Query 009274
Match_columns 538
No_of_seqs 966 out of 4402
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 22:47:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 8.5E-39 2.9E-43 320.6 38.6 278 246-536 102-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 3.1E-38 1.1E-42 305.6 41.0 286 239-537 19-320 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 1.2E-37 4.1E-42 299.4 39.4 281 245-537 6-301 (304)
4 1got_B GT-beta; complex (GTP-b 100.0 5E-37 1.7E-41 299.9 43.6 281 244-535 47-340 (340)
5 4gqb_B Methylosome protein 50; 100.0 3.6E-37 1.2E-41 300.5 35.3 279 249-537 27-330 (344)
6 3iz6_a 40S ribosomal protein R 100.0 2.8E-37 9.5E-42 306.5 34.6 291 241-537 55-374 (380)
7 2pbi_B Guanine nucleotide-bind 100.0 3.6E-36 1.2E-40 295.4 41.6 282 244-535 56-354 (354)
8 4ery_A WD repeat-containing pr 100.0 3.7E-36 1.3E-40 290.1 39.9 284 242-537 13-311 (312)
9 2hes_X YDR267CP; beta-propelle 100.0 4.8E-36 1.6E-40 291.7 40.7 288 244-538 6-328 (330)
10 4g56_B MGC81050 protein; prote 100.0 1E-36 3.6E-41 299.5 35.7 281 248-537 38-342 (357)
11 1vyh_C Platelet-activating fac 100.0 1.6E-36 5.3E-41 304.2 35.7 265 220-492 109-410 (410)
12 3ow8_A WD repeat-containing pr 100.0 8.1E-36 2.8E-40 288.6 37.1 264 220-491 33-319 (321)
13 3frx_A Guanine nucleotide-bind 100.0 1.1E-35 3.8E-40 287.6 37.6 283 244-537 9-316 (319)
14 1nr0_A Actin interacting prote 100.0 4.9E-35 1.7E-39 308.6 42.9 310 219-537 147-566 (611)
15 1got_B GT-beta; complex (GTP-b 100.0 3.7E-35 1.3E-39 286.7 38.4 264 220-490 56-340 (340)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-35 1.3E-39 287.1 38.6 291 241-538 4-335 (345)
17 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.9E-35 3E-39 295.0 42.1 297 228-538 126-442 (445)
18 1nr0_A Actin interacting prote 100.0 8.7E-35 3E-39 306.7 43.6 302 222-537 21-396 (611)
19 1erj_A Transcriptional repress 100.0 2.6E-34 8.8E-39 286.5 39.1 277 247-537 59-388 (393)
20 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-33 4.2E-38 272.0 42.4 280 241-537 7-295 (313)
21 4gqb_B Methylosome protein 50; 100.0 9.2E-35 3.2E-39 283.5 32.9 267 221-496 32-334 (344)
22 4aow_A Guanine nucleotide-bind 100.0 7.9E-34 2.7E-38 276.8 39.5 287 243-538 29-337 (340)
23 3v7d_B Cell division control p 100.0 2.5E-33 8.6E-38 285.9 44.9 280 244-538 113-421 (464)
24 2xzm_R RACK1; ribosome, transl 100.0 7.2E-34 2.5E-38 277.9 39.0 282 244-537 13-339 (343)
25 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.3E-34 2.8E-38 287.8 40.6 276 246-537 112-390 (445)
26 2ymu_A WD-40 repeat protein; u 100.0 1.3E-33 4.3E-38 296.2 42.8 299 219-535 262-577 (577)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.6E-34 1.9E-38 278.8 37.4 273 220-496 17-338 (345)
28 3iz6_a 40S ribosomal protein R 100.0 2.5E-35 8.6E-40 292.4 27.3 275 220-495 67-377 (380)
29 2pbi_B Guanine nucleotide-bind 100.0 1.2E-33 4E-38 277.5 38.8 265 220-490 65-354 (354)
30 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-34 1.2E-38 289.7 34.6 272 247-537 128-413 (435)
31 3v7d_B Cell division control p 100.0 1.5E-32 5.2E-37 280.0 46.9 292 230-534 131-459 (464)
32 1sq9_A Antiviral protein SKI8; 100.0 1.1E-33 3.9E-38 282.1 37.4 292 245-537 9-394 (397)
33 1gxr_A ESG1, transducin-like e 100.0 4.6E-33 1.6E-37 270.8 39.6 301 222-536 12-335 (337)
34 3frx_A Guanine nucleotide-bind 100.0 2.5E-33 8.5E-38 271.1 37.1 264 220-494 18-318 (319)
35 2ynn_A Coatomer subunit beta'; 100.0 4.4E-33 1.5E-37 267.5 37.7 267 220-494 14-303 (304)
36 3ei3_B DNA damage-binding prot 100.0 4.8E-33 1.6E-37 276.4 37.0 281 244-538 65-382 (383)
37 3vl1_A 26S proteasome regulato 100.0 3.9E-33 1.3E-37 280.5 36.6 309 223-538 60-419 (420)
38 2pm9_A Protein WEB1, protein t 100.0 2.6E-34 8.7E-39 288.6 27.9 313 222-538 15-414 (416)
39 2ymu_A WD-40 repeat protein; u 100.0 4.3E-32 1.5E-36 284.6 44.9 300 220-537 222-538 (577)
40 2hes_X YDR267CP; beta-propelle 100.0 7.6E-33 2.6E-37 269.0 35.8 266 221-493 16-328 (330)
41 4ery_A WD repeat-containing pr 100.0 1.8E-32 6E-37 264.3 37.9 267 220-492 24-311 (312)
42 1r5m_A SIR4-interacting protei 100.0 2.1E-32 7E-37 275.1 39.4 307 221-537 47-424 (425)
43 1erj_A Transcriptional repress 100.0 1.3E-32 4.5E-37 274.1 36.6 264 220-493 65-389 (393)
44 2xzm_R RACK1; ribosome, transl 100.0 4.1E-32 1.4E-36 265.4 39.4 265 221-494 23-341 (343)
45 4g56_B MGC81050 protein; prote 100.0 3E-33 1E-37 274.8 30.9 268 220-495 43-345 (357)
46 3zwl_B Eukaryotic translation 100.0 1.5E-31 5.3E-36 263.4 41.7 281 242-537 22-345 (369)
47 3gre_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 281.9 30.1 290 243-535 53-437 (437)
48 3dm0_A Maltose-binding peripla 100.0 5.1E-32 1.7E-36 290.2 40.1 284 245-538 375-693 (694)
49 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-32 1.5E-36 274.3 36.3 258 229-497 141-418 (435)
50 4e54_B DNA damage-binding prot 100.0 7E-33 2.4E-37 280.0 30.0 283 247-538 114-430 (435)
51 2pm7_B Protein transport prote 100.0 3.9E-32 1.3E-36 260.0 33.4 243 246-493 3-285 (297)
52 1k8k_C P40, ARP2/3 complex 41 100.0 8.1E-32 2.8E-36 266.0 36.2 283 248-537 4-360 (372)
53 3i2n_A WD repeat-containing pr 100.0 8.3E-32 2.8E-36 264.3 34.1 290 242-538 8-353 (357)
54 3dwl_C Actin-related protein 2 100.0 4.1E-33 1.4E-37 276.2 23.5 238 248-492 7-280 (377)
55 3k26_A Polycomb protein EED; W 100.0 1.5E-32 5.2E-37 270.4 27.2 284 247-538 13-366 (366)
56 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-31 1E-35 302.9 41.6 307 219-537 615-1073(1249)
57 3k26_A Polycomb protein EED; W 100.0 1.2E-31 4.1E-36 263.9 31.0 269 220-492 19-365 (366)
58 3zwl_B Eukaryotic translation 100.0 6.7E-30 2.3E-34 251.6 42.0 271 220-495 33-348 (369)
59 3dm0_A Maltose-binding peripla 100.0 6.8E-31 2.3E-35 281.5 37.2 267 219-492 382-692 (694)
60 3vl1_A 26S proteasome regulato 100.0 8.7E-32 3E-36 270.6 28.1 274 253-537 57-364 (420)
61 4aez_A CDC20, WD repeat-contai 100.0 1.4E-30 4.8E-35 260.3 36.3 281 244-537 83-379 (401)
62 1pgu_A Actin interacting prote 100.0 6.1E-30 2.1E-34 270.1 42.7 310 219-538 160-614 (615)
63 3bg1_A Protein SEC13 homolog; 100.0 5.3E-32 1.8E-36 261.4 24.0 241 247-492 8-292 (316)
64 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-30 8.6E-35 255.3 36.3 271 220-495 9-363 (372)
65 1r5m_A SIR4-interacting protei 100.0 3.5E-30 1.2E-34 258.8 37.0 278 245-537 38-360 (425)
66 4aow_A Guanine nucleotide-bind 100.0 1.4E-29 4.7E-34 246.8 39.7 267 220-495 39-339 (340)
67 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-31 3.6E-36 275.2 25.4 228 262-493 173-428 (524)
68 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-30 8.6E-35 282.4 37.9 281 245-537 6-301 (814)
69 2oaj_A Protein SNI1; WD40 repe 100.0 7.2E-30 2.5E-34 279.2 41.3 189 221-415 19-246 (902)
70 1yfq_A Cell cycle arrest prote 100.0 4.3E-30 1.5E-34 250.6 35.1 268 248-530 7-315 (342)
71 1sq9_A Antiviral protein SKI8; 100.0 5.5E-30 1.9E-34 255.4 35.2 271 220-494 17-396 (397)
72 4gga_A P55CDC, cell division c 100.0 2.8E-29 9.5E-34 252.5 39.9 265 219-495 105-397 (420)
73 4a11_B DNA excision repair pro 100.0 5.5E-30 1.9E-34 256.0 34.6 281 246-538 37-365 (408)
74 3i2n_A WD repeat-containing pr 100.0 3.2E-30 1.1E-34 253.0 31.7 273 220-495 19-355 (357)
75 2oaj_A Protein SNI1; WD40 repe 100.0 1E-29 3.5E-34 278.1 38.9 312 221-536 100-659 (902)
76 3dw8_B Serine/threonine-protei 100.0 3.8E-30 1.3E-34 260.8 32.2 244 251-498 27-378 (447)
77 4aez_A CDC20, WD repeat-contai 100.0 1E-29 3.5E-34 254.0 34.5 259 231-499 103-386 (401)
78 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-29 5.4E-34 246.6 33.5 245 248-496 7-340 (351)
79 3dwl_C Actin-related protein 2 100.0 9.9E-31 3.4E-35 259.0 24.9 265 221-491 13-377 (377)
80 1gxr_A ESG1, transducin-like e 100.0 1.8E-29 6.1E-34 245.4 33.3 276 251-537 8-295 (337)
81 4h5i_A Guanine nucleotide-exch 100.0 7.9E-30 2.7E-34 251.1 31.0 276 253-537 15-342 (365)
82 3mmy_A MRNA export factor; mRN 100.0 1.3E-29 4.5E-34 249.4 32.2 279 244-535 31-343 (368)
83 4a11_B DNA excision repair pro 100.0 3E-29 1E-33 250.6 35.1 306 219-537 43-404 (408)
84 4ggc_A P55CDC, cell division c 100.0 8.6E-29 2.9E-33 238.7 37.0 269 255-538 28-315 (318)
85 2pm9_A Protein WEB1, protein t 100.0 2E-30 6.8E-35 260.2 26.1 276 253-537 13-336 (416)
86 4gga_A P55CDC, cell division c 100.0 8.2E-29 2.8E-33 249.1 37.8 267 254-537 107-394 (420)
87 1pgu_A Actin interacting prote 100.0 4.4E-29 1.5E-33 263.5 36.4 283 249-537 15-327 (615)
88 3sfz_A APAF-1, apoptotic pepti 100.0 4.9E-29 1.7E-33 284.6 39.5 313 218-537 656-1115(1249)
89 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-28 7.2E-33 235.3 38.0 262 220-498 19-301 (313)
90 3jrp_A Fusion protein of prote 100.0 3.1E-29 1.1E-33 247.9 30.5 245 245-537 4-286 (379)
91 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-28 8.5E-33 266.6 40.6 267 221-494 15-303 (814)
92 3gre_A Serine/threonine-protei 100.0 4.5E-29 1.5E-33 252.3 30.3 267 219-490 63-437 (437)
93 3ei3_B DNA damage-binding prot 100.0 9.7E-29 3.3E-33 245.3 32.0 262 220-493 74-382 (383)
94 4ggc_A P55CDC, cell division c 100.0 9.3E-28 3.2E-32 231.4 38.1 260 223-494 29-316 (318)
95 2pm7_B Protein transport prote 100.0 2E-28 6.8E-33 234.1 33.0 231 220-454 10-284 (297)
96 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-29 3.9E-34 260.1 25.9 256 232-494 174-518 (524)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-29 1.7E-33 249.2 27.4 276 256-537 38-341 (402)
98 3bg1_A Protein SEC13 homolog; 100.0 5.8E-29 2E-33 240.0 26.3 231 220-454 14-292 (316)
99 4h5i_A Guanine nucleotide-exch 100.0 1.2E-27 3.9E-32 235.7 33.8 267 219-494 14-344 (365)
100 2xyi_A Probable histone-bindin 100.0 4.1E-28 1.4E-32 244.6 30.4 253 239-495 115-412 (430)
101 1yfq_A Cell cycle arrest prote 100.0 7E-27 2.4E-31 227.8 37.0 262 219-491 11-322 (342)
102 4e54_B DNA damage-binding prot 100.0 3.1E-28 1E-32 246.0 27.2 268 221-496 121-433 (435)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.7E-27 1.9E-31 237.8 34.9 273 253-537 5-390 (450)
104 2aq5_A Coronin-1A; WD40 repeat 100.0 7E-28 2.4E-32 240.8 27.3 254 237-498 53-347 (402)
105 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-27 1.1E-31 231.6 30.8 277 244-537 11-335 (355)
106 3jro_A Fusion protein of prote 100.0 5.9E-28 2E-32 260.3 24.8 243 246-493 3-285 (753)
107 3dw8_B Serine/threonine-protei 100.0 6.6E-27 2.2E-31 236.9 28.7 268 219-492 28-445 (447)
108 3f3f_A Nucleoporin SEH1; struc 100.0 3.8E-26 1.3E-30 222.5 32.3 245 286-537 5-336 (351)
109 2w18_A PALB2, fancn, partner a 100.0 1.8E-26 6.2E-31 216.9 28.5 267 264-537 56-356 (356)
110 3mmy_A MRNA export factor; mRN 100.0 4.4E-26 1.5E-30 224.1 32.5 265 218-492 38-345 (368)
111 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-26 4.3E-31 226.5 28.3 225 262-495 48-294 (343)
112 3jrp_A Fusion protein of prote 100.0 7.7E-26 2.6E-30 223.5 34.0 231 220-454 12-286 (379)
113 2j04_A TAU60, YPL007P, hypothe 100.0 4.8E-27 1.7E-31 234.9 24.6 256 250-537 13-296 (588)
114 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-25 9.3E-30 225.5 37.1 239 250-492 100-390 (450)
115 3lrv_A PRE-mRNA-splicing facto 100.0 4.8E-26 1.6E-30 222.4 28.0 259 229-495 46-335 (343)
116 3vu4_A KMHSV2; beta-propeller 99.9 3.4E-25 1.2E-29 217.2 32.8 258 219-493 19-336 (355)
117 1l0q_A Surface layer protein; 99.9 6.5E-24 2.2E-28 211.0 39.9 245 243-500 23-282 (391)
118 2xyi_A Probable histone-bindin 99.9 6.4E-25 2.2E-29 221.3 31.8 257 274-537 109-409 (430)
119 1l0q_A Surface layer protein; 99.9 4.3E-24 1.5E-28 212.3 35.9 258 263-537 3-274 (391)
120 3jro_A Fusion protein of prote 99.9 7E-26 2.4E-30 244.2 22.6 246 286-537 3-284 (753)
121 2j04_A TAU60, YPL007P, hypothe 99.9 1.3E-25 4.3E-30 224.7 21.1 250 222-492 18-296 (588)
122 3bws_A Protein LP49; two-domai 99.9 1E-23 3.5E-28 212.6 35.0 278 243-538 114-432 (433)
123 2w18_A PALB2, fancn, partner a 99.9 2.9E-24 1E-28 201.9 28.6 180 270-453 155-355 (356)
124 4gq1_A NUP37; propeller, trans 99.9 9.3E-25 3.2E-29 217.3 26.5 227 302-536 98-387 (393)
125 4gq1_A NUP37; propeller, trans 99.9 3.9E-25 1.3E-29 220.0 23.0 224 226-452 96-386 (393)
