .|++|+.||.|++||.++. .. .-..|.+.+..++| ++.++++.+.|..+++|+..
T Consensus 197 sp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 197 SPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred ccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 88665 5778999999999996631 11 23457788999998 99999999999999999998
Q ss_pred CCe
Q 009274 493 GDE 495 (538)
Q Consensus 493 ~~~ 495 (538)
.++
T Consensus 277 ~G~ 279 (397)
T KOG4283|consen 277 SGR 279 (397)
T ss_pred cCc
Confidence 765
No 143
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.83 E-value=7.7e-19 Score=158.42 Aligned_cols=232 Identities=20% Similarity=0.291 Sum_probs=167.7
Q ss_pred ecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCC----------------CCceEEEEecCCcCeEEEEEecCCCCEE
Q 009274 249 QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLK----------------DFSHVHTFKGHDHKVMAVVYVDEDQPLC 308 (538)
Q Consensus 249 ~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~----------------~~~~~~~~~~h~~~v~~l~~~~~~~~~l 308 (538)
-+|.+.++.+..+ ..+.++=+..|.|+|||+. ..+++.++.+|...=++++|+|-....+
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3566667666665 3455556778899999874 2467888999999999999999666667
Q ss_pred EEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCc---eeEEecCCCCC
Q 009274 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGT---LSCTMSGHKSA 384 (538)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~---~~~~~~~h~~~ 384 (538)
++|..-+.|++|...++.-......+..|.. ...-++++|..+ .|++||.||+|+|||+|.+. ++.+ +.|.+.
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~--SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sD 304 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTK--SVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSD 304 (440)
T ss_pred ccCccccceEeeeeccCceeecCcccccccc--chhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCc
Confidence 8999999999999887654433333333221 112346777544 99999999999999999883 3333 889999
Q ss_pred eEEEEEe--CCEEEEEecCCcEEEEECCC---CceeEEEecCCCCceEEEEEEcCC-CCEEEEEeCCCcEEEEeCCc---
Q 009274 385 VSTLAVC--NGVLYSGSRDGTIRLWSLSD---HSLLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRNDK--- 455 (538)
Q Consensus 385 v~~l~~~--~~~l~s~s~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~--- 455 (538)
|+.|.|+ -.+|++|+.||+++|||+|+ ++++..++.| ...+++ +.|+|. ...|++++.|.+|.+||+.-
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H-k~pIts-ieW~p~e~s~iaasg~D~QitiWDlsvE~D 382 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH-KAPITS-IEWHPHEDSVIAASGEDNQITIWDLSVEAD 382 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEec-cCCeeE-EEeccccCceEEeccCCCcEEEEEeeccCC
Confidence 9999999 33899999999999999986 4567888876 455555 588875 56788899999999999431
Q ss_pred ---------------ceeeecccc--ceEEEEEe---CCCEEEEEeCCCe
Q 009274 456 ---------------FMKSMQTHK--GSVFAVFL---EGKWLFTGGWDKT 485 (538)
Q Consensus 456 ---------------~~~~~~~h~--~~v~~~~~---~~~~l~sgs~dg~ 485 (538)
+-+.+-.|. ..+..+.| ...++++.+.||.
T Consensus 383 ~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 383 EEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred hhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 111222242 24455666 4557888888873
No 144
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=3.6e-19 Score=158.70 Aligned_cols=265 Identities=13% Similarity=0.179 Sum_probs=182.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCce
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (538)
..+|++-..|+|++||..+++.+..++++...++.+.|... +...+.+|+.||+|++||+++......+..-.. ..
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~-~~-- 117 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ-SG-- 117 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC-CC--
Confidence 66888888999999999999999999999999999999875 677889999999999999998765544433222 11
Q ss_pred eeeEEEEee--cCCEEEEeeC----CCcEEEEECCCCce-eEEe-cCCCCCeEEEEEe---CCEEEEEecCCcEEEEECC
Q 009274 342 YSGIHALTT--SGRYLYTGSG----DRTIKAWSLLDGTL-SCTM-SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 342 ~~~~~~~~~--~~~~l~sg~~----dg~i~iwd~~~~~~-~~~~-~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~ 410 (538)
.+..++.. .++.+++|+. |-.|.+||+|..+. +..+ ..|.+.|+++.|+ +++|++||.||.+.++|+.
T Consensus 118 -~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 118 -TPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred -CcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 12334444 5667777754 67899999998766 5554 6799999999999 6699999999999999997
Q ss_pred CCce----eEEEecCCCCceEEEEEEcCCC-CEEEEEeCCCcEEEEeCCcc--eeeecc-------------ccceEEEE
Q 009274 411 DHSL----LTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRNDKF--MKSMQT-------------HKGSVFAV 470 (538)
Q Consensus 411 ~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~--~~~~~~-------------h~~~v~~~ 470 (538)
.... +..+.. ...+.. +.|..++ +.|.+-+..++..+|+.... ...+.. -..-|.+.
T Consensus 197 ~d~EeDaL~~viN~--~sSI~~-igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~ 273 (376)
T KOG1188|consen 197 KDNEEDALLHVINH--GSSIHL-IGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH 273 (376)
T ss_pred CCcchhhHHHhhcc--cceeee-eeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc
Confidence 6432 233322 222333 5666555 56888889999999985431 111111 11223444
Q ss_pred Ee-CCCEEEEEeC-CCeEEEEecCC---CeeEe-eeecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEEc
Q 009274 471 FL-EGKWLFTGGW-DKTVSVQELAG---DEFEE-DVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 471 ~~-~~~~l~sgs~-dg~v~iwd~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~~ 536 (538)
++ +....+.++. -|...++-+.. +.... ..... ..+..+++.++++ +..+++|++||.+.+|+.
T Consensus 274 ~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~--g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 274 SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQ--GGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred cCCCcceEEEeccccCceeEEEeeecccccccCcccccc--CCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 45 5556666555 56666665542 22111 11111 1144566666665 667999999999999983
No 145
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.83 E-value=2.9e-19 Score=166.39 Aligned_cols=209 Identities=15% Similarity=0.193 Sum_probs=173.0
Q ss_pred EEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceee
Q 009274 256 TGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK 333 (538)
Q Consensus 256 ~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 333 (538)
.|++.. ..++++|+..++|+|||+....+.+.+++|...|+++.|... ..++++++..|.|.|..+.++.....+..
T Consensus 83 ~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~-DeyiAsvs~gGdiiih~~~t~~~tt~f~~ 161 (673)
T KOG4378|consen 83 FCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNT-DEYIASVSDGGDIIIHGTKTKQKTTTFTI 161 (673)
T ss_pred HHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCC-cceeEEeccCCcEEEEecccCccccceec
Confidence 444433 689999999999999999987788889999999999999764 45779999999999999987765555443
Q ss_pred ecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEe-cCCCCCeEEEEEe---CCEEEEEecCCcEEEEE
Q 009274 334 WNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTM-SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd 408 (538)
... .....+.+++..+ +|.+++.+|.|.+||+....++..+ ..|..+...|+|+ +.+|++.+.|..|.+||
T Consensus 162 ~sg----qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD 237 (673)
T KOG4378|consen 162 DSG----QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYD 237 (673)
T ss_pred CCC----CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEee
Confidence 222 2224567788777 7888999999999999888877765 6799999999999 34899999999999999
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe
Q 009274 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL 472 (538)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~ 472 (538)
.+..+....+...++ .+.++|+++|.+|+.|...|.|..||++ .++..+..|...|++++|
T Consensus 238 ~~s~~s~~~l~y~~P---lstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vaf 301 (673)
T KOG4378|consen 238 IRSQASTDRLTYSHP---LSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAF 301 (673)
T ss_pred cccccccceeeecCC---cceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEe
Confidence 998887777765543 3347999999999999999999999965 578888999999999998
No 146
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.83 E-value=3.2e-17 Score=162.09 Aligned_cols=277 Identities=18% Similarity=0.302 Sum_probs=188.7
Q ss_pred EEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 255 VTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 255 V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
|+++.-- =+.++.|+.+|.+.+|++.+++.+.+++++...|+++.-+| --..++.|..+|+|.++++..++....+
T Consensus 162 Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsP-aLDVVaiG~~~G~ViifNlK~dkil~sF 240 (910)
T KOG1539|consen 162 ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSP-ALDVVAIGLENGTVIIFNLKFDKILMSF 240 (910)
T ss_pred eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCC-cceEEEEeccCceEEEEEcccCcEEEEE
Confidence 6666543 56788999999999999999999999999999999999877 4557899999999999999876544333
Q ss_pred eeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEec-------------------------------
Q 009274 332 KKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMS------------------------------- 379 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~------------------------------- 379 (538)
+. . +.....++|.-||+ .+++|+..|.+.+||++..+.+..+.
T Consensus 241 k~---d--~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~ 315 (910)
T KOG1539|consen 241 KQ---D--WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVW 315 (910)
T ss_pred Ec---c--ccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEE
Confidence 32 2 11222345666787 77888888999999997654443332
Q ss_pred ----------------CCCCCeEEEEEe---CCEEEEEecCCcEEEEECCC-----------------------------
Q 009274 380 ----------------GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD----------------------------- 411 (538)
Q Consensus 380 ----------------~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~----------------------------- 411 (538)
||..+-.|+.|. +.++.+++.|++++.+++..
T Consensus 316 vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~ 395 (910)
T KOG1539|consen 316 VFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKL 395 (910)
T ss_pred EeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcC
Confidence 344455555554 22555555555444443321
Q ss_pred ------------------------------------Cce-eEEEecC---CCCceEEEEEEcCCCCEEEEEeCCCcEEEE
Q 009274 412 ------------------------------------HSL-LTVLEED---SSGAVSSVLSLTAVQHTLVVSHESGSIKVW 451 (538)
Q Consensus 412 ------------------------------------~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 451 (538)
... .+.+... .......+++.++.|++.+.|+..|.|.+|
T Consensus 396 p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~f 475 (910)
T KOG1539|consen 396 PPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRF 475 (910)
T ss_pred CcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEE
Confidence 000 0000000 011223446888999999999999999999
Q ss_pred eCCcce--eee---ccccceEEEEEeC--CCEEEEEeCCCeEEEEecCCCeeEeeeecCCcc------------------
Q 009274 452 RNDKFM--KSM---QTHKGSVFAVFLE--GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI------------------ 506 (538)
Q Consensus 452 d~~~~~--~~~---~~h~~~v~~~~~~--~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~------------------ 506 (538)
+....+ ..+ ..|.++|++++.| ++.+++++.+|.+++||..+..+..........
T Consensus 476 NmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~dd 555 (910)
T KOG1539|consen 476 NMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDD 555 (910)
T ss_pred EcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCc
Confidence 976533 344 5799999999885 567999999999999999876533222111100
Q ss_pred ------------------cCCCceEEEEE-eCCE-EEEEECCCeEEEEEcC
Q 009274 507 ------------------PCGSVITALLY-WQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 507 ------------------~~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~~~ 537 (538)
.++..++.+.+ +||+ |++++.|++|++||+-
T Consensus 556 f~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlp 606 (910)
T KOG1539|consen 556 FSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLP 606 (910)
T ss_pred eeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEecc
Confidence 14445565555 5776 8899999999999984
No 147
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=3.1e-18 Score=150.66 Aligned_cols=244 Identities=14% Similarity=0.164 Sum_probs=163.1
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce-eeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKA 366 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~i 366 (538)
.+|.+-|+++.|.+.+ +.+++|+.|++++|||.+........ ..+..+.. ....+...+| -|+.+++++.|+++.|
T Consensus 10 s~h~DlihdVs~D~~G-RRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~-Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYG-RRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDG-SIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred cCCcceeeeeeecccC-ceeeeccCCCcEEEEeccCCCCceEEeeeEEecCC-cEEEEEecCccccceEEEEecCCceee
Confidence 3688999999997754 56699999999999997655444333 33444444 2233333344 5889999999999999
Q ss_pred EECCC---------CceeEEecCCCCCeEEEEEeC----CEEEEEecCCcEEEEECCCCceeE------EEe-----cCC
Q 009274 367 WSLLD---------GTLSCTMSGHKSAVSTLAVCN----GVLYSGSRDGTIRLWSLSDHSLLT------VLE-----EDS 422 (538)
Q Consensus 367 wd~~~---------~~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~iwd~~~~~~~~------~~~-----~~~ 422 (538)
|.-.. .....++....+.|+++.|.+ =.+++++.||.+|||+..+.-.+. .+. ...
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 98621 123456667788999999983 389999999999999876543222 222 001
Q ss_pred CCceEEEEEEcCC---CCEEEEEeCC-----CcEEEEeCCc------ceeeeccccceEEEEEe------CCCEEEEEeC
Q 009274 423 SGAVSSVLSLTAV---QHTLVVSHES-----GSIKVWRNDK------FMKSMQTHKGSVFAVFL------EGKWLFTGGW 482 (538)
Q Consensus 423 ~~~~~~~~~~~~~---~~~l~~~~~d-----g~i~iwd~~~------~~~~~~~h~~~v~~~~~------~~~~l~sgs~ 482 (538)
......++.|++. ..+|++|+.+ +.+.||...+ .+.++.+|..+|+.++| .-..|++++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 1122344677764 4578888766 5889996332 34567789999999987 3358999999
Q ss_pred CCeEEEEecCCCe----------------eEeeeecCCcccCCCceEEEEEe--CCEEEEEECCCeEEEEEc
Q 009274 483 DKTVSVQELAGDE----------------FEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 483 dg~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~v~vw~~ 536 (538)
|| |+||.+.... +........ -.|...+-.+.|+ +..|.+.|.||+||+|+-
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~-~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWka 317 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSEL-DDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKA 317 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeec-cCCCCceEEEEEeeeeeEEeecCCCceeeehhh
Confidence 99 9999987421 111111101 1133344445554 444777999999999975
No 148
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=3.2e-18 Score=170.92 Aligned_cols=260 Identities=16% Similarity=0.163 Sum_probs=203.1
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEEe----------ecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecC
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKDL----------QGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH 291 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~l----------~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h 291 (538)
...+.+.+.+..+++...++.+++|+- .-|...|.+++...++|++|+.+++|.+|...+++.-..+...
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rf 95 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARF 95 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeee
Confidence 345666777889999999999999872 2277889999998889999999999999999988876666667
Q ss_pred CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC
Q 009274 292 DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD 371 (538)
Q Consensus 292 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 371 (538)
+-++.+++|+. ++.+++.|+.|-.|++-+..+......++..... ...+.++|++++|++.+.||.|++||+.+
T Consensus 96 tlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap-----Vl~l~~~p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 96 TLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP-----VLQLSYDPKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred eccceEEEEec-CCcEEEeecCceeEEEEeccccchheeecccCCc-----eeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence 78999999987 5557899999999999998876655555443322 22457778888999999999999999999
Q ss_pred CceeEEecCC--------CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 009274 372 GTLSCTMSGH--------KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (538)
Q Consensus 372 ~~~~~~~~~h--------~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 441 (538)
+.+..++.+- ...+..++|+ ++.++..+.|+.|++|+..+.+....+.........+++.|+|+|.|||+
T Consensus 170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA 249 (933)
T KOG1274|consen 170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA 249 (933)
T ss_pred chhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence 8877766431 3456778999 56999999999999999999999888887665555677899999999999
Q ss_pred EeCCCcEEEEeCCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEE
Q 009274 442 SHESGSIKVWRNDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 442 ~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iw 489 (538)
++.||.|.|||..+... ......|.+++| +.+.+-.-...|...+|
T Consensus 250 s~~~g~I~vWnv~t~~~--~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 250 STLDGQILVWNVDTHER--HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred eccCCcEEEEecccchh--ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 99999999999876222 223457777777 55544444344444333
No 149
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.83 E-value=1.8e-19 Score=162.49 Aligned_cols=159 Identities=23% Similarity=0.420 Sum_probs=131.9
Q ss_pred eecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceE---EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 248 LQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHV---HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 248 l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
+.+|.+.=.+++|+ ...++||..-+.|++|...++.-. ..+.+|+..|..++|+|....+|++|+.||+|+|||
T Consensus 207 ~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWD 286 (440)
T KOG0302|consen 207 FNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWD 286 (440)
T ss_pred ecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEE
Confidence 56788888999999 567899988899999998886543 345679999999999999999999999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecC--CEEEEeeCCCcEEEEECCC---CceeEEecCCCCCeEEEEEe---CC
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLYTGSGDRTIKAWSLLD---GTLSCTMSGHKSAVSTLAVC---NG 393 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~~---~~ 393 (538)
++.+.....+.. ..+. ..+..++++. .+|++|+.||+++|||+++ ++++..++-|..+|++|.|+ ..
T Consensus 287 iRs~~~~~~~~~-kAh~----sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s 361 (440)
T KOG0302|consen 287 IRSGPKKAAVST-KAHN----SDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDS 361 (440)
T ss_pred ecCCCccceeEe-eccC----CceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCc
Confidence 998866555544 2222 2344455544 4899999999999999985 56889999999999999999 55
Q ss_pred EEEEEecCCcEEEEECCC
Q 009274 394 VLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 394 ~l~s~s~dg~i~iwd~~~ 411 (538)
.+++++.|..|.+||+..
T Consensus 362 ~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLSV 379 (440)
T ss_pred eEEeccCCCcEEEEEeec
Confidence 999999999999999963
No 150
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.82 E-value=8.6e-19 Score=163.25 Aligned_cols=256 Identities=13% Similarity=0.206 Sum_probs=184.1
Q ss_pred CCcEEEEeCCCCceEEEEecCC--cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc-eeeecccCCceeeeEEE
Q 009274 271 DKSIHVWSLKDFSHVHTFKGHD--HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHA 347 (538)
Q Consensus 271 dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~ 347 (538)
..++++||+...+....+..|+ ..+.++.|...+.-.+++.+.|..+++|.-.......+ +........ .|++
T Consensus 11 gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~----~Cv~ 86 (673)
T KOG4378|consen 11 GDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNA----FCVA 86 (673)
T ss_pred CCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchH----HHHh
Confidence 3479999997665554444332 34889999765443445556788999997554321111 222111111 1223
Q ss_pred EeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCc
Q 009274 348 LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA 425 (538)
Q Consensus 348 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 425 (538)
......++++|+..+.|+|||++...+.+.+++|.+.|+++.++ +.+|++++..|.|.+..+.++.....+.... +.
T Consensus 87 ~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s-gq 165 (673)
T KOG4378|consen 87 CASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS-GQ 165 (673)
T ss_pred hhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC-CC
Confidence 33334799999999999999999777777889999999999998 6799999999999999999998887777653 44
Q ss_pred eEEEEEEcCCCC-EEEEEeCCCcEEEEeCCc--c-eeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEe
Q 009274 426 VSSVLSLTAVQH-TLVVSHESGSIKVWRNDK--F-MKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 426 ~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~--~-~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~ 498 (538)
....+.+++..+ +|.+++.+|.|.+||... + ..-.+.|..+...++| +..+|++.+.|+.|.+||....+...
T Consensus 166 svRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred eEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 445578888765 466788999999999543 3 3344679998887776 78899999999999999998766443
Q ss_pred eeecCCcccCCCceEE-EEEeCCE-EEEEECCCeEEEEEcC
Q 009274 499 DVIPTGAIPCGSVITA-LLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 499 ~~~~~~~~~~~~~~~~-~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
.+... .+.+. .+.++|. |++|...|.|..||+.
T Consensus 246 ~l~y~------~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 246 RLTYS------HPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred eeeec------CCcceeeecCCceEEEeecCCceEEEEecc
Confidence 33322 23344 4455666 6678999999999974
No 151
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.82 E-value=3.4e-18 Score=165.61 Aligned_cols=304 Identities=18% Similarity=0.197 Sum_probs=205.3
Q ss_pred cCcceeEEeecCCeEEEEEeecCCCcEEEEEEc-----CCEEEEEeCCCcEEEEeCCCC--ceEEEEecCCcCeEEEEEe
Q 009274 229 GGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDF--SHVHTFKGHDHKVMAVVYV 301 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~l~~h~~~V~~l~~~-----~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~ 301 (538)
+-+..++...+...+...++.||.++|+|+.+- ..++++|+.|+.|++|.++.. ..+.++++|...+.|+.-.
T Consensus 31 Ga~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~ 110 (764)
T KOG1063|consen 31 GAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVAR 110 (764)
T ss_pred cCCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEee
Confidence 444556666666667788899999999999996 237999999999999999743 3456677777666666432
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC--EEEEeeCCCcEEEEECCCC--ceeEE
Q 009274 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR--YLYTGSGDRTIKAWSLLDG--TLSCT 377 (538)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~~dg~i~iwd~~~~--~~~~~ 377 (538)
.....+...|+++.+||.+..+ ................-+.+..++.+ .++.|+.+..|.++.-.+. +.+..
T Consensus 111 ---~~~~~~~~ad~~v~vw~~~~~e-~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~e 186 (764)
T KOG1063|consen 111 ---SSVMTCKAADGTVSVWDKQQDE-VFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAE 186 (764)
T ss_pred ---eeEEEeeccCceEEEeecCCCc-eeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEE
Confidence 2222233789999999984332 11222222222222233444555433 5677777888888875533 56778
Q ss_pred ecCCCCCeEEEEEe---C-C-EEEEEecCCcEEEEECCCCc---------------------eeEE---------EecCC
Q 009274 378 MSGHKSAVSTLAVC---N-G-VLYSGSRDGTIRLWSLSDHS---------------------LLTV---------LEEDS 422 (538)
Q Consensus 378 ~~~h~~~v~~l~~~---~-~-~l~s~s~dg~i~iwd~~~~~---------------------~~~~---------~~~~~ 422 (538)
+.||.+.|.+++|. + . +|+++|.|..||+|.+.-+. .... +...|
T Consensus 187 l~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GH 266 (764)
T KOG1063|consen 187 LEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGH 266 (764)
T ss_pred eeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCc
Confidence 89999999999998 2 2 89999999999999875322 0101 11234
Q ss_pred CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-----------------------------------------------
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----------------------------------------------- 455 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------------------------------------------- 455 (538)
...+.+ +.|+|.+..|++++.|.++.+|...+
T Consensus 267 eDWV~s-v~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt 345 (764)
T KOG1063|consen 267 EDWVYS-VWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKT 345 (764)
T ss_pred ccceEE-EEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEec
Confidence 455555 58889888888999999988885220
Q ss_pred -------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEE
Q 009274 456 -------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVG 525 (538)
Q Consensus 456 -------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg 525 (538)
....+.+|...|..+.| .|.+|++.|.|.+-|+|-.-+.+..........++.....+..+.+ +-++++|
T Consensus 346 ~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSg 425 (764)
T KOG1063|consen 346 KDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSG 425 (764)
T ss_pred cCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeec
Confidence 11123568888999988 4999999999999999877644433333333344444444444455 6678899
Q ss_pred ECCCeEEEEEcC
Q 009274 526 CADRTVKVYYYG 537 (538)
Q Consensus 526 ~~dg~v~vw~~~ 537 (538)
.+...+|+|+..
T Consensus 426 AdEKVlRvF~aP 437 (764)
T KOG1063|consen 426 ADEKVLRVFEAP 437 (764)
T ss_pred ccceeeeeecCc
Confidence 999999999853
No 152
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.82 E-value=5.2e-17 Score=156.19 Aligned_cols=248 Identities=13% Similarity=0.111 Sum_probs=171.7
Q ss_pred EEEEeecCCCcEEEEEEc--CCEE-EEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
.+..+.+|.. +.+++|+ ++.+ ++++.|+.|++||..+++....+..+.. +..++|+|+++.++++++.|+.+++|
T Consensus 23 ~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~ 100 (300)
T TIGR03866 23 VTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVI 100 (300)
T ss_pred eEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEE
Confidence 3445555544 6778998 6665 6677899999999999988877765544 46788999877676777789999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC-cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEE-
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLY- 396 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~- 396 (538)
|+.+......+ .... .....+++++++.+++++.++ .+.+||.++++....+.. .....+++|+ +.+++
T Consensus 101 d~~~~~~~~~~---~~~~---~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~ 173 (300)
T TIGR03866 101 DIETRKVLAEI---PVGV---EPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWV 173 (300)
T ss_pred ECCCCeEEeEe---eCCC---CcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEE
Confidence 99864332222 1111 112357889999999888765 567889988877665542 2345678888 44564
Q ss_pred EEecCCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEE-eCCCcEEEEeCCc--ceeeeccccceEE
Q 009274 397 SGSRDGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDK--FMKSMQTHKGSVF 468 (538)
Q Consensus 397 s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~--~~~~~~~h~~~v~ 468 (538)
++..++.|++||+++++.+..+..... ......+.++|++++++++ +.++.+.+||..+ ....+ .+...+.
T Consensus 174 ~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~~ 252 (300)
T TIGR03866 174 SSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYL-LVGQRVW 252 (300)
T ss_pred EcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE-EeCCCcc
Confidence 445699999999999987766643211 1111235789999986554 5567899999654 22222 2334566
Q ss_pred EEEe--CCCEEEEE-eCCCeEEEEecCCCeeEeeee
Q 009274 469 AVFL--EGKWLFTG-GWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 469 ~~~~--~~~~l~sg-s~dg~v~iwd~~~~~~~~~~~ 501 (538)
++++ ++++|+++ +.+|.|++||+.+++......
T Consensus 253 ~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~ 288 (300)
T TIGR03866 253 QLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK 288 (300)
T ss_pred eEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 6665 88888876 468999999999988765554
No 153
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=6.4e-18 Score=149.09 Aligned_cols=268 Identities=9% Similarity=0.128 Sum_probs=184.5
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (538)
-.|+.|+ |.+||.|..||.|.|||+.+...-+.+.+|..+|.+++|++++ +.|++++.|..|.+||+..+.....+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCC-CEeeeecCCceeEEEeccCCCceeEEE
Confidence 6789999 9999999999999999999999989999999999999999954 577999999999999999887555444
Q ss_pred eecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEec--CCCC----CeEEEEEe--CCEEEEEecCCc
Q 009274 333 KWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMS--GHKS----AVSTLAVC--NGVLYSGSRDGT 403 (538)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~----~v~~l~~~--~~~l~s~s~dg~ 403 (538)
.... .....++|..+ ..++.-.+..-.+-++..+ ++.+- ...+ .-.+..|. ++++++|...|.
T Consensus 105 f~sp------v~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk 176 (405)
T KOG1273|consen 105 FDSP------VWGAQWHPRKRNKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK 176 (405)
T ss_pred ccCc------cceeeeccccCCeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcce
Confidence 3211 11234555433 4444434444555555432 22221 1111 11223455 779999999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce-----------eeecc--ccceEEEE
Q 009274 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM-----------KSMQT--HKGSVFAV 470 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~--h~~~v~~~ 470 (538)
+.++|..+.+++..++......+.. +-++..|+.|+.-+.|+.||.|+..... ++++. ....-.++
T Consensus 177 llv~~a~t~e~vas~rits~~~IK~-I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~c 255 (405)
T KOG1273|consen 177 LLVYDAETLECVASFRITSVQAIKQ-IIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKC 255 (405)
T ss_pred EEEEecchheeeeeeeechheeeeE-EEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhe
Confidence 9999999999998887664333333 6889999999999999999999855321 11111 11122344
Q ss_pred Ee--CCCEEEEEeC-CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEc
Q 009274 471 FL--EGKWLFTGGW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 471 ~~--~~~~l~sgs~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~ 536 (538)
+| +|.+++.++. -..++||.-..+.+...+.... +.....+.|..-+ ++..-..|.|++|..
T Consensus 256 cfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k----gE~l~DV~whp~rp~i~si~sg~v~iw~~ 321 (405)
T KOG1273|consen 256 CFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK----GEELLDVNWHPVRPIIASIASGVVYIWAV 321 (405)
T ss_pred eecCCccEEEeccccceeEEEEecCCcceeeeecCCc----hhheeecccccceeeeeeccCCceEEEEe
Confidence 44 8888888775 3679999999998776554332 2223334444333 444448899999975
No 154
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.82 E-value=4.5e-19 Score=165.30 Aligned_cols=237 Identities=20% Similarity=0.325 Sum_probs=180.3
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
.|..-|.++..+. ..+.+++|+. |.|+|||+.......++..+.......+...+.+.+||+.|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~-~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISN-PTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecC-CcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 4777788888876 4556677775 8999999998776666666555544456667789999999999999999999999
Q ss_pred CCCce--eEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 370 LDGTL--SCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 370 ~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
....+ ...+....-..++++.+ .+..++|+.||.|.|||+.+...++.++++..+.. ++.+++||..|.+|+-|
T Consensus 495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGas--cIdis~dGtklWTGGlD 572 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS--CIDISKDGTKLWTGGLD 572 (705)
T ss_pred cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCce--eEEecCCCceeecCCCc
Confidence 76543 33343333456677777 45889999999999999999999999999876543 37999999999999999
Q ss_pred CcEEEEeCCcceeeecc-ccceEEEE--EeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEE-EEe-CC
Q 009274 446 GSIKVWRNDKFMKSMQT-HKGSVFAV--FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYW-QG 520 (538)
Q Consensus 446 g~i~iwd~~~~~~~~~~-h~~~v~~~--~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 520 (538)
++||.||+++..+..+. ..+.|.++ ++++.+|+.|-.++.+-+......+....-. +.+.+..+ |.. +.
T Consensus 573 ntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhl------heScVLSlKFa~cGk 646 (705)
T KOG0639|consen 573 NTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHL------HESCVLSLKFAYCGK 646 (705)
T ss_pred cceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecc------cccEEEEEEecccCc
Confidence 99999998764433322 34567777 4599999999999999999887766443333 23344444 444 44
Q ss_pred EEEEEECCCeEEEEEc
Q 009274 521 KLFVGCADRTVKVYYY 536 (538)
Q Consensus 521 ~l~sg~~dg~v~vw~~ 536 (538)
.+++.+.|..+..|+.
T Consensus 647 wfvStGkDnlLnawrt 662 (705)
T KOG0639|consen 647 WFVSTGKDNLLNAWRT 662 (705)
T ss_pred eeeecCchhhhhhccC
Confidence 5888999999999975
No 155
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=2.6e-17 Score=140.13 Aligned_cols=234 Identities=21% Similarity=0.289 Sum_probs=168.6
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCC----------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKD----------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
|.+-+++ +++|+.|+.+|.|-+..+++ ...+...++|.++|+.++|. ..++++|+. |.|+-|.+
T Consensus 13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~---d~~Lls~gd-G~V~gw~W 88 (325)
T KOG0649|consen 13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH---DDFLLSGGD-GLVYGWEW 88 (325)
T ss_pred HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee---hhheeeccC-ceEEEeee
Confidence 3334455 88999999999999998753 23455668999999999997 335566654 99999988
Q ss_pred cCCCCCc-ceeeecc-------cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 009274 323 SFPLGHE-PLKKWNE-------EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 323 ~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (538)
+...... .-..+.. .........+.+.|..+-++.++.|+.++-||+++|+...++++|++.|.++.-. +
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~ 168 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN 168 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence 7543311 1111111 1111222344666777777777799999999999999999999999999999984 6
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCC------ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecccc
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG------AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHK 464 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~ 464 (538)
..+++|+.||++|+||.++++.+..+...... ....+.+..-+..++++|+. ..+.+|.++. +...+. -.
T Consensus 169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgG-p~lslwhLrsse~t~vfp-ip 246 (325)
T KOG0649|consen 169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGG-PKLSLWHLRSSESTCVFP-IP 246 (325)
T ss_pred cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecCC-CceeEEeccCCCceEEEe-cc
Confidence 79999999999999999999998887543211 11223456667778887754 5799999664 333332 23
Q ss_pred ceEEEEEeCCCEEEEEeCCCeEEEEecCCC
Q 009274 465 GSVFAVFLEGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 465 ~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
.++..+.|+.+.+++++..+.|.-|.+.+-
T Consensus 247 a~v~~v~F~~d~vl~~G~g~~v~~~~l~Gv 276 (325)
T KOG0649|consen 247 ARVHLVDFVDDCVLIGGEGNHVQSYTLNGV 276 (325)
T ss_pred cceeEeeeecceEEEeccccceeeeeeccE
Confidence 556777888899999999899999988753
No 156
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.81 E-value=1.1e-18 Score=150.25 Aligned_cols=244 Identities=17% Similarity=0.258 Sum_probs=181.2
Q ss_pred EEEEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
+++.|++|.+.|+|+.|. +++|++|..-|.|++|++++.+....++ .|...|+.+.-.|++ -+.+-+.|+.+.+|+
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d--~l~tqgRd~~L~lw~ 83 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPND--SLDTQGRDPLLILWT 83 (323)
T ss_pred CeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCc--chhhcCCCceEEEEE
Confidence 356678999999999999 8889999999999999999998888888 577889999888753 457889999999998
Q ss_pred ccCCC------------------------CCcceeee----------------------cccCCceeeeEEEEeec---C
Q 009274 322 FSFPL------------------------GHEPLKKW----------------------NEEKDWRYSGIHALTTS---G 352 (538)
Q Consensus 322 ~~~~~------------------------~~~~~~~~----------------------~~~~~~~~~~~~~~~~~---~ 352 (538)
+.... ....+... ..........++++..+ +
T Consensus 84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~ 163 (323)
T KOG0322|consen 84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG 163 (323)
T ss_pred ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence 76410 00000000 00000111223344422 2
Q ss_pred C--EEEEeeCCCcEEEEECCCCc----------eeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC--ce--
Q 009274 353 R--YLYTGSGDRTIKAWSLLDGT----------LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH--SL-- 414 (538)
Q Consensus 353 ~--~l~sg~~dg~i~iwd~~~~~----------~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~-- 414 (538)
. ++++|.++|.+.+||+.++. .+.....|..+|.++.+. -+.=++|+.+..+..|++... .+
T Consensus 164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence 2 67888899999999999873 333445689999999997 335578888888999988643 22
Q ss_pred eEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 415 LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
...+...+++. .. +.+-||++.+++++.|+.||+|. ..+++..++.|...|++++| +...++.+|.|++|.+|+
T Consensus 244 ~~e~~lknpGv-~g-vrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 244 RKEITLKNPGV-SG-VRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred cceEEecCCCc-cc-eEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeee
Confidence 12222222332 22 58899999999999999999988 45688899999999999998 668999999999999998
Q ss_pred c
Q 009274 491 L 491 (538)
Q Consensus 491 ~ 491 (538)
+
T Consensus 322 L 322 (323)
T KOG0322|consen 322 L 322 (323)
T ss_pred c
Confidence 6
No 157
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=3.6e-19 Score=181.95 Aligned_cols=260 Identities=18% Similarity=0.275 Sum_probs=192.0
Q ss_pred eCCCcEEEEeCC--CCc----eEEEEecCCcCeEEEEEecCCCC---EEEEEcCCCcEEEEEccC---CCCCcceeeecc
Q 009274 269 SFDKSIHVWSLK--DFS----HVHTFKGHDHKVMAVVYVDEDQP---LCISGDSGGGIFVWSFSF---PLGHEPLKKWNE 336 (538)
Q Consensus 269 s~dg~i~iwd~~--~~~----~~~~~~~h~~~v~~l~~~~~~~~---~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~ 336 (538)
+.+.++-||.+. +.+ .+..+. .....+.++|.+.+.. +++.|..||.|.+||... +.....+.....
T Consensus 36 st~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~ 114 (1049)
T KOG0307|consen 36 STSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSK 114 (1049)
T ss_pred ccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcc
Confidence 445566666553 222 223332 3456789999876665 689999999999999876 333344444444
Q ss_pred cCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe---CCEEEEEecCCcEEEEECC
Q 009274 337 EKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 337 ~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~ 410 (538)
|.+ .+.. +.|.+. ++.|++|+.||.|.|||++..+.-.+.. ...+.|.+++|+ ...|++++.+|.+.|||++
T Consensus 115 h~G-~V~g-LDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 115 HTG-PVLG-LDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR 192 (1049)
T ss_pred cCC-ceee-eeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc
Confidence 444 2222 456664 4599999999999999998755444442 245789999999 4589999999999999999
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCC-CEEEEEeCC---CcEEEEeCC---cceeeeccccceEEEEEe---CCCEEEEE
Q 009274 411 DHSLLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHES---GSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWLFTG 480 (538)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d---g~i~iwd~~---~~~~~~~~h~~~v~~~~~---~~~~l~sg 480 (538)
..+.+-.+..+......+.+.|+|+. ..+++++.| -.|.+||++ .+.+.+++|+..|.+++| |..+|+++
T Consensus 193 ~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSs 272 (1049)
T KOG0307|consen 193 KKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSS 272 (1049)
T ss_pred CCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcc
Confidence 99888777766554546668999986 456666655 368999965 578889999999999998 77899999
Q ss_pred eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe---CCEEEEEECCCeEEEEEc
Q 009274 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW---QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~v~vw~~ 536 (538)
+.|+.|.+|+.++++....+.. .+..+..+.|. .+.+++++.||.|.|+.+
T Consensus 273 gkD~~ii~wN~~tgEvl~~~p~-----~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl 326 (1049)
T KOG0307|consen 273 GKDNRIICWNPNTGEVLGELPA-----QGNWCFDVQWCPRNPSVMAAASFDGKISIYSL 326 (1049)
T ss_pred cCCCCeeEecCCCceEeeecCC-----CCcceeeeeecCCCcchhhhheeccceeeeee
Confidence 9999999999999987665544 33456666664 446778999999999986
No 158
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.80 E-value=6.9e-19 Score=179.94 Aligned_cols=236 Identities=23% Similarity=0.307 Sum_probs=183.0
Q ss_pred CcEEEEEEc--C----CEEEEEeCCCcEEEEeCCC------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 253 DCVTGLAVG--G----GFLFSSSFDKSIHVWSLKD------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 253 ~~V~~l~~~--~----~~l~s~s~dg~i~iwd~~~------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
..-+.++|. + ..|+.|..||.|.+||... ...+.++..|++.|..+.|++..++++++|+.||.|.||
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW 144 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW 144 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence 345667776 3 3599999999999999864 234566788999999999999999999999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCC---EEEEeeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEeCC--
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR---YLYTGSGDRTIKAWSLLDGTLSCTMSGHKS--AVSTLAVCNG-- 393 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~-- 393 (538)
|+........... ......+.+++++.+ .|++++.+|.+.|||++..+++..+..|.+ .+..++|+++
T Consensus 145 Dlnn~~tP~~~~~-----~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~a 219 (1049)
T KOG0307|consen 145 DLNKPETPFTPGS-----QAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHA 219 (1049)
T ss_pred ccCCcCCCCCCCC-----CCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCc
Confidence 9986543332221 112334667777654 899999999999999999988888766554 5778999933
Q ss_pred -EEEEEecCC---cEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCC-CEEEEEeCCCcEEEEeCC--cceeeeccccc
Q 009274 394 -VLYSGSRDG---TIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRND--KFMKSMQTHKG 465 (538)
Q Consensus 394 -~l~s~s~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~ 465 (538)
.+++++.|. .|.+||+|.-. +++.+..|..+... +.|++.+ +++++++.|+.|.+|+.+ +.+..+.....
T Consensus 220 Tql~~As~dd~~PviqlWDlR~assP~k~~~~H~~Gils--lsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~n 297 (1049)
T KOG0307|consen 220 TQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILS--LSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGN 297 (1049)
T ss_pred eeeeeecCCCCCceeEeecccccCCchhhhcccccceee--eccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCc
Confidence 677776654 49999998754 56667666555443 5666654 899999999999999955 47778888888
Q ss_pred eEEEEEe---CCCEEEEEeCCCeEEEEecCCCe
Q 009274 466 SVFAVFL---EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 466 ~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
++..+.| +...++.++-||.|-|+.+.+..
T Consensus 298 W~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 298 WCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred ceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 9999988 66689999999999999987654
No 159
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.79 E-value=7.6e-18 Score=152.93 Aligned_cols=200 Identities=18% Similarity=0.263 Sum_probs=154.0
Q ss_pred eecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcE
Q 009274 248 LQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (538)
Q Consensus 248 l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 317 (538)
+.||+++|..++|+ +..|||||.|.+|.||++..+ +++..+.+|...|.-++|+|...+.|++++.|.+|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 67999999999998 889999999999999998643 55788999999999999999999999999999999
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCC--eEEEEEeCCEE
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSA--VSTLAVCNGVL 395 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~l~~~~~~l 395 (538)
.+||+.++.....+. |. .....++|+.+|.++++.+.|..|+|||.++++.+..-.+|.+. ...+-..++.+
T Consensus 157 ~iWnv~tgeali~l~----hp--d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i 230 (472)
T KOG0303|consen 157 SIWNVGTGEALITLD----HP--DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKI 230 (472)
T ss_pred EEEeccCCceeeecC----CC--CeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCce
Confidence 999999886554433 22 23335678889999999999999999999999999988888763 33443334446
Q ss_pred EEEe----cCCcEEEEECCCCceeEEE-ecCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q 009274 396 YSGS----RDGTIRLWSLSDHSLLTVL-EEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRND 454 (538)
Q Consensus 396 ~s~s----~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 454 (538)
++.+ .+..+-+||..+.+....+ .......+. .-.+.++.++++.+ -.|+.|+.|...
T Consensus 231 ~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl-~PFyD~dt~ivYl~GKGD~~IRYyEit 294 (472)
T KOG0303|consen 231 FTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVL-LPFYDPDTSIVYLCGKGDSSIRYFEIT 294 (472)
T ss_pred eeeccccccccceeccCcccccCcceeEEeccCCceE-EeeecCCCCEEEEEecCCcceEEEEec
Confidence 6554 4778999998775432222 222222222 23677888877655 479999999843
No 160
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.78 E-value=1.5e-16 Score=139.05 Aligned_cols=289 Identities=16% Similarity=0.178 Sum_probs=190.0
Q ss_pred EEEEEeecCCCcEEEEEEc-----CCEEEEEeC----CCcEEEEeCC--CCceEEEE-ecCCcCeEEEEEecCCC----C
Q 009274 243 VKFKDLQGHRDCVTGLAVG-----GGFLFSSSF----DKSIHVWSLK--DFSHVHTF-KGHDHKVMAVVYVDEDQ----P 306 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~-----~~~l~s~s~----dg~i~iwd~~--~~~~~~~~-~~h~~~v~~l~~~~~~~----~ 306 (538)
..+..+..+ -++.++.|+ +.+|+.||. .+.|.|-.+. +++.+..- ..|..+++.+.|.|+.. .
T Consensus 36 ~eiy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pd 114 (364)
T KOG0290|consen 36 KEIYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPD 114 (364)
T ss_pred ceEEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcc
Confidence 345556655 357788887 667888875 3566665543 44443322 25889999999998653 4
Q ss_pred EEEEEcCCCcEEEEEccCCCCCccee-eecc-cCCceeeeEEEEee---cCCEEEEeeCCCcEEEEECCCCc---eeEEe
Q 009274 307 LCISGDSGGGIFVWSFSFPLGHEPLK-KWNE-EKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDGT---LSCTM 378 (538)
Q Consensus 307 ~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~iwd~~~~~---~~~~~ 378 (538)
+|++++ ..+++|.+.......... .... .......++.+|.+ +.+++.+.+-|.+..|||+.++. ....+
T Consensus 115 lLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL 192 (364)
T KOG0290|consen 115 LLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL 192 (364)
T ss_pred hhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE
Confidence 555554 689999987533221111 1111 12223345667766 46799999999999999999863 36677
Q ss_pred cCCCCCeEEEEEeC---CEEEEEecCCcEEEEECCCCceeEEEecCCC-CceEEEEEEcC-CCCEEEEEeC-CCcEEEEe
Q 009274 379 SGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS-GAVSSVLSLTA-VQHTLVVSHE-SGSIKVWR 452 (538)
Q Consensus 379 ~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~-dg~i~iwd 452 (538)
-.|..+|..++|.. +.+++.+.||.+|+||+|..+.-..+..... ......++|++ |-+++++-.. ...|.+.|
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLD 272 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILD 272 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEE
Confidence 89999999999992 4999999999999999998776554443222 22222356655 4467776544 45788899
Q ss_pred CC---cceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeC--CEEEE
Q 009274 453 ND---KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFV 524 (538)
Q Consensus 453 ~~---~~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~s 524 (538)
++ .++..+++|++.|++++| ....|+|+|.|..+.+||+..........+......+.-+.-+.|.. .--++
T Consensus 273 iR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwia 352 (364)
T KOG0290|consen 273 IRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIA 352 (364)
T ss_pred ecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEE
Confidence 66 478889999999999998 78899999999999999997643211111111112333455555542 22444
Q ss_pred EECCCeEEEE
Q 009274 525 GCADRTVKVY 534 (538)
Q Consensus 525 g~~dg~v~vw 534 (538)
...++++.+-
T Consensus 353 i~~~kkleiL 362 (364)
T KOG0290|consen 353 ICFGKKLEIL 362 (364)
T ss_pred EEecCeeeEE
Confidence 4444455543
No 161
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.76 E-value=2.4e-16 Score=139.73 Aligned_cols=236 Identities=19% Similarity=0.295 Sum_probs=179.3
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCC-----C-------ceEEEEe-cCCcCeEEEEEec------CCCCEEEEEcC
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKD-----F-------SHVHTFK-GHDHKVMAVVYVD------EDQPLCISGDS 313 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~-----~-------~~~~~~~-~h~~~v~~l~~~~------~~~~~l~s~~~ 313 (538)
...+.|+ |..|++-+.|..+++|++.. + +...+++ .....|...+|.+ .+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 4467888 99999999999999998742 1 0111111 1345677777762 35678899999
Q ss_pred CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC-CCCce--eEEe-----cCCCCCe
Q 009274 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL-LDGTL--SCTM-----SGHKSAV 385 (538)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~-~~~~~--~~~~-----~~h~~~v 385 (538)
+.-|++||.-+++.................-.++|++||.+|++|. ...|+++|+ +.|.- +... .+..+-+
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 9999999999988877777666655555556789999999999875 478999999 55542 2221 2336778
Q ss_pred EEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeC-CCcEEEEeCCc---cee
Q 009274 386 STLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK---FMK 458 (538)
Q Consensus 386 ~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~---~~~ 458 (538)
.|++|+ .+.++.|+...++-|+.-..+.++..+.++. +.++. +.|.++|+.|++|.. |-.|..||++. ++.
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~-gGvTh-L~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~ 288 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHG-GGVTH-LQWCEDGNKLFSGARKDDKILCWDIRYSRDPVY 288 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccC-CCeee-EEeccCcCeecccccCCCeEEEEeehhccchhh
Confidence 899999 4589999999999999988888888887664 44443 799999999999875 77899999764 566
Q ss_pred eeccccc-eE----EEEEeCCCEEEEEeCCCeEEEEecCC
Q 009274 459 SMQTHKG-SV----FAVFLEGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 459 ~~~~h~~-~v----~~~~~~~~~l~sgs~dg~v~iwd~~~ 493 (538)
.+..|.+ .- ..+.+++++|++|+.||.|++||+.+
T Consensus 289 ~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 289 ALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred hhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 6677765 22 34556899999999999999999987
No 162
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.75 E-value=1.4e-16 Score=147.46 Aligned_cols=255 Identities=18% Similarity=0.234 Sum_probs=173.2
Q ss_pred EeCCCCceEEEEecCCcCeEEEEEecCCC-CEEEEEcCCCcEEEEEccCCC-CCcceeeecccCCceeeeEEEEee-cCC
Q 009274 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQ-PLCISGDSGGGIFVWSFSFPL-GHEPLKKWNEEKDWRYSGIHALTT-SGR 353 (538)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (538)
+|+.+.......+.+.++|++++|+|..+ .++++|+.-|.|-+||+.+.. ....+..+..+.. .+. .+.|+| +..
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~-~Vs-~l~F~P~n~s 248 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSG-PVS-GLKFSPANTS 248 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCc-ccc-ceEecCCChh
Confidence 45555566677788999999999999877 899999999999999996332 2333344443332 233 335555 455
Q ss_pred EEEEeeCCCcEEEEECCCCce--eEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCce-eEEEecCCCCceEE
Q 009274 354 YLYTGSGDRTIKAWSLLDGTL--SCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL-LTVLEEDSSGAVSS 428 (538)
Q Consensus 354 ~l~sg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~ 428 (538)
.+++.|.||+|++-|++.+.. +..+......+.++.|+ +..++.+..=|...+||++++.. ...+..|.. .+..
T Consensus 249 ~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k-KI~s 327 (498)
T KOG4328|consen 249 QIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK-KITS 327 (498)
T ss_pred heeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc-ccce
Confidence 999999999999999987643 33333345566777777 45777777777999999998765 444554433 4444
Q ss_pred EEEEcCC-CCEEEEEeCCCcEEEEeCCcce------eeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC----CCe
Q 009274 429 VLSLTAV-QHTLVVSHESGSIKVWRNDKFM------KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA----GDE 495 (538)
Q Consensus 429 ~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~----~~~ 495 (538)
++++|. ..+|++++.|++.+|||+++.. -....|...|.+..| .+..|+|.+.|..|+|||.. ...
T Consensus 328 -v~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~ 406 (498)
T KOG4328|consen 328 -VALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDE 406 (498)
T ss_pred -eecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCC
Confidence 688875 4678999999999999976532 333468889988876 55569999999999999984 333
Q ss_pred eEeeeecCCcc-cCCCceEEEEEeCC-EEEEEECCCeEEEEE
Q 009274 496 FEEDVIPTGAI-PCGSVITALLYWQG-KLFVGCADRTVKVYY 535 (538)
Q Consensus 496 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~ 535 (538)
......|.... ..-....+++-++. .+++|-.-..|-|+|
T Consensus 407 p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~ 448 (498)
T KOG4328|consen 407 PLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFD 448 (498)
T ss_pred ccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEc
Confidence 33333332221 12233444454543 455676666677765
No 163
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=5.6e-16 Score=156.90 Aligned_cols=287 Identities=18% Similarity=0.278 Sum_probs=194.1
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecC---CcCeEEEEEec-CCCCEEEEEcCCCcEEEEEcc
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGH---DHKVMAVVYVD-EDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~ 323 (538)
+...+-..+.|+ ...++++...-.|++||.+.++.+..|..+ ...|+.+.+.+ ++..++++|+.||.|+||+--
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDY 1141 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccc
Confidence 333445566777 778888887779999999999998887654 35788888875 456688999999999999744
Q ss_pred CC--CCCcceeeecccCCc-----eeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEe---C
Q 009274 324 FP--LGHEPLKKWNEEKDW-----RYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVC---N 392 (538)
Q Consensus 324 ~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~---~ 392 (538)
.. +..+.+..+..-.+. ....+..|.....+|++++.-..|+|||......+..+. +....|+++.-+ +
T Consensus 1142 ~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~g 1221 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHG 1221 (1387)
T ss_pred ccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCC
Confidence 33 233333333322211 112344555455577777778999999998877777764 345567777766 6
Q ss_pred CEEEEEecCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCCC-EEEEEeCCCcEEEEeCCc-cee---eecccc
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK-FMK---SMQTHK 464 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~-~~~---~~~~h~ 464 (538)
+.+++|..||.|++||.+.... +...+.|.......-+.+.++|- .|++|+.||.|++||++. ... .+..|.
T Consensus 1222 n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~ 1301 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHW 1301 (1387)
T ss_pred ceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecc
Confidence 7999999999999999987543 44555443331122256666554 499999999999999765 221 222232
Q ss_pred --c-eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCccc-CCCceEEEEEeCCE--EEEEECCCeEEEEEc
Q 009274 465 --G-SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIP-CGSVITALLYWQGK--LFVGCADRTVKVYYY 536 (538)
Q Consensus 465 --~-~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--l~sg~~dg~v~vw~~ 536 (538)
+ ..+++.. +...+++|+. +.|+||++.+..+.......+... ......++.++.-+ +++|+.|..|.||..
T Consensus 1302 ~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1302 EYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred ccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence 3 3666655 7889999998 999999998876544333322211 11233555555443 677999999999975
Q ss_pred C
Q 009274 537 G 537 (538)
Q Consensus 537 ~ 537 (538)
.
T Consensus 1381 ~ 1381 (1387)
T KOG1517|consen 1381 E 1381 (1387)
T ss_pred C
Confidence 4
No 164
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.74 E-value=1.8e-16 Score=144.16 Aligned_cols=205 Identities=15% Similarity=0.269 Sum_probs=153.6
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC----cceeeecccCCceeeeEEEEeec-CCEEEEeeCC
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGD 361 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~d 361 (538)
.+.+|+++|..++|+|.+...+++|+.|.+|.||++-..... .++..+..|. ....++.++|. .+.|++++.|
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--RRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecc--eeEEEEeecccchhhHhhccCC
Confidence 456899999999999999999999999999999998754432 2333444443 33445677775 4589999999
Q ss_pred CcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE
Q 009274 362 RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL 439 (538)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 439 (538)
.+|.+||+.+++.+.++. |.+.|+++.|+ ++++++.+.|..|+|||.++++.+..-..|. +......-|-.++..+
T Consensus 154 n~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he-G~k~~Raifl~~g~i~ 231 (472)
T KOG0303|consen 154 NTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE-GAKPARAIFLASGKIF 231 (472)
T ss_pred ceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc-CCCcceeEEeccCcee
Confidence 999999999999988888 99999999999 6699999999999999999999998875553 3333334667778755
Q ss_pred EEEe---CCCcEEEEeCCc---c--eeeeccccceEEEE-EeCCCEEEEE-eCCCeEEEEecCCCe
Q 009274 440 VVSH---ESGSIKVWRNDK---F--MKSMQTHKGSVFAV-FLEGKWLFTG-GWDKTVSVQELAGDE 495 (538)
Q Consensus 440 ~~~~---~dg~i~iwd~~~---~--~~~~~~h~~~v~~~-~~~~~~l~sg-s~dg~v~iwd~~~~~ 495 (538)
-+|. .+..+-+||..+ + ...+....+-+.-+ ..|.+.++.+ -.|+.||-|.+....
T Consensus 232 tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 232 TTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred eeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 5553 478899998543 2 23344333333322 2255665554 469999999998766
No 165
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.74 E-value=3.1e-14 Score=143.47 Aligned_cols=281 Identities=28% Similarity=0.490 Sum_probs=205.6
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-eEEEEecCCc-CeEEEEE-ecCCCCEEEEEc-CCCcEEEE
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTFKGHDH-KVMAVVY-VDEDQPLCISGD-SGGGIFVW 320 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~-~v~~l~~-~~~~~~~l~s~~-~dg~i~vw 320 (538)
.+..|...+.++.+. +..++.++.|+.+.+|+...+. ....+..+.. .+..+.+ .++...+++..+ .|+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 467899999999998 8888888899999999998876 6777776443 7777777 665553455544 49999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC-EEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG-VLY 396 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~ 396 (538)
+.... .........+.. .....++++++..+++++. |+.+++|++..+..+..+.+|...|.+++|+ +. .++
T Consensus 140 ~~~~~--~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 215 (466)
T COG2319 140 DLSTP--GKLIRTLEGHSE--SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA 215 (466)
T ss_pred EecCC--CeEEEEEecCcc--cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence 99851 112222222222 1225688899988888885 9999999999988999999999999999999 33 455
Q ss_pred EEecCCcEEEEECCCCceeE-EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc---eeeeccccceEEEEEe
Q 009274 397 SGSRDGTIRLWSLSDHSLLT-VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF---MKSMQTHKGSVFAVFL 472 (538)
Q Consensus 397 s~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~h~~~v~~~~~ 472 (538)
+++.|+.|++||...+.... .+..+.... . ..+++++..+++++.|+.+++|+.... ...+..|...+.++.+
T Consensus 216 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 292 (466)
T COG2319 216 SGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-V--SSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAF 292 (466)
T ss_pred EecCCCcEEEEECCCCcEEeeecCCCCcce-e--EeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEE
Confidence 55999999999999777777 455554332 2 279999989999999999999996532 3344678888988877
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-C-CEEEEE-ECCCeEEEEEcC
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-Q-GKLFVG-CADRTVKVYYYG 537 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~sg-~~dg~v~vw~~~ 537 (538)
++..+++++.|+.+++||........... ...+...+..+.+. + ..++.+ ..|+.+.+|++.
T Consensus 293 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 359 (466)
T COG2319 293 SPDGKLLASGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLR 359 (466)
T ss_pred CCCCCEEEEeeCCCcEEEEEcCCCceEEEee---ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecC
Confidence 56888889999999999998876554443 11122233333333 2 355555 688999999875
No 166
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=5.5e-17 Score=154.02 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=175.0
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC--------CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--------DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~--------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
++..|.+.|+.++|+ ...|++++.||++++|+++ .-+++.+|.+|.++|.|+++.+ +...+++|+.||+
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~-n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS-NGEHCYSGGIDGT 367 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC-CceEEEeeccCce
Confidence 577899999999998 8999999999999999993 2367889999999999999966 5567799999999
Q ss_pred EEEEEccCCCCC-------cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC--CCCeEE
Q 009274 317 IFVWSFSFPLGH-------EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH--KSAVST 387 (538)
Q Consensus 317 i~vwd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~ 387 (538)
|+.|++...... .....+.++.+ .....+++.....|++++.||+++.|+.....+ .++... .+.-.+
T Consensus 368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtd--avw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pls 444 (577)
T KOG0642|consen 368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTD--AVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLS 444 (577)
T ss_pred eeeeccCCCCCcccccCcchhccceecccc--ceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcce
Confidence 999977522111 11112222222 112346777777899999999999999876655 333222 222345
Q ss_pred EEEeCC---EEEEEecCCcEEEEECCCCceeEEEecCCCC-----ceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcce
Q 009274 388 LAVCNG---VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----AVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFM 457 (538)
Q Consensus 388 l~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~ 457 (538)
+.+-.. +.++...-+.--+.++.....+..+...... .....+...|...+.+++..|+.|+++| ..+++
T Consensus 445 vd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l 524 (577)
T KOG0642|consen 445 VDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKIL 524 (577)
T ss_pred EeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccc
Confidence 555422 3333333333344444444444444322111 1122356778889999999999999999 45688
Q ss_pred eeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeE
Q 009274 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFE 497 (538)
Q Consensus 458 ~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~ 497 (538)
.....|...++++++ +|-+|++++.||.+++|.+....+.
T Consensus 525 ~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~ 566 (577)
T KOG0642|consen 525 HSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCV 566 (577)
T ss_pred hheeeccceecceeecCCCceEEeecCCceeehhhccchhee
Confidence 888899999998876 8999999999999999999766543
No 167
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.74 E-value=2.7e-16 Score=137.35 Aligned_cols=243 Identities=17% Similarity=0.223 Sum_probs=171.1
Q ss_pred EEeecCCCcEEEEEEc---CCEEEEEeCC-------CcEEEEeCCCC---------ceEEEEe-cCCcCeEEEEEecCCC
Q 009274 246 KDLQGHRDCVTGLAVG---GGFLFSSSFD-------KSIHVWSLKDF---------SHVHTFK-GHDHKVMAVVYVDEDQ 305 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~---~~~l~s~s~d-------g~i~iwd~~~~---------~~~~~~~-~h~~~v~~l~~~~~~~ 305 (538)
..|..|.+.|+.++-+ .+.|+|+..| -.+-||.+... +++..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 4467788999999887 5667776553 24679987532 2333443 3556899999999666
Q ss_pred CEEEEEcCCCcEEEEEccCCCCC-cceeeecccCCceeeeEEEEee--cCCEEEEeeCCCcEEEEECCCCceeEEe-cCC
Q 009274 306 PLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGH 381 (538)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~h 381 (538)
++ ++-. |..|.+|++...... ..+..............-.++| +++.+++. .|+++..||+++.+....+ ..|
T Consensus 137 kl-asm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAH 213 (370)
T KOG1007|consen 137 KL-ASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAH 213 (370)
T ss_pred ee-EEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhh
Confidence 55 3333 899999999876552 2222211111112222335565 56666665 5799999999998877766 578
Q ss_pred CCCeEEEEEeCC---EEEEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCC-CCEEEEEeCCCcEEEEeCC--
Q 009274 382 KSAVSTLAVCNG---VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND-- 454 (538)
Q Consensus 382 ~~~v~~l~~~~~---~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~-- 454 (538)
...|..+.|+++ +|++|+.||.|++||.+.-+ ++..+..| .-.+.+ +.|+|. .+++++|+.|..|.+|...
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~H-sHWvW~-VRfn~~hdqLiLs~~SDs~V~Lsca~sv 291 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGH-SHWVWA-VRFNPEHDQLILSGGSDSAVNLSCASSV 291 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCC-ceEEEE-EEecCccceEEEecCCCceeEEEecccc
Confidence 889999999944 89999999999999998755 45555544 333444 577764 5688899999999999421
Q ss_pred -----------------------------cceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCC
Q 009274 455 -----------------------------KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 455 -----------------------------~~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~ 493 (538)
..+.++..|...|++++| |.-.+++-+.||.+.|=.+..
T Consensus 292 SSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 292 SSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred ccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 123467779999999998 677899999999998876643
No 168
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=2.2e-18 Score=150.92 Aligned_cols=113 Identities=19% Similarity=0.356 Sum_probs=80.7
Q ss_pred eeeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 10 TKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
.++++|+| ||||-+..+.+ +.++++|||.|||||.+ .+ ..|+++||||||||++|||+.=+
T Consensus 163 ~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i------~~---------~~Y~~kSDiWslGCllyEMcaL~ 225 (375)
T KOG0591|consen 163 ANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERI------HE---------SGYNFKSDIWSLGCLLYEMCALQ 225 (375)
T ss_pred CCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHH------hc---------CCCCcchhHHHHHHHHHHHHhcC
Confidence 46899999 88888887643 57899999999999999 33 56779999999999999999999
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
||.+.+...+- .+..+- ..++.+.+.-+. .+.+++..|++.+|++||....+
T Consensus 226 ~PF~g~n~~~L~-~KI~qg-------d~~~~p~~~YS~-----------~l~~li~~ci~vd~~~RP~t~~~ 278 (375)
T KOG0591|consen 226 SPFYGDNLLSLC-KKIEQG-------DYPPLPDEHYST-----------DLRELINMCIAVDPEQRPDTVPY 278 (375)
T ss_pred CCcccccHHHHH-HHHHcC-------CCCCCcHHHhhh-----------HHHHHHHHHccCCcccCCCcchH
Confidence 99997443211 111111 111111111111 26779999999999999985433
No 169
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.71 E-value=2.9e-13 Score=136.31 Aligned_cols=285 Identities=29% Similarity=0.463 Sum_probs=200.8
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeC-CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
......+.+|...|.+++|+ +..+++++. |+.+++|+..++..+..+.+|...|.+++|+|++..++++++.|+.|+
T Consensus 145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 224 (466)
T COG2319 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224 (466)
T ss_pred CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence 34555678899999999999 668888885 999999999998999999999999999999976664666669999999
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEeC--CEE
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMSGHKSAVSTLAVCN--GVL 395 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~--~~l 395 (538)
+||...+..... ....+... . +..+++++..+++++.|+.+++||.+.... ...+.+|...+.++.|.+ ..+
T Consensus 225 ~wd~~~~~~~~~--~~~~~~~~--~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 299 (466)
T COG2319 225 LWDLSTGKLLRS--TLSGHSDS--V-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL 299 (466)
T ss_pred EEECCCCcEEee--ecCCCCcc--e-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEE
Confidence 997763222211 22222221 1 227888888888999999999999987664 444467899999999984 577
Q ss_pred EEEecCCcEEEEECCCCceeEEEe-cCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeCCcce--eeeccccceEEEEE
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTVLE-EDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDKFM--KSMQTHKGSVFAVF 471 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~h~~~v~~~~ 471 (538)
++++.|+.+.+||..+........ ..+...+.. +.+.+++..++.+ ..|+.+.+|+..... ....... .+..+.
T Consensus 300 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 377 (466)
T COG2319 300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSS-LSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS-NVLSVS 377 (466)
T ss_pred EEeeCCCcEEEEEcCCCceEEEeeecccCCceEE-EEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCc-eEEEEE
Confidence 779999999999998887766665 222333333 4554443556555 688999999965543 2222222 155555
Q ss_pred e-CCCEEEE-EeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEcC
Q 009274 472 L-EGKWLFT-GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 472 ~-~~~~l~s-gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
+ ....+.. +..++.+.+|+.............. .........+++ .+++++.++.+++|+..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (466)
T COG2319 378 FSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT----SRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442 (466)
T ss_pred ECCCCCEEEEecCCCceEEEecccCeeeeeccCCC----CcEEEEEECCCCcEEEEecCCCcEEEEecc
Confidence 4 2233443 6889999999999887655444321 223333333444 46668999999999875
No 170
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=8e-17 Score=150.20 Aligned_cols=283 Identities=17% Similarity=0.176 Sum_probs=205.4
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd 321 (538)
..|.+|.+.|+.+.|+ |..+++||.|..|.+||+.+++....+. +|...|..-.|.|. +..-+++++.||.+++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 4588999999999999 9999999999999999999988877765 69999988889885 345678999999999987
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEe---cCCCC---CeEEEEEe---
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKS---AVSTLAVC--- 391 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~~---~v~~l~~~--- 391 (538)
+...+.....+....+... ...+++-|+ ...|.+++.|+.+.-+|++++.+...+ ..+.. ..++++..
T Consensus 216 i~~t~~~e~t~rl~~h~g~--vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~n 293 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEGP--VHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRN 293 (559)
T ss_pred eccccceecceecccccCc--cceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCC
Confidence 7654444333333333321 113355554 448999999999999999987654433 23333 45677776
Q ss_pred CCEEEEEecCCcEEEEECCCCce------eEEEecCC----CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-------
Q 009274 392 NGVLYSGSRDGTIRLWSLSDHSL------LTVLEEDS----SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------- 454 (538)
Q Consensus 392 ~~~l~s~s~dg~i~iwd~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~------- 454 (538)
.+.+++++.|..+++||.+.-.. +.++..++ ....+.++.++.++.-+.++..|-.|+++...
T Consensus 294 t~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p 373 (559)
T KOG1334|consen 294 TNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEP 373 (559)
T ss_pred ccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCC
Confidence 44899999999999999975322 22222221 22233447899888888888889999999521
Q ss_pred -------ccee-eeccccc--eEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe--C
Q 009274 455 -------KFMK-SMQTHKG--SVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--Q 519 (538)
Q Consensus 455 -------~~~~-~~~~h~~--~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 519 (538)
.... .+++|.. .|..+.| ...++++||.-|.|.||+-.++++...+.... .+++|+-.. .
T Consensus 374 ~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr-----~VVNCLEpHP~~ 448 (559)
T KOG1334|consen 374 DPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDR-----HVVNCLEPHPHL 448 (559)
T ss_pred CCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhccc-----ceEeccCCCCCC
Confidence 1122 3788865 4666766 56899999999999999999988766554432 277777665 3
Q ss_pred CEEEEEECCCeEEEEE
Q 009274 520 GKLFVGCADRTVKVYY 535 (538)
Q Consensus 520 ~~l~sg~~dg~v~vw~ 535 (538)
-.|++.+-|..|+||-
T Consensus 449 PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 449 PVLASSGIDHDVKIWT 464 (559)
T ss_pred chhhccCCccceeeec
Confidence 4588899999999995
No 171
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=4.4e-15 Score=137.78 Aligned_cols=268 Identities=12% Similarity=0.178 Sum_probs=196.3
Q ss_pred CCCCCccceeeeeccCcceeEEeecCCeEEEEEeecC-----------CCcEEEEEEc--CC-EEEEEeCCCcEEEEeCC
Q 009274 215 ENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQGH-----------RDCVTGLAVG--GG-FLFSSSFDKSIHVWSLK 280 (538)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~h-----------~~~V~~l~~~--~~-~l~s~s~dg~i~iwd~~ 280 (538)
..+....+.++.+.+.-..++++..++.++++.+.|. ..+|.+.+|. |. .+++++.....+.||+.
T Consensus 209 ~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 209 AHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred CCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc
Confidence 3444566889999999999999999999999998764 3578888887 66 89999999999999998
Q ss_pred CCceEE--EEecCC-cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEE
Q 009274 281 DFSHVH--TFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (538)
Q Consensus 281 ~~~~~~--~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (538)
+.+..+ .+.++. ..+.....+++++ +++..+..|.|.+....++.....++.. ....-.+|+.+++.|++
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s~Kie------G~v~~~~fsSdsk~l~~ 361 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITSFKIE------GVVSDFTFSSDSKELLA 361 (514)
T ss_pred ccccccccCCCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhheeeec------cEEeeEEEecCCcEEEE
Confidence 876543 233443 3455666777554 8899999999999988776554444332 12223477788899999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCeE--EEEEe--CCEEEEEecCCcEEEEECCC------CceeEEEecCCCCceE
Q 009274 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAVS--TLAVC--NGVLYSGSRDGTIRLWSLSD------HSLLTVLEEDSSGAVS 427 (538)
Q Consensus 358 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~--~l~~~--~~~l~s~s~dg~i~iwd~~~------~~~~~~~~~~~~~~~~ 427 (538)
++.+|.|.+||+++..+++.+.. .+.|. +++.+ +.++++||..|.|.|||..+ .+++..+..- ....
T Consensus 362 ~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNL--tt~I 438 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNL--TTAI 438 (514)
T ss_pred EcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhh--heee
Confidence 99999999999999999988863 33333 34444 67999999999999999754 2344443322 1223
Q ss_pred EEEEEcCCCCEEEEEeC--CCcEEEEeCCcc--eeeecc---ccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 428 SVLSLTAVQHTLVVSHE--SGSIKVWRNDKF--MKSMQT---HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 428 ~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~--~~~~~~---h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+.+.|+++.++|+.++. +..+++-....+ ...+.. .-+.++|++| .+.+|+.|..+|.+.+|.+.
T Consensus 439 tsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 439 TSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 44799999999998875 567887764432 222222 3345677776 89999999999999999874
No 172
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.71 E-value=4.5e-15 Score=135.68 Aligned_cols=278 Identities=20% Similarity=0.212 Sum_probs=184.0
Q ss_pred CCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC---------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 252 RDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF---------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 252 ~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
..+|.++.|. .+.++||+.|..|++|.++.+ +....+..|...|+++.|+|+++ ++++|+.+|.+.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-lLASg~D~g~v~l 91 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-LLASGGDGGEVFL 91 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-eeeecCCCceEEE
Confidence 3678889887 458999999999999987532 22445678999999999999554 7899999999999
Q ss_pred EEccCCCC------------Cccee-eecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeE
Q 009274 320 WSFSFPLG------------HEPLK-KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVS 386 (538)
Q Consensus 320 wd~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 386 (538)
|....... ..... ....+.. ..--.+++++++++++++.|..+++||+..|+....+..|...|.
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~--diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRD--DIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQ 169 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEeccccc--chhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccc
Confidence 98662111 00011 1111111 111247889999999999999999999999999999999999999
Q ss_pred EEEEe--CCEEEEEecCCcEEEEECCCCceeEEEe---------cCCCCc------------eEEEEEEcCCCCEEEEEe
Q 009274 387 TLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLE---------EDSSGA------------VSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 387 ~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~---------~~~~~~------------~~~~~~~~~~~~~l~~~~ 443 (538)
.++|. +.++++-+.|...+.+++...+.+.... .+..+. ....++|+|+|.++++..
T Consensus 170 gvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 170 GVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 99999 7799999999887777776544332221 000111 112257899999988754
Q ss_pred C----CC-----cEEEEe---CCcceeeeccccceEEEEE---------e-----------CCCEEEEEeCCCeEEEEec
Q 009274 444 E----SG-----SIKVWR---NDKFMKSMQTHKGSVFAVF---------L-----------EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 444 ~----dg-----~i~iwd---~~~~~~~~~~h~~~v~~~~---------~-----------~~~~l~sgs~dg~v~iwd~ 491 (538)
. .+ ..++|+ +..+...+.+...+...+. + .+-.++.++ .+.|++||.
T Consensus 250 g~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydt 328 (434)
T KOG1009|consen 250 GLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDT 328 (434)
T ss_pred ceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEecc
Confidence 2 22 234554 3344444444333333221 1 122344444 568999999
Q ss_pred CCCeeEeeeecCCcccCCCceEEEEEe-CC-EEEEEECCCeEEEEEcC
Q 009274 492 AGDEFEEDVIPTGAIPCGSVITALLYW-QG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~vw~~~ 537 (538)
++.......... +-..++.++|. |+ .++..+.||...+--|+
T Consensus 329 q~~~P~~~v~ni----hy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe 372 (434)
T KOG1009|consen 329 QTLEPLAVVDNI----HYSAITDIAWSDDGSVLLVSSTDGFCSLVTFE 372 (434)
T ss_pred ccccceEEEeee----eeeeecceeecCCCcEEEEeccCCceEEEEEc
Confidence 886654433322 33345555555 44 47889999987765543
No 173
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71 E-value=5.5e-15 Score=152.17 Aligned_cols=253 Identities=17% Similarity=0.225 Sum_probs=172.3
Q ss_pred CCeEEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC-------CceEEEEecCCcCeEEEEEecCCCCEEE
Q 009274 240 KGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-------FSHVHTFKGHDHKVMAVVYVDEDQPLCI 309 (538)
Q Consensus 240 ~~~~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 309 (538)
..++.+..+..|...|..++.+ +.+++|||.||+|++||... .+...++..-...+.++...+.+. .+|
T Consensus 1036 p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~-~~A 1114 (1431)
T KOG1240|consen 1036 PRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD-QFA 1114 (1431)
T ss_pred ccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC-eEE
Confidence 3457788899999999999998 58999999999999999753 123344444567888888887555 557
Q ss_pred EEcCCCcEEEEEccCCCCCcc----eeeecccCCceeeeEEEEeec-CC-EEEEeeCCCcEEEEECCCCceeEEec--CC
Q 009274 310 SGDSGGGIFVWSFSFPLGHEP----LKKWNEEKDWRYSGIHALTTS-GR-YLYTGSGDRTIKAWSLLDGTLSCTMS--GH 381 (538)
Q Consensus 310 s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~i~iwd~~~~~~~~~~~--~h 381 (538)
.++.||.|++.+++....... ....+.+.......+.++... +. .++.+..-+.|..||+++....++++ ..
T Consensus 1115 v~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1115 VSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred EEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence 779999999999876322111 111222222222333333332 33 78888888999999999887776664 34
Q ss_pred CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEc---CCCCEEEEEe--CCCcEEEEeCC
Q 009274 382 KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT---AVQHTLVVSH--ESGSIKVWRND 454 (538)
Q Consensus 382 ~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~--~dg~i~iwd~~ 454 (538)
.+.|++++.+ .+.++.|...|.+.+||+|-+.++..+..+....+.. ++.. +.....++++ ..+.|.+|+..
T Consensus 1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~-v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRH-VWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcce-EEeeccCCCCceEEEecccCCCceeeeecc
Confidence 5789999998 6699999999999999999999988887665554444 2333 3334555544 47889999844
Q ss_pred c--ceeeeccc-----------------cc---eEEE-EEeCCCEEEEEeCCCeEEEEecCCC
Q 009274 455 K--FMKSMQTH-----------------KG---SVFA-VFLEGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 455 ~--~~~~~~~h-----------------~~---~v~~-~~~~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+ ....+-.. .. .+.+ +.-.+..+.+|+.|..|+.||....
T Consensus 1274 ~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1274 TGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred cCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCc
Confidence 2 11111110 01 1111 1225678999999999999997543
No 174
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.70 E-value=1.3e-15 Score=146.98 Aligned_cols=247 Identities=19% Similarity=0.253 Sum_probs=176.3
Q ss_pred cCcceeEEeecCCeEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeEEEEEecCCC
Q 009274 229 GGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQ 305 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~ 305 (538)
.+++.++-...+|. .+.+++||++.|.|++|+ |+.+++|+.|..|.+|+-+- ...++ .|.+.|.|+.|+|-+.
T Consensus 31 Ag~rlliyD~ndG~-llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~LkYSH~D~IQCMsFNP~~h 106 (1081)
T KOG1538|consen 31 AGSRLLVYDTSDGT-LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGILKYSHNDAIQCMSFNPITH 106 (1081)
T ss_pred cCCEEEEEeCCCcc-cccccccccceEEEEEEccCCceeccCCCceeEEEecccc---cceeeeccCCeeeEeecCchHH
Confidence 34444444444444 578899999999999999 99999999999999998532 22222 5999999999998554
Q ss_pred CEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe---cCCC
Q 009274 306 PLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHK 382 (538)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~ 382 (538)
.+++++. ...-+|...... + ..+........++|..||.+++.|-.+|+|.+-+- +++....+ .|.+
T Consensus 107 -~LasCsL-sdFglWS~~qK~----V---~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~N 176 (1081)
T KOG1538|consen 107 -QLASCSL-SDFGLWSPEQKS----V---SKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSN 176 (1081)
T ss_pred -Hhhhcch-hhccccChhhhh----H---HhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCC
Confidence 4566654 344567654221 1 11111133345578889999999999999999874 45444333 3577
Q ss_pred CCeEEEEEe-------CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-
Q 009274 383 SAVSTLAVC-------NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND- 454 (538)
Q Consensus 383 ~~v~~l~~~-------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~- 454 (538)
++|.+++|+ ++.+++.....++.++.+. |+.+..-+. -+.-..++.+.++|.++..|+.|+.+++|...
T Consensus 177 spiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~--L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~G 253 (1081)
T KOG1538|consen 177 SPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRA--LNFDPCCISYFTNGEYILLGGSDKQLSLFTRDG 253 (1081)
T ss_pred CCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeeccccc--CCCCchhheeccCCcEEEEccCCCceEEEeecC
Confidence 899999998 2388889999999999885 333332111 11223347888999999999999999999733
Q ss_pred cceeeeccccceEEEEE--eCCCEEEEEeCCCeEEEEecC
Q 009274 455 KFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 455 ~~~~~~~~h~~~v~~~~--~~~~~l~sgs~dg~v~iwd~~ 492 (538)
-.+.++.....+|+.+. |++++++.|+.||+|..|++.
T Consensus 254 vrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 254 VRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred eEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 34455555667888775 599999999999999999874
No 175
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.70 E-value=5.7e-15 Score=131.14 Aligned_cols=256 Identities=17% Similarity=0.195 Sum_probs=182.6
Q ss_pred eeeccCcceeEEeecCCeEEEEEeec----------------------CCCcEEEEEEc---------CCEEEEEeCCCc
Q 009274 225 ARAAGGVKDLVNGLSKGNVKFKDLQG----------------------HRDCVTGLAVG---------GGFLFSSSFDKS 273 (538)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~l~~----------------------h~~~V~~l~~~---------~~~l~s~s~dg~ 273 (538)
...++++.-+++...+....+|++.. ....|...+|- ..++++.+.|.-
T Consensus 55 ckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~P 134 (406)
T KOG2919|consen 55 CKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQP 134 (406)
T ss_pred ceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCc
Confidence 34455666666666666666666421 12345555552 578999999999
Q ss_pred EEEEeCCCCceEEEEec--CCc---CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce-eeecc--cCCceeeeE
Q 009274 274 IHVWSLKDFSHVHTFKG--HDH---KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KKWNE--EKDWRYSGI 345 (538)
Q Consensus 274 i~iwd~~~~~~~~~~~~--h~~---~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~--~~~~~~~~~ 345 (538)
|++||.-+|+....+.+ |.. ...+++|+|++..++ ++....|+++|+..+...... ..... .....+.++
T Consensus 135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlf--aGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc 212 (406)
T KOG2919|consen 135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLF--AGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISC 212 (406)
T ss_pred eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEe--ecccceEEEeeccCCCCCCcchhhhhcccccccceeee
Confidence 99999999998887764 333 457899999887653 456799999999544332222 22211 111234456
Q ss_pred EEEeecC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec-CCcEEEEECCCC-ceeEEEec
Q 009274 346 HALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR-DGTIRLWSLSDH-SLLTVLEE 420 (538)
Q Consensus 346 ~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-dg~i~iwd~~~~-~~~~~~~~ 420 (538)
.+++|.. ..++.|+....+-||.-..+.++..+.+|.+.|+.+.|. ++.|++|+. |..|.+||+|.. .++..+..
T Consensus 213 ~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~r 292 (406)
T KOG2919|consen 213 FAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALER 292 (406)
T ss_pred eeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhh
Confidence 6777754 499999999999999988999999999999999999999 678888875 788999999864 45555554
Q ss_pred CCC-CceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEeCC--CEEEEEeC
Q 009274 421 DSS-GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFLEG--KWLFTGGW 482 (538)
Q Consensus 421 ~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~~~--~~l~sgs~ 482 (538)
+.. ....-.+...|++++|++|+.||.|++||+.. ....+..|...++.++.+. .++++++.
T Consensus 293 hv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 293 HVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred hccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccC
Confidence 433 11222256779999999999999999999665 4566777888888888744 45555553
No 176
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.70 E-value=4.9e-15 Score=129.55 Aligned_cols=264 Identities=18% Similarity=0.248 Sum_probs=182.7
Q ss_pred CCCcEEEEeCCCCce---EEEEecCCcCeEEEEEecCCCCEEEEEcCC-------CcEEEEEccCCCCCcc------eee
Q 009274 270 FDKSIHVWSLKDFSH---VHTFKGHDHKVMAVVYVDEDQPLCISGDSG-------GGIFVWSFSFPLGHEP------LKK 333 (538)
Q Consensus 270 ~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~~~~------~~~ 333 (538)
.|+.|.+.+++.... .+.|..|.+.|..++-+|.+..+|+++..+ ..+.||.+..+..... +..
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 367788877765432 245667889999999999999999988653 2467999875543311 111
Q ss_pred ecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce-eEEec-----CCCCCeEEEEEe---CCEEEEEecCCcE
Q 009274 334 WNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMS-----GHKSAVSTLAVC---NGVLYSGSRDGTI 404 (538)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~-----~h~~~v~~l~~~---~~~l~s~s~dg~i 404 (538)
...... ....++.+.|++..+++-. |..|.+|++..+.. +..+. +|....++-+|+ ++.-+....|+++
T Consensus 118 Ldteav-g~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl 195 (370)
T KOG1007|consen 118 LDTEAV-GKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTL 195 (370)
T ss_pred CCHHHh-CceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcE
Confidence 111111 1234667888888888765 78999999987665 33332 355667788887 3444555568999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCC-EEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe---CCCEE
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWL 477 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~---~~~~l 477 (538)
..||+++.+....+...|...+.. +.|+|+.+ +|++|+.||.|++||+++ +++.+.+|.-+|+++.| ..+++
T Consensus 196 ~~~D~RT~~~~~sI~dAHgq~vrd-lDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLi 274 (370)
T KOG1007|consen 196 QFWDLRTMKKNNSIEDAHGQRVRD-LDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLI 274 (370)
T ss_pred EEEEccchhhhcchhhhhcceeee-ccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEE
Confidence 999999998888887766554544 68888764 688899999999999664 78889999999999987 67899
Q ss_pred EEEeCCCeEEEEecCCCee--------------------EeeeecCC----cccCCCceEEEEEe--CCE-EEEEECCCe
Q 009274 478 FTGGWDKTVSVQELAGDEF--------------------EEDVIPTG----AIPCGSVITALLYW--QGK-LFVGCADRT 530 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~~~--------------------~~~~~~~~----~~~~~~~~~~~~~~--~~~-l~sg~~dg~ 530 (538)
++||.|..|.+|....-.. .......+ .-.+...+.++.|+ |.. +++-+.||.
T Consensus 275 Ls~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGR 354 (370)
T KOG1007|consen 275 LSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGR 354 (370)
T ss_pred EecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCce
Confidence 9999999999996532110 00000010 01234456666665 444 566899999
Q ss_pred EEEEEc
Q 009274 531 VKVYYY 536 (538)
Q Consensus 531 v~vw~~ 536 (538)
+.|=++
T Consensus 355 viIs~V 360 (370)
T KOG1007|consen 355 VIISSV 360 (370)
T ss_pred EEeecC
Confidence 987554
No 177
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=2e-15 Score=135.08 Aligned_cols=257 Identities=16% Similarity=0.206 Sum_probs=175.6
Q ss_pred ceeEEeecCCeEEEEE---------eecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCceEEE--EecCC-cCe
Q 009274 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSHVHT--FKGHD-HKV 295 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~h~-~~v 295 (538)
..++++.++|.+++++ +++|...++.+.|. +..+.+|+.||+|++||+.+...... +..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 4567777777777765 67899999999886 67899999999999999987655443 34454 345
Q ss_pred EEEEEecCCCCEEEEEc----CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECC
Q 009274 296 MAVVYVDEDQPLCISGD----SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLL 370 (538)
Q Consensus 296 ~~l~~~~~~~~~l~s~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~ 370 (538)
.+++-. ....++++|. .|-.+.+||++..+.. +..+...+...... +.|+| +.+.|++||.||.|.+||+.
T Consensus 121 ~~ld~n-ck~~ii~~GtE~~~s~A~v~lwDvR~~qq~--l~~~~eSH~DDVT~-lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 121 ICLDLN-CKKNIIACGTELTRSDASVVLWDVRSEQQL--LRQLNESHNDDVTQ-LRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred eEeecc-CcCCeEEeccccccCceEEEEEEeccccch--hhhhhhhccCccee-EEecCCCCCeEEeecccceEEeeecC
Confidence 555543 2455667765 4678999999865432 44444443334443 35666 56699999999999999987
Q ss_pred CCce---eEEecCCCCCeEEEEEe-CC--EEEEEecCCcEEEEECCCCceeEEEecCCC---------CceEEEEEEcC-
Q 009274 371 DGTL---SCTMSGHKSAVSTLAVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSS---------GAVSSVLSLTA- 434 (538)
Q Consensus 371 ~~~~---~~~~~~h~~~v~~l~~~-~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~- 434 (538)
.... +...-.|...|.++.|. ++ .+.+-+...+..+|++..+.....+..... ..-..+-..+|
T Consensus 197 ~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~ 276 (376)
T KOG1188|consen 197 KDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPG 276 (376)
T ss_pred CCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCC
Confidence 5432 22233477889999999 44 789999999999999998886555443210 00011112323
Q ss_pred CCCEEEEEeC-CCcEEEEe--------CCcceeeecc-ccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 435 VQHTLVVSHE-SGSIKVWR--------NDKFMKSMQT-HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 435 ~~~~l~~~~~-dg~i~iwd--------~~~~~~~~~~-h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+....+.++. -|+..++- ..+....+++ |...|.++.| .+..++|||.||.+.+|...
T Consensus 277 ~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 277 DKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred CcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 3445555544 56666553 2235556666 6677778877 68899999999999999964
No 178
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=1.8e-15 Score=137.41 Aligned_cols=288 Identities=10% Similarity=0.058 Sum_probs=189.4
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC------CCceEEEEe-cCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK------DFSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~------~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
+-.++.+|.+.|+++.|+ +++|++|+.|..+++|+++ +.+++.... .|...|.|++|.. ++..+++|..+
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~~~ 126 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGERW 126 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCCCc
Confidence 345678999999999999 9999999999999999985 335555443 3568999999965 67788999999
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc-eeE--EecCCCCCeEEEEEe
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSC--TMSGHKSAVSTLAVC 391 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~-~~~--~~~~h~~~v~~l~~~ 391 (538)
++|..-|+++......... ........-+..+|-.+.+++.+.++.|.+||.+... .+. .+........++.|+
T Consensus 127 ~~VI~HDiEt~qsi~V~~~---~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~ 203 (609)
T KOG4227|consen 127 GTVIKHDIETKQSIYVANE---NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFH 203 (609)
T ss_pred ceeEeeecccceeeeeecc---cCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeec
Confidence 9999999987654332222 1111111234566778899999999999999998654 222 223345567788888
Q ss_pred ---CCEEEEEecCCcEEEEECCCCce-eEEEec----CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeecc
Q 009274 392 ---NGVLYSGSRDGTIRLWSLSDHSL-LTVLEE----DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQT 462 (538)
Q Consensus 392 ---~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~ 462 (538)
+.+|++.+..+-+.+||.+.... +..... .....-.....|+|+|+.+++--....-.+||.-. ....++.
T Consensus 204 P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~ 283 (609)
T KOG4227|consen 204 PETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKS 283 (609)
T ss_pred CCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEec
Confidence 56999999999999999986542 211111 11111112257899999988877666667788432 2222222
Q ss_pred -cc-------ceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEee---eec-----------CCc----ccCCCceEEE
Q 009274 463 -HK-------GSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEED---VIP-----------TGA----IPCGSVITAL 515 (538)
Q Consensus 463 -h~-------~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~---~~~-----------~~~----~~~~~~~~~~ 515 (538)
|. ..+.+++| +...+++|+.+=.|++|.+.......- ..+ .+. ..+.+++.-+
T Consensus 284 D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQV 363 (609)
T KOG4227|consen 284 DHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQV 363 (609)
T ss_pred cCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccce
Confidence 22 24556677 677799999999999998853211000 000 000 0123344433
Q ss_pred EE-e-CCEEEEEECCCeEEEEE
Q 009274 516 LY-W-QGKLFVGCADRTVKVYY 535 (538)
Q Consensus 516 ~~-~-~~~l~sg~~dg~v~vw~ 535 (538)
-+ + +..|++.+-.+.+++|.
T Consensus 364 RF~~H~~~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 364 RFSQHNNLLVSSGVENSFKLWS 385 (609)
T ss_pred eecCCcceEeccchhhheeccc
Confidence 33 3 33466688899999996
No 179
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.69 E-value=1e-13 Score=125.59 Aligned_cols=196 Identities=15% Similarity=0.204 Sum_probs=153.4
Q ss_pred CcEEEEEEcCCEEEEEeCCCc--EEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 253 DCVTGLAVGGGFLFSSSFDKS--IHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 253 ~~V~~l~~~~~~l~s~s~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..|-..-|+..++|..+.+.. +++.+...+..+..+. ...+|.++.++. +.++.+=. ..|+|||+++.+....
T Consensus 47 ~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr---~RLvV~Le-e~IyIydI~~MklLhT 121 (391)
T KOG2110|consen 47 VSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNR---KRLVVCLE-ESIYIYDIKDMKLLHT 121 (391)
T ss_pred eEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEcc---ceEEEEEc-ccEEEEecccceeehh
Confidence 355566677888877776644 8999988887777665 456899999843 33444433 3499999998877777
Q ss_pred eeeecccCCceeeeEEEEeecCC--EEEEee--CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCc-
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGR--YLYTGS--GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT- 403 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~- 403 (538)
+.....+ ...+++++++.. +++.-+ ..|.|.+||..+-+++..+..|++++-+++|+ +.+|+++|..|+
T Consensus 122 I~t~~~n----~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTV 197 (391)
T KOG2110|consen 122 IETTPPN----PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTV 197 (391)
T ss_pred hhccCCC----ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceE
Confidence 7665332 234667777654 666533 36899999999999999999999999999999 669999999998
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce
Q 009274 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM 457 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 457 (538)
||++.+.+|+.+..++..........++|++++.+|++.+..++|++|.+.+..
T Consensus 198 IRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 198 IRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 799999999999999876665556668999999999999999999999876533
No 180
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.68 E-value=1.6e-14 Score=144.23 Aligned_cols=261 Identities=17% Similarity=0.208 Sum_probs=176.0
Q ss_pred CCcEEEEeCCCC-ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC--CcceeeecccCCceeeeEEE
Q 009274 271 DKSIHVWSLKDF-SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG--HEPLKKWNEEKDWRYSGIHA 347 (538)
Q Consensus 271 dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~ 347 (538)
++.+.+|++.+. .+...+. -...|.++.|+|.+..+++.|..+|.|.+||++.... ...+......+......+..
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred CceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 347999999876 3334443 5678999999999999999999999999999987765 22332222222212221211
Q ss_pred E-eecCCEEEEeeCCCcEEEEECCCCce-eEE-----ec------CCCCCeEEEEEe---CCEEEEEecCCcEEEEECCC
Q 009274 348 L-TTSGRYLYTGSGDRTIKAWSLLDGTL-SCT-----MS------GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 348 ~-~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~-----~~------~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~ 411 (538)
. +..+.-+++++.||.|..|+++.-.. ... .. .....+++++|. ++.++.|+.+|.|.--+-..
T Consensus 300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g 379 (555)
T KOG1587|consen 300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG 379 (555)
T ss_pred eccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence 1 12234699999999999999875432 111 11 122367888888 56999999999998744333
Q ss_pred CceeE--------EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceEEEEEe---CCCEE
Q 009274 412 HSLLT--------VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWL 477 (538)
Q Consensus 412 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v~~~~~---~~~~l 477 (538)
.+... .+. .+.+.+.. +.++|-+..++..+.|.+++||... .++..+..+...+++++| ....+
T Consensus 380 ~~~~~~~~~~~~~~~~-~h~g~v~~-v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF 457 (555)
T KOG1587|consen 380 YTPAPEVSYKGHSTFI-THIGPVYA-VSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVF 457 (555)
T ss_pred Cccccccccccccccc-ccCcceEe-eecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEE
Confidence 22211 222 22444444 5777766655555559999999844 577777888888999988 55689
Q ss_pred EEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeC-CE-EEEEECCCeEEEEEcC
Q 009274 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~sg~~dg~v~vw~~~ 537 (538)
+++..||.+.+||+............. +..+...+.++. +. +++|...|.+++|+++
T Consensus 458 ~~~d~~G~l~iWDLl~~~~~Pv~s~~~---~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 458 ATVDGDGNLDIWDLLQDDEEPVLSQKV---CSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred EEEcCCCceehhhhhccccCCcccccc---cccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 999999999999997665443333322 234556666654 65 6679999999999985
No 181
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.68 E-value=6.6e-17 Score=159.67 Aligned_cols=269 Identities=16% Similarity=0.284 Sum_probs=190.8
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
.+.||..+|.|..|. |.++++|+.|..|+||..+++.++....+|.+.|+.++.+. ++.++++++.|..|++|.+..
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~-~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSS-NNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccch-hhhhhhhcccCceEEEEecCC
Confidence 467999999999999 99999999999999999999999999999999999999865 566778999999999999887
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe----c-CCCCCeEEEEEe--CCEEEE
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM----S-GHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~----~-~h~~~v~~l~~~--~~~l~s 397 (538)
+.....+.. +...+.++...... +.+.||++++||.+- .++... + ...+.+.++.|. ..-+++
T Consensus 264 ~~pvsvLrg-------htgavtaiafsP~~--sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 264 GAPVSVLRG-------HTGAVTAIAFSPRA--SSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred CchHHHHhc-------cccceeeeccCccc--cCCCCCceEeccccc-cccccCCCCCCcccccceeeeecccccccccc
Confidence 665554444 22345667766654 778899999999872 211111 1 122445566665 447889
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe---
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--- 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--- 472 (538)
++.|+.-..|.+..-..- ......+...+....+.+++-.+-.+++|++ +.....+.+|...+..+.+
T Consensus 334 gs~d~ea~n~e~~~l~~~-------~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpf 406 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQLAWR-------SNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPF 406 (1113)
T ss_pred ccCCcccccchhhHhhhh-------ccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCC
Confidence 999998888866432110 0001110111111245666777788899994 4467788888888777654
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
+.....+++.||...|||+-.+....... ..+...+.+.|+.||. ++....-|.++|...+
T Consensus 407 n~ri~msag~dgst~iwdi~eg~pik~y~----~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~g 468 (1113)
T KOG0644|consen 407 NPRIAMSAGYDGSTIIWDIWEGIPIKHYF----IGHGKLVDGKFSQDGTSIALSDDHGQLYILGTG 468 (1113)
T ss_pred CcHhhhhccCCCceEeeecccCCcceeee----cccceeeccccCCCCceEecCCCCCceEEeccC
Confidence 88889999999999999998776544433 2255667777777776 4455566778776543
No 182
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=6.7e-14 Score=140.13 Aligned_cols=283 Identities=16% Similarity=0.199 Sum_probs=194.5
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC----CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
..|.-.++|.+++ ++++++|..||.|.+|.--. ......+.=|..+|.+++|++++. ++++|+..|.+.+|.+
T Consensus 202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~-~LlSGG~E~VLv~Wq~ 280 (792)
T KOG1963|consen 202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGA-YLLSGGREGVLVLWQL 280 (792)
T ss_pred hhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCc-eEeecccceEEEEEee
Confidence 3477778999999 99999999999999996322 233556777999999999999665 6799999999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC 391 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~ 391 (538)
.+++ .+.+..... ...-..+++|+++.+....|..|.+....+.+...++.+- .+-.+.++++
T Consensus 281 ~T~~-kqfLPRLgs-----~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~id 354 (792)
T KOG1963|consen 281 ETGK-KQFLPRLGS-----PILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSID 354 (792)
T ss_pred cCCC-cccccccCC-----eeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEc
Confidence 9877 333333222 1223477899999999999999999988666554444322 3345566666
Q ss_pred --CCEEEEEecCCcEEEEECCCCceeEEEec----CCCCc-----eEEEEEEcCCCCEEEEEe--------CCC--cEEE
Q 009274 392 --NGVLYSGSRDGTIRLWSLSDHSLLTVLEE----DSSGA-----VSSVLSLTAVQHTLVVSH--------ESG--SIKV 450 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~l~~~~--------~dg--~i~i 450 (538)
.+.++-.+..|.|.+||+.+.+.+..+.. ...+. .....+.+..|.++++.- .|| .+++
T Consensus 355 pr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKF 434 (792)
T KOG1963|consen 355 PRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKF 434 (792)
T ss_pred CCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEE
Confidence 45788888999999999988776655532 11111 112234556688888863 233 4677
Q ss_pred EeCCcc-------eeeeccccceEEEEEe----CCCEEEEEeCCCeEEEEecCCCe------eEeeeecCCcccCCCceE
Q 009274 451 WRNDKF-------MKSMQTHKGSVFAVFL----EGKWLFTGGWDKTVSVQELAGDE------FEEDVIPTGAIPCGSVIT 513 (538)
Q Consensus 451 wd~~~~-------~~~~~~h~~~v~~~~~----~~~~l~sgs~dg~v~iwd~~~~~------~~~~~~~~~~~~~~~~~~ 513 (538)
|-.... ......|...+.+..+ .....++++.||.+++|-+.+.+ ..+.+...+..+......
T Consensus 435 W~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a 514 (792)
T KOG1963|consen 435 WQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITA 514 (792)
T ss_pred EEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccc
Confidence 853221 1223457766655543 34489999999999999884332 233333333333333444
Q ss_pred EEEEeCCEEEEEECCCeEEEEEcCC
Q 009274 514 ALLYWQGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 514 ~~~~~~~~l~sg~~dg~v~vw~~~~ 538 (538)
+++..||.+++.+.|++|.+||+.+
T Consensus 515 ~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 515 LCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred hhhcCCCcEEEEecCCEEEEecCCC
Confidence 5556699999999999999999854
No 183
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=3.3e-14 Score=136.06 Aligned_cols=261 Identities=15% Similarity=0.208 Sum_probs=190.5
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEeec--------CCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC------
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQG--------HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF------ 282 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--------h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~------ 282 (538)
..+.++...+.+..+++|+.+|.+++|.+.+ -.+.|.|++|+ ...++.++.+..+.|-+..-|
T Consensus 401 g~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~ 480 (733)
T KOG0650|consen 401 GLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVG 480 (733)
T ss_pred CeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhc
Confidence 4466777888999999999999999999754 35789999998 333444444444555442111
Q ss_pred -------------------------------ceEEEEecCCcCeEEEEEecCCCCEEEEEcC---CCcEEEEEccCCCCC
Q 009274 283 -------------------------------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDS---GGGIFVWSFSFPLGH 328 (538)
Q Consensus 283 -------------------------------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~ 328 (538)
.-+...-.|...|..+.|+..+. +|++... ...|.|.++......
T Consensus 481 ~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGD-YlatV~~~~~~~~VliHQLSK~~sQ 559 (733)
T KOG0650|consen 481 PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGD-YLATVMPDSGNKSVLIHQLSKRKSQ 559 (733)
T ss_pred chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCc-eEEEeccCCCcceEEEEeccccccc
Confidence 00122234778999999998666 4455433 356888888765544
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEE
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRL 406 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~i 406 (538)
.++....+ ......|+|...+|++++. ..|++||+...+.+..+......|.+++.+ ++.|+.|+.|+.+..
T Consensus 560 ~PF~kskG-----~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~W 633 (733)
T KOG0650|consen 560 SPFRKSKG-----LVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCW 633 (733)
T ss_pred CchhhcCC-----ceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEE
Confidence 44433222 1224577887788888877 689999999988888888788899999999 579999999999999
Q ss_pred EECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe------C-C----cceeeeccccce----EEEE
Q 009274 407 WSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR------N-D----KFMKSMQTHKGS----VFAV 470 (538)
Q Consensus 407 wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd------~-~----~~~~~~~~h~~~----v~~~ 470 (538)
+|+.-. ++.+++..| ...+.. +++++.-.++++|+.||++.++. + . -+++.+.+|... |..+
T Consensus 634 fDldlsskPyk~lr~H-~~avr~-Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~ 711 (733)
T KOG0650|consen 634 FDLDLSSKPYKTLRLH-EKAVRS-VAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDT 711 (733)
T ss_pred EEcccCcchhHHhhhh-hhhhhh-hhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEee
Confidence 999865 455555555 344444 58999889999999999999984 1 1 256788888766 7766
Q ss_pred Ee--CCCEEEEEeCCCeEEEE
Q 009274 471 FL--EGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 471 ~~--~~~~l~sgs~dg~v~iw 489 (538)
.| ...+|++++.||+|++|
T Consensus 712 ~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 712 IWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cccCCCceEEecCCCceEEee
Confidence 66 77899999999999998
No 184
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=6e-14 Score=119.87 Aligned_cols=194 Identities=16% Similarity=0.250 Sum_probs=141.0
Q ss_pred cEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 254 ~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
.|+++... .+-++.++.|+.++-||+++|+...++++|++.|.++.--. ...-+++|+.||++++||.++.+....+
T Consensus 116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~-~~~qilsG~EDGtvRvWd~kt~k~v~~i 194 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRN-ANGQILSGAEDGTVRVWDTKTQKHVSMI 194 (325)
T ss_pred ccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecc-cCcceeecCCCccEEEEeccccceeEEe
Confidence 45666665 45566666899999999999999999999999999998733 3445689999999999999998877766
Q ss_pred eeecccCCce---eeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEE
Q 009274 332 KKWNEEKDWR---YSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 332 ~~~~~~~~~~---~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd 408 (538)
.......... ...+.++.-+.+.+++|+. ..+.+|++++.++...+. -..++..+.|.++.+++++..+.+.-|.
T Consensus 195 e~yk~~~~lRp~~g~wigala~~edWlvCGgG-p~lslwhLrsse~t~vfp-ipa~v~~v~F~~d~vl~~G~g~~v~~~~ 272 (325)
T KOG0649|consen 195 EPYKNPNLLRPDWGKWIGALAVNEDWLVCGGG-PKLSLWHLRSSESTCVFP-IPARVHLVDFVDDCVLIGGEGNHVQSYT 272 (325)
T ss_pred ccccChhhcCcccCceeEEEeccCceEEecCC-CceeEEeccCCCceEEEe-cccceeEeeeecceEEEeccccceeeee
Confidence 6554433211 2235678888889988765 679999999999888876 4677889999999999999999999998
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
+. |.........+......+...+| -+++-.++....+.++.
T Consensus 273 l~-Gvl~a~ip~~s~~c~s~s~~~~p-~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 273 LN-GVLQANIPVESTACYSASWQTSP-IKFISIAGFSNKLHILK 314 (325)
T ss_pred ec-cEEEEeccCCccceeeecccCCc-eEEEEecccceeeeeee
Confidence 74 44434443333322222222223 34566667777777764
No 185
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=1.4e-16 Score=148.41 Aligned_cols=112 Identities=18% Similarity=0.330 Sum_probs=84.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|++ |+|-.+..... ...+|+|||.|||||++ ++ ..|+.++||||||++.|||++|. |
T Consensus 148 g~vkl~DfgVa~ql~~~~~--rr~tfvGTPfwMAPEVI------~~---------~~Y~~KADIWSLGITaiEla~GePP 210 (467)
T KOG0201|consen 148 GDVKLADFGVAGQLTNTVK--RRKTFVGTPFWMAPEVI------KQ---------SGYDTKADIWSLGITAIELAKGEPP 210 (467)
T ss_pred CcEEEEecceeeeeechhh--ccccccccccccchhhh------cc---------ccccchhhhhhhhHHHHHHhcCCCC
Confidence 678888 88877775543 24689999999999999 33 56889999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCcc-chHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEF-VSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
+....+...+++..++. .+.+...+ +++.+++..||.++|..||++.++.+.
T Consensus 211 ~s~~hPmrvlflIpk~~---------------------PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 211 HSKLHPMRVLFLIPKSA---------------------PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CcccCcceEEEeccCCC---------------------CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 98877764333332221 11122233 248899999999999999999887764
No 186
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.64 E-value=2.1e-15 Score=144.81 Aligned_cols=221 Identities=19% Similarity=0.255 Sum_probs=150.6
Q ss_pred EcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee---cCCEEEEeeCCCcEEEEECCCC-------ceeEEecC
Q 009274 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDG-------TLSCTMSG 380 (538)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~iwd~~~~-------~~~~~~~~ 380 (538)
++.-|.|-||+++.+.....-...... ....+..+.+ |...|+++++||.|++|.+..+ .+...+..
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l~---Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~ 675 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGLF---NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTI 675 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcccccccc---cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeec
Confidence 355689999999866543221111101 1122444544 4569999999999999998653 45667889
Q ss_pred CCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce
Q 009274 381 HKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM 457 (538)
Q Consensus 381 h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 457 (538)
|...|+++.|+ .+.|++++.|-+|++||+++++....+.+|.. .+.. ++|+|+|+.+++.+.||+|++|+.++..
T Consensus 676 h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtd-qIf~-~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 676 HGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTD-QIFG-IAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred ccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcC-ceeE-EEECCCCcceeeeecCceEEEeCCCCCC
Confidence 99999999999 67999999999999999999999989988754 4444 7999999999999999999999966544
Q ss_pred eeeccccceE----EEEEe--CCCEEEEEeCCC----eEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEE
Q 009274 458 KSMQTHKGSV----FAVFL--EGKWLFTGGWDK----TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGC 526 (538)
Q Consensus 458 ~~~~~h~~~v----~~~~~--~~~~l~sgs~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~ 526 (538)
+.+..-.+++ ..+.| +|+++++.+.|. .|.+||..+-.........-.......+-....+.+. +++|-
T Consensus 754 ~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGK 833 (1012)
T KOG1445|consen 754 QPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGK 833 (1012)
T ss_pred CccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecC
Confidence 4333222222 23334 999998888764 5888988754422221111111111112211222333 66788
Q ss_pred CCCeEEEEEc
Q 009274 527 ADRTVKVYYY 536 (538)
Q Consensus 527 ~dg~v~vw~~ 536 (538)
.|..|.+|++
T Consensus 834 GD~~v~~yEv 843 (1012)
T KOG1445|consen 834 GDRFVNMYEV 843 (1012)
T ss_pred CCceEEEEEe
Confidence 9999999986
No 187
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.64 E-value=2.2e-14 Score=138.74 Aligned_cols=264 Identities=19% Similarity=0.256 Sum_probs=177.0
Q ss_pred cEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 254 ~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
.|..++|. |..++.+. +..+.+||.++|..++++++|.+.|++++|+.++ ..+++|+.|..|.+|+-.-.. .+
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~klEG---~L 88 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEG---IL 88 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCC-ceeccCCCceeEEEecccccc---ee
Confidence 78899998 77777765 4479999999999999999999999999998855 577999999999999854221 11
Q ss_pred eeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEEC
Q 009274 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSL 409 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~ 409 (538)
+- .......++.|.|-...+++++- ...-+|........ ..+ ....+.+.+|. +.+++.|-.||+|.+-+.
T Consensus 89 kY----SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V~-K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 89 KY----SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSVS-KHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNK 161 (1081)
T ss_pred ee----ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhHH-hhh-hheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence 11 11133445667776778998876 45678876543322 211 24567778887 559999999999999875
Q ss_pred CCCceeEEEe--cCCCCceEEEEEEcCCC-----CEEEEEeCCCcEEEEeCC-cceeeeccccceEEEEE--eCCCEEEE
Q 009274 410 SDHSLLTVLE--EDSSGAVSSVLSLTAVQ-----HTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVF--LEGKWLFT 479 (538)
Q Consensus 410 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~l~~~~~dg~i~iwd~~-~~~~~~~~h~~~v~~~~--~~~~~l~s 479 (538)
. ++....+. +.....+.+ ++|+|+. ..+++.....++.+|.+. +.+..-+.-.-.-.|++ ++|.++..
T Consensus 162 ~-gEek~~I~Rpgg~Nspiws-i~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~Li 239 (1081)
T KOG1538|consen 162 N-GEEKVKIERPGGSNSPIWS-ICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILL 239 (1081)
T ss_pred C-CCcceEEeCCCCCCCCceE-EEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEE
Confidence 4 44333333 223344444 5777753 467777777788877743 32221111111223444 49999999
Q ss_pred EeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEc
Q 009274 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 480 gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~ 536 (538)
||.|+.+++|.-++-.+-. .+. ....+.+....|+++ ++.|+.||+|--|++
T Consensus 240 GGsdk~L~~fTR~GvrLGT----vg~-~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 240 GGSDKQLSLFTRDGVRLGT----VGE-QDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred ccCCCceEEEeecCeEEee----ccc-cceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 9999999999766543322 222 122334444556766 666999999988775
No 188
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.64 E-value=7.9e-16 Score=152.15 Aligned_cols=226 Identities=20% Similarity=0.288 Sum_probs=172.7
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 290 (538)
|-++.+...+..+++++.+..+++|. ..||.+.|+.++.+ +-+++++|.|..|++|.+.++.++..+.+
T Consensus 193 Vyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrg 272 (1113)
T KOG0644|consen 193 VYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRG 272 (1113)
T ss_pred eeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhc
Confidence 67888889999999999999999998 46999999999998 77889999999999999999999999999
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc-----------eee---------ecc-----cCCceeeeE
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP-----------LKK---------WNE-----EKDWRYSGI 345 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-----------~~~---------~~~-----~~~~~~~~~ 345 (538)
|++.|++++|+|- .+.+.||++++||.+-...... +.. +.. ....+...+
T Consensus 273 htgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~ 347 (1113)
T KOG0644|consen 273 HTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQ 347 (1113)
T ss_pred cccceeeeccCcc-----ccCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhH
Confidence 9999999999984 4788999999999872100000 000 000 000000001
Q ss_pred EEEeec-----------CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCC
Q 009274 346 HALTTS-----------GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 346 ~~~~~~-----------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~ 411 (538)
.++..+ ..+.+++-.+..+++|++.+|...+.+.+|...+..+.++ .....+++.||...|||+-.
T Consensus 348 l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~e 427 (1113)
T KOG0644|consen 348 LAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWE 427 (1113)
T ss_pred hhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeeccc
Confidence 111111 1244444556678899999999999999999999999998 34778999999999999999
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
|.+++.....+. .... ..|+++|..++....-|.++|...+
T Consensus 428 g~pik~y~~gh~-kl~d-~kFSqdgts~~lsd~hgql~i~g~g 468 (1113)
T KOG0644|consen 428 GIPIKHYFIGHG-KLVD-GKFSQDGTSIALSDDHGQLYILGTG 468 (1113)
T ss_pred CCcceeeecccc-eeec-cccCCCCceEecCCCCCceEEeccC
Confidence 988877765533 3333 4899999999998888999998644
No 189
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=1.7e-16 Score=151.55 Aligned_cols=129 Identities=21% Similarity=0.329 Sum_probs=89.2
Q ss_pred eeeeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 9 VTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
+|+++-|+= |+|..+..+.+.+..-+.+||+.|||||.+..-..+ .+.+...-+++.+|||||||||||+|+.|
T Consensus 493 lVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~----~~~~~~k~Ki~r~SDvWSLGCILYqMvYg 568 (677)
T KOG0596|consen 493 LVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSS----RENGKSKIKISRKSDVWSLGCILYQMVYG 568 (677)
T ss_pred EEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhcccc----ccCCCcceeecCccchhhhhhHHHHHHhc
Confidence 578888988 999999999877766689999999999998554333 12233455688999999999999999999
Q ss_pred C-ccchhh-hh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 87 E-QFTKEL-ID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 87 ~-pf~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+ ||...- .. .+..+-..++. | - .|+.+.. -++.++...||+.+|.+||+..++.+
T Consensus 569 ktPf~~~~n~~aKl~aI~~P~~~--I--e---------fp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 569 KTPFGQIINQIAKLHAITDPNHE--I--E---------FPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCchHHHHHHHHHHHhhcCCCcc--c--c---------ccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 9 997642 11 11111111110 0 0 1111111 01667888899999999999887655
No 190
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.63 E-value=4.3e-14 Score=145.74 Aligned_cols=260 Identities=13% Similarity=0.165 Sum_probs=174.4
Q ss_pred EeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC-cceeeec-ccCCceeeeEEEEeecCCE
Q 009274 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-EPLKKWN-EEKDWRYSGIHALTTSGRY 354 (538)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 354 (538)
|+. .|..+..+..|+..|..++.++....+|++|+.||+|++||...-... ...+... -...........+.+.++.
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 443 477888888999999999999988899999999999999998754332 1111110 0101122234566678889
Q ss_pred EEEeeCCCcEEEEECCCCc-------eeEEecCC-CCCeEEE-EEe---CC-EEEEEecCCcEEEEECCCCceeEEEecC
Q 009274 355 LYTGSGDRTIKAWSLLDGT-------LSCTMSGH-KSAVSTL-AVC---NG-VLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 355 l~sg~~dg~i~iwd~~~~~-------~~~~~~~h-~~~v~~l-~~~---~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 421 (538)
+|+++.||.|++.++...+ .......+ .+.+.++ ++. .. .++.+..-+.|..||++......+++..
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 9999999999999987521 11122222 2333333 343 33 7788888899999999998877777665
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeecc-ccceEEEE--Ee---CCCEEEEEeC--CCeEEEEec
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQT-HKGSVFAV--FL---EGKWLFTGGW--DKTVSVQEL 491 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~-h~~~v~~~--~~---~~~~l~sgs~--dg~v~iwd~ 491 (538)
......+.++.+|.+++++.|+..|.+.+||++ .++..+.. +..++..+ ++ .....++++. .+.|.+|++
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeec
Confidence 544455557999999999999999999999965 45555532 44566554 33 2355555554 678999999
Q ss_pred CCCeeEeeeecCCc-------ccC---------CCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 492 AGDEFEEDVIPTGA-------IPC---------GSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 492 ~~~~~~~~~~~~~~-------~~~---------~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.++.....+..... .+. .....++.-.++.+++|+.|+.|+.||..
T Consensus 1273 ~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1273 ETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred ccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 98865444332200 011 11222333346778999999999999974
No 191
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=8.5e-15 Score=139.34 Aligned_cols=234 Identities=15% Similarity=0.205 Sum_probs=155.2
Q ss_pred eeeeccCcceeEEeecCCeEE-----------------EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC---
Q 009274 224 QARAAGGVKDLVNGLSKGNVK-----------------FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD--- 281 (538)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-----------------i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~--- 281 (538)
...+.+....++++..++.+. +++|.+|.++|.|+++. +.++++|+.||+|+.|++..
T Consensus 299 ~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~d 378 (577)
T KOG0642|consen 299 ALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQD 378 (577)
T ss_pred hhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCC
Confidence 344455566677777666644 56678999999999998 99999999999999996531
Q ss_pred -------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEe-ecCC
Q 009274 282 -------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT-TSGR 353 (538)
Q Consensus 282 -------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 353 (538)
......+.||.+.|+.+++++... .|++++.||++++|+...... ..+.......+...+.+. ....
T Consensus 379 p~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~-~Llscs~DgTvr~w~~~~~~~----~~f~~~~e~g~Plsvd~~ss~~a 453 (577)
T KOG0642|consen 379 PDDSYDPSVLSGTLLGHTDAVWLLALSSTKD-RLLSCSSDGTVRLWEPTEESP----CTFGEPKEHGYPLSVDRTSSRPA 453 (577)
T ss_pred cccccCcchhccceeccccceeeeeeccccc-ceeeecCCceEEeeccCCcCc----cccCCccccCCcceEeeccchhH
Confidence 133467789999999999988544 579999999999999865433 111111111111111111 1112
Q ss_pred EEEEeeCCCcEEEEECCCCceeEEecCC-------CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCC
Q 009274 354 YLYTGSGDRTIKAWSLLDGTLSCTMSGH-------KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG 424 (538)
Q Consensus 354 ~l~sg~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 424 (538)
..++...-+.-.+++......+..+... ...+.-+.++ .++.+++..|+.|+++|..+++++.....+..
T Consensus 454 ~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~- 532 (577)
T KOG0642|consen 454 HSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKD- 532 (577)
T ss_pred hhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccc-
Confidence 2332222233333344443333333211 1345556666 45999999999999999999999988877643
Q ss_pred ceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeecccc
Q 009274 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHK 464 (538)
Q Consensus 425 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~ 464 (538)
. .+.+++.|+|.+|++++.|+.+++|... .++.....|.
T Consensus 533 s-vtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 533 S-VTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred e-ecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 2 3347999999999999999999999854 3444444443
No 192
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.62 E-value=6.1e-13 Score=129.58 Aligned_cols=265 Identities=14% Similarity=0.163 Sum_probs=158.7
Q ss_pred EEEEeCCCcEEEEeCCC-Cc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCce
Q 009274 265 LFSSSFDKSIHVWSLKD-FS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (538)
Q Consensus 265 l~s~s~dg~i~iwd~~~-~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (538)
+++...|+.|++||+.+ ++ .+..++ +.+....++++|+++.+++++..++.|.+|+++............... .
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~--~ 81 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPG--S 81 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCC--C
Confidence 34447799999999964 33 445554 345677889999776666666678999999997322111122111111 1
Q ss_pred eeeEEEEeecCCEEEEeeC-CCcEEEEECCC-C---ceeEEecCCCCCeEEEEEe--CCEEE-EEecCCcEEEEECCCCc
Q 009274 342 YSGIHALTTSGRYLYTGSG-DRTIKAWSLLD-G---TLSCTMSGHKSAVSTLAVC--NGVLY-SGSRDGTIRLWSLSDHS 413 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~~-~---~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~ 413 (538)
..-+.++++++++++++. ++.|.+||+.+ + +.+..+. +.....+++++ +++++ +...++.|.+||+.+..
T Consensus 82 -p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g 159 (330)
T PRK11028 82 -PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG 159 (330)
T ss_pred -ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence 124678899998887764 88999999964 2 2233333 22345677788 34664 55567999999997643
Q ss_pred eeE-----EEecCCCCceEEEEEEcCCCCEEEEEeC-CCcEEEEeCCc------ceeeecccc------ceE--EEEEeC
Q 009274 414 LLT-----VLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK------FMKSMQTHK------GSV--FAVFLE 473 (538)
Q Consensus 414 ~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~------~~~~~~~h~------~~v--~~~~~~ 473 (538)
.+. ......... ...+.++|++++++++.. ++.|.+||... ..+.+..+. ... ..++++
T Consensus 160 ~l~~~~~~~~~~~~g~~-p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pd 238 (330)
T PRK11028 160 HLVAQEPAEVTTVEGAG-PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPD 238 (330)
T ss_pred cccccCCCceecCCCCC-CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCC
Confidence 221 111111111 223689999999988876 89999999642 122222211 111 234569
Q ss_pred CCEEEEEeC-CCeEEEEecCCCee-EeeeecCCcccCCCceEEEEEeCC-EEEEEE-CCCeEEEEEcC
Q 009274 474 GKWLFTGGW-DKTVSVQELAGDEF-EEDVIPTGAIPCGSVITALLYWQG-KLFVGC-ADRTVKVYYYG 537 (538)
Q Consensus 474 ~~~l~sgs~-dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~-~dg~v~vw~~~ 537 (538)
+++++++.. ++.|.+|++..... ......... ...+....+.+++ +|+++. .+++|.+|+++
T Consensus 239 g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~--~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 239 GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT--ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec--cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 999988864 78999999964321 111111110 0112223344555 466655 48999999874
No 193
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.62 E-value=2.5e-13 Score=136.11 Aligned_cols=312 Identities=14% Similarity=0.178 Sum_probs=205.2
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEE-------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKD-------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~-------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
+.+...++.+..++++..+|.+.+|. +.-|.+.|++++|+ |.+|+||+..|.+.+|.+++++ .+
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kq 286 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQ 286 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cc
Confidence 56788889999999999999999986 44588999999999 9999999999999999999988 55
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc------CCceeeeEEEEeecCCEEEEeeC
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE------KDWRYSGIHALTTSGRYLYTGSG 360 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~sg~~ 360 (538)
-++.-.++|..+.++|++. +.+....|..|.+....+......+...... .........++.|..+.++-.+.
T Consensus 287 fLPRLgs~I~~i~vS~ds~-~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~ 365 (792)
T KOG1963|consen 287 FLPRLGSPILHIVVSPDSD-LYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGH 365 (792)
T ss_pred cccccCCeeEEEEEcCCCC-eEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCC
Confidence 5666788999999998666 4466677999999887554433333333222 11123345677776778888889
Q ss_pred CCcEEEEECCCCceeEEec-----CCCC------CeEEEEEe--CCEEEEEe--------cC--CcEEEEECCCCc----
Q 009274 361 DRTIKAWSLLDGTLSCTMS-----GHKS------AVSTLAVC--NGVLYSGS--------RD--GTIRLWSLSDHS---- 413 (538)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~-----~h~~------~v~~l~~~--~~~l~s~s--------~d--g~i~iwd~~~~~---- 413 (538)
.|.|.+||+.+.+.+..+. .+.+ .++.++.+ ++++++.- .| -.+++|-.....
T Consensus 366 ~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~ 445 (792)
T KOG1963|consen 366 PGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFI 445 (792)
T ss_pred CceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeE
Confidence 9999999998877665542 1222 34555544 55666653 23 357888665433
Q ss_pred eeEEEecCCCCceEEEEEEcCCC-CEEEEEeCCCcEEEEeC------Cc------ceeeeccccceEEEEEe--CCCEEE
Q 009274 414 LLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRN------DK------FMKSMQTHKGSVFAVFL--EGKWLF 478 (538)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~------~~------~~~~~~~h~~~v~~~~~--~~~~l~ 478 (538)
+...+..+|.......+..++.. ...++++.||.+++|-. .+ +...-..|..++.+.+| || .++
T Consensus 446 L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG-sll 524 (792)
T KOG1963|consen 446 LNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG-SLL 524 (792)
T ss_pred EEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC-cEE
Confidence 34444445544444433444443 38999999999999953 11 11222237788888888 55 666
Q ss_pred EEeCCCeEEEEecCCC-eeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 479 TGGWDKTVSVQELAGD-EFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 479 sgs~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
+.+.|++|.+||..+. .+... ......+........-......+.....+.+.+|++.