126 3bws_A Protein LP49; two-domai 99.9 2E-23 6.9E-28 210.4 33.2 259 224-493 127-432 (433)
127 1nir_A Nitrite reductase; hemo 99.9 4.4E-20 1.5E-24 190.5 32.1 303 229-538 147-514 (543)
128 1nir_A Nitrite reductase; hemo 99.9 1.4E-19 4.8E-24 186.7 27.9 262 262-538 149-458 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.1E-19 7E-24 179.8 27.6 267 255-537 65-386 (415)
130 1pby_B Quinohemoprotein amine 99.8 5.1E-19 1.7E-23 171.5 27.9 262 263-537 2-309 (337)
131 3vgz_A Uncharacterized protein 99.8 8E-18 2.7E-22 164.3 34.0 270 253-528 41-334 (353)
132 3u4y_A Uncharacterized protein 99.8 3.5E-18 1.2E-22 165.4 30.7 270 262-538 10-304 (331)
133 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.3E-18 4.5E-23 173.9 28.2 239 247-498 112-392 (415)
134 1ri6_A Putative isomerase YBHE 99.8 1.7E-17 5.9E-22 161.1 30.2 264 264-536 7-306 (343)
135 1ri6_A Putative isomerase YBHE 99.8 8.7E-17 3E-21 156.0 34.5 243 249-496 34-313 (343)
136 2ecf_A Dipeptidyl peptidase IV 99.8 8.2E-18 2.8E-22 181.5 26.4 272 252-537 36-412 (741)
137 2z3z_A Dipeptidyl aminopeptida 99.8 6.5E-17 2.2E-21 173.4 31.1 275 253-537 82-434 (706)
138 2ecf_A Dipeptidyl peptidase IV 99.8 4.1E-17 1.4E-21 176.0 29.0 306 220-536 37-457 (741)
139 3omv_A RAF proto-oncogene seri 99.8 3E-20 1E-24 175.2 2.2 127 11-165 168-298 (307)
140 2ojh_A Uncharacterized protein 99.8 4.5E-17 1.5E-21 154.3 23.9 221 267-498 17-263 (297)
141 3o4h_A Acylamino-acid-releasin 99.8 6.5E-17 2.2E-21 169.3 25.9 259 252-536 21-313 (582)
142 3u4y_A Uncharacterized protein 99.8 4.6E-16 1.6E-20 150.4 29.3 241 246-497 34-308 (331)
143 3hfq_A Uncharacterized protein 99.8 5.5E-16 1.9E-20 151.1 29.5 256 241-497 28-323 (347)
144 1k32_A Tricorn protease; prote 99.8 9.4E-16 3.2E-20 171.4 35.1 300 221-537 54-460 (1045)
145 3vgz_A Uncharacterized protein 99.8 2E-15 6.7E-20 147.2 32.9 222 253-484 89-335 (353)
146 4aoj_A High affinity nerve gro 99.8 5.3E-19 1.8E-23 169.1 6.1 123 11-169 194-321 (329)
147 4aw0_A HPDK1, 3-phosphoinositi 99.7 2.3E-19 7.8E-24 168.7 2.9 113 11-159 168-283 (311)
148 1jmx_B Amine dehydrogenase; ox 99.7 2.8E-16 9.5E-21 153.0 24.9 239 258-502 5-334 (349)
149 2oit_A Nucleoporin 214KDA; NH2 99.7 1.9E-16 6.4E-21 158.9 24.1 200 252-455 36-278 (434)
150 4g3f_A NF-kappa-beta-inducing 99.7 1.4E-19 4.8E-24 172.3 1.0 121 13-166 189-315 (336)
151 1k32_A Tricorn protease; prote 99.7 3.2E-16 1.1E-20 175.2 27.6 274 246-536 197-500 (1045)
152 2ojh_A Uncharacterized protein 99.7 2.7E-16 9.3E-21 148.8 23.0 229 247-484 36-293 (297)
153 4b9d_A Serine/threonine-protei 99.7 3.2E-19 1.1E-23 170.7 2.3 113 11-160 161-276 (350)
154 2oit_A Nucleoporin 214KDA; NH2 99.7 3.5E-16 1.2E-20 157.0 23.6 185 221-412 38-279 (434)
155 1xfd_A DIP, dipeptidyl aminope 99.7 3.6E-16 1.2E-20 168.1 25.4 243 248-493 53-393 (723)
156 3scy_A Hypothetical bacterial 99.7 2E-14 6.7E-19 140.8 35.6 244 251-497 48-343 (361)
157 4asz_A BDNF/NT-3 growth factor 99.7 7E-19 2.4E-23 165.9 3.4 120 11-166 164-288 (299)
158 2z3z_A Dipeptidyl aminopeptida 99.7 2.7E-16 9.2E-21 168.6 23.5 266 255-536 28-389 (706)
159 3fpq_A Serine/threonine-protei 99.7 3.7E-19 1.3E-23 166.5 1.0 110 12-160 169-282 (290)
160 4gt4_A Tyrosine-protein kinase 99.7 9.7E-19 3.3E-23 165.6 3.8 118 11-164 181-303 (308)
161 3hyh_A Carbon catabolite-derep 99.7 1.1E-18 3.9E-23 161.7 4.1 111 11-160 148-262 (275)
162 4ase_A Vascular endothelial gr 99.7 1.7E-18 5.8E-23 166.9 5.2 122 11-167 221-347 (353)
163 1xfd_A DIP, dipeptidyl aminope 99.7 2.5E-16 8.6E-21 169.3 22.5 272 255-537 19-392 (723)
164 1pby_B Quinohemoprotein amine 99.7 1.9E-15 6.6E-20 146.1 26.5 232 254-501 35-318 (337)
165 4fih_A Serine/threonine-protei 99.7 1.3E-18 4.5E-23 166.1 3.9 115 11-160 206-323 (346)
166 3ubd_A Ribosomal protein S6 ki 99.7 9.8E-19 3.3E-23 164.4 2.9 108 11-156 162-272 (304)
167 3hfq_A Uncharacterized protein 99.7 1.3E-14 4.3E-19 141.4 31.8 260 271-537 15-316 (347)
168 3o4h_A Acylamino-acid-releasin 99.7 1.6E-15 5.4E-20 158.8 26.4 256 222-493 24-315 (582)
169 4fie_A Serine/threonine-protei 99.7 9.3E-18 3.2E-22 164.4 5.5 115 11-160 283-400 (423)
170 3hmm_A TGF-beta receptor type- 99.7 1.3E-17 4.3E-22 158.4 2.7 139 11-167 144-297 (303)
171 3scy_A Hypothetical bacterial 99.7 2.9E-13 9.8E-18 132.5 33.9 259 270-537 25-336 (361)
172 4g31_A Eukaryotic translation 99.7 1.5E-17 5.1E-22 157.0 1.7 113 11-160 154-279 (299)
173 1z68_A Fibroblast activation p 99.6 1.2E-14 3.9E-19 156.3 21.3 267 257-537 20-390 (719)
174 1q7f_A NHL, brain tumor CG1071 99.6 1E-12 3.5E-17 124.0 31.0 237 249-494 26-281 (286)
175 1jmx_B Amine dehydrogenase; ox 99.6 1.9E-14 6.6E-19 139.8 19.1 221 299-537 6-324 (349)
176 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.6E-13 2.2E-17 130.2 29.7 265 264-537 4-340 (365)
177 1jof_A Carboxy-CIS,CIS-muconat 99.6 5.3E-13 1.8E-17 130.8 28.9 244 251-496 38-344 (365)
178 3pe7_A Oligogalacturonate lyas 99.6 3.8E-13 1.3E-17 132.9 27.7 287 244-536 22-380 (388)
179 3azo_A Aminopeptidase; POP fam 99.6 4.6E-13 1.6E-17 142.3 29.8 280 247-535 18-364 (662)
180 1z68_A Fibroblast activation p 99.6 5.6E-14 1.9E-18 150.9 21.0 264 226-493 22-391 (719)
181 1q7f_A NHL, brain tumor CG1071 99.6 3.7E-12 1.3E-16 120.1 30.4 237 291-537 28-279 (286)
182 4b99_A Mitogen-activated prote 99.6 8.8E-16 3E-20 150.7 5.4 135 11-160 194-344 (398)
183 3fvz_A Peptidyl-glycine alpha- 99.6 1.6E-12 5.5E-17 125.4 28.2 237 253-493 24-322 (329)
184 3uto_A Twitchin; kinase, muscl 99.6 2.8E-16 9.6E-21 162.1 1.1 113 12-160 294-410 (573)
185 3q7m_A Lipoprotein YFGL, BAMB; 99.6 7.8E-12 2.7E-16 123.0 33.0 288 233-535 64-375 (376)
186 3v5w_A G-protein coupled recep 99.6 9.7E-16 3.3E-20 157.2 4.8 108 11-155 328-439 (689)
187 4f9c_A Cell division cycle 7-r 99.5 2.7E-15 9.3E-20 145.6 5.3 46 32-91 203-249 (361)
188 4a5s_A Dipeptidyl peptidase 4 99.5 4.6E-12 1.6E-16 136.3 30.1 265 224-495 21-402 (740)
189 2oiz_A Aromatic amine dehydrog 99.5 2.3E-12 7.8E-17 125.9 24.8 255 270-537 29-333 (361)
190 2z2n_A Virginiamycin B lyase; 99.5 5.5E-10 1.9E-14 105.6 40.2 282 241-537 3-294 (299)
191 4a5s_A Dipeptidyl peptidase 4 99.5 1.2E-12 4.1E-17 140.8 23.7 234 255-498 19-358 (740)
192 2gop_A Trilobed protease; beta 99.5 1.1E-11 3.8E-16 120.3 28.1 254 255-536 17-329 (347)
193 3op5_A Serine/threonine-protei 99.5 1.6E-14 5.5E-19 141.6 7.0 130 11-167 190-329 (364)
194 3q7m_A Lipoprotein YFGL, BAMB; 99.5 2.3E-11 7.7E-16 119.7 29.5 267 258-537 49-336 (376)
195 2v62_A Serine/threonine-protei 99.5 1.7E-14 5.9E-19 140.2 6.3 126 13-165 191-326 (345)
196 3soa_A Calcium/calmodulin-depe 99.5 8E-15 2.7E-19 146.8 3.7 115 11-160 149-267 (444)
197 2izr_A Casein kinase I isoform 99.5 2.1E-14 7.3E-19 138.7 6.5 125 13-166 148-280 (330)
198 2oiz_A Aromatic amine dehydrog 99.5 1.1E-11 3.8E-16 121.0 25.8 244 245-500 44-343 (361)
199 3e5z_A Putative gluconolactona 99.5 3.4E-11 1.2E-15 114.1 28.5 239 246-496 21-289 (296)
200 3soc_A Activin receptor type-2 99.5 1.7E-14 5.7E-19 138.9 4.3 136 12-166 168-317 (322)
201 3uzp_A CKI-delta, CKID, casein 99.5 3.6E-14 1.2E-18 134.8 6.6 128 11-167 144-280 (296)
202 1csn_A Casein kinase-1; phosph 99.5 3.3E-14 1.1E-18 135.2 6.2 125 13-166 149-282 (298)
203 4hgt_A Casein kinase I isoform 99.5 4E-14 1.4E-18 134.6 6.7 127 11-166 144-279 (296)
204 3no2_A Uncharacterized protein 99.5 3E-11 1E-15 113.1 26.2 231 262-505 5-264 (276)
205 3p86_A Serine/threonine-protei 99.5 3.8E-14 1.3E-18 135.4 6.5 119 12-167 176-298 (309)
206 2yab_A Death-associated protei 99.5 1.2E-14 4.2E-19 141.6 3.1 112 13-160 157-272 (361)
207 4eqm_A Protein kinase; transfe 99.5 1.2E-14 4.1E-19 137.9 2.6 124 12-167 148-275 (294)
208 2y0a_A Death-associated protei 99.5 1.7E-14 5.7E-19 139.1 3.0 112 13-160 156-271 (326)
209 3pe7_A Oligogalacturonate lyas 99.4 8.3E-12 2.9E-16 123.2 22.4 255 275-537 13-328 (388)
210 3lb7_A RAF proto-oncogene seri 99.4 1.4E-14 4.7E-19 138.4 2.0 127 12-166 169-299 (307)
211 3dsm_A Uncharacterized protein 99.4 7.6E-11 2.6E-15 113.5 28.3 238 253-500 44-308 (328)
212 3azo_A Aminopeptidase; POP fam 99.4 2.4E-11 8.3E-16 129.0 27.0 246 248-498 63-374 (662)
213 3fvz_A Peptidyl-glycine alpha- 99.4 1.9E-10 6.4E-15 110.9 30.7 203 250-454 88-321 (329)
214 2zmd_A Dual specificity protei 99.4 4.2E-14 1.4E-18 139.7 5.1 123 11-160 190-320 (390)
215 1tki_A Titin; serine kinase, m 99.4 1.7E-14 5.9E-19 138.6 2.2 115 11-160 140-257 (321)
216 2bdw_A Hypothetical protein K1 99.4 1.2E-14 4.2E-19 142.0 1.2 113 12-160 168-284 (362)
217 3dsm_A Uncharacterized protein 99.4 4.6E-11 1.6E-15 115.0 25.8 251 270-537 15-301 (328)
218 3dbq_A Dual specificity protei 99.4 2.6E-14 8.8E-19 138.9 2.8 124 11-161 143-274 (343)
219 3c5m_A Oligogalacturonate lyas 99.4 1.7E-11 5.7E-16 121.2 23.1 276 255-536 38-380 (396)
220 2xdw_A Prolyl endopeptidase; a 99.4 7.6E-11 2.6E-15 126.1 29.8 242 250-495 122-416 (710)
221 2psq_A Fibroblast growth facto 99.4 5.8E-14 2E-18 137.7 5.1 120 11-166 239-363 (370)
222 3fe3_A MAP/microtubule affinit 99.4 5.1E-14 1.8E-18 135.5 4.6 110 12-160 151-264 (328)
223 2qkw_B Protein kinase; three-h 99.4 1.3E-14 4.6E-19 139.6 0.1 129 12-166 176-314 (321)
224 3fxz_A Serine/threonine-protei 99.4 9.8E-14 3.3E-18 131.8 6.1 114 11-160 152-269 (297)
225 4dc2_A Protein kinase C IOTA t 99.4 8.6E-14 2.9E-18 136.9 5.6 114 12-155 190-307 (396)
226 3zgw_A Maternal embryonic leuc 99.4 5.5E-14 1.9E-18 136.1 3.8 113 12-160 145-260 (347)
227 1o6l_A RAC-beta serine/threoni 99.4 5.4E-14 1.9E-18 135.7 3.7 104 12-154 142-249 (337)
228 4euu_A Serine/threonine-protei 99.4 2E-13 7E-18 131.1 7.7 133 11-164 152-306 (319)
229 3c0i_A Peripheral plasma membr 99.4 4.9E-14 1.7E-18 137.3 3.3 113 13-160 171-286 (351)
230 2r5t_A Serine/threonine-protei 99.4 8.3E-14 2.9E-18 136.3 4.9 110 12-159 176-288 (373)
231 3txo_A PKC-L, NPKC-ETA, protei 99.4 3.9E-14 1.3E-18 137.6 2.4 106 12-155 161-269 (353)
232 3kex_A Receptor tyrosine-prote 99.4 7.6E-14 2.6E-18 134.5 4.2 121 12-168 152-277 (325)
233 3og7_A AKAP9-BRAF fusion prote 99.4 2.9E-14 9.8E-19 135.0 1.0 127 12-166 157-287 (289)
234 3l9p_A Anaplastic lymphoma kin 99.4 3.6E-14 1.2E-18 139.0 1.8 121 13-169 222-347 (367)
235 3vhe_A Vascular endothelial gr 99.4 1.2E-13 4E-18 135.3 5.3 121 11-166 229-354 (359)
236 2jii_A Serine/threonine-protei 99.4 1.9E-13 6.6E-18 133.2 6.8 124 13-167 199-336 (352)
237 2i0e_A Protein kinase C-beta I 99.4 1.1E-13 3.7E-18 134.5 4.7 106 12-155 158-266 (353)
238 2dg1_A DRP35, lactonase; beta 99.4 4.1E-10 1.4E-14 108.6 30.0 235 244-483 36-300 (333)
239 3g33_A Cell division protein k 99.4 2.7E-13 9.2E-18 129.6 7.3 123 12-160 157-296 (308)
240 3poz_A Epidermal growth factor 99.4 6.7E-14 2.3E-18 135.0 3.0 122 12-168 154-279 (327)
241 1xjd_A Protein kinase C, theta 99.4 8.5E-14 2.9E-18 134.7 3.6 108 12-159 155-268 (345)
242 2bkl_A Prolyl endopeptidase; m 99.4 3.3E-11 1.1E-15 128.6 23.9 242 250-498 118-402 (695)
243 2eva_A TAK1 kinase - TAB1 chim 99.4 1.3E-13 4.3E-18 131.7 4.5 115 13-166 144-262 (307)
244 2qr7_A Ribosomal protein S6 ki 99.4 7.2E-14 2.5E-18 135.3 2.5 114 13-160 158-277 (342)
245 3sv0_A Casein kinase I-like; t 99.4 2.3E-13 8E-18 137.4 6.3 128 11-167 142-278 (483)
246 4ejn_A RAC-alpha serine/threon 99.4 1.4E-13 4.9E-18 138.6 4.7 105 11-153 285-392 (446)
247 2vx3_A Dual specificity tyrosi 99.4 1.3E-13 4.4E-18 136.0 4.3 64 11-94 197-263 (382)
248 1rdq_E PKA C-alpha, CAMP-depen 99.4 1.4E-13 4.9E-18 133.6 4.5 102 11-154 177-282 (350)
249 2a2a_A Death-associated protei 99.4 1E-13 3.5E-18 133.3 3.4 112 13-160 157-272 (321)
250 1qks_A Cytochrome CD1 nitrite 99.4 6.3E-10 2.2E-14 114.4 31.4 262 263-537 168-476 (567)
251 1fot_A TPK1 delta, CAMP-depend 99.4 2E-13 6.8E-18 130.8 5.0 101 12-154 143-247 (318)
252 1nxk_A MAP kinase-activated pr 99.4 3.9E-14 1.3E-18 140.3 0.1 120 11-161 200-322 (400)
253 2w4o_A Calcium/calmodulin-depe 99.4 5.2E-14 1.8E-18 136.9 1.0 114 11-160 187-305 (349)
254 2x4f_A Myosin light chain kina 99.4 6.7E-14 2.3E-18 137.3 1.7 113 12-160 226-342 (373)
255 3dtc_A Mitogen-activated prote 99.4 1.8E-13 6E-18 128.3 4.5 115 11-164 152-270 (271)