T Consensus 525 a~s~~~~Itiwd~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll 583 (792)
T KOG1963|consen 525 AVSFDDTITIWDYDTKNELLCT-EGSRNWPIAELLFTAQTQNDGALVHATQQRLSVWNLL 583 (792)
T ss_pred EEecCCEEEEecCCChhhhhcc-ccccccchHhHhhhcccccccceeeccCceEehHhhh
Confidence 7778899999999883 32211 1111111222222222222233444556677888763
No 194
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.62 E-value=9.7e-14 Score=138.69 Aligned_cols=240 Identities=17% Similarity=0.187 Sum_probs=165.8
Q ss_pred CCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCce--EEEE----ecCCcCeEEEEEecCCC-CEEEEEcCCCcEEEEE
Q 009274 252 RDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH--VHTF----KGHDHKVMAVVYVDEDQ-PLCISGDSGGGIFVWS 321 (538)
Q Consensus 252 ~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~--~~~~----~~h~~~v~~l~~~~~~~-~~l~s~~~dg~i~vwd 321 (538)
..+|+|++|+ ..+++.|..+|.|.+||+..+.. ...+ ..|..++..+.|..+.. .-+++++.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 4789999998 89999999999999999986654 2222 35889999999985322 3468888899999998
Q ss_pred ccCCCCCcceeeeccc-------CCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCC--------ceeEEecCCCCCe
Q 009274 322 FSFPLGHEPLKKWNEE-------KDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDG--------TLSCTMSGHKSAV 385 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v 385 (538)
++.-............ ..........|.+ +.+.+++|+.+|.|..-+-... +....+..|.++|
T Consensus 322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v 401 (555)
T KOG1587|consen 322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV 401 (555)
T ss_pred ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence 7753321111111100 1112222334444 5669999999999987443221 1233556788999
Q ss_pred EEEEEe---CCEEEEEecCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCC-CEEEEEeCCCcEEEEeCC----cc
Q 009274 386 STLAVC---NGVLYSGSRDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRND----KF 456 (538)
Q Consensus 386 ~~l~~~---~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~----~~ 456 (538)
+++.++ ...+++++ |.++++|.-. ...++..+..+. ..+.. ++|||.. ..++++..||.+.+||+. .+
T Consensus 402 ~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~-~~v~~-vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P 478 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSP-DYVTD-VAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP 478 (555)
T ss_pred EeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhcc-ceeee-eEEcCcCceEEEEEcCCCceehhhhhccccCC
Confidence 999988 44555555 9999999987 555665555432 22333 6899865 577788889999999954 35
Q ss_pred eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 457 MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 457 ~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
..+...+......+.+ +|+.|+.|...|++++|++...
T Consensus 479 v~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 479 VLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred cccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 5555555444455555 6999999999999999999643
No 195
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=1.8e-16 Score=146.33 Aligned_cols=116 Identities=20% Similarity=0.273 Sum_probs=79.9
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
.-|+. |+|+... ++.+|.++||||.|.|||++ ++-. ...++.+.|+|||||+||-+|+|. ||
T Consensus 317 llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl------~~kg------~~~~~~kVDiWSlGcvLfvcLsG~pPF 381 (475)
T KOG0615|consen 317 LLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVL------ASKG------VEYYPSKVDIWSLGCVLFVCLSGYPPF 381 (475)
T ss_pred EEEecccchhhccc---cceehhhhcCCccccChhhe------ecCC------eecccchheeeeccceEEEEeccCCCc
Confidence 34666 7777776 34578999999999999999 3311 122234789999999999999999 99
Q ss_pred chhhhhh-eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
....... +.-+..+.. +..-++.|.+ +++. ..+++.++|..+|+.||++.+..+
T Consensus 382 S~~~~~~sl~eQI~~G~-----y~f~p~~w~~-Isee-----------a~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 382 SEEYTDPSLKEQILKGR-----YAFGPLQWDR-ISEE-----------ALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ccccCCccHHHHHhcCc-----ccccChhhhh-hhHH-----------HHHHHHHhhEeCcccCcCHHHHhc
Confidence 9864442 221111111 2333444443 4443 456999999999999999887665
No 196
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=3e-16 Score=152.25 Aligned_cols=109 Identities=18% Similarity=0.343 Sum_probs=78.4
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
-||| |||-+++..+.- -.++||||.|+|||++. +...+..+||||+||+||.||+|+ ||+
T Consensus 157 VKIgDFGLAt~le~~~Er--k~TlCGTPNYIAPEVl~---------------k~gHsfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 157 VKIGDFGLATQLEYDGER--KKTLCGTPNYIAPEVLN---------------KSGHSFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred EEecccceeeeecCcccc--cceecCCCcccChhHhc---------------cCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence 5899 899888855332 44799999999999992 234567899999999999999999 999
Q ss_pred hhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 91 KELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
..+.+.+. +++.. ...+|.. -..+.+++|.++|..+|..||++.++.+.
T Consensus 220 tk~vkety~~Ik~~-------~Y~~P~~---------------ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 220 TKTVKETYNKIKLN-------EYSMPSH---------------LSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cchHHHHHHHHHhc-------Ccccccc---------------cCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 87555333 11100 0000110 11236789999999999999999887763
No 197
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.6e-13 Score=139.41 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=154.7
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCC-
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLD- 371 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~- 371 (538)
+-..+.|+|-. ..+++++..-.|++||.+.+.....+........ ......-+.- |...+++|+.||.|+||+-..
T Consensus 1066 ~pk~~~~hpf~-p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t-~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1066 PPKTLKFHPFE-PQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDT-RVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCceeeecCCC-ceeEEcCCcceEEEEecccCceeccccCCCCCCC-ccceeeeecccchhheeeeccCceEEEeccccc
Confidence 34566676643 4567787788999999987655333322221111 1122222222 334899999999999997532
Q ss_pred ----CceeEEecC-------CCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 009274 372 ----GTLSCTMSG-------HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 372 ----~~~~~~~~~-------h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
.+.+..+.+ ..+.=.-+.|. .++|++++.-..|+|||......+..+.......++...+-...|+.
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~ 1223 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNI 1223 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCce
Confidence 233333322 11111334555 66888888889999999998888887776544444433333455899
Q ss_pred EEEEeCCCcEEEEeCC-----cceeeeccccce--EEEEEe--CCC-EEEEEeCCCeEEEEecCCCeeEeeeecCCcccC
Q 009274 439 LVVSHESGSIKVWRND-----KFMKSMQTHKGS--VFAVFL--EGK-WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPC 508 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~-----~~~~~~~~h~~~--v~~~~~--~~~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~ 508 (538)
+++|..||.|++||.+ ..+..++.|+.. |..+++ .|- .|++|+.||.|++||++.............-.-
T Consensus 1224 i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y 1303 (1387)
T KOG1517|consen 1224 IAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY 1303 (1387)
T ss_pred EEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc
Confidence 9999999999999954 367778889887 888877 333 599999999999999998532222221111112
Q ss_pred CCceEEEEEe-CCE-EEEEECCCeEEEEEcC
Q 009274 509 GSVITALLYW-QGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 509 ~~~~~~~~~~-~~~-l~sg~~dg~v~vw~~~ 537 (538)
++..+++..+ ... +++|+. +.|+||++.
T Consensus 1304 Gs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1304 GSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred CccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence 3346666665 333 555666 999999974
No 198
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.59 E-value=4.8e-16 Score=142.26 Aligned_cols=100 Identities=18% Similarity=0.161 Sum_probs=70.6
Q ss_pred cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhh
Q 009274 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (538)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~ 96 (538)
||++.-...+.+ .+++|||+.|||||++ .+ ..|+..+|.||||++|||||+|. ||.+.+...
T Consensus 170 gL~k~~~~~~~~--t~tfcGT~eYmAPEil------~~---------~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 170 GLCKEDLKDGDA--TRTFCGTPEYMAPEIL------LG---------KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred ccchhcccCCCc--cccccCCccccChHHH------hc---------CCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 788765555443 6789999999999999 43 67889999999999999999999 999987663
Q ss_pred eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
+.....+.. ...++ .....+..+++.+.|.++|.+|-.
T Consensus 233 ~~~~I~~~k-----~~~~p---------------~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 233 MYDKILKGK-----LPLPP---------------GYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred HHHHHhcCc-----CCCCC---------------ccCCHHHHHHHHHHhccCHHHhcC
Confidence 331000000 00000 112223667999999999999963
No 199
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.57 E-value=2.6e-12 Score=116.60 Aligned_cols=232 Identities=16% Similarity=0.165 Sum_probs=159.1
Q ss_pred cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC--cEEEEECC
Q 009274 293 HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR--TIKAWSLL 370 (538)
Q Consensus 293 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~iwd~~ 370 (538)
..+....|.. +..++..|+.||. ++++.+.-.. ..+.......++..-.+..+++..+.+. .+++++.+
T Consensus 6 ~ti~~~~~Nq-d~~~lsvGs~~Gy-k~~~~~~~~k-------~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~K 76 (391)
T KOG2110|consen 6 PTINFIGFNQ-DSTLLSVGSKDGY-KIFSCSPFEK-------CFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFK 76 (391)
T ss_pred cceeeeeecc-ceeEEEccCCCce-eEEecCchHH-------hhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcc
Confidence 3455555643 4556667777664 5666543221 1111112233555666677777666654 49999998
Q ss_pred CCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEe--CCC
Q 009274 371 DGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSH--ESG 446 (538)
Q Consensus 371 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~--~dg 446 (538)
.+..+..+. ...+|.++.++.+.|+++-.+. |+|||+++.+.++++....+.. ...+++++ .+.+++--+ ..|
T Consensus 77 k~~~ICe~~-fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~-~gl~AlS~n~~n~ylAyp~s~t~G 153 (391)
T KOG2110|consen 77 KKTTICEIF-FPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNP-KGLCALSPNNANCYLAYPGSTTSG 153 (391)
T ss_pred cCceEEEEe-cCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCc-cceEeeccCCCCceEEecCCCCCc
Confidence 888777775 5678999999977777776655 9999999999999987652222 22245555 445777533 468
Q ss_pred cEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCCCe-EEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE
Q 009274 447 SIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKT-VSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK 521 (538)
Q Consensus 447 ~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (538)
.|.+||..+ ....+..|.+++.+++| +|.+|||+|+.|+ ||||.+.+++....+..... ........|.+++.
T Consensus 154 dV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~--~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 154 DVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY--PVSIYSLSFSPDSQ 231 (391)
T ss_pred eEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce--eeEEEEEEECCCCC
Confidence 999999654 67788999999999987 9999999999997 69999998887655543221 23344445556666
Q ss_pred -EEEEECCCeEEEEEcCC
Q 009274 522 -LFVGCADRTVKVYYYGK 538 (538)
Q Consensus 522 -l~sg~~dg~v~vw~~~~ 538 (538)
|.+.+..++|++|++++
T Consensus 232 ~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 232 FLAASSNTETVHIFKLEK 249 (391)
T ss_pred eEEEecCCCeEEEEEecc
Confidence 45577889999999864
No 200
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.57 E-value=1.2e-15 Score=139.70 Aligned_cols=114 Identities=21% Similarity=0.359 Sum_probs=80.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+=-|+. |+|+++-+- ...+++||..|||||.+ .| ..|+.++||||||.+++||.+|+ |
T Consensus 216 GeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi------~g---------~~Ys~~sDIWSLGLsllE~a~GrfP 276 (364)
T KOG0581|consen 216 GEVKICDFGVSGILVNS----IANTFVGTSAYMSPERI------SG---------ESYSVKSDIWSLGLSLLELAIGRFP 276 (364)
T ss_pred CCEEeccccccHHhhhh----hcccccccccccChhhh------cC---------CcCCcccceecccHHHHHHhhCCCC
Confidence 344666 777666543 24579999999999999 66 68889999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCc-c-chHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSE-F-VSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+.. ..+..+...+...+.+..+.. + +++...+..||.++|..||++.++..
T Consensus 277 ~~~~~~~~----------------~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 277 YPPPNPPY----------------LDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCcCCCC----------------CCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 98752210 011111122222223333332 3 45889999999999999999888765
No 201
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.57 E-value=6.6e-16 Score=143.76 Aligned_cols=117 Identities=14% Similarity=0.220 Sum_probs=75.7
Q ss_pred eeeeeec--cccccccc-cchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 11 KSVAKVG--CVGSRICD-KEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~-~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
++.+|++ |++++... .........+.|||.|||||++ ++ .....+++|||||||+++||+||.
T Consensus 154 ~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi------~~--------g~~~~~~sDiWSlGCtVvEM~Tg~ 219 (313)
T KOG0198|consen 154 NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVI------RN--------GEVARRESDIWSLGCTVVEMLTGK 219 (313)
T ss_pred CCeEEeccCccccccccccccccccccccCCccccCchhh------cC--------CCcCCccchhhhcCCEEEeccCCC
Confidence 5799999 66666663 1222224469999999999999 31 022336999999999999999999
Q ss_pred -ccchh-hhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 -QFTKE-LID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 -pf~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||... ... .+.. +... ...|.+|. .-.....+.+.+|+.++|.+||++.++++.
T Consensus 220 ~PW~~~~~~~~~~~~-----------ig~~-----~~~P~ip~----~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 220 PPWSEFFEEAEALLL-----------IGRE-----DSLPEIPD----SLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CcchhhcchHHHHHH-----------Hhcc-----CCCCCCCc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 98862 111 0110 0000 00111110 011136789999999999999999988774
No 202
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.57 E-value=1.4e-11 Score=122.31 Aligned_cols=279 Identities=12% Similarity=0.096 Sum_probs=178.8
Q ss_pred CeEEEEEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 241 GNVKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 241 ~~~~i~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
....+|..+-...........++.++.++.|+.+..+|.++|+.+............... .+..++.++.+|.++.|
T Consensus 84 tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v---~~~~v~v~~~~g~l~a~ 160 (377)
T TIGR03300 84 TGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLV---ANGLVVVRTNDGRLTAL 160 (377)
T ss_pred CCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEE---ECCEEEEECCCCeEEEE
Confidence 334567665444433445556888999999999999999999998876543321111222 12356667789999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----------CeEEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----------AVSTLA 389 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~l~ 389 (538)
|.++++................ .. .....+..++.+..+|.+..+|.++|+.++....... ...+..
T Consensus 161 d~~tG~~~W~~~~~~~~~~~~~-~~-sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~ 238 (377)
T TIGR03300 161 DAATGERLWTYSRVTPALTLRG-SA-SPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPV 238 (377)
T ss_pred EcCCCceeeEEccCCCceeecC-CC-CCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccE
Confidence 9988765433322111000000 00 0111235778888899999999999988776432110 011233
Q ss_pred EeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccc-cce
Q 009274 390 VCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTH-KGS 466 (538)
Q Consensus 390 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h-~~~ 466 (538)
+.++.++.++.+|.++.||..+++.+....... . ......+..+++++.||.++.+|..+ .+...... ...
T Consensus 239 ~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~--~----~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~ 312 (377)
T TIGR03300 239 VDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS--Y----QGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQ 312 (377)
T ss_pred EECCEEEEEEcCCEEEEEECCCCcEEEeeccCC--c----cCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCc
Confidence 447889999999999999999998877665221 1 11223467888888999999999543 33332111 112
Q ss_pred EEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEE
Q 009274 467 VFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVY 534 (538)
Q Consensus 467 v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw 534 (538)
..+....+..+++++.+|.++++|..+++......... ..........++.|+.++.||.|+.|
T Consensus 313 ~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~----~~~~~sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 313 LTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDG----SGIASPPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred cccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC----CccccCCEEECCEEEEEeCCceEEEe
Confidence 22223367899999999999999999998876655332 11223334557889999999999876
No 203
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.56 E-value=2.1e-13 Score=119.57 Aligned_cols=188 Identities=12% Similarity=0.198 Sum_probs=138.6
Q ss_pred cCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCce---EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 250 GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH---VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 250 ~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
.|..++++..|+ .+++.++|-|-+..|||++++.. ...+-.|..+|..++|...+..+|++.+.||.++++|++
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 467899999998 89999999999999999998633 566778999999999999888999999999999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeec---CCEEEEeeCC-CcEEEEECCC-CceeEEecCCCCCeEEEEEe---CCEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGD-RTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC---NGVL 395 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~d-g~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~---~~~l 395 (538)
...-...+..-... ......++++ .+++++-..| ..|.+.|++. ..++..+++|.+.|+.++|. ...+
T Consensus 228 ~leHSTIIYE~p~~----~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hi 303 (364)
T KOG0290|consen 228 SLEHSTIIYEDPSP----STPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHI 303 (364)
T ss_pred ccccceEEecCCCC----CCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCcee
Confidence 65433222221111 1223444443 4477765544 5799999986 45788999999999999998 4599
Q ss_pred EEEecCCcEEEEECCCCce------eEEEecCCCCceEEEEEEcC-CCCEEEEEeC
Q 009274 396 YSGSRDGTIRLWSLSDHSL------LTVLEEDSSGAVSSVLSLTA-VQHTLVVSHE 444 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 444 (538)
++|+.|..+.+||+.+.-. +..... .+.+.. +.|++ .+..++.+..
T Consensus 304 ctaGDD~qaliWDl~q~~~~~~~dPilay~a--~~EVNq-i~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 304 CTAGDDCQALIWDLQQMPRENGEDPILAYTA--GGEVNQ-IQWSSSQPDWIAICFG 356 (364)
T ss_pred eecCCcceEEEEecccccccCCCCchhhhhc--cceeee-eeecccCCCEEEEEec
Confidence 9999999999999975322 111111 222333 56664 4567766654
No 204
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.56 E-value=8.3e-13 Score=120.28 Aligned_cols=268 Identities=10% Similarity=0.057 Sum_probs=188.9
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEee----------------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQ----------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD 281 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~----------------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~ 281 (538)
..++...++.+++.++++..+...++|.+. .|...|.|++|+ +..+++|..+++|.+.|+++
T Consensus 57 GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt 136 (609)
T KOG4227|consen 57 GCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET 136 (609)
T ss_pred cccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc
Confidence 347788899999999999999999999842 367899999999 78899999999999999999
Q ss_pred CceEEEEec--CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC-cceeeecccCCceeeeEEEEeec-CCEEEE
Q 009274 282 FSHVHTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTTS-GRYLYT 357 (538)
Q Consensus 282 ~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s 357 (538)
.+.+..+.. ..+.|+.+..+|. .+.+++.+.++.|.+||.+..... ..+...+....++ ...|.|. ..+|++
T Consensus 137 ~qsi~V~~~~~~~~~VY~m~~~P~-DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~---t~~F~P~~P~Li~~ 212 (609)
T KOG4227|consen 137 KQSIYVANENNNRGDVYHMDQHPT-DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFY---TAEFHPETPALILV 212 (609)
T ss_pred ceeeeeecccCcccceeecccCCC-CceEEEEecCceEEEEeccCCCCCCceeeecCCCccce---eeeecCCCceeEEe
Confidence 988877653 2358999999997 557799999999999999865532 2222222222221 2345553 558999
Q ss_pred eeCCCcEEEEECCCCc-eeEEe---cCCCC---CeEEEEEe--CCEEEEEecCCcEEEEECCCCcee-EEEecCCCCce-
Q 009274 358 GSGDRTIKAWSLLDGT-LSCTM---SGHKS---AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL-TVLEEDSSGAV- 426 (538)
Q Consensus 358 g~~dg~i~iwd~~~~~-~~~~~---~~h~~---~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~- 426 (538)
.+..+-+.+||.+... ++... .+-.. .-.++.|+ ++.+++--....-.+||+-+..+. .++.....+..
T Consensus 213 ~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N 292 (609)
T KOG4227|consen 213 NSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCN 292 (609)
T ss_pred ccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCccee
Confidence 9999999999987543 22211 11111 22566777 556666666666678888775543 23322211211
Q ss_pred ---EEEEEEcCCCCEEEEEeCCCcEEEEeCC-------------------------cceeeeccccceEEEEEe--CCCE
Q 009274 427 ---SSVLSLTAVQHTLVVSHESGSIKVWRND-------------------------KFMKSMQTHKGSVFAVFL--EGKW 476 (538)
Q Consensus 427 ---~~~~~~~~~~~~l~~~~~dg~i~iwd~~-------------------------~~~~~~~~h~~~v~~~~~--~~~~ 476 (538)
...++|-. ...+++|+.+-.|++|.+. +....+++|.+-+..+.| ...+
T Consensus 293 ~~T~KS~~F~~-D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~ 371 (609)
T KOG4227|consen 293 IKTIKSMTFID-DYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNL 371 (609)
T ss_pred eeeeeeeeeec-ceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcce
Confidence 11234443 3459999999999999632 124567889998888887 6678
Q ss_pred EEEEeCCCeEEEEecC
Q 009274 477 LFTGGWDKTVSVQELA 492 (538)
Q Consensus 477 l~sgs~dg~v~iwd~~ 492 (538)
|++.+-.+.+++|...
T Consensus 372 l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 372 LVSSGVENSFKLWSDH 387 (609)
T ss_pred Eeccchhhheeccccc
Confidence 8899999999999754
No 205
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.55 E-value=1.1e-13 Score=133.25 Aligned_cols=231 Identities=13% Similarity=0.140 Sum_probs=157.8
Q ss_pred cCCEEEE--EeCCCcEEEEeCCC-CceE----EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceee
Q 009274 261 GGGFLFS--SSFDKSIHVWSLKD-FSHV----HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK 333 (538)
Q Consensus 261 ~~~~l~s--~s~dg~i~iwd~~~-~~~~----~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 333 (538)
+..+++. ++.-|.|-||++.. |+.. -.+. ....|+++.|.|-+...++.++.||.|++|.+..+........
T Consensus 590 n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~t 668 (1012)
T KOG1445|consen 590 NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMT 668 (1012)
T ss_pred ccceEEEEecCCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCC
Confidence 3444443 35578999999864 3221 1121 4567999999998888899999999999999987654333222
Q ss_pred ----ecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEE
Q 009274 334 ----WNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRL 406 (538)
Q Consensus 334 ----~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~i 406 (538)
...+.. ......|+| ..+.|++++.|.+|++||+++++....+.+|.+.|.+++|+ +..+++.+.||+|++
T Consensus 669 Pe~~lt~h~e--KI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV 746 (1012)
T KOG1445|consen 669 PEKILTIHGE--KITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV 746 (1012)
T ss_pred cceeeecccc--eEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence 222221 112234444 35689999999999999999999999999999999999999 669999999999999
Q ss_pred EECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEEEeCC----CcEEEEeCCcc----eeee--ccccc-eEEEEEeC-
Q 009274 407 WSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDKF----MKSM--QTHKG-SVFAVFLE- 473 (538)
Q Consensus 407 wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~----~~~~--~~h~~-~v~~~~~~- 473 (538)
|+.++++. ++.-.+.. +.....+.|.-+|+++++.+.| +.|.+||..+. +.+. ....+ -|-...+|
T Consensus 747 y~Prs~e~pv~Eg~gpv-gtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds 825 (1012)
T KOG1445|consen 747 YEPRSREQPVYEGKGPV-GTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDS 825 (1012)
T ss_pred eCCCCCCCccccCCCCc-cCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCC
Confidence 99988754 33333332 2233335778889998887765 56788874432 2211 11111 11122233
Q ss_pred CCEEEEEeCCCeEEEEecCCCe
Q 009274 474 GKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 474 ~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+-++++|-.|..|++|.+-...
T Consensus 826 ~~lfltGKGD~~v~~yEv~~es 847 (1012)
T KOG1445|consen 826 NVLFLTGKGDRFVNMYEVIYES 847 (1012)
T ss_pred ceEEEecCCCceEEEEEecCCC
Confidence 4577888889999999986543
No 206
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.54 E-value=1e-13 Score=131.36 Aligned_cols=163 Identities=23% Similarity=0.393 Sum_probs=121.7
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd 321 (538)
..|.||++.|+|++|+ |.+|++||.|-.+.|||.-..+.++.+. +|...|.++.|.|. ++.++++|..|..|+++|
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 4589999999999999 9999999999999999999888887764 79999999999985 556788999999999999
Q ss_pred ccCCCCC-------cceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCce-e------E---EecCCCC
Q 009274 322 FSFPLGH-------EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTL-S------C---TMSGHKS 383 (538)
Q Consensus 322 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~-~------~---~~~~h~~ 383 (538)
+...+.. .+...+..+.. .. .-.+..|++ +.+.+++.||+|+-+|++.... . . .+....-
T Consensus 124 l~~~~~~~~d~~~~~~~~~~~cht~-rV-Kria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 124 LDSSKEGGMDHGMEETTRCWSCHTD-RV-KRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred cccccccccccCccchhhhhhhhhh-hh-hheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 9853322 12222222211 01 112445555 6999999999999999986321 1 1 1111223
Q ss_pred CeEEEEEe---CCEEEEEecCCcEEEEECC
Q 009274 384 AVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 384 ~v~~l~~~---~~~l~s~s~dg~i~iwd~~ 410 (538)
...|+..+ +.+|++|+.|--.++||.+
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 45677887 5599999999999999954
No 207
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.54 E-value=2.5e-15 Score=132.30 Aligned_cols=118 Identities=16% Similarity=0.080 Sum_probs=73.4
Q ss_pred eeeeccccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccch
Q 009274 13 VAKVGCVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (538)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~ 91 (538)
..|+-|+++..... ...||+.|||||++ .+ ..+++++|||||||+||||+||+ ||..
T Consensus 49 ~~~~fG~~~~~~~~-------~~~g~~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 49 LLKLDGSVAFKTPE-------QSRVDPYFMAPEVI------QG---------QSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred ceeeccceEeeccc-------cCCCcccccChHHh------cC---------CCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 45556666655432 23799999999999 44 56789999999999999999999 9975
Q ss_pred hhhh-hee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 92 ELID-YIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 92 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
.... ... .+. . . ........+........ ...+.+++.+||..+|.+||++.++.......
T Consensus 107 ~~~~~~~~~~~~-~-~-----~~~~~~~~~~~~~~~~~------~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 107 ERELSAILEILL-N-G-----MPADDPRDRSNLESVSA------ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred cchhcHHHHHHH-H-H-----hccCCccccccHHHHHh------hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 4221 000 000 0 0 00000000000000000 01378899999999999999999887765443
No 208
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.53 E-value=2.4e-15 Score=139.07 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=60.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
-+.||+ |+||-+.+... ..++||||-|||||++ ...+|+.|+|+||+|++||+|++|+ |
T Consensus 152 ~~LKIADFGfAR~L~~~~~---a~tlcGSplYMAPEV~---------------~~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQPGSM---AETLCGSPLYMAPEVI---------------MSQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred ceEEecccchhhhCCchhH---HHHhhCCccccCHHHH---------------HhccccchhhHHHHHHHHHHHHhCCCC
Confidence 578999 89999998765 5689999999999999 2367889999999999999999999 9
Q ss_pred cchhhhhhee
Q 009274 89 FTKELIDYIR 98 (538)
Q Consensus 89 f~~~~~~~~~ 98 (538)
|++.++..+.
T Consensus 214 f~a~t~~eL~ 223 (429)
T KOG0595|consen 214 FDAETPKELL 223 (429)
T ss_pred ccccCHHHHH
Confidence 9998777444
No 209
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.53 E-value=2e-12 Score=115.17 Aligned_cols=231 Identities=18% Similarity=0.198 Sum_probs=165.2
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC---ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
.+.--.++|+|.+|+ +..+|.+-....|.||..... +..++++.|...|+++.|.|..+ .+++|+.|..-++|.
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~sn-rIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSN-RIVTCSHDRNAYVWT 83 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCC-ceeEccCCCCccccc
Confidence 344445899999999 788999988999999987654 56789999999999999999665 459999999999999
Q ss_pred ccCC-CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce----eEEecCCCCCeEEEEEe-CC-E
Q 009274 322 FSFP-LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL----SCTMSGHKSAVSTLAVC-NG-V 394 (538)
Q Consensus 322 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~~-~~-~ 394 (538)
...+ .-...+...... ....++.++|.++.+++|+....|.+|-.+..+- .+.-+.+.+.|++++|+ ++ +
T Consensus 84 ~~~~~~WkptlvLlRiN---rAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVL 160 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRIN---RAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVL 160 (361)
T ss_pred cCCCCeeccceeEEEec---cceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcce
Confidence 8433 333322222211 2234568899999999999999999998765332 12334578899999999 44 8
Q ss_pred EEEEecCCcEEEEECCC------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc
Q 009274 395 LYSGSRDGTIRLWSLSD------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF 456 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 456 (538)
+++||.|+..+++..-- |+++..+. ...+.+.. +.|+|+|+.|+-.+.|..+.+-|...+
T Consensus 161 laaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~-v~fs~sG~~lawv~Hds~v~~~da~~p 238 (361)
T KOG1523|consen 161 LAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHG-VLFSPSGNRLAWVGHDSTVSFVDAAGP 238 (361)
T ss_pred ecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceee-eEeCCCCCEeeEecCCCceEEeecCCC
Confidence 88999999999986521 11222222 22344444 699999999999999999999984433
Q ss_pred ---eeeeccccceEEEEEe-CCCEEEEEeCC
Q 009274 457 ---MKSMQTHKGSVFAVFL-EGKWLFTGGWD 483 (538)
Q Consensus 457 ---~~~~~~h~~~v~~~~~-~~~~l~sgs~d 483 (538)
........-+..++.| ..+.++.++.|
T Consensus 239 ~~~v~~~~~~~lP~ls~~~ise~~vv~ag~~ 269 (361)
T KOG1523|consen 239 SERVQSVATAQLPLLSVSWISENSVVAAGYD 269 (361)
T ss_pred chhccchhhccCCceeeEeecCCceeecCCC
Confidence 3444434466666666 55556666655
No 210
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=2.8e-13 Score=124.99 Aligned_cols=191 Identities=15% Similarity=0.177 Sum_probs=140.6
Q ss_pred EEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceee
Q 009274 256 TGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK 333 (538)
Q Consensus 256 ~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 333 (538)
.+++|+ |..+++|+.||++|||++.+...+.....|...|.++.|+|++. ++++-+.| ..+||+.+++........
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk-~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGK-FLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCc-EEEEecCC-ceEEEEeccCchhhhcCC
Confidence 667777 89999999999999999988888888889999999999999554 77888888 999999998743332222
Q ss_pred ecccCCceeeeEEEEeecC---C--EEEEeeCCCcEEEEECCCCce-----eEEecCCCCCeEEEEEe--CCEEEEEecC
Q 009274 334 WNEEKDWRYSGIHALTTSG---R--YLYTGSGDRTIKAWSLLDGTL-----SCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (538)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~---~--~l~sg~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~~--~~~l~s~s~d 401 (538)
.. .. .....+.|+.++ . .++.-..-+.|+.||+...+. ......-...|++++.+ +++++.|+.|
T Consensus 226 ~~--k~-~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d 302 (398)
T KOG0771|consen 226 FS--KD-EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD 302 (398)
T ss_pred cc--cc-hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccC
Confidence 11 11 111223455554 2 223333456677776643221 11111233578999999 6699999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
|.|-+++..+.+.++..+..|...++. +.|+|+.+++++.+.|.+..+..
T Consensus 303 GsVai~~~~~lq~~~~vk~aH~~~VT~-ltF~Pdsr~~~svSs~~~~~v~~ 352 (398)
T KOG0771|consen 303 GSVAIYDAKSLQRLQYVKEAHLGFVTG-LTFSPDSRYLASVSSDNEAAVTK 352 (398)
T ss_pred CcEEEEEeceeeeeEeehhhheeeeee-EEEcCCcCcccccccCCceeEEE
Confidence 999999999999998888887776555 79999999999999998888875
No 211
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.52 E-value=1.6e-12 Score=119.21 Aligned_cols=233 Identities=13% Similarity=0.209 Sum_probs=150.3
Q ss_pred CCccceeeeeccCcc-eeEEeecCCeEEEEE------------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEE
Q 009274 218 DGADIDQARAAGGVK-DLVNGLSKGNVKFKD------------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHV 276 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~------------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~i 276 (538)
+..++..+.+..++. .++++..+..+++|. |..|..+|+++.|+ |+.++||+.+|.|.+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 344455666666555 677777777777775 45799999999999 889999999999999
Q ss_pred EeCC--------C--------CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecc----
Q 009274 277 WSLK--------D--------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE---- 336 (538)
Q Consensus 277 wd~~--------~--------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---- 336 (538)
|... + ....+.+.+|...|..++|+|+ +.++++++.|..+++||+..+...........
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d-~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqg 170 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPD-SNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQG 170 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCC-CceeeeeeccceEEEEEeccceeEeeccccccccce
Confidence 9765 2 2345667789999999999985 55779999999999999986543211110000
Q ss_pred -----c----------C-C----------cee-e-----------------------------eEEEEeecCCEEEEeeC
Q 009274 337 -----E----------K-D----------WRY-S-----------------------------GIHALTTSGRYLYTGSG 360 (538)
Q Consensus 337 -----~----------~-~----------~~~-~-----------------------------~~~~~~~~~~~l~sg~~ 360 (538)
. . . ... . .-.+|+|+|..+++...
T Consensus 171 vawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag 250 (434)
T KOG1009|consen 171 VAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAG 250 (434)
T ss_pred eecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccc
Confidence 0 0 0 000 0 00156667766665432
Q ss_pred ----CCc-----EEEEECCC-CceeEEecCCCCCeEEEEEe-------------------CCEEEEEecCCcEEEEECCC
Q 009274 361 ----DRT-----IKAWSLLD-GTLSCTMSGHKSAVSTLAVC-------------------NGVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 361 ----dg~-----i~iwd~~~-~~~~~~~~~h~~~v~~l~~~-------------------~~~l~s~s~dg~i~iwd~~~ 411 (538)
++. .++|+-.. .++...+.+...++..+.++ -++++.-...+.+++||.++
T Consensus 251 ~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~ 330 (434)
T KOG1009|consen 251 LFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQT 330 (434)
T ss_pred eeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEecccc
Confidence 122 23333221 23344444444555555443 02334444456799999988
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
-.++.....-|-..++. ++|++||..++..+.||...+-.
T Consensus 331 ~~P~~~v~nihy~~iTD-iaws~dg~~l~vSS~DGyCS~vt 370 (434)
T KOG1009|consen 331 LEPLAVVDNIHYSAITD-IAWSDDGSVLLVSSTDGFCSLVT 370 (434)
T ss_pred ccceEEEeeeeeeeecc-eeecCCCcEEEEeccCCceEEEE
Confidence 88777766555444444 68999999999999999877654
No 212
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.52 E-value=2.9e-15 Score=143.63 Aligned_cols=111 Identities=18% Similarity=0.246 Sum_probs=80.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.+.+|+- |+||.+... +++++.++|||.|||||.+ +| ..|+..+|+|||||+||||.+|+
T Consensus 136 ~~~~KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv------~e---------~pyd~~sDlWslGcilYE~~~G~P 198 (808)
T KOG0597|consen 136 GGTLKLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELV------EE---------QPYDHTSDLWSLGCILYELYVGQP 198 (808)
T ss_pred CCceeechhhhhhhcccC--ceeeeeccCcccccCHHHH------cC---------CCccchhhHHHHHHHHHHHhcCCC
Confidence 4678887 899999865 5668999999999999999 44 67889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
||.+.....+.... .-.+...+. ..+.. ...++.-.|.++|.+|.+-.++.
T Consensus 199 PF~a~si~~Lv~~I---------~~d~v~~p~-~~S~~-----------f~nfl~gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 199 PFYARSITQLVKSI---------LKDPVKPPS-TASSS-----------FVNFLQGLLIKDPAQRLTWTDLL 249 (808)
T ss_pred CchHHHHHHHHHHH---------hcCCCCCcc-cccHH-----------HHHHHHHHhhcChhhcccHHHHh
Confidence 99987665222000 111111111 12222 44477779999999999866543
No 213
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.51 E-value=8.3e-15 Score=140.86 Aligned_cols=119 Identities=19% Similarity=0.248 Sum_probs=83.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..||+ |++|....... .++...||+.|||||++ ++ ....|+.|+||||||++|+||+||+ ||
T Consensus 182 ~~KI~DFGlsr~~~~~~~--~~~~~~GT~~wMAPEv~------~~-------~~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 182 TLKIADFGLSREKVISKT--SMTSVAGTYRWMAPEVL------RG-------EKSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred EEEECCCccceeeccccc--cccCCCCCccccChhhh------cC-------CCCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 67999 56666554321 25569999999999999 42 0357999999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
.......+.. .. +........+. ....+..++.+|+..+|.+||...++...+..+.
T Consensus 247 ~~~~~~~~~~------------~v--------~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 247 EDLAPVQVAS------------AV--------VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CCCCHHHHHH------------HH--------HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 9875431110 00 00000011111 3334888999999999999999998888776654
No 214
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.51 E-value=5.7e-15 Score=127.15 Aligned_cols=111 Identities=19% Similarity=0.229 Sum_probs=79.8
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
-|++ |+|..+++.++ -..++|||.|||||++ + +..|+..+|||+-||+||-||.|. ||.
T Consensus 152 vKL~~FGvAi~l~~g~~---~~G~~GtP~fmaPEvv------r---------kdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 152 VKLADFGLAIEVNDGEA---WHGFAGTPGYLSPEVL------K---------KDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred eeecccceEEEeCCccc---cccccCCCcccCHHHh------h---------cCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 3677 56778886654 5689999999999999 3 367888999999999999999999 999
Q ss_pred hhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
+++...+.-.. .......+...+....++..++++++|..+|.+|.++.+..
T Consensus 214 ~~~~~rlye~I-----------------~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 214 DEDQHRLYEQI-----------------KAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred CccHHHHHHHH-----------------hccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 97666444111 00011112222333334477899999999999999986543
No 215
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=9.7e-15 Score=143.70 Aligned_cols=106 Identities=19% Similarity=0.243 Sum_probs=74.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.+-+|++ ||.+.---.... ++++||||.|||||++ .+ ..|+.+.|-|||||+|||||+|+
T Consensus 504 eGh~kiADFGlcKe~m~~g~~--TsTfCGTpey~aPEil------~e---------~~Yt~aVDWW~lGVLlyeML~Gq~ 566 (694)
T KOG0694|consen 504 EGHVKIADFGLCKEGMGQGDR--TSTFCGTPEFLAPEVL------TE---------QSYTRAVDWWGLGVLLYEMLVGES 566 (694)
T ss_pred cCcEEecccccccccCCCCCc--cccccCChhhcChhhh------cc---------CcccchhhHHHHHHHHHHHHcCCC
Confidence 4567888 666543322222 6789999999999999 43 78889999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.+++...+. ++... ...++.+. + .+...++.+.|.++|.+|-.+
T Consensus 567 PF~gddEee~FdsI~~d--------~~~yP~~l---s-----------~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 567 PFPGDDEEEVFDSIVND--------EVRYPRFL---S-----------KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCHHHHHHHHhcC--------CCCCCCcc---c-----------HHHHHHHHHHhccCcccccCC
Confidence 99998777444 11100 01111111 0 125568999999999999776
No 216
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.50 E-value=2.2e-14 Score=137.23 Aligned_cols=111 Identities=17% Similarity=0.270 Sum_probs=82.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
.+|++ |+|+++++... ..++++|||.||.||.+ .| ..|+.|||||||||++|||++=+ +|
T Consensus 144 ~VkLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil------~d---------~pYn~KSDiWsLGC~~yEm~~lk~aF 206 (426)
T KOG0589|consen 144 KVKLGDFGLAKILNPEDS--LASTVVGTPYYMCPEIL------SD---------IPYNEKSDIWSLGCCLYEMCTLKPAF 206 (426)
T ss_pred ceeecchhhhhhcCCchh--hhheecCCCcccCHHHh------CC---------CCCCccCcchhhcchHHHHHhccccc
Confidence 34999 99999998862 26689999999999999 55 78889999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
.+.+...+..-. .......++. ...++..++..+|.++|..||++.++.+.
T Consensus 207 ~a~~m~~Li~ki---------------------~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 207 KASNMSELILKI---------------------NRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccchHHHHHHH---------------------hhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 997666222000 0000001111 11237789999999999999999877653
No 217
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.49 E-value=1.4e-14 Score=138.64 Aligned_cols=89 Identities=24% Similarity=0.362 Sum_probs=64.1
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhhc
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (538)
.++|||-|||||++ .| ..|+..||.||||||+||||.|. ||.++++....
T Consensus 347 StVGTPDYiAPEVl------l~---------kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~-------------- 397 (550)
T KOG0605|consen 347 STVGTPDYIAPEVL------LG---------KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETY-------------- 397 (550)
T ss_pred cccCCccccchHHH------hc---------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH--------------
Confidence 48999999999999 44 55889999999999999999999 99999888322
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
.-...|+.-+. .|.. ...-.+..++|+++|+ +|++|...
T Consensus 398 rkI~nwr~~l~-fP~~--~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 398 RKIVNWRETLK-FPEE--VDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHhhhcc-CCCc--CcccHHHHHHHHHHhc-CHHHhcCc
Confidence 22222222110 0000 0111347789999999 99999873
No 218
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.49 E-value=3.1e-11 Score=107.64 Aligned_cols=174 Identities=17% Similarity=0.268 Sum_probs=131.3
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc-CCCCCcceeeecccCCceeeeEEEEee
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS-FPLGHEPLKKWNEEKDWRYSGIHALTT 350 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (538)
+.|.|||=...+++.++. ...+|.++.+.++ . +..-..+.|+||.+. ..+....+......++ .+++.+
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~---r-iVvvl~~~I~VytF~~n~k~l~~~et~~NPkG-----lC~~~~ 144 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD---R-IVVVLENKIYVYTFPDNPKLLHVIETRSNPKG-----LCSLCP 144 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC---e-EEEEecCeEEEEEcCCChhheeeeecccCCCc-----eEeecC
Confidence 479999966667777766 5688999999653 2 233356899999987 3333333333332222 556666
Q ss_pred cCC--EEEE-eeCCCcEEEEECCCCce--eEEecCCCCCeEEEEEe--CCEEEEEecCCc-EEEEECCCCceeEEEecCC
Q 009274 351 SGR--YLYT-GSGDRTIKAWSLLDGTL--SCTMSGHKSAVSTLAVC--NGVLYSGSRDGT-IRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 351 ~~~--~l~s-g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~ 422 (538)
..+ +|+. |-.-|.|.+-|+...+. ...+.+|.+.|.|++.+ +.+++++|..|+ |||||..+|+.+..++...
T Consensus 145 ~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~ 224 (346)
T KOG2111|consen 145 TSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV 224 (346)
T ss_pred CCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC
Confidence 433 4443 44569999999987655 46778999999999999 669999999998 7999999999999998766
Q ss_pred CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 455 (538)
......+++|+|+..+|++++..|++++|.++.
T Consensus 225 d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 225 DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred chheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 555566689999999999999999999998654
No 219
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.49 E-value=6.5e-11 Score=117.59 Aligned_cols=266 Identities=13% Similarity=0.027 Sum_probs=171.9
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc
Q 009274 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (538)
Q Consensus 258 l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (538)
....++.++.++.+|.|..+|..+|+.+...+........... ++..++.++.+|.+..+|..+++.........
T Consensus 61 p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-- 135 (377)
T TIGR03300 61 PAVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA---DGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-- 135 (377)
T ss_pred eEEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE---cCCEEEEEcCCCEEEEEECCCCcEeeeeccCc--
Confidence 3445889999999999999999999999887655432223333 23456778889999999998776543322111
Q ss_pred CCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-----EEEEEeCCEEEEEecCCcEEEEECCCC
Q 009274 338 KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-----STLAVCNGVLYSGSRDGTIRLWSLSDH 412 (538)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~l~s~s~dg~i~iwd~~~~ 412 (538)
. .. ......++.++.++.+|.++.||.++|+.++++....... .+....++.++.+..++.+..+|.++|
T Consensus 136 -~--~~--~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG 210 (377)
T TIGR03300 136 -E--VL--SPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTG 210 (377)
T ss_pred -e--ee--cCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCC
Confidence 0 00 0111235677888889999999999999988875433221 122334678888999999999999999
Q ss_pred ceeEEEecCCCCc---e---EEE-EEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccccceEEEEEeCCCEEEEEeCCCe
Q 009274 413 SLLTVLEEDSSGA---V---SSV-LSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGKWLFTGGWDKT 485 (538)
Q Consensus 413 ~~~~~~~~~~~~~---~---~~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~ 485 (538)
+.+.......... . ... ....-.+..+++++.+|.++.||..+....+............++..++.++.||.
T Consensus 211 ~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~~~~~vyv~~~~G~ 290 (377)
T TIGR03300 211 QPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAVDDNRLYVTDADGV 290 (377)
T ss_pred CEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCCccCceEeCCEEEEECCCCe
Confidence 8776543211100 0 000 00001356788888999999999654322222111122233446788888899999
Q ss_pred EEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 486 VSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 486 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++.+|..+++.......... .........++.+++++.+|.|+++|..
T Consensus 291 l~~~d~~tG~~~W~~~~~~~----~~~ssp~i~g~~l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 291 VVALDRRSGSELWKNDELKY----RQLTAPAVVGGYLVVGDFEGYLHWLSRE 338 (377)
T ss_pred EEEEECCCCcEEEccccccC----CccccCEEECCEEEEEeCCCEEEEEECC
Confidence 99999999887655422111 1112222347789999999999999864
No 220
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.49 E-value=2.3e-10 Score=111.47 Aligned_cols=237 Identities=13% Similarity=0.153 Sum_probs=147.7
Q ss_pred CCCcEEEEEEc--CCEEEEEe-CCCcEEEEeCC-CCce--EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 251 HRDCVTGLAVG--GGFLFSSS-FDKSIHVWSLK-DFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s-~dg~i~iwd~~-~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
+.+....++++ +++|++++ .++.|.+|+++ +++. ..... ..+....++++|+++.++++...++.|.+|++++
T Consensus 33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 34556778887 77776654 58899999986 3432 22222 2345678999998777766666799999999974
Q ss_pred CCCC-cceeeecccCCceeeeEEEEeecCCEEEEe-eCCCcEEEEECCCCceeE-------EecCCCCCeEEEEEe--CC
Q 009274 325 PLGH-EPLKKWNEEKDWRYSGIHALTTSGRYLYTG-SGDRTIKAWSLLDGTLSC-------TMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~-------~~~~h~~~v~~l~~~--~~ 393 (538)
.... ........... .....++|++++++++ ..++.|.+||+.+...+. ... .......++|+ ++
T Consensus 112 ~g~~~~~~~~~~~~~~---~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~ 187 (330)
T PRK11028 112 DGIPVAPIQIIEGLEG---CHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQ 187 (330)
T ss_pred CCCCCCceeeccCCCc---ccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCC
Confidence 3221 22221111111 1234688999877554 456999999997633221 111 12345678888 44
Q ss_pred EEEEEec-CCcEEEEECCC--Cc--eeEEEecCCC----CceEEEEEEcCCCCEEEEEeC-CCcEEEEeCCc--ceeeec
Q 009274 394 VLYSGSR-DGTIRLWSLSD--HS--LLTVLEEDSS----GAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK--FMKSMQ 461 (538)
Q Consensus 394 ~l~s~s~-dg~i~iwd~~~--~~--~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~--~~~~~~ 461 (538)
+++++.. +++|.+||+.. ++ .+..+..... ......+.++|++++++++.. ++.|.+|+..+ ....+.
T Consensus 188 ~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~ 267 (330)
T PRK11028 188 YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE 267 (330)
T ss_pred EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe
Confidence 7777765 89999999973 33 2333322110 111223678999999998854 78999998532 222222
Q ss_pred cccc-----eEEEEEeCCCEEEEEeC-CCeEEEEecC
Q 009274 462 THKG-----SVFAVFLEGKWLFTGGW-DKTVSVQELA 492 (538)
Q Consensus 462 ~h~~-----~v~~~~~~~~~l~sgs~-dg~v~iwd~~ 492 (538)
.+.. .-..++++|++|++++. +++|.+|+++
T Consensus 268 ~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 268 GHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 2211 22345569999998776 8999999875
No 221
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.48 E-value=2.9e-13 Score=117.15 Aligned_cols=157 Identities=18% Similarity=0.255 Sum_probs=119.0
Q ss_pred CCCcEEEEEEc-----CCEEEEEeCCCcEEEEeCCCCce----------EEEEecCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 251 HRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDFSH----------VHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 251 h~~~V~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~----------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
-.+.+.|..+. .-++++|-.+|.|.+||+.++.. ......|..+|.++.|.+.-..= ++|+.+.
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rG-isgga~d 227 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRG-ISGGADD 227 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCC-cCCCccc
Confidence 45677777754 23467788899999999998733 33345699999999997533222 7788888
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C-C
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-G 393 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-~ 393 (538)
.+..|+++.....-.+.....-+. .-..-..+-||++.++++++|+.|++|..++.+++..++-|...|++++|+ + +
T Consensus 228 kl~~~Sl~~s~gslq~~~e~~lkn-pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~ 306 (323)
T KOG0322|consen 228 KLVMYSLNHSTGSLQIRKEITLKN-PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCE 306 (323)
T ss_pred cceeeeeccccCcccccceEEecC-CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCc
Confidence 999999875432222222111111 111234788999999999999999999999999999999999999999999 3 6
Q ss_pred EEEEEecCCcEEEEEC
Q 009274 394 VLYSGSRDGTIRLWSL 409 (538)
Q Consensus 394 ~l~s~s~dg~i~iwd~ 409 (538)
.+++++.|+.|.+|++
T Consensus 307 lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 307 LMAAASKDARISLWKL 322 (323)
T ss_pred hhhhccCCceEEeeec
Confidence 9999999999999986
No 222
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.48 E-value=4.2e-12 Score=120.28 Aligned_cols=257 Identities=17% Similarity=0.189 Sum_probs=164.9
Q ss_pred cCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEe-------cCCCCEEEEEcCCCcEEEEE
Q 009274 250 GHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYV-------DEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 250 ~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-------~~~~~~l~s~~~dg~i~vwd 321 (538)
.|...|.|+.|. ...++.++.|..+.+|.--+......++-....+....+. ..+...++.++.||.+.+.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 466777788888 6666667777777777644333333332222222221111 12344678899999999886
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEE
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSG 398 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~ 398 (538)
-.. +....+. .|.. ...+-.++++|.-|++++.||.|++|. ++|-...++.....+|+|++|. ++.+++.
T Consensus 92 k~~-rVE~sv~---AH~~--A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~ 164 (737)
T KOG1524|consen 92 KSA-RVERSIS---AHAA--AISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQ 164 (737)
T ss_pred ccc-hhhhhhh---hhhh--hhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEec
Confidence 431 1111111 1111 112346889999999999999999999 6777666666677899999998 2345444
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe-CCcceeeeccccceEEEEEeCC-CE
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR-NDKFMKSMQTHKGSVFAVFLEG-KW 476 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~~~~~~h~~~v~~~~~~~-~~ 476 (538)
+ +.+.+=-+.....+-..+.| .+.+.+ +.|++..+.+++|++|-..++|| .+..+..-..|.-+|++++|+. ..
T Consensus 165 g--~h~~IKpL~~n~k~i~WkAH-DGiiL~-~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd~~ 240 (737)
T KOG1524|consen 165 G--GHISIKPLAANSKIIRWRAH-DGLVLS-LSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPEKD 240 (737)
T ss_pred C--CeEEEeecccccceeEEecc-CcEEEE-eecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccccc
Confidence 3 45666666655556666665 454444 69999999999999999999999 6677888888999999999943 44
Q ss_pred EEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEE
Q 009274 477 LFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKV 533 (538)
Q Consensus 477 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~v 533 (538)
++.+|. +++|+=.. ..+++....+++||. +++|+..|.+.+
T Consensus 241 ~~v~S~-nt~R~~~p---------------~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 241 YLLWSY-NTARFSSP---------------RVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeeeee-eeeeecCC---------------CccceEEEEEcCCCceeeccccCceEEE
Confidence 555543 34441111 133344444445665 556777776643
No 223
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.47 E-value=1.6e-11 Score=108.26 Aligned_cols=265 Identities=14% Similarity=0.154 Sum_probs=162.9
Q ss_pred CCCcEEEEeCCCCceEE--EE-ecCCcCeEEEEEe--cCCCC-EEEEEcCCCcEEEEEccCCCCCcceeeecccCCcee-
Q 009274 270 FDKSIHVWSLKDFSHVH--TF-KGHDHKVMAVVYV--DEDQP-LCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY- 342 (538)
Q Consensus 270 ~dg~i~iwd~~~~~~~~--~~-~~h~~~v~~l~~~--~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~- 342 (538)
..|.+.+|++.+.+... ++ ...+..+..+.|. +.++. .++-+..+|.|.++..........+...........
T Consensus 44 R~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~ 123 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVE 123 (339)
T ss_pred eccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhhee
Confidence 34678888887654432 22 2234567777776 33333 567778889999998764433333333222221111
Q ss_pred eeEEEEeecCCEEEEeeCCCcEEEEECCCCce--eEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECC-CCceeE
Q 009274 343 SGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL--SCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS-DHSLLT 416 (538)
Q Consensus 343 ~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~-~~~~~~ 416 (538)
.....++..+..++++-.+|.+.+-+...... ++.++.|.-++....|+ ++++++|+.|+.+..||+| .++.+.
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 23446677788899999999999666555444 44789999999999998 6799999999999999999 344444
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeecc--ccceEEEEEe----CCCEEEEEeCCCeEEEEe
Q 009274 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQT--HKGSVFAVFL----EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--h~~~v~~~~~----~~~~l~sgs~dg~v~iwd 490 (538)
.-..-|...+.++.+-.|.+.++++|+.|..|++||++..-+.+.. -.+.|+.+.. .+..|+++-.+ -.+|-+
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~-G~ki~~ 282 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHN-GAKILD 282 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhc-CceEEE
Confidence 4222234455666666778899999999999999998754443322 3367777764 33334444443 466766
Q ss_pred cCCCeeEeeeecCCcccCCCceEEEEEe--CCEEEEEE-CCCeEE-EEE
Q 009274 491 LAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGC-ADRTVK-VYY 535 (538)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~-~dg~v~-vw~ 535 (538)
.+.+.............+.+.+....|. ++.+++++ .|+.++ +|-
T Consensus 283 ~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl 331 (339)
T KOG0280|consen 283 SSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWL 331 (339)
T ss_pred ecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeee
Confidence 6654432111111111122222222332 34477754 577755 774
No 224
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.47 E-value=1.3e-11 Score=114.06 Aligned_cols=188 Identities=19% Similarity=0.206 Sum_probs=135.3
Q ss_pred eEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecC
Q 009274 344 GIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 344 ~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 421 (538)
.++++..+|..+++|+.||++|+|+..+...+.....|...|.++.|+ +.+|++-+.| ..+||+.+++..+......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 577999999999999999999999988888888888899999999999 4489999999 9999999999777766643
Q ss_pred CCCceEEEEEEcCCC---C--EEEEEeCCCcEEEEeCC-----cce--eeeccccceEEEEE--eCCCEEEEEeCCCeEE
Q 009274 422 SSGAVSSVLSLTAVQ---H--TLVVSHESGSIKVWRND-----KFM--KSMQTHKGSVFAVF--LEGKWLFTGGWDKTVS 487 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~---~--~l~~~~~dg~i~iwd~~-----~~~--~~~~~h~~~v~~~~--~~~~~l~sgs~dg~v~ 487 (538)
........+.|+.++ . .++....-+.|+.||+. +.. .+.......|.+++ .+|++++.|+.||.|-
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 344444445777666 2 33333445667766632 111 11111223455554 5999999999999999
Q ss_pred EEecCCCeeEeeeecCCcccCCCceEEE-EEeCCE-EEEEECCCeEEEEEc
Q 009274 488 VQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 488 iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-l~sg~~dg~v~vw~~ 536 (538)
|++..+-+.....+.. |...++.+ +.|+.+ +++.+.|....|..+
T Consensus 307 i~~~~~lq~~~~vk~a----H~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l 353 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEA----HLGFVTGLTFSPDSRYLASVSSDNEAAVTKL 353 (398)
T ss_pred EEEeceeeeeEeehhh----heeeeeeEEEcCCcCcccccccCCceeEEEE
Confidence 9999988766555443 33355555 445554 677777777777654
No 225
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.47 E-value=1.5e-12 Score=122.08 Aligned_cols=283 Identities=13% Similarity=0.091 Sum_probs=205.0
Q ss_pred cCCCCCCCccceeeeeccCcceeEEeecCCeEEEEEe----------ecCCCcEEEEEEc----CCEEEEEeCCCcEEEE
Q 009274 212 LGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL----------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVW 277 (538)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l----------~~h~~~V~~l~~~----~~~l~s~s~dg~i~iw 277 (538)
....+...+.++.+.+...+..+++++.+-.+.+|+. .||...|..-.|- ...+++++.||.|++=
T Consensus 135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence 3344445566788888888888999998888888873 4788888776664 6789999999999987
Q ss_pred eCC-CCce--EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC-ceeeeEEEEeecC-
Q 009274 278 SLK-DFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD-WRYSGIHALTTSG- 352 (538)
Q Consensus 278 d~~-~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 352 (538)
.+. ++.+ ...+..|.++|.-++.-|....-|.+++.|+.+.-+|++.......+........ .......++.|..
T Consensus 215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt 294 (559)
T KOG1334|consen 215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT 294 (559)
T ss_pred eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence 764 3333 3445679999999999999999999999999999999987665544443222222 0122233455543
Q ss_pred CEEEEeeCCCcEEEEECCCCce------eEEec------CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCC--C----
Q 009274 353 RYLYTGSGDRTIKAWSLLDGTL------SCTMS------GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD--H---- 412 (538)
Q Consensus 353 ~~l~sg~~dg~i~iwd~~~~~~------~~~~~------~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~--~---- 412 (538)
..+++|+.|..+++||.+.-.. +..+. ...-.|+|++|+ +.-++++..|-.|+++.-.. |
T Consensus 295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~ 374 (559)
T KOG1334|consen 295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPD 374 (559)
T ss_pred cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCC
Confidence 3899999999999999875321 22222 123468999999 45777777788899995432 2
Q ss_pred ------ceeEE-EecCCCC-ceEEEEEEcCCCCEEEEEeCCCcEEEEe--CCcceeeeccccceEEEEEe--CCCEEEEE
Q 009274 413 ------SLLTV-LEEDSSG-AVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTG 480 (538)
Q Consensus 413 ------~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 480 (538)
..+.. +++|... .+..+-.|-|...++++|+.-|.|.||+ ..+.++.+.+...-|+|+.+ .-..|++.
T Consensus 375 ~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsS 454 (559)
T KOG1334|consen 375 PSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASS 454 (559)
T ss_pred CCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhcc
Confidence 11222 4454332 2444557789999999999999999999 44677778886668999976 66789999
Q ss_pred eCCCeEEEEecCCC
Q 009274 481 GWDKTVSVQELAGD 494 (538)
Q Consensus 481 s~dg~v~iwd~~~~ 494 (538)
|-|..|+||-..+.
T Consensus 455 Gid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 455 GIDHDVKIWTPLTA 468 (559)
T ss_pred CCccceeeecCCcc
Confidence 99999999987443
No 226
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.46 E-value=1.5e-12 Score=123.23 Aligned_cols=196 Identities=16% Similarity=0.243 Sum_probs=142.3
Q ss_pred ceeEEeecCCeEEEEE--------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEe
Q 009274 232 KDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYV 301 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~--------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 301 (538)
..++..+++|+..+-+ ...|.++|.|-.|+ |.-|+|++.||.|++|. .+|-...++.....+|.|++|-
T Consensus 76 d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~ 154 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWA 154 (737)
T ss_pred ceEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEEC
Confidence 3455566666655543 56899999999999 89999999999999998 4565555666678899999999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 009274 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (538)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h 381 (538)
|+.+..+++.+ +.+.+=.+. ....+-.|..|.+. .-++.+++..+.+++|+.|-..++||. .|..+..-..|
T Consensus 155 p~S~~vl~c~g--~h~~IKpL~---~n~k~i~WkAHDGi--iL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ 226 (737)
T KOG1524|consen 155 PNSNSIVFCQG--GHISIKPLA---ANSKIIRWRAHDGL--VLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAE 226 (737)
T ss_pred CCCCceEEecC--CeEEEeecc---cccceeEEeccCcE--EEEeecCccccceeecCCceeEEeecc-cCcccccCChh
Confidence 99988887766 444443332 22233444555442 223456667789999999999999995 67778777889
Q ss_pred CCCeEEEEEeCC-EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEE
Q 009274 382 KSAVSTLAVCNG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (538)
Q Consensus 382 ~~~v~~l~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 450 (538)
.-+|++++|.++ .++.+| -++++ +.....+.+.. ++|++||..+++|+..|.+.+
T Consensus 227 ey~ITSva~npd~~~~v~S-~nt~R------------~~~p~~GSifn-lsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 227 EYAITSVAFNPEKDYLLWS-YNTAR------------FSSPRVGSIFN-LSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ccceeeeeeccccceeeee-eeeee------------ecCCCccceEE-EEEcCCCceeeccccCceEEE
Confidence 999999999954 444444 34455 33333344444 799999999999999988765
No 227
>PHA02988 hypothetical protein; Provisional
Probab=99.45 E-value=1.9e-14 Score=136.85 Aligned_cols=117 Identities=13% Similarity=0.151 Sum_probs=79.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..+|+. |+++.+... ....+||+.|||||++.+. ...++.++|||||||++|||++|+
T Consensus 159 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~-------------~~~~~~k~Di~SlGvil~el~~g~~ 220 (283)
T PHA02988 159 NYKLKIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDI-------------FSEYTIKDDIYSLGVVLWEIFTGKI 220 (283)
T ss_pred CCcEEEcccchHhhhccc-----cccccCcccccCHHHhhhc-------------cccccchhhhhHHHHHHHHHHHCCC
Confidence 4568888 556655433 2246899999999998221 145789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||...+...+........ .. ...+ .....+.+++.+||+.+|..||+..++...+.++
T Consensus 221 Pf~~~~~~~~~~~i~~~~------~~--------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 221 PFENLTTKEIYDLIINKN------NS--------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCCCCHHHHHHHHHhcC------CC--------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 998764442210000000 00 0000 1122478899999999999999999998877765
No 228
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=2.1e-14 Score=134.16 Aligned_cols=112 Identities=21% Similarity=0.319 Sum_probs=72.6
Q ss_pred ccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeecccc
Q 009274 25 DKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTK 103 (538)
Q Consensus 25 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~ 103 (538)
+..+..| .+++|||.|||||++++.. -.|+.|+||||||++..||.+|. ||...-+..++-..
T Consensus 181 ~R~~~rf-~tfvgtp~wmAPEvl~q~~-------------~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t-- 244 (516)
T KOG0582|consen 181 DRQVTRF-NTFVGTPCWMAPEVLMQQL-------------HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT-- 244 (516)
T ss_pred ceeeEee-ccccCcccccChHHhhhcc-------------cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--
Confidence 3334433 7899999999999984444 33889999999999999999999 99886444222111
Q ss_pred ccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 104 ASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
++..++.+. .......+...-..+..+++..||.++|.+||++.++.++
T Consensus 245 -------Lqn~pp~~~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 245 -------LQNDPPTLL--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -------hcCCCCCcc--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 111111100 0001111111111247789999999999999999887664
No 229
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.45 E-value=2.3e-13 Score=126.68 Aligned_cols=223 Identities=15% Similarity=0.250 Sum_probs=165.0
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce
Q 009274 295 VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL 374 (538)
Q Consensus 295 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 374 (538)
-+.+.|+. ++..++.|+.-|.+-.+|+.+......+.......+ ..|-.+.++++++ ....+++|| +.|..