256 3lzb_A Epidermal growth factor 99.4 1.3E-13 4.5E-18 132.8 3.7 122 12-168 154-279 (327)
257 2y7j_A Phosphorylase B kinase 99.4 1.4E-13 4.7E-18 134.8 3.8 119 12-160 237-359 (365)
258 3lm5_A Serine/threonine-protei 99.4 8.2E-14 2.8E-18 134.3 1.9 114 11-160 170-287 (327)
259 3a8x_A Protein kinase C IOTA t 99.4 2.3E-13 8E-18 131.9 5.0 114 12-155 147-264 (345)
260 3ttj_A Mitogen-activated prote 99.4 1.1E-13 3.6E-18 139.8 2.7 65 11-93 200-267 (464)
261 3s95_A LIMK-1, LIM domain kina 99.4 2.4E-13 8.2E-18 130.1 5.0 100 34-166 181-281 (310)
262 2dg1_A DRP35, lactonase; beta 99.4 2.4E-10 8E-15 110.2 26.2 230 253-495 6-265 (333)
263 3f3z_A Calcium/calmodulin-depe 99.4 1.1E-13 3.7E-18 130.2 2.5 113 11-160 145-261 (277)
264 3ork_A Serine/threonine protei 99.4 8.9E-14 3E-18 133.1 1.8 122 12-165 153-279 (311)
265 1rjb_A FL cytokine receptor; k 99.4 2.7E-13 9.3E-18 131.8 5.3 121 12-167 209-334 (344)
266 2nru_A Interleukin-1 receptor- 99.4 5.6E-13 1.9E-17 127.3 7.2 128 12-166 170-305 (307)
267 3c4z_A Rhodopsin kinase; Ser/T 99.4 1.6E-13 5.3E-18 140.1 3.5 112 11-156 325-439 (543)
268 3kk8_A Calcium/calmodulin depe 99.4 1.1E-13 3.8E-18 130.6 2.3 113 12-160 145-261 (284)
269 3lij_A Calcium/calmodulin depe 99.4 1.2E-13 4.1E-18 141.0 2.6 114 11-160 175-291 (494)
270 2xir_A Vascular endothelial gr 99.4 3.2E-13 1.1E-17 129.6 5.4 121 11-166 184-309 (316)
271 2i1m_A Macrophage colony-stimu 99.4 3.4E-13 1.2E-17 130.4 5.6 121 11-166 200-325 (333)
272 1t46_A HOMO sapiens V-KIT hard 99.4 3.3E-13 1.1E-17 129.3 5.3 120 12-166 182-306 (313)
273 1kob_A Twitchin; kinase, intra 99.4 6.8E-14 2.3E-18 137.6 0.5 113 12-160 188-304 (387)
274 3oz6_A Mitogen-activated prote 99.4 2.4E-13 8.1E-18 134.5 4.4 49 32-94 187-236 (388)
275 3tt0_A Basic fibroblast growth 99.4 2.7E-13 9.3E-18 133.7 4.8 120 11-166 227-351 (382)
276 3h4j_B AMPK kdaid, SNF1-like p 99.4 1.1E-13 3.8E-18 133.4 1.9 112 12-161 145-259 (336)
277 2c30_A Serine/threonine-protei 99.4 3E-13 1E-17 129.9 4.9 111 12-160 178-294 (321)
278 4f0f_A Serine/threonine-protei 99.4 1.4E-13 4.7E-18 130.2 2.5 116 13-164 167-286 (287)
279 3niz_A Rhodanese family protei 99.4 4.4E-13 1.5E-17 128.2 6.0 132 12-160 156-300 (311)
280 3hko_A Calcium/calmodulin-depe 99.4 2.1E-13 7.3E-18 132.6 3.7 117 13-160 208-330 (345)
281 3g2f_A Bone morphogenetic prot 99.4 2.9E-13 9.8E-18 131.1 4.6 138 12-166 157-317 (336)
282 2ivs_A Proto-oncogene tyrosine 99.4 2.1E-13 7.1E-18 130.8 3.5 119 12-166 187-310 (314)
283 3v8s_A RHO-associated protein 99.4 1.4E-13 4.8E-18 136.2 2.3 121 11-160 204-329 (410)
284 3e7e_A HBUB1, BUB1A, mitotic c 99.4 3.4E-13 1.2E-17 132.2 5.0 116 11-166 219-338 (365)
285 1q8y_A SR protein kinase; tran 99.4 7.1E-13 2.4E-17 130.4 7.3 62 12-93 175-239 (373)
286 3tki_A Serine/threonine-protei 99.4 1.5E-13 5.1E-18 132.2 2.2 117 12-160 142-261 (323)
287 2mad_H Methylamine dehydrogena 99.4 3.6E-09 1.2E-13 103.4 33.4 256 273-538 48-350 (373)
288 3qup_A Tyrosine-protein kinase 99.3 1.8E-13 6.3E-18 131.7 2.8 124 12-171 174-302 (323)
289 3c5m_A Oligogalacturonate lyas 99.3 3.9E-11 1.3E-15 118.6 19.7 229 257-496 85-387 (396)
290 3rgf_A Cyclin-dependent kinase 99.3 3.1E-13 1.1E-17 134.4 4.5 69 10-92 167-239 (405)
291 3kul_A Ephrin type-A receptor 99.3 2.4E-13 8.1E-18 130.9 3.4 122 12-169 188-315 (325)
292 1vzo_A Ribosomal protein S6 ki 99.3 3.4E-13 1.2E-17 131.5 4.5 112 12-154 196-310 (355)
293 3llt_A Serine/threonine kinase 99.3 1.4E-13 4.7E-18 134.8 1.6 63 11-93 198-263 (360)
294 3p1a_A MYT1 kinase, membrane-a 99.3 1.7E-13 5.8E-18 131.1 2.2 108 11-160 193-304 (311)
295 2acx_A G protein-coupled recep 99.3 2.2E-13 7.6E-18 139.3 3.2 108 12-154 323-433 (576)
296 1ob3_A PFPK5, cell division co 99.3 5.2E-13 1.8E-17 126.2 5.5 66 12-93 137-205 (288)
297 3q60_A ROP5B; pseudokinase, tr 99.3 5.6E-14 1.9E-18 138.1 -1.3 116 12-160 231-352 (371)
298 3uim_A Brassinosteroid insensi 99.3 1.6E-13 5.5E-18 132.3 1.9 131 12-166 171-310 (326)
299 4eut_A Serine/threonine-protei 99.3 8.2E-13 2.8E-17 130.8 6.9 136 11-167 152-309 (396)
300 4hcu_A Tyrosine-protein kinase 99.3 3.7E-13 1.3E-17 125.9 4.1 117 12-166 143-265 (269)
301 3pfq_A PKC-B, PKC-beta, protei 99.3 3.3E-13 1.1E-17 142.3 4.2 107 11-155 478-587 (674)
302 3bhy_A Death-associated protei 99.3 2.2E-13 7.4E-18 128.5 2.5 112 13-160 150-265 (283)
303 3gxj_A TGF-beta receptor type- 99.3 9.5E-14 3.3E-18 132.4 -0.1 134 12-166 145-296 (303)
304 2pmi_A Negative RE, cyclin-dep 99.3 4.7E-13 1.6E-17 128.4 4.7 129 12-160 145-293 (317)
305 4fr4_A YANK1, serine/threonine 99.3 2.8E-13 9.4E-18 132.8 3.1 111 12-155 152-265 (384)
306 3a62_A Ribosomal protein S6 ki 99.3 4.2E-13 1.4E-17 129.3 4.3 106 12-155 158-266 (327)
307 1wak_A Serine/threonine-protei 99.3 6.3E-13 2.2E-17 131.9 5.7 60 13-92 234-296 (397)
308 3kvw_A DYRK2, dual specificity 99.3 3.6E-13 1.2E-17 134.7 3.9 62 14-95 241-305 (429)
309 3nyv_A Calmodulin-domain prote 99.3 1.1E-13 3.9E-18 141.0 0.2 113 11-160 165-281 (484)
310 3mwu_A Calmodulin-domain prote 99.3 1.8E-13 6.2E-18 139.5 1.6 112 12-160 161-276 (486)
311 2eue_A Carbon catabolite derep 99.3 3.3E-13 1.1E-17 126.7 3.1 110 13-160 150-262 (275)
312 2h34_A Serine/threonine-protei 99.3 2.5E-13 8.7E-18 129.8 2.3 123 12-168 171-297 (309)
313 1luf_A Muscle-specific tyrosin 99.3 3.7E-13 1.2E-17 130.8 3.4 119 12-166 211-334 (343)
314 3q4u_A Activin receptor type-1 99.3 1.8E-13 6.3E-18 130.3 1.2 130 11-165 149-300 (301)
315 1j1b_A Glycogen synthase kinas 99.3 6.8E-13 2.3E-17 132.4 5.2 122 12-160 194-336 (420)
316 3is5_A Calcium-dependent prote 99.3 3.1E-13 1E-17 127.6 2.5 112 11-160 163-278 (285)
317 2eu9_A Dual specificity protei 99.3 4.4E-13 1.5E-17 130.9 3.7 63 11-93 178-243 (355)
318 2pvf_A Fibroblast growth facto 99.3 3.5E-13 1.2E-17 130.4 2.9 119 12-166 194-317 (334)
319 2xdw_A Prolyl endopeptidase; a 99.3 2E-09 6.7E-14 115.2 32.3 233 291-537 123-413 (710)
320 3kn6_A Ribosomal protein S6 ki 99.3 1.2E-13 3.9E-18 133.1 -0.5 121 13-160 147-270 (325)
321 2qc5_A Streptogramin B lactona 99.3 3.7E-08 1.3E-12 92.9 37.9 278 245-537 12-299 (300)
322 3i6u_A CDS1, serine/threonine- 99.3 1.7E-13 5.8E-18 136.7 0.6 118 12-160 279-399 (419)
323 2y94_A 5'-AMP-activated protei 99.3 5.1E-13 1.7E-17 134.6 4.1 111 12-160 153-266 (476)
324 1mp8_A Focal adhesion kinase 1 99.3 4.8E-13 1.6E-17 126.0 3.6 119 11-166 152-275 (281)
325 2a19_B Interferon-induced, dou 99.3 9.6E-13 3.3E-17 124.1 5.7 111 12-166 159-273 (284)
326 3byv_A Rhoptry kinase; malaria 99.3 8.1E-14 2.8E-18 137.2 -1.9 114 12-160 243-359 (377)
327 4aw2_A Serine/threonine-protei 99.3 6.1E-13 2.1E-17 132.7 4.3 122 11-160 211-338 (437)
328 1rwi_B Serine/threonine-protei 99.3 5.2E-10 1.8E-14 104.2 24.2 233 254-495 25-266 (270)
329 3dls_A PAS domain-containing s 99.3 4.2E-13 1.4E-17 129.7 3.0 105 12-160 167-274 (335)
330 3q5i_A Protein kinase; CDPK, m 99.3 3.5E-13 1.2E-17 137.9 2.6 111 13-160 187-301 (504)
331 4fvq_A Tyrosine-protein kinase 99.3 6.3E-13 2.1E-17 125.8 4.0 113 14-168 160-276 (289)
332 3cbl_A C-FES, proto-oncogene t 99.3 4.1E-13 1.4E-17 132.0 2.8 121 11-166 249-373 (377)
333 1u5q_A Serine/threonine protei 99.3 9.4E-13 3.2E-17 127.8 5.2 112 12-161 191-306 (348)
334 3fdn_A Serine/threonine-protei 99.3 7.6E-13 2.6E-17 124.5 4.5 110 12-161 146-258 (279)
335 2zv2_A Calcium/calmodulin-depe 99.3 5.5E-13 1.9E-17 126.7 3.5 114 12-160 174-292 (298)
336 2xrw_A Mitogen-activated prote 99.3 5.5E-13 1.9E-17 130.9 3.6 65 12-94 164-231 (371)
337 2ac3_A MAP kinase-interacting 99.3 4.3E-13 1.5E-17 128.7 2.7 132 13-160 152-295 (316)
338 2yfx_A Tyrosine-protein kinase 99.3 3.5E-13 1.2E-17 130.0 2.1 120 13-168 181-305 (327)
339 1z57_A Dual specificity protei 99.3 1.4E-12 4.7E-17 126.5 6.2 63 11-93 173-238 (339)
340 3cc6_A Protein tyrosine kinase 99.3 8.4E-13 2.9E-17 124.3 4.6 118 12-166 150-272 (281)
341 3kmu_A ILK, integrin-linked ki 99.3 1.7E-12 5.9E-17 121.4 6.6 100 34-166 167-269 (271)
342 2gop_A Trilobed protease; beta 99.3 1.5E-09 5E-14 105.2 27.7 224 253-495 59-332 (347)
343 4e7w_A Glycogen synthase kinas 99.3 5.8E-13 2E-17 131.7 3.5 123 11-160 178-321 (394)
344 3cek_A Dual specificity protei 99.3 5.1E-13 1.7E-17 128.0 3.0 121 11-160 162-292 (313)
345 1p4o_A Insulin-like growth fac 99.3 7E-13 2.4E-17 127.6 3.9 120 12-166 175-298 (322)
346 3mdy_A Bone morphogenetic prot 99.3 2.2E-12 7.6E-17 124.9 7.4 134 12-169 179-333 (337)
347 3e3p_A Protein kinase, putativ 99.3 9.6E-13 3.3E-17 128.7 4.9 127 11-160 168-314 (360)
348 3mtl_A Cell division protein k 99.3 8.8E-13 3E-17 126.9 4.5 128 12-160 137-281 (324)
349 3brb_A Proto-oncogene tyrosine 99.3 6.7E-13 2.3E-17 127.1 3.6 120 12-166 184-307 (313)
350 2z2n_A Virginiamycin B lyase; 99.3 3.3E-08 1.1E-12 93.2 36.2 234 250-495 54-297 (299)
351 1qcf_A Haematopoetic cell kina 99.3 8.6E-13 2.9E-17 133.1 4.4 119 11-166 320-443 (454)
352 2qol_A Ephrin receptor; recept 99.3 5.6E-13 1.9E-17 130.7 2.9 123 11-169 183-311 (373)
353 3dzo_A Rhoptry kinase domain; 99.3 8.7E-13 3E-17 131.3 4.2 111 12-159 248-362 (413)
354 3t9t_A Tyrosine-protein kinase 99.3 9.3E-13 3.2E-17 123.0 4.1 119 11-166 140-263 (267)
355 3fhr_A MAP kinase-activated pr 99.3 2.5E-13 8.5E-18 131.4 0.2 118 11-160 167-287 (336)
356 3gen_A Tyrosine-protein kinase 99.3 9.1E-13 3.1E-17 124.2 4.0 118 12-166 157-279 (283)
357 1mqb_A Ephrin type-A receptor 99.3 1.7E-12 5.7E-17 125.4 5.9 122 11-168 183-310 (333)
358 2bkl_A Prolyl endopeptidase; m 99.3 1.3E-09 4.4E-14 116.3 28.8 194 290-492 118-348 (695)
359 1u59_A Tyrosine-protein kinase 99.3 7.3E-13 2.5E-17 125.2 3.2 119 12-166 147-271 (287)
360 3gbz_A Kinase, CMGC CDK; ssgci 99.3 1.1E-12 3.6E-17 126.6 4.3 68 11-94 173-243 (329)
361 3lxl_A Tyrosine-protein kinase 99.3 4.4E-13 1.5E-17 129.2 1.7 131 12-167 164-303 (327)
362 1cm8_A Phosphorylated MAP kina 99.3 9.1E-13 3.1E-17 129.0 3.8 124 12-160 165-307 (367)
363 2wqm_A Serine/threonine-protei 99.3 5.3E-13 1.8E-17 127.7 2.1 120 11-166 172-296 (310)
364 2wtk_C Serine/threonine-protei 99.3 1.2E-12 4.3E-17 124.7 4.7 116 12-161 146-264 (305)
365 3uc3_A Serine/threonine-protei 99.3 6.3E-13 2.1E-17 129.8 2.4 110 14-161 157-275 (361)
366 2w5a_A Serine/threonine-protei 99.3 7.9E-13 2.7E-17 124.4 2.9 111 12-160 153-267 (279)
367 3sxs_A Cytoplasmic tyrosine-pr 99.3 8.7E-13 3E-17 123.3 3.2 118 12-166 141-263 (268)
368 2y4i_B KSR2, HKSR2, kinase sup 99.3 2.1E-12 7.3E-17 124.0 5.9 130 11-166 165-301 (319)
369 2vd5_A DMPK protein; serine/th 99.3 3.2E-13 1.1E-17 133.7 0.1 75 12-95 199-276 (412)
370 1yiq_A Quinohemoprotein alcoho 99.3 5.4E-09 1.8E-13 110.6 32.5 270 233-504 81-516 (689)
371 2ycf_A Serine/threonine-protei 99.3 7.2E-13 2.5E-17 127.5 2.6 117 12-160 154-274 (322)
372 1ua2_A CAK, cell division prot 99.3 2.2E-12 7.7E-17 125.3 6.0 125 12-160 149-291 (346)
373 3ll6_A Cyclin G-associated kin 99.3 7.7E-13 2.6E-17 128.1 2.6 120 12-166 175-307 (337)
374 1xbb_A Tyrosine-protein kinase 99.3 1.3E-12 4.4E-17 123.8 4.1 120 11-166 153-278 (291)
375 4exu_A Mitogen-activated prote 99.3 2.8E-12 9.6E-17 125.8 6.6 129 12-160 181-323 (371)
376 3mi9_A Cell division protein k 99.3 1.8E-12 6E-17 126.4 5.1 70 12-95 161-235 (351)
377 3kfa_A Tyrosine-protein kinase 99.3 1.2E-12 4.1E-17 123.8 3.7 118 12-166 148-270 (288)
378 2fst_X Mitogen-activated prote 99.3 2E-12 6.8E-17 126.5 5.4 130 12-160 169-311 (367)
379 3ugc_A Tyrosine-protein kinase 99.3 2.1E-12 7.1E-17 122.6 5.4 131 12-166 151-290 (295)
380 2jam_A Calcium/calmodulin-depe 99.3 3.7E-13 1.3E-17 128.4 0.1 112 12-160 146-261 (304)
381 4aaa_A Cyclin-dependent kinase 99.3 2.3E-12 7.7E-17 124.5 5.4 126 12-160 161-306 (331)
382 3c1x_A Hepatocyte growth facto 99.3 1.6E-12 5.6E-17 127.3 4.4 120 12-166 229-354 (373)
383 1fmk_A C-SRC, P60-SRC, tyrosin 99.3 1.4E-12 4.9E-17 131.3 4.0 119 11-166 316-439 (452)
384 1fvr_A Tyrosine-protein kinase 99.3 1E-12 3.5E-17 126.7 2.8 118 12-168 179-301 (327)
385 3qd2_B Eukaryotic translation 99.3 1.1E-12 3.8E-17 126.7 3.1 113 11-160 200-325 (332)
386 4agu_A Cyclin-dependent kinase 99.3 2.8E-12 9.7E-17 122.6 5.8 127 11-160 138-284 (311)