T Consensus 132 PY~~~ytr-nGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~D------v~~LHneq~~AVA-QK~y~yvYD-~~GtE 202 (545)
T KOG1272|consen 132 PYHLDYTR-NGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRD------VTFLHNEQFFAVA-QKKYVYVYD-NNGTE 202 (545)
T ss_pred CeeeeecC-CccEEEecCCccceeeeecccceeeeeeehhhhhhh------hhhhcchHHHHhh-hhceEEEec-CCCcE
Confidence 35677766 455678888999999999987654333322211111 1233345566655 568899999 57888
Q ss_pred eEEecCCCCCeEEEEEeCC--EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 375 SCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 375 ~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
++.++.| ..|..+.|-+. +|++++..|.++.-|+.+|+.+..+.... + ...++.-+|-+..+-+|...|+|.+|.
T Consensus 203 lHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~-G-~~~vm~qNP~NaVih~GhsnGtVSlWS 279 (545)
T KOG1272|consen 203 LHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGA-G-RTDVMKQNPYNAVIHLGHSNGTVSLWS 279 (545)
T ss_pred Eeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccC-C-ccchhhcCCccceEEEcCCCceEEecC
Confidence 8888754 56888999844 77888999999999999999988887542 2 344578889899999999999999998
Q ss_pred --CCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECC
Q 009274 453 --NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCAD 528 (538)
Q Consensus 453 --~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 528 (538)
..+++..+..|.++|.++++ +|++++|.|.|..++|||++........... .....+.+++.-+++++..
T Consensus 280 P~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp------~~a~~ls~SqkglLA~~~G 353 (545)
T KOG1272|consen 280 PNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTP------HPASNLSLSQKGLLALSYG 353 (545)
T ss_pred CCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecC------CCccccccccccceeeecC
Confidence 55688889999999999987 8999999999999999999987633322221 1234445556667777777
Q ss_pred CeEEEEE
Q 009274 529 RTVKVYY 535 (538)
Q Consensus 529 g~v~vw~ 535 (538)
..|.||.
T Consensus 354 ~~v~iw~ 360 (545)
T KOG1272|consen 354 DHVQIWK 360 (545)
T ss_pred Ceeeeeh
Confidence 7899995
No 230
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3.1e-14 Score=137.24 Aligned_cols=113 Identities=17% Similarity=0.250 Sum_probs=78.9
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
-|+. |+..++..... -.++++|||.|||||++ .+..|+++.||||||+++.||+-|+ ||-
T Consensus 408 vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVv---------------trk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 408 VKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVV---------------TRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred EEEeeeeeeeccccccC--ccccccCCCCccchhhh---------------hhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 4777 77777776542 27789999999999999 3467889999999999999999999 887
Q ss_pred hhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
.+.+-..+.+.-.+. .+.....+.++. .+.+.+.+||..++++|+++.++.++
T Consensus 471 nE~PlrAlyLIa~ng-------~P~lk~~~klS~-----------~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 471 NENPLRALYLIATNG-------TPKLKNPEKLSP-----------ELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCChHHHHHHHhhcC-------CCCcCCccccCH-----------HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 544431111110000 011111122222 37789999999999999999887763
No 231
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.44 E-value=4.1e-12 Score=120.53 Aligned_cols=192 Identities=15% Similarity=0.210 Sum_probs=134.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEe----cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFK----GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (538)
+--++.|-.-|.|.+.|....+..+.+. ..+..|+++.|.|.+..+++.+-.+|.++++|..-......
T Consensus 185 g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~------- 257 (636)
T KOG2394|consen 185 GLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATA------- 257 (636)
T ss_pred CcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCC-------
Confidence 4457777778888888865432222111 23478999999999999999999999999998732111000
Q ss_pred CCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCcee
Q 009274 338 KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL 415 (538)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~ 415 (538)
......+++..+......+ ..+..++..+.--.+.|+..+|+ +.+|++.+.||.+||||..+.+++
T Consensus 258 ------p~~~~~k~~~~f~i~t~ks------k~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLl 325 (636)
T KOG2394|consen 258 ------PSYQALKDGDQFAILTSKS------KKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELL 325 (636)
T ss_pred ------CcccccCCCCeeEEeeeec------cccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHH
Confidence 1112233454444432211 11224555554456689999999 559999999999999999988876
Q ss_pred EEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEeCC
Q 009274 416 TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFLEG 474 (538)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~~~ 474 (538)
..++.-- +... +++|+|||++|++|++|..|.||.. ++.+..=++|.++|..++||.
T Consensus 326 g~mkSYF-GGLL-CvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 326 GVMKSYF-GGLL-CVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred HHHHhhc-cceE-EEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 6655432 2233 3699999999999999999999984 456777789999999999986
No 232
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.40 E-value=4.3e-11 Score=109.55 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=165.8
Q ss_pred CCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCceEEE------EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 252 RDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSHVHT------FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 252 ~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~------~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
...|++++|. .+.+...+.|..+..+.++....... ......+|..++.. ...+++|-.+|.+.+|.
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~---dg~Litc~~sG~l~~~~ 131 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA---DGTLITCVSSGNLQVRH 131 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc---CCEEEEEecCCcEEEEe
Confidence 3556777776 44556665777777777766544433 33456777777763 33678899999999999
Q ss_pred ccCCCCCc-ceeeecccCCceeeeEEEEeecCCEEEEeeCC--CcEEEEECCCCceeEEecCCC---------CCeEEEE
Q 009274 322 FSFPLGHE-PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD--RTIKAWSLLDGTLSCTMSGHK---------SAVSTLA 389 (538)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--g~i~iwd~~~~~~~~~~~~h~---------~~v~~l~ 389 (538)
...+.... .+..+..+. ....+.....+...+++|+.. ..+.+||+.+.+.+++-+.-. -.++++.
T Consensus 132 ~k~~d~hss~l~~la~g~--g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 132 DKSGDLHSSKLIKLATGP--GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred ccCCccccccceeeecCC--ceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 88654221 111111111 111111112234577789998 899999999887666544322 2356677
Q ss_pred Ee-C---CEEEEEecCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc---eeeec
Q 009274 390 VC-N---GVLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF---MKSMQ 461 (538)
Q Consensus 390 ~~-~---~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~ 461 (538)
|- + ..+++++.-+.+++||.+.++ ++..+.... ...+.+...|+++++++|..-|.+..||.+.. ...++
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E--~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~k 287 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE--NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLK 287 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccCcceeEecccc--CcceeeeecCCCcEEEEecccchhheecccCceeeccccC
Confidence 76 2 389999999999999999764 455665432 23444788999999999999999999997652 33477
Q ss_pred cccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeee
Q 009274 462 THKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 462 ~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 500 (538)
+-.+.+.++.. ...+++++|-|..|||+|+.+.++....
T Consensus 288 g~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kv 328 (412)
T KOG3881|consen 288 GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKV 328 (412)
T ss_pred CccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhh
Confidence 88899999876 5579999999999999999997654433
No 233
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.40 E-value=1.9e-13 Score=130.97 Aligned_cols=91 Identities=27% Similarity=0.429 Sum_probs=67.8
Q ss_pred hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhh
Q 009274 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (538)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (538)
++|+||..|.+||+| .....+++||||+||||||+||.|. ||.+.+...++
T Consensus 245 ~SFVGTAeYVSPElL---------------~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF------------- 296 (604)
T KOG0592|consen 245 SSFVGTAEYVSPELL---------------NDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF------------- 296 (604)
T ss_pred cceeeeecccCHHHh---------------cCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH-------------
Confidence 569999999999999 3367889999999999999999999 99997666444
Q ss_pred cchhhHHHHHHHHHHHhhhcCccc-hHHHHHhhhhccCCCCCcchhhHHH
Q 009274 112 LGMYMAWMEKVTYLLENKFGSEFV-SLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+++..+.. ..+..|+ ...+++.+.|-.+|..|.++.+|.+
T Consensus 297 --------qkI~~l~y-~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 297 --------QKIQALDY-EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred --------HHHHHhcc-cCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 00111100 1111222 2667999999999999999977665
No 234
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=1.2e-13 Score=135.60 Aligned_cols=115 Identities=17% Similarity=0.323 Sum_probs=79.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.+|-||. |-++|+-.. .| ++-+|.||..|||||++ + .....|+.++|||||||++.||.||+
T Consensus 712 SGvlKISDFGTsKRLAgi-nP-~TETFTGTLQYMAPEvI-----D--------qG~RGYG~aADIWS~GCT~vEMATGrP 776 (1226)
T KOG4279|consen 712 SGVLKISDFGTSKRLAGI-NP-CTETFTGTLQYMAPEVI-----D--------QGPRGYGKAADIWSFGCTMVEMATGRP 776 (1226)
T ss_pred cceEEecccccchhhccC-Cc-cccccccchhhhChHhh-----c--------cCCcCCCchhhhhhccceeEeeccCCC
Confidence 4788998 556776644 33 24479999999999999 1 12456889999999999999999999
Q ss_pred ccchh-hhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKE-LID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||... +++ .+. + .. +....+...+.++.. ....+++|+..+|..||++.++..
T Consensus 777 PF~ElgspqAAMF--k--VG-----myKvHP~iPeelsae-----------ak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 777 PFVELGSPQAAMF--K--VG-----MYKVHPPIPEELSAE-----------AKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CeeecCChhHhhh--h--hc-----ceecCCCCcHHHHHH-----------HHHHHHHHcCCCcccCccHHHhcc
Confidence 99864 333 111 0 00 111222222333333 455999999999999999877554
No 235
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.39 E-value=1.1e-11 Score=117.68 Aligned_cols=162 Identities=17% Similarity=0.209 Sum_probs=123.9
Q ss_pred eeeeccCcceeEEeecCCeEEEEEee-------------cCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC------
Q 009274 224 QARAAGGVKDLVNGLSKGNVKFKDLQ-------------GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD------ 281 (538)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~l~-------------~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~------ 281 (538)
.....+.+-.++.+...|.+.+.+.. -.+..|+|+.|- ...++.+-.+|.+.+||.+-
T Consensus 178 ~~~a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~ 257 (636)
T KOG2394|consen 178 SFTATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATA 257 (636)
T ss_pred ccccCCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCC
Confidence 34445667778888888877665421 134789999997 67788888899999997531
Q ss_pred --------C--------------ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC
Q 009274 282 --------F--------------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD 339 (538)
Q Consensus 282 --------~--------------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 339 (538)
+ .++..+..-.+.|...+|+| ++.+|++.+.||.++|+|+.+......++.+...
T Consensus 258 p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGG-- 334 (636)
T KOG2394|consen 258 PSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGG-- 334 (636)
T ss_pred CcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC-CCceEEEEecCceEEEeeccHHHHHHHHHhhccc--
Confidence 1 11222223345788999999 6678899999999999999876555555444332
Q ss_pred ceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 009274 340 WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (538)
.-+++|+|||++|++|++|-.|.||.+..++.+..-.+|++.|+.|+|+
T Consensus 335 ---LLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 335 ---LLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred ---eEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 2377999999999999999999999999999999999999999999986
No 236
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=9.2e-11 Score=118.04 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=137.8
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCC---CcEEEEeCCCCce--EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
..+..|...+.+.+|+ |+.|+.++.+ ..|++||+.+++. +..+.+| ...++|+|++..++++.+.+|.+.
T Consensus 197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~ 273 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLN 273 (429)
T ss_pred eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEE
Confidence 4466788889999999 8888887654 3699999988754 3333333 446899998877777677888777
Q ss_pred EEEc--cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee-CCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--C
Q 009274 319 VWSF--SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 319 vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~ 392 (538)
||.+ .++. ......+.. ......++|||+.++.++ .+|...+|+++.. .....+ .+.. .+..|+ +
T Consensus 274 Iy~~d~~~~~----~~~lt~~~~--~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG 344 (429)
T PRK01742 274 IYVMGANGGT----PSQLTSGAG--NNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADG 344 (429)
T ss_pred EEEEECCCCC----eEeeccCCC--CcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCC
Confidence 6654 3332 112222111 122458899999766554 5788888876532 222223 3433 456777 4
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe----CCcceeeeccccceEE
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR----NDKFMKSMQTHKGSVF 468 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd----~~~~~~~~~~h~~~v~ 468 (538)
+.++..+.++ +.+||+.+++........ .. ....|+|+|++++.++.++...+|+ .++..+.+..|.+.+.
T Consensus 345 ~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~-~~---~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~ 419 (429)
T PRK01742 345 KTLVMINGDN-VVKQDLTSGSTEVLSSTF-LD---ESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVK 419 (429)
T ss_pred CEEEEEcCCC-EEEEECCCCCeEEecCCC-CC---CCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCC
Confidence 5777777655 566999988754332221 11 1257999999999999999888776 2456777777877666
Q ss_pred EEEe
Q 009274 469 AVFL 472 (538)
Q Consensus 469 ~~~~ 472 (538)
..+|
T Consensus 420 ~p~w 423 (429)
T PRK01742 420 FPAW 423 (429)
T ss_pred Cccc
Confidence 6655
No 237
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=1.4e-13 Score=133.66 Aligned_cols=110 Identities=23% Similarity=0.286 Sum_probs=76.8
Q ss_pred eeeeec--ccccccc-ccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccc-cccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRIC-DKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEF-SVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~-~~~~~sDi~slG~~l~~lltg~ 87 (538)
.-.|+. |+|.... .++ .+++.+|||+|+|||++ .| +. --+.++||||+||+||.|++|+
T Consensus 158 ~~~Kl~DFG~s~~~~~~~~---~l~t~cGsp~Y~aPEvl------~~--------~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 158 GNLKLSDFGLSAISPGEDG---LLKTFCGSPAYAAPEVL------SG--------KGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred CCEEEeccccccccCCCCC---cccCCCCCcccCCHHHh------CC--------CCCcCCchhhhhhhHHHHHHHHhCC
Confidence 446777 8888874 322 38899999999999999 43 22 2257899999999999999999
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCc--cchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSE--FVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||+..+...+.. ........+ +.. -.++..++.++|..+|.+|++..++..
T Consensus 221 ~PF~d~~~~~l~~-----------------ki~~~~~~~-----p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 221 LPFDDSNVPNLYR-----------------KIRKGEFKI-----PSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCCCCccHHHHHH-----------------HHhcCCccC-----CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 999865442220 000000000 011 224678999999999999999988773
No 238
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.39 E-value=1.1e-10 Score=104.14 Aligned_cols=205 Identities=17% Similarity=0.190 Sum_probs=153.4
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
.+..-..+|+|.+|+++ ...++.+.....|.||.......-.....+..+.. .. ..+++++..+.|++|+.|..-++
T Consensus 5 ~~~~~~~pitchAwn~d-rt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~-~v-tgvdWap~snrIvtcs~drnayV 81 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSD-RTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDK-IV-TGVDWAPKSNRIVTCSHDRNAYV 81 (361)
T ss_pred EeeeccCceeeeeecCC-CceEEeccCCceEEEEEecCCCCceeceehhhhCc-ce-eEEeecCCCCceeEccCCCCccc
Confidence 34444579999999885 45668888889999999876654455555555443 22 34688899999999999999999
Q ss_pred EECCC-C--ceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCcee---EEEecCCCCceEEEEEEcCCCCE
Q 009274 367 WSLLD-G--TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL---TVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 367 wd~~~-~--~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
|.... + ++...+..++..++++.|+ ++.+++||..+.|.+|-+....-- +.++......+.+ +.|+|++-+
T Consensus 82 w~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~s-ldWhpnnVL 160 (361)
T KOG1523|consen 82 WTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTS-LDWHPNNVL 160 (361)
T ss_pred cccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceee-eeccCCcce
Confidence 99843 3 3455566789999999999 679999999999999988654422 1222233333444 799999999
Q ss_pred EEEEeCCCcEEEEe-----CC---------------cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 439 LVVSHESGSIKVWR-----ND---------------KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 439 l~~~~~dg~i~iwd-----~~---------------~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+++|+.|+..++|. .+ .+..++....+.+..+.| +|..|+-.+.|..+.+=|.....
T Consensus 161 laaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 161 LAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred ecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 99999999999985 11 122233345678888877 79999999999999999988765
No 239
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.39 E-value=4.1e-11 Score=109.72 Aligned_cols=206 Identities=11% Similarity=0.136 Sum_probs=153.3
Q ss_pred eecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCc----eEEEEecCCcCeEEEEEecCCCCEEEEEcCC--CcEEEEE
Q 009274 248 LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFS----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWS 321 (538)
Q Consensus 248 l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d--g~i~vwd 321 (538)
.....++|..++..+..|++|-.+|.+.+|..+.+. .+..+..+ ..+..+.-++....++++|+.. ..+.+||
T Consensus 101 ~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwd 179 (412)
T KOG3881|consen 101 VSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWD 179 (412)
T ss_pred cccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeee
Confidence 445667888888888999999999999999987432 33334433 5677788888888899999999 8999999
Q ss_pred ccCCCCCcceeeecccCC----ceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--C
Q 009274 322 FSFPLGHEPLKKWNEEKD----WRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~ 392 (538)
++..+....-+......- .....-..|-+. ...|++++.-+.+++||.+.+ +++..+.-...+++++... +
T Consensus 180 le~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~g 259 (412)
T KOG3881|consen 180 LEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSG 259 (412)
T ss_pred cccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCC
Confidence 987633222211111100 011111233333 558999999999999999865 5788887778899998877 6
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 455 (538)
+++++|..-+.+..||++.++..........+.+.. +..+|.+.++++++-|+.+||+|..+
T Consensus 260 n~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirs-ih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 260 NFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRS-IHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred cEEEEecccchhheecccCceeeccccCCccCCcce-EEEcCCCceEEeeccceeEEEeeccc
Confidence 799999999999999999999877744333555555 58889999999999999999999664
No 240
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.39 E-value=4.3e-10 Score=100.47 Aligned_cols=232 Identities=14% Similarity=0.186 Sum_probs=149.6
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEE-EEeeCC------CcEEE
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL-YTGSGD------RTIKA 366 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~d------g~i~i 366 (538)
...+++|+.+.. .++.| .|.-.++|+.+.-+........... ..+..+-.-.+++ ++|+.+ ..|.|
T Consensus 7 ~~lsvs~NQD~S-cFava-~~~Gfriyn~~P~ke~~~r~~~~~G-----~~~veMLfR~N~laLVGGg~~pky~pNkviI 79 (346)
T KOG2111|consen 7 KTLSVSFNQDHS-CFAVA-TDTGFRIYNCDPFKESASRQFIDGG-----FKIVEMLFRSNYLALVGGGSRPKYPPNKVII 79 (346)
T ss_pred ceeEEEEccCCc-eEEEE-ecCceEEEecCchhhhhhhccccCc-----hhhhhHhhhhceEEEecCCCCCCCCCceEEE
Confidence 345588866443 44444 5566899988743221111111111 1122222334433 344433 47999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCCCEEEE-EeC
Q 009274 367 WSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV-SHE 444 (538)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 444 (538)
||-...+++.++. ...+|.++.+..+.+++.- ++.|++|... +.+.++.+.......-.++++-..+..+|+. |-.
T Consensus 80 WDD~k~~~i~el~-f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k 157 (346)
T KOG2111|consen 80 WDDLKERCIIELS-FNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK 157 (346)
T ss_pred EecccCcEEEEEE-eccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc
Confidence 9976777887776 6789999999977777665 5789999998 5566666654432222332333333344554 345
Q ss_pred CCcEEEEeCCc----ceeeeccccceEEEEEe--CCCEEEEEeCCCe-EEEEecCCCeeEeeeecCCcccCCCceEEEE-
Q 009274 445 SGSIKVWRNDK----FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKT-VSVQELAGDEFEEDVIPTGAIPCGSVITALL- 516 (538)
Q Consensus 445 dg~i~iwd~~~----~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 516 (538)
-|.|+|-|+.. ....+..|.+.|.|++. +|..+||+|..|+ |||||..+++......... ..+.+.++.
T Consensus 158 ~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~---d~A~iy~iaF 234 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV---DRADIYCIAF 234 (346)
T ss_pred cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC---chheEEEEEe
Confidence 69999999543 24678899999999987 9999999999997 7999999998776654332 233445554
Q ss_pred EeCCE-EEEEECCCeEEEEEcC
Q 009274 517 YWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 517 ~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
+++.. |+++|+.|+|+||.+.
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEee
Confidence 45555 6678889999999874
No 241
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.39 E-value=2.7e-11 Score=121.87 Aligned_cols=207 Identities=12% Similarity=0.139 Sum_probs=134.4
Q ss_pred CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC--CcEEEEEccCCCCCcceeeecccCCceeeeEEEE
Q 009274 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL 348 (538)
Q Consensus 271 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (538)
+..|.+||.+... .+.+..|...+.+..|+|++..++.+...+ ..|++||+.++... .+.....+. ...+|
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~-~l~~~~g~~-----~~~~w 255 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK-VVASFRGHN-----GAPAF 255 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE-EEecCCCcc-----CceeE
Confidence 4689999986544 566777888999999999877665544332 47999999765322 122222111 13589
Q ss_pred eecCCEEEEee-CCCcEEE--EECCCCceeEEecCCCCCeEEEEEe--CCEEE-EEecCCcEEEEECCCCc-eeEEEecC
Q 009274 349 TTSGRYLYTGS-GDRTIKA--WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLY-SGSRDGTIRLWSLSDHS-LLTVLEED 421 (538)
Q Consensus 349 ~~~~~~l~sg~-~dg~i~i--wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~-~~~~~~~~ 421 (538)
+|||+.|+.++ .+|.+.+ ||+.+++ ...+..+...+.+..|+ ++.++ ++..++...+|++.... ....+ .+
T Consensus 256 SPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~ 333 (429)
T PRK01742 256 SPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GG 333 (429)
T ss_pred CCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cC
Confidence 99999887764 6776555 4666655 44556677778889999 34555 44467888888875432 22222 22
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc-eeee-ccccceEEEEEeCCCEEEEEeCCCeEEEEec
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-MKSM-QTHKGSVFAVFLEGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~-~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~ 491 (538)
.. . ...|+|+|+.++..+.++ +.+||..+. ...+ ..+...-.+++++|++|++++.++.+.+|++
T Consensus 334 -~~--~-~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 334 -RG--Y-SAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred -CC--C-CccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 22 2 257999999998887765 556885432 2222 2222222345669999999999998888875
No 242
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.39 E-value=3e-13 Score=129.99 Aligned_cols=114 Identities=19% Similarity=0.328 Sum_probs=78.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+-|-||- |-++..+++.+ ...|+||.+|||||+| +. .....|.|||||||||+|||||+
T Consensus 248 ~d~VKIsDFGTS~e~~~~ST---kMSFaGTVaWMAPEvI------rn---------ePcsEKVDIwSfGVVLWEmLT~Ei 309 (904)
T KOG4721|consen 248 DDVVKISDFGTSKELSDKST---KMSFAGTVAWMAPEVI------RN---------EPCSEKVDIWSFGVVLWEMLTGEI 309 (904)
T ss_pred cceEEeccccchHhhhhhhh---hhhhhhhHhhhCHHHh------hc---------CCcccccceehhHHHHHHHHhcCC
Confidence 4466888 55688887743 6689999999999999 43 67889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||..-....|..=- ..+.+.+..+-. -|+. +.-++.+|+.-.|..||+...+..+
T Consensus 310 PYkdVdssAIIwGV---GsNsL~LpvPst--------cP~G--------fklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 310 PYKDVDSSAIIWGV---GSNSLHLPVPST--------CPDG--------FKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred CccccchheeEEec---cCCcccccCccc--------CchH--------HHHHHHHHHhcCCCCCccHHHHHHH
Confidence 99876555443100 000000111111 1111 5568888999999999997655543
No 243
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.38 E-value=1.9e-13 Score=121.18 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=80.6
Q ss_pred eeeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 10 TKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
|.+.||++ |+|..+-+- ++ -.-++.|||-|||||+++|..++ .++||||||++..||.-|+
T Consensus 164 T~G~AKLADFGVAGQLTDT-MA-KRNTVIGTPFWMAPEVI~EIGY~---------------~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDT-MA-KRNTVIGTPFWMAPEVIEEIGYD---------------TKADIWSLGITAIEMAEGR 226 (502)
T ss_pred ccchhhhhhccccchhhhh-HH-hhCccccCcccccHHHHHHhccc---------------hhhhHhhhcchhhhhhcCC
Confidence 67899999 788777643 22 14479999999999999766544 8999999999999999999
Q ss_pred -ccchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 -QFTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 -pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||..-.+. .|+.+-++ +++..+ .|+. +..+..+.+++||-+.|++|-++..+.+
T Consensus 227 PPYsDIHPMRAIFMIPT~----------PPPTF~--KPE~-------WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 227 PPYSDIHPMRAIFMIPTK----------PPPTFK--KPEE-------WSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCcccccccceeEeccCC----------CCCCCC--ChHh-------hhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 88765554 23322222 122211 1111 1113678999999999999988776655
No 244
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.38 E-value=6.8e-13 Score=129.91 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=80.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||||++ |.
T Consensus 210 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDiwslG~il~el~~~g~ 274 (338)
T cd05102 210 NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI------FD---------KVYTTQSDVWSFGVLLWEIFSLGA 274 (338)
T ss_pred CCcEEEeecccccccccCcchhcccCCCCCccccCcHHh------hc---------CCCCcccCHHHHHHHHHHHHhCCC
Confidence 4568888 677766543322223346678899999999 33 567899999999999999997 98
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.............+.. .... ........+.+++.+||..+|.+||+..++.+.+..++
T Consensus 275 ~pf~~~~~~~~~~~~~~~~-------~~~~------------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 275 SPYPGVQINEEFCQRLKDG-------TRMR------------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred CCCCCCCccHHHHHHHhcC-------CCCC------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 997643220000000000 0000 00111234778999999999999999999988877765
No 245
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=1.2e-13 Score=135.18 Aligned_cols=110 Identities=24% Similarity=0.315 Sum_probs=78.0
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
-||+ |.|...-+.. .+.+-||+|-|.|||++....|+ +.++||||.|||||.||||+ ||+
T Consensus 151 IKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYd--------------G~~sDVWSCGVILfALLtG~LPFd 213 (786)
T KOG0588|consen 151 IKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYD--------------GRPSDVWSCGVILFALLTGKLPFD 213 (786)
T ss_pred EeeeccceeecccCCc---cccccCCCcccCCchhhcCCCCC--------------CCccccchhHHHHHHHHhCCCCCC
Confidence 5888 5554433332 37789999999999999433333 46899999999999999999 999
Q ss_pred hhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
.++...++ ++++.. ...++. . ..++.+++|.++|..||..|.++.++.++
T Consensus 214 DdNir~LL-lKV~~G-----~f~MPs-----------~----Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 214 DDNIRVLL-LKVQRG-----VFEMPS-----------N----ISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred CccHHHHH-HHHHcC-----cccCCC-----------c----CCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 87666333 111111 111111 1 12237789999999999999999998874
No 246
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.37 E-value=1.4e-12 Score=121.55 Aligned_cols=224 Identities=15% Similarity=0.163 Sum_probs=170.2
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (538)
-..+.++ |.+++.|+..|.|-.+|+.+++....+. -...|.++.|..+. .+++. .....++|||-.. .....++
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHne-q~~AV-AQK~y~yvYD~~G-tElHClk 207 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNE-QFFAV-AQKKYVYVYDNNG-TELHCLK 207 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcch-HHHHh-hhhceEEEecCCC-cEEeehh
Confidence 4567776 9999999999999999999998888776 34678999998744 34444 4568899998542 2222222
Q ss_pred eecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECC
Q 009274 333 KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 410 (538)
..... .-+.|-|.--+|++++..|.++.-|+.+|+.+..+....+.+..+.-+ +..+-+|...|+|.+|...
T Consensus 208 ~~~~v------~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 208 RHIRV------ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred hcCch------hhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 22111 112455555688999999999999999999999998888888888877 6688899999999999999
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeecccc-ceEEEEEeCCCEEEEEeCCCeEEEE
Q 009274 411 DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHK-GSVFAVFLEGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~-~~v~~~~~~~~~l~sgs~dg~v~iw 489 (538)
..+++..+..| .+.+.+ +++.++|+++++.+.|..++|||++...+....+. -+...+++..+-++..|....|.||
T Consensus 282 skePLvKiLcH-~g~V~s-iAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~~G~~v~iw 359 (545)
T KOG1272|consen 282 SKEPLVKILCH-RGPVSS-IAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALSYGDHVQIW 359 (545)
T ss_pred CcchHHHHHhc-CCCcce-EEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccceeeecCCeeeee
Confidence 99988888776 455555 69999999999999999999999887553333222 3455667766666677777789999
Q ss_pred e
Q 009274 490 E 490 (538)
Q Consensus 490 d 490 (538)
.
T Consensus 360 ~ 360 (545)
T KOG1272|consen 360 K 360 (545)
T ss_pred h
Confidence 5
No 247
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.37 E-value=2.6e-13 Score=120.45 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=70.2
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
--|+- |+|++..+. +-++||||.|||||++ + ...++.++|-|||||+.|||+.|. ||
T Consensus 182 ~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii------~---------sk~ynkavDWWalGVLIYEMlaG~pPF 241 (355)
T KOG0616|consen 182 HIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEII------Q---------SKGYNKAVDWWALGVLIYEMLAGYPPF 241 (355)
T ss_pred cEEEEeccceEEecCc-----EEEecCCccccChHHh------h---------cCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 34555 889998877 4479999999999999 3 366888999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
...++..+..-.... ....+.. --+.+.+++.+.|+.|-.+|..
T Consensus 242 ~~~~~~~iY~KI~~~------~v~fP~~---------------fs~~~kdLl~~LL~vD~t~R~g 285 (355)
T KOG0616|consen 242 YDDNPIQIYEKILEG------KVKFPSY---------------FSSDAKDLLKKLLQVDLTKRFG 285 (355)
T ss_pred cCCChHHHHHHHHhC------cccCCcc---------------cCHHHHHHHHHHHhhhhHhhhc
Confidence 987665333000000 0000111 1112667888888888888854
No 248
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.37 E-value=3.4e-13 Score=128.60 Aligned_cols=109 Identities=16% Similarity=0.202 Sum_probs=71.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ....+||+.|||||++ .+ ..+++++|||||||+||+|++|+ |
T Consensus 139 ~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~------~~---------~~~~~~~DvwslGvil~el~~g~~p 200 (285)
T cd05631 139 GHIRISDLGLAVQIPEGET---VRGRVGTVGYMAPEVI------NN---------EKYTFSPDWWGLGCLIYEMIQGQSP 200 (285)
T ss_pred CCEEEeeCCCcEEcCCCCe---ecCCCCCCCccCHhhh------cC---------CCCCcccCchhHHHHHHHHHhCCCC
Confidence 467888 66666543322 3457899999999999 43 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|......... .....................+.+++.+||..+|.+|++.
T Consensus 201 f~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 201 FRKRKERVKR-----------------EEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred CCCCCcchhH-----------------HHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 9864322000 0000000000000001112247889999999999999984
No 249
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.37 E-value=3.2e-13 Score=138.07 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=77.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..+|+. |+++.............++||+.|||||++ .+ ..++.++|||||||+||||++|+
T Consensus 179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~------~~---------~~~s~k~DVwSlGvilyeLltG~~ 243 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW------RR---------KPYSKKADMFSLGVLLYELLTLKR 243 (496)
T ss_pred CCCEEEEecccCeeccccccccccccccCCcceeCHHHh------CC---------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 4568888 666665443222224468999999999999 44 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+.... ...... .........+.+++.+||..+|.+||+..++.+
T Consensus 244 Pf~~~~~~~~~~~~---------~~~~~~-----------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 244 PFDGENMEEVMHKT---------LAGRYD-----------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCCHHHHHHHH---------hcCCCC-----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 99876444111000 000000 000112234788999999999999999887765
No 250
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.36 E-value=5.1e-13 Score=127.37 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=78.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+...+.........+++.|||||++ .+ ..+++++|||||||+||||++ |.
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDv~slG~il~el~~~g~~ 225 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI------LY---------GKFTTESDIWSFGVVLWEIFSYGLQ 225 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHh------cc---------CcCchhhhHHHHHHHHHHHHcCCCC
Confidence 357887 556655433322224457789999999998 32 567899999999999999998 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.+.....+.... ...... . ........+.+++.+|++.+|.+||+..++.+.+..
T Consensus 226 p~~~~~~~~~~~~i---------~~~~~~-------~----~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 226 PYYGFSNQEVIEMI---------RSRQLL-------P----CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCCHHHHHHHH---------HcCCcC-------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 99875444111000 000000 0 001112347889999999999999999998876643
No 251
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=5.2e-13 Score=129.44 Aligned_cols=130 Identities=18% Similarity=0.247 Sum_probs=87.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+-.||+. |||+..+..+.. ..+...||.+|+|||++ ..+.++.++|||||||+|.||+||+
T Consensus 213 ~~~aKlsDFGLa~~~~~~~~~-~~~~~~gt~gY~~PEy~---------------~~g~lt~KsDVySFGVvllElitgr~ 276 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGDTS-VSTTVMGTFGYLAPEYA---------------STGKLTEKSDVYSFGVVLLELITGRK 276 (361)
T ss_pred CCCEEccCccCcccCCccccc-eeeecCCCCccCChhhh---------------ccCCcCcccccccchHHHHHHHhCCc
Confidence 4579998 778555541222 12222999999999999 3378899999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-Cccc------hHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFV------SLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+...+. ...+++.|..+..-.....++.++.+. .... .+..+..+|++.+|..||.+.++.+
T Consensus 277 ~~d~~~~~---------~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 277 AVDQSRPR---------GELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred ccCCCCCc---------ccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 77754322 111233443333223345566665543 2222 2677889999999999999998877
Q ss_pred HHHHh
Q 009274 161 CIREL 165 (538)
Q Consensus 161 ~l~~l 165 (538)
.+..+
T Consensus 348 ~L~~~ 352 (361)
T KOG1187|consen 348 ELEGI 352 (361)
T ss_pred HHHhh
Confidence 66444
No 252
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.36 E-value=5e-13 Score=129.77 Aligned_cols=108 Identities=21% Similarity=0.357 Sum_probs=75.9
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchh
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (538)
+....|+..|||||+++. + + ...|+++|||||||+|+|||+||. ||....+..|++.....
T Consensus 547 ~~qp~gsilwmAPEvIRm--q--------d--~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG------ 608 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRM--Q--------D--DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRG------ 608 (678)
T ss_pred cCCCccchhhhcHHHHhh--c--------c--cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccc------
Confidence 445789999999999941 1 1 367889999999999999999999 99976666555222111
Q ss_pred hcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
+. .+. ... .+.....++.+++..|+.++++.||...++...+..++.
T Consensus 609 ~l--~pd----~s~----~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 YL--MPD----LSK----IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cc--Ccc----chh----hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 00 000 100 111122247889999999999999999998887776653
No 253
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.36 E-value=3.9e-09 Score=105.28 Aligned_cols=264 Identities=15% Similarity=0.082 Sum_probs=168.0
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc
Q 009274 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (538)
Q Consensus 258 l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (538)
+...++.++.++.+|.+..+|.++|+.+...+.......+.... + ..++.+..++.+.-+|..+++...........
T Consensus 116 ~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~--~-~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~ 192 (394)
T PRK11138 116 VTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVS--D-GLVLVHTSNGMLQALNESDGAVKWTVNLDVPS 192 (394)
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEE--C-CEEEEECCCCEEEEEEccCCCEeeeecCCCCc
Confidence 44557888888899999999999999998876543222222221 2 34566778899999999887655443321110
Q ss_pred CCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----------CeEEEEEeCCEEEEEecCCcEEE
Q 009274 338 KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----------AVSTLAVCNGVLYSGSRDGTIRL 406 (538)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~l~~~~~~l~s~s~dg~i~i 406 (538)
.... ........+..++.++.+|.+..+|..+|+.++....... ...+....++.++.++.+|.+..
T Consensus 193 ~~~~--~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~a 270 (394)
T PRK11138 193 LTLR--GESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVA 270 (394)
T ss_pred cccc--CCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEE
Confidence 0000 0000111244677788899999999999988776532110 01222334788888889999999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccc--c-ceEEEEEeCCCEEEEEeCC
Q 009274 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTH--K-GSVFAVFLEGKWLFTGGWD 483 (538)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h--~-~~v~~~~~~~~~l~sgs~d 483 (538)
+|..+|+.+.+...... . .....+..++.++.+|.+..+|..+-...++.. . ....+....+..|+.++.|
T Consensus 271 ld~~tG~~~W~~~~~~~---~---~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~ 344 (394)
T PRK11138 271 LDLRSGQIVWKREYGSV---N---DFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSE 344 (394)
T ss_pred EECCCCCEEEeecCCCc---c---CcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCC
Confidence 99999998776543211 1 111246678888889999999865432222211 1 1112222356778889999
Q ss_pred CeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEc
Q 009274 484 KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 484 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
|.+++.|..+++......... ..........+++|++++.||.|+.++.
T Consensus 345 G~l~~ld~~tG~~~~~~~~~~----~~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 345 GYLHWINREDGRFVAQQKVDS----SGFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CEEEEEECCCCCEEEEEEcCC----CcceeCCEEECCEEEEEeCCceEEEEeC
Confidence 999999999998776554321 1122222345889999999999998864
No 254
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.36 E-value=4.3e-13 Score=129.66 Aligned_cols=114 Identities=14% Similarity=0.100 Sum_probs=73.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 130 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslGvil~el~tg~~p 192 (312)
T cd05585 130 GHIALCDFGLCKLNMKDDD--KTNTFCGTPEYLAPELL------LG---------HGYTKAVDWWTLGVLLYEMLTGLPP 192 (312)
T ss_pred CcEEEEECcccccCccCCC--ccccccCCcccCCHHHH------cC---------CCCCCccceechhHHHHHHHhCCCC
Confidence 457887 45554332221 24468899999999999 43 55788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|.......+.... ..... .........+.+++.+||..+|.+||+...+.+.+.
T Consensus 193 f~~~~~~~~~~~~---------~~~~~------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 193 FYDENVNEMYRKI---------LQEPL------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred cCCCCHHHHHHHH---------HcCCC------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 9765433111000 00000 000011224778999999999999997655444333
No 255
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.35 E-value=2.8e-13 Score=127.67 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=77.2
Q ss_pred eeeeec--cccccc-----cccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhh
Q 009274 12 SVAKVG--CVGSRI-----CDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLL 84 (538)
Q Consensus 12 ~~~~~~--~~~~~~-----~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~ll 84 (538)
+.+||+ |++-.. .+.+. .+..-+|||+|||||.+-+. ......+.+-|||||||+||.||
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~--~L~~tvGTPAF~APE~c~~~-----------~~~~~~g~a~DiWalGVTLYCll 313 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDD--QLSRTVGTPAFFAPELCSGG-----------NSFSYSGFALDIWALGVTLYCLL 313 (576)
T ss_pred CcEEeeccceeeecccCCccccHH--HHhhcCCCccccchHhhcCC-----------CCccccchhhhhhhhhhhHHHhh
Confidence 678999 555433 22222 36679999999999999221 11345567899999999999999
Q ss_pred hcC-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 85 IGE-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 85 tg~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.|+ ||-++....+. .+. +.. +..+ . .+++ ...+.++|.++|.++|++|....++..
T Consensus 314 fG~~PF~~~~~~~l~~KIv--n~p----L~fP----~--~pe~--------~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 314 FGQLPFFDDFELELFDKIV--NDP----LEFP----E--NPEI--------NEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hccCCcccchHHHHHHHHh--cCc----ccCC----C--cccc--------cHHHHHHHHHHhhcChhheeehhhhee
Confidence 999 99987555333 011 000 0000 0 0111 123788999999999999999887755
No 256
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.35 E-value=6.3e-13 Score=129.29 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=73.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|.
T Consensus 132 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~ 194 (325)
T cd05602 132 QGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVL------HK---------QPYDRTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred CCCEEEccCCCCcccccCCC--CcccccCCccccCHHHH------cC---------CCCCCccccccccHHHHHHhcCCC
Confidence 4567888 55554332221 14468899999999999 43 56788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
||.......+. . .+...+....+.....+.+++.+||..+|.+|++..+..
T Consensus 195 pf~~~~~~~~~-----------------~----~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 195 PFYSRNTAEMY-----------------D----NILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCCHHHHH-----------------H----HHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 99865433111 0 000000000111223478899999999999999976443
No 257
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.35 E-value=4.7e-13 Score=130.00 Aligned_cols=106 Identities=15% Similarity=0.185 Sum_probs=69.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++...... .....++||+.|||||++ .+ ..++.++|||||||+||||++|+
T Consensus 131 ~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltg~~ 193 (323)
T cd05571 131 DGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRL 193 (323)
T ss_pred CCCEEEeeCCCCcccccCC--CcccceecCccccChhhh------cC---------CCCCccccCcccchhhhhhhcCCC
Confidence 3467888 5555432221 124568999999999998 43 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||.......+.... ...... . .......+.+++.+||..+|.+||+
T Consensus 194 Pf~~~~~~~~~~~~---------~~~~~~-----~-------p~~~~~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 194 PFYNQDHEKLFELI---------LMEEIR-----F-------PRTLSPEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred CCCCCCHHHHHHHH---------HcCCCC-----C-------CCCCCHHHHHHHHHHccCCHHHcCC
Confidence 99765433211000 000000 0 0011224778999999999999994
No 258
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1.7e-13 Score=119.95 Aligned_cols=114 Identities=14% Similarity=0.196 Sum_probs=80.7
Q ss_pred cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhh
Q 009274 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (538)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~ 96 (538)
|+|-++++.++ ++++||||+|+|||.+.=.++. ..-.|+...|+|++||++|.||.|- ||-..-+.+
T Consensus 168 GFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e---------~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml 235 (411)
T KOG0599|consen 168 GFACQLEPGEK---LRELCGTPGYLAPETIKCSMYE---------NHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML 235 (411)
T ss_pred ceeeccCCchh---HHHhcCCCcccChhheeeeccc---------CCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence 89999999987 8999999999999998333322 2345677899999999999999999 998764443
Q ss_pred eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
++...-+.+ +....+.|.. + ..+..+++.++|..+|.+|.++.+...
T Consensus 236 MLR~ImeGk-----yqF~speWad----i--------s~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 236 MLRMIMEGK-----YQFRSPEWAD----I--------SATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHhcc-----cccCCcchhh----c--------cccHHHHHHHHHeeCchhcccHHHHhc
Confidence 331110000 1222222222 2 223677999999999999999876554
No 259
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.34 E-value=3.9e-10 Score=108.14 Aligned_cols=270 Identities=15% Similarity=0.197 Sum_probs=171.5
Q ss_pred cCCCcEEEEEEc--CCE-EEEEeCCCcEEEEeCCCCceEEEEecCC-cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 250 GHRDCVTGLAVG--GGF-LFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
+|...-+.|..+ |+| ++||.+.-.|++||+.+... .|.-|. ..+..+....++-.-++--..|.+|-+-.-..
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSL--KFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G- 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSL--KFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG- 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEccccee--eeeecccccceeEEEeccchhhheEeecCceeeehhhcC-
Confidence 366667778887 665 56777889999999976433 333342 33333333333332334444555555432110
Q ss_pred CCCcceeeecccCCceeeeEEEEe-ecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALT-TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG 402 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg 402 (538)
....++..... .-++++ |+.. |+.++....|+-+++..|+-+..+....+.++++..+ .++|++|+.||
T Consensus 126 -~hy~~RIP~~G------RDm~y~~~scD-ly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g 197 (703)
T KOG2321|consen 126 -RHYRTRIPKFG------RDMKYHKPSCD-LYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDG 197 (703)
T ss_pred -eeeeeecCcCC------ccccccCCCcc-EEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCc
Confidence 00001100000 011222 2333 4444455679999999999999998888999999998 77999999999
Q ss_pred cEEEEECCCCceeEEEecCCC---------CceEEEEEEcCCCCEEEEEeCCCcEEEEeCCccee-eecc--ccceEEEE
Q 009274 403 TIRLWSLSDHSLLTVLEEDSS---------GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK-SMQT--HKGSVFAV 470 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~--h~~~v~~~ 470 (538)
.+..||.++...+.++..... ....+.+.|+.+|-.+++|+.+|.+.|||++...- ..+. ..-+|..+
T Consensus 198 ~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l 277 (703)
T KOG2321|consen 198 VVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKL 277 (703)
T ss_pred eEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeee
Confidence 999999999887776654322 12234478999999999999999999999764222 2233 34577788
Q ss_pred Ee----CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEEEEc
Q 009274 471 FL----EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 471 ~~----~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~vw~~ 536 (538)
.| +++.++|. ....++|||-.+++......+...+ ...+.++ .|.+++|-.++.+..|-+
T Consensus 278 ~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~l-----ND~C~~p~sGm~f~Ane~~~m~~yyi 342 (703)
T KOG2321|consen 278 DWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDL-----NDFCFVPGSGMFFTANESSKMHTYYI 342 (703)
T ss_pred cccccCCCceEEec-chHHhhhcccccCCceeeccccCCc-----CceeeecCCceEEEecCCCcceeEEc
Confidence 87 23455554 4568999999999876665554332 2233444 667888888887766543
No 260
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.34 E-value=7e-13 Score=128.82 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=72.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|.
T Consensus 132 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ell~g~~ 194 (323)
T cd05575 132 QGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVL------RK---------QPYDRTVDWWCLGAVLYEMLYGLP 194 (323)
T ss_pred CCcEEEeccCCCcccccCCC--ccccccCChhhcChhhh------cC---------CCCCccccccccchhhhhhhcCCC
Confidence 3467888 55554322221 24568899999999998 43 56788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
||.......+.. .+........+.....+.+++.+||+.+|.+||++...
T Consensus 195 pf~~~~~~~~~~---------------------~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (323)
T cd05575 195 PFYSRDTAEMYD---------------------NILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDD 244 (323)
T ss_pred CCCCCCHHHHHH---------------------HHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCC
Confidence 998754431110 00000000001112247789999999999999997643
No 261
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.33 E-value=2.6e-13 Score=142.34 Aligned_cols=120 Identities=18% Similarity=0.305 Sum_probs=77.2
Q ss_pred eeeeeeeccc--cccccc--cchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 10 TKSVAKVGCV--GSRICD--KEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 10 ~~~~~~~~~~--~~~~~~--~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
-+|+-|.+.+ |..+.+ .+++-.+.+++|||.|||||++ -|. .. ..-+-+.||||||||+.||.|
T Consensus 1369 ~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvi------t~t---~~---kG~~~A~DiWslGCVVlEM~t 1436 (1509)
T KOG4645|consen 1369 FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVI------TGT---KG---KGHGGAADIWSLGCVVLEMAT 1436 (1509)
T ss_pred cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhh------ccc---cc---CCCCcchhhhcccceEEEeec
Confidence 3678888844 444332 2344557889999999999999 331 11 223458999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|+ |+...+-. ..-++..-.+..|++|.. --..-.+.+.+||..||.+|..+.++.+
T Consensus 1437 GkrPW~~~dne---------------~aIMy~V~~gh~Pq~P~~----ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1437 GKRPWAELDNE---------------WAIMYHVAAGHKPQIPER----LSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCCchhhccch---------------hHHHhHHhccCCCCCchh----hhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 99 99875333 111122222222332222 1123567999999999999966655443
No 262
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.33 E-value=6.1e-13 Score=129.79 Aligned_cols=122 Identities=16% Similarity=0.187 Sum_probs=80.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.............|++.|||||++ .+ ..++.++|||||||+||+|++ |.
T Consensus 210 ~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~SlGv~l~el~t~g~~ 274 (337)
T cd05054 210 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI------FD---------KVYTTQSDVWSFGVLLWEIFSLGAS 274 (337)
T ss_pred CcEEEeccccchhcccCcchhhccCCCCCccccCcHHh------cC---------CCCCccccHHHHHHHHHHHHHcCCC
Confidence 457888 566766443322223356778899999998 33 567899999999999999998 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.+....... .. ...... ..........++.+++.+||+.+|.+||+..++.+.+.+++.
T Consensus 275 p~~~~~~~~~~-------------~~---~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 275 PYPGVQIDEEF-------------CR---RLKEGT---RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCCCCCccHHH-------------HH---HHhccC---CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99753221000 00 000000 000001122347789999999999999999999998887764
No 263
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.33 E-value=8.2e-13 Score=134.97 Aligned_cols=115 Identities=19% Similarity=0.232 Sum_probs=77.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+.+..........+||+.|||||++ .+ ..++.++|||||||++|+|++|+
T Consensus 205 ~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~el~tg~~ 269 (478)
T PTZ00267 205 TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW------ER---------KRYSKKADMWSLGVILYELLTLHR 269 (478)
T ss_pred CCcEEEEeCcCceecCCccccccccccCCCccccCHhHh------CC---------CCCCcHHhHHHHHHHHHHHHhCCC
Confidence 4567887 677776544322234568899999999998 33 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.......+.... ...... .........+.+++.+||..+|.+||++.++..
T Consensus 270 Pf~~~~~~~~~~~~---------~~~~~~-----------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 270 PFKGPSQREIMQQV---------LYGKYD-----------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCCHHHHHHHH---------HhCCCC-----------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 99865443111000 000000 000011124788999999999999999877653
No 264
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.32 E-value=9.5e-13 Score=127.92 Aligned_cols=105 Identities=17% Similarity=0.148 Sum_probs=70.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ....++||+.|||||++ .+ ..++.++|||||||++|+|+||+ |
T Consensus 138 ~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~elltg~~P 200 (323)
T cd05616 138 GHIKIADFGMCKENMWDGV--TTKTFCGTPDYIAPEII------AY---------QPYGKSVDWWAFGVLLYEMLAGQAP 200 (323)
T ss_pred CcEEEccCCCceecCCCCC--ccccCCCChhhcCHHHh------cC---------CCCCCccchhchhHHHHHHHhCCCC
Confidence 457888 55554332211 24468899999999999 43 56789999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|.+.....+. .+. ..... .+ .....++.+++.+||..+|.+|++.
T Consensus 201 f~~~~~~~~~~~i~----------~~~~~--------~p----~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 201 FEGEDEDELFQSIM----------EHNVA--------YP----KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCHHHHHHHHH----------hCCCC--------CC----CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 9876444211 000 00000 00 0111236789999999999999985
No 265
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.32 E-value=8.9e-13 Score=128.35 Aligned_cols=103 Identities=18% Similarity=0.180 Sum_probs=70.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++...+.. ....||+.|||||++ .+ ..++.++|||||||+||+|++|+
T Consensus 154 ~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~ 213 (329)
T PTZ00263 154 KGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVI------QS---------KGHGKAVDWWTMGVLLYEFIAGYP 213 (329)
T ss_pred CCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHH------cC---------CCCCCcceeechHHHHHHHHcCCC
Confidence 4567888 6677665442 257899999999999 43 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.......+.. ....... ..+. ....+.+++.+||..+|.+|++.
T Consensus 214 pf~~~~~~~~~~-----------------~i~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 214 PFFDDTPFRIYE-----------------KILAGRL-----KFPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCHHHHHH-----------------HHhcCCc-----CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 997654431110 0000000 0000 11236789999999999999974
No 266
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.32 E-value=1.3e-12 Score=125.13 Aligned_cols=119 Identities=15% Similarity=0.237 Sum_probs=79.3
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+.+ +++...............|++.|||||++ .+ ..++.++|||||||++|+|+| |.
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~~ 224 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI------MY---------RKFTTESDVWSFGVILWEIFTYGKQ 224 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHh------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 4678884 55554433322223456789999999998 33 557789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||......... .+. . .... .........+.+++.+||..+|.+||++.++.+.+.++.
T Consensus 225 p~~~~~~~~~~~~~~---~-------~~~~-----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 225 PWFQLSNTEVIECIT---Q-------GRVL-----------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred CCCCCCHHHHHHHHh---C-------CCCC-----------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 98765333111 000 0 0000 000011224788999999999999999999999888774
No 267
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.32 E-value=1.5e-12 Score=124.10 Aligned_cols=116 Identities=14% Similarity=0.148 Sum_probs=75.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
.-+|+. |+++.+.............+++.|||||++ .+ +.++.++|||||||++|||++ |.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~el~~~g~~ 225 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAI------MY---------GKFSIDSDIWSYGVVLWEVFSYGLQ 225 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHH------hc---------CCCCcchhHHHHHHHHHHHHcCCCC
Confidence 346888 555655433322223456778999999998 32 557789999999999999998 77
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.+.....+.. .+........+. ....+.+++.+|++.+|.+||+..++...++
T Consensus 226 p~~~~~~~~~~~---------------------~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 226 PYCGYSNQDVIE---------------------MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred CCCCCCHHHHHH---------------------HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 887654331110 000000000011 1223778999999999999999998887654
No 268
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.32 E-value=2.5e-12 Score=127.33 Aligned_cols=120 Identities=16% Similarity=0.215 Sum_probs=78.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.......+.....+++.|||||++ .+ ..++.++|||||||+||+|++ |+
T Consensus 249 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwSlGvil~ellt~G~~ 313 (374)
T cd05106 249 RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI------FD---------CVYTVQSDVWSYGILLWEIFSLGKS 313 (374)
T ss_pred CeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh------cC---------CCCCccccHHHHHHHHHHHHhCCCC
Confidence 468888 566655433221112234567889999998 32 567899999999999999997 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||......... .. .... ...... .....++.+++.+||+.+|.+||+..++.+.+.++.
T Consensus 314 Pf~~~~~~~~~-------------~~---~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 314 PYPGILVNSKF-------------YK---MVKR----GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCccccccHHH-------------HH---HHHc----ccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 99764322000 00 0000 000000 011235788999999999999999999999887754
No 269
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.32 E-value=1.1e-12 Score=127.30 Aligned_cols=108 Identities=17% Similarity=0.155 Sum_probs=71.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.....+. .....+||+.|||||++ .+ ..++.++|||||||+||+|++|.
T Consensus 132 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~ 194 (321)
T cd05603 132 QGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVL------RK---------EPYDRTVDWWCLGAVLYEMLYGLP 194 (321)
T ss_pred CCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHh------cC---------CCCCCcCcccccchhhhhhhcCCC
Confidence 4568888 45554322221 14468899999999998 33 55788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||...+...+. ..+...+..........+.+++.+||..+|.+|++..
T Consensus 195 pf~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 195 PFYSRDVSQMY---------------------DNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHH---------------------HHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 99875433111 0000000000011222477899999999999999865
No 270
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.32 E-value=9e-13 Score=125.92 Aligned_cols=66 Identities=27% Similarity=0.470 Sum_probs=50.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... ......||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslGvil~el~~g~~p 200 (287)
T cd07848 137 DVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRSPELL------LG---------APYGKAVDMWSVGCILGELSDGQPL 200 (287)
T ss_pred CcEEEeeccCcccccccccc-cccccccccccCCcHHH------cC---------CCCCCchhHHhHHHHHHHHHhCCCC
Confidence 467888 566665433221 13457899999999999 33 45778999999999999999999 9
Q ss_pred cchhh
Q 009274 89 FTKEL 93 (538)
Q Consensus 89 f~~~~ 93 (538)
|.+..
T Consensus 201 f~~~~ 205 (287)
T cd07848 201 FPGES 205 (287)
T ss_pred CCCCC
Confidence 98643
No 271
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.31 E-value=1.1e-12 Score=127.22 Aligned_cols=108 Identities=16% Similarity=0.104 Sum_probs=71.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 133 ~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~P 195 (320)
T cd05590 133 GHCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEIL------QE---------MLYGPSVDWWAMGVLLYEMLCGHAP 195 (320)
T ss_pred CcEEEeeCCCCeecCcCCC--cccccccCccccCHHHH------cC---------CCCCCccchhhhHHHHHHHhhCCCC
Confidence 467888 45554322211 24568899999999999 33 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.......+.... ...... ........+.+++.+||..+|.+|+++.+
T Consensus 196 f~~~~~~~~~~~i---------~~~~~~------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 196 FEAENEDDLFEAI---------LNDEVV------------YPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred CCCCCHHHHHHHH---------hcCCCC------------CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 9876444211000 000000 00011223778999999999999999854
No 272
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.31 E-value=1.5e-12 Score=126.04 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=70.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+.+ +++....... ....++||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~el~~g~~P 195 (316)
T cd05620 133 GHIKIADFGMCKENVFGDN--RASTFCGTPDYIAPEIL------QG---------LKYTFSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred CCEEeCccCCCeecccCCC--ceeccCCCcCccCHHHH------cC---------CCCCcccchhhhHHHHHHHHhCCCC
Confidence 4678884 4443221111 14468899999999999 43 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.......+. . ......+..+ ......+.+++.+||..+|.+|++..
T Consensus 196 f~~~~~~~~~--------------~---~~~~~~~~~~----~~~~~~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 196 FHGDDEDELF--------------E---SIRVDTPHYP----RWITKESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred CCCCCHHHHH--------------H---HHHhCCCCCC----CCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 9865443111 0 0000000000 01122477899999999999999874
No 273
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.31 E-value=1.3e-12 Score=125.04 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=68.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...+. ....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 138 ~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~~l~~g~~p 197 (291)
T cd05612 138 GHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVI------QS---------KGHNKAVDWWALGILIYEMLVGYPP 197 (291)
T ss_pred CCEEEEecCcchhccCC-----cccccCChhhcCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 456787 566665443 2357899999999998 43 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.......+.... ..... ..+ .....+.+++.+||..+|.+|++
T Consensus 198 f~~~~~~~~~~~i---------~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 198 FFDDNPFGIYEKI---------LAGKL-------------EFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCCCCHHHHHHHH---------HhCCc-------------CCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 9875443111000 00000 000 01224778999999999999997
No 274
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.30 E-value=1.5e-12 Score=127.20 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=69.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.....+... ...++||+.|||||++ .+ ...++.++|||||||+||+|+||. |
T Consensus 142 ~~~kl~DfG~~~~~~~~~~~~-~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~elltg~~p 206 (332)
T cd05614 142 GHVVLTDFGLSKEFLSEEKER-TYSFCGTIEYMAPEII------RG--------KGGHGKAVDWWSLGILIFELLTGASP 206 (332)
T ss_pred CCEEEeeCcCCccccccCCCc-cccccCCccccCHHHh------cC--------CCCCCCccccccchhhhhhhhcCCCC
Confidence 467888 5666554333221 3358899999999998 33 133678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|......... .....................+.+++.+||..+|.+||++.
T Consensus 207 f~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 207 FTLEGERNTQ-----------------SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred CCCCCCCCCH-----------------HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 9753221000 00000000000000011122477899999999999999654
No 275
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.30 E-value=3.1e-11 Score=114.88 Aligned_cols=165 Identities=19% Similarity=0.269 Sum_probs=115.2
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee--cCCEEEEeeCCC
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDR 362 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg 362 (538)
.+.+.+|++.|+++.|+. ++.+|++|+.|-.+.|||.-..+....+. ..+...+.++ .|-| +.+.+++|..|.
T Consensus 43 E~eL~GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~---TgHtaNIFsv-KFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSIS---TGHTANIFSV-KFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhhccccceecceeecC-CCCEEeecCCcceEEeecchhcceeeeee---cccccceeEE-eeeccCCCeEEEeccCcc
Confidence 456789999999999987 45588999999999999987443333332 2222222222 3334 344899999999
Q ss_pred cEEEEECCCC----------ceeEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCcee-------EEEec-C
Q 009274 363 TIKAWSLLDG----------TLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLL-------TVLEE-D 421 (538)
Q Consensus 363 ~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~-------~~~~~-~ 421 (538)
.|+++|+... +....+..|...|..++.. ++.+.+++.||+|+-+|++....- ..+.. .
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 9999999742 3344556788899888887 469999999999999999863211 11100 0
Q ss_pred CCCceEEEEEEcCC-CCEEEEEeCCCcEEEEeCC
Q 009274 422 SSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 422 ~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 454 (538)
..-....++.++|. ..+|++|+.|-..++||.+
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 01112334677775 5689999999999999943
No 276
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.30 E-value=9e-13 Score=128.20 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=69.3
Q ss_pred eeeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+.+ +++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|+||+
T Consensus 132 ~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~tG~~ 194 (325)
T cd05594 132 DGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRL 194 (325)
T ss_pred CCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHH------cc---------CCCCCccccccccceeeeeccCCC
Confidence 34688884 4444322211 24567899999999999 44 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||.......+.... ...... ........+.+++.+||..+|.+|+.
T Consensus 195 Pf~~~~~~~~~~~i---------~~~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~ 240 (325)
T cd05594 195 PFYNQDHEKLFELI---------LMEEIR------------FPRTLSPEAKSLLSGLLKKDPKQRLG 240 (325)
T ss_pred CCCCCCHHHHHHHH---------hcCCCC------------CCCCCCHHHHHHHHHHhhcCHHHhCC
Confidence 99765433111000 000000 00011234778999999999999973
No 277
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.30 E-value=1.3e-12 Score=127.20 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=69.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+
T Consensus 131 ~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~elltG~~ 193 (328)
T cd05593 131 DGHIKITDFGLCKEGITDAA--TMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRL 193 (328)
T ss_pred CCcEEEecCcCCccCCCccc--ccccccCCcCccChhhh------cC---------CCCCccCCccccchHHHHHhhCCC
Confidence 3467888 55554332221 14468899999999998 43 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||.......+.... ...... .+ ......+.+++.+||..+|.+|+.