387 3a7i_A MST3 kinase, serine/thr 99.3 1.5E-12 5.2E-17 124.0 3.9 112 12-161 156-271 (303)
388 1byg_A CSK, protein (C-termina 99.3 1.2E-12 4.1E-17 123.1 3.0 115 11-166 153-272 (278)
389 3no2_A Uncharacterized protein 99.3 5.2E-09 1.8E-13 97.7 27.9 209 228-443 11-231 (276)
390 2vgo_A Serine/threonine-protei 99.3 1.6E-12 5.6E-17 122.6 3.9 108 12-160 151-262 (284)
391 1blx_A Cyclin-dependent kinase 99.3 4.1E-12 1.4E-16 122.4 6.8 130 12-160 157-296 (326)
392 3lxp_A Non-receptor tyrosine-p 99.3 8.1E-13 2.8E-17 126.8 1.8 130 12-166 171-309 (318)
393 1k9a_A Carboxyl-terminal SRC k 99.3 1.6E-12 5.5E-17 130.9 4.0 115 11-166 325-444 (450)
394 3qyz_A Mitogen-activated prote 99.3 3.4E-12 1.2E-16 124.9 6.2 134 12-160 165-313 (364)
395 1phk_A Phosphorylase kinase; g 99.3 8.4E-13 2.9E-17 125.5 1.6 119 12-160 161-283 (298)
396 1b6c_B TGF-B superfamily recep 99.3 9.8E-13 3.3E-17 127.7 2.1 132 12-167 184-336 (342)
397 2hz6_A Endoplasmic reticulum t 99.3 2E-13 6.9E-18 133.8 -2.9 256 259-536 6-277 (369)
398 1opk_A P150, C-ABL, proto-onco 99.3 1.5E-12 5.2E-17 132.6 3.5 119 11-166 354-477 (495)
399 2clq_A Mitogen-activated prote 99.3 2.3E-12 7.7E-17 122.3 4.5 116 11-160 159-278 (295)
400 2rio_A Serine/threonine-protei 99.3 2.1E-12 7.2E-17 129.4 4.4 125 12-160 165-295 (434)
401 1kb0_A Quinohemoprotein alcoho 99.3 6.3E-09 2.2E-13 109.9 31.1 269 232-504 87-518 (677)
402 4e5w_A Tyrosine-protein kinase 99.3 1.1E-12 3.8E-17 124.9 2.2 130 12-166 163-301 (302)
403 1qpc_A LCK kinase; alpha beta 99.3 1.8E-12 6E-17 122.0 3.3 118 12-166 146-268 (279)
404 1u46_A ACK-1, activated CDC42 99.2 2.4E-12 8.3E-17 121.8 4.3 120 12-166 158-283 (291)
405 3aln_A Dual specificity mitoge 99.2 1.7E-13 5.9E-18 132.1 -3.9 118 12-160 163-285 (327)
406 1t4h_A Serine/threonine-protei 99.2 9.1E-13 3.1E-17 124.7 1.0 110 12-160 169-282 (290)
407 3an0_A Dual specificity mitoge 99.2 4.6E-13 1.6E-17 129.9 -1.1 113 12-160 191-310 (340)
408 1qks_A Cytochrome CD1 nitrite 99.2 5.8E-08 2E-12 99.8 36.7 237 253-494 197-478 (567)
409 3eb0_A Putative uncharacterize 99.2 1.6E-12 5.5E-17 128.2 2.6 122 12-160 179-321 (383)
410 3f66_A Hepatocyte growth facto 99.2 2.7E-12 9.2E-17 122.0 4.1 120 12-166 165-290 (298)
411 1yr2_A Prolyl oligopeptidase; 99.2 1.3E-09 4.5E-14 117.1 25.3 241 251-497 161-445 (741)
412 3a99_A Proto-oncogene serine/t 99.2 1.4E-12 4.9E-17 125.2 2.0 104 12-160 187-293 (320)
413 3n9x_A Phosphotransferase; mal 99.2 2E-12 6.9E-17 129.5 3.0 65 12-90 166-253 (432)
414 3sjl_D Methylamine dehydrogena 99.2 7.1E-09 2.4E-13 100.1 27.6 256 271-537 58-362 (386)
415 2owb_A Serine/threonine-protei 99.2 2.7E-12 9.4E-17 124.1 3.9 110 12-160 178-291 (335)
416 2ozo_A Tyrosine-protein kinase 99.2 2.9E-12 9.8E-17 133.8 4.3 120 11-166 472-597 (613)
417 3pls_A Macrophage-stimulating 99.2 4.1E-12 1.4E-16 120.7 4.9 119 12-166 161-286 (298)
418 3eqc_A Dual specificity mitoge 99.2 2.5E-12 8.6E-17 125.8 3.5 64 12-94 169-235 (360)
419 2rku_A Serine/threonine-protei 99.2 2.7E-12 9.1E-17 121.7 3.6 111 12-161 152-266 (294)
420 3fme_A Dual specificity mitoge 99.2 6.8E-13 2.3E-17 125.6 -0.6 116 12-160 147-266 (290)
421 3o0g_A Cell division protein k 99.2 4.4E-12 1.5E-16 120.1 4.9 62 12-89 138-202 (292)
422 2r3i_A Cell division protein k 99.2 5.6E-12 1.9E-16 119.8 5.7 132 12-160 140-283 (299)
423 2yex_A Serine/threonine-protei 99.2 1.3E-12 4.4E-17 122.7 1.2 117 12-160 142-261 (276)
424 2x7f_A TRAF2 and NCK-interacti 99.2 4.8E-12 1.7E-16 121.9 5.2 116 12-160 166-286 (326)
425 3cok_A Serine/threonine-protei 99.2 1.8E-12 6.2E-17 121.8 2.1 110 12-160 149-262 (278)
426 3gni_B Strad alpha; kinase fol 99.2 3.9E-12 1.3E-16 125.8 4.6 47 34-93 194-241 (389)
427 3nsz_A CK II alpha, casein kin 99.2 3.5E-12 1.2E-16 123.1 4.1 62 13-91 169-233 (330)
428 4fl3_A Tyrosine-protein kinase 99.2 3.1E-12 1E-16 134.0 3.9 120 11-166 505-630 (635)
429 3coi_A Mitogen-activated prote 99.2 8E-12 2.8E-16 121.8 6.7 129 12-160 163-305 (353)
430 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.1E-08 3.7E-13 97.5 28.4 242 249-494 14-300 (314)
431 2wei_A Calmodulin-domain prote 99.2 1.3E-12 4.6E-17 123.4 0.9 111 13-160 162-276 (287)
432 3rp9_A Mitogen-activated prote 99.2 3.9E-12 1.3E-16 128.6 4.3 41 32-86 240-280 (458)
433 3com_A Serine/threonine-protei 99.2 9.8E-12 3.4E-16 119.0 6.9 113 12-160 162-278 (314)
434 3c75_H MADH, methylamine dehyd 99.2 6E-09 2E-13 102.5 26.5 257 272-538 99-402 (426)
435 1kb0_A Quinohemoprotein alcoho 99.2 4.3E-09 1.5E-13 111.1 27.2 270 260-538 75-507 (677)
436 3e5z_A Putative gluconolactona 99.2 4.6E-09 1.6E-13 99.3 24.6 230 281-529 16-278 (296)
437 2j0j_A Focal adhesion kinase 1 99.2 5.3E-12 1.8E-16 132.7 4.4 119 11-166 527-650 (656)
438 2h6d_A 5'-AMP-activated protei 99.2 2.8E-12 9.5E-17 120.4 2.1 111 12-161 148-262 (276)
439 2buj_A Serine/threonine-protei 99.2 2.9E-12 1E-16 122.9 2.1 104 33-166 201-305 (317)
440 2h8h_A Proto-oncogene tyrosine 99.2 5E-12 1.7E-16 130.0 4.0 119 11-166 399-522 (535)
441 2j7t_A Serine/threonine-protei 99.2 9.1E-12 3.1E-16 118.5 5.4 118 12-160 154-275 (302)
442 3p23_A Serine/threonine-protei 99.2 3.8E-12 1.3E-16 127.2 2.6 118 13-160 161-283 (432)
443 2w1i_A JAK2; chromosomal rearr 99.2 8.5E-12 2.9E-16 120.1 4.7 131 12-166 182-321 (326)
444 3pg1_A Mitogen-activated prote 99.2 1.1E-11 3.6E-16 121.4 5.2 124 12-160 171-316 (362)
445 2b9h_A MAP kinase FUS3, mitoge 99.2 8.5E-12 2.9E-16 121.6 4.5 134 12-160 149-305 (353)
446 1yr2_A Prolyl oligopeptidase; 99.2 1.1E-08 3.8E-13 109.8 29.0 233 291-537 161-440 (741)
447 2dyl_A Dual specificity mitoge 99.2 1.1E-11 3.6E-16 119.0 4.7 115 12-160 162-283 (318)
448 2iwi_A Serine/threonine-protei 99.2 8.8E-12 3E-16 119.3 3.6 104 12-160 177-283 (312)
449 1yiq_A Quinohemoprotein alcoho 99.2 9.2E-09 3.1E-13 108.9 26.7 270 260-538 68-505 (689)
450 3hrp_A Uncharacterized protein 99.1 8.8E-08 3E-12 94.8 31.6 233 253-491 131-408 (409)
451 2vwi_A Serine/threonine-protei 99.1 1.8E-12 6.2E-17 123.5 -2.4 124 12-160 158-287 (303)
452 2i6l_A Mitogen-activated prote 99.1 1.9E-11 6.4E-16 117.4 4.7 129 12-160 158-305 (320)
453 1x8b_A WEE1HU, WEE1-like prote 99.1 1.1E-11 3.9E-16 116.9 3.1 105 12-160 171-279 (289)
454 1rwi_B Serine/threonine-protei 99.1 1.5E-08 5E-13 94.3 23.8 193 253-455 67-264 (270)
455 1xip_A Nucleoporin NUP159; bet 99.1 2.3E-09 7.8E-14 104.0 17.0 171 254-443 39-232 (388)
456 2mad_H Methylamine dehydrogena 99.1 6.5E-07 2.2E-11 87.3 34.4 242 245-500 60-357 (373)
457 1xip_A Nucleoporin NUP159; bet 99.1 4.4E-09 1.5E-13 102.0 18.5 170 294-480 39-231 (388)
458 3hrp_A Uncharacterized protein 99.1 7.5E-07 2.6E-11 88.1 35.1 236 293-536 131-408 (409)
459 2pml_X PFPK7, Ser/Thr protein 99.1 2.9E-11 1E-15 117.5 2.6 123 12-160 189-322 (348)
460 2qc5_A Streptogramin B lactona 99.1 9.1E-07 3.1E-11 83.2 33.7 233 248-492 57-299 (300)
461 1zy4_A Serine/threonine-protei 99.1 2E-11 6.9E-16 116.1 1.1 95 32-160 187-283 (303)
462 3hxj_A Pyrrolo-quinoline quino 99.1 1.3E-09 4.3E-14 104.8 13.4 269 243-536 10-282 (330)
463 1kv9_A Type II quinohemoprotei 99.0 2.2E-07 7.6E-12 98.0 31.3 269 233-504 77-499 (668)
464 3hxj_A Pyrrolo-quinoline quino 99.0 6.3E-09 2.2E-13 99.9 17.1 267 244-536 51-322 (330)
465 3qa8_A MGC80376 protein; kinas 99.0 1.9E-11 6.5E-16 126.5 -0.7 62 13-92 162-226 (676)
466 3sjl_D Methylamine dehydrogena 99.0 3.6E-07 1.2E-11 88.2 27.8 250 242-503 69-373 (386)
467 2pzi_A Probable serine/threoni 99.0 1.1E-10 3.8E-15 123.8 3.4 101 13-162 219-323 (681)
468 1kv9_A Type II quinohemoprotei 99.0 1.5E-07 5E-12 99.4 26.5 269 260-537 64-487 (668)
469 2hz6_A Endoplasmic reticulum t 99.0 1.7E-10 5.7E-15 112.9 3.5 182 305-501 9-200 (369)
470 3iuj_A Prolyl endopeptidase; h 99.0 1E-07 3.5E-12 101.4 25.2 242 250-498 126-410 (693)
471 3dr2_A Exported gluconolactona 98.9 2.5E-07 8.6E-12 87.7 24.6 231 246-487 38-301 (305)
472 3g4e_A Regucalcin; six bladed 98.9 1E-06 3.6E-11 83.1 28.4 224 250-481 10-260 (297)
473 2ad6_A Methanol dehydrogenase 98.9 1.6E-06 5.5E-11 89.5 30.8 263 258-527 111-525 (571)
474 2ad6_A Methanol dehydrogenase 98.9 1.9E-06 6.4E-11 89.0 30.4 267 260-537 60-493 (571)
475 3g4e_A Regucalcin; six bladed 98.9 3.7E-06 1.3E-10 79.2 29.4 201 289-501 9-237 (297)
476 1flg_A Protein (quinoprotein e 98.9 2.2E-06 7.5E-11 88.6 29.9 270 234-505 80-528 (582)
477 3iuj_A Prolyl endopeptidase; h 98.9 9.4E-07 3.2E-11 94.0 27.9 196 291-496 127-362 (693)
478 1mda_H Methylamine dehydrogena 98.9 1.8E-07 6E-12 90.5 20.1 247 273-538 47-346 (368)
479 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 7.6E-07 2.6E-11 84.5 24.4 193 251-454 69-298 (314)
480 1w6s_A Methanol dehydrogenase 98.9 2.5E-06 8.6E-11 88.0 29.7 271 261-537 61-502 (599)
481 3nok_A Glutaminyl cyclase; bet 98.8 6.8E-07 2.3E-11 80.6 21.4 178 255-443 57-253 (268)
482 1w6s_A Methanol dehydrogenase 98.8 4E-06 1.4E-10 86.5 29.1 243 257-504 110-514 (599)
483 3nol_A Glutamine cyclotransfer 98.8 2.9E-06 1E-10 76.5 24.1 185 250-444 38-244 (262)
484 3c75_H MADH, methylamine dehyd 98.8 2.5E-06 8.4E-11 83.9 25.4 248 240-500 107-409 (426)
485 1flg_A Protein (quinoprotein e 98.8 7.9E-06 2.7E-10 84.4 30.2 271 260-537 66-515 (582)
486 2ghs_A AGR_C_1268P; regucalcin 98.8 9.9E-06 3.4E-10 77.4 28.8 218 255-481 51-290 (326)
487 3mbr_X Glutamine cyclotransfer 98.8 3.3E-06 1.1E-10 75.5 23.2 185 250-444 16-223 (243)
488 2qe8_A Uncharacterized protein 98.8 8.2E-07 2.8E-11 85.7 20.8 251 253-525 17-307 (343)
489 2iwa_A Glutamine cyclotransfer 98.7 6.3E-06 2.1E-10 75.3 25.3 192 254-454 22-236 (266)
490 3uqc_A Probable conserved tran 98.7 1.4E-09 4.7E-14 102.3 1.0 85 68-167 180-265 (286)
491 4a2l_A BT_4663, two-component 98.7 0.00016 5.3E-09 78.2 38.4 279 252-536 214-524 (795)
492 2ece_A 462AA long hypothetical 98.7 5.6E-05 1.9E-09 73.6 30.7 190 302-492 93-351 (462)
493 2ghs_A AGR_C_1268P; regucalcin 98.7 5.3E-05 1.8E-09 72.3 30.5 187 294-494 50-261 (326)
494 1mda_H Methylamine dehydrogena 98.6 4.9E-06 1.7E-10 80.3 21.8 243 240-501 54-354 (368)
495 1npe_A Nidogen, entactin; glyc 98.6 0.00015 5.2E-09 66.8 31.0 230 263-501 2-246 (267)
496 3dr2_A Exported gluconolactona 98.6 9.5E-06 3.3E-10 76.7 22.6 229 284-532 36-301 (305)
497 4a2l_A BT_4663, two-component 98.6 0.0002 6.7E-09 77.4 35.1 276 255-536 175-478 (795)
498 2ece_A 462AA long hypothetical 98.5 2.6E-05 8.9E-10 75.9 23.2 215 263-481 97-399 (462)
499 3m2w_A MAP kinase-activated pr 98.5 3.1E-08 1E-12 93.8 1.5 82 65-160 173-256 (299)
500 2qe8_A Uncharacterized protein 98.5 5.4E-06 1.9E-10 79.9 17.3 202 250-452 64-318 (343)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.5e-39 Score=320.63 Aligned_cols=278 Identities=23% Similarity=0.338 Sum_probs=235.2
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+.+|.++|++++|+ ++++++|+.||+|++||+.+++....+++|.+.|.+++|+|+ +.++++|+.|++|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS-GKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT-SSEEEEEETTSCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCC
Confidence 4578999999999999 899999999999999999999999999999999999999985 5588999999999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecC
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~d 401 (538)
+.... ..+..+.. .....+++|+++++++|+.|++|++||+++++++..+.+|...|.++.++ +.++++|+.|
T Consensus 181 ~~~~~---~~~~~h~~--~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 181 GFECI---RTMHGHDH--NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp SSCEE---ECCCCCSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcee---EEEcCCCC--CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 65432 22333322 23456888999999999999999999999999999999999999999999 5599999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCC--------------------CCEEEEEeCCCcEEEEeCC--cceee
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV--------------------QHTLVVSHESGSIKVWRND--KFMKS 459 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~dg~i~iwd~~--~~~~~ 459 (538)
++|++||+++++....+..+. ..+. +++|+|+ +.++++|+.|+.|++||.. .++..