T Consensus 194 Pf~~~~~~~~~~~~---------~~~~~~-----~p-------~~~~~~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 194 PFYNQDHEKLFELI---------LMEDIK-----FP-------RTLSADAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred CCCCCCHHHHHHHh---------ccCCcc-----CC-------CCCCHHHHHHHHHHcCCCHHHcCC
Confidence 99765433111000 000000 00 011123778999999999999984
No 278
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.30 E-value=1.4e-12 Score=126.70 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=69.5
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.++ ++....... ....++||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 138 GFVKIADFGLCKEGMGFGD--RTSTFCGTPEFLAPEVL------TE---------TSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred CcEEeCcccCCccCCCCCC--cccccccCccccCHhHh------cC---------CCCCcccchhhHHHHHHHHHhCCCC
Confidence 45788844 443322211 14468999999999998 43 55778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.+.....+. .+. ..... ........+.+++.+||..+|.+||+..
T Consensus 201 f~~~~~~~~~~~i~----------~~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 201 FPGDDEEEVFDSIV----------NDEVR------------YPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred CCCCCHHHHHHHHH----------hCCCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 9875443111 000 00000 0001112367899999999999999754
No 279
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.30 E-value=1.2e-12 Score=125.14 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=74.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...... ......||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 147 ~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~~ 208 (290)
T cd07862 147 GQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVL------LQ---------SSYATPVDLWSVGCIFAEMFRRKPL 208 (290)
T ss_pred CCEEEccccceEeccCCc---ccccccccccccChHHH------hC---------CCCCCccchHHHHHHHHHHHcCCCC
Confidence 457888 5565554332 24468899999999998 33 45778999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHH-----------HHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKV-----------TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.+.... .+..+.. .. ....+..+.... ...+....+.....+.+++.+||+.+|++||++.
T Consensus 209 f~~~~~~~~~~~i~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 282 (290)
T cd07862 209 FRGSSDVDQLGKILD--VI----GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 282 (290)
T ss_pred cCCCCHHHHHHHHHH--Hh----CCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH
Confidence 9865332 1110000 00 000000000000 0000000011223467899999999999999988
Q ss_pred hHHH
Q 009274 157 NVWK 160 (538)
Q Consensus 157 ~~~~ 160 (538)
++.+
T Consensus 283 ~~l~ 286 (290)
T cd07862 283 SALS 286 (290)
T ss_pred HHhc
Confidence 7654
No 280
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.30 E-value=2e-12 Score=123.49 Aligned_cols=120 Identities=13% Similarity=0.237 Sum_probs=78.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+. |+++.+.............|++.|||||++ .+ ..++.++|||||||++|+|+| |.
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDiwslG~il~~l~t~g~ 220 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI------MY---------RKFTTESDVWSLGVVLWEIFTYGK 220 (288)
T ss_pred CCcEEeccCCccccccCCceeecCCCCCccccccCHHHh------cc---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3457887 555555433322223345678999999998 33 457789999999999999999 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+. .. . .+ .........+.+++.+||+.+|.+||+..++...+..+
T Consensus 221 ~p~~~~~~~~~~~~i~--~~-------~--------~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 221 QPWYQLSNNEVIECIT--QG-------R--------VL----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CCCCCCCHHHHHHHHH--cC-------C--------cC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 98765333111 000 00 0 00 00011223588899999999999999999988877766
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 280 ~ 280 (288)
T cd05093 280 A 280 (288)
T ss_pred H
Confidence 4
No 281
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.30 E-value=1.6e-12 Score=125.74 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=70.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 133 ~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ell~G~~P 195 (316)
T cd05592 133 GHIKIADFGMCKENMNGEG--KASTFCGTPDYIAPEIL------KG---------QKYNESVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred CCEEEccCcCCeECCCCCC--ccccccCCccccCHHHH------cC---------CCCCCcccchhHHHHHHHHHhCCCC
Confidence 456887 55654432221 14468899999999999 44 45788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.+.....+.. ......+.. .......+.+++.+||..+|.+||+..
T Consensus 196 f~~~~~~~~~~-----------------~i~~~~~~~----~~~~~~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 196 FHGEDEDELFD-----------------SILNDRPHF----PRWISKEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred CCCCCHHHHHH-----------------HHHcCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 98754431110 000000000 001112367899999999999999864
No 282
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.30 E-value=4.3e-10 Score=108.59 Aligned_cols=200 Identities=14% Similarity=0.207 Sum_probs=146.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecC---CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccC
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGH---DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEK 338 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 338 (538)
..++|....||.+|+||...++....|... ++...+..| .+.-............
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w--------------------~L~~~~s~~k~~~~~~-- 62 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKW--------------------GLSADYSPMKWLSLEK-- 62 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEE--------------------EEEeccchHHHHhHHH--
Confidence 568999999999999999988877766421 233333333 3221111111111000
Q ss_pred CceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCce
Q 009274 339 DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL 414 (538)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~ 414 (538)
....+.+-..++-|...|.|.+|++..++....+. .|.+.|+++.++ -+.|.+++.|+.+..|+....+.
T Consensus 63 ------~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~ 136 (541)
T KOG4547|consen 63 ------AKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVI 136 (541)
T ss_pred ------HhhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccccee
Confidence 11223334488899999999999999999888874 689999999998 44999999999999999999999
Q ss_pred eEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--C-----CCEEEE-EeCCC
Q 009274 415 LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--E-----GKWLFT-GGWDK 484 (538)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~-----~~~l~s-gs~dg 484 (538)
.+.+....... ..++++||+..+++++. .|++||. .+.+..+.+|.++|.+++| + |.++.+ ...+.
T Consensus 137 ~~~~~~~~~~~--~sl~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r 212 (541)
T KOG4547|consen 137 IRIWKEQKPLV--SSLCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAER 212 (541)
T ss_pred eeeeccCCCcc--ceEEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccccc
Confidence 98888764433 33799999999998875 7999995 4678999999999999988 3 455554 44566
Q ss_pred eEEEEecCC
Q 009274 485 TVSVQELAG 493 (538)
Q Consensus 485 ~v~iwd~~~ 493 (538)
.+.+|-+..
T Consensus 213 ~i~~w~v~~ 221 (541)
T KOG4547|consen 213 GITVWVVEK 221 (541)
T ss_pred ceeEEEEEc
Confidence 788887765
No 283
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.30 E-value=1.6e-12 Score=137.97 Aligned_cols=112 Identities=21% Similarity=0.298 Sum_probs=74.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
.++|+. |+++.+..... ....+||+.|||||++ .+ ....+++++||||||||||+|+||. |
T Consensus 179 ~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL------~g-------e~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 179 PIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELL------LH-------ETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred CceEEccCCcccccccccc---ccccCCCccccCHHHH------hc-------cCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 357888 56666543322 3467899999999998 32 1234778999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+. ..+...+..........+.+++.+||..+|.+||++.++..
T Consensus 243 F~~~~~~~qli---------------------~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 243 FHKANNFSQLI---------------------SELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcCCcHHHHH---------------------HHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9753221 000 00000000011112234888999999999999999887764
No 284
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.29 E-value=2.8e-12 Score=121.93 Aligned_cols=122 Identities=12% Similarity=0.182 Sum_probs=82.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++...+.......+...|++.|||||++ .+ +.+++++|||||||++|||++ |.
T Consensus 146 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~------~~---------~~~~~~~Dv~slG~il~el~t~g~~ 210 (279)
T cd05111 146 SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI------LF---------GRYTHQSDVWSYGVTVWEMMSYGAE 210 (279)
T ss_pred CcEEEcCCccceeccCCCcccccCCCCCcccccCHHHh------cc---------CCcCchhhHHHHHHHHHHHHcCCCC
Confidence 457887 667766554443334457788999999998 33 567899999999999999998 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.+..+..+..+..+.. .+. ........+.+++.+|+..+|.+||+..++.+.+..+..
T Consensus 211 p~~~~~~~~~~~~~~~~~--------~~~------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 211 PYAGMRPHEVPDLLEKGE--------RLA------------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCCHHHHHHHHHCCC--------cCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 997754431110000000 000 000112246678899999999999999999888777654
Q ss_pred C
Q 009274 168 K 168 (538)
Q Consensus 168 ~ 168 (538)
.
T Consensus 271 ~ 271 (279)
T cd05111 271 D 271 (279)
T ss_pred C
Confidence 3
No 285
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.29 E-value=1.6e-12 Score=126.89 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=69.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+... ..+.+||+.|||||++ .+ ..++.++|||||||+||+|++|.
T Consensus 167 ~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~ell~G~~ 226 (340)
T PTZ00426 167 DGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEIL------LN---------VGHGKAADWWTLGIFIYEILVGCP 226 (340)
T ss_pred CCCEEEecCCCCeecCCC-----cceecCChhhcCHHHH------hC---------CCCCccccccchhhHHHHHhcCCC
Confidence 3567887 666665433 2357899999999999 33 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||...++..+...... . ....+. .....+.+++.+||..+|.+|+.
T Consensus 227 Pf~~~~~~~~~~~i~~-~-----~~~~p~---------------~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 227 PFYANEPLLIYQKILE-G-----IIYFPK---------------FLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred CCCCCCHHHHHHHHhc-C-----CCCCCC---------------CCCHHHHHHHHHHcccCHHHcCC
Confidence 9987654421100000 0 000000 01123678999999999999975
No 286
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.29 E-value=1.3e-12 Score=126.76 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=71.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++........ ...++||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 135 ~~~kL~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~tg~~p 197 (318)
T cd05582 135 GHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV------NR---------RGHTQSADWWSFGVLMFEMLTGSLP 197 (318)
T ss_pred CcEEEeeccCCcccCCCCCc--eecccCChhhcCHHHH------cC---------CCCCCccceeccceEeeeeccCCCC
Confidence 457887 556555433221 3468899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.......+.....+. ... .+ ......+.+++.+||..+|.+||++.+
T Consensus 198 ~~~~~~~~~~~~i~~~------~~~--------~p-------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 198 FQGKDRKETMTMILKA------KLG--------MP-------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHcC------CCC--------CC-------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 9875433111000000 000 00 011123678999999999999999765
No 287
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.29 E-value=1.4e-12 Score=126.69 Aligned_cols=115 Identities=24% Similarity=0.254 Sum_probs=81.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.=|++ |+|...++... +++++|||.|||||++ .+ ..|+..+|+||+||++|.||+|.
T Consensus 175 ~~~ik~~DFGla~~~~~~~~---~~~~~Gtp~y~APEvl------~~---------~~y~~~~DiWS~Gvi~yiLL~G~~ 236 (382)
T KOG0032|consen 175 SGRIKLIDFGLAKFIKPGER---LHTIVGTPEYVAPEVL------GG---------RPYGDEVDVWSIGVILYILLSGVP 236 (382)
T ss_pred CCcEEEeeCCCceEccCCce---EeeecCCccccCchhh------cC---------CCCCcccchhHHHHHHHHHhhCCC
Confidence 3456677 88988887332 8899999999999999 33 67889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+...+.... ....+ ......+........+.+.++|.++|..|+++.++.+
T Consensus 237 PF~~~~~~~~~~~i---------~~~~~--------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 237 PFWGETEFEIFLAI---------LRGDF--------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCcCCChhHHHHHH---------HcCCC--------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 99997655222000 00000 1111111112223778999999999999999877665
No 288
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.29 E-value=2.3e-12 Score=122.62 Aligned_cols=116 Identities=15% Similarity=0.223 Sum_probs=74.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+.............+++.|||||++ .+ ..+++++|||||||++|+|++ |.
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~e~~~~g~~ 223 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESI------MY---------RKFTTESDVWSFGVVLWEIFTYGKQ 223 (280)
T ss_pred CeEEECCcccceecccCcceecCCCCcccceecChhhh------cc---------CCcchhhhHHHHHHHHHHHHhcCCC
Confidence 456777 455544322211112345678999999998 43 567899999999999999999 99
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||......... .+. . + . ...........+.+++.+||..+|++||+..++.+.+.
T Consensus 224 p~~~~~~~~~~~~~~---~--------------~-~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 224 PWYGLSNEEVIECIT---Q--------------G-R---LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCCCHHHHHHHHH---c--------------C-C---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 98764333111 000 0 0 0 00000112234788999999999999999988877553
No 289
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.28 E-value=2.1e-12 Score=125.64 Aligned_cols=108 Identities=12% Similarity=0.059 Sum_probs=71.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++........ ....+||+.|||||++ .+ ..++.++|||||||+||+|++|. |
T Consensus 133 ~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 133 GHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVI------RK---------QPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CCEEEeecCCcccCCCCCCC--cccccCChhhCCHHHH------cC---------CCCCCcCccccccceehhhhcCCCC
Confidence 457787 555543222211 3468899999999999 43 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.......+. .. .........+.....+.+++.+||..+|.+||....
T Consensus 196 f~~~~~~~~~-----------------~~----~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 196 FYCRDVAEMY-----------------DN----ILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCCCCHHHHH-----------------HH----HHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 9875443111 00 000000001112234678999999999999998754
No 290
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.28 E-value=4.8e-09 Score=95.36 Aligned_cols=185 Identities=17% Similarity=0.181 Sum_probs=128.4
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec-CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
..+..++|+ -..++++..|-+|++||-.+ ++...++. ....|++++|-|.+..-++.|+. +.|.+|.........
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccc
Confidence 345667787 45678888999999999766 55555553 45689999999988888777776 668999876433222
Q ss_pred ce---------eeecccCCceeeeEEEEeecCCEEEEeeC-CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 009274 330 PL---------KKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 330 ~~---------~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
.. ... .+.+......+.+.+||..+++++. |..|.|||..++..+.-.....+.++-+.|+ ++++++
T Consensus 177 r~~~~~s~~~~qvl-~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVL-QDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred cccccccccchhhe-eCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEE
Confidence 11 111 1122234445677788888888875 6789999999988766554456778899999 559999
Q ss_pred EecCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEe
Q 009274 398 GSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 398 ~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
+.-|+..++|+... ....+-... .+.+.. .+|+|+|++|+...
T Consensus 256 At~davfrlw~e~q~wt~erw~lg--sgrvqt-acWspcGsfLLf~~ 299 (445)
T KOG2139|consen 256 ATCDAVFRLWQENQSWTKERWILG--SGRVQT-ACWSPCGSFLLFAC 299 (445)
T ss_pred ecccceeeeehhcccceecceecc--CCceee-eeecCCCCEEEEEE
Confidence 99999999995543 333322222 234444 58999998766544
No 291
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.28 E-value=4.9e-12 Score=122.68 Aligned_cols=68 Identities=22% Similarity=0.331 Sum_probs=50.4
Q ss_pred eeeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
++..|+. |+|+..+....+. ......||+.|||||++ .| ...++.++|||||||++|+|++|+
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~ 213 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGCIFAELLTSE 213 (317)
T ss_pred cCcEEEeecCceeccCCCCccccccCCccccccccCCHHH------cC--------CCCcCchhhHHHHHHHHHHHHhCC
Confidence 4568888 6677655432211 13458999999999998 33 134678999999999999999999
Q ss_pred -ccchh
Q 009274 88 -QFTKE 92 (538)
Q Consensus 88 -pf~~~ 92 (538)
||...
T Consensus 214 ~~f~~~ 219 (317)
T cd07868 214 PIFHCR 219 (317)
T ss_pred CCccCC
Confidence 99753
No 292
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.28 E-value=2.1e-12 Score=125.30 Aligned_cols=107 Identities=14% Similarity=0.189 Sum_probs=70.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|+
T Consensus 132 ~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~el~tg~~ 194 (321)
T cd05591 132 EGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEIL------QE---------LEYGPSVDWWALGVLMYEMMAGQP 194 (321)
T ss_pred CCCEEEeecccceecccCCc--cccccccCccccCHHHH------cC---------CCCCCccceechhHHHHHHhcCCC
Confidence 4567888 44444322221 24568899999999998 33 46788999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||.......+. .+. . . ....+ ......+.+++.+||..+|.+|+...
T Consensus 195 Pf~~~~~~~~~~~i~-~-~------~~~~p--------------~~~~~~~~~ll~~~L~~dp~~R~~~~ 242 (321)
T cd05591 195 PFEADNEDDLFESIL-H-D------DVLYP--------------VWLSKEAVSILKAFMTKNPNKRLGCV 242 (321)
T ss_pred CCCCCCHHHHHHHHH-c-C------CCCCC--------------CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 99876444111 000 0 0 00000 00112367899999999999999643
No 293
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.28 E-value=2e-12 Score=125.58 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=68.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... ......||+.|||||++ .+ ..++.++|||||||+||||++|+
T Consensus 136 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~G~~ 198 (323)
T cd05584 136 QGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEIL------MR---------SGHGKAVDWWSLGALMYDMLTGAP 198 (323)
T ss_pred CCCEEEeeCcCCeecccCCC--cccccCCCccccChhhc------cC---------CCCCCcceecccHHHHHHHhcCCC
Confidence 3567888 45554322221 14467899999999998 33 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||........... +.. . .. .........+.+++.+||..+|.+||+
T Consensus 199 pf~~~~~~~~~~~----------~~~------~-~~----~~~~~~~~~~~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 199 PFTAENRKKTIDK----------ILK------G-KL----NLPPYLTPEARDLLKKLLKRNPSSRLG 244 (323)
T ss_pred CCCCCCHHHHHHH----------HHc------C-CC----CCCCCCCHHHHHHHHHHcccCHhHcCC
Confidence 9987543311100 000 0 00 000011223778999999999999995
No 294
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.28 E-value=2.7e-12 Score=124.52 Aligned_cols=77 Identities=26% Similarity=0.378 Sum_probs=54.0
Q ss_pred EEeeccceeeeeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhh
Q 009274 2 ILVMGRRVTKSVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (538)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~ 78 (538)
||+.+..--++..|+. |+++.......+. .....+||+.|||||++ .+ ...++.++|||||||
T Consensus 139 il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~ 204 (317)
T cd07867 139 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGC 204 (317)
T ss_pred EEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHh------cC--------CCccCcHHHHHhHHH
Confidence 3444333234567888 6777665432211 13457899999999998 33 134678999999999
Q ss_pred hhhhhhhcC-ccchh
Q 009274 79 ILLSLLIGE-QFTKE 92 (538)
Q Consensus 79 ~l~~lltg~-pf~~~ 92 (538)
++|||+||+ ||...
T Consensus 205 il~el~tg~~~f~~~ 219 (317)
T cd07867 205 IFAELLTSEPIFHCR 219 (317)
T ss_pred HHHHHHhCCCCcccc
Confidence 999999999 98753
No 295
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.28 E-value=2.8e-12 Score=124.09 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=69.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 133 GHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEIL------LG---------QKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred CCEEEccCCcceECCCCCC--ceeeecCCccccCHHHH------cC---------CCCCchhhhhhHHHHHHHHHhCCCC
Confidence 356777 44443221111 13468899999999999 33 45788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.......+. .......+.. .......+.+++.+||..+|.+|+++.
T Consensus 196 f~~~~~~~~~-----------------~~i~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 196 FHGHDEEELF-----------------QSIRMDNPCY----PRWLTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred CCCCCHHHHH-----------------HHHHhCCCCC----CccCCHHHHHHHHHHhccCHhhcCCCh
Confidence 9875443111 0000000000 001112367899999999999999975
No 296
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.28 E-value=4.3e-12 Score=123.72 Aligned_cols=63 Identities=25% Similarity=0.435 Sum_probs=49.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+.+.. .....||+.|||||++ .+ ..++.++|||||||+||+|+||+ |
T Consensus 141 ~~~kl~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~tg~~p 201 (331)
T cd06649 141 GEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVELAIGRYP 201 (331)
T ss_pred CcEEEccCcccccccccc----cccCCCCcCcCCHhHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCC
Confidence 457887 5555554332 3467899999999999 44 45788999999999999999999 9
Q ss_pred cchhh
Q 009274 89 FTKEL 93 (538)
Q Consensus 89 f~~~~ 93 (538)
|....
T Consensus 202 ~~~~~ 206 (331)
T cd06649 202 IPPPD 206 (331)
T ss_pred CCCCC
Confidence 97643
No 297
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.28 E-value=1.9e-12 Score=126.83 Aligned_cols=131 Identities=16% Similarity=0.239 Sum_probs=75.8
Q ss_pred eeeeeec--cccccccccc-hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 11 KSVAKVG--CVGSRICDKE-VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
++..|+. |+++...... ........+||+.|||||++ .+ ....+++++|||||||++|+|+||+
T Consensus 139 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~-------~~~~~~~~~DvwSlGvvl~el~tg~ 205 (338)
T cd07859 139 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC------GS-------FFSKYTPAIDIWSIGCIFAEVLTGK 205 (338)
T ss_pred CCcEEEccCccccccccccCccccccCCCCCCCcCCHHHH------hc-------cccccCchhHHHHHHHHHHHHHcCC
Confidence 3467888 5555443222 12223467999999999998 22 1245778999999999999999999
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHH---------HHHH-------HHhhhcCccchHHHHHhhhhccCCC
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEK---------VTYL-------LENKFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-------~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
||.+............. ...++...... .... .....+.....+.+++.+||..+|.
T Consensus 206 ~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 279 (338)
T cd07859 206 PLFPGKNVVHQLDLITDL------LGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPK 279 (338)
T ss_pred CCCCCCChHHHHHHHHHH------hCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcc
Confidence 99764332110000000 00000000000 0000 0001112223467899999999999
Q ss_pred CCcchhhHHH
Q 009274 151 CRPLLTNVWK 160 (538)
Q Consensus 151 ~r~~~~~~~~ 160 (538)
+||++.++.+
T Consensus 280 ~Rpt~~e~l~ 289 (338)
T cd07859 280 DRPTAEEALA 289 (338)
T ss_pred cCCCHHHHhc
Confidence 9999887765
No 298
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.27 E-value=2.5e-12 Score=122.34 Aligned_cols=112 Identities=12% Similarity=0.121 Sum_probs=70.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+...... .....||+.|||||++ .+ ..++.++|+|||||++|+|++|+
T Consensus 133 ~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~------~~---------~~~~~~~DvwslG~il~el~~g~~ 195 (280)
T cd05608 133 DGNVRISDLGLAVELKDGQSK--TKGYAGTPGFMAPELL------QG---------EEYDFSVDYFALGVTLYEMIAARG 195 (280)
T ss_pred CCCEEEeeCccceecCCCCcc--ccccCCCcCccCHHHh------cC---------CCCCccccHHHHHHHHHHHHhCCC
Confidence 3457887 455555443321 3457899999999999 44 56778999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||......... . .........+..........+.+++.+||..+|.+|++..
T Consensus 196 pf~~~~~~~~~-------------~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 196 PFRARGEKVEN-------------K----ELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred CCCCCCcchhH-------------H----HHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 99764221000 0 0000000000000001122477899999999999999643
No 299
>PTZ00284 protein kinase; Provisional
Probab=99.27 E-value=1.4e-12 Score=133.29 Aligned_cols=63 Identities=21% Similarity=0.459 Sum_probs=47.6
Q ss_pred eeeeccccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccch
Q 009274 13 VAKVGCVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (538)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~ 91 (538)
..|+..++...... ...+.++||+.|||||++ .| ..++.++|||||||+||||++|+ ||.+
T Consensus 286 ~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~------~~---------~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 286 RVRICDLGGCCDER---HSRTAIVSTRHYRSPEVV------LG---------LGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred eEEECCCCccccCc---cccccccCCccccCcHHh------hc---------CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 36888555222111 114468999999999999 44 56789999999999999999999 9986
Q ss_pred hh
Q 009274 92 EL 93 (538)
Q Consensus 92 ~~ 93 (538)
..
T Consensus 348 ~~ 349 (467)
T PTZ00284 348 HD 349 (467)
T ss_pred CC
Confidence 43
No 300
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.27 E-value=2e-12 Score=126.10 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=70.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++........ ....+||+.|||||++ .+ ...++.++|||||||+||+|+||. |
T Consensus 133 ~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DvwslGvil~elltG~~P 196 (330)
T cd05586 133 GHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVL------LD--------EKGYTKHVDFWSLGVLVFEMCCGWSP 196 (330)
T ss_pred CCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHH------cC--------CCCCCCccceeccccEEEEeccCCCC
Confidence 457888 566554333221 4468899999999998 32 133678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.......+. .+... ....+ . ......+.+++.+||..+|.+||+...
T Consensus 197 f~~~~~~~~~~~i~~~-------~~~~~---~-----------~~~~~~~~~li~~~L~~~P~~R~~~~~ 245 (330)
T cd05586 197 FYAEDTQQMYRNIAFG-------KVRFP---K-----------NVLSDEGRQFVKGLLNRNPQHRLGAHR 245 (330)
T ss_pred CCCCCHHHHHHHHHcC-------CCCCC---C-----------ccCCHHHHHHHHHHcCCCHHHCCCCCC
Confidence 9875443211 00000 00000 0 001123677999999999999997543
No 301
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.27 E-value=4.1e-10 Score=100.85 Aligned_cols=289 Identities=13% Similarity=0.108 Sum_probs=181.1
Q ss_pred eeeccCcceeEEeecCCeEEEEE---eecC-----CCcEEEEEEc--C-CEEEEEeCCCcEEEEeCCCCceEEEEecCCc
Q 009274 225 ARAAGGVKDLVNGLSKGNVKFKD---LQGH-----RDCVTGLAVG--G-GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH 293 (538)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~---l~~h-----~~~V~~l~~~--~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 293 (538)
..+++.++.+++...- .+.+++ ++-| -+.|.-+.|. . -.+.....|+.|.+|++...+-...+.....
T Consensus 14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a 92 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA 92 (447)
T ss_pred eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence 4455666666655443 455554 2222 3567778887 3 3455567789999999988888888888889
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc---EEEEECC
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT---IKAWSLL 370 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~---i~iwd~~ 370 (538)
++.++.|+|++..++.+...|-.|.+|.+.+.+....-.. .......++++||++.+.++.-.. +.+....
T Consensus 93 gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~p------K~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~ 166 (447)
T KOG4497|consen 93 GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHP------KTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK 166 (447)
T ss_pred cceeeeECCCcceEeeeecceeEEEEEEeccceeEEeccc------ccCceeEEECCCCceeeeeecccHHHHHHHHhhH
Confidence 9999999999999999999999999999987543211111 122245689999998888776322 1222122
Q ss_pred CCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEE
Q 009274 371 DGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (538)
Q Consensus 371 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 450 (538)
....+..++..+-..+.+.|+++ +..+.+||---.-.+.... .+.......|+|.++++++|+.|+.+|+
T Consensus 167 ~W~ll~~f~~dT~DltgieWsPd-------g~~laVwd~~Leykv~aYe---~~lG~k~v~wsP~~qflavGsyD~~lrv 236 (447)
T KOG4497|consen 167 AWILLKEFKLDTIDLTGIEWSPD-------GNWLAVWDNVLEYKVYAYE---RGLGLKFVEWSPCNQFLAVGSYDQMLRV 236 (447)
T ss_pred HHHHHHhcCCCcccccCceECCC-------CcEEEEecchhhheeeeee---eccceeEEEeccccceEEeeccchhhhh
Confidence 23345555555666788889832 3345567643222222222 1122233699999999999999999988
Q ss_pred Ee------CCc---------------------cee-----------eeccc-----------------------------
Q 009274 451 WR------NDK---------------------FMK-----------SMQTH----------------------------- 463 (538)
Q Consensus 451 wd------~~~---------------------~~~-----------~~~~h----------------------------- 463 (538)
.+ ..+ ..+ .+..|
T Consensus 237 lnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pn 316 (447)
T KOG4497|consen 237 LNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPN 316 (447)
T ss_pred hceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCC
Confidence 54 010 000 00001
Q ss_pred -cceEEEEEe--CCCEEEEEeCC--CeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEEEECCCeEEEEEc
Q 009274 464 -KGSVFAVFL--EGKWLFTGGWD--KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKVYYY 536 (538)
Q Consensus 464 -~~~v~~~~~--~~~~l~sgs~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~~dg~v~vw~~ 536 (538)
...+--++| |..+++|-.+. +.+-+||+...++........ .+....|+.+ +|+.+.....+++|..
T Consensus 317 Pk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~------piraf~WdP~~prL~vctg~srLY~W~p 390 (447)
T KOG4497|consen 317 PKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKH------PIRAFEWDPGRPRLVVCTGKSRLYFWAP 390 (447)
T ss_pred cccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhcc------ceeEEEeCCCCceEEEEcCCceEEEEcC
Confidence 001222334 67777776543 678999999887655444332 5666667654 4777777777888864
No 302
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.27 E-value=2.7e-12 Score=124.36 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=69.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|+
T Consensus 132 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslGvil~~l~~G~~ 194 (318)
T cd05570 132 EGHIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEIL------SY---------QPYGPAVDWWALGVLLYEMLAGQS 194 (318)
T ss_pred CCcEEecccCCCeecCcCCC--cccceecCccccCHHHh------cC---------CCCCcchhhhhHHHHHHHHhhCCC
Confidence 3457787 45543221111 13467899999999999 44 56788999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.......+. .+. .. . .. . .......+.+++.+||..+|.+||++
T Consensus 195 pf~~~~~~~~~~~i~--~~-------~-~~--------~----~~~~~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 195 PFEGDDEDELFQSIL--ED-------E-VR--------Y----PRWLSKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred CCCCCCHHHHHHHHH--cC-------C-CC--------C----CCcCCHHHHHHHHHHccCCHHHcCCC
Confidence 99865433111 000 00 0 00 0 00111237789999999999999997
No 303
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.26 E-value=2.8e-12 Score=123.56 Aligned_cols=124 Identities=12% Similarity=0.076 Sum_probs=76.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc--C
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG--E 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg--~ 87 (538)
...|+. |+++.+...+.........+++.|||||++ .+ +.+++++|||||||++|+|+++ .
T Consensus 175 ~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 175 LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI------LM---------GKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred ccEEECCCccceecccCceeEecCcCCCCccccCHHHH------hc---------CCCCchhhhHHHHHHHHHHHHccCC
Confidence 467888 666666544322223356778999999998 33 5678999999999999999974 4
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.......+. .......+.................+.+++.+|+..+|.+||+..++.+.+.
T Consensus 240 ~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVI-------------ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHH-------------HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 88764333111 0000000000000000011122234888999999999999999998876543
No 304
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=9.9e-13 Score=124.83 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=77.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++-+|+- |+|+.+....++ -+|||||.|.|||++ ++...+.+.|+||||+++||||||+
T Consensus 556 ~Gy~KLVDFGFAKki~~g~KT---wTFcGTpEYVAPEII---------------LnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 556 RGYLKLVDFGFAKKIGSGRKT---WTFCGTPEYVAPEII---------------LNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred CCceEEeehhhHHHhccCCce---eeecCCcccccchhh---------------hccCcchhhHHHHHHHHHHHHHcCCC
Confidence 4667776 889999888774 479999999999999 3345568999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||.+.++....++.++.-. .+..+.. + .....+++.+....+|..|-.
T Consensus 618 PFs~~dpmktYn~ILkGid----~i~~Pr~----I-----------~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 618 PFSGVDPMKTYNLILKGID----KIEFPRR----I-----------TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred CCCCCchHHHHHHHHhhhh----hhhcccc----c-----------chhHHHHHHHHHhcCcHhhhc
Confidence 9999877754433333221 1211111 1 112556888888899999865
No 305
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.26 E-value=1.7e-12 Score=126.04 Aligned_cols=105 Identities=15% Similarity=0.196 Sum_probs=68.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 132 ~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~ell~g~~P 194 (323)
T cd05595 132 GHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRLP 194 (323)
T ss_pred CCEEecccHHhccccCCCC--ccccccCCcCcCCcccc------cC---------CCCCchhchhhhHHHHHHHHhCCCC
Confidence 467888 44554322221 14468899999999998 43 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.......+.... ...... . .......+.+++.+||..+|.+|+.
T Consensus 195 f~~~~~~~~~~~~---------~~~~~~--------~----p~~~~~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05595 195 FYNQDHERLFELI---------LMEEIR--------F----PRTLSPEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred CCCCCHHHHHHHH---------hcCCCC--------C----CCCCCHHHHHHHHHHccCCHHHhCC
Confidence 9765433111000 000000 0 0011234778999999999999984
No 306
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.26 E-value=3.7e-12 Score=125.97 Aligned_cols=65 Identities=18% Similarity=0.392 Sum_probs=50.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++...... ..+...||+.|||||++ .| ..++.++|||||||+||+|++|+
T Consensus 162 ~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~ 223 (364)
T cd07875 162 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMIKGGV 223 (364)
T ss_pred CCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHH------hC---------CCCCchhhHHhHHHHHHHHHhCCC
Confidence 3457888 5666554321 24567899999999999 44 56778999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||.+..
T Consensus 224 pf~~~~ 229 (364)
T cd07875 224 LFPGTD 229 (364)
T ss_pred CCCCCC
Confidence 998654
No 307
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.26 E-value=3.1e-12 Score=124.55 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=68.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 133 ~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~P 195 (329)
T cd05618 133 GHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred CCEEEeeCCccccccCCCC--ccccccCCccccCHHHH------cC---------CCCCCccceecccHHHHHHhhCCCC
Confidence 457887 55554322111 14468999999999999 44 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|......... ............... ....+ .....+.+++.+||..+|.+|+++
T Consensus 196 f~~~~~~~~~------------~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 196 FDIVGSSDNP------------DQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CccCCCcCCc------------ccccHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 9642111000 000000000000000 00011 122346789999999999999985
No 308
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.26 E-value=2.8e-12 Score=124.68 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=69.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|+||+ |
T Consensus 138 ~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~elltG~~p 200 (324)
T cd05587 138 GHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEII------AY---------QPYGKSVDWWAFGVLLYEMLAGQPP 200 (324)
T ss_pred CCEEEeecCcceecCCCCC--ceeeecCCccccChhhh------cC---------CCCCcccchhhhHHHHHHHHhCCCC
Confidence 457888 44443221211 14468899999999999 43 55778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.+.....+.. ......... .......+.+++.+||..+|.+|++.+
T Consensus 201 f~~~~~~~~~~-----------------~i~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 201 FDGEDEDELFQ-----------------SIMEHNVSY----PKSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred CCCCCHHHHHH-----------------HHHcCCCCC----CCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 98754431110 000000000 001112367899999999999999863
No 309
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.26 E-value=4.5e-12 Score=120.40 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=74.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
.+|+. |+++.+.............+++.|||||++ .+ ..++.++|||||||++|+|++ |+ |
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~~g~~p 221 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF------LD---------GIFTSKTDVWSFGVLLWEIFSLGYMP 221 (277)
T ss_pred ceEeccCccccccCCccceecCCCCCccHhhCCHHHH------hc---------CCcCchhHHHHHHHHHHHHHcCCCCC
Confidence 57888 566665433221112234456789999999 33 567899999999999999997 88 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|.......+........ .. ........++.+++.+|+..+|++||+..++.+.+.
T Consensus 222 f~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 222 YPGRTNQEVMEFVTGGG-----RL---------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCHHHHHHHHHcCC-----cC---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 98754441110000000 00 000111234778999999999999999998876543
No 310
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.26 E-value=4e-12 Score=123.46 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=70.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ......||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 138 ~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~elltG~~p 200 (323)
T cd05615 138 GHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEII------AY---------QPYGKSVDWWAYGVLLYEMLAGQPP 200 (323)
T ss_pred CCEEEeccccccccCCCCc--cccCccCCccccCHHHH------cC---------CCCCCccchhhhHHHHHHHHhCCCC
Confidence 456787 55554432221 24467899999999999 43 55788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|.+.....+.. .+..............+.+++.+||.++|.+|++..
T Consensus 201 f~~~~~~~~~~---------------------~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 201 FDGEDEDELFQ---------------------SIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCCCCHHHHHH---------------------HHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 98764431110 000000000001112367899999999999999854
No 311
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.26 E-value=2.5e-12 Score=129.86 Aligned_cols=131 Identities=15% Similarity=0.201 Sum_probs=76.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+|+.+..... ....+||+.|||||++ .| ...++.++|||||||+||||++|. ||
T Consensus 209 ~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 209 TLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELM------LG--------ATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred ceeeeccccchhccCCCC---cccCCCCcCccCHHHh------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 57888 67776654432 3357899999999998 33 235788999999999999999999 99
Q ss_pred chhhhh-heee-ccccccCcchhhcchhhHHHH-HHHH----HHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELID-YIRC-VSTKASDDNIACLGMYMAWME-KVTY----LLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+.... .+.. ++.......-......+.... ..+. ......+ ....++.+++.+||..+|.+|+++.++..
T Consensus 272 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 272 SGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 875433 1110 000000000000000000000 0000 0000001 12234788999999999999999988765
No 312
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.26 E-value=2.2e-12 Score=126.09 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=74.7
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
-||| |||..+...- -+.+.|||.|||||..+| .|+...||||||+|++||.|+. ||.
T Consensus 185 VKIGDLGLAtl~r~s~----aksvIGTPEFMAPEmYEE----------------~YnE~VDVYaFGMCmLEMvT~eYPYs 244 (632)
T KOG0584|consen 185 VKIGDLGLATLLRKSH----AKSVIGTPEFMAPEMYEE----------------NYNELVDVYAFGMCMLEMVTSEYPYS 244 (632)
T ss_pred eeecchhHHHHhhccc----cceeccCccccChHHHhh----------------hcchhhhhhhhhHHHHHHHhccCChh
Confidence 4899 7776666432 235999999999999843 3567999999999999999999 998
Q ss_pred hh-hhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 91 KE-LIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 91 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.= ++..|. .....+..|..+. ....+++.++|.+||.. ...|+++.++..
T Consensus 245 EC~n~AQIY----------------KKV~SGiKP~sl~---kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 245 ECTNPAQIY----------------KKVTSGIKPAALS---KVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hhCCHHHHH----------------HHHHcCCCHHHhh---ccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 63 222222 0011111222221 23455688999999998 889999887654
No 313
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.25 E-value=3.3e-12 Score=124.71 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=74.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++..... ....+||+.|||||++ .+ ..++.++|||||||+||||++|.
T Consensus 137 ~~~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ell~g~~ 196 (333)
T cd05600 137 SGHIKLTDFGLSKGIVTY-----ANSVVGSPDYMAPEVL------RG---------KGYDFTVDYWSLGCMLYEFLCGFP 196 (333)
T ss_pred CCCEEEEeCcCCcccccc-----cCCcccCccccChhHh------cC---------CCCCCccceecchHHHhhhhhCCC
Confidence 3467888 556555432 4468999999999999 44 46789999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||...+...+. .+..... ....+... . ........+.+++.+||..+|.+||++.++.+
T Consensus 197 pf~~~~~~~~~~~i~~~~~-----~~~~~~~~-~--------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 197 PFSGSTPNETWENLKYWKE-----TLQRPVYD-D--------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CCCCCCHHHHHHHHHhccc-----cccCCCCC-c--------cccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 99875443111 0000000 00000000 0 00011224778999999999999999777655
No 314
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.25 E-value=6.9e-12 Score=119.59 Aligned_cols=109 Identities=17% Similarity=0.246 Sum_probs=68.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 139 ~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Diws~G~~l~el~~g~~p 200 (285)
T cd05605 139 GHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVV------KN---------ERYTFSPDWWGLGCLIYEMIEGKSP 200 (285)
T ss_pred CCEEEeeCCCceecCCCCc---cccccCCCCccCcHHh------cC---------CCCCccccchhHHHHHHHHHHCCCC
Confidence 456777 55555543321 2356899999999998 33 55778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|.+....... ......+...+..........+.+++.+||..+|.+||+.
T Consensus 201 f~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05605 201 FRQRKEKVKR-----------------EEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGC 250 (285)
T ss_pred CCCCchhhHH-----------------HHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCC
Confidence 9864332000 0000000000000001112237789999999999999954
No 315
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.25 E-value=4e-12 Score=120.69 Aligned_cols=114 Identities=11% Similarity=0.119 Sum_probs=71.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |++..+..... .....||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 132 ~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslGv~l~el~~g~~p 193 (277)
T cd05607 132 GNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEIL------KE---------EPYSYPVDWFAMGCSIYEMVAGRTP 193 (277)
T ss_pred CCEEEeeceeeeecCCCce---eeccCCCCCccCHHHH------cc---------CCCCCchhHHHHHHHHHHHHhCCCC
Confidence 456777 55555543321 3357899999999998 33 45789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
|........ .... ...................+.+++.+||..+|.+||++.++.
T Consensus 194 ~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 194 FKDHKEKVA-------------KEEL---KRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred CCCCcchhh-------------HHHH---HHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence 975322100 0000 000000000000011122478899999999999999987654
No 316
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.25 E-value=3.9e-12 Score=123.79 Aligned_cols=113 Identities=16% Similarity=0.143 Sum_probs=69.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.. +++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 133 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~ell~g~~p 195 (327)
T cd05617 133 GHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEIL------RG---------EEYGFSVDWWALGVLMFEMMAGRSP 195 (327)
T ss_pred CCEEEeccccceeccCCCC--ceecccCCcccCCHHHH------CC---------CCCCchheeehhHHHHHHHHhCCCC
Confidence 4578884 4443221111 14468999999999999 44 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|......... .............+. ..+. ....+.+++.+||..+|.+|++..
T Consensus 196 f~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 196 FDIITDNPDM--------------NTEDYLFQVILEKPI-RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCccCCCccc--------------ccHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 9653211000 000000010110000 0111 122477899999999999999853
No 317
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.25 E-value=3.1e-12 Score=122.26 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=48.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .+...||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 145 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslG~~l~~l~~g~~~ 206 (288)
T cd07863 145 GQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVL------LQ---------STYATPVDMWSVGCIFAEMFRRKPL 206 (288)
T ss_pred CCEEECccCccccccCccc---CCCccccccccCchHh------hC---------CCCCCcchhhhHHHHHHHHHhCCcC
Confidence 456777 55665543321 3467899999999998 33 55788999999999999999999 8
Q ss_pred cchh
Q 009274 89 FTKE 92 (538)
Q Consensus 89 f~~~ 92 (538)
|.+.
T Consensus 207 f~~~ 210 (288)
T cd07863 207 FCGN 210 (288)
T ss_pred cCCC
Confidence 8664
No 318
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.25 E-value=9.7e-12 Score=119.08 Aligned_cols=122 Identities=7% Similarity=-0.066 Sum_probs=76.5
Q ss_pred eeeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhh
Q 009274 12 SVAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLL 84 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~ll 84 (538)
+.+|+. |+|+......... ......||+.|||||+. .| ..++.++|||||||+||||+
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~------~~---------~~~~~~~DiwSlG~~l~el~ 227 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAH------NG---------ACVTRRGDLESLGYCMLKWA 227 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHh------CC---------CCCCcHHHHHHHHHHHHHHH
Confidence 456777 7777664322110 01235799999999998 44 56789999999999999999
Q ss_pred hcC-ccchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 85 IGE-QFTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 85 tg~-pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
+|. ||...... .+. ..........+.. ...........+.+++..|+..+|++||...++.+.+
T Consensus 228 ~g~~P~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 228 GIKLPWKGFGHNGNLI-------------HAAKCDFIKRLHE-GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hCCCCCCccccchHHH-------------HHhHHHHHHHhhh-hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 999 99865222 100 0000000000000 0001122234578899999999999999988877643
No 319
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.25 E-value=9.7e-12 Score=123.23 Aligned_cols=120 Identities=15% Similarity=0.188 Sum_probs=76.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++...............+++.|||||++ .+ ..++.++|||||||+||+|++ |.
T Consensus 250 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDi~slG~~l~ellt~g~ 314 (375)
T cd05104 250 GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI------FN---------CVYTFESDVWSYGILLWEIFSLGS 314 (375)
T ss_pred CCcEEEecCccceeccCcccccccCCCCCCcceeChhHh------cC---------CCCCCCCCHHHHHHHHHHHHhcCC
Confidence 3468888 566665443322112235567889999998 43 567899999999999999998 77
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||......... . ....... ...........+.+++.+||..+|.+||+..++.+.+.+
T Consensus 315 ~p~~~~~~~~~~-------------~---~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 315 SPYPGMPVDSKF-------------Y---KMIKEGY---RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCCCchHHH-------------H---HHHHhCc---cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 98764222000 0 0000000 000000112347889999999999999999999887664
No 320
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.25 E-value=2.2e-12 Score=123.18 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=74.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ......||+.|||||++ .+ ...++.++|||||||++|+|+||+ |
T Consensus 140 ~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~~l~~g~~p 203 (288)
T cd07871 140 GELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVL------LG--------STEYSTPIDMWGVGCILYEMATGRPM 203 (288)
T ss_pred CCEEECcCcceeeccCCCc--cccCceecccccChHHh------cC--------CcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 457888 55554433222 14567899999999998 33 245678999999999999999999 9
Q ss_pred cchhhhhheee--ccccccCcchhhcchhhHHHHHH----HH----HHHhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 89 FTKELIDYIRC--VSTKASDDNIACLGMYMAWMEKV----TY----LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 89 f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|.+.+...... ......... ..+.......+.. +. ......+....+..+++.++|..+|.+||++.++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~ 282 (288)
T cd07871 204 FPGSTVKEELHLIFRLLGTPTE-ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAA 282 (288)
T ss_pred CCCCCHHHHHHHHHHHhCCCCh-HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 98754431110 000000000 0000000000000 00 0000011222347789999999999999998876
Q ss_pred HH
Q 009274 159 WK 160 (538)
Q Consensus 159 ~~ 160 (538)
.+
T Consensus 283 l~ 284 (288)
T cd07871 283 LR 284 (288)
T ss_pred hc
Confidence 54
No 321
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.24 E-value=5.9e-12 Score=124.32 Aligned_cols=65 Identities=22% Similarity=0.469 Sum_probs=50.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++...... ..+...||+.|||||++ .| ..++.++|||||||++|+|++|+
T Consensus 159 ~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~el~tg~~ 220 (359)
T cd07876 159 DCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGELVKGSV 220 (359)
T ss_pred CCCEEEecCCCccccccCc---cCCCCcccCCCCCchhc------cC---------CCCCcchhhHHHHHHHHHHHhCCC
Confidence 4567888 5555543322 24467899999999998 44 56788999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||.+.+
T Consensus 221 pf~~~~ 226 (359)
T cd07876 221 IFQGTD 226 (359)
T ss_pred CCCCCC
Confidence 998653
No 322
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.24 E-value=3.8e-09 Score=95.44 Aligned_cols=221 Identities=16% Similarity=0.198 Sum_probs=144.9
Q ss_pred eeeeccCcceeEEeecCCeEEEEEee-----------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC----CCceEE
Q 009274 224 QARAAGGVKDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK----DFSHVH 286 (538)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~l~-----------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~----~~~~~~ 286 (538)
.+...+....+++.+.+..+++|.-. .-..+++++.+. ...|+.|-..|++.-+.+. ....++
T Consensus 29 ~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r 108 (404)
T KOG1409|consen 29 AAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLK 108 (404)
T ss_pred hheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhh
Confidence 33344555566677777777777522 234678888888 6778888889999888653 345566
Q ss_pred EEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 287 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
.+..|...|..+.|+-. ...+++.+.|..+.---.+.+............ .+...|-.+.+.|...|.|..
T Consensus 109 ~~~~h~~~v~~~if~~~-~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~--------t~~~~d~~~~fvGd~~gqvt~ 179 (404)
T KOG1409|consen 109 DYLAHQARVSAIVFSLT-HEWVLSTGKDKQFAWHCTESGNRLGGYNFETPA--------SALQFDALYAFVGDHSGQITM 179 (404)
T ss_pred hhhhhhcceeeEEecCC-ceeEEEeccccceEEEeeccCCcccceEeeccC--------CCCceeeEEEEecccccceEE
Confidence 67789999999999763 446678887776643333333222111111100 011111115566666666665
Q ss_pred EEC--CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 367 WSL--LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 367 wd~--~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
..+ ..-.++.++.+|.+.+++++|. +..+++|..|..+.+||+...+-.......+...+.. ++.-+--+.++++
T Consensus 180 lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~-l~~~~~t~~l~S~ 258 (404)
T KOG1409|consen 180 LKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQA-LSYAQHTRQLISC 258 (404)
T ss_pred EEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhh-hhhhhhheeeeec
Confidence 544 4456788999999999999999 6699999999999999997655433322222333332 3555556789999
Q ss_pred eCCCcEEEEeCC
Q 009274 443 HESGSIKVWRND 454 (538)
Q Consensus 443 ~~dg~i~iwd~~ 454 (538)
+.||.|.+||.+
T Consensus 259 ~edg~i~~w~mn 270 (404)
T KOG1409|consen 259 GEDGGIVVWNMN 270 (404)
T ss_pred cCCCeEEEEecc
Confidence 999999999854
No 323
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=4.9e-11 Score=113.60 Aligned_cols=282 Identities=15% Similarity=0.250 Sum_probs=177.5
Q ss_pred eEEEEEeecCCCcEEEEEE-c-CCEEEEEeCCCcEEEEeCC-------CCceEEEEecCCcCeEEEEEecCCCCEEEEEc
Q 009274 242 NVKFKDLQGHRDCVTGLAV-G-GGFLFSSSFDKSIHVWSLK-------DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~-~-~~~l~s~s~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 312 (538)
.+++.++.||...|..++- + .+-+++++.|.+|++|.+. +..+..+++.|+.+|.++.|..+.. . .++
T Consensus 725 ~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr-~--i~S 801 (1034)
T KOG4190|consen 725 HIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR-S--IAS 801 (1034)
T ss_pred eeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc-e--eee
Confidence 3566678899999999865 4 8889999999999999985 3346788899999999999987443 3 345
Q ss_pred CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEE-eeCCCcEEEEECCCCceeEEec-----CCCCCe
Q 009274 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYT-GSGDRTIKAWSLLDGTLSCTMS-----GHKSAV 385 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~-----~h~~~v 385 (538)
.||.|++||.--+.....+.. ..+......+.++.. +...+.. ++...+|+++|.+.++...+++ +....+
T Consensus 802 cD~giHlWDPFigr~Laq~~d--apk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~ 879 (1034)
T KOG4190|consen 802 CDGGIHLWDPFIGRLLAQMED--APKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALT 879 (1034)
T ss_pred ccCcceeecccccchhHhhhc--CcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhe
Confidence 689999999654332221111 111112233445444 3444444 4778999999999887666553 345668
Q ss_pred EEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEE-EeCCcceeee--
Q 009274 386 STLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV-WRNDKFMKSM-- 460 (538)
Q Consensus 386 ~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~-- 460 (538)
.+++.. ++.++.+-.+|.|.+.|.++|+.+..++.-.-.... --.|..+.++....|.++.+ |..-..+..+
T Consensus 880 R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllq---laapsdq~L~~saldHslaVnWhaldgimh~q~ 956 (1034)
T KOG4190|consen 880 RAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQ---LAAPSDQALAQSALDHSLAVNWHALDGIMHLQD 956 (1034)
T ss_pred eEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhh---hcCchhHHHHhhcccceeEeeehhcCCeeeecc
Confidence 888887 779999999999999999999988776543211111 12355567777777888888 8633222222
Q ss_pred ccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCee----EeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEE
Q 009274 461 QTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEF----EEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKV 533 (538)
Q Consensus 461 ~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~v 533 (538)
+....+..-+..-|..|+++.....+.+|.-..... ....... .+ .+........| +-.+++|...|.|.+
T Consensus 957 kpppepahflqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d-~f-~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 957 KPPPEPAHFLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPD-EF-PGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred CCCCcchhhhhccCceeEEeccCcEEEEEecchhhhhhhhhcccccc-cc-CCccceeeeccccchhhccCCCCceee
Confidence 222222222222566788888888888885322110 0111111 11 11222233334 444778888888875
No 324
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.24 E-value=4e-12 Score=120.19 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=74.3
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
..|+. |+++.+...+.........+++.|||||++ .+ +.++.++|||||||++|+|+| |. |
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESL------LD---------GKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ceEECCcccccccccccccccCcccCCCccccCHHHH------cc---------CCcccchhHHHHHHHHHHHHHcCCCC
Confidence 57787 555655443322222345678999999998 33 567899999999999999998 88 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|.......+. .+.. ...+... . .....+.+++.+||..+|.+||+..++.+.+.
T Consensus 214 ~~~~~~~~~~~~~~~---------~~~~~~~-~-----------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 214 YPALNNQEVLQHVTA---------GGRLQKP-E-----------NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CcccCHHHHHHHHhc---------CCccCCc-c-----------cchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9764332111 0000 0000000 0 01123678999999999999999998877553
No 325
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.24 E-value=7.8e-12 Score=124.76 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=50.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||||++|+ |
T Consensus 222 ~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslGvil~el~~g~~p 286 (392)
T PHA03207 222 ENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELL------AL---------DPYCAKTDIWSAGLVLFEMSVKNVT 286 (392)
T ss_pred CCEEEccCccccccCcccccccccccccccCccCHhHh------cC---------CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 457787 566666554333223457899999999999 43 56778999999999999999999 9
Q ss_pred cchh
Q 009274 89 FTKE 92 (538)
Q Consensus 89 f~~~ 92 (538)
|.+.
T Consensus 287 f~~~ 290 (392)
T PHA03207 287 LFGK 290 (392)
T ss_pred CCCC
Confidence 9764
No 326
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.7e-12 Score=116.57 Aligned_cols=67 Identities=22% Similarity=0.362 Sum_probs=49.8
Q ss_pred eeeccccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchh
Q 009274 14 AKVGCVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKE 92 (538)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~ 92 (538)
-||..++.--+.+.-+..++++||||.|+|||++ .. -.|+.+.|-|.+||++|||++|+ ||...
T Consensus 307 IKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVl------eD---------nDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 307 IKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred eEeeecccchhcccccceeccccCChhhcCchhh------cc---------ccccceeehhhhhHHHHHHHhccCccccc
Confidence 4666443222233333348899999999999999 22 45778999999999999999999 99875
Q ss_pred hhh
Q 009274 93 LID 95 (538)
Q Consensus 93 ~~~ 95 (538)
...
T Consensus 372 dh~ 374 (516)
T KOG0690|consen 372 DHE 374 (516)
T ss_pred chh
Confidence 444
No 327
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.23 E-value=8.2e-12 Score=117.62 Aligned_cols=118 Identities=13% Similarity=0.183 Sum_probs=75.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.......+ ......+++.|+|||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 141 ~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~t~g~~ 204 (263)
T cd05052 141 HLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESL------AY---------NKFSIKSDVWAFGVLLWEIATYGMS 204 (263)
T ss_pred CcEEeCCCccccccccceee-ccCCCCCccccCCHHHh------cc---------CCCCchhHHHHHHHHHHHHHcCCCC
Confidence 457788 455555443221 11224457789999998 43 557789999999999999998 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... .. ... .............+.+++.+||..+|++||+..++.+.++.+
T Consensus 205 p~~~~~~~~~~--------------~~---~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 205 PYPGIDLSQVY--------------EL---LEK---GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHH--------------HH---HHC---CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 99765433111 00 000 000000111223488899999999999999999988876654
No 328
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.23 E-value=7e-12 Score=117.56 Aligned_cols=112 Identities=21% Similarity=0.299 Sum_probs=74.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... ......|++.|+|||++ .+ ..++.++|+|||||++|+|++|+ |
T Consensus 138 ~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 200 (256)
T cd08529 138 DNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELC------ED---------KPYNEKSDVWALGVVLYECCTGKHP 200 (256)
T ss_pred CCEEEcccccceeccCccc--hhhccccCccccCHHHh------cC---------CCCCCccchHHHHHHHHHHHhCCCC
Confidence 457887 44555543322 24457899999999998 33 55778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+.... .......... ....++.+++.+|+..+|++||++.++.+
T Consensus 201 ~~~~~~~~~~~~~---------~~~~~~~~~~-----------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 201 FDANNQGALILKI---------IRGVFPPVSQ-----------MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCCCHHHHHHHH---------HcCCCCCCcc-----------ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 9865433111000 0000000000 11124788999999999999999887764
No 329
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.23 E-value=6.1e-12 Score=119.66 Aligned_cols=115 Identities=13% Similarity=0.190 Sum_probs=73.7
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+.+ +++...............+++.|+|||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 223 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI------LY---------RKFTTESDIWSFGVVLWEIFTYGKQ 223 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHh------cc---------CCcCchhhHHHHHHHHHHHHcCCCC
Confidence 4578884 45544333221112345568899999998 33 557889999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||......... ... + .. ...........+.+++.+||..+|.+||+..++...+
T Consensus 224 p~~~~~~~~~~~~~~-~--------~~------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 224 PWYQLSNTEAIECIT-Q--------GR------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred CCccCCHHHHHHHHH-c--------Cc------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 98654333111 000 0 00 0000011223478899999999999999999887654
No 330
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.23 E-value=3.5e-12 Score=125.59 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=72.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... ....+||+.|||||++...... ....+.++|||||||+||||++|+ |
T Consensus 205 ~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~----------~~~~~~~~DvwslGvil~el~~g~~p 272 (353)
T PLN00034 205 KNVKIADFGVSRILAQTMDP--CNSSVGTIAYMSPERINTDLNH----------GAYDGYAGDIWSLGVSILEFYLGRFP 272 (353)
T ss_pred CCEEEcccccceeccccccc--ccccccCccccCcccccccccc----------CcCCCcchhHHHHHHHHHHHHhCCCC
Confidence 457887 566665433221 3457899999999987221111 123456899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHH-HHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....... +. ........ ............+.+++.+||..+|.+||++.++.+
T Consensus 273 f~~~~~~~---------------~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 273 FGVGRQGD---------------WA---SLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred CCCCCCcc---------------HH---HHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 97432110 00 00000000 000000112234788999999999999999887765
No 331
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=2.9e-12 Score=121.89 Aligned_cols=110 Identities=21% Similarity=0.243 Sum_probs=78.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeecccccccc-ccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVG-YGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~-~~sDi~slG~~l~~lltg~- 87 (538)
+|-|+- |++....+.++ +++.||+.+|-|||++ .| ..|+ |+.||||||||||-|.+|+
T Consensus 156 GlVKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEIL------LG---------DsYDAPAVDiWSLGVILyMLVCGq~ 217 (864)
T KOG4717|consen 156 GLVKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEIL------LG---------DSYDAPAVDIWSLGVILYMLVCGQP 217 (864)
T ss_pred CceEeeeccccccCCCcch---hhcccchhhccCchhh------hc---------CccCCcchhhhHHHHHHHHHHhCCC
Confidence 566776 88999998877 8899999999999999 44 3333 6799999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||...+....+ .+...-.--+|..... ++.++|..+|..+|.+|-+.++|..
T Consensus 218 PFqeANDSETL--------------TmImDCKYtvPshvS~-------eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 218 PFQEANDSETL--------------TMIMDCKYTVPSHVSK-------ECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccccccchhhh--------------hhhhcccccCchhhhH-------HHHHHHHHHHhcCchhhccHHHHhc
Confidence 99864333111 0100000012222211 3778999999999999998877654
No 332
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.23 E-value=8.5e-12 Score=118.89 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=76.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.............++..|||||++ .+ ..++.++|+|||||+||||++ |.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~~~g~~ 225 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAI------MY---------GKFSSDSDIWSFGVVLWEIFSFGLQ 225 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHh------cc---------CCCCchhhhHHHHHHHHHHHcCCCC
Confidence 346887 566655433322223457788999999998 33 567899999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.+.....+.... ....... ........+.+++.+|+..+|.+||+..++.+.+.
T Consensus 226 p~~~~~~~~~~~~~---------~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 226 PYYGFSNQEVIEMV---------RKRQLLP-----------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred CCCCCCHHHHHHHH---------HcCCcCC-----------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 99764333111000 0000000 00011224778999999999999999988877654
No 333
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.23 E-value=8.6e-12 Score=117.35 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=75.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+.+.... ......++..|||||++ .+ ..+++++|||||||++|+|+| |.
T Consensus 140 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~t~g~~ 203 (261)
T cd05072 140 LMCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAI------NF---------GSFTIKSDVWSFGILLYEIVTYGKI 203 (261)
T ss_pred CcEEECCCccceecCCCcee-ccCCCccceecCCHHHh------cc---------CCCChhhhhhhhHHHHHHHHccCCC
Confidence 346777 556665543221 12345678899999998 33 567789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+. . ... ..........+.+++.+|+..+|++||+..++.+.++.
T Consensus 204 p~~~~~~~~~~~~~~---~-----~~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 204 PYPGMSNSDVMSALQ---R-----GYR-------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCHHHHHHHHH---c-----CCC-------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 99765433111 000 0 000 00001112247789999999999999999988876654
No 334
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.23 E-value=1.1e-08 Score=101.98 Aligned_cols=265 Identities=12% Similarity=0.055 Sum_probs=167.0
Q ss_pred EEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----------Ce-EEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 259 AVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----------KV-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 259 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----------~v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
.+.++.+++++.+|.+.-+|.++|+.+...+.... .+ ..+.. .+..++.++.+|.+.-+|.++++.
T Consensus 66 vv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~v~v~~~~g~l~ald~~tG~~ 142 (394)
T PRK11138 66 AVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV---AGGKVYIGSEKGQVYALNAEDGEV 142 (394)
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE---ECCEEEEEcCCCEEEEEECCCCCC
Confidence 34578888888899999999999999887653321 00 01122 123456778899999999988876
Q ss_pred CcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCC-----eEEEEEeCCEEEEEecCC
Q 009274 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSA-----VSTLAVCNGVLYSGSRDG 402 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~l~s~s~dg 402 (538)
.......... .. .....+..++.++.++.++.+|..+|+.++........ ..+....++.++.++.++
T Consensus 143 ~W~~~~~~~~---~s----sP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g 215 (394)
T PRK11138 143 AWQTKVAGEA---LS----RPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNG 215 (394)
T ss_pred cccccCCCce---ec----CCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCC
Confidence 5544332110 00 11112556777888999999999999999887543111 112223366788888999
Q ss_pred cEEEEECCCCceeEEEecCCCCceE-----EEEEEcC--CCCEEEEEeCCCcEEEEeCCcceeeeccccceEEEEEeCCC
Q 009274 403 TIRLWSLSDHSLLTVLEEDSSGAVS-----SVLSLTA--VQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGK 475 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~~~~ 475 (538)
.+..+|..+|+.+............ .....+| .+..++.++.+|.+..+|..+-...++...+....+...+.
T Consensus 216 ~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 295 (394)
T PRK11138 216 RVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSVNDFAVDGG 295 (394)
T ss_pred EEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCccCcEEECC
Confidence 9999999999887665422110000 0001111 25567778889999999965432222222222223344778
Q ss_pred EEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 476 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.++.++.+|.+..+|..+++.......... .........++.++.++.||.|...|..