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~-~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHR-HVVE-CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCS-SCEE-EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCceeeEecCCC-ceEE-EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999999888887653 3444 4688886 6789999999999999965 46778
Q ss_pred eccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CC-EEEEEECCCeEEEEE
Q 009274 460 MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QG-KLFVGCADRTVKVYY 535 (538)
Q Consensus 460 ~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~vw~ 535 (538)
+.+|...|.++.+ ++++|++|+.||.|++||+.+++....... +...+.++.+. ++ .|++|+.||+|++|+
T Consensus 334 ~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-----HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-----CSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC-----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 8999999999987 889999999999999999988776544432 33355666554 44 588999999999998
Q ss_pred c
Q 009274 536 Y 536 (538)
Q Consensus 536 ~ 536 (538)
+
T Consensus 409 ~ 409 (410)
T 1vyh_C 409 C 409 (410)
T ss_dssp -
T ss_pred C
Confidence 6
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=305.64 Aligned_cols=286 Identities=20% Similarity=0.323 Sum_probs=236.9
Q ss_pred cCCeEEEEEeecCCCcEEEEEEc------CCEEEEEeCCCcEEEEeCCCCce--EEEEecCCcCeEEEEEecCCCCEEEE
Q 009274 239 SKGNVKFKDLQGHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSH--VHTFKGHDHKVMAVVYVDEDQPLCIS 310 (538)
Q Consensus 239 ~~~~~~i~~l~~h~~~V~~l~~~------~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s 310 (538)
..-.+.+..+++|.++|++++|+ +++|+||+.|++|++||+.+++. ...+.+|...|.+++|+++ ..++++
T Consensus 19 ~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~-~~~l~s 97 (321)
T 3ow8_A 19 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT-LPIAAS 97 (321)
T ss_dssp --CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS-SSEEEE
T ss_pred hhhhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC-CCEEEE
Confidence 33455567788999999999996 46899999999999999987654 4568899999999999885 458899
Q ss_pred EcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE
Q 009274 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV 390 (538)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 390 (538)
++.|++|++||+.+++....+. .+.. .....+++|++++|++|+.||.|++||+++++....+..|...|.+++|
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~---~~~~--~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSID---AGPV--DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEE---CCTT--CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred EeCCCcEEEEECCCCCEEEEEe---CCCc--cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 9999999999998765433322 2211 1224689999999999999999999999999999999999999999999
Q ss_pred e--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccce
Q 009274 391 C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGS 466 (538)
Q Consensus 391 ~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~ 466 (538)
+ +++|++|+.|+.|++||+++++.+..+..+.. .+.. ++|+|++++|++|+.|+.|++||.+ +....+.+|...
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~-l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~ 250 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM-PIRS-LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW 250 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CCCE-EEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC-ceeE-EEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc
Confidence 9 56999999999999999999999988876643 3333 7999999999999999999999964 467788999999
Q ss_pred EEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 467 VFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 467 v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
|.+++| ++++|++++.|++|++||+.+++....... +...+..+.+ +++ .|++++.||.|++||..
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-----HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-----CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999987 899999999999999999999887665432 3334555555 444 58999999999999974
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-37 Score=299.36 Aligned_cols=281 Identities=18% Similarity=0.280 Sum_probs=228.6
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
...+.+|.+.|++++|+ +++|++|+.||+|++||+++++.+..+..|..+|.+++|+|+ +.++++|+.|++|++||+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEEEEEC
Confidence 35689999999999999 899999999999999999999999999999999999999995 558899999999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeC---CEEEEE
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCN---GVLYSG 398 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~---~~l~s~ 398 (538)
.++.... .+..+.. ....++++|+++++++|+.|++|++||++++ .....+.+|...|.+++|++ .+|++|
T Consensus 85 ~~~~~~~---~~~~h~~--~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 85 NTGEKVV---DFEAHPD--YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TTCCEEE---EEECCSS--CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCCcEEE---EEeCCCC--cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 8765433 3333332 2335688899999999999999999999887 45667899999999999983 489999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~-- 472 (538)
+.|++|++||++++.....+..++...+.. +.+.| ++.+|++|+.|++|++||.+ +++..+.+|...|.++.+
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEE-EEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEE-EEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 999999999999888777776555444443 46655 78899999999999999965 567889999999999887
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE-EeCCE--EEEEECCCeEEEEEcC
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL-YWQGK--LFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--l~sg~~dg~v~vw~~~ 537 (538)
++.+|++|+.||+|++||+.+.+....... +...+.++. ++++. +++++.|..+.+|++.
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNV-----GLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECC-----SSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccC-----CCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 888999999999999999999887665543 222344444 55542 3444445557888775
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5e-37 Score=299.92 Aligned_cols=281 Identities=16% Similarity=0.266 Sum_probs=229.6
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
....+.+|.++|++++|+ +++|++|+.||+|++||+.+++.+..+..|...|.+++|+|+ +.++++|+.|+.|++||
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS-GNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT-SSEEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC-CCEEEEEeCCCeEEEEE
Confidence 356799999999999999 899999999999999999999999999999999999999995 55889999999999999
Q ss_pred ccCCCCCcc-eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEE
Q 009274 322 FSFPLGHEP-LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSG 398 (538)
Q Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (538)
+.+...... ......+.. ......+++++ .+++++.|++|++||+++++.+..+.+|.+.|.+++|+ +.++++|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTG--YLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp TTTCSBSCEEEEEEECCSS--CEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CccCCCcceeEEEecCCCc--cEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 987543222 222333332 22234556655 58999999999999999999999999999999999999 4599999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeec--cccceEEEEEe--
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQ--THKGSVFAVFL-- 472 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~--~h~~~v~~~~~-- 472 (538)
+.|++|++||+++++....+..+. ..+.. ++|+|++++|++|+.||+|++||.+. ....+. .+...|.+++|
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~-~~v~~-v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHE-SDINA-ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCc-CCEEE-EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 999999999999999988887664 34444 79999999999999999999999764 333333 23357888877
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEE
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYY 535 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~ 535 (538)
++++|++|+.||.|++||+.+.+....... +...+.++.+ +++ .|++|+.||.|++||
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAG-----HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeec-----CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999999999988776554432 3345566555 455 488999999999996
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=300.52 Aligned_cols=279 Identities=17% Similarity=0.185 Sum_probs=217.1
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC-----------CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK-----------DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
..|...|.+++|+ |++|++++ |+++++||.. ..........|...|.+++|+|+ ..+++|+.||
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~l~~~s~dg 103 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE--RGILVASDSG 103 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT--TEEEEEETTS
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC--CeEEEEECCC
Confidence 3577889999999 88888777 7788888732 11111222346678999999985 3678999999
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C-
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N- 392 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~- 392 (538)
+|++||+.+++...........+. .....+++++++++|++|+.|++|++||+++++++..+.+|.+.|++++|+ +
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~-~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHD-DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred EEEEEeccCCCceeEeeccccCCC-CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 999999998766544443222222 223356889999999999999999999999999999999999999999998 2
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEE
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFA 469 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (538)
.++++|+.|++|++||+++++....+...........++++| +++++++|+.||.|++||.+ +++..+.+|...|.+
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 478999999999999999999988876554444445578887 46789999999999999954 578889999999999
Q ss_pred EEe--CC-CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC--EEEEEECCCeEEEEEcC
Q 009274 470 VFL--EG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG--KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 470 ~~~--~~-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~l~sg~~dg~v~vw~~~ 537 (538)
++| ++ ++|++|+.|++|++||+.++++..... |...+..+.| +++ .|++|+.||+|++|++.
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~------H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA------HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC------CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 987 55 589999999999999999988654332 3345666655 444 35689999999999985
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-37 Score=306.51 Aligned_cols=291 Identities=21% Similarity=0.292 Sum_probs=227.6
Q ss_pred CeEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 241 ~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
.......+.+|.+.|++++|+ +++|+||+.||+|++||+.+++....++.|...|.+++|+|+ +.++++|+.|+.++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~-g~~las~~~d~~v~ 133 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN-GQSVACGGLDSACS 133 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT-SSEEEECCSSSCCE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC-CCEEEEeeCCCcEE
Confidence 344667899999999999999 899999999999999999999999999999999999999995 55789999999999
Q ss_pred EEEccCCCCC----cceeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEe-----cCCCCCeEEE
Q 009274 319 VWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTM-----SGHKSAVSTL 388 (538)
Q Consensus 319 vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l 388 (538)
+||+.+.... ........+... . ....+.++ +..|++|+.|++|++||+++++.+..+ .+|...|.++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~-v-~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGY-A-SSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSC-C-CCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcc-e-EEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 9999754321 122222233221 1 12345554 457999999999999999999988877 6799999999
Q ss_pred EEe---CCEEEEEecCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecc
Q 009274 389 AVC---NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT 462 (538)
Q Consensus 389 ~~~---~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~ 462 (538)
+|+ ++++++|+.|++|++||++. ++.+..+..|. ..+.. ++|+|++++|++|+.||+|++||.++ .+..+..
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~-~~v~~-v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE-GDINS-VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS-SCCCE-EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC-CCeEE-EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 996 46999999999999999984 56677776653 44444 69999999999999999999999664 4444443
Q ss_pred cc-------ceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeE
Q 009274 463 HK-------GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTV 531 (538)
Q Consensus 463 h~-------~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v 531 (538)
+. ..|.+++| +|++|++|+.||.|++||+..++........... +...+.++.+ +++ .|++|+.||.|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeCCCCE
Confidence 32 23666665 8999999999999999999888765544322111 3334455444 555 58889999999
Q ss_pred EEEEcC
Q 009274 532 KVYYYG 537 (538)
Q Consensus 532 ~vw~~~ 537 (538)
++|+++
T Consensus 369 ~iW~~~ 374 (380)
T 3iz6_a 369 KIWAFS 374 (380)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999986
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.6e-36 Score=295.40 Aligned_cols=282 Identities=20% Similarity=0.245 Sum_probs=230.1
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
....+.+|.+.|++++|+ +++|+||+.||+|++||..+++....+..|...|.+++|+|+ +.++++|+.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~-g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS-GCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT-SSEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC-CCEEEEeeCCCCEEEEE
Confidence 356799999999999999 899999999999999999999999999999999999999995 55889999999999999
Q ss_pred ccCCCCCc---ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe----CCE
Q 009274 322 FSFPLGHE---PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC----NGV 394 (538)
Q Consensus 322 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~----~~~ 394 (538)
+....... .......+. ......+++++++.+++|+.|++|++||+++++++..+.+|...|.+++++ +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHT--NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECS--SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EeccccccccccceeeeccC--CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 87543221 122222222 223356788899999999999999999999999999999999999999997 359
Q ss_pred EEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecc--ccceEEEE
Q 009274 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT--HKGSVFAV 470 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~--h~~~v~~~ 470 (538)
+++|+.|++|++||+++++++..+..|. ..+.. ++|+|++++|++|+.|++|++||.+. ....+.. +...+.++
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-~~v~~-v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHE-SDVNS-VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCC-CCeEE-EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 9999999999999999999988887664 34444 69999999999999999999999764 3333333 33467777
Q ss_pred Ee--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEE
Q 009274 471 FL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYY 535 (538)
Q Consensus 471 ~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~ 535 (538)
.| ++++|++|+.|+.|++||+.+++....... +...+.++.+ +++ .|++|+.||+|++|+
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-----h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG-----HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-----CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC-----CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 76 899999999999999999988765544322 3345555555 455 488999999999996
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.7e-36 Score=290.08 Aligned_cols=284 Identities=21% Similarity=0.363 Sum_probs=232.4
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
......+.+|.+.|++++|+ +++|++|+.||.|++||+.+++....+.+|...|.+++|+|+ +.++++++.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC-CCEEEEECCCCEEEE
Confidence 34567899999999999999 899999999999999999999999999999999999999995 568899999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
||+.++.... .+..+.. .....+++++++++++|+.|+.|++||+++++.+..+..|..+|.+++|+ +.++++
T Consensus 92 wd~~~~~~~~---~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKCLK---TLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCEEE---EEECCSS--CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEE---EEcCCCC--CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 9998765333 2333322 23356788999999999999999999999999999999999999999999 559999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEE----EE
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFA----VF 471 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~----~~ 471 (538)
++.|+.|++||+++++.+..+...+...+. .++++|+++++++++.||.|++||..+ ....+.+|.....+ ..
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEE-EEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceE-EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 999999999999999988877655444444 479999999999999999999999654 56677777654322 23
Q ss_pred e-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEE-EEEeCC-EEEEEE--CCCeEEEEEcC
Q 009274 472 L-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITA-LLYWQG-KLFVGC--ADRTVKVYYYG 537 (538)
Q Consensus 472 ~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~l~sg~--~dg~v~vw~~~ 537 (538)
+ ++.+|++|+.||.|++||+.+++....... +...+.. .+.+++ .+++++ .|+.|++|+..