T Consensus 296 ~vy~~~~~g~l~ald~~tG~~~W~~~~~~~----~~~~sp~v~~g~l~v~~~~G~l~~ld~~ 353 (394)
T PRK11138 296 RIYLVDQNDRVYALDTRGGVELWSQSDLLH----RLLTAPVLYNGYLVVGDSEGYLHWINRE 353 (394)
T ss_pred EEEEEcCCCeEEEEECCCCcEEEcccccCC----CcccCCEEECCEEEEEeCCCEEEEEECC
Confidence 888889999999999999887654332111 1112222347889999999999887754
No 335
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=3.9e-09 Score=106.05 Aligned_cols=213 Identities=12% Similarity=0.095 Sum_probs=135.3
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeC---CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC--cEEEE
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSF---DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIFVW 320 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~vw 320 (538)
+..+...+.+.+|+ |+.|+..+. +..|.+||+.+++... +....+.+....|+|++..++++.+.+| .|++|
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~ 272 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 272 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEE
Confidence 44466788999999 788876543 4579999998876433 2223344557899998887877766666 48888
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC-C--cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD-R--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVL 395 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l 395 (538)
|+.++.... ..... .......++|||+.|+..+.+ + .|+.+|+.+++.. .+..+.....+..|+ ++++
T Consensus 273 d~~tg~~~~----lt~~~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~I 345 (429)
T PRK03629 273 DLASGQIRQ----VTDGR--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFM 345 (429)
T ss_pred ECCCCCEEE----ccCCC--CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEE
Confidence 987653221 11111 112245889999988776654 4 4555577666543 333344455677888 4466
Q ss_pred EEEecC---CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc---EEEEeC-CcceeeeccccceEE
Q 009274 396 YSGSRD---GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS---IKVWRN-DKFMKSMQTHKGSVF 468 (538)
Q Consensus 396 ~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~---i~iwd~-~~~~~~~~~h~~~v~ 468 (538)
+..+.+ ..|.+||+.+++.. .+..... . ....|+|||++|+.++.++. +.+++. +.....+..|.+.+.
T Consensus 346 a~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~--~-~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~ 421 (429)
T PRK03629 346 VMVSSNGGQQHIAKQDLATGGVQ-VLTDTFL--D-ETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 421 (429)
T ss_pred EEEEccCCCceEEEEECCCCCeE-EeCCCCC--C-CCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcC
Confidence 665443 35889999888643 3332211 1 12579999999999888765 566674 445666777777666
Q ss_pred EEEe
Q 009274 469 AVFL 472 (538)
Q Consensus 469 ~~~~ 472 (538)
..+|
T Consensus 422 ~p~W 425 (429)
T PRK03629 422 FPAW 425 (429)
T ss_pred Cccc
Confidence 5544
No 336
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.23 E-value=4e-12 Score=126.37 Aligned_cols=121 Identities=16% Similarity=0.210 Sum_probs=78.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++...............|++.|||||++ .+ ..+++++|||||||+||+|++ |.
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~ellt~g~~ 338 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI------FD---------NLYTTLSDVWSYGILLWEIFSLGGT 338 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhh------cC---------CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 457887 566655433221112346788999999998 33 567889999999999999997 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.............+.. ..+ .........+.+++.+||..+|++||+..++.+.+.++.
T Consensus 339 P~~~~~~~~~~~~~~~~~-------~~~------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 339 PYPGMIVDSTFYNKIKSG-------YRM------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCcccchhHHHHHHHhcC-------CCC------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 997643220000000000 000 000111224778999999999999999999988887764
No 337
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.23 E-value=9.1e-12 Score=118.49 Aligned_cols=119 Identities=14% Similarity=0.187 Sum_probs=80.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.+.+.........|+..|||||++ .+ ..++.++|||||||++|++++ |+
T Consensus 154 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~~ 218 (280)
T cd05043 154 LQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESL------VN---------KEYSSASDVWSFGVLLWELMTLGQT 218 (280)
T ss_pred CcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHH------hc---------CCCCchhhHHHhHHHHHHHhcCCCC
Confidence 456777 777777655433223346678899999998 33 457789999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||....+..+.. ........... .....+.+++.+|+..+|++||+..++...+..+.
T Consensus 219 p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 219 PYVEIDPFEMAA---------------------YLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred CcCcCCHHHHHH---------------------HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 998654432110 00000000000 11123778999999999999999999888777654
No 338
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.23 E-value=8.1e-12 Score=118.43 Aligned_cols=114 Identities=17% Similarity=0.216 Sum_probs=73.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+..... -.....|++.|+|||++ .+ ..++.++|+|||||+||+|+||+
T Consensus 134 ~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~------~~---------~~~~~~sDv~slG~il~~l~tg~~ 196 (274)
T cd06609 134 EGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVI------KQ---------SGYDEKADIWSLGITAIELAKGEP 196 (274)
T ss_pred CCCEEEcccccceeeccccc--ccccccCCccccChhhh------cc---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3456677 55666554321 13457899999999999 44 45789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||....+....... .....+.... ......+.+++.+||..+|++||++.++.+
T Consensus 197 p~~~~~~~~~~~~~---------~~~~~~~~~~----------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 197 PLSDLHPMRVLFLI---------PKNNPPSLEG----------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CcccCchHHHHHHh---------hhcCCCCCcc----------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 99765433111000 0000000000 001123778999999999999999877654
No 339
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.23 E-value=2.4e-12 Score=127.27 Aligned_cols=120 Identities=15% Similarity=0.156 Sum_probs=74.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++.+...... .....+||+.|||||++ .+ ......++.++|||||||+||||++|+
T Consensus 178 ~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~-----~~~~~~~~~~~DiwSlGvilyelltG~~ 245 (370)
T cd05596 178 SGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVL------KS-----QGGDGYYGRECDWWSVGVFLYEMLVGDT 245 (370)
T ss_pred CCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECHHHh------cc-----CCCCCCCCCceeeeehhHHHHHHHhCCC
Confidence 4578888 556665433211 13357899999999998 22 001234778999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCC--CcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~--r~~~~~~~~ 160 (538)
||.+.....+. .+.. ... ....+ ........+.+++.+||..+|.+ |+++.++.+
T Consensus 246 Pf~~~~~~~~~~~i~~--~~~---~~~~~-------------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 246 PFYADSLVGTYSKIMD--HKN---SLTFP-------------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CcCCCCHHHHHHHHHc--CCC---cCCCC-------------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 99876443111 0000 000 00000 00011123678999999988887 888777644
No 340
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.23 E-value=7.3e-12 Score=123.46 Aligned_cols=65 Identities=17% Similarity=0.357 Sum_probs=50.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++...... ......||+.|||||++ .| ..++.++|||||||+||+|++|+
T Consensus 155 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~ 216 (355)
T cd07874 155 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMVRHKI 216 (355)
T ss_pred CCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3567888 5666554332 24467899999999999 44 45778999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||.+..
T Consensus 217 pf~~~~ 222 (355)
T cd07874 217 LFPGRD 222 (355)
T ss_pred CCCCCC
Confidence 998643
No 341
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.22 E-value=7.3e-12 Score=124.44 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=47.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+|+...+.... .....+||+.|||||++ .+ ..+++++|||||||+||||+||. |
T Consensus 219 ~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~elltg~~p 282 (391)
T PHA03212 219 GDVCLGDFGAACFPVDINAN-KYYGWAGTIATNAPELL------AR---------DPYGPAVDIWSAGIVLFEMATCHDS 282 (391)
T ss_pred CCEEEEeCCccccccccccc-ccccccCccCCCChhhh------cC---------CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 457787 566543332211 13468999999999998 33 56789999999999999999999 7
Q ss_pred cch
Q 009274 89 FTK 91 (538)
Q Consensus 89 f~~ 91 (538)
|..
T Consensus 283 ~~~ 285 (391)
T PHA03212 283 LFE 285 (391)
T ss_pred cCC
Confidence 643
No 342
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.22 E-value=1.2e-11 Score=118.40 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=79.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+...|+. |+++.+.......-.....+++.|||||++ .+ ..++.++||||||+++|+|+| |.
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~------~~---------~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL------FD---------HIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred CCcEEeccccccccccCccchhcccCCCCCccccCHHHH------cc---------CCcchHhHHHHHHHHHHHHHhcCC
Confidence 3467787 566655433221112235678899999998 33 457789999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+..+..+....... ... .........+.+++.+||+.+|.+||+..++.+.+.++.
T Consensus 228 ~p~~~~~~~~~~~~~~~~-------~~~-------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 228 NPYPGIAPERLFNLLKTG-------YRM-------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred CCCCCCCHHHHHHHHhCC-------CCC-------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 99875444211000000 000 000111234778999999999999999999998888765
No 343
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.22 E-value=6.9e-12 Score=122.11 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=68.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|+|||||++|+|+||+ |
T Consensus 133 ~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~~l~el~~g~~P 195 (329)
T cd05588 133 GHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred CCEEECcCccccccccCCC--ccccccCCccccCHHHH------cC---------CCCCCccceechHHHHHHHHHCCCC
Confidence 456777 44443211111 14468999999999999 43 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|....... .. ................. ..+ .....+.+++.+||..+|.+|++.
T Consensus 196 f~~~~~~~--------~~----~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 196 FDIVGMSD--------NP----DQNTEDYLFQVILEKQI-RIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred cccccccc--------cc----cccchHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 97432110 00 00000000010100000 011 122347889999999999999974
No 344
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.22 E-value=8.7e-12 Score=118.90 Aligned_cols=110 Identities=16% Similarity=0.189 Sum_probs=71.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++....... .....||+.|||||++ .+ ..++.++|+|||||++|+|++|. |
T Consensus 139 ~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~g~~P 200 (285)
T cd05632 139 GHIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVL------NN---------QRYTLSPDYWGLGCLIYEMIEGQSP 200 (285)
T ss_pred CCEEEecCCcceecCCCCc---ccCCCCCcCccChHHh------cC---------CCCCcccchHHHHHHHHHHHhCCCC
Confidence 468888 55655543321 3457899999999998 33 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
|......... ......+..............+.+++.+||..+|.+||++.
T Consensus 201 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 201 FRGRKEKVKR-----------------EEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred CCCCCHHHHH-----------------HHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 9764332100 00000010000000111223477899999999999999954
No 345
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=1.3e-08 Score=102.28 Aligned_cols=215 Identities=8% Similarity=0.071 Sum_probs=133.5
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc--CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEe
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD--SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (538)
..|.+||.+.... +.+..+...+.+.+|+|++..++++.. .+..+.+|++.++... .+....... ....++
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~~~~-----~~~~~S 251 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHN-----GAPAFS 251 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCCCCc-----CCeEEC
Confidence 3688999875443 445557778999999998877765543 3457999998765422 122121111 134899
Q ss_pred ecCCEEEEe-eCCC--cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec-CCc--EEEEECCCCceeEEEecC
Q 009274 350 TSGRYLYTG-SGDR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR-DGT--IRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 350 ~~~~~l~sg-~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-dg~--i~iwd~~~~~~~~~~~~~ 421 (538)
|||+.|+.. +.+| .|++||+.+++.... ..+...+....|+ ++.|+..+. ++. |.++|+.+++.. .+...
T Consensus 252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~ 329 (429)
T PRK03629 252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWE 329 (429)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecC
Confidence 999977754 4444 599999988776543 3344567788998 446666554 344 555577666543 33222
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCC---CcEEEEeCCc-ceeeecc-ccceEEEEEeCCCEEEEEeCCCe---EEEEecCC
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRNDK-FMKSMQT-HKGSVFAVFLEGKWLFTGGWDKT---VSVQELAG 493 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~-~~~~~~~-h~~~v~~~~~~~~~l~sgs~dg~---v~iwd~~~ 493 (538)
. . ......|+|||++++..+.+ ..|.+||... ....+.. +...-.++++||++|+.++.++. +.++++.+
T Consensus 330 ~-~-~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G 407 (429)
T PRK03629 330 G-S-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDG 407 (429)
T ss_pred C-C-CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 1 1 12236899999998876643 3577888543 2233322 11222345679999999998764 67788866
Q ss_pred CeeE
Q 009274 494 DEFE 497 (538)
Q Consensus 494 ~~~~ 497 (538)
....
T Consensus 408 ~~~~ 411 (429)
T PRK03629 408 RFKA 411 (429)
T ss_pred CCeE
Confidence 5543
No 346
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.22 E-value=1.1e-11 Score=107.36 Aligned_cols=101 Identities=19% Similarity=0.362 Sum_probs=68.3
Q ss_pred ccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh-heeeccccccCcchhhc
Q 009274 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIACL 112 (538)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~~~ 112 (538)
.-=|.-|.|||.+ .....-..+.+.|||||||+||+|+.|. ||+....+ --..+.+++.+ +..+
T Consensus 198 e~Ct~pyRAPELf------------~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q--~s~P 263 (302)
T KOG2345|consen 198 ERCTIPYRAPELF------------NVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ--ISIP 263 (302)
T ss_pred HhCCCcccCchhe------------ecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc--cccC
Confidence 4568899999988 1223467789999999999999999999 99975443 11112222221 1011
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
...+ ..+ .+.+++..||..+|.+||...++...+..+
T Consensus 264 ~~~~--------yse--------~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 264 NSSR--------YSE--------ALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred CCCC--------ccH--------HHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111 111 167899999999999999998887766554
No 347
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.21 E-value=7.1e-09 Score=101.08 Aligned_cols=263 Identities=14% Similarity=0.074 Sum_probs=152.6
Q ss_pred CCEE-EEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCc
Q 009274 262 GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (538)
Q Consensus 262 ~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (538)
++++ ++-..++.|.+.|..+.+.+..+......-..+.|+|++. ++++++.||.|.++|+.+.+....++.-..
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr-~~yv~~rdg~vsviD~~~~~~v~~i~~G~~---- 79 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGR-YLYVANRDGTVSVIDLATGKVVATIKVGGN---- 79 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SS-EEEEEETTSEEEEEETTSSSEEEEEE-SSE----
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCC-EEEEEcCCCeEEEEECCcccEEEEEecCCC----
Confidence 3444 4556789999999999999999987654434566777555 566677899999999998765444433211
Q ss_pred eeeeEEEEeecCCEEEEee-CCCcEEEEECCCCceeEEecCC-------CCCeEEEEEe--CC-EEEEEecCCcEEEEEC
Q 009274 341 RYSGIHALTTSGRYLYTGS-GDRTIKAWSLLDGTLSCTMSGH-------KSAVSTLAVC--NG-VLYSGSRDGTIRLWSL 409 (538)
Q Consensus 341 ~~~~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~--~~-~l~s~s~dg~i~iwd~ 409 (538)
....++++||+++++++ .++.+.++|.++.++++.+... ...+.++..+ .. ++++--..+.|.+.|.
T Consensus 80 --~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy 157 (369)
T PF02239_consen 80 --PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDY 157 (369)
T ss_dssp --EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEET
T ss_pred --cceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEe
Confidence 22458899999888775 5899999999999999887532 3456677666 33 4444455588888898
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeCCcce--eee----ccccceE-----------EEEE
Q 009274 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDKFM--KSM----QTHKGSV-----------FAVF 471 (538)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~----~~h~~~v-----------~~~~ 471 (538)
.+.+.+............. ..++|++++++++ ..++.|-++|..+.. ..+ ..|..+. +...
T Consensus 158 ~d~~~~~~~~i~~g~~~~D-~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~ 236 (369)
T PF02239_consen 158 SDPKNLKVTTIKVGRFPHD-GGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATS 236 (369)
T ss_dssp TTSSCEEEEEEE--TTEEE-EEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEE
T ss_pred ccccccceeeecccccccc-cccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeec
Confidence 7765543322222222333 6899999987765 456788899965432 221 1233333 3333
Q ss_pred eCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEE----ECCCeEEEEEcC
Q 009274 472 LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVG----CADRTVKVYYYG 537 (538)
Q Consensus 472 ~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg----~~dg~v~vw~~~ 537 (538)
-.+...++.-....+.+||....+........+ ........|++. +.+. ...+.|.++|..
T Consensus 237 ~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G-----~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~ 302 (369)
T PF02239_consen 237 GLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQG-----GGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKK 302 (369)
T ss_dssp BSSSSEEEEEE--TTT-STTTBTSEEEEEE-SS-----SS--EE--TT-SEEEEE-TT-SSHT-EEEEECC
T ss_pred cccceecccccCCccccchhhcCeEEEEEECCC-----CcceeecCCCCccEEeeccCCCCCceEEEEECc
Confidence 233333333333456678888877766665432 234555566665 5554 456889999875
No 348
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.20 E-value=1.4e-11 Score=117.45 Aligned_cols=109 Identities=14% Similarity=0.192 Sum_probs=69.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |++........ .....||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 139 ~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslG~~l~~l~~g~~P 200 (285)
T cd05630 139 GHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVV------KN---------ERYTFSPDWWALGCLLYEMIAGQSP 200 (285)
T ss_pred CCEEEeeccceeecCCCcc---ccCCCCCccccChHHH------cC---------CCCCCccccHHHHHHHHHHHhCCCC
Confidence 356777 45554443321 2346899999999999 33 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|....... ........ ...............+.+++.+||..+|..||+.
T Consensus 201 f~~~~~~~--------------~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 201 FQQRKKKI--------------KREEVERL---VKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred CCCCCccc--------------hHHHHHhh---hhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCC
Confidence 97642210 00000000 0000111111222347889999999999999983
No 349
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.20 E-value=5e-12 Score=121.23 Aligned_cols=114 Identities=16% Similarity=0.219 Sum_probs=73.2
Q ss_pred eeeeecccc--ccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCVG--SRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+.+++ +...... .......|++.|||||.+ .+ ..+++++|||||||++|+|++|+ |
T Consensus 153 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~s~Gvil~~l~~g~~p 215 (296)
T cd06654 153 GSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV------TR---------KAYGPKVDIWSLGIMAIEMIEGEPP 215 (296)
T ss_pred CCEEECccccchhccccc--cccCcccCCccccCHHHH------cC---------CCCCccchHHHHHHHHHHHHhCCCC
Confidence 467888554 4443332 123457899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+........ ... ..... . .......+.+++.+||..+|..||++.++.+
T Consensus 216 f~~~~~~~~~~~~~--------~~~-~~~~~--~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 216 YLNENPLRALYLIA--------TNG-TPELQ--N-------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCCCHHHhHHHHh--------cCC-CCCCC--C-------ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 97654431110000 000 00000 0 0011123778999999999999999887765
No 350
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.20 E-value=1.6e-11 Score=115.45 Aligned_cols=115 Identities=20% Similarity=0.143 Sum_probs=73.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+...+.. ...+..|+..|||||++ .+ ..++.++||||||+++|+|++ |.
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~~g~~ 202 (260)
T cd05070 139 LVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAA------LY---------GRFTIKSDVWSFGILLTELVTKGRV 202 (260)
T ss_pred ceEEeCCceeeeeccCcccc-cccCCCCCccccChHHH------hc---------CCCcchhhhHHHHHHHHHHHhcCCC
Confidence 457787 556555443321 12245677899999988 32 557789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.......+. .+. ....+ .........+.+++.+|+..+|.+||+..++...+.
T Consensus 203 p~~~~~~~~~~~~~~---------~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 203 PYPGMNNREVLEQVE---------RGYRM------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CCCCCCHHHHHHHHH---------cCCCC------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 99764333111 000 00000 000111234788999999999999999888776554
No 351
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.20 E-value=9.3e-12 Score=118.23 Aligned_cols=115 Identities=20% Similarity=0.229 Sum_probs=72.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.............+++.|||||++ .+ ..+++++|||||||++|+|++ |.
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~~~~ 220 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL------KD---------GVFTTYSDVWSFGVVLWEIATLAEQ 220 (277)
T ss_pred CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHh------hc---------CCcCchhHHHHHHHHHHHHHcCCCC
Confidence 456777 555655433221111234668899999998 33 557789999999999999999 67
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||......... .+. ..... .........+.+++.+||..+|.+||+..++.+.+
T Consensus 221 p~~~~~~~~~~~~~~----------~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 275 (277)
T cd05062 221 PYQGMSNEQVLRFVM----------EGGLL-----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275 (277)
T ss_pred CCCCCCHHHHHHHHH----------cCCcC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHh
Confidence 98765433111 000 00000 00011223478899999999999999988877654
No 352
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.20 E-value=4.3e-08 Score=95.64 Aligned_cols=292 Identities=13% Similarity=0.108 Sum_probs=163.1
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
...+..+......-..+.++ ++++++++.||.|.++|+.+++.+.+++.... ..++++++++..++++...++.+.+
T Consensus 26 ~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v 104 (369)
T PF02239_consen 26 NKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSV 104 (369)
T ss_dssp -SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEE
T ss_pred CeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeE
Confidence 33455566554443456677 89999999999999999999999999986544 5789999988877777788999999
Q ss_pred EEccCCCCCcceeeecccC---CceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeE-EecCCCCCeEEEEEe--C
Q 009274 320 WSFSFPLGHEPLKKWNEEK---DWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSC-TMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~--~ 392 (538)
+|.++.+....+....... ......+.. ++... ++++--+.+.|.+.|....+.+. .............|+ +
T Consensus 105 ~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~-s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdg 183 (369)
T PF02239_consen 105 IDAETLEPVKTIPTGGMPVDGPESRVAAIVA-SPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDG 183 (369)
T ss_dssp EETTT--EEEEEE--EE-TTTS---EEEEEE--SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTS
T ss_pred eccccccceeecccccccccccCCCceeEEe-cCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCccc
Confidence 9998766555443322111 112222322 45555 44554555888888977654332 222234566778888 3
Q ss_pred CEEEE-EecCCcEEEEECCCCceeEEEecCC---CCceEE--------EEEEcCCCCEEEEEeCCCcEEEEeCC--ccee
Q 009274 393 GVLYS-GSRDGTIRLWSLSDHSLLTVLEEDS---SGAVSS--------VLSLTAVQHTLVVSHESGSIKVWRND--KFMK 458 (538)
Q Consensus 393 ~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~ 458 (538)
++++. ...++.|-++|..+++.+..+.... +..... +......+...++.-....+.+||.. +.++
T Consensus 184 ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~ 263 (369)
T PF02239_consen 184 RYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVK 263 (369)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEE
T ss_pred ceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEE
Confidence 45544 5667899999999988776654321 111111 01112222222222222344455533 4666
Q ss_pred eeccccceEE-EEEeCCCEEEEE----eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE--EEEEE-CCCe
Q 009274 459 SMQTHKGSVF-AVFLEGKWLFTG----GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGC-ADRT 530 (538)
Q Consensus 459 ~~~~h~~~v~-~~~~~~~~l~sg----s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~sg~-~dg~ 530 (538)
++....+.+. ..+|+++++.+. ...+.|.++|.++.+......... ....+..-+.++|. +++.- .+|.
T Consensus 264 ~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~---~~~~~h~ef~~dG~~v~vS~~~~~~~ 340 (369)
T PF02239_consen 264 TIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP---GKRVVHMEFNPDGKEVWVSVWDGNGA 340 (369)
T ss_dssp EEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH---T--EEEEEE-TTSSEEEEEEE--TTE
T ss_pred EEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC---CCcEeccEECCCCCEEEEEEecCCCE
Confidence 7766655543 346799999988 445899999999987654443221 11233444445665 44443 3448
Q ss_pred EEEEEcCC
Q 009274 531 VKVYYYGK 538 (538)
Q Consensus 531 v~vw~~~~ 538 (538)
|.+||-.+
T Consensus 341 i~v~D~~T 348 (369)
T PF02239_consen 341 IVVYDAKT 348 (369)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99998653
No 353
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.20 E-value=1.5e-11 Score=116.53 Aligned_cols=118 Identities=13% Similarity=0.108 Sum_probs=76.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++.+.+...........+++.|||||++ .+ ..+++++|||||||++|+|++ |+
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 213 (272)
T cd05075 149 MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL------AD---------RVYTTKSDVWSFGVTMWEIATRGQT 213 (272)
T ss_pred CCEEECCCCcccccCcccceecCCcccCCcccCCHHHc------cC---------CCcChHHHHHHHHHHHHHHHcCCCC
Confidence 456777 566666543321111234578899999998 33 557789999999999999999 77
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. . ... .........+.+++.+||+.+|++||++.++.+.+.++
T Consensus 214 p~~~~~~~~~~~~~~~--~-------~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 214 PYPGVENSEIYDYLRQ--G-------NRL------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCHHHHHHHHHc--C-------CCC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99764333111 0000 0 000 00011122478899999999999999999988876653
No 354
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.20 E-value=4.1e-12 Score=119.07 Aligned_cols=111 Identities=20% Similarity=0.342 Sum_probs=72.0
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ +++..... ........|++.|||||++ .+ ..+++++|+||||+++|+|++|. |
T Consensus 137 ~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~aPE~~------~~---------~~~~~~~Dv~slG~i~~~l~~g~~p 199 (255)
T cd08219 137 GKVKLGDFGSARLLTSP--GAYACTYVGTPYYVPPEIW------EN---------MPYNNKSDIWSLGCILYELCTLKHP 199 (255)
T ss_pred CcEEEcccCcceeeccc--ccccccccCCccccCHHHH------cc---------CCcCchhhhhhhchhheehhhccCC
Confidence 3467774 44444322 1123468899999999998 43 45778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+.. .. ....+ . .....+.+++.+||..+|.+||+..++..
T Consensus 200 ~~~~~~~~~~~~~~~-~~-----~~~~~----~-----------~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 200 FQANSWKNLILKVCQ-GS-----YKPLP----S-----------HYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred CCCCCHHHHHHHHhc-CC-----CCCCC----c-----------ccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 9865433111 0000 00 00000 0 01113667999999999999999887654
No 355
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.20 E-value=1.5e-11 Score=116.50 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=75.6
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
-+|+. |+++.+.............+++.|||||++ .+ ..+++++|||||||++|||++ |. |
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~~---------~~~~~~~Dv~SlG~il~el~~~g~~p 215 (273)
T cd05035 151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL------AD---------RVYTSKSDVWAFGVTMWEIATRGQTP 215 (273)
T ss_pred eEEECCccceeeccccccccccccccCCccccCHhhc------cc---------CCCCcccchHHHHHHHHHHHhCCCCC
Confidence 46777 566665543321111123457899999998 33 557789999999999999999 77 8
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|.+.....+. .+. ... .. .........+.+++.+||..+|.+||+..++.+.+.++
T Consensus 216 ~~~~~~~~~~~~~~-~~~-----~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 216 YPGVENHEIYDYLR-HGN-----RL---------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCHHHHHHHHH-cCC-----CC---------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 8764333111 000 000 00 00011223478899999999999999999988877654
No 356
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.20 E-value=3.4e-12 Score=112.03 Aligned_cols=114 Identities=19% Similarity=0.262 Sum_probs=71.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.-|+- |++.|+-+- ++ -+.-.|-|+|||||.+- + .-+-+|+-++||||||++||||.||+ |
T Consensus 229 GniKlCDFGIsGrlvdS-kA--htrsAGC~~YMaPERid---------p---~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 229 GNIKLCDFGISGRLVDS-KA--HTRSAGCAAYMAPERID---------P---PDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred CCEEeecccccceeecc-cc--cccccCCccccCccccC---------C---CCCCccchhhhhhhhccchhhhhcccCC
Confidence 345565 777665533 22 34578999999999881 1 11467888999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccc-hHHHHHhhhhccCCCCCcchhhH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFV-SLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|.+-... ...+...+.+ .|..++. ...|. ...+++..||.+++..||.-..+
T Consensus 294 y~~c~td---------------Fe~ltkvln~-ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~L 346 (391)
T KOG0983|consen 294 YKGCKTD---------------FEVLTKVLNE-EPPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKL 346 (391)
T ss_pred CCCCCcc---------------HHHHHHHHhc-CCCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHH
Confidence 9984333 0000000010 1100000 01132 36778899999999999985443
No 357
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.20 E-value=1.4e-11 Score=120.18 Aligned_cols=64 Identities=23% Similarity=0.418 Sum_probs=49.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+.... ....+||+.|||||++ .| ..++.++|+|||||++|+|++|+ |
T Consensus 141 ~~~kL~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~il~~l~~g~~p 201 (333)
T cd06650 141 GEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVEMAIGRYP 201 (333)
T ss_pred CCEEEeeCCcchhhhhhc----cccCCCCccccCHHHh------cC---------CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 457887 5565554332 2357899999999999 44 45778999999999999999999 9
Q ss_pred cchhhh
Q 009274 89 FTKELI 94 (538)
Q Consensus 89 f~~~~~ 94 (538)
|.....
T Consensus 202 ~~~~~~ 207 (333)
T cd06650 202 IPPPDA 207 (333)
T ss_pred CCCcch
Confidence 986543
No 358
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.20 E-value=7e-12 Score=123.47 Aligned_cols=95 Identities=21% Similarity=0.313 Sum_probs=62.9
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhhee-eccccccCcch
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIR-CVSTKASDDNI 109 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~-~~~~~~~~~~~ 109 (538)
.....||+.|||||++ .+ ..++.++|||||||+||+|++|+ ||......... .+.
T Consensus 187 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~-------- 243 (350)
T cd05573 187 ANSTVGTPDYIAPEVL------RG---------TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKII-------- 243 (350)
T ss_pred ccccccCccccCHHHH------cC---------CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHh--------
Confidence 3457899999999999 44 46789999999999999999999 99875433111 000
Q ss_pred hhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc-hhhHHH
Q 009274 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWK 160 (538)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~-~~~~~~ 160 (538)
. +.. ....+ ........+.+++.+||. +|.+|++ +.++..
T Consensus 244 -~------~~~-~~~~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 244 -N------WKE-SLRFP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred -c------cCC-cccCC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 0 000 00000 000012347789999997 9999999 666554
No 359
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.19 E-value=1.2e-11 Score=118.73 Aligned_cols=122 Identities=11% Similarity=0.081 Sum_probs=74.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh--cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt--g~ 87 (538)
..+|+. |+++.+...+.........+++.|||||++ .+ ..++.++|||||||++|||++ |.
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 167 YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESV------LL---------GKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred CceEEccccceeecccCcceeecCcCCCCceecCHHHh------hc---------CCCCccchhhhhHHHHHHHHhcCCC
Confidence 456777 566665544322223356788999999998 32 467899999999999999998 55
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||.......+. ... .. ..................++.+++.+||+.+|.+||++.++.+.+
T Consensus 232 ~p~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L 294 (296)
T cd05051 232 QPYEHLTDQQVIENAG---------HF-----FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFL 294 (296)
T ss_pred CCCCCcChHHHHHHHH---------hc-----cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHh
Confidence 88754333111 000 00 000000000000011123488899999999999999999887654
No 360
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.19 E-value=1.8e-11 Score=117.27 Aligned_cols=121 Identities=16% Similarity=0.167 Sum_probs=77.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+...|++ |+++.+...+.........+++.|||||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~ 232 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGVLLWEIFTLGG 232 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHh------cc---------CCcCcccceeehhhHHHHHhcCCC
Confidence 3457888 555655443221112234567889999998 32 457789999999999999998 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+.. .... .............+.+++.+|+..+|.+||++.++.+.+..++
T Consensus 233 ~p~~~~~~~~~~~-----------------~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 233 SPYPGIPVEELFK-----------------LLKE---GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCCCCHHHHHH-----------------HHHc---CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 997653331110 0000 0000001112234778999999999999999999998877653
No 361
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.19 E-value=1.2e-11 Score=110.00 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=80.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
|-+-|+. |+|++-... ..+.+.|=||.|.|||++ ...+|+..||+|||||++|-||+|.
T Consensus 200 na~lKLtDfGFAK~t~~~---~~L~TPc~TPyYvaPevl---------------g~eKydkscdmwSlgVimYIlLCGyP 261 (400)
T KOG0604|consen 200 NAPLKLTDFGFAKETQEP---GDLMTPCFTPYYVAPEVL---------------GPEKYDKSCDMWSLGVIMYILLCGYP 261 (400)
T ss_pred CcceEecccccccccCCC---ccccCCcccccccCHHHh---------------CchhcCCCCCccchhHHHHHhhcCCC
Confidence 4567888 788776632 227789999999999998 3467889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||....-..|- .....=.....+..+.++...+.+. ..++++++|..+|.+|.+..++..
T Consensus 262 PFYS~hg~ais-----pgMk~rI~~gqy~FP~pEWs~VSe~--------aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 262 PFYSNHGLAIS-----PGMKRRIRTGQYEFPEPEWSCVSEA--------AKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cccccCCccCC-----hhHHhHhhccCccCCChhHhHHHHH--------HHHHHHHHhcCCchhheeHHHhhc
Confidence 99864221111 0000000112222222333333333 667999999999999999887765
No 362
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.19 E-value=2.4e-11 Score=116.83 Aligned_cols=120 Identities=14% Similarity=0.191 Sum_probs=75.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.............+++.|||||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 177 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslGvil~el~t~g~ 241 (302)
T cd05055 177 GKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI------FN---------CVYTFESDVWSYGILLWEIFSLGS 241 (302)
T ss_pred CCeEEECCCcccccccCCCceeecCCCCcccccCCHhhh------cc---------CCCCcHhHHHHHHHHHHHHHhCCC
Confidence 3467887 455544433221112235678999999998 33 557789999999999999998 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHH-HHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||......... ....... ...........+.+++.+||..+|++||+..++...+.++
T Consensus 242 ~p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 242 NPYPGMPVDSKF--------------------YKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCcCCCCchHHH--------------------HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 98754222000 0000000 0000001123478899999999999999999988876653
No 363
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=1.5e-08 Score=102.40 Aligned_cols=214 Identities=10% Similarity=0.069 Sum_probs=133.6
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc--CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEe
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD--SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (538)
..|.+||.+ +...+.+..|...+.+.+|+|++..++++.. .+..|++||+.++... .+..... ......++
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g-----~~~~~~~S 254 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPG-----MTFAPRFS 254 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCC-----cccCcEEC
Confidence 378889975 4555667778889999999998776655543 3468999999765432 1211111 11234789
Q ss_pred ecCCEEE-EeeCCCc--EEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec-CC--cEEEEECCCCceeEEEecC
Q 009274 350 TSGRYLY-TGSGDRT--IKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR-DG--TIRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 350 ~~~~~l~-sg~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~ 421 (538)
|||+.|+ +.+.++. |++||+.+++. ..+..+........|+ ++.++..+. +| .|+++|+.+++... +...
T Consensus 255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~ 332 (435)
T PRK05137 255 PDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFG 332 (435)
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecC
Confidence 9998665 5555554 78889887765 4455566666778898 446665553 33 58888987665433 3222
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCC---CcEEEEeCCc-ceeeecc-ccceEEEEEeCCCEEEEEeCC------CeEEEEe
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRNDK-FMKSMQT-HKGSVFAVFLEGKWLFTGGWD------KTVSVQE 490 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~-~~~~~~~-h~~~v~~~~~~~~~l~sgs~d------g~v~iwd 490 (538)
.+... ...|+|+|+.|+..+.+ ..|.+||... ....+.. +...-.++++||+.|+..+.+ ..++++|
T Consensus 333 -~~~~~-~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~d 410 (435)
T PRK05137 333 -GGRYS-TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVD 410 (435)
T ss_pred -CCccc-CeEECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEE
Confidence 22222 25799999999877643 3577788532 2232221 111222345589988776543 2578888
Q ss_pred cCCCee
Q 009274 491 LAGDEF 496 (538)
Q Consensus 491 ~~~~~~ 496 (538)
+.++..
T Consensus 411 l~g~~~ 416 (435)
T PRK05137 411 LTGRNE 416 (435)
T ss_pred CCCCce
Confidence 877654
No 364
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.19 E-value=2e-11 Score=117.63 Aligned_cols=119 Identities=14% Similarity=0.214 Sum_probs=79.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++.+.............+++.|||||++ .+ ..++.++||||||++||+|++ |.
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~~ 238 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGVLMWEIFTLGGS 238 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhh------cc---------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 457787 666666544322223345678899999998 33 457789999999999999999 67
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+... . .. .........+.+++.+||..+|.+||+..++.+.+.++.
T Consensus 239 p~~~~~~~~~~~~~~~~---------~--------~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 239 PYPGIPVEELFKLLKEG---------H--------RM----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred CcccCCHHHHHHHHHcC---------C--------cC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 88765444211 00000 0 00 000112234778999999999999999999999888765
No 365
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.19 E-value=7.9e-12 Score=117.63 Aligned_cols=118 Identities=20% Similarity=0.185 Sum_probs=76.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++.+...... ......|+..|||||++ .+ ..++.++|||||||++|+|+| |.
T Consensus 138 ~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~------~~---------~~~~~~~DvwslG~~l~ellt~g~ 201 (262)
T cd05071 138 NLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAA------LY---------GRFTIKSDVWSFGILLTELTTKGR 201 (262)
T ss_pred CCcEEeccCCceeeccccccc-cccCCcccceecCHhHh------cc---------CCCCchhhHHHHHHHHHHHHcCCC
Confidence 3457887 556655543321 12245678899999988 33 567889999999999999999 77
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. ....+. .. .....+.+++.+|++.+|.+||+..++...+...
T Consensus 202 ~p~~~~~~~~~~~~~~~---------~~~~~~----~~--------~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 202 VPYPGMVNREVLDQVER---------GYRMPC----PP--------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCCChHHHHHHHhc---------CCCCCC----cc--------ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 99765443111 0000 000000 00 1112377899999999999999998888776553
No 366
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.19 E-value=7e-12 Score=123.98 Aligned_cols=73 Identities=19% Similarity=0.273 Sum_probs=52.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+...... .....+||+.|||||++.... ....++.++|||||||+||+|++|+
T Consensus 178 ~~~ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~-----------~~~~~~~~~DiwSlGvilyell~G~~ 245 (371)
T cd05622 178 SGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLYEMLVGDT 245 (371)
T ss_pred CCCEEEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccC-----------CCccCCCccceeehhHHHHHHHhCCC
Confidence 3567888 666666543221 133578999999999992111 1134778999999999999999999
Q ss_pred ccchhhhh
Q 009274 88 QFTKELID 95 (538)
Q Consensus 88 pf~~~~~~ 95 (538)
||.+.+..
T Consensus 246 Pf~~~~~~ 253 (371)
T cd05622 246 PFYADSLV 253 (371)
T ss_pred CCCCCCHH
Confidence 99876443
No 367
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.19 E-value=5.1e-12 Score=120.79 Aligned_cols=117 Identities=17% Similarity=0.182 Sum_probs=72.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... .....||+.|+|||++ .+ .....++.++|||||||++|+|++|+ |
T Consensus 145 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p 209 (288)
T cd06616 145 GNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERI------DP------SARDGYDVRSDVWSLGITLYEVATGKFP 209 (288)
T ss_pred CcEEEeecchhHHhccCCc---cccccCccCccCHHHh------cc------ccccCCcchhhhhHHHHHHHHHHhCCCC
Confidence 457777 55655443221 2346899999999998 32 00135778999999999999999999 9
Q ss_pred cchhhhh--heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID--YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+.... .... +.............+.+++.+||..+|++||+..++..
T Consensus 210 ~~~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 210 YPKWNSVFDQLTQVV----------KGDP-------PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred chhcchHHHHHhhhc----------CCCC-------CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9764311 100000 0000 00000000111224778999999999999999887665
No 368
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.19 E-value=1.3e-11 Score=116.55 Aligned_cols=120 Identities=20% Similarity=0.344 Sum_probs=75.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ......|++.|||||++ .+ ..++.++|+||||+++|+|++|. |
T Consensus 143 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p 205 (267)
T cd08229 143 GVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI------HE---------NGYNFKSDIWSLGCLLYEMAALQSP 205 (267)
T ss_pred CCEEECcchhhhccccCCc--ccccccCCcCccCHHHh------cC---------CCccchhhHHHHHHHHHHHHhCCCC
Confidence 346777 44444433321 23457899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|.+....... ....+.....++... ......+.+++.+|+..+|++||+..++.+.+.++
T Consensus 206 ~~~~~~~~~~------~~~~~~~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 206 FYGDKMNLYS------LCKKIEQCDYPPLPS-----------DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred cccccchHHH------HhhhhhcCCCCCCCc-----------ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 9764332000 000000000000000 01122477899999999999999999888766554
No 369
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.19 E-value=6e-12 Score=119.68 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=76.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+-+|+. |+++...............+++.|||||++ .+ ..++.++|||||||++|||++ |.
T Consensus 146 ~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~~---------~~~~~~~Di~slG~~l~el~t~g~~ 210 (279)
T cd05109 146 NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI------LH---------RRFTHQSDVWSYGVTVWELMTFGAK 210 (279)
T ss_pred CcEEECCCCceeecccccceeecCCCccchhhCCHHHh------cc---------CCCCchhHHHHHHHHHHHHHcCCCC
Confidence 347888 566665533222112234567899999998 33 557789999999999999998 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.......+..... . ..... ........+.+++.+||..+|++||+..++.+.+..+..
T Consensus 211 p~~~~~~~~~~~~~~--~------~~~~~------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 211 PYDGIPAREIPDLLE--K------GERLP------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCCCHHHHHHHHH--C------CCcCC------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 987543321110000 0 00000 000112236789999999999999999999887776653
No 370
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.19 E-value=1.9e-11 Score=115.30 Aligned_cols=119 Identities=15% Similarity=0.200 Sum_probs=74.6
Q ss_pred eeeeeeccccccccccchhhh-hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 11 KSVAKVGCVGSRICDKEVGLF-LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..+|+.+++........... .....+++.|||||++ .+ ..++.++|||||||++|||++ |+
T Consensus 143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~ell~~g~~ 207 (266)
T cd05064 143 DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAI------QY---------HHFSSASDVWSFGIVMWEVMSYGER 207 (266)
T ss_pred CCcEEECCCcccccccccchhcccCCCCceeecCHHHH------hh---------CCccchhHHHHHHHHHHHHhcCCCC
Confidence 346778766533222211111 1134567899999998 33 567889999999999999775 99
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .++ . ....+ ........+.+++.+|++.+|.+||+..++.+.+.++
T Consensus 208 p~~~~~~~~~~~~~~---~------~~~~~------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 208 PYWDMSGQDVIKAVE---D------GFRLP------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CcCcCCHHHHHHHHH---C------CCCCC------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99765433111 000 0 00000 0011122477899999999999999999988766553
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.19 E-value=3.3e-12 Score=135.28 Aligned_cols=95 Identities=23% Similarity=0.241 Sum_probs=65.6
Q ss_pred hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhh
Q 009274 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (538)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (538)
..++||+.|||||++ .| ..+++++|||||||+||||+||+ ||.+.....+.... +
T Consensus 538 ~~~vGT~~Y~APE~l------~~---------~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~i---------l 593 (669)
T cd05610 538 ERILGTPDYLAPELL------LG---------KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNI---------L 593 (669)
T ss_pred CceeeCccccCHHHc------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---------H
Confidence 357999999999999 44 56789999999999999999999 99876444211000 0
Q ss_pred cchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
...+. +.. . .......+.+++.+||..+|.+||++.++.+
T Consensus 594 ~~~~~-~p~----~----~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~ 633 (669)
T cd05610 594 NRDIP-WPE----G----EEKLSVNAQNAIEILLTMDPTKRAGLKELKQ 633 (669)
T ss_pred hcCCC-CCc----c----cccCCHHHHHHHHHHcccChhHCcCHHHHHh
Confidence 00000 000 0 0011223677899999999999999888765
No 372
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.19 E-value=2.5e-11 Score=117.59 Aligned_cols=123 Identities=12% Similarity=0.150 Sum_probs=80.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.............+++.|||||++ .+ ..++.++|||||||+||||++ |+
T Consensus 146 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~------~~---------~~~~~~~Di~slGv~l~el~t~g~~ 210 (316)
T cd05108 146 QHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI------LH---------RIYTHQSDVWSYGVTVWELMTFGSK 210 (316)
T ss_pred CcEEEccccccccccCCCcceeccCCccceeecChHHh------cc---------CCCCchhhhHHHHHHHHHHHcCCCC
Confidence 357888 667766544332112234557889999998 33 567789999999999999998 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.+.....+..... .. ... .........+.+++.+|+..+|..||+..++...+.++..
T Consensus 211 p~~~~~~~~~~~~~~--~~-----~~~-------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 211 PYDGIPASEISSILE--KG-----ERL-------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCHHHHHHHHh--CC-----CCC-------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 997653331110000 00 000 0001122347789999999999999999999988877764
Q ss_pred CC
Q 009274 168 KP 169 (538)
Q Consensus 168 ~~ 169 (538)
.+
T Consensus 271 ~~ 272 (316)
T cd05108 271 DP 272 (316)
T ss_pred CC
Confidence 43
No 373
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.18 E-value=1.9e-11 Score=116.11 Aligned_cols=115 Identities=18% Similarity=0.222 Sum_probs=74.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+...+.........||+.|+|||++ .+ ..+++++|||||||++|+|+| |.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~~ 220 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL------KD---------GVFTTKSDVWSFGVVLWEMATLAEQ 220 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHH------hc---------CCCCcccchHHHHHHHHHhhccCCC
Confidence 457887 555655433221112346788999999998 32 557789999999999999998 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||.+.....+. .+. ... .. .. .......+.+++.+||..+|++||+..++...+
T Consensus 221 p~~~~~~~~~~~~~~-~~~-----~~-----------~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 221 PYQGLSNEEVLKFVI-DGG-----HL-----------DL----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred CCccCCHHHHHHHHh-cCC-----CC-----------CC----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 99765444211 000 000 00 00 001122477899999999999999988877654
No 374
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.18 E-value=2.1e-11 Score=114.38 Aligned_cols=113 Identities=17% Similarity=0.214 Sum_probs=74.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++..... .....++..|||||++ ++ ..++.++|||||||++|+|++ |+
T Consensus 138 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~i~~~l~~~g~ 197 (256)
T cd05082 138 DNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL------RE---------KKFSTKSDVWSFGILLWEIYSFGR 197 (256)
T ss_pred CCcEEecCCccceecccc-----CCCCccceeecCHHHH------cc---------CCCCchhhhHHHHHHHHHHHhCCC
Confidence 3467888 455544432 2245667899999998 33 457789999999999999998 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+. .. . ...........+.+++.+|+..+|++||+..++.+.+.+
T Consensus 198 ~p~~~~~~~~~~~~~~--~~------~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 198 VPYPRIPLKDVVPRVE--KG------Y-------------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHh--cC------C-------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 98764333111 000 00 0 000001122347789999999999999999988876653
No 375
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.18 E-value=2.1e-11 Score=115.52 Aligned_cols=116 Identities=15% Similarity=0.200 Sum_probs=73.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++....... ....+.|++.|+|||++ .+. ......++.++|+|||||++|+|++|. |
T Consensus 148 ~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~------~~~----~~~~~~~~~~~Dv~slGv~l~el~~g~~p 215 (272)
T cd06637 148 AEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVI------ACD----ENPDATYDFKSDLWSLGITAIEMAEGAPP 215 (272)
T ss_pred CCEEEccCCCceecccccc--cCCcccccccccCHhHh------ccc----cCcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 55555443221 13458899999999998 220 001245778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh--hcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK--FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .. ........ .......+.+++.+||..+|.+||+..++.+
T Consensus 216 ~~~~~~~~~~----------------~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 216 LCDMHPMRAL----------------FL-----IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ccccCHHHHH----------------HH-----HhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 9754333100 00 00000000 0011124778999999999999999877654
No 376
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.18 E-value=7e-12 Score=117.66 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=67.6
Q ss_pred cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhh
Q 009274 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (538)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~ 96 (538)
|||=.+...+. .+.-+||++|||||++ . ++.|+...|-|||||+||||+.|+ ||...-..
T Consensus 332 GLAvei~~g~~---~~~rvGT~GYMAPEvl------~---------ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK- 392 (591)
T KOG0986|consen 332 GLAVEIPEGKP---IRGRVGTVGYMAPEVL------Q---------NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK- 392 (591)
T ss_pred ceEEecCCCCc---cccccCcccccCHHHH------c---------CCcccCCccHHHHHhHHHHHHcccCchhhhhhh-
Confidence 78877776642 3345999999999999 3 367899999999999999999999 99864222
Q ss_pred eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccc-hHHHHHhhhhccCCCCCcchh
Q 009274 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFV-SLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~~p~~r~~~~ 156 (538)
.++.. +.+. +.+.+. ..+..|. +...+....|+++|.+|-...
T Consensus 393 -------vk~eE--vdrr-------~~~~~~-ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 393 -------VKREE--VDRR-------TLEDPE-EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred -------hhHHH--HHHH-------Hhcchh-hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 00000 0000 000000 1112232 255677779999999997754
No 377
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.18 E-value=1.9e-11 Score=114.69 Aligned_cols=117 Identities=14% Similarity=0.132 Sum_probs=75.1
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
..+|+. |+++.+....... ..+.-.+++.|||||++ .+ ..++.++|+|||||++|||++ |.
T Consensus 132 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~t~g~ 196 (257)
T cd05116 132 HYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECM------NY---------YKFSSKSDVWSFGVLMWEAFSYGQ 196 (257)
T ss_pred CeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHh------cc---------CCcCchhHHHHHHHHHHHHHhCCC
Confidence 457887 5566554332210 01223457899999998 32 456789999999999999998 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+. . .. .++ .......++.+++.+|+..+|+.||+..++...+..
T Consensus 197 ~p~~~~~~~~~~~~i~---~------~~--------~~~----~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 197 KPYKGMKGNEVTQMIE---S------GE--------RME----CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCHHHHHHHHH---C------CC--------CCC----CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 99765333111 000 0 00 000 001123358889999999999999999988876554
No 378
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.18 E-value=1.3e-11 Score=118.34 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh--cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt--g~ 87 (538)
..+|+. |+++...............+++.|||||++ .+ ..++.++|+|||||++|+|++ |.
T Consensus 166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwSlG~~l~el~~~~~~ 230 (295)
T cd05097 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESI------LL---------GKFTTASDVWAFGVTLWEMFTLCKE 230 (295)
T ss_pred CcEEecccccccccccCcceeccCcCcCceeecChhhh------cc---------CCcCchhhHHHHHHHHHHHHHcCCC
Confidence 357888 455554433222112345678899999998 33 567899999999999999998 55
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||...+...+. .........................+.+++.+|++.+|++||+..++.+.+.
T Consensus 231 ~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 231 QPYSLLSDEQVI-------------ENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCcccChHHHH-------------HHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 88764333111 0000000000000000001112235889999999999999999988876543
No 379
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.18 E-value=1.9e-08 Score=91.55 Aligned_cols=233 Identities=15% Similarity=0.125 Sum_probs=139.4
Q ss_pred CCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC----ce----------EEEEecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 252 RDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF----SH----------VHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 252 ~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~----~~----------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
...|+|++|- +..|+.|... -|.+|..... .. +...++| .+|+++.|.+++..++-++-.|
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gs 217 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGS 217 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCc
Confidence 4679999997 6778888755 5999986421 11 1222345 7899999999877665555568
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (538)
..|.|||.+++........- ........++||+++|++++-|+..++|+..+...........+.|..-.|+ +
T Consensus 218 ssi~iWdpdtg~~~pL~~~g-----lgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcG 292 (445)
T KOG2139|consen 218 SSIMIWDPDTGQKIPLIPKG-----LGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCG 292 (445)
T ss_pred ceEEEEcCCCCCcccccccC-----CCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCC
Confidence 89999999987665444111 1223467899999999999999999999654432222222234588888998 4
Q ss_pred C-EEEEEecCCcEEEEECCCCce-------------eEEEec---CCC----CceEEEEEEcCCCCEEEEEeCCC-----
Q 009274 393 G-VLYSGSRDGTIRLWSLSDHSL-------------LTVLEE---DSS----GAVSSVLSLTAVQHTLVVSHESG----- 446 (538)
Q Consensus 393 ~-~l~s~s~dg~i~iwd~~~~~~-------------~~~~~~---~~~----~~~~~~~~~~~~~~~l~~~~~dg----- 446 (538)
. +|++++..-.++-........ +..+.. ... +.....++|.|.|.++++....+
T Consensus 293 sfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~ 372 (445)
T KOG2139|consen 293 SFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLL 372 (445)
T ss_pred CEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhh
Confidence 4 555555544443222211100 000000 000 11223479999999999876543
Q ss_pred ---cEEEEeCCc-ceeee------ccccceEEEEEe---CCCEEEEEeCCCeEEEEec
Q 009274 447 ---SIKVWRNDK-FMKSM------QTHKGSVFAVFL---EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 447 ---~i~iwd~~~-~~~~~------~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~ 491 (538)
.|.+||+++ +...+ .+......++.+ ++.+|..+=..|.+.-|++
T Consensus 373 ~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 373 CKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred hhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeee
Confidence 356677554 22222 122223334444 5556666656677766665
No 380
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.17 E-value=2.5e-11 Score=117.14 Aligned_cols=120 Identities=17% Similarity=0.200 Sum_probs=76.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+.............+++.|||||++ .+ ..++.++|+|||||++|+|++ |.
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~~l~el~~~g~~ 241 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL------FD---------RIYTHQSDVWSFGVLLWEIFTLGGS 241 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHh------cc---------CCCCcHHHHHHHHHHHHHHHcCCCC
Confidence 457887 455554432211112223456899999998 43 457789999999999999999 77
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+.. ...... ...........+.+++.+||..+|.+||+..++.+.+..+.
T Consensus 242 p~~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 242 PYPGVPVEELFK-----------------LLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred CCCcCCHHHHHH-----------------HHHcCC---CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 887654331110 000000 00000112234778999999999999999999998888765
No 381
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.17 E-value=7.7e-10 Score=113.45 Aligned_cols=187 Identities=18% Similarity=0.241 Sum_probs=134.7
Q ss_pred CCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC
Q 009274 304 DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS 383 (538)
Q Consensus 304 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~ 383 (538)
.+..++.+..+..+.+||.........+...... ......+...+++.-++++|+.-+.|.+|+....+.-..+.+|.+
T Consensus 98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~-~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG 176 (967)
T KOG0974|consen 98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERC-TLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG 176 (967)
T ss_pred hcceEEEEEcCceEEEEecccCceehhcCCCceE-EEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence 4456678888899999998754322221111000 001112234455555999999999999999874444446899999
Q ss_pred CeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe-CCcceeee
Q 009274 384 AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR-NDKFMKSM 460 (538)
Q Consensus 384 ~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~~~~ 460 (538)
.+.++.++ +.++++.|+|+++++|++.+.+........|...+.. +++.|+ .+++++.|-+.++|+ ..+.+..+
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~-~~~~~n--~i~t~gedctcrvW~~~~~~l~~y 253 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA-CCFLPN--RIITVGEDCTCRVWGVNGTQLEVY 253 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE-EEeccc--eeEEeccceEEEEEecccceehhh
Confidence 99999997 6699999999999999999988776333334455554 467776 899999999999997 44555677
Q ss_pred ccccc-eEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 461 QTHKG-SVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 461 ~~h~~-~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
..|.+ .+..+.. +...++|++.||.+++||+.+.
T Consensus 254 ~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 254 DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 88765 4566654 6778999999999999998643
No 382
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.17 E-value=2.6e-11 Score=122.18 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=45.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
..+|+. |+++.............++||+.|||||++ .| ..++.++|||||||+||||++|.
T Consensus 297 ~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~------~~---------~~~~~~sDvwSlGviL~El~~g~ 359 (461)
T PHA03211 297 EDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL------AG---------DPYTPSVDIWSAGLVIFEAAVHT 359 (461)
T ss_pred CCEEEcccCCceecccccccccccccCCCcCCcCHHHH------cC---------CCCCchHHHHHHHHHHHHHHHcC
Confidence 457888 566655433222223457899999999999 44 56789999999999999999987
No 383
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.17 E-value=2.9e-09 Score=102.37 Aligned_cols=233 Identities=17% Similarity=0.142 Sum_probs=147.0
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
.+...-+.+..+|++..++++|..--.|++||+.... -.+..+.........-++-|-..++.-..|.+|-+...
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS-----LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak 123 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS-----LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK 123 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccce-----eeeeecccccceeEEEeccchhhheEeecCceeeehhh
Confidence 3667778999999999999999999999999987432 11222222122222222222223333344555544321
Q ss_pred CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 447 (538)
.|.. ..++ -...-.+++++ .--|++++....|+-+++..|..+..+..... ...++.+++...+|++|+.+|.
T Consensus 124 -~G~h-y~~R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~--~lN~v~in~~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 124 -YGRH-YRTR-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSG--ELNVVSINEEHGLLACGTEDGV 198 (703)
T ss_pred -cCee-eeee-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccc--cceeeeecCccceEEecccCce
Confidence 1111 0111 11233456666 23456666667899999999998888876532 2334688999999999999999
Q ss_pred EEEEeCCc--ceee------eccccc-----eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCce
Q 009274 448 IKVWRNDK--FMKS------MQTHKG-----SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVI 512 (538)
Q Consensus 448 i~iwd~~~--~~~~------~~~h~~-----~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 512 (538)
|..||.+. .+.. +..|.+ .|+++.| +|-.+++|+.+|.|.|||++..+......|...+ .+
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~----pi 274 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYEL----PI 274 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCcc----ce
Confidence 99999552 2222 222333 4899999 4789999999999999999998876655555433 34
Q ss_pred EEEEEe--C-CEEEEEECCCeEEEEEc
Q 009274 513 TALLYW--Q-GKLFVGCADRTVKVYYY 536 (538)
Q Consensus 513 ~~~~~~--~-~~l~sg~~dg~v~vw~~ 536 (538)
..+.|. + +.-++......++|||=
T Consensus 275 ~~l~~~~~~~q~~v~S~Dk~~~kiWd~ 301 (703)
T KOG2321|consen 275 KKLDWQDTDQQNKVVSMDKRILKIWDE 301 (703)
T ss_pred eeecccccCCCceEEecchHHhhhccc
Confidence 444443 2 23455555668889974
No 384
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.17 E-value=2.4e-11 Score=114.20 Aligned_cols=116 Identities=19% Similarity=0.135 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+...+.+ ......++..|||||++ .+ ..++.++||||||+++|+|+| |+
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~------~~---------~~~~~~~Di~slG~~l~el~t~g~~ 202 (260)
T cd05069 139 LVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAA------LY---------GRFTIKSDVWSFGILLTELVTKGRV 202 (260)
T ss_pred CeEEECCCccceEccCCccc-ccCCCccchhhCCHHHh------cc---------CCcChHHHHHHHHHHHHHHHhCCCC
Confidence 457887 555555433221 12235678899999988 33 557789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+. ....+. ........+.+++.+||..+|.+||+..++.+.+..
T Consensus 203 p~~~~~~~~~~~~~~---------~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 203 PYPGMVNREVLEQVE---------RGYRMP------------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCHHHHHHHHH---------cCCCCC------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 99875433111 000 000000 000112237889999999999999999888776653
No 385
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.17 E-value=2.7e-11 Score=116.63 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=48.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... ......||+.|||||++ .+ ...++.++|||||||+||+|++|.
T Consensus 139 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~ 202 (303)
T cd07869 139 TGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVL------LG--------STEYSTCLDMWGVGCIFVEMIQGVA 202 (303)
T ss_pred CCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4567888 44544332221 24467899999999998 32 134677899999999999999999
Q ss_pred ccchh
Q 009274 88 QFTKE 92 (538)
Q Consensus 88 pf~~~ 92 (538)
||.+.
T Consensus 203 pf~~~ 207 (303)
T cd07869 203 AFPGM 207 (303)
T ss_pred CCCCC
Confidence 99763
No 386
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.17 E-value=1.6e-11 Score=120.41 Aligned_cols=62 Identities=19% Similarity=0.460 Sum_probs=48.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++..... .+..+||+.|||||++ .+ ...++.++|||||||+||+|++|+ |
T Consensus 155 ~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~p 215 (343)
T cd07878 155 CELRILDFGLARQADDE-----MTGYVATRWYRAPEIM------LN--------WMHYNQTVDIWSVGCIMAELLKGKAL 215 (343)
T ss_pred CCEEEcCCccceecCCC-----cCCccccccccCchHh------cC--------CccCCchhhhHhHHHHHHHHHHCCCC
Confidence 457888 566665543 3467899999999998 32 135678999999999999999999 9
Q ss_pred cchh
Q 009274 89 FTKE 92 (538)
Q Consensus 89 f~~~ 92 (538)
|.+.
T Consensus 216 f~~~ 219 (343)
T cd07878 216 FPGN 219 (343)
T ss_pred CCCC
Confidence 9764
No 387
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.17 E-value=3.2e-11 Score=114.90 Aligned_cols=125 Identities=15% Similarity=0.155 Sum_probs=74.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... .....||+.|+|||++ .+ ...++.++|||||||++|+|++|. |
T Consensus 136 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slGv~l~el~~~~~p 198 (282)
T cd07831 136 DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECL------LT--------DGYYGPKMDIWAVGCVFFEILSLFPL 198 (282)
T ss_pred CCeEEEecccccccccCCC---cCCCCCCcccCChhHh------hc--------CCCCCcchhHHHHHHHHHHHHcCCcC
Confidence 678888 55665543321 3457899999999987 22 134678999999999999999999 9
Q ss_pred cchhhhhhe-eeccccccCcchhhcchhhHHHHHHH--------------HHHHhhhcCccchHHHHHhhhhccCCCCCc
Q 009274 89 FTKELIDYI-RCVSTKASDDNIACLGMYMAWMEKVT--------------YLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (538)
Q Consensus 89 f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~ 153 (538)
|.+.+.... ..+... .......+..... .............+.+++.+||..+|.+||
T Consensus 199 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 271 (282)
T cd07831 199 FPGTNELDQIAKIHDV-------LGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI 271 (282)
T ss_pred CCCCCHHHHHHHHHHH-------cCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc
Confidence 976543211 100000 0000000000000 000000111233588899999999999999
Q ss_pred chhhHHH
Q 009274 154 LLTNVWK 160 (538)
Q Consensus 154 ~~~~~~~ 160 (538)
++.++.+
T Consensus 272 ~~~~~l~ 278 (282)
T cd07831 272 TAKQALR 278 (282)
T ss_pred CHHHHhh
Confidence 9877654
No 388
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.17 E-value=9.9e-12 Score=120.32 Aligned_cols=119 Identities=15% Similarity=0.225 Sum_probs=76.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++.+...+..-......+++.|||||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslG~~l~el~~~g~~ 235 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGILMWEIFTLGGS 235 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHH------cc---------CCcCccchhhHHHHHHHHHHhCCCC
Confidence 456887 566655433211112223456789999998 33 557789999999999999999 77
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+... . .+ .........+.+++.+||..+|.+||+..++...+.++.