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG-----HTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECC-----CSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhc-----cCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 2 788999999999999999999887655432 2234444 444554 466676 69999999964
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=291.65 Aligned_cols=288 Identities=20% Similarity=0.256 Sum_probs=217.1
Q ss_pred EEEEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCC--ceEEEE-ec-CCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 244 KFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDF--SHVHTF-KG-HDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~--~~~~~~-~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
.+..+.+|.++|++++|++++|++|+.|++|++||+.++ +....+ .+ |...|.+++|+|+ +.++++|+.|++|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~las~s~D~~v~i 84 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH-TSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT-SSEEEEEETTSCEEE
T ss_pred cceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC-CCEEEEEeCCCcEEE
Confidence 567899999999999999779999999999999999875 455666 44 9999999999995 468899999999999
Q ss_pred EEccCCCC----CcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC----CceeEEecCCCCCeEEEEEe
Q 009274 320 WSFSFPLG----HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD----GTLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 320 wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~ 391 (538)
||+..... ......+..+.. ....++++|++++|++|+.|++|++||++. .+++..+.+|...|.+++|+
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHEN--EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEC-------CCCEEEEEEC------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEcccCcCccccceeEEEEcCCCC--cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99864321 122233333322 233568889999999999999999999943 24677889999999999999
Q ss_pred --CCEEEEEecCCcEEEEECCCC--ceeEEEecCCCCceEEEEEEcCC--CCEEEEEeCCCcEEEEeCCc----------
Q 009274 392 --NGVLYSGSRDGTIRLWSLSDH--SLLTVLEEDSSGAVSSVLSLTAV--QHTLVVSHESGSIKVWRNDK---------- 455 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~---------- 455 (538)
+.+|++|+.|++|++||..++ +++..+..| ...+.. +.|+|+ +..|++|+.|++|++||...
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~-~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWS-SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEE-EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEE-EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 559999999999999999876 466666665 344444 689998 67899999999999999542
Q ss_pred ceeeecc-ccceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCC-ceEEEEE-e--CC-EEEEEECC
Q 009274 456 FMKSMQT-HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGS-VITALLY-W--QG-KLFVGCAD 528 (538)
Q Consensus 456 ~~~~~~~-h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~--~~-~l~sg~~d 528 (538)
....+.. |...|.+++| ++.+|++++.||.|++||..+++.......... +.. .+.++.+ + ++ .|++|+.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALC--HGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCT--TTTSCEEEEEEC-----CCEEEEETT
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccc--cccceEEEEEEecCCCceEEEEecCC
Confidence 2334444 8999999998 567899999999999999987743222111111 222 4555554 3 33 58899999
Q ss_pred CeEEEEEcCC
Q 009274 529 RTVKVYYYGK 538 (538)
Q Consensus 529 g~v~vw~~~~ 538 (538)
|.|++|++.+
T Consensus 319 g~v~~W~~~~ 328 (330)
T 2hes_X 319 GIVNFWSLEK 328 (330)
T ss_dssp SEEEEEEC--
T ss_pred CcEEEEEecc
Confidence 9999999863
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-36 Score=299.46 Aligned_cols=281 Identities=17% Similarity=0.196 Sum_probs=218.0
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeC------CCcEEEEeCCCCce----EEEEecCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSF------DKSIHVWSLKDFSH----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~------dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
..+|.+.|++++|+ |++|++|+. |++|++|+..++.. .....+|...|.+++|+|++ .+++++.||
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK--GILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT--EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC--CEEEEECCC
Confidence 35799999999999 999999997 78899999877643 33445789999999999964 356788899
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---C
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---N 392 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~ 392 (538)
+|++||+.+++...........+. .....++++|++++|++|+.|+.|++||+++++.+..+.+|...|++++|+ +
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~-~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHD-DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp CEEEC--------CCCCEEECCCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred EEEEeeccccceeEEEeeccCCCC-CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 999999987765433332221111 223456889999999999999999999999999999999999999999998 2
Q ss_pred CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC-CCEEEEEeCCCcEEEEeCC--cceeeeccccceEEE
Q 009274 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFA 469 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (538)
.++++++.|++|++||+++++....+...........++|+|+ +.++++|+.|+.|++||.+ +....+.+|...|.+
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 4899999999999999999988776654433334445789987 5689999999999999965 467888999999999
Q ss_pred EEe--CC-CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CC-EEEEEECCCeEEEEEcC
Q 009274 470 VFL--EG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 470 ~~~--~~-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~l~sg~~dg~v~vw~~~ 537 (538)
++| ++ ++|++|+.||+|+|||+++++...... +...+..+.| | ++ .|++|+.||+|++|++.
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~------H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS------HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC------CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 987 54 689999999999999999988765543 3345666665 3 44 68899999999999985
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-36 Score=304.18 Aligned_cols=265 Identities=23% Similarity=0.404 Sum_probs=232.5
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
..+.++.+.+.+..+++++.++.+++|+ +.+|.+.|++++|+ +++|++|+.|++|++||+.+++.+..+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Confidence 4688899999999999999999999998 56899999999998 899999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
.+|...|.+++|+|+ +.++++|+.|++|++||+.++... ..+..+.. ......++++++++++|+.|++|++||
T Consensus 189 ~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~---~~~~~h~~--~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 189 HGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCV---KTFTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEE---EEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEE---EEEeCCCc--cEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 999999999999995 457899999999999999876543 33333332 223457788999999999999999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEeC----------------------CEEEEEecCCcEEEEECCCCceeEEEecCCCCce
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVCN----------------------GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAV 426 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~~----------------------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 426 (538)
++++++...+.+|...|.+++|++ .++++|+.|++|++||+++++++..+..|. ..+
T Consensus 263 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-~~v 341 (410)
T 1vyh_C 263 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWV 341 (410)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCE
T ss_pred CCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC-CcE
Confidence 999999999999999999999973 379999999999999999999998888763 444
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 427 SSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 427 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
.. ++|+|++++|++|+.||.|++||.. ++...+.+|...|.+++| ++.+|++|+.||+|++|+++
T Consensus 342 ~~-v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 342 RG-VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EE-EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EE-EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 44 6999999999999999999999954 567889999999999988 78899999999999999863
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=288.62 Aligned_cols=264 Identities=20% Similarity=0.324 Sum_probs=226.9
Q ss_pred ccceeeeecc----CcceeEEeecCCeEEEEE-----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC
Q 009274 220 ADIDQARAAG----GVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 220 ~~~~~~~~~~----~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 282 (538)
..|..+.+.+ ++..+++++.++.+++|+ +.+|...|.+++++ +.++++++.|++|++||+.++
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~ 112 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG 112 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 3466666654 356789999999999886 46899999999999 889999999999999999999
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 362 (538)
+.+..+..|...+.+++|+|++ .++++++.||.|++||+.++.....+. .+. ......+++|++++|++|+.||
T Consensus 113 ~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~---~~~--~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 113 KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLD---TRG--KFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEE---CSS--SCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEec---CCC--ceEEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999999954 578999999999999998765432222 221 2234568899999999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 009274 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (538)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 440 (538)
.|++||+++++.+..+.+|..+|.+++|+ +.+|++|+.|++|++||+++++....+..+. ..+.. ++|+|++.+|+
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~-~~~sp~~~~l~ 264 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-SWVLN-VAFCPDDTHFV 264 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-SCEEE-EEECTTSSEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-CceEE-EEECCCCCEEE
Confidence 99999999999999999999999999999 5599999999999999999999988887664 44444 79999999999
Q ss_pred EEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 441 VSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 441 ~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
+++.|++|++||.. +++..+.+|...|.+++| ++++|++++.||.|++||.
T Consensus 265 s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999954 577888999999999988 8899999999999999996
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-35 Score=287.65 Aligned_cols=283 Identities=22% Similarity=0.358 Sum_probs=222.9
Q ss_pred EEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC-----CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 244 KFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
....|.+|.++|++++|+ +++|+||+.|++|++||+.+ +.++..+++|...|.+++|+|+ +.++++|+.|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 445799999999999998 47999999999999999863 3457789999999999999985 56889999999
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC---
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN--- 392 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~--- 392 (538)
+|++||+.+++. +..+..+.. ....++++++++++++|+.|++|++||++ ++.+..+.+|...|.++.+.+
T Consensus 88 ~v~~wd~~~~~~---~~~~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 88 TLRLWDVATGET---YQRFVGHKS--DVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEEEETTTTEE---EEEEECCSS--CEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC--
T ss_pred EEEEEECCCCCe---eEEEccCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCC
Confidence 999999987643 333333332 22345778889999999999999999986 567788899999999999973
Q ss_pred -----CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccc
Q 009274 393 -----GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKG 465 (538)
Q Consensus 393 -----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~ 465 (538)
..+++++.|+.|++||+++++....+..|. ..+.. ++++|++++|++|+.||.|++||... .+..+.. ..
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-~~v~~-~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~ 238 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN-SNINT-LTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QD 238 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCC-SCEEE-EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CS
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCC-CcEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CC
Confidence 279999999999999999998888887653 44444 79999999999999999999999654 4555554 46
Q ss_pred eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCc---ccCCCceE-EEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGA---IPCGSVIT-ALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 466 ~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
.|.+++| ++.+|++++.+ .+++|++.............. ..+...+. ..+.+++. |++|+.||.|++|++.
T Consensus 239 ~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 7888877 88888888754 599999988765544332211 11222344 44455654 8889999999999975
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.9e-35 Score=308.61 Aligned_cols=310 Identities=15% Similarity=0.208 Sum_probs=243.9
Q ss_pred CccceeeeeccCcc-eeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 219 GADIDQARAAGGVK-DLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
...+..+.+.+++. .++++..++.+++|+ +.+|.+.|++++|+ +++|++|+.|++|++||+.+++.+.
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 226 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEee
Confidence 44678888888876 589999999999986 56899999999999 8999999999999999999999988
Q ss_pred EEe-------cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee
Q 009274 287 TFK-------GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (538)
Q Consensus 287 ~~~-------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 359 (538)
.+. +|.+.|.+++|+|+ +.++++++.|++|++||+.+++....+..... .......+.++++.+++++
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTR----IEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSS----GGGCEEEEEECSSCEEEEE
T ss_pred eeccccccccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCC----ccceeEEEEEcCCEEEEEe
Confidence 884 79999999999995 45789999999999999987654333322111 1112334556888999999
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCC---------------
Q 009274 360 GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS--------------- 422 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--------------- 422 (538)
.|+.+++||..+++....+.+|...|++++|+ +++|++++.|++|++||+.+++....+...+
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcE
Confidence 99999999999998888899999999999999 5599999999999999998765433210000
Q ss_pred ----------------------------------------C-------------------------CceEEEEEEcCCCC
Q 009274 423 ----------------------------------------S-------------------------GAVSSVLSLTAVQH 437 (538)
Q Consensus 423 ----------------------------------------~-------------------------~~~~~~~~~~~~~~ 437 (538)
. .....+++++|+++
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~ 461 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ 461 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC
T ss_pred EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC
Confidence 0 01123468999999
Q ss_pred EEEEEeCCCcEEEEeCCcc----eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCC-CeeEeeeecCCcccCCC
Q 009274 438 TLVVSHESGSIKVWRNDKF----MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG-DEFEEDVIPTGAIPCGS 510 (538)
Q Consensus 438 ~l~~~~~dg~i~iwd~~~~----~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~ 510 (538)
+|++|+.|++|++||.... ... .+|...|.+++| ++++|++++.|++|++||+.+ .+....... ..+..
T Consensus 462 ~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~---~~H~~ 537 (611)
T 1nr0_A 462 FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW---TFHTA 537 (611)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC---CCCSS
T ss_pred EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeee---eeccc
Confidence 9999999999999996432 233 679999999987 999999999999999999987 443221011 11334
Q ss_pred ceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 511 VITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 511 ~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
.+.++.+ +++ .|++|+.|++|++|++.
T Consensus 538 ~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 538 KVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 4555555 555 48899999999999985
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-35 Score=286.70 Aligned_cols=264 Identities=17% Similarity=0.286 Sum_probs=226.2
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----ce
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SH 284 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~ 284 (538)
..+..+.+++++..++++..++.+++|+ +..|...|.+++|+ ++++++|+.|+.|++||+.+. +.
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~ 135 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCccee
Confidence 3578888999999999999999999997 46799999999999 899999999999999999865 45
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
...+.+|.+.|.++.|++++ .+++++.|++|++||+.++... ..+..+.. .....+++|+++++++|+.|+.|
T Consensus 136 ~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~--~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 136 SRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT---TTFTGHTG--DVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp EEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEE---EEECCCSS--CEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEE---EEEcCCCC--ceEEEEECCCCCEEEEEeCCCcE
Confidence 67788999999999998754 4789999999999999875432 33333332 22355788899999999999999
Q ss_pred EEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 365 KAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
++||+++++++..+.+|...|++++|+ +++|++|+.|++|++||+++++.+..+...........++|+|+++++++|
T Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp EEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE
Confidence 999999999999999999999999999 569999999999999999999887777543322234447999999999999
Q ss_pred eCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
+.||.|++||.. +....+.+|...|.++++ ++.+|++|+.||.|++||
T Consensus 289 ~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 289 YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999954 567788999999999987 889999999999999997
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=287.10 Aligned_cols=291 Identities=18% Similarity=0.229 Sum_probs=223.3
Q ss_pred CeEEEEEeecCCC-cEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE--E-EecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 241 GNVKFKDLQGHRD-CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH--T-FKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 241 ~~~~i~~l~~h~~-~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~--~-~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
....+..+.+|.+ .|++++|+ +++|++|+.|++|+|||+.+++... . ..+|...|.+++|+|+ +.+|++|+.|
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~-g~~l~s~s~D 82 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC-GNYLASASFD 82 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT-SSEEEEEETT
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC-CCEEEEEECC
Confidence 3456778999988 99999999 8999999999999999998876432 2 2579999999999995 5588999999
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEe
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~ 391 (538)
+++++||+..... ..+..+..+.. ....++++|++++|++|+.|++|++||++++. ++..+.+|...|.+++|+
T Consensus 83 ~~v~iw~~~~~~~-~~~~~~~~h~~--~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 83 ATTCIWKKNQDDF-ECVTTLEGHEN--EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp SCEEEEEECCC-E-EEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred CcEEEEEccCCCe-EEEEEccCCCC--CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 9999999875431 12233333332 23356888999999999999999999998763 456778999999999999
Q ss_pred --CCEEEEEecCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc------------
Q 009274 392 --NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------------ 455 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------------ 455 (538)
+.+|++++.|++|++||.++++. ...+..| ...+.. ++|+|++++|++|+.|++|++||...
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~-l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWS-LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEE-EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEE-EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 55999999999999999988764 3455554 344444 79999999999999999999998421
Q ss_pred -----ceeeecc-ccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeE-----eeeecCCcccCCCceEEEEEe-C--
Q 009274 456 -----FMKSMQT-HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFE-----EDVIPTGAIPCGSVITALLYW-Q-- 519 (538)
Q Consensus 456 -----~~~~~~~-h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~-- 519 (538)
++..+.+ |...|.+++| ++..|++++.|+.|++|+....... ....+... .+...+.++.|. +
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ-AHSQDVNCVAWNPKEP 316 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT-SSSSCEEEEEECSSST
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc-cccCcEeEeEEeCCCc
Confidence 1233444 8889999988 7889999999999999998754310 01111111 134456666664 4
Q ss_pred CEEEEEECCCeEEEEEcCC
Q 009274 520 GKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 520 ~~l~sg~~dg~v~vw~~~~ 538 (538)
..|++|+.||.|++|++.+
T Consensus 317 ~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 317 GLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp TEEEEEETTSCEEEEEECC
T ss_pred eEEEEcCCCCcEEEEEecC
Confidence 3688999999999999853
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.9e-35 Score=295.00 Aligned_cols=297 Identities=22% Similarity=0.327 Sum_probs=248.4
Q ss_pred ccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEE
Q 009274 228 AGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAV 298 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 298 (538)
..++..++++..++.+++|+ +.+|.+.|++++|+++++++|+.||+|++||+.+++.+..+.+|...|.++
T Consensus 126 ~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 126 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEE
Confidence 34578899999999999887 468999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe
Q 009274 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM 378 (538)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 378 (538)
.|+ +..+++|+.||.|++||+.+++....+ ..+. ..+.++.++++++++|+.||.|++||+++++.+..+
T Consensus 206 ~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~---~~~~----~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (445)
T 2ovr_B 206 HLH---EKRVVSGSRDATLRVWDIETGQCLHVL---MGHV----AAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 275 (445)
T ss_dssp EEE---TTEEEEEETTSEEEEEESSSCCEEEEE---ECCS----SCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE
T ss_pred Eec---CCEEEEEeCCCEEEEEECCCCcEEEEE---cCCc----ccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 995 357899999999999999876543322 2222 235567778999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cc
Q 009274 379 SGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KF 456 (538)
Q Consensus 379 ~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~ 456 (538)
.+|...|.++.|++.++++++.|+.|++||+++++.+..+..+.. .+. ++.++++++++|+.||.|++||.. +.
T Consensus 276 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~---~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 276 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTS---GMELKDNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCS-CEE---EEEEETTEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc-cEE---EEEEeCCEEEEEeCCCeEEEEECCCCcE
Confidence 999999999999888999999999999999999999988876533 332 344567899999999999999954 45
Q ss_pred eeeecc---ccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCE-EEEEECCCe-
Q 009274 457 MKSMQT---HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGK-LFVGCADRT- 530 (538)
Q Consensus 457 ~~~~~~---h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-l~sg~~dg~- 530 (538)
...+.. |...|.++.+++++|++|+.||.|++||+.+++............+...+..+.++ ++. +++|+.||+
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 666765 88999999999999999999999999999998876665332222345566666665 555 677999997
Q ss_pred ---EEEEEcCC
Q 009274 531 ---VKVYYYGK 538 (538)
Q Consensus 531 ---v~vw~~~~ 538 (538)
|.+||++.