T Consensus 236 p~~~~~~~~~~~~~~~~-~----------------~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 236 PYPGIPVEELFKLLREG-H----------------RM----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CCCCCCHHHHHHHHHcC-C----------------CC----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 99765433111 00000 0 00 000111224778999999999999999999888877764
No 389
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=2.9e-11 Score=114.39 Aligned_cols=135 Identities=20% Similarity=0.313 Sum_probs=88.1
Q ss_pred EEeeccceeeeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhh
Q 009274 2 ILVMGRRVTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACI 79 (538)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~ 79 (538)
||++| +-+-|+| ||||.+..++ | .|+.+-|-+|.|||++ +. .+.|+.+.|+|++|||
T Consensus 141 iLi~~----~~~iKiaDFGLARev~Skp-P--YTeYVSTRWYRAPEvL---Lr-----------s~~Ys~pvD~wA~GcI 199 (538)
T KOG0661|consen 141 ILISG----NDVIKIADFGLAREVRSKP-P--YTEYVSTRWYRAPEVL---LR-----------SGYYSSPVDMWAVGCI 199 (538)
T ss_pred eEecc----cceeEecccccccccccCC-C--cchhhhcccccchHHh---hh-----------ccccCCchHHHHHHHH
Confidence 78888 4456899 9999999886 4 8899999999999999 22 3889999999999999
Q ss_pred hhhhhhcC-ccchhhhh-hee--e--ccccccCcchhhcchhhHHHHH----HHH----HHHhhhcCccchHHHHHhhhh
Q 009274 80 LLSLLIGE-QFTKELID-YIR--C--VSTKASDDNIACLGMYMAWMEK----VTY----LLENKFGSEFVSLQLMFCQCL 145 (538)
Q Consensus 80 l~~lltg~-pf~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~l~~~~~~~l 145 (538)
++|+.+=+ =|++.+.- .|. | +-.+... .|..-..+... .|+ -...-.+....+..+++.++|
T Consensus 200 ~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~----~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll 275 (538)
T KOG0661|consen 200 MAELYSLRPLFPGASEIDQIYKICEVLGTPDKD----SWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLL 275 (538)
T ss_pred HHHHHHhcccCCCCcHHHHHHHHHHHhCCCccc----cchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHh
Confidence 99999999 67664322 222 1 0000000 00000000000 000 000111223344788999999
Q ss_pred ccCCCCCcchhhHHHH
Q 009274 146 NFDPGCRPLLTNVWKC 161 (538)
Q Consensus 146 ~~~p~~r~~~~~~~~~ 161 (538)
++||++||++.++.+.
T Consensus 276 ~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 276 AWDPDKRPTASQALQH 291 (538)
T ss_pred cCCCccCccHHHHhcC
Confidence 9999999998876653
No 390
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.17 E-value=8.4e-12 Score=121.74 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=73.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+...... ......||+.|||||++...... ....++.++|||||||+||+|++|+ |
T Consensus 139 ~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~DiwslG~il~el~~g~~P 208 (330)
T cd05601 139 GHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGD---------GKGTYGVECDWWSLGVIAYEMIYGRSP 208 (330)
T ss_pred CCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhcccccc---------ccCCCCCcceeecccceeeeeccCCCC
Confidence 467888 666666543322 23456899999999998211111 1345778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .+. .... ... .+ ........+.+++.+||. +|.+||+..++..
T Consensus 209 f~~~~~~~~~~~i~--~~~~---~~~-----------~~--~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 209 FHEGTSAKTYNNIM--NFQR---FLK-----------FP--EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCHHHHHHHHH--cCCC---ccC-----------CC--CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 9865433111 000 0000 000 00 001112236778888997 9999999876543
No 391
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.16 E-value=5.3e-09 Score=92.52 Aligned_cols=146 Identities=15% Similarity=0.199 Sum_probs=94.6
Q ss_pred EEEeecCCEEEEeeC----------CCcEEEEECCC-CceeEEec-CCCCCeEEEEEe--CCEE--EEEecCCcEEEEEC
Q 009274 346 HALTTSGRYLYTGSG----------DRTIKAWSLLD-GTLSCTMS-GHKSAVSTLAVC--NGVL--YSGSRDGTIRLWSL 409 (538)
Q Consensus 346 ~~~~~~~~~l~sg~~----------dg~i~iwd~~~-~~~~~~~~-~h~~~v~~l~~~--~~~l--~s~s~dg~i~iwd~ 409 (538)
+.++++|++|++-.. -+...+|.++. ...+..+. ...++|.+++|+ ++.+ +.|..++.|.+||+
T Consensus 11 ~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~ 90 (194)
T PF08662_consen 11 LHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDV 90 (194)
T ss_pred EEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcC
Confidence 356666764443322 12344454422 23344443 245579999999 3444 33556789999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC---CcEEEEeCCcceeeeccccceEEEEEe--CCCEEEEEeC--
Q 009274 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRNDKFMKSMQTHKGSVFAVFL--EGKWLFTGGW-- 482 (538)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~-- 482 (538)
+ ++.+..+.. .... .+.|+|+|+++++++.+ |.+.+||.++.......+...+..+.| +|++|++++.
T Consensus 91 ~-~~~i~~~~~---~~~n-~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 91 K-GKKIFSFGT---QPRN-TISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTSP 165 (194)
T ss_pred c-ccEeEeecC---CCce-EEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEecc
Confidence 6 666666643 2223 36999999999998754 669999987644443333344556655 9999999874
Q ss_pred ----CCeEEEEecCCCee
Q 009274 483 ----DKTVSVQELAGDEF 496 (538)
Q Consensus 483 ----dg~v~iwd~~~~~~ 496 (538)
|+.++||+..+..+
T Consensus 166 r~~~dng~~Iw~~~G~~l 183 (194)
T PF08662_consen 166 RLRVDNGFKIWSFQGRLL 183 (194)
T ss_pred ceeccccEEEEEecCeEe
Confidence 78899999976654
No 392
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.16 E-value=3.2e-11 Score=113.82 Aligned_cols=118 Identities=17% Similarity=0.199 Sum_probs=75.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++...............+++.|||||++ .+ ..+++++||||||+++|+|++ |.
T Consensus 143 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~------~~---------~~~~~~~Dv~slG~~l~~l~~~g~~ 207 (266)
T cd05033 143 LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI------AY---------RKFTSASDVWSFGIVMWEVMSYGER 207 (266)
T ss_pred CCEEECccchhhcccccccceeccCCCCCccccChhhh------cc---------CCCccccchHHHHHHHHHHHccCCC
Confidence 456777 455655422222112234567899999998 33 457789999999999999998 98
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+. . ....+ ........+.+++.+|++.+|++||+..++.+.+.++
T Consensus 208 p~~~~~~~~~~~~~~---~-----~~~~~-------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 208 PYWDMSNQDVIKAVE---D-----GYRLP-------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCHHHHHHHHH---c-----CCCCC-------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99654333111 000 0 00000 0011223478899999999999999999998877654
No 393
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.16 E-value=8.5e-12 Score=117.13 Aligned_cols=108 Identities=18% Similarity=0.354 Sum_probs=69.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC--c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE--Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~--p 88 (538)
+.|+. |++....+. ..+.|++.|||||++ .+ ...++.++|||||||++|+|++|. |
T Consensus 146 ~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 146 FIKLSDPGISITVLPK------EILLERIPWVPPECI------EN--------PQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred eEEecccccccccCCc------hhccccCCccCchhc------cC--------CCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 45666 444444332 247899999999998 32 134678999999999999999995 6
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
|....+.... .........+ ......+.+++.+||+.+|++||+..++.+.+
T Consensus 206 ~~~~~~~~~~------------------~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 206 LSALDSQKKL------------------QFYEDRHQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred hhhccHHHHH------------------HHHHccccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 6554332000 0000000000 11223478899999999999999998887643
No 394
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.16 E-value=1.6e-11 Score=129.90 Aligned_cols=100 Identities=16% Similarity=0.229 Sum_probs=66.4
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhhc
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (538)
.++||+.|||||++ .| ..++.++|||||||++|||+||+ ||.......+. ..
T Consensus 190 ~~vGT~~YmAPE~l------~g---------~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~------------~~ 242 (932)
T PRK13184 190 KIVGTPDYMAPERL------LG---------VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS------------YR 242 (932)
T ss_pred CCCCCCCCCCHHHh------cC---------CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh------------hh
Confidence 36899999999998 44 56788999999999999999999 99764333111 00
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch-hhHHHHHHHhh
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL-TNVWKCIRELI 166 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~-~~~~~~l~~l~ 166 (538)
........ . .........+.+++.+||+.+|.+|++. .++.+.+...+
T Consensus 243 ~~i~~P~~-~-----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 243 DVILSPIE-V-----APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred hhccChhh-c-----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00000000 0 0001122347789999999999999875 45656666654
No 395
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.16 E-value=1.7e-11 Score=115.79 Aligned_cols=116 Identities=19% Similarity=0.339 Sum_probs=75.2
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++....... ......|++.|||||++ .+ ..++.++|+||||+++|+|++|+ ||
T Consensus 144 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~g~~p~ 206 (267)
T cd08228 144 VVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI------HE---------NGYNFKSDIWSLGCLLYEMAALQSPF 206 (267)
T ss_pred CEEECccccceeccchhH--HHhcCCCCccccChhhh------cc---------CCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 45666 44555543322 13457899999999998 32 44678999999999999999999 98
Q ss_pred chhhhh--hee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 90 TKELID--YIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 90 ~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
...... .+. .+. ....++..... ....+.+++.+|+..+|++||+..++.+.+.++
T Consensus 207 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 207 YGDKMNLFSLCQKIE---------QCDYPPLPTEH-----------YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ccccccHHHHHHHHh---------cCCCCCCChhh-----------cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 654222 000 000 00000000000 112377899999999999999999998877664
No 396
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.16 E-value=1.4e-08 Score=102.58 Aligned_cols=212 Identities=15% Similarity=0.144 Sum_probs=132.0
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcC--CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEe
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (538)
..|.+||... ...+.+..+...+.+.+|+|++..++++... +..|++||+.++... .+..... ......++
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g-----~~~~~~~S 256 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRG-----INGAPSFS 256 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCC-----CccCceEC
Confidence 3689999854 4455566677889999999987766555433 346999999765432 1111111 11234889
Q ss_pred ecCCEEE-EeeCCC--cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe-cCCc--EEEEECCCCceeEEEecC
Q 009274 350 TSGRYLY-TGSGDR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS-RDGT--IRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 350 ~~~~~l~-sg~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~dg~--i~iwd~~~~~~~~~~~~~ 421 (538)
|+|+.++ +.+.+| .|++||+.+++.. .+..+.......+|+ ++.++.++ .++. |+++|+.+++...... .
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~-~ 334 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF-Q 334 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec-C
Confidence 9998665 445555 5999999887653 455555556678898 44666555 3444 7777777766433222 1
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCCC---cEEEEeCCc-ceeeeccccceE--EEEEeCCCEEEEEeCC---CeEEEEecC
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHESG---SIKVWRNDK-FMKSMQTHKGSV--FAVFLEGKWLFTGGWD---KTVSVQELA 492 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~-~~~~~~~h~~~v--~~~~~~~~~l~sgs~d---g~v~iwd~~ 492 (538)
. . .....+|+|+|+.++..+.++ .|.+||... ....+. +.... .++++||++++..+.+ +.+.++++.
T Consensus 335 g-~-~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~ 411 (433)
T PRK04922 335 G-N-YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD 411 (433)
T ss_pred C-C-CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 1 1 122368999999998765443 588999543 222332 22122 2445599988777653 457888886
Q ss_pred CCe
Q 009274 493 GDE 495 (538)
Q Consensus 493 ~~~ 495 (538)
+..
T Consensus 412 g~~ 414 (433)
T PRK04922 412 GRV 414 (433)
T ss_pred CCc
Confidence 654
No 397
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.15 E-value=2.6e-11 Score=108.23 Aligned_cols=64 Identities=23% Similarity=0.553 Sum_probs=54.7
Q ss_pred eeeeeec--ccccccc-ccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 11 KSVAKVG--CVGSRIC-DKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
+++-|+. |+||.+. +.+. -|+.+-|-+|.|||.+ .| ..+|+...||||+||++.||++|+
T Consensus 137 ~gvvKLCDFGFAR~L~~pgd~---YTDYVATRWYRaPELL------vG--------DtqYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 137 NGVVKLCDFGFARTLSAPGDN---YTDYVATRWYRAPELL------VG--------DTQYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred CCcEEeccchhhHhhcCCcch---hhhhhhhhhccChhhh------cc--------cCcCCCcccchhhhHHHHHHhcCC
Confidence 5788998 8999998 4443 8899999999999999 44 468899999999999999999999
Q ss_pred -ccch
Q 009274 88 -QFTK 91 (538)
Q Consensus 88 -pf~~ 91 (538)
-|++
T Consensus 200 pL~PG 204 (396)
T KOG0593|consen 200 PLWPG 204 (396)
T ss_pred cCCCC
Confidence 4554
No 398
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.15 E-value=4.9e-11 Score=112.10 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=75.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+.............+++.|+|||++ .+ ..++.++||||||+++|+|++ |.
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~g~~ 206 (262)
T cd00192 142 LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL------KD---------GIFTSKSDVWSFGVLLWEIFTLGAT 206 (262)
T ss_pred CcEEEcccccccccccccccccccCCCcCccccCHHHh------cc---------CCcchhhccHHHHHHHHHHHhcCCC
Confidence 557887 455666544322223457889999999998 33 467789999999999999999 57
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||.......+. .+... . .. .........+.+++.+||..+|.+||++.++.+.+
T Consensus 207 p~~~~~~~~~~~~~~~~-~-----~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 207 PYPGLSNEEVLEYLRKG-Y-----RL---------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCHHHHHHHHHcC-C-----CC---------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 99875333111 00000 0 00 00001122477899999999999999998887643
No 399
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.15 E-value=1.8e-11 Score=114.87 Aligned_cols=115 Identities=21% Similarity=0.199 Sum_probs=70.7
Q ss_pred eeeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+++ +++.....+.........+.+.|+|||.+ ++ ..++.++||||||+++|||++ |+
T Consensus 139 ~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~------~~---------~~~~~ksDVysfG~~l~ei~~~~~ 203 (259)
T PF07714_consen 139 NGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVL------KD---------GEYTKKSDVYSFGMLLYEILTLGK 203 (259)
T ss_dssp TTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHH------HH---------SEESHHHHHHHHHHHHHHHHTTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccc------cc---------cccccccccccccccccccccccc
Confidence 46789984 45555222222223457788999999998 32 447799999999999999999 67
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. +.+....... .......+.+++.+|++.+|.+||+..++.+.
T Consensus 204 ~p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~ 258 (259)
T PF07714_consen 204 FPFSDYDNEEII---------------------EKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQE 258 (259)
T ss_dssp GTTTTSCHHHHH---------------------HHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred cccccccccccc---------------------ccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence 98765333111 0000000000 01112237789999999999999999888764
No 400
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.15 E-value=3.7e-11 Score=114.52 Aligned_cols=133 Identities=14% Similarity=0.206 Sum_probs=77.8
Q ss_pred eeeeec--cccccccccchhhhh-hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFL-SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
...|+. |+++........... ....++..|||||++ .+ ..+++++||||||+++|+|+||.
T Consensus 144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~------~~---------~~~~~~~Di~slG~~l~el~tg~~ 208 (283)
T cd05080 144 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL------KE---------NKFSYASDVWSFGVTLYELLTHCD 208 (283)
T ss_pred CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHh------cc---------cCCCcccccHHHHHHHHHHHhCCC
Confidence 467887 566665543321111 224567789999998 33 45778999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||..........+...... .....+........... .......+.+++.+|++.+|.+||+..++...+..+
T Consensus 209 p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 209 SKQSPPKKFEEMIGPKQGQ------MTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCcchhhhhhcccccc------cchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 9865432210000000000 00000000000000000 011234588999999999999999999988877654
No 401
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.15 E-value=2.7e-11 Score=116.22 Aligned_cols=124 Identities=13% Similarity=0.074 Sum_probs=74.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh--cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt--g~ 87 (538)
..+|+. |+++.+.............+++.|||||+. .+ +.++.++|+|||||+||||++ |.
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~~---------~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 167 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI------LL---------GKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred CCEEeccCcccccccCCcceeccCcCcCccccCCHHHH------hc---------CCccchhhhhHHHHHHHHHHHhCCC
Confidence 456777 556655433211112235567899999987 33 567889999999999999998 56
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.......+. .........................+.+++.+||..+|.+||++.++.+.+.
T Consensus 232 ~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 232 QPYSQLSDEQVI-------------ENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCccccChHHHH-------------HHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 88765433111 0000000000000000000112234788999999999999999998877553
No 402
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.15 E-value=8e-09 Score=104.25 Aligned_cols=211 Identities=15% Similarity=0.118 Sum_probs=132.6
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCC---CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC--cEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~ 318 (538)
..+..|...+.+.+|+ ++.|+..+.+ ..|.+||+.+++... +..+.+...+..|+|++..++++.+.+| .|+
T Consensus 197 ~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy 275 (433)
T PRK04922 197 QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIY 275 (433)
T ss_pred eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEE
Confidence 3455677789999998 8888887743 469999998876543 3344455568899998888877777666 588
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-CCc--EEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRT--IKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (538)
+||+.++.... ...+.. .....++++||+.++..+. +|. |+++|+.+++... +..+.......+|+ ++
T Consensus 276 ~~d~~~g~~~~----lt~~~~--~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~ 348 (433)
T PRK04922 276 VMDLGSRQLTR----LTNHFG--IDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGK 348 (433)
T ss_pred EEECCCCCeEE----CccCCC--CccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCC
Confidence 99987654221 111111 1123478999998877664 444 7777877765433 22233444567888 45
Q ss_pred EEEEEecCC---cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC---CcEEEEeCC-cceeeeccccce
Q 009274 394 VLYSGSRDG---TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRND-KFMKSMQTHKGS 466 (538)
Q Consensus 394 ~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~~h~~~ 466 (538)
.++..+.++ .|.+||+.+++.. .+.... ... ...|+|||++++..+.+ +.+.+++.. .....+..+.+.
T Consensus 349 ~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~--~~~-~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~ 424 (433)
T PRK04922 349 KIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGS--LDE-SPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLVSADGE 424 (433)
T ss_pred EEEEEECCCCceeEEEEECCCCCeE-ECCCCC--CCC-CceECCCCCEEEEEEecCCceEEEEEECCCCceEEcccCCCC
Confidence 666654433 6999999887754 333221 112 25899999988876653 356667753 334444434333
Q ss_pred EE
Q 009274 467 VF 468 (538)
Q Consensus 467 v~ 468 (538)
+.
T Consensus 425 ~~ 426 (433)
T PRK04922 425 VR 426 (433)
T ss_pred CC
Confidence 33
No 403
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.15 E-value=6.1e-08 Score=89.67 Aligned_cols=219 Identities=12% Similarity=0.095 Sum_probs=142.3
Q ss_pred CCCcEEEEeCCCCceEEEEecCC--cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEE
Q 009274 270 FDKSIHVWSLKDFSHVHTFKGHD--HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHA 347 (538)
Q Consensus 270 ~dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (538)
.+|+|..||..+|+.+....... ....+... ++++ .+++++.++.+..||..+++............. .
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~-~~~~-~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~-------~ 71 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATAV-PDGG-RVYVASGDGNLYALDAKTGKVLWRFDLPGPISG-------A 71 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEETEE-EETT-EEEEEETTSEEEEEETTTSEEEEEEECSSCGGS-------G
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccceEE-EeCC-EEEEEcCCCEEEEEECCCCCEEEEeeccccccc-------e
Confidence 37899999999999999886411 22221122 2234 556668999999999988764433333111111 1
Q ss_pred EeecCCEEEEeeCCCcEEEEECCCCceeEEe-cCCC-----CCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecC
Q 009274 348 LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGHK-----SAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (538)
Q Consensus 348 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~h~-----~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 421 (538)
...++..+++++.++.++.+|..+|+.++.. .... .......+.++.++.+..++.|..+|+++|+.+......
T Consensus 72 ~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~ 151 (238)
T PF13360_consen 72 PVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVG 151 (238)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESS
T ss_pred eeecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecC
Confidence 2344667777788899999999999999984 3221 122334445889999999999999999999998888764
Q ss_pred CCCce---------EEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccccceEEE-EEeCCCEEEEEeCCCeEEEEec
Q 009274 422 SSGAV---------SSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFA-VFLEGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 422 ~~~~~---------~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~-~~~~~~~l~sgs~dg~v~iwd~ 491 (538)
..... ... ....++ .++.++.++.+..+|..+....+......... ...++..|+.++.++.+..||+
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~ 229 (238)
T PF13360_consen 152 EPRGSSPISSFSDINGS-PVISDG-RVYVSSGDGRVVAVDLATGEKLWSKPISGIYSLPSVDGGTLYVTSSDGRLYALDL 229 (238)
T ss_dssp TT-SS--EEEETTEEEE-EECCTT-EEEEECCTSSEEEEETTTTEEEEEECSS-ECECEECCCTEEEEEETTTEEEEEET
T ss_pred CCCCCcceeeecccccc-eEEECC-EEEEEcCCCeEEEEECCCCCEEEEecCCCccCCceeeCCEEEEEeCCCEEEEEEC
Confidence 32211 111 222234 77777778764444866543323322333444 4558888888889999999999
Q ss_pred CCCeeEee
Q 009274 492 AGDEFEED 499 (538)
Q Consensus 492 ~~~~~~~~ 499 (538)
++++..+.
T Consensus 230 ~tG~~~W~ 237 (238)
T PF13360_consen 230 KTGKVVWQ 237 (238)
T ss_dssp TTTEEEEE
T ss_pred CCCCEEeE
Confidence 99987653
No 404
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.15 E-value=3.8e-11 Score=119.08 Aligned_cols=134 Identities=16% Similarity=0.195 Sum_probs=75.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++...... ........||+.|||||++ .| ...++.++|||||||++|||++|+
T Consensus 139 ~~~~kL~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~ 203 (372)
T cd07853 139 NCVLKICDFGLARVEEPDE-SKHMTQEVVTQYYRAPEIL------MG--------SRHYTSAVDIWSVGCIFAELLGRRI 203 (372)
T ss_pred CCCEEeccccceeecccCc-cccCCCCCcCCCcCCHHHH------cC--------CCCCCcHHHHHhHHHHHHHHHcCCC
Confidence 3567888 5565544332 1224457899999999998 33 234678999999999999999999
Q ss_pred ccchhhhhhee-ecc-ccccCcchhhc-chhhHHHHHHHHHHH---------hhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIR-CVS-TKASDDNIACL-GMYMAWMEKVTYLLE---------NKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.+..+.... .+. ...... ...+ .........+...+. .........+.+++.+||..+|.+||++
T Consensus 204 pf~~~~~~~~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 282 (372)
T cd07853 204 LFQAQSPIQQLDLITDLLGTPS-LEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISA 282 (372)
T ss_pred CCCCCCHHHHHHHHHHHcCCCC-HHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCH
Confidence 99875443111 000 000000 0000 000000000000000 0001112347789999999999999998
Q ss_pred hhHHH
Q 009274 156 TNVWK 160 (538)
Q Consensus 156 ~~~~~ 160 (538)
.++.+
T Consensus 283 ~e~l~ 287 (372)
T cd07853 283 ADALA 287 (372)
T ss_pred HHHhc
Confidence 87654
No 405
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=3.3e-11 Score=110.46 Aligned_cols=130 Identities=18% Similarity=0.235 Sum_probs=79.4
Q ss_pred eec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccch
Q 009274 15 KVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (538)
Q Consensus 15 ~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~ 91 (538)
|+. ||||-....+..-++|+.+-|-+|.|||++ .. ...|+.+.||||+||||.|||+|+ =|.+
T Consensus 165 KI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPEll------l~--------~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 165 KICDFGLARYLDKFFEDGFMTEYVATRWYRAPELL------LN--------SSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred EeccccceeeccccCcccchhcceeeeeecCHHHH------hc--------cccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 777 999999754455568999999999999998 11 256889999999999999999999 6666
Q ss_pred hhhh----heee-ccccccCcchhhcchhhHHHHHHHHHH---Hh----hhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 92 ELID----YIRC-VSTKASDDNIACLGMYMAWMEKVTYLL---EN----KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 92 ~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
...- .|.. +-++.... +.... ....+..+...+ .. ..+...+..-+++.++|.++|.+|+++++..
T Consensus 231 ~d~v~Ql~lI~~~lGtP~~e~-l~~i~-s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 231 KDYVHQLQLILELLGTPSEED-LQKIR-SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred CchHHHHHHHHHhcCCCCHHH-HHHhc-cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 3222 1111 00000000 00000 000011111111 00 1112223356788999999999999988765
Q ss_pred H
Q 009274 160 K 160 (538)
Q Consensus 160 ~ 160 (538)
.
T Consensus 309 ~ 309 (359)
T KOG0660|consen 309 A 309 (359)
T ss_pred c
Confidence 4
No 406
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.14 E-value=8.9e-09 Score=93.05 Aligned_cols=241 Identities=15% Similarity=0.272 Sum_probs=152.6
Q ss_pred CCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-----eEEEEecCC------------cCeEEEEEecCC-CCEEEEE
Q 009274 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----HVHTFKGHD------------HKVMAVVYVDED-QPLCISG 311 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~h~------------~~v~~l~~~~~~-~~~l~s~ 311 (538)
.+-|.++.|. |++|+||..+|.|.++.-+... ....++.|. ..|..+.|.+++ ...++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4678899998 9999999999999999643222 233444454 468889998654 4567778
Q ss_pred cCCCcEEEEEccCCCCCc---------------c--eee---------------ecccCCceeeeEEEEeecCCEEEEee
Q 009274 312 DSGGGIFVWSFSFPLGHE---------------P--LKK---------------WNEEKDWRYSGIHALTTSGRYLYTGS 359 (538)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~---------------~--~~~---------------~~~~~~~~~~~~~~~~~~~~~l~sg~ 359 (538)
+.|.+|++|.+....... . +.. +...+..+.. ..++..|+..++++
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiN-SIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHIN-SISVNSDKETFLSA- 182 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEee-eeeecCccceEeec-
Confidence 899999999886432221 0 000 0011111111 12444455566665
Q ss_pred CCCcEEEEECCCCce---eEEecCCC-----CCeEEEEEe---CCEEEEEecCCcEEEEECCCCcee----EEEecCCCC
Q 009274 360 GDRTIKAWSLLDGTL---SCTMSGHK-----SAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLL----TVLEEDSSG 424 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~---~~~~~~h~-----~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~ 424 (538)
+|=.|.+|++.--.. +..++.+. .-|++-.|+ -+.++-.+..|+|++-|++...+- ..+.....+
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 567899999863221 22233332 357788888 458888888999999999954321 111111000
Q ss_pred ----------ceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccc------------eE---EEEEe--CC
Q 009274 425 ----------AVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKG------------SV---FAVFL--EG 474 (538)
Q Consensus 425 ----------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~------------~v---~~~~~--~~ 474 (538)
...+-+.|+++|+++++-+. -+|++||.. +++.+++.|.. .| ..++| ++
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 01122689999999988654 489999953 46666666642 22 23456 55
Q ss_pred CEEEEEeCCCeEEEEecCCCe
Q 009274 475 KWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~~ 495 (538)
.+++||+....++++++..+.
T Consensus 342 ~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 342 SYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred ceEecccccceEEEecCCCCc
Confidence 599999999999999976543
No 407
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=2e-11 Score=118.12 Aligned_cols=113 Identities=18% Similarity=0.220 Sum_probs=77.3
Q ss_pred eeeeeecccc--ccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVGCVG--SRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.++-|++.+| +.+.+.. +|+|||.|||||+| .-. -.|.|+-+.||||||+++.||.--+
T Consensus 162 ~g~VKLaDFGSAsi~~PAn------sFvGTPywMAPEVI------LAM------DEGqYdgkvDvWSLGITCIELAERkP 223 (948)
T KOG0577|consen 162 PGLVKLADFGSASIMAPAN------SFVGTPYWMAPEVI------LAM------DEGQYDGKVDVWSLGITCIELAERKP 223 (948)
T ss_pred CCeeeeccccchhhcCchh------cccCCccccchhHh------eec------cccccCCccceeeccchhhhhhhcCC
Confidence 4677888554 4555442 69999999999999 221 1478999999999999999999988
Q ss_pred ccchh-hhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKE-LIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|+-.. ....+. +|.-...+....+..+..+. .++..||.+-|..||+++++.+.
T Consensus 224 PlFnMNAMSALY---------HIAQNesPtLqs~eWS~~F~-----------~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 224 PLFNMNAMSALY---------HIAQNESPTLQSNEWSDYFR-----------NFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CccCchHHHHHH---------HHHhcCCCCCCCchhHHHHH-----------HHHHHHHhhCcccCCcHHHHhhc
Confidence 64433 222222 01122222222344444444 48888999999999999987764
No 408
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.14 E-value=1.6e-11 Score=121.25 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=51.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+...... .....+||+.|||||++.... ....++.++|+|||||+||+|++|+ |
T Consensus 179 ~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-----------~~~~~~~~~DiwSlG~ilyell~G~~P 246 (370)
T cd05621 179 GHLKLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLFEMLVGDTP 246 (370)
T ss_pred CCEEEEecccceecccCCce-ecccCCCCcccCCHHHHhccC-----------CCCCCCcccCEEeehHHHHHHHhCCCC
Confidence 567888 566665433211 123678999999999992111 1134778999999999999999999 9
Q ss_pred cchhhhh
Q 009274 89 FTKELID 95 (538)
Q Consensus 89 f~~~~~~ 95 (538)
|.+.+..
T Consensus 247 f~~~~~~ 253 (370)
T cd05621 247 FYADSLV 253 (370)
T ss_pred CCCCCHH
Confidence 9876443
No 409
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.14 E-value=1.4e-11 Score=116.92 Aligned_cols=112 Identities=19% Similarity=0.296 Sum_probs=72.5
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+.+ +++.+...... .....|++.|||||++ .+ ..++.++|+|||||++|+|+||+ |
T Consensus 138 ~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06642 138 GDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVI------KQ---------SAYDFKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEccccccccccCcchh--hhcccCcccccCHHHh------Cc---------CCCchhhhHHHHHHHHHHHHhCCCC
Confidence 4577874 45555433221 2346899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+....... . ... .+.. ......++.+++.+||..+|++||++.++..
T Consensus 201 ~~~~~~~~~~~~~---~-----~~~-~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 201 NSDLHPMRVLFLI---P-----KNS-PPTL-----------EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CcccchhhHHhhh---h-----cCC-CCCC-----------CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8754333111000 0 000 0000 0011223778999999999999999888765
No 410
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.14 E-value=1.7e-11 Score=116.50 Aligned_cols=117 Identities=19% Similarity=0.341 Sum_probs=73.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+.+.. .+..+||+.|+|||++ .+ ..++.++|+|||||++|+|++|+
T Consensus 131 ~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~~l~~l~~g~~ 191 (279)
T cd06619 131 RGQVKLCDFGVSTQLVNSI----AKTYVGTNAYMAPERI------SG---------EQYGIHSDVWSLGISFMELALGRF 191 (279)
T ss_pred CCCEEEeeCCcceeccccc----ccCCCCChhhcCceee------cC---------CCCCCcchHHHHHHHHHHHHhCCC
Confidence 3457888 4555544332 3457999999999998 33 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh--cCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF--GSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||........ .. ................. ......+.+++.+||..+|.+||+..++.+
T Consensus 192 pf~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 192 PYPQIQKNQG-------------SL-MPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred Cchhhccccc-------------cc-chHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 9976322200 00 00000000000000000 112234788999999999999999877654
No 411
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.14 E-value=1.7e-11 Score=116.43 Aligned_cols=113 Identities=18% Similarity=0.268 Sum_probs=73.6
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ +++.+..... ......|+..|+|||++ .+ ..++.++|+|||||++|+|+||. |
T Consensus 138 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~------~~---------~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06640 138 GDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVI------QQ---------SAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CCEEEcccccceeccCCcc--ccccccCcccccCHhHh------cc---------CCCccHHHHHHHHHHHHHHHHCCCC
Confidence 3467774 4555543322 13346799999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|....+....... . ... ++...+ ..+ .++.+++.+||..+|.+||+..++..+
T Consensus 201 ~~~~~~~~~~~~~---~-----~~~-~~~~~~---~~~--------~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 201 NSDMHPMRVLFLI---P-----KNN-PPTLTG---EFS--------KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCcChHhHhhhh---h-----cCC-CCCCch---hhh--------HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 9875444211000 0 000 000001 011 237789999999999999998887653
No 412
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.14 E-value=3.2e-10 Score=121.71 Aligned_cols=224 Identities=13% Similarity=0.183 Sum_probs=155.5
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
.+-..|.++.-+|... +.++|+.||.+++|....+......+.... ....-..++.+|+.+..+..||.+.+|.+
T Consensus 2206 ~~v~~v~r~~sHp~~~-~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~----s~vtr~~f~~qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDP-YYLTGSQDGSVRMFEWGHGQQVVCFRTAGN----SRVTRSRFNHQGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred cccCceeeecCCCCCc-eEEecCCCceEEEEeccCCCeEEEeeccCc----chhhhhhhcccCCceeeeccCCceeeccc
Confidence 3445677777677555 558999999999999887655444333222 12223467788999999999999999998
Q ss_pred CCCceeEEecCCCCCeEEEEEeCCEEEEEe---cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVCNGVLYSGS---RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
. .++....+.|.....++.|-+..+++++ .++.+.+||..-.....-+...|.+.. +++++-|..+.|++|+.+|
T Consensus 2281 ~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~ga-T~l~~~P~~qllisggr~G 2358 (2439)
T KOG1064|consen 2281 S-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGA-TVLAYAPKHQLLISGGRKG 2358 (2439)
T ss_pred C-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCc-eEEEEcCcceEEEecCCcC
Confidence 6 6777778889999999999887777764 578899999754322222222233333 3479999999999999999
Q ss_pred cEEEEeCCc--ceeeeccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCc-----eEEEEEeC
Q 009274 447 SIKVWRNDK--FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSV-----ITALLYWQ 519 (538)
Q Consensus 447 ~i~iwd~~~--~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 519 (538)
.|++||.++ ..+.++. +. ...++++|+..|.++||++.............. +... ...-.-..
T Consensus 2359 ~v~l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~a--k~gfFr~~g~Q~~v~~~ 2428 (2439)
T KOG1064|consen 2359 EVCLFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHA--KQGFFRNIGMQINVGQC 2428 (2439)
T ss_pred cEEEeehHHHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccchhhcCchhhc--ccchhhhcCceeeeccC
Confidence 999999764 3333333 33 677999999999999999988755443333221 1111 11111236
Q ss_pred CEEEEEECCCe
Q 009274 520 GKLFVGCADRT 530 (538)
Q Consensus 520 ~~l~sg~~dg~ 530 (538)
++|++|+.||+
T Consensus 2429 nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2429 NRIFSCGADGT 2439 (2439)
T ss_pred ceEEEecCCCC
Confidence 78999999874
No 413
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.14 E-value=1.7e-11 Score=120.97 Aligned_cols=47 Identities=23% Similarity=0.403 Sum_probs=40.8
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
..+||+.|||||++ .+ ..++.++|||||||+||||+||+ ||...++.
T Consensus 195 ~~~gt~~Y~APE~~------~~---------~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~ 242 (360)
T cd05627 195 STVGTPDYIAPEVF------MQ---------TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242 (360)
T ss_pred ccCCCccccCHHHH------cC---------CCCCCcceeccccceeeecccCCCCCCCCCHH
Confidence 46899999999998 43 56788999999999999999999 99876544
No 414
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=8.6e-12 Score=115.95 Aligned_cols=91 Identities=20% Similarity=0.217 Sum_probs=64.8
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchh
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (538)
...++||-+|+|||++ +| ...+.+.|-|+||+.|||||.|. ||-+.+....+. |++
T Consensus 292 SnSFVGThEYlAPEvI------~G---------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~--------NIv 348 (459)
T KOG0610|consen 292 SNSFVGTHEYLAPEVI------RG---------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR--------NIV 348 (459)
T ss_pred ccccccccccccceee------ec---------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH--------HHh
Confidence 3369999999999999 76 55678999999999999999999 999976553331 111
Q ss_pred hcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
...+ .. |.. +.....+.++|++.|.++|.+|....
T Consensus 349 ~~~l-~F-----p~~-----~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 349 GQPL-KF-----PEE-----PEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred cCCC-cC-----CCC-----CcchhHHHHHHHHHhccChhhhhccc
Confidence 1100 00 000 01122378899999999999998843
No 415
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.13 E-value=2.3e-08 Score=100.62 Aligned_cols=212 Identities=9% Similarity=0.101 Sum_probs=126.0
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC--CcEEEEEccCCCCCcceeeecccCCceeeeEEEEe
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (538)
..|.++|. ++.....+..+...+.+.+|+|++..++++...+ ..|.+||+.++... .+..... ......++
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g-----~~~~~~~S 248 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKG-----SNSAPAWS 248 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCC-----CccceEEC
Confidence 35777776 3455555667788899999999887665555433 45999999866432 1211111 11245899
Q ss_pred ecCCEEE-EeeCCCcEEEEE--CCCCceeEEecCCCCCeEEEEEe--CCEEEEEe-cCCcEEEEEC--CCCceeEEEecC
Q 009274 350 TSGRYLY-TGSGDRTIKAWS--LLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS-RDGTIRLWSL--SDHSLLTVLEED 421 (538)
Q Consensus 350 ~~~~~l~-sg~~dg~i~iwd--~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~--~~~~~~~~~~~~ 421 (538)
|||+.|+ +.+.+|...+|. +.++. ...+..+........|+ +..++..+ .++...+|.+ .+++.. .+...
T Consensus 249 PDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~ 326 (427)
T PRK02889 249 PDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFT 326 (427)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecC
Confidence 9999776 567777766654 44444 44555555556778898 44565544 3566666654 444432 22221
Q ss_pred CCCceEEEEEEcCCCCEEEEEeCCC---cEEEEeCCc-ceeeeccc-cceEEEEEeCCCEEEEEeCCC---eEEEEecCC
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHESG---SIKVWRNDK-FMKSMQTH-KGSVFAVFLEGKWLFTGGWDK---TVSVQELAG 493 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~-~~~~~~~h-~~~v~~~~~~~~~l~sgs~dg---~v~iwd~~~ 493 (538)
... .....|+|+|++++..+.++ .|.+||... ....+..+ ...-.++++||+.|+.++.++ .+.+.++.+
T Consensus 327 -g~~-~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g 404 (427)
T PRK02889 327 -GSY-NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG 404 (427)
T ss_pred -CCC-cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEECCC
Confidence 111 12258999999998777654 589999543 22333221 122234455999888877654 355556644
Q ss_pred C
Q 009274 494 D 494 (538)
Q Consensus 494 ~ 494 (538)
.
T Consensus 405 ~ 405 (427)
T PRK02889 405 R 405 (427)
T ss_pred C
Confidence 3
No 416
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=1.5e-11 Score=113.95 Aligned_cols=52 Identities=23% Similarity=0.432 Sum_probs=44.5
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhhee
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIR 98 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~ 98 (538)
++++||||.|||||++ +-..|+...|-||+||+|||||.|+ ||++++...+.
T Consensus 507 TkTFCGTPdYiAPEIi---------------~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF 559 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEII---------------AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF 559 (683)
T ss_pred eeeecCCCcccccceE---------------EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 6789999999999998 2246778899999999999999999 99998666333
No 417
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.13 E-value=5.2e-11 Score=116.36 Aligned_cols=120 Identities=14% Similarity=0.213 Sum_probs=77.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.+.............+++.|||||++ .+ ..++.++|||||||+||+|++ |.
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 235 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGVLLWEIFTLGGS 235 (334)
T ss_pred CcEEECCcccceecccccccccccCCCcCceEcCHHHh------cc---------CCcCchhhhHHHHHHHHHHHhcCCC
Confidence 457887 566655443221112234556789999998 33 457789999999999999999 77
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+... . .+ .........+.+++.+|+..+|.+||+..++...+.++.
T Consensus 236 p~~~~~~~~~~~~~~~~-~----------------~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 236 PYPGIPVEELFKLLKEG-H----------------RM----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CCCCCCHHHHHHHHHcC-C----------------CC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 99765433111 00000 0 00 000011224778999999999999999999999888765
Q ss_pred c
Q 009274 167 I 167 (538)
Q Consensus 167 ~ 167 (538)
.
T Consensus 295 ~ 295 (334)
T cd05100 295 T 295 (334)
T ss_pred h
Confidence 3
No 418
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.13 E-value=1.6e-11 Score=115.90 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=70.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
-.|+. |+++.+..... ......||+.|||||++... ....++.++|+|||||++|+|++|. ||
T Consensus 144 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------------~~~~~~~~~DvwSlG~il~~l~~~~~p~ 209 (267)
T cd06645 144 HVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVE------------RKGGYNQLCDIWAVGITAIELAELQPPM 209 (267)
T ss_pred CEEECcceeeeEccCccc--ccccccCcccccChhhhccc------------cCCCCCchhhhHHHHHHHHHHhcCCCCc
Confidence 35666 55555443221 13457899999999998111 1245778999999999999999999 88
Q ss_pred chhhhhh-eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
....+.. +..... .. .. +..... . ......+.+++.+||+.+|++||+..++..
T Consensus 210 ~~~~~~~~~~~~~~-~~-----~~--~~~~~~-~--------~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 210 FDLHPMRALFLMTK-SN-----FQ--PPKLKD-K--------MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccccchhhHHhhhc-cC-----CC--CCcccc-c--------CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 6543221 110000 00 00 000000 0 001123678999999999999999876543
No 419
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.13 E-value=4.5e-11 Score=113.06 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=64.7
Q ss_pred cccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-ccchhhhhheeeccccccCcchhhcc
Q 009274 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLG 113 (538)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (538)
..++.|||||++ .+ ..++.++|||||||++|+|++ |. ||.........
T Consensus 172 ~~~~~y~apE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~--------------- 221 (270)
T cd05047 172 RLPVRWMAIESL------NY---------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--------------- 221 (270)
T ss_pred CCccccCChHHH------cc---------CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH---------------
Confidence 346789999998 22 457789999999999999997 88 99764332111
Q ss_pred hhhHHHHHHHHHHH-hhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 114 MYMAWMEKVTYLLE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
...+.... .........+.+++.+|+..+|.+||+..++...+.+++
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 222 ------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ------HHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00000000 000011224778999999999999999999988877654
No 420
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.13 E-value=2e-11 Score=121.32 Aligned_cols=121 Identities=12% Similarity=0.134 Sum_probs=78.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
...+|+. |+++.+.............|++.|||||++ .+ ..++.++|||||||+||||++ |.
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslGvil~e~l~~g~ 339 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESI------FN---------NLYTTLSDVWSFGILLWEIFTLGG 339 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHh------cC---------CCCCcHhHHHHHHHHHHHHHHcCC
Confidence 3568887 666654433221112346789999999998 33 456789999999999999998 77
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||......... . ..+..-..... ......+.+++.+|+..+|.+||...++.+.+.++
T Consensus 340 ~P~~~~~~~~~~-------------~-------~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 340 TPYPELPMNEQF-------------Y-------NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCCCCCchHHH-------------H-------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 98753222000 0 00000000000 01123478899999999999999999999888765
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 400 ~ 400 (401)
T cd05107 400 L 400 (401)
T ss_pred h
Confidence 4
No 421
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.13 E-value=1.8e-11 Score=114.93 Aligned_cols=116 Identities=16% Similarity=0.245 Sum_probs=74.2
Q ss_pred eeeeec--cccccccccchhhhhh-hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLS-DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
...|+. |+++.+.......... ...|+..|+|||++ .+ ..++.++|||||||++|+|++ |+
T Consensus 134 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~------~~---------~~~~~~~Di~slG~~l~el~t~g~ 198 (257)
T cd05040 134 DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL------RT---------RTFSHASDVWMFGVTLWEMFTYGE 198 (257)
T ss_pred CEEEeccccccccccccccceecccCCCCCceecCHHHh------cc---------cCcCchhhhHHHHHHHHHHHhCCC
Confidence 456777 4566554432211111 35788999999998 33 457789999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||...+...+. .+.. .. ... .........+.+++.+|+..+|.+||+..++.+.+
T Consensus 199 ~p~~~~~~~~~~~~~~~-~~------~~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 199 EPWAGLSGSQILKKIDK-EG------ERL-------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCCCCCHHHHHHHHHh-cC------CcC-------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 99654333111 0000 00 000 00001123477899999999999999999887654
No 422
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.13 E-value=5.5e-11 Score=113.06 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=78.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.............+++.|||||.+ .+ ..++.++|+|||||++|||++ |+
T Consensus 145 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~ 209 (279)
T cd05057 145 PQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI------LH---------RIYTHKSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred CCeEEECCCcccccccCcccceecCCCcccccccCHHHh------hc---------CCcCchhhHHHHHHHHHHHhcCCC
Confidence 3467888 556666544332212234456789999988 22 557789999999999999999 99
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+...... .. ...........+.+++.+|+..+|+.||+..++.+.+.++.
T Consensus 210 ~p~~~~~~~~~~~~~~~--------~~------------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 210 KPYEGIPAVEIPDLLEK--------GE------------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCCCCCHHHHHHHHhC--------CC------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 9987544311100000 00 00000112234678899999999999999999988888765
No 423
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.13 E-value=1.9e-11 Score=115.38 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=72.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++++..... ......|++.|||||++ .+ .....++.++|+|||||++|+|++|+ |
T Consensus 143 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~------~~------~~~~~~~~~~Dvws~G~il~el~~g~~p 208 (267)
T cd06646 143 GDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVA------AV------EKNGGYNQLCDIWAVGITAIELAELQPP 208 (267)
T ss_pred CCEEECcCccceeeccccc--ccCccccCccccCHhHc------cc------ccCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence 457887 55565543211 12357899999999998 21 01234567899999999999999999 9
Q ss_pred cchhhhhh-eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+.. ...+. +. ...+ +.+.. . ......+.+++.+||..+|++||+..++.+
T Consensus 209 ~~~~~~~~~~~~~~-~~------~~~~-~~~~~-~--------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 209 MFDLHPMRALFLMS-KS------NFQP-PKLKD-K--------TKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred ccccchhhhheeee-cC------CCCC-CCCcc-c--------cccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 86543331 11000 00 0000 00000 0 011124778999999999999999877654
No 424
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.13 E-value=3.4e-09 Score=108.86 Aligned_cols=192 Identities=19% Similarity=0.288 Sum_probs=141.0
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeE-EEE-E-ecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVM-AVV-Y-VDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~-~-~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
+.|....+. ...++.++.++.+.+||...+.....+........ +.. + ....+-++++|+.-+.|.+|+......
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~ 167 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK 167 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCC
Confidence 444443333 88899999999999999988776666553322211 111 1 122556788999999999999872222
Q ss_pred CcceeeecccCCceeeeEEE--EeecCCEEEEeeCCCcEEEEECCCCceeE-EecCCCCCeEEEEEeCCEEEEEecCCcE
Q 009274 328 HEPLKKWNEEKDWRYSGIHA--LTTSGRYLYTGSGDRTIKAWSLLDGTLSC-TMSGHKSAVSTLAVCNGVLYSGSRDGTI 404 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~l~s~s~dg~i 404 (538)
+. ....|.+ .+.. ++.||+++++.|+|.++++|++.+.+... ..-+|+..|..+.+.++.+++++.|.+.
T Consensus 168 --p~-~l~GHeG----~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctc 240 (967)
T KOG0974|consen 168 --PI-RLKGHEG----SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTC 240 (967)
T ss_pred --cc-eecccCC----ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccceeEEeccceEE
Confidence 21 2233333 2333 44589999999999999999999988766 6678999999999998899999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 453 (538)
++|+.. ++.+..+..|....+.. +..+++...+++++.|+.+++||.
T Consensus 241 rvW~~~-~~~l~~y~~h~g~~iw~-~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 241 RVWGVN-GTQLEVYDEHSGKGIWK-IAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred EEEecc-cceehhhhhhhhcceeE-EEEcCCceEEEeeccCcchhhhhh
Confidence 999764 44555676665555555 588888999999999999999983
No 425
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.13 E-value=5.5e-11 Score=111.56 Aligned_cols=117 Identities=14% Similarity=0.133 Sum_probs=74.5
Q ss_pred eeeeec--cccccccccchhhhhh--hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLS--DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
...|+. |+++.+...... ... ...++..|+|||.+ .+ ..++.++||||||+++|+|++ |
T Consensus 132 ~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 132 HQAKISDFGMSRALGAGSDY-YRATTAGRWPLKWYAPECI------NY---------GKFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred CcEEeccccccceeecCCcc-cccccCccccccccCHHHh------cC---------CCCCccchHHHHHHHHHHHHcCC
Confidence 346777 556655433221 111 12345789999998 33 567889999999999999998 8
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
. ||.......+. .+. . .. ...........+.+++.+|+..+|++||+..++...+..
T Consensus 196 ~~p~~~~~~~~~~~~~~---~------~~------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 196 AKPYGEMKGAEVIAMLE---S------GE------------RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCcccCCHHHHHHHHH---c------CC------------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 8 99765333111 000 0 00 000011122347789999999999999999998887665
Q ss_pred h
Q 009274 165 L 165 (538)
Q Consensus 165 l 165 (538)
.
T Consensus 255 ~ 255 (257)
T cd05060 255 D 255 (257)
T ss_pred c
Confidence 3
No 426
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.13 E-value=5.8e-11 Score=111.70 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=74.3
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
..|+. |+++.+.+.. ....+..+++.|+|||++ .+ ..++.++||||||+++|+|++ |+ |
T Consensus 142 ~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~PE~~------~~---------~~~~~~~DiwslG~~l~~l~~~g~~p 204 (261)
T cd05148 142 VCKVADFGLARLIKEDV--YLSSDKKIPYKWTAPEAA------SH---------GTFSTKSDVWSFGILLYEMFTYGQVP 204 (261)
T ss_pred eEEEccccchhhcCCcc--ccccCCCCceEecCHHHH------cc---------CCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 56777 4555554331 123355678899999998 22 456789999999999999999 78 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
|.......+... ... . ............+.+++.+||..+|.+||+..++.+.+..
T Consensus 205 ~~~~~~~~~~~~----------~~~------~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 205 YPGMNNHEVYDQ----------ITA------G----YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCcCCHHHHHHH----------HHh------C----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 976543311100 000 0 0000001122347789999999999999999998876643
No 427
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.12 E-value=4.1e-11 Score=112.44 Aligned_cols=94 Identities=18% Similarity=0.327 Sum_probs=64.1
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchh
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (538)
.....|++.|||||++ .+ ..++.++|+||||+++|+|++|+ ||.......+.
T Consensus 159 ~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~------------ 211 (257)
T cd08223 159 ASTLIGTPYYMSPELF------SN---------KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV------------ 211 (257)
T ss_pred cccccCCcCccChhHh------cC---------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH------------
Confidence 4467899999999998 33 56778999999999999999999 99865333111
Q ss_pred hcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
. .......+..+ ......+.+++.+|++.+|.+||++.++.+
T Consensus 212 -~---~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 212 -Y---RIIEGKLPPMP----KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -H---HHHhcCCCCCc----cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00000000000 011224778999999999999999777654
No 428
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.12 E-value=4.4e-11 Score=112.58 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=75.8
Q ss_pred eeeeec--cccccccccchh--hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
+.+|+. |+++.+.+.... .......+++.|||||++ .+ ..++.++|||||||++|||++|.
T Consensus 135 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 135 FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL------QT---------QKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred CcEEECCccccccccCCcceeecccccCcCCccccChhHh------cc---------CccchHHHHHHHHHHHHHHHcCC
Confidence 457888 566655433210 001245678899999998 33 45678999999999999999964
Q ss_pred --ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 --QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 --pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+. ....+. ........+.+++.+||..+|.+||+..++...+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~---------~~~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 200 APPYPDVDSFDITVYLL---------QGRRLL------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred CCCCCCCCHHHHHHHHh---------cCCCCC------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 67654332111 000 000000 000112247789999999999999999999988777
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
++
T Consensus 259 ~~ 260 (262)
T cd05058 259 IF 260 (262)
T ss_pred Hh
Confidence 54
No 429
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=2.1e-11 Score=118.94 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=67.2
Q ss_pred hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh-heeeccccccCcchh
Q 009274 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIA 110 (538)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~ 110 (538)
-+|.|||.|||||+.+=+.-+ ...|++++||||||++|.||.-+. |-...++. +++.+.
T Consensus 188 DsFIGTPYWMAPEVvmCET~K----------D~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia--------- 248 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFK----------DQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA--------- 248 (1187)
T ss_pred ccccCCcccccchheeecccc----------CCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh---------
Confidence 369999999999987322111 267899999999999999999999 55554444 222111
Q ss_pred hcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
...++....+ ..+...+.+++.+||.++|..||+++++.+
T Consensus 249 KSePPTLlqP----------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 249 KSEPPTLLQP----------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hcCCCcccCc----------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1122211111 122234778999999999999999987765
No 430
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.12 E-value=5.3e-11 Score=112.82 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=71.0
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.++ ++...... .......||+.|||||++..... ....+++++|||||||+||+|++|. |
T Consensus 150 ~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slG~il~~l~~g~~p 217 (275)
T cd06608 150 AEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQ----------PDASYDARSDVWSLGITAIELADGKPP 217 (275)
T ss_pred CeEEECCCccceecccch--hhhcCccccccccCHhHhccccc----------ccCCccccccHHHhHHHHHHHHhCCCC
Confidence 44677744 44333221 11345789999999999822111 1245678999999999999999999 9
Q ss_pred cchhhhhh-eeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....... +..+. ......... +. .....+.+++.+||..+|++||+..++..
T Consensus 218 ~~~~~~~~~~~~~~----------~~~~~~~~~--~~-------~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 218 LCDMHPMRALFKIP----------RNPPPTLKS--PE-------NWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccccchHHHHHHhh----------ccCCCCCCc--hh-------hcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 97543221 11000 000000000 00 01123678999999999999999877654
No 431
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.12 E-value=2.6e-11 Score=117.16 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=73.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++....... ......||+.|+|||++ .+ ...++.++|||||||++|+|+||+ |
T Consensus 141 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~tg~~p 204 (309)
T cd07872 141 GELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVL------LG--------SSEYSTQIDMWGVGCIFFEMASGRPL 204 (309)
T ss_pred CCEEECccccceecCCCcc--ccccccccccccCCHHH------hC--------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 467888 44544332221 24457899999999998 32 235678999999999999999999 9
Q ss_pred cchhhhhheee--ccccccCcchhhcchhhHHHHHH-HHHH-------HhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 89 FTKELIDYIRC--VSTKASDDNIACLGMYMAWMEKV-TYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 89 f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|.+.+...... ...-.... -..+.......... ...+ ....+.....+.+++.+||..+|.+||++.++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~ 283 (309)
T cd07872 205 FPGSTVEDELHLIFRLLGTPT-EETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA 283 (309)
T ss_pred CCCCChHHHHHHHHHHhCCCC-HHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHH
Confidence 97654321110 00000000 00000000000000 0000 00001112346789999999999999998877
Q ss_pred HH
Q 009274 159 WK 160 (538)
Q Consensus 159 ~~ 160 (538)
.+
T Consensus 284 l~ 285 (309)
T cd07872 284 MK 285 (309)
T ss_pred hc
Confidence 65
No 432
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.12 E-value=9.4e-11 Score=113.09 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=80.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+.++||+ ||||.+.+.+=+ ...+-.==.-|.|||.+ ..++++.+||||||||+||||.| |+
T Consensus 339 ~~~vKIsDFGLAr~~~d~~Y~-~~~~~kfPIkWtAPEa~---------------~~~~FS~kSDVWSFGVlL~E~fT~G~ 402 (468)
T KOG0197|consen 339 DLVVKISDFGLARLIGDDEYT-ASEGGKFPIKWTAPEAL---------------NYGKFSSKSDVWSFGVLLWELFTYGR 402 (468)
T ss_pred CceEEEcccccccccCCCcee-ecCCCCCCceecCHHHH---------------hhCCcccccceeehhhhHHHHhccCC
Confidence 3589999 999977766532 12222223579999999 34678899999999999999999 88
Q ss_pred -ccchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|+.+.+.. ++..++ ++.. ++ +......++-++...|+..+|++||+-..+...+..+
T Consensus 403 ~py~~msn~ev~~~le-----------------~GyR--lp--~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 403 VPYPGMSNEEVLELLE-----------------RGYR--LP--RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCCCCHHHHHHHHh-----------------ccCc--CC--CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 99886444 111111 0000 00 1112334477788889999999999988777766655
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 462 ~ 462 (468)
T KOG0197|consen 462 F 462 (468)
T ss_pred h
Confidence 4
No 433
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.12 E-value=4e-11 Score=112.39 Aligned_cols=113 Identities=19% Similarity=0.251 Sum_probs=71.8
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+.++ ++........ ......++..|||||++ .+ ..++.++|+||||++||+|++ |+
T Consensus 137 ~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~s~G~~l~el~~~g~~ 200 (256)
T cd05114 137 GVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVF------NF---------SKYSSKSDVWSFGVLMWEVFTEGKM 200 (256)
T ss_pred CeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhc------cc---------CccchhhhhHHHHHHHHHHHcCCCC
Confidence 46788854 4544322211 12234567789999998 33 456789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. .+.. . ..+ .........+.+++.+|++.+|.+||++.++.+.
T Consensus 201 p~~~~~~~~~~~~i~~--~------~~~-------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 201 PFEKKSNYEVVEMISR--G------FRL-------------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred CCCCCCHHHHHHHHHC--C------CCC-------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99765433111 0000 0 000 0000112237789999999999999999887654
No 434
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.12 E-value=5e-11 Score=113.89 Aligned_cols=120 Identities=14% Similarity=0.202 Sum_probs=76.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++.+.............+++.|||||++ .+ ..++.++|+|||||++|||++ |.
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~------~~---------~~~~~~~DvwslG~~l~el~~~~~~ 220 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL------KD---------GVFTTSSDMWSFGVVLWEITSLAEQ 220 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHh------cc---------CCCChHhHHHHHHHHHHHHHhCCCC
Confidence 457887 455654433221112234568899999998 33 567889999999999999999 67
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+........ .+ .........+.+++.+||..+|.+||+..++.+.+....
T Consensus 221 p~~~~~~~~~~~~~~~~~----------------~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 221 PYQGLSNEQVLKFVMDGG----------------YL----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCHHHHHHHHHcCC----------------CC----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 997643331110000000 00 000112235888999999999999999999888777654
No 435
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.12 E-value=6.8e-11 Score=111.15 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=73.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++.....+.. ......+++.|+|||++ .+ ..++.++||||||+++|+|++ |+
T Consensus 139 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~pe~~------~~---------~~~~~~~Di~slG~~l~el~~~g~~ 202 (260)
T cd05067 139 LCCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAI------NY---------GTFTIKSDVWSFGILLTEIVTYGRI 202 (260)
T ss_pred CCEEEccCcceeecCCCCcc-cccCCcccccccCHHHh------cc---------CCcCcccchHHHHHHHHHHHhCCCC
Confidence 346776 445544422111 12245678899999998 33 556789999999999999999 89
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.+.....+. .+. . .... .........+.+++.+||..+|++||+..++...+.
T Consensus 203 p~~~~~~~~~~~~~~---~-----~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 203 PYPGMTNPEVIQNLE---R-----GYRM-------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCCChHHHHHHHH---c-----CCCC-------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 99765333111 000 0 0000 000011224788999999999999999988877654
No 436
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.12 E-value=6.1e-11 Score=113.84 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=65.0
Q ss_pred cccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-ccchhhhhheeeccccccCcchhhcchh
Q 009274 38 SNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGMY 115 (538)
Q Consensus 38 ~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (538)
+..|||||++ .+ ..++.++|||||||++|+|++ |. ||.......+.
T Consensus 181 ~~~y~aPE~~------~~---------~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~----------------- 228 (297)
T cd05089 181 PVRWMAIESL------NY---------SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELY----------------- 228 (297)
T ss_pred CccccCchhh------cc---------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----------------
Confidence 5679999998 32 457789999999999999998 98 99765443111
Q ss_pred hHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 116 MAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 116 ~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
........... ......+.+++.+||..+|.+||+..++.+.+..++.
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 229 ----EKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred ----HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00000000000 0112347789999999999999999999887777653
No 437
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.12 E-value=4.2e-11 Score=111.95 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=70.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++...+...........+++.|||||++ .+ +.++.++|||||||++|+|++ |.
T Consensus 131 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~e~~~~~~~ 195 (252)
T cd05084 131 NVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEAL------NY---------GRYSSESDVWSFGILLWEAFSLGAV 195 (252)
T ss_pred CcEEECccccCcccccccccccCCCCCCceeecCchhh------cC---------CCCChHHHHHHHHHHHHHHHhCCCC
Confidence 457887 455554432111001111235679999998 33 567889999999999999998 77
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||......... .+. . ..... ........+.+++.+||..+|++||+..++.+.+
T Consensus 196 p~~~~~~~~~~~~~~---~------~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 250 (252)
T cd05084 196 PYANLSNQQTREAIE---Q------GVRLP------------CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250 (252)
T ss_pred CccccCHHHHHHHHH---c------CCCCC------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 88754333111 000 0 00000 0001122477899999999999999998887654
No 438
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.12 E-value=5.2e-11 Score=113.56 Aligned_cols=120 Identities=23% Similarity=0.311 Sum_probs=72.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+.. +++...... ....+||+.|||||++ .+ ..++.++|||||||++|+|+||+ |
T Consensus 141 ~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~tg~~p 201 (284)
T cd06620 141 GQIKLCDFGVSGELINSI----ADTFVGTSTYMSPERI------QG---------GKYTVKSDVWSLGISIIELALGKFP 201 (284)
T ss_pred CcEEEccCCcccchhhhc----cCccccCcccCCHHHH------cc---------CCCCccchHHHHHHHHHHHHhCCCC
Confidence 3467774 444443221 2247899999999998 33 46778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC--ccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS--EFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ... .............. ....... ....+.+++.+||..+|++||++.++.+
T Consensus 202 ~~~~~~~~~~------~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~ 265 (284)
T cd06620 202 FAFSNIDDDG------QDD---PMGILDLLQQIVQE-PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCA 265 (284)
T ss_pred Ccccchhhhh------hhh---hhHHHHHHHHHhhc-cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 9864332000 000 00000000000000 0000000 1224788999999999999999987765
No 439
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.12 E-value=7.2e-11 Score=110.96 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=74.4
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+.+ +++.+...... ......++..|+|||++ .+ ..++.++|+|||||++|+|+| |+
T Consensus 139 ~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~------~~---------~~~~~~~Di~slG~~l~~l~t~g~~ 202 (260)
T cd05073 139 LVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAI------NF---------GSFTIKSDVWSFGILLMEIVTYGRI 202 (260)
T ss_pred CcEEECCCcceeeccCCCcc-cccCCcccccccCHhHh------cc---------CCcCccccchHHHHHHHHHHhcCCC
Confidence 4577874 45555433221 12235677889999998 33 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .++ +. ... .........+.+++.+|+..+|++||+..++...+..
T Consensus 203 p~~~~~~~~~~~~~~--~~-------~~~------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 203 PYPGMSNPEVIRALE--RG-------YRM------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCCHHHHHHHHh--CC-------CCC------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99765333111 000 00 000 0001112247789999999999999999888776653
No 440
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.12 E-value=1.6e-11 Score=122.11 Aligned_cols=47 Identities=26% Similarity=0.458 Sum_probs=40.7
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
.++||+.|||||++ .+ ..++.++|||||||+||+|++|+ ||......
T Consensus 203 ~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 250 (376)
T cd05598 203 SLVGTPNYIAPEVL------LR---------TGYTQLCDWWSVGVILYEMLVGQPPFLADTPA 250 (376)
T ss_pred ccCCCccccCHHHH------cC---------CCCCcceeeeeccceeeehhhCCCCCCCCCHH
Confidence 57899999999999 43 55778999999999999999999 99876543
No 441
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.12 E-value=5.2e-11 Score=113.79 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=72.7
Q ss_pred eeeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+.+ +++.+.............+++.|||||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~~~~~ 230 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESI------FY---------NRYTTESDVWAYGVVLWEIFSYGM 230 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHH------hc---------CCCCchhHHHHHHHHHHHHHhCCC
Confidence 34578874 44443322111112234567889999998 33 567889999999999999998 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.+.....+. .+. . ..... ........+.+++.+||..+|.+||++.++.+.+.
T Consensus 231 ~p~~~~~~~~~~~~~~---~--------------~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 231 QPYYGMAHEEVIYYVR---D--------------GNVLS----CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCCHHHHHHHHh---c--------------CCCCC----CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 99765433111 000 0 00000 00011234788999999999999999988876543
No 442
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.12 E-value=5e-11 Score=112.22 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=71.4
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+-.|+. |++++........ ......|++.|+|||++ .+ ..++.++||||||+++|+|++|+
T Consensus 141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~ 205 (263)
T cd06625 141 GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI------SG---------EGYGRKADVWSVGCTVVEMLTEKP 205 (263)
T ss_pred CCEEEeecccceeccccccccccccCCCcCccccCccee------cc---------CCCCchhhhHHHHHHHHHHHhCCC
Confidence 346777 4555443322110 01347799999999998 43 44778999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||......... ... ...... .........+.+++.+||.++|.+||+..++..
T Consensus 206 p~~~~~~~~~~~~~~---------~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 206 PWAEFEAMAAIFKIA---------TQPTNP-----------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CccccchHHHHHHHh---------ccCCCC-----------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 99764332111 000 000000 000011224778999999999999999877654
No 443
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.12 E-value=6.4e-11 Score=114.01 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=77.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+++.+.............+++.|||||++ .+ ..++.++|||||||++|||++ |.
T Consensus 146 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~~---------~~~~~~~DiwslG~~l~el~t~g~~ 210 (303)
T cd05110 146 NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI------HY---------RKFTHQSDVWSYGVTIWELMTFGGK 210 (303)
T ss_pred CceEEccccccccccCcccccccCCCccccccCCHHHh------cc---------CCCChHHHHHHHHHHHHHHHhCCCC
Confidence 457888 566665543322112245668899999998 33 557789999999999999998 77
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+..+.. . ...+. ........+.+++.+|+..+|++||+..++.+.++.+.
T Consensus 211 p~~~~~~~~~~~~~~--~------~~~~~------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 211 PYDGIPTREIPDLLE--K------GERLP------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCCCCCHHHHHHHHH--C------CCCCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 997643321110000 0 00000 00111234678999999999999999999888877764
No 444
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.12 E-value=5.7e-08 Score=98.23 Aligned_cols=197 Identities=8% Similarity=0.019 Sum_probs=129.2
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeC---CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc--EE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSF---DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG--IF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~--i~ 318 (538)
..+..|...+.+.+|+ |+.|+..+. +..|.+||+.+++.. .+..+.+.+.+.+|+|++..++++.+.++. |+
T Consensus 195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 273 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIY 273 (435)
T ss_pred EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEE
Confidence 4466788899999999 788887764 468999999887653 455566778899999988888778877766 66
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-CC--cEEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (538)
+||+.++... ....+.. ......++|||+.++..+. +| .|+++|+.+++.. .+..+...+....|+ ++
T Consensus 274 ~~d~~~~~~~----~Lt~~~~--~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~~SpdG~ 346 (435)
T PRK05137 274 TMDLRSGTTT----RLTDSPA--IDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRYSTPVWSPRGD 346 (435)
T ss_pred EEECCCCceE----EccCCCC--ccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcccCeEECCCCC
Confidence 6677654321 1111111 1223588999998877664 33 6888898766543 343345556778888 45
Q ss_pred EEEEEecC---CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC------CcEEEEeCC
Q 009274 394 VLYSGSRD---GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES------GSIKVWRND 454 (538)
Q Consensus 394 ~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~ 454 (538)
.|+..+.+ ..|.+||+.++.. ..+.... . .....|+|||+.|+..+.+ ..+.++|..
T Consensus 347 ~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~~--~-~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 347 LIAFTKQGGGQFSIGVMKPDGSGE-RILTSGF--L-VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred EEEEEEcCCCceEEEEEECCCCce-EeccCCC--C-CCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 66665543 3688899865543 3333221 1 2236899999988776543 246666643
No 445
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.12 E-value=1.2e-08 Score=90.28 Aligned_cols=148 Identities=11% Similarity=0.175 Sum_probs=98.5
Q ss_pred EEEEEecCCCCEEEEEcC---------CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEE--eeCCCcE
Q 009274 296 MAVVYVDEDQPLCISGDS---------GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT--GSGDRTI 364 (538)
Q Consensus 296 ~~l~~~~~~~~~l~s~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i 364 (538)
..+.|++++..+++.... -|...+|.++..... ......... ....-.+++|+++.+++ |..++.|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~--~~~i~l~~~-~~I~~~~WsP~g~~favi~g~~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP--VESIELKKE-GPIHDVAWSPNGNEFAVIYGSMPAKV 85 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc--cceeeccCC-CceEEEEECcCCCEEEEEEccCCccc
Confidence 356677777766665551 134556666433221 122111111 11234588899987654 4467899
Q ss_pred EEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec---CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE
Q 009274 365 KAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR---DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL 439 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 439 (538)
.+||++ ++.+..+. ...++.+.|+ ++++++++. .|.|.+||.++.+.+...... . ...+.|+|+|+++
T Consensus 86 ~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~--~--~t~~~WsPdGr~~ 158 (194)
T PF08662_consen 86 TLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS--D--ATDVEWSPDGRYL 158 (194)
T ss_pred EEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC--c--EEEEEEcCCCCEE
Confidence 999996 66666664 5678899999 568888764 466999999988887776532 2 3447999999999
Q ss_pred EEEeC------CCcEEEEeC
Q 009274 440 VVSHE------SGSIKVWRN 453 (538)
Q Consensus 440 ~~~~~------dg~i~iwd~ 453 (538)
+++.. |+.++||+.
T Consensus 159 ~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 159 ATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred EEEEeccceeccccEEEEEe
Confidence 99875 688889983
No 446
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.12 E-value=2.8e-11 Score=119.58 Aligned_cols=47 Identities=23% Similarity=0.403 Sum_probs=40.8
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
..+||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.+.+..
T Consensus 195 ~~~Gt~~Y~aPE~~------~~---------~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~ 242 (363)
T cd05628 195 STVGTPDYIAPEVF------MQ---------TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ 242 (363)
T ss_pred cccCCccccCHHHH------cC---------CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence 57899999999999 43 56788999999999999999999 99875444
No 447
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.11 E-value=6.7e-11 Score=110.89 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=72.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|++ |+++...+.... ......++..|||||++ .+ ..++.++|+||||+++|+|++ |+
T Consensus 136 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~------~~---------~~~~~~~Di~slG~il~~l~~~g~ 199 (256)
T cd05059 136 DNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVF------DY---------SRFSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCcEEECCcccceeccccccc-ccCCCCCCccccCHHHh------cc---------CCCCchhhHHHHHHHHHHHhccCC
Confidence 4568888 455555443221 11223345689999998 33 567789999999999999999 77
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. ........... ......+.+++.+||..+|++||+..++.+.
T Consensus 200 ~p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 200 MPYERFSNSEVV---------------------ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99764333111 00000000000 1122347889999999999999998887664
No 448
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.11 E-value=3.6e-11 Score=115.35 Aligned_cols=114 Identities=12% Similarity=0.166 Sum_probs=71.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... .....|++.|||||++ .+ ..++.++|+|||||++|+|++|+ |
T Consensus 154 ~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~~g~~p 216 (297)
T cd06659 154 GRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVI------SR---------TPYGTEVDIWSLGIMVIEMVDGEPP 216 (297)
T ss_pred CcEEEeechhHhhccccccc--ccceecCccccCHHHH------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 456777 444444322111 2357899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... . ......+ ............+.+++.+||..+|.+||+..++.+
T Consensus 217 ~~~~~~~~~~-------------~----~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 217 YFSDSPVQAM-------------K----RLRDSPP-PKLKNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCCCHHHHH-------------H----HHhccCC-CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 9754332100 0 0000000 000000111223778999999999999999887665
No 449
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.11 E-value=8.7e-11 Score=111.01 Aligned_cols=113 Identities=18% Similarity=0.253 Sum_probs=75.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-+|+. |+++...+.+ ..+...|++.|+|||++ .+ ..++.++|+||||+++|+|++|+ |
T Consensus 151 ~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~------~~---------~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIV------KN---------EPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred CcEEEecccceeeccccc---ccccccCcccCcChhhh------cC---------CCCchHHHHHHHHHHHHHHHhCCCc
Confidence 347888 4555555443 24568899999999998 33 45778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
|......... ..... ....+... .....+.+++.+|+..+|++||+..++...+
T Consensus 213 ~~~~~~~~~~-----------------~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 213 FYSTNMLSLA-----------------TKIVE---AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred ccccCHHHHH-----------------HHHhh---ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 9765333111 00000 00000000 1123488899999999999999998887654
No 450
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.11 E-value=4.7e-11 Score=113.70 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=63.9
Q ss_pred hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhh
Q 009274 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (538)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (538)
...+|++.|+|||++... ......++.++|+|||||++|+|++|. ||....+...... .
T Consensus 179 ~~~~~~~~y~aPE~l~~~----------~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~----------~ 238 (282)
T cd06636 179 NTFIGTPYWMAPEVIACD----------ENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL----------I 238 (282)
T ss_pred CcccccccccCHhhcCcc----------cCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh----------H
Confidence 357899999999998111 011345778999999999999999999 9976533311100 0
Q ss_pred cchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
..... +..........+.+++.+||..+|.+||++.++.+
T Consensus 239 ~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PRNPP---------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhCCC---------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 00000011224788999999999999999877653
No 451
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.11 E-value=2.9e-11 Score=113.31 Aligned_cols=113 Identities=14% Similarity=0.207 Sum_probs=71.5
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ ++..+..... ......|++.|+|||++ .+ ..++.++||||||+++|+|++|+ |
T Consensus 136 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~------~~---------~~~~~~~Di~s~G~il~~l~~g~~p 198 (256)
T cd06612 136 GQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVI------QE---------IGYNNKADIWSLGITAIEMAEGKPP 198 (256)
T ss_pred CcEEEcccccchhcccCcc--ccccccCCccccCHHHH------hc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 4577884 4454443221 13346799999999998 43 45678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ... . ........ ... ....+.+++.+|+..+|++||++.++..
T Consensus 199 ~~~~~~~~~~~~~~---------~-~~~~~~~~-~~~--------~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 199 YSDIHPMRAIFMIP---------N-KPPPTLSD-PEK--------WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCcchhhhhhhhc---------c-CCCCCCCc-hhh--------cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 9765433111 000 0 00000000 000 1113678999999999999999877653
No 452
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.11 E-value=5.9e-11 Score=112.03 Aligned_cols=117 Identities=20% Similarity=0.374 Sum_probs=74.7
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+.+ +++.+..... ......|++.|+|||++ .+ ..++.++|+|||||++|+|++|. |
T Consensus 143 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 205 (267)
T cd08224 143 GVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI------HE---------NGYNFKSDIWSLGCLLYEMAALQSP 205 (267)
T ss_pred CcEEEeccceeeeccCCCc--ccceecCCccccCHHHh------cc---------CCCCchhcHHHHHHHHHHHHHCCCC
Confidence 3456764 4444433221 13357899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhh--ee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 89 FTKELIDY--IR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 89 f~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|....... +. .+. .. ...+.+ .. .....+.+++.+||..+|++||+..++.+.+.++
T Consensus 206 ~~~~~~~~~~~~~~~~---~~----~~~~~~--~~-----------~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 206 FYGDKMNLYSLCKKIE---KC----DYPPLP--AD-----------HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred cccCCccHHHHHhhhh---cC----CCCCCC--hh-----------hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 96543220 00 000 00 000000 00 0112377899999999999999999888876654
No 453
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.11 E-value=7.9e-11 Score=109.98 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=72.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
...|+. |+++........ ......+++.|+|||++ .+ ..++.++||||||+++|+|++ |.
T Consensus 130 ~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~ll~~~~~~g~~ 193 (250)
T cd05085 130 NVLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEAL------NY---------GRYSSESDVWSYGILLWETFSLGVC 193 (250)
T ss_pred CeEEECCCccceeccccccc-cCCCCCCcccccCHHHh------cc---------CCCCchhHHHHHHHHHHHHhcCCCC
Confidence 346787 555554432211 01123556789999998 33 567789999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||......... .......... .......+.+++.+|++.+|.+||+..++.+.+
T Consensus 194 p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 194 PYPGMTNQQAR---------------------EQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 99765333111 0000000000 001123478899999999999999998887654
No 454
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.11 E-value=8.1e-11 Score=111.16 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=73.8
Q ss_pred eeeeec--cccccccccchhhh-hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLF-LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
..+|+. |+++.......... .....+++.|||||++ .+ ..++.++|||||||++|||++ |+
T Consensus 144 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~~---------~~~~~~~Dv~slG~il~ell~~g~ 208 (268)
T cd05063 144 LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAI------AY---------RKFTSASDVWSFGIVMWEVMSFGE 208 (268)
T ss_pred CcEEECCCccceecccccccceeccCCCcCceecCHHHh------hc---------CCcChHhHHHHHHHHHHHHHhCCC
Confidence 357777 55554443221111 1123345689999998 32 456789999999999999998 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. ....+ ........+.+++.+|+..+|+.||+..++...+.++
T Consensus 209 ~p~~~~~~~~~~~~i~~---------~~~~~------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 209 RPYWDMSNHEVMKAIND---------GFRLP------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCcCCHHHHHHHHhc---------CCCCC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99765433111 0000 00000 0001122377899999999999999999988877654
No 455
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.10 E-value=1.9e-11 Score=109.75 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=67.0
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchh-------hhhheeecccc
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKE-------LIDYIRCVSTK 103 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~-------~~~~~~~~~~~ 103 (538)
+.+.+||..|||||+..-...+ .-.|+.+||.||||||||-||.|. ||.+. +.... |.
T Consensus 243 L~tPvGSAEfMAPEVVd~fv~q----------A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~-Cr--- 308 (463)
T KOG0607|consen 243 LLTPVGSAEFMAPEVVDVFVDQ----------ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV-CR--- 308 (463)
T ss_pred ccCcccchhhcchhHHhhhccc----------cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc-cH---
Confidence 5579999999999998333222 367889999999999999999999 99762 11100 00
Q ss_pred ccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 104 ASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
......+..+++.-.+.|+..+.....+..+++...|-.++.+|-+++.+.
T Consensus 309 -----~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 309 -----VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred -----HHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 000011112222222233333333333366788888888888887766543
No 456
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.10 E-value=4e-11 Score=114.72 Aligned_cols=114 Identities=12% Similarity=0.189 Sum_probs=72.2
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.++ ++.+..... ......|++.|||||++ .+ ..++.++|+||||+++|||++|. |
T Consensus 155 ~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 155 GRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVI------SR---------LPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred CCEEEccCcchhhcccccc--cCceeecCccccCHHHH------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 46788854 444332211 13457899999999998 32 45778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .......+..... .......+.+++.+|+..+|.+||++.++.+
T Consensus 218 ~~~~~~~~~~-----------------~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 218 YFNEPPLQAM-----------------RRIRDNLPPRVKD-SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred CCCCCHHHHH-----------------HHHHhcCCCcccc-ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 9764333110 0000000000000 0011123778999999999999999887765
No 457
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.10 E-value=6.8e-11 Score=110.83 Aligned_cols=110 Identities=22% Similarity=0.361 Sum_probs=72.6
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
+.|+. |+++....... .....|++.|||||++ .+ ...+.++|+||||+++|+|++|+ ||
T Consensus 140 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~~l~~~~~~~ 201 (256)
T cd08220 140 VVKIGDFGISKILSSKSK---AYTVVGTPCYISPELC------EG---------KPYNQKSDIWALGCVLYELASLKRAF 201 (256)
T ss_pred EEEEccCCCceecCCCcc---ccccccCCcccCchhc------cC---------CCCCcccchHHHHHHHHHHHhCCCCc
Confidence 56777 44555443321 2347899999999998 33 45678999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.......... .................+.+++.+||..+|++||+..++..
T Consensus 202 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 202 EAANLPALVL--------------------KIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ccCchHHHHH--------------------HHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 8754431110 00000000000112234788999999999999999887654
No 458
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.10 E-value=5.8e-11 Score=113.07 Aligned_cols=118 Identities=15% Similarity=0.152 Sum_probs=72.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |++++...... ....+.||+.|||||++..... ....++.++|+|||||++|+|++|. |
T Consensus 140 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slGvil~el~~g~~p 207 (282)
T cd06643 140 GDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETS----------KDRPYDYKADVWSLGITLIEMAQIEPP 207 (282)
T ss_pred CCEEEcccccccccccccc--ccccccccccccCHhhccccCC----------CCCCCCccchhhhHHHHHHHHccCCCC
Confidence 446777 45555432211 1345789999999999821110 1234667999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .+. +.. .+ ... ........+.+++.+||+.+|++||+..++.+
T Consensus 208 ~~~~~~~~~~~~~~-~~~--------~~--------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 208 HHELNPMRVLLKIA-KSE--------PP--------TLA--QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ccccCHHHHHHHHh-hcC--------CC--------CCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9765433111 000 000 00 000 00001124778999999999999999877654
No 459
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.10 E-value=6.8e-11 Score=112.04 Aligned_cols=118 Identities=16% Similarity=0.217 Sum_probs=75.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
-.|+. |+++.+.............+++.||+||++ .+ ..++.++|||||||++|+|++ |+ |
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~~---------~~~~~~sDi~slG~il~el~~~g~~p 215 (273)
T cd05074 151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESL------AD---------NVYTTHSDVWAFGVTMWEIMTRGQTP 215 (273)
T ss_pred CEEECcccccccccCCcceecCCCccCchhhcCHhHH------hc---------CccchhhhhHHHHHHHHHHhhCCCCC
Confidence 45777 556655433211112245677899999998 32 456789999999999999999 77 8
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|.......+.....+.. ... ........+.+++.+||+.+|+.||+..++...+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 216 YAGVENSEIYNYLIKGN-----RLK---------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCHHHHHHHHHcCC-----cCC---------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 87654331110000000 000 0011223478899999999999999999998877654
No 460
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.10 E-value=3.3e-11 Score=119.87 Aligned_cols=47 Identities=26% Similarity=0.444 Sum_probs=40.4
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
.++||+.|||||++ .+ ..++.++|||||||+||||+||+ ||......
T Consensus 207 ~~~gt~~Y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~ 254 (381)
T cd05626 207 SLVGTPNYIAPEVL------LR---------KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT 254 (381)
T ss_pred cccCCccccCHHHH------cC---------CCCCCccceeehhhHHHHHHhCCCCCcCCCHH
Confidence 57899999999999 33 45788999999999999999999 99875443
No 461
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.10 E-value=4.4e-11 Score=114.03 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=45.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ......|++.|+|||++ .| ...++.++|||||||++|+|+||. |
T Consensus 136 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~tg~~p 199 (284)
T cd07839 136 GELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVL------FG--------AKLYSTSIDMWSAGCIFAELANAGRP 199 (284)
T ss_pred CcEEECccchhhccCCCCC--CcCCCccccCCcChHHH------hC--------CcccCcHHHHHHHHHHHHHHHhcCCC
Confidence 456777 45554443221 13457889999999998 33 133578999999999999999999 7
Q ss_pred cc
Q 009274 89 FT 90 (538)
Q Consensus 89 f~ 90 (538)
|.
T Consensus 200 ~~ 201 (284)
T cd07839 200 LF 201 (284)
T ss_pred Cc
Confidence 53
No 462
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.10 E-value=4.8e-11 Score=112.58 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=68.6
Q ss_pred eeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
-.|+.+ +++.+... ....|++.|||||++ .+ ..+++++|+||||+++|+|++|+ ||
T Consensus 148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~il~~l~~g~~p~ 206 (267)
T PHA03390 148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKI------KG---------HNYDVSFDWWAVGVLTYELLTGKHPF 206 (267)
T ss_pred eEEEecCccceecCCC------ccCCCCCcccChhhh------cC---------CCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 467774 44544322 246799999999999 33 45678999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch-hhHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL-TNVW 159 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~-~~~~ 159 (538)
.......+. ...+.... .............+.+++.+||+.+|.+|++. .++.
T Consensus 207 ~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 207 KEDEDEELD----------------LESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred CCCCcchhh----------------HHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 754322110 00000000 00000011122347889999999999999974 5544
No 463
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.10 E-value=6.7e-11 Score=111.43 Aligned_cols=111 Identities=21% Similarity=0.322 Sum_probs=72.6
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+.. ++..+.... .+.....|++.|||||++ .+ ..++.++|+||||+++|+|++|. |
T Consensus 147 ~~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~pE~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p 209 (265)
T cd08217 147 NNVKLGDFGLAKILGHDS--SFAKTYVGTPYYMSPEQL------NH---------MSYDEKSDIWSLGCLIYELCALSPP 209 (265)
T ss_pred CCEEEecccccccccCCc--ccccccccCCCccChhhh------cC---------CCCCchhHHHHHHHHHHHHHHCCCc
Confidence 4567774 444444332 223457899999999998 33 45778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+. . ....... ......+.+++.+||..+|.+||+..++.+
T Consensus 210 ~~~~~~~~~~~~~~---~-------~~~~~~~-----------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 210 FTARNQLQLASKIK---E-------GKFRRIP-----------YRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ccCcCHHHHHHHHh---c-------CCCCCCc-----------cccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 9875433111 000 0 0000000 011123778999999999999999888764
No 464
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.09 E-value=8.7e-11 Score=112.12 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=72.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+..... ......||+.|||||++..... ....++.++|+|||||++|+|++|+ ||
T Consensus 162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slGvi~~el~~g~~p~ 229 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQ----------LDSTYDARCDVWSLGITAIELGDGDPPL 229 (286)
T ss_pred CEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhh----------ccccccchhhhhhHHHHHHHHhcCCCCC
Confidence 46777 45555443221 1335689999999999822111 1244678999999999999999999 98
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
......... ... ..... .... .......+.+++.+||+.+|++||++.++.+
T Consensus 230 ~~~~~~~~~~~~~---------~~~~~--------~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 230 ADLHPMRALFKIP---------RNPPP--------TLHQ--PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred CCCchhHHHhhcc---------ccCCC--------cccC--CCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 765433111 000 00000 0000 0001123778999999999999999887654
No 465
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.09 E-value=3.7e-11 Score=115.57 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=73.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++....... ......+++.|||||++ .+ ...++.++|||||||++|+|+||+ |
T Consensus 141 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~------~~--------~~~~~~~~Dv~slG~~l~el~tg~~~ 204 (301)
T cd07873 141 GELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDIL------LG--------STDYSTQIDMWGVGCIFYEMSTGRPL 204 (301)
T ss_pred CcEEECcCcchhccCCCCC--cccccceeecccCcHHH------hC--------CCCCccHHHHHHHHHHHHHHHhCCCC
Confidence 457887 44444332211 24457889999999998 32 134667999999999999999999 9
Q ss_pred cchhhhhhee-e----ccccccCcchhhcchhhHHHH--------HHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIR-C----VSTKASDDNIACLGMYMAWME--------KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|...+..... . +...... .+.......+ .....+....+.....+.+++.+||..+|.+||++
T Consensus 205 f~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~ 280 (301)
T cd07873 205 FPGSTVEEQLHFIFRILGTPTEE----TWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA 280 (301)
T ss_pred CCCCCHHHHHHHHHHHcCCCChh----hchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence 9865433111 0 0000000 0000000000 00000001111222347889999999999999998
Q ss_pred hhHHH
Q 009274 156 TNVWK 160 (538)
Q Consensus 156 ~~~~~ 160 (538)
.++.+
T Consensus 281 ~eil~ 285 (301)
T cd07873 281 EEAMK 285 (301)
T ss_pred HHHhc
Confidence 87665
No 466
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.09 E-value=2.8e-11 Score=118.91 Aligned_cols=100 Identities=20% Similarity=0.202 Sum_probs=68.8
Q ss_pred cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh-
Q 009274 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID- 95 (538)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~- 95 (538)
|.++..++. +.+.+=|..|.|||++ ++ -.|+++||+||||++||+||+|+ ||......
T Consensus 461 G~a~~~~~~-----~~tp~~t~~y~APEvl------~~---------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ 520 (612)
T KOG0603|consen 461 GFWSELERS-----CDTPALTLQYVAPEVL------AI---------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI 520 (612)
T ss_pred chhhhCchh-----hcccchhhcccChhhh------cc---------CCCCcchhhHHHHHHHHHHHhCCCccccCCchH
Confidence 555666554 3346678999999999 32 56889999999999999999999 99764222
Q ss_pred heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.|.+ ...++ ...+.+++ +..+++.++|..+|.+|+.+.++..
T Consensus 521 ei~~-----------~i~~~-~~s~~vS~-----------~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 521 EIHT-----------RIQMP-KFSECVSD-----------EAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHH-----------hhcCC-ccccccCH-----------HHHHHHHHhccCChhhCcChhhhcc
Confidence 1110 00111 11122222 2567999999999999999987765
No 467
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.09 E-value=8.6e-11 Score=112.66 Aligned_cols=113 Identities=15% Similarity=0.208 Sum_probs=72.0
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ +++.+..... ......|++.|||||.+ .+ ..++.++|+|||||++|+|++|+ |
T Consensus 152 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slGvil~~lltg~~p 214 (296)
T cd06655 152 GSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVV------TR---------KAYGPKVDIWSLGIMAIEMVEGEPP 214 (296)
T ss_pred CCEEEccCccchhcccccc--cCCCcCCCccccCcchh------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 4567774 4454443321 13457899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+.... .+. ... ...+ .........+.+++.+||..+|.+||+..++..
T Consensus 215 f~~~~~~~~~~~~~---------~~~-~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 215 YLNENPLRALYLIA---------TNG-TPEL---------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCCCCHHHHHHHHH---------hcC-Cccc---------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 9875433100 000 000 0000 000011123677999999999999999887665
No 468
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.09 E-value=7e-11 Score=111.16 Aligned_cols=93 Identities=18% Similarity=0.378 Sum_probs=62.5
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-ccchhhhhheeeccccccCcchhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (538)
...|++.|||||++ .+ ...++.++|||||||+||+|++ |+ ||..........+
T Consensus 167 ~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~----------- 221 (262)
T cd05077 167 ECVERIPWIAPECV------ED--------SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF----------- 221 (262)
T ss_pred cccccccccChhhh------cC--------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-----------
Confidence 46799999999988 21 2456789999999999999984 77 8876433211000
Q ss_pred cchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
... . ..........+.+++.+||..+|.+||...++.+.+
T Consensus 222 ------~~~-~----~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 ------YEG-Q----CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ------Hhc-C----ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 0 000000112377899999999999999999887754
No 469
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.09 E-value=4.8e-11 Score=113.82 Aligned_cols=132 Identities=13% Similarity=0.094 Sum_probs=73.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++..+.... ......|++.|||||++ .+ ...++.++|+|||||++|+|+||+
T Consensus 137 ~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Dv~slG~il~~l~tg~~ 200 (285)
T cd07861 137 KGVIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVL------LG--------SPRYSTPVDIWSIGTIFAEMATKKP 200 (285)
T ss_pred CCcEEECcccceeecCCCcc--cccCCcccccccChHHh------cC--------CCCcCcHHHHHHHHHHHHHHHHCCC
Confidence 3457888 44554432211 13346889999999998 33 134578899999999999999999
Q ss_pred ccchhhhhh-ee-ecc-ccccCcchhhcchhh---HHHHHHHHH----HHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 88 QFTKELIDY-IR-CVS-TKASDDNIACLGMYM---AWMEKVTYL----LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 88 pf~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
||.+..... +. .++ ...... ..+.... ......+.. ..........++.+++.+||..+|.+||++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 278 (285)
T cd07861 201 LFHGDSEIDQLFRIFRILGTPTE--DVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKK 278 (285)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCh--hhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 997643220 00 000 000000 0000000 000000000 00001112334778999999999999999877
Q ss_pred HHH
Q 009274 158 VWK 160 (538)
Q Consensus 158 ~~~ 160 (538)
+..
T Consensus 279 ll~ 281 (285)
T cd07861 279 ALN 281 (285)
T ss_pred Hhc
Confidence 654
No 470
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.09 E-value=5e-08 Score=98.18 Aligned_cols=189 Identities=13% Similarity=0.132 Sum_probs=119.8
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCC---CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
+..+.+.+.+.+|+ |+.|+..+.+ ..|.+||+.+++... +....+.+.+.+|+|++..++++.+.+|...+|.+
T Consensus 191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 45677889999999 7888877643 359999999887543 33344566789999988888778888988777766
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-CCcEEEEE--CCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWS--LLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~iwd--~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
+..... ......+.. ......+++||+.++..+. +|...+|. +.+++... +..+.......+|+ +++++.
T Consensus 270 d~~~~~--~~~lt~~~~--~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~ 344 (427)
T PRK02889 270 NADGSG--LRRLTQSSG--IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAY 344 (427)
T ss_pred ECCCCC--cEECCCCCC--CCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEE
Confidence 532111 122211111 1122479999997776554 45555664 44444322 22222334456787 557776
Q ss_pred EecCC---cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 398 GSRDG---TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 398 ~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
.+.++ .|.+||+.+++... +.... .. ....|+|||+.|+.++.++
T Consensus 345 ~s~~~g~~~I~v~d~~~g~~~~-lt~~~--~~-~~p~~spdg~~l~~~~~~~ 392 (427)
T PRK02889 345 ISRVGGAFKLYVQDLATGQVTA-LTDTT--RD-ESPSFAPNGRYILYATQQG 392 (427)
T ss_pred EEccCCcEEEEEEECCCCCeEE-ccCCC--Cc-cCceECCCCCEEEEEEecC
Confidence 66554 69999998887543 32221 11 2258999999988877544
No 471
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.09 E-value=8.6e-11 Score=112.02 Aligned_cols=113 Identities=13% Similarity=0.206 Sum_probs=71.6
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.++ ++.+..... ......|++.|||||++ .+ ..++.++|+|||||++|+|++|+ |
T Consensus 152 ~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slGv~l~ell~g~~p 214 (285)
T cd06648 152 GRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPEVI------SR---------LPYGTEVDIWSLGIMVIEMVDGEPP 214 (285)
T ss_pred CcEEEcccccchhhccCCc--ccccccCCccccCHHHh------cC---------CCCCCcccHHHHHHHHHHHHhCCCC
Confidence 45677744 444332211 13346799999999998 33 45778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|....+.... .+. ........ ........+.+++.+||..+|++||+..++.+
T Consensus 215 ~~~~~~~~~~~~~~----------~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 215 YFNEPPLQAMKRIR----------DNLPPKLK---------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CcCCCHHHHHHHHH----------hcCCCCCc---------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 9764333111 000 00000000 00001234788999999999999999877654
No 472
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.09 E-value=3e-11 Score=119.62 Aligned_cols=47 Identities=19% Similarity=0.398 Sum_probs=40.2
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
..+||+.|||||++ .+ ..++.++|||||||++|+|++|. ||...+..
T Consensus 198 ~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~ 245 (364)
T cd05599 198 STVGTPDYIAPEVF------LQ---------TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ 245 (364)
T ss_pred ccccCccccCHHHH------cC---------CCCCCeeeeecchhHHHHhhcCCCCCCCCCHH
Confidence 46899999999998 33 56789999999999999999999 99876443
No 473
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.09 E-value=8.7e-11 Score=110.16 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhh-hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGLF-LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
..+|+. |+++.......... .+.-.+++.|||||++ .+ ..++.++|||||||++|+|++ |.
T Consensus 132 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~ 196 (257)
T cd05115 132 HYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECI------NF---------RKFSSRSDVWSYGITMWEAFSYGQ 196 (257)
T ss_pred CcEEeccCCccccccCCccceeccCCCCCCcccCCHHHH------cc---------CCCCchhhHHHHHHHHHHHhcCCC
Confidence 467887 56655443322100 1123346899999998 32 457789999999999999997 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+..... . ... .........++.+++.+|+..+|++||+..++.+.+...
T Consensus 197 ~p~~~~~~~~~~~~~~--~------~~~------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 197 KPYKKMKGPEVMSFIE--Q------GKR------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCcCcCCHHHHHHHHH--C------CCC------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 997653331110000 0 000 000012234578899999999999999999988776653
No 474
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.09 E-value=8.4e-11 Score=110.28 Aligned_cols=111 Identities=20% Similarity=0.341 Sum_probs=71.7
Q ss_pred eeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+.+ ++....+... ......|++.|+|||++ .+ ..++.++|+||||+++|+|++|. ||
T Consensus 140 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p~ 202 (257)
T cd08225 140 VAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEIC------QN---------RPYNNKTDIWSLGCVLYELCTLKHPF 202 (257)
T ss_pred eEEecccccchhccCCcc--cccccCCCccccCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 457774 4555443321 13346799999999998 32 56778999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
............ . ....+ .........+.+++.+|+..+|++||+..++.+
T Consensus 203 ~~~~~~~~~~~~---------~-------~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 203 EGNNLHQLVLKI---------C-------QGYFA----PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCccHHHHHHHH---------h-------cccCC----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 765433111000 0 00000 000111224788999999999999999887654
No 475
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.09 E-value=6.4e-11 Score=113.62 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=73.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++........ .....+++.|+|||++ .+ ...++.++|+||||+++|+|++|.
T Consensus 147 ~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~ 210 (295)
T cd07837 147 KGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAPEVL------LG--------STHYSTPVDIWSVGCIFAEMSRKQP 210 (295)
T ss_pred CCeEEEeecccceecCCCccc--cCCcccccCCCChHHh------hC--------CCCCCchHHHHHHHHHHHHHHcCCC
Confidence 4578888 555554332211 2235789999999998 22 134678999999999999999999
Q ss_pred ccchhhhhh-ee-eccccccCcchhhcch--hhHHH---HHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDY-IR-CVSTKASDDNIACLGM--YMAWM---EKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~-~~-~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+... +. ....-........... ..... ...+..+....+.....+.+++.+||..+|.+||++.++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 211 LFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 997643321 10 0000000000000000 00000 00000011111122334788999999999999999876643
No 476
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.09 E-value=1.5e-10 Score=110.42 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=73.0
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+.++ ++....... .....|++.|+|||++ .+ ..++.++|+|||||++|+|++|. |
T Consensus 144 ~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~------~~---------~~~~~~~Di~s~G~~l~~l~~~~~~ 205 (287)
T cd07838 144 GQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVL------LQ---------SSYATPVDMWSVGCIFAELFRRRPL 205 (287)
T ss_pred CCEEEeccCcceeccCCcc---cccccccccccChHHh------cc---------CCCCCcchhhhHHHHHHHHHhCCCc
Confidence 56788854 444433221 3356789999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhhee-e----ccccccCcchh----------hcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCc
Q 009274 89 FTKELIDYIR-C----VSTKASDDNIA----------CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (538)
Q Consensus 89 f~~~~~~~~~-~----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~ 153 (538)
|...+..... . ...... .... ............+.+ ...+.+++.+||+.+|.+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~li~~~l~~dp~~Rp 276 (287)
T cd07838 206 FRGTSEADQLDKIFDVIGLPSE-EEWPRNVSLPRSSFPSYTPRSFKSFVPEI--------CEEGLDLLKKMLTFNPHKRI 276 (287)
T ss_pred ccCCChHHHHHHHHHHcCCCCh-HhcCCCcccchhhcccccccchhhhhhhh--------hHHHHHHHHHHhccCCccCC
Confidence 8765432110 0 000000 0000 000000011111111 22367899999999999999
Q ss_pred chhhHHH
Q 009274 154 LLTNVWK 160 (538)
Q Consensus 154 ~~~~~~~ 160 (538)
++.++..
T Consensus 277 ~~~~il~ 283 (287)
T cd07838 277 SAFEALQ 283 (287)
T ss_pred CHHHHhc
Confidence 9887654
No 477
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.08 E-value=2.6e-11 Score=120.77 Aligned_cols=47 Identities=26% Similarity=0.425 Sum_probs=40.5
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~ 95 (538)
.++||+.|||||++ .+ ..++.++|||||||+||||++|+ ||...++.
T Consensus 207 ~~~gt~~Y~aPE~~------~~---------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~ 254 (382)
T cd05625 207 SLVGTPNYIAPEVL------LR---------TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPL 254 (382)
T ss_pred ccccCcccCCHHHh------cC---------CCCCCeeeEEechHHHHHHHhCCCCCCCCCHH
Confidence 57899999999999 33 56789999999999999999999 99875443
No 478
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.08 E-value=5.2e-11 Score=116.70 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=77.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++............+..+++.|||||++ .+ ..++.++||||||+++|+|++ |.
T Consensus 215 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~ 279 (343)
T cd05103 215 NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI------FD---------RVYTIQSDVWSFGVLLWEIFSLGA 279 (343)
T ss_pred CCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh------cC---------CCCCchhhHHHHHHHHHHHHHCCC
Confidence 3567888 566655333221112235677899999998 33 457789999999999999997 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||......... .. .... ......+ .....+.+++.+|++.+|.+||+..++.+.+..+
T Consensus 280 ~p~~~~~~~~~~-------------~~---~~~~----~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 280 SPYPGVKIDEEF-------------CR---RLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CCCCCccccHHH-------------HH---HHhc----cCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 98754221000 00 0000 0000000 1112467889999999999999999999988877
Q ss_pred hc
Q 009274 166 II 167 (538)
Q Consensus 166 ~~ 167 (538)
.+
T Consensus 340 ~~ 341 (343)
T cd05103 340 LQ 341 (343)
T ss_pred Hh
Confidence 53
No 479
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.08 E-value=7e-11 Score=112.24 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=66.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+++...... .....||+.|||||++ .+ ...++.++|||||||+||+|++|. |
T Consensus 134 ~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~p 195 (279)
T cd05633 134 GHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVL------QK--------GTAYDSSADWFSLGCMLFKLLRGHSP 195 (279)
T ss_pred CCEEEccCCcceeccccC----ccCcCCCcCccCHHHh------cC--------CCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 457777 5555554332 2246899999999998 21 134678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|......... ....................+.+++.+||..+|.+|++
T Consensus 196 f~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 196 FRQHKTKDKH------------------EIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred cCCCCCcCHH------------------HHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence 9754222000 00000000000000011224778999999999999996
No 480
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.08 E-value=1.2e-10 Score=112.12 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=64.6
Q ss_pred cccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-ccchhhhhheeeccccccCcchhhcc
Q 009274 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLG 113 (538)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (538)
.+++.|||||++ .+ ..++.++|||||||+||+|+| |. ||.........
T Consensus 184 ~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--------------- 233 (303)
T cd05088 184 RLPVRWMAIESL------NY---------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--------------- 233 (303)
T ss_pred CCcccccCHHHH------hc---------cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH---------------
Confidence 346789999998 22 446789999999999999998 88 99764333111
Q ss_pred hhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 114 MYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
...+..... ........+.+++.+||..+|++||++.++...+..++
T Consensus 234 ------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 234 ------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred ------HHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000000 00112234778999999999999999998887776654
No 481
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.08 E-value=1.1e-10 Score=109.11 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=62.2
Q ss_pred cccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-ccchhhhhhee-eccccccCcchhhc
Q 009274 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIR-CVSTKASDDNIACL 112 (538)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-pf~~~~~~~~~-~~~~~~~~~~~~~~ 112 (538)
.++..|+|||++ .+ ..++.++|+|||||++|+|+| |. ||......... .+. .. .
T Consensus 156 ~~~~~y~~PE~~------~~---------~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~--~~------~ 212 (251)
T cd05041 156 QIPIKWTAPEAL------NY---------GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE--SG------Y 212 (251)
T ss_pred cceeccCChHhh------cc---------CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh--cC------C
Confidence 346779999998 33 557889999999999999999 67 98765433111 000 00 0
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
... ........+.+++.+||..+|++||++.++.+.+.
T Consensus 213 ~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 213 RMP-------------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCC-------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 000 00011234788999999999999999988877553
No 482
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.08 E-value=5.6e-11 Score=112.31 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=70.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+. |+++...............|++.|||||++...... .....++.++|+|||||++|||++ |+
T Consensus 137 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~--------~~~~~~~~~~DiwslG~~l~el~~~g~~ 208 (269)
T cd05087 137 LTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGN--------LLVVDQTKESNVWSLGVTIWELFELGSQ 208 (269)
T ss_pred CcEEECCccccccccCcceeecCCCcCCcccccCHhHhcccccc--------ccccCCCccchhHHHHHHHHHHHhCCCC
Confidence 356777 455444332221112346789999999998211000 001245789999999999999996 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||............ ..+.....+..... .....+.+++.+|+ .+|++||+..++++.+
T Consensus 209 p~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 209 PYRHLSDEQVLTYT----------------VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCCCCChHHHHHHH----------------hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 99754333111000 00000000000000 11123566888888 6899999999988643
No 483
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.08 E-value=1.2e-10 Score=110.01 Aligned_cols=90 Identities=18% Similarity=0.275 Sum_probs=62.1
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhh-heeeccccccCcchhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIAC 111 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~~ 111 (538)
.+.|++.|+|||++ .+ ..++.++|+|||||++|+|++|. ||...... .+..
T Consensus 171 ~~~~~~~y~~pe~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~------------ 223 (267)
T cd06628 171 SLQGSVFWMAPEVV------KQ---------TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK------------ 223 (267)
T ss_pred ccCCCcCccChhHh------cc---------CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH------------
Confidence 46799999999998 33 45678999999999999999999 99764222 1000
Q ss_pred cchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 112 LGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.........+ .....+.+++.+||..+|.+||+..++.+
T Consensus 224 ----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 224 ----------IGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ----------HhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0000000000 11223778999999999999999877654
No 484
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.08 E-value=5.9e-11 Score=111.58 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=70.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+++.... ...+.|++.|+|||++ .+ ..++.++||||||++||+|++|. |
T Consensus 134 ~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 134 GHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETI------LG---------VGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred CcEEEeecccceeccc------cccCCCCcCccChhhh------cC---------CCCcchhhhHHHHHHHHHHHHCCCC
Confidence 346676 44444332 2247899999999998 43 34678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|.......+.. .........+..........+.+++.+||..+|+.||++..+.+.
T Consensus 193 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 193 FHAETPDAVFD-----------------NILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred CCCCCHHHHHH-----------------HHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 97654431110 000000000000000112347789999999999999987655443
No 485
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.08 E-value=4.9e-11 Score=112.53 Aligned_cols=120 Identities=18% Similarity=0.295 Sum_probs=71.5
Q ss_pred eeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
...|+. |++..+.+..... ....++|++.|||||++ .. ....+.++|+|||||++|+|++|+
T Consensus 139 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~------~~--------~~~~~~~~Dv~slG~i~~~l~~g~ 204 (267)
T cd06610 139 GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM------EQ--------VHGYDFKADIWSFGITAIELATGA 204 (267)
T ss_pred CCEEEcccchHHHhccCccccccccccccCChhhcChHHH------cc--------ccCcCcccchHhHhHHHHHHHhCC
Confidence 346666 4444444332221 12357899999999998 22 124678999999999999999999
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||............ ....+........ .......+.+++.+||..+|++||+..++..
T Consensus 205 ~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 205 APYSKYPPMKVLMLT---------LQNDPPSLETGAD------YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCccccChhhhHHHH---------hcCCCCCcCCccc------cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 99765433111000 0000000000000 0011123678999999999999999777654
No 486
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.08 E-value=9.8e-11 Score=109.78 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=71.5
Q ss_pred eeeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+.++ ++........ ......++..|+|||++ .+ ..++.++|+||||+++|+|++ |.
T Consensus 136 ~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~aPe~~------~~---------~~~~~~~Dv~slG~~l~el~~~g~ 199 (256)
T cd05112 136 NQVVKVSDFGMTRFVLDDQYT-SSTGTKFPVKWSSPEVF------SF---------SKYSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred CCeEEECCCcceeecccCccc-ccCCCccchhhcCHhHh------cc---------CCcChHHHHHHHHHHHHHHHcCCC
Confidence 346788855 4444322111 12234567899999998 33 557789999999999999998 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. .+.. ... ... .......+.+++.+||+.+|++||++.++.+.
T Consensus 200 ~p~~~~~~~~~~~~~~~-~~~----~~~----------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 200 TPYENRSNSEVVETINA-GFR----LYK----------------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCcCCHHHHHHHHhC-CCC----CCC----------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 99765333111 0000 000 000 00011237789999999999999998887664
No 487
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.08 E-value=2.7e-11 Score=114.00 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=71.6
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+-.|+.+ +++........ ......++..|||||++ .+ ..++.++||||||+++|+|+| |+
T Consensus 140 ~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~t~g~~ 203 (261)
T cd05068 140 NICKVADFGLARVIKEDIYE-AREGAKFPIKWTAPEAA------LY---------NRFSIKSDVWSFGILLTEIVTYGRM 203 (261)
T ss_pred CCEEECCcceEEEccCCccc-ccCCCcCceeccCcccc------cc---------CCCCchhhHHHHHHHHHHHHhcCCC
Confidence 3467774 45555422111 01122334689999998 33 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
||.+.....+. .+. . .... .........+.+++.+|+..+|.+||...++...+.
T Consensus 204 p~~~~~~~~~~~~~~---~-----~~~~-------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 204 PYPGMTNAEVLQQVD---Q-----GYRM-------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred CCCCCCHHHHHHHHH---c-----CCCC-------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 99875443211 000 0 0000 000111234778999999999999999998877554
No 488
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.07 E-value=4.8e-11 Score=116.94 Aligned_cols=64 Identities=19% Similarity=0.394 Sum_probs=48.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++..... .....||+.|||||++ .+ ...++.++|+|||||+||+|++|+
T Consensus 153 ~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Dv~slGvil~el~~g~~ 213 (342)
T cd07879 153 DCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI------LN--------WMHYNQTVDIWSVGCIMAEMLTGKT 213 (342)
T ss_pred CCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhh------cC--------ccccCchHHHHHHHHHHHHHHhCCC
Confidence 3568888 455554322 3467899999999998 32 134678999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||.+..
T Consensus 214 pf~~~~ 219 (342)
T cd07879 214 LFKGKD 219 (342)
T ss_pred CCCCCC
Confidence 998754
No 489
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.07 E-value=4e-11 Score=112.38 Aligned_cols=111 Identities=21% Similarity=0.339 Sum_probs=72.1
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.++ ++....... ......|++.|+|||++ .+ ...+.++|+||||+++|+|++|+ |
T Consensus 138 ~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~------~~---------~~~~~~~Dv~slG~i~~~l~~g~~~ 200 (256)
T cd08221 138 GLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELC------QG---------VKYNFKSDIWALGCVLYELLTLKRT 200 (256)
T ss_pred CCEEECcCcceEEcccccc--cccccCCCccccCHhhc------CC---------CCCCCcchhHHHHHHHHHHHHCCCC
Confidence 44678744 444433221 23467899999999998 43 34678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+. ...... ........+.+++.+||..+|++||++.++.+
T Consensus 201 ~~~~~~~~~~~~~~----------~~~~~~-----------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 201 FDATNPLNLVVKIV----------QGNYTP-----------VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CCCCCHHHHHHHHH----------cCCCCC-----------CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 9775443111 000 000000 00111223778999999999999999887654
No 490
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.07 E-value=5.4e-08 Score=98.26 Aligned_cols=189 Identities=14% Similarity=0.110 Sum_probs=124.1
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCC---CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC--cEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~ 318 (538)
..+..+...+.+.+|+ |++++.++.+ ..|++||+.+++... +..+.+.+.+++|+|++..++++.+.++ .|+
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~ 261 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIY 261 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEE
Confidence 3455566778888998 8888877654 479999998876543 3345566778999998887777776655 588
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC-C--cEEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD-R--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (538)
+||+.++..... ..... ......++++++.|+..+.. + .|+++|+.+++.. .+..+...+..+.|+ ++
T Consensus 262 ~~d~~~~~~~~l----~~~~~--~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~ 334 (417)
T TIGR02800 262 VMDLDGKQLTRL----TNGPG--IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGD 334 (417)
T ss_pred EEECCCCCEEEC----CCCCC--CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCC
Confidence 888876532211 11111 11123678899987766543 3 6888888776643 344455666778888 45
Q ss_pred EEEEEecCC---cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 394 VLYSGSRDG---TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 394 ~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
+++.++.++ .|.+||+.++... .+..... .. ...|+|+++.|+..+.++
T Consensus 335 ~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~--~~-~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 335 LIAFVHREGGGFNIAVMDLDGGGER-VLTDTGL--DE-SPSFAPNGRMILYATTRG 386 (417)
T ss_pred EEEEEEccCCceEEEEEeCCCCCeE-EccCCCC--CC-CceECCCCCEEEEEEeCC
Confidence 777777765 7899999876543 2222111 11 247899999888877654
No 491
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.07 E-value=5.8e-11 Score=114.43 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=64.6
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhhc
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (538)
...|++.|+|||++ .+ ..++.++|+|||||+||+|++|. ||.+.....+.
T Consensus 175 ~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~-------------- 225 (305)
T cd05609 175 QVCGTPEYIAPEVI------LR---------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF-------------- 225 (305)
T ss_pred CCccCccccCchhc------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------------
Confidence 46799999999998 22 45678999999999999999999 99865443111
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
. .........+.. .......+.+++.+||+.+|++||+.+.+.+.+..
T Consensus 226 ~---~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 G---QVISDDIEWPEG-DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred H---HHHhcccCCCCc-cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0 000000000000 00112237889999999999999997665554444
No 492
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.07 E-value=1.1e-10 Score=109.40 Aligned_cols=113 Identities=17% Similarity=0.237 Sum_probs=74.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++...... ....++..|+|||++ .+ ..++.++|+||||+++|+|++ |+
T Consensus 138 ~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~------~~---------~~~~~~~Di~slG~il~~l~~~g~ 197 (256)
T cd05039 138 DLVAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEAL------RE---------KKFSTKSDVWSFGILLWEIYSFGR 197 (256)
T ss_pred CCCEEEccccccccccccc-----ccCCCcccccCchhh------cC---------CcCCcHHHHHHHHHHHHHHHhcCC
Confidence 3467888 4556654321 134567789999998 33 567789999999999999998 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+. .+... .. .. .+ ......+.+++.+||..+|.+||+..++...+..
T Consensus 198 ~p~~~~~~~~~~~~~~~~--------~~-~~-----~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 198 VPYPRIPLKDVVPHVEKG--------YR-ME-----AP-------EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCCCCHHHHHHHHhcC--------CC-CC-----Cc-------cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 99765444211 00000 00 00 00 0112247789999999999999999988876653
No 493
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.07 E-value=1e-10 Score=109.64 Aligned_cols=113 Identities=16% Similarity=0.143 Sum_probs=71.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
..+|+.. +++...+.... ......|+..|+|||++ .+ ..++.++|||||||+||+|++ |.
T Consensus 137 ~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~------~~---------~~~~~~~Di~slG~~l~~l~~~g~~ 200 (256)
T cd05113 137 GCVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL------LY---------SKFSSKSDVWAFGVLMWEVYSLGKM 200 (256)
T ss_pred CCEEECCCccceecCCCcee-ecCCCccChhhCCHHHH------hc---------CcccchhHHHHHHHHHHHHhcCCCC
Confidence 4678884 55554433211 01123466789999998 33 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. .+. +. .. . .........+.+++.+||..+|.+||+..++...
T Consensus 201 p~~~~~~~~~~~~~~--~~-----~~-~-------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 201 PYERFNNSETVEKVS--QG-----LR-L-------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CcCcCCHHHHHHHHh--cC-----CC-C-------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 99764332111 000 00 00 0 0000112247789999999999999999887654
No 494
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.07 E-value=5.3e-11 Score=111.98 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=70.1
Q ss_pred eeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
.|+.+ ++..+..... ....+.|++.|+|||++ .+ ..+..++.++|+|||||++|+|+||. ||.
T Consensus 140 ~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~------~~------~~~~~~~~~~Di~slG~~l~~~~tg~~p~~ 205 (262)
T cd06613 140 VKLADFGVSAQLTATIA--KRKSFIGTPYWMAPEVA------AV------ERKGGYDGKCDIWALGITAIELAELQPPMF 205 (262)
T ss_pred EEECccccchhhhhhhh--ccccccCCccccCchhh------cc------cccCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 56774 4444432211 13457899999999998 32 00125678999999999999999999 997
Q ss_pred hhhhhhee-eccccccCcchhhcc-hhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 91 KELIDYIR-CVSTKASDDNIACLG-MYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
........ ... ... .+..... ....+ ..+.+++.+||..+|..||+..++..
T Consensus 206 ~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~--------~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 206 DLHPMRALFLIS---------KSNFPPPKLKD-KEKWS--------PVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCCHHHHHHHHH---------hccCCCccccc-hhhhh--------HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 65433111 000 000 0000000 01111 13778999999999999999877643
No 495
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.07 E-value=1.4e-08 Score=91.91 Aligned_cols=240 Identities=17% Similarity=0.230 Sum_probs=158.9
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC-CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 362 (538)
.+..+++|.+.|++....|..+ -+++.+.|.++++|--+. ++.-..+..... ....+.+.......|++|-..|
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~-gv~~~s~drtvrv~lkrds~q~wpsI~~~mP----~~~~~~~y~~e~~~L~vg~~ng 90 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEE-GVISVSEDRTVRVWLKRDSGQYWPSIYHYMP----SPCSAMEYVSESRRLYVGQDNG 90 (404)
T ss_pred hhhhhcCchhhhhhheeccCCC-CeEEccccceeeeEEeccccccCchhhhhCC----CCceEeeeeccceEEEEEEecc
Confidence 4566788988888888777544 458999999999995433 222222222211 2223455666677999999999
Q ss_pred cEEEEECC----CCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 009274 363 TIKAWSLL----DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (538)
Q Consensus 363 ~i~iwd~~----~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (538)
++.-+.+. .....+....|...|..+-|+ ...+++.+.|..+.---.+.+..+........... +.+. -
T Consensus 91 tvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~---~~~d--~ 165 (404)
T KOG1409|consen 91 TVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASA---LQFD--A 165 (404)
T ss_pred eEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCC---Ccee--e
Confidence 99988664 344556667899999999999 66999999998776555555544332221111000 0111 1
Q ss_pred CEEEEEeCCCcEEEEe----CCcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCC
Q 009274 437 HTLVVSHESGSIKVWR----NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGS 510 (538)
Q Consensus 437 ~~l~~~~~dg~i~iwd----~~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 510 (538)
.+...|...|.|..-. .-.++.++.+|.+.+.+++| ..+.|.+|..|..+.+||+-..+........ +..
T Consensus 166 ~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~g----h~~ 241 (404)
T KOG1409|consen 166 LYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQG----HND 241 (404)
T ss_pred EEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeecc----chh
Confidence 1556666777776654 23578889999999999999 4568999999999999999876543322211 111
Q ss_pred ceEEEEEe--CCEEEEEECCCeEEEEEcC
Q 009274 511 VITALLYW--QGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 511 ~~~~~~~~--~~~l~sg~~dg~v~vw~~~ 537 (538)
.+..+..- -.++++++.||.|.+|+++
T Consensus 242 kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 242 KVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred hhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 22222222 3469999999999999986
No 496
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.07 E-value=1.7e-10 Score=109.99 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=76.4
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+.+|++ |+++.+...... .......|+..|+|||++ .+ ..+++++|||||||++|+|+|+.
T Consensus 146 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~------~~---------~~~~~~~Di~slG~il~ellt~~~ 210 (284)
T cd05079 146 HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL------IQ---------SKFYIASDVWSFGVTLYELLTYCD 210 (284)
T ss_pred CCEEECCCccccccccCccceeecCCCCCCccccCHHHh------cc---------CCCCccccchhhhhhhhhhhcCCC
Confidence 457887 566665443221 112356788899999998 33 56778999999999999999988
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHH-HHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
|+............ ... ............... ...........+.+++.+||+.+|++||+..++.+.+..+
T Consensus 211 ~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 211 SESSPMTLFLKMIG-PTH-----GQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCccccchhhhhcc-ccc-----ccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 55432111000000 000 000000000000000 0000111223588999999999999999999988876653
No 497
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.06 E-value=1.2e-10 Score=111.37 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=71.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+..... ......|++.|||||++ .+. ......++.++|||||||++|+|++|+ ||
T Consensus 166 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~~----~~~~~~~~~~~Di~slGvi~~el~~g~~p~ 233 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVI------ACE----QQYDYSYDARCDVWSLGITAIELGDGDPPL 233 (291)
T ss_pred CEEEeecccchhcccccc--cccCccCCccccChhhh------cCC----CCcccccCCccchHHHHHHHHHHhhCCCCC
Confidence 46787 45555443211 12347899999999998 220 001124678999999999999999999 99
Q ss_pred chhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
...... .+..+. ... ..... ........+.+++.+||..+|++||+..++..
T Consensus 234 ~~~~~~~~~~~~~---------~~~-~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 234 FDMHPVKTLFKIP---------RNP-PPTLL---------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCcHHHHHHHHh---------cCC-CCCCC---------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 765332 111000 000 00000 00011123778999999999999999887654
No 498
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.06 E-value=1.2e-10 Score=119.60 Aligned_cols=64 Identities=20% Similarity=0.283 Sum_probs=49.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+.+.... .....+||+.|||||++ .+ ..++.++|||||||+||||++|.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~ell~~~~ 366 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEIL------AG---------DGYCEITDIWSCGLILLDMLSHDF 366 (501)
T ss_pred CCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhh------cC---------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3467888 677776654322 23458999999999999 44 55788999999999999999998
Q ss_pred -ccc
Q 009274 88 -QFT 90 (538)
Q Consensus 88 -pf~ 90 (538)
||.
T Consensus 367 ~p~~ 370 (501)
T PHA03210 367 CPIG 370 (501)
T ss_pred CCcc
Confidence 554
No 499
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.06 E-value=1.2e-10 Score=109.94 Aligned_cols=116 Identities=16% Similarity=0.297 Sum_probs=70.6
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+.+ +++.+..... ......|++.|+|||++ .+ ....++.++|+||||+++|+|++|+ |
T Consensus 146 ~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~------~~-------~~~~~~~~~Dv~slGvvl~~l~~g~~p 210 (268)
T cd06624 146 GVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVI------DK-------GPRGYGAPADIWSLGCTIVEMATGKPP 210 (268)
T ss_pred CeEEEecchhheecccCCC--ccccCCCCccccChhhh------cc-------ccccCCchhhhHHHHHHHHHHHhCCCC
Confidence 3567874 4444432221 13456799999999998 22 1123678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .... ......+..+ ......+.+++.+||..+|.+||++.++..
T Consensus 211 ~~~~~~~~~~------------~~~~--~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 211 FIELGEPQAA------------MFKV--GMFKIHPEIP----ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CccccChhhh------------Hhhh--hhhccCCCCC----cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 8653221000 0000 0000000000 011223778999999999999999887654
No 500
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.06 E-value=1.2e-10 Score=114.61 Aligned_cols=63 Identities=19% Similarity=0.425 Sum_probs=48.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....||+.|+|||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 155 ~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~~l~~l~~g~~p 216 (353)
T cd07850 155 CTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMIRGTVL 216 (353)
T ss_pred CCEEEccCccceeCCCCCC---CCCCcccccccCHHHH------hC---------CCCCCchhhHhHHHHHHHHHHCCCC
Confidence 457888 55666544321 3457899999999998 33 45778999999999999999999 9
Q ss_pred cchh
Q 009274 89 FTKE 92 (538)
Q Consensus 89 f~~~ 92 (538)
|...
T Consensus 217 f~~~ 220 (353)
T cd07850 217 FPGT 220 (353)
T ss_pred CCCC
Confidence 9764
Done!