T Consensus 432 ~~~l~v~df~~ 442 (445)
T 2ovr_B 432 ETKLLVLDFDV 442 (445)
T ss_dssp CCEEEEEECCC
T ss_pred ccEEEEEECCC
Confidence 99999863
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.7e-35 Score=306.75 Aligned_cols=302 Identities=17% Similarity=0.190 Sum_probs=238.4
Q ss_pred ceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC--ceEEEE
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHTF 288 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~ 288 (538)
+..+.++++++.++++. ++.+.+|+ +.+|.+.|++++|+ |++|++|+.|++|+|||+.++ .....+
T Consensus 21 ~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~ 99 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI 99 (611)
T ss_dssp CCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred eeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee
Confidence 44566777788887776 45777776 56899999999999 999999999999999999754 345678
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCC----CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCc
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRT 363 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~ 363 (538)
.+|.+.|.+++|+|++. .+++++.+ +.|++||.. .... .+..+.. ....++|+|++. .|++|+.|++
T Consensus 100 ~~~~~~v~~v~fs~dg~-~l~~~~~~~~~~~~v~~wd~~--~~~~---~l~gh~~--~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 100 PVFSGPVKDISWDSESK-RIAAVGEGRERFGHVFLFDTG--TSNG---NLTGQAR--AMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp ECSSSCEEEEEECTTSC-EEEEEECCSSCSEEEEETTTC--CBCB---CCCCCSS--CEEEEEECSSSSCEEEEEETTSC
T ss_pred cccCCceEEEEECCCCC-EEEEEECCCCceeEEEEeeCC--CCcc---eecCCCC--CceEEEECCCCCeEEEEEeCCCe
Confidence 89999999999999766 44555543 467788743 2222 2223322 233567888876 6999999999
Q ss_pred EEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEec------CCCCceEEEEEEcCC
Q 009274 364 IKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEE------DSSGAVSSVLSLTAV 435 (538)
Q Consensus 364 i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 435 (538)
|++||..+++....+.+|...|++++|+ +.+|++|+.|++|++||+.+++....+.. .|.+.+.. ++|+|+
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~-v~~spd 250 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG-LTWSPD 250 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE-EEECTT
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEE-EEECCC
Confidence 9999999999999999999999999999 55999999999999999999998888742 34555555 699999
Q ss_pred CCEEEEEeCCCcEEEEeCCc--ce-------------------------------------------eeeccccceEEEE
Q 009274 436 QHTLVVSHESGSIKVWRNDK--FM-------------------------------------------KSMQTHKGSVFAV 470 (538)
Q Consensus 436 ~~~l~~~~~dg~i~iwd~~~--~~-------------------------------------------~~~~~h~~~v~~~ 470 (538)
+++|++++.|++|++||..+ .. ..+.+|...|.++
T Consensus 251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 99999999999999999643 11 2345788999999
Q ss_pred Ee--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCEEEEEECCCeEEEEEcC
Q 009274 471 FL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 471 ~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~v~vw~~~ 537 (538)
++ ++++|++++.|++|++||+.+++........ +...+..+.+ +++.+++++.|+.+++|+..
T Consensus 331 ~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~----h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 331 SSSADGKTLFSADAEGHINSWDISTGISNRVFPDV----HATMITGIKTTSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS----CSSCEEEEEECTTSCEEEEETTTEEEEECSS
T ss_pred EEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC----CcceEEEEEECCCCcEEEEEcCCceEEeecC
Confidence 87 8999999999999999999988764432111 3334555554 57789999999999999864
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-34 Score=286.52 Aligned_cols=277 Identities=20% Similarity=0.296 Sum_probs=219.8
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc------------------CeEEEEEecCCCC
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH------------------KVMAVVYVDEDQP 306 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~------------------~v~~l~~~~~~~~ 306 (538)
...+|.+.|+|++|+ |++|++|+ |+++++|++.+++.+..+..|.. .|.+++|+|+ +.
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~ 136 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD-GK 136 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT-SS
T ss_pred EecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC-CC
Confidence 344799999999999 88999876 78999999999999888876542 4899999995 45
Q ss_pred EEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeE
Q 009274 307 LCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVS 386 (538)
Q Consensus 307 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 386 (538)
++++|+.|+.|++||+.+++. ...+..+.. .....++++++++|++|+.|++|++||+++++....+. +...+.
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~---~~~~~~h~~--~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~ 210 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKI---VMILQGHEQ--DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVT 210 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEE---EEEECCCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred EEEEEcCCCeEEEEECCCCcE---EEEEccCCC--CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcE
Confidence 789999999999999986533 233333332 22345788899999999999999999999999888776 567899
Q ss_pred EEEEe---CCEEEEEecCCcEEEEECCCCceeEEEec------CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--
Q 009274 387 TLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEE------DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-- 455 (538)
Q Consensus 387 ~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-- 455 (538)
+++|+ +.++++|+.|+.|++||+++++.+..+.. .+...+.. ++|+|++++|++|+.|+.|++||...
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS-VVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE-EEECTTSSEEEEEETTSEEEEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE-EEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 99998 35999999999999999999988777631 23344444 79999999999999999999999643
Q ss_pred ------------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe---
Q 009274 456 ------------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--- 518 (538)
Q Consensus 456 ------------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 518 (538)
+...+.+|...|.++++ ++.+|++|+.||.|++||+.+++....... +...+..+.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~-----h~~~v~~v~~~~~~ 364 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-----HRNSVISVAVANGS 364 (393)
T ss_dssp -----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSC
T ss_pred CcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC-----CCCCEEEEEecCCc
Confidence 34567789999999987 889999999999999999998876554432 23345555543
Q ss_pred ----C-CEEEEEECCCeEEEEEcC
Q 009274 519 ----Q-GKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 519 ----~-~~l~sg~~dg~v~vw~~~ 537 (538)
+ ..|++|+.||+|++|++.
T Consensus 365 ~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 365 SLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CcCCCCCEEEEECCCCcEEECccc
Confidence 2 358899999999999974
No 20
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=271.98 Aligned_cols=280 Identities=21% Similarity=0.316 Sum_probs=234.6
Q ss_pred CeEEEEEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 241 GNVKFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 241 ~~~~i~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
+...+..+.+|.+.|++++|. +++|++|+.||.|++||+.+++....+..|...|.+++|+|+ +.++++++.||.|++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSE-KELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETT-TTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCC-CCEEEEecCCCeEEE
Confidence 445678899999999999998 999999999999999999999999999999999999999995 568899999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLY 396 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~ 396 (538)
|++..............+.. .+.++.++++++++++.||.|++|| .++.+..+..|...+.++.|. +++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQG----NVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EETTCCTTSCC-CEECCCSS----CEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEeeecCCCCcccchhhccc----CEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 99987665555555544433 3566777899999999999999999 778888899999999999997 56999
Q ss_pred EEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--
Q 009274 397 SGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (538)
Q Consensus 397 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~-- 472 (538)
+++.|+.|++|| ..+....+...+...+.. ++++|++. +++++.||.|++||.+ +.+..+..|...|.++.+
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRH-LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEE-EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEE-EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec
Confidence 999999999999 456666676645555554 68999988 9999999999999954 577888899999999988
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEE-EEeCCEEEEEECCCeEEEEEcC
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++ .|++++.||.|++||+.+++........ ...+..+ +.+++.+++++.||.|++|++.
T Consensus 236 ~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSKENGSLKQVITLP-----AISIWSVDCMSNGDIIVGSSDNLVRIFSQE 295 (313)
T ss_dssp TS-CEEEEETTSEEEEECTTTCCEEEEEECS-----SSCEEEEEECTTSCEEEEETTSCEEEEESC
T ss_pred CC-CEEEEecCCEEEEEECCCCceeEEEecc-----CceEEEEEEccCCCEEEEeCCCcEEEEeCC
Confidence 55 6999999999999999998876655432 2234444 4457789999999999999986
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.2e-35 Score=283.49 Aligned_cols=267 Identities=18% Similarity=0.170 Sum_probs=209.4
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEE-----e---------------ecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeC
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKD-----L---------------QGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSL 279 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-----l---------------~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~ 279 (538)
.+..+.+++++..++++. +..+++|+ + ..|...|++++|+ ++.+++|+.||+|+|||+
T Consensus 32 ~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~ 110 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWEL 110 (344)
T ss_dssp EEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEec
Confidence 367788888888887766 44444443 1 1245789999999 889999999999999999
Q ss_pred CCCceEEE----EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-E
Q 009274 280 KDFSHVHT----FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-Y 354 (538)
Q Consensus 280 ~~~~~~~~----~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 354 (538)
++++.+.. +.+|.+.|.+++|+|+ +.+|++|+.|++|++||+.+++. +..+..+.. .....++++++. +
T Consensus 111 ~~~~~~~~~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd~~~~~~---~~~~~~h~~--~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 111 DENETLIVSKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKVWDLAQQVV---LSSYRAHAA--QVTCVAASPHKDSV 184 (344)
T ss_dssp CTTSSCEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEE---EEEECCCSS--CEEEEEECSSCTTE
T ss_pred cCCCceeEeeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcE---EEEEcCcCC--ceEEEEecCCCCCc
Confidence 98876544 4489999999999995 55889999999999999987643 333433332 223457777775 8
Q ss_pred EEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEE
Q 009274 355 LYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (538)
Q Consensus 355 l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (538)
+++|+.|++|++||+++++....+. .|...+.+++|+ +.++++|+.|++|++||+++++++..+..|. ..+..
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-~~v~~- 262 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-QCVTG- 262 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-SCEEE-
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-CCEEE-
Confidence 8999999999999999999888774 456679999998 3488999999999999999999999998764 44444
Q ss_pred EEEcCCC-CEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe--CC-CEEEEEeCCCeEEEEecCCCee
Q 009274 430 LSLTAVQ-HTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EG-KWLFTGGWDKTVSVQELAGDEF 496 (538)
Q Consensus 430 ~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~--~~-~~l~sgs~dg~v~iwd~~~~~~ 496 (538)
++|+|++ ++|++|+.|++|++||... .+..+.+|.+.|.+++| ++ .+|+++|.||+|++|++.+...
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 6999997 5799999999999999653 45567899999999987 55 4788999999999999987653
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.9e-34 Score=276.81 Aligned_cols=287 Identities=20% Similarity=0.338 Sum_probs=222.2
Q ss_pred EEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCc-----eEEEEecCCcCeEEEEEecCCCCEEEEEcCC
Q 009274 243 VKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFS-----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 314 (538)
....+|+||.++|++++|+ +++|+|||.|++|+|||+.+.+ +...+++|...|.+++|+|+ +.++++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d-g~~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD-GQFALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC-CCEEEEEccc
Confidence 3445799999999999998 5799999999999999987643 56788999999999999985 5588999999
Q ss_pred CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEe--
Q 009274 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMSGHKSAVSTLAVC-- 391 (538)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~-- 391 (538)
+.|++|+............ .. .......++++++++++|+.|+.+++||...... .....+|...+.+++|+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVG---HT--KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp SEEEEEETTTTEEEEEEEC---CS--SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ccceEEeecccceeeeecC---CC--CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 9999999875432222211 11 2233457788889999999999999999876654 34457899999999998
Q ss_pred --CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceE
Q 009274 392 --NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSV 467 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v 467 (538)
..++++++.|+.|++||+++++.+..+..+. ..+.+ ++|+|++++|++|+.||.|++||... .+..+.. ...+
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-~~v~~-~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v 259 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT-GYLNT-VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDII 259 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE-EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCC-CcEEE-EEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceE
Confidence 2378999999999999999999988887663 44444 69999999999999999999999664 4444544 4578
Q ss_pred EEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCC----cccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcCC
Q 009274 468 FAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG----AIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 468 ~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~~ 538 (538)
.++.+ .+..+++++.|+.|++||+++........... ...+...+.++.+ +++ .|++|+.||.|+|||+.+
T Consensus 260 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 260 NALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 88877 45567777889999999999887654443211 1123345565555 454 588999999999999853
No 23
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-33 Score=285.86 Aligned_cols=280 Identities=20% Similarity=0.324 Sum_probs=229.0
Q ss_pred EEEEeecCCCc-EEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 244 KFKDLQGHRDC-VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 244 ~i~~l~~h~~~-V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
....+.+|.+. ++++.++++++++|+.||+|++||+.+++.+..+.+|.+.|.+++|++++ ++++|+.||+|++||+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEET
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEEC
Confidence 34578999888 57888889999999999999999999999999999999999999998755 8899999999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEe--ecCCEEEEeeCCCcEEEEECCCCce-----------------------eEE
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALT--TSGRYLYTGSGDRTIKAWSLLDGTL-----------------------SCT 377 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~sg~~dg~i~iwd~~~~~~-----------------------~~~ 377 (538)
.++.. ...+..+.. .....+++ ++++++++|+.||.|++||+++++. +..
T Consensus 191 ~~~~~---~~~~~~h~~--~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 191 KKGCC---THVFEGHNS--TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp TTTEE---EEEECCCSS--CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred CCCcE---EEEECCCCC--ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 87643 333333332 12234555 4667999999999999999987652 456
Q ss_pred ecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Cc
Q 009274 378 MSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DK 455 (538)
Q Consensus 378 ~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~ 455 (538)
+.+|...|.++..+++++++++.|+.|++||+++++.+..+..+. ..+.. ++++|+++++++|+.||.|++||. ++
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~-~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYS-TIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE-EEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEE-EEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 788999999998889999999999999999999999998887653 34444 799999999999999999999995 45
Q ss_pred ceeeeccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEE
Q 009274 456 FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVY 534 (538)
Q Consensus 456 ~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw 534 (538)
.+..+.+|...|.++.+++++|++++.||.|++||+.+........+.. ......+.+++. +++|+ ||.|++|
T Consensus 344 ~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~-dg~i~iw 417 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTN-----LSAITTFYVSDNILVSGS-ENQFNIY 417 (464)
T ss_dssp EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTT-----CCCEEEEEECSSEEEEEE-TTEEEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCC-----CccEEEEEeCCCEEEEec-CCeEEEE
Confidence 7788899999999999999999999999999999999877554443221 122334455555 55555 9999999
Q ss_pred EcCC
Q 009274 535 YYGK 538 (538)
Q Consensus 535 ~~~~ 538 (538)
|+.+
T Consensus 418 d~~~ 421 (464)
T 3v7d_B 418 NLRS 421 (464)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9853
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.2e-34 Score=277.91 Aligned_cols=282 Identities=19% Similarity=0.311 Sum_probs=212.8
Q ss_pred EEEEeecCCCcEEEEEE-----c---CCEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCcCeEEEEEecCCCCEE
Q 009274 244 KFKDLQGHRDCVTGLAV-----G---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDHKVMAVVYVDEDQPLC 308 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~-----~---~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l 308 (538)
....+++|.+.|++++| + +++|+||+.|++|++||+.+. .....+.+|...|.+++|+|+ +.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~-~~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE-NCFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS-TTEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC-CCEE
Confidence 45679999999999999 3 789999999999999998743 456788999999999999984 5688
Q ss_pred EEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCe
Q 009274 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAV 385 (538)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~~~v 385 (538)
++|+.|++|++||++++... ..+..+.. ....++++|++++|++|+.|++|++||+... ..... .+|...|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~---~~~~~h~~--~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTY---KRFVGHQS--EVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWV 165 (343)
T ss_dssp EEEETTSEEEEEETTSSCEE---EEEECCCS--CEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCE
T ss_pred EEEcCCCcEEEEECCCCcEE---EEEcCCCC--cEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCcee
Confidence 99999999999999876433 33333332 2335688999999999999999999999743 33333 3788999
Q ss_pred EEEEEeC------------CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 009274 386 STLAVCN------------GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (538)
Q Consensus 386 ~~l~~~~------------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 453 (538)
.+++|++ .++++++.|+.|++||. +.+....+..+. ..+.. ++|+|++++|++|+.||.|++||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~-~~v~~-~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE-SNVNH-LSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS-SCEEE-EEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc-ccceE-EEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999982 58999999999999994 556666666553 44444 799999999999999999999997
Q ss_pred Cc---ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecC-C-------cccCCCceEEEEE-eC
Q 009274 454 DK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPT-G-------AIPCGSVITALLY-WQ 519 (538)
Q Consensus 454 ~~---~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~-~~ 519 (538)
.. ....+ .+...|.+++| ++.+++ ++.|+.|++||+.+.+........ . ...+...+.++.+ ++
T Consensus 243 ~~~~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 243 LNLTYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp SCCSSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred CCCcccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 32 22222 34556888887 666665 456888999999876543211111 0 0013334555555 45
Q ss_pred C-EEEEEECCCeEEEEEcC
Q 009274 520 G-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 520 ~-~l~sg~~dg~v~vw~~~ 537 (538)
+ .|++|+.||.|++|++.
T Consensus 321 g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SCCEEEEETTSEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEE
Confidence 4 48899999999999974
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.3e-34 Score=287.83 Aligned_cols=276 Identities=22% Similarity=0.331 Sum_probs=236.5
Q ss_pred EEeecCCCc-EEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 246 KDLQGHRDC-VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 246 ~~l~~h~~~-V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
..+.+|.+. ++|+.++++++++|+.||+|++||+.+++.+..+.+|...|.+++|+ +.++++|+.||+|++||+.+
T Consensus 112 ~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 112 KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE---TTEEEEEETTSCEEEEETTT
T ss_pred EEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec---CCEEEEEeCCCeEEEEECCc
Confidence 458899886 57888889999999999999999999999999999999999999996 45899999999999999987
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcE
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTI 404 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i 404 (538)
++.. .....+. ..+.++.++++.+++|+.||.|++||+++++.+..+.+|...|.+++++++++++|+.|+.|
T Consensus 189 ~~~~---~~~~~h~----~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 189 GECI---HTLYGHT----STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 261 (445)
T ss_dssp TEEE---EEECCCS----SCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCE
T ss_pred CcEE---EEECCCC----CcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEE
Confidence 6432 3333322 24667777899999999999999999999999999999999999999988899999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEeCCCEEEEEeC
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFLEGKWLFTGGW 482 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~~~~~l~sgs~ 482 (538)
++||+++++.+..+..+. ..+.. +.+ ++.++++++.||.|++||. .+....+.+|...+.++.++++++++|+.
T Consensus 262 ~iwd~~~~~~~~~~~~~~-~~v~~-~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 337 (445)
T 2ovr_B 262 KVWDPETETCLHTLQGHT-NRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 337 (445)
T ss_dssp EEEEGGGTEEEEEECCCS-SCEEE-EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEET
T ss_pred EEEECCCCcEeEEecCCC-CceEE-EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeC
Confidence 999999999998887653 33333 455 8899999999999999995 45778889999999999999999999999
Q ss_pred CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 483 DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 483 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
||.|++||+.+++......... .+...+.++.+.+..+++|+.||.|++||+.
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPN--KHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTT--SCSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEccCC--CCCCCEEEEEECCCEEEEEeCCCeEEEEECC
Confidence 9999999999887665544322 2455677888888889999999999999985
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-33 Score=296.24 Aligned_cols=299 Identities=23% Similarity=0.390 Sum_probs=245.1
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEE--------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
...+..+.+.+++..++++..++.+++|+ +.+|.+.|++++|+ ++++++++.|++|++||... +.+..+
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~ 340 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTL 340 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEE
Confidence 34577788889999999999999999886 56899999999998 89999999999999999764 567788
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
.+|...|.+++|+|++ .++++++.||.|++||... ..+.....+.. .....++++++++|++++.|+.|++||
T Consensus 341 ~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~~----~~~~~~~~~~~--~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 341 TGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNG----QLLQTLTGHSS--SVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTC----CEEEEEECCSS--CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCCC----CEEEEecCCCC--CeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 9999999999999854 5789999999999999642 22333333332 223458899999999999999999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 369 LLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
. +++.+..+.+|...|++++|+ +.+|++++.|++|++||. +++.+..+..+. ..+.. ++|+|++++|++++.|+
T Consensus 414 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~-~~v~~-~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 414 R-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRG-VAFSPDGQTIASASDDK 489 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCS-SCEEE-EEECTTSCEEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCC-CCEEE-EEEcCCCCEEEEEeCCC
Confidence 5 678888999999999999999 559999999999999996 567777777653 44444 79999999999999999
Q ss_pred cEEEEeC-CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE-EeCCE-
Q 009274 447 SIKVWRN-DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL-YWQGK- 521 (538)
Q Consensus 447 ~i~iwd~-~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 521 (538)
.|++||. ++....+.+|...|.+++| ++++|++++.||.|++||..+........ +...+..+. .+|+.
T Consensus 490 ~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~------h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 490 TVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG------HSSSVWGVAFSPDGQT 563 (577)
T ss_dssp EEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEEC------CSSCEEEEEECTTSSC
T ss_pred EEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcC------CCCCEEEEEEcCCCCE
Confidence 9999994 4678889999999999987 89999999999999999976544332222 233455544 45654
Q ss_pred EEEEECCCeEEEEE
Q 009274 522 LFVGCADRTVKVYY 535 (538)
Q Consensus 522 l~sg~~dg~v~vw~ 535 (538)
|++++.||+|++||
T Consensus 564 l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 564 IASASSDKTVKLWN 577 (577)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEeCCCEEEEeC
Confidence 88999999999997
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=278.83 Aligned_cols=273 Identities=21% Similarity=0.226 Sum_probs=221.6
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe------------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC--c
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--S 283 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l------------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~ 283 (538)
..+..+.+++++..++++..++.+++|++ .+|.+.|++++|+ +++|++|+.|++|++||+.++ +
T Consensus 17 ~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 17 SRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence 35778889999999999999999999974 4799999999999 899999999999999998876 4
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
.+..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.+......+.....+.. .....+++|++++|++|+.|++
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ--DVKHVVWHPSQELLASASYDDT 173 (345)
T ss_dssp EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS--CEEEEEECSSSSCEEEEETTSC
T ss_pred EEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC--CeEEEEECCCCCEEEEEeCCCc
Confidence 57889999999999999995 56889999999999999987654444444444332 2234678899999999999999
Q ss_pred EEEEECCCCc--eeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCC---------------ceeEEEecCCCC
Q 009274 364 IKAWSLLDGT--LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH---------------SLLTVLEEDSSG 424 (538)
Q Consensus 364 i~iwd~~~~~--~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~---------------~~~~~~~~~~~~ 424 (538)
|++||.++++ +...+.+|...|++++|+ +++|++|+.|++|++||.... +++..+...+..
T Consensus 174 i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 253 (345)
T 3fm0_A 174 VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSR 253 (345)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSS
T ss_pred EEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCC
Confidence 9999998875 456789999999999999 559999999999999997432 223344443444
Q ss_pred ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc------c-----eeeeccccceEEEEEe--CC-CEEEEEeCCCeEEEEe
Q 009274 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------F-----MKSMQTHKGSVFAVFL--EG-KWLFTGGWDKTVSVQE 490 (538)
Q Consensus 425 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------~-----~~~~~~h~~~v~~~~~--~~-~~l~sgs~dg~v~iwd 490 (538)
.+.. ++|++++..+++++.|+.|++|+... + .....+|...|.+++| ++ .+|++|+.||+|++|+
T Consensus 254 ~v~~-v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 254 TIYD-IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332 (345)
T ss_dssp CEEE-EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred cEEE-EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEE
Confidence 5554 69999999999999999999998432 1 1223579999999998 44 5999999999999999
Q ss_pred cCCCee
Q 009274 491 LAGDEF 496 (538)
Q Consensus 491 ~~~~~~ 496 (538)
+.+.+.
T Consensus 333 ~~~~~~ 338 (345)
T 3fm0_A 333 YQRPEG 338 (345)
T ss_dssp ECC---
T ss_pred ecCCCC
Confidence 988764
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.5e-35 Score=292.41 Aligned_cols=275 Identities=17% Similarity=0.307 Sum_probs=224.9
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-----
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS----- 283 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~----- 283 (538)
..|..+.+++++..+++++.++.+++|+ +.+|...|.+++|+ +++|++|+.|+.|++||+.+..
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence 4588899999999999999999999997 56899999999999 9999999999999999986532
Q ss_pred --eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeec-ccCCceeeeEEEEee-cCCEEEEee
Q 009274 284 --HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN-EEKDWRYSGIHALTT-SGRYLYTGS 359 (538)
Q Consensus 284 --~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~sg~ 359 (538)
....+.+|.+.|.++.|+|+++..+++|+.|++|++||+.++.....+.... ..+.... ...++.+ +++++++|+
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV-LSLSINSLNANMFISGS 225 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE-EEEEECSSSCCEEEEEE
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe-EEEEeecCCCCEEEEEE
Confidence 3456789999999999999888889999999999999998765433221111 1111111 1233433 778999999
Q ss_pred CCCcEEEEECC-CCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCC-----ceEEEEE
Q 009274 360 GDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----AVSSVLS 431 (538)
Q Consensus 360 ~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~ 431 (538)
.|++|++||++ .++.+..+.+|.+.|++++|+ +.+|++|+.|++|++||+++++.+..+..+... .....++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 99999999998 557888999999999999999 459999999999999999999988877653221 1123479
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCC--cceeee----ccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 432 LTAVQHTLVVSHESGSIKVWRND--KFMKSM----QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 432 ~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~----~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
|+|+++++++|+.||.|++||.. +....+ .+|.+.|.++++ ++++|++|+.||+|++|++.+.+
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999954 344444 679999999887 89999999999999999998653
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=277.46 Aligned_cols=265 Identities=17% Similarity=0.244 Sum_probs=224.2
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC------
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF------ 282 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~------ 282 (538)
..|.++.+.+++..+++++.++.+++|+ +..|...|.+++|+ +.++++|+.|+.+++|++...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA 144 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccc
Confidence 3588899999999999999999999997 45688899999999 999999999999999998643
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee--cCCEEEEeeC
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSG 360 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~ 360 (538)
.....+.+|...|.+++|+|++ ..+++++.|++|++||+++++.. ..+..+.. .....++++ ++++|++|+.
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~---~~~~~h~~--~v~~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLL---QSFHGHGA--DVLCLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEE---EEEECCSS--CEEEEEECCCSSCCEEEEEET
T ss_pred ccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEE---EEEcCCCC--CeEEEEEEeCCCCCEEEEEeC
Confidence 3456778899999999999854 57799999999999999876533 33333332 122345655 4679999999
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 009274 361 DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
||.|++||+++++++..+.+|...|++++|+ +++|++|+.|++|++||+++++.+..+..+........+.|+|++++
T Consensus 219 Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred CCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 9999999999999999999999999999998 56999999999999999999887776654433333445799999999
Q ss_pred EEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEe
Q 009274 439 LVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd 490 (538)
+++|+.|+.|++||.. +.+..+.+|...|.+++| ++++|++|+.||+|++|+
T Consensus 299 l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 299 LFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999954 567788899999999987 899999999999999996
No 30
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.5e-34 Score=289.67 Aligned_cols=272 Identities=18% Similarity=0.325 Sum_probs=226.9
Q ss_pred EeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 009274 247 DLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (538)
...+|...|+|++++++++++|+.||+|++||+.+++....+.+|...|.+++| ++.++++|+.||+|++||+.++.
T Consensus 128 ~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 128 CRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCC
T ss_pred cccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCc
Confidence 345678899999999999999999999999999999999999999999999998 56689999999999999998765
Q ss_pred CCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCcee---EEecCCCCCeEEEEEeCCEEEEEecCCc
Q 009274 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLS---CTMSGHKSAVSTLAVCNGVLYSGSRDGT 403 (538)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~~~~~l~s~s~dg~ 403 (538)
... ....+ ...+.++..+++.+++|+.||.|++||+++++.. ..+.+|...|.++++.++++++|+.||.
T Consensus 205 ~~~---~~~~h----~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~ 277 (435)
T 1p22_A 205 MLN---TLIHH----CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT 277 (435)
T ss_dssp EEE---EECCC----CSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSE
T ss_pred EEE---EEcCC----CCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCe
Confidence 433 22222 2346677778899999999999999999988765 6778999999999999999999999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEeCCCEEEEEe
Q 009274 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFLEGKWLFTGG 481 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~~~~~l~sgs 481 (538)
|++||+++++.+..+..+.. .+.. +.+ +++++++|+.||.|++||.+ +.+..+.+|...|.++.+++++|++|+
T Consensus 278 i~vwd~~~~~~~~~~~~~~~-~v~~-~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~ 353 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKR-GIAC-LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA 353 (435)
T ss_dssp EEEEETTTCCEEEEEECCSS-CEEE-EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEE
T ss_pred EEEEECCcCcEEEEEcCCCC-cEEE-EEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEe
Confidence 99999999999999886643 3332 344 57899999999999999954 577889999999999999999999999
Q ss_pred CCCeEEEEecCCCe---------eEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 482 WDKTVSVQELAGDE---------FEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 482 ~dg~v~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.||.|++||+.+.. ....... +...+..+.+.+..|++|+.||.|++||+.
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVE-----HSGRVFRLQFDEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECC-----CSSCCCCEEECSSCEEECCSSSEEEEEC--
T ss_pred CCCcEEEEECCCCCCccccccchheeeccC-----CCCCeEEEEeCCCEEEEEeCCCEEEEEECC
Confidence 99999999986543 2222211 333455666667779999999999999985
No 31
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-32 Score=280.04 Aligned_cols=292 Identities=21% Similarity=0.361 Sum_probs=236.8
Q ss_pred CcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEE
Q 009274 230 GVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVV 299 (538)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 299 (538)
++..++++..++.+++|+ +.+|.+.|++++|+ ++++++|+.||+|++||+++++.+..+.+|...|.+++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 210 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEE
Confidence 456888999999999887 56899999999999 66999999999999999999999999999999999999
Q ss_pred Eec-CCCCEEEEEcCCCcEEEEEccCCCCCcc--------------------eeeecccCCceeeeEEEEeecCCEEEEe
Q 009274 300 YVD-EDQPLCISGDSGGGIFVWSFSFPLGHEP--------------------LKKWNEEKDWRYSGIHALTTSGRYLYTG 358 (538)
Q Consensus 300 ~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~l~sg 358 (538)
|++ .++.++++|+.||+|++||+.+...... ...... +...+.+++++++++++|
T Consensus 211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~l~~~ 286 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG----HMASVRTVSGHGNIVVSG 286 (464)
T ss_dssp EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC----CSSCEEEEEEETTEEEEE
T ss_pred EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC----ccceEEEEcCCCCEEEEE
Confidence 996 3557899999999999999987653322 111112 233466789999999999
Q ss_pred eCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 009274 359 SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (538)
Q Consensus 359 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (538)
+.||.|++||+++++++..+.+|...|.+++|+ ++++++|+.|+.|++||+++++.+..+..+. ..+.. +.++ +
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~-~~~~--~ 362 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-ALVGL-LRLS--D 362 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE-EEEC--S
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-CcEEE-EEEc--C
Confidence 999999999999999999999999999999999 5599999999999999999999999988764 33333 4665 6
Q ss_pred CEEEEEeCCCcEEEEeCCcceeeecc---ccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceE
Q 009274 437 HTLVVSHESGSIKVWRNDKFMKSMQT---HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVIT 513 (538)
Q Consensus 437 ~~l~~~~~dg~i~iwd~~~~~~~~~~---h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 513 (538)
+++++++.||.|++||..+....+.. +...+.++.++++++++|+ ||.|++||+.+++........ +...+.
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~----~~~~v~ 437 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILK----DADQIW 437 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTT----TCSEEE
T ss_pred CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhcc----CCCcEE
Confidence 89999999999999997765444433 2334556677999999999 899999999998876542222 345677
Q ss_pred EEEEeCCEEEE-EECCCeEEEE
Q 009274 514 ALLYWQGKLFV-GCADRTVKVY 534 (538)
Q Consensus 514 ~~~~~~~~l~s-g~~dg~v~vw 534 (538)
.+.++++.+++ ++.||.+.+|
T Consensus 438 ~v~~~~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 438 SVNFKGKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEEETTEEEEEEEETTEEEEE
T ss_pred EEEecCCEEEEEEEeCCeEEEE
Confidence 77777777665 5667765544
No 32
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-33 Score=282.13 Aligned_cols=292 Identities=16% Similarity=0.214 Sum_probs=232.5
Q ss_pred EEEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCc------eEEEEecCCcCeEEEEEecC---CC---CEEEEEc
Q 009274 245 FKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFS------HVHTFKGHDHKVMAVVYVDE---DQ---PLCISGD 312 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~h~~~v~~l~~~~~---~~---~~l~s~~ 312 (538)
...+.+|.++|++++|+.++|++|+.||+|++||+.+++ .+..+.+|...|.+++|+|+ ++ .++++++
T Consensus 9 ~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp EEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 455889999999999999999999999999999999888 78899999999999999986 25 6889999
Q ss_pred CCCcEEEEEccCCCCCcc--eeeecccCC---ceeeeEEEEe----ecCCE-EEEeeCCCcEEEEECCC------CceeE
Q 009274 313 SGGGIFVWSFSFPLGHEP--LKKWNEEKD---WRYSGIHALT----TSGRY-LYTGSGDRTIKAWSLLD------GTLSC 376 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~----~~~~~-l~sg~~dg~i~iwd~~~------~~~~~ 376 (538)
.||.|++||+.+...... ......+.. .......+++ +++++ |++++.||.|++||+++ ++.+.
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 999999999987664211 222322210 1233456788 88999 99999999999999998 66665
Q ss_pred -----Ee-------cCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEec---CC--CCceEEEEEEcCCCCE
Q 009274 377 -----TM-------SGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEE---DS--SGAVSSVLSLTAVQHT 438 (538)
Q Consensus 377 -----~~-------~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~ 438 (538)
.+ ..|...|.+++|+ ++++++++.|+.|++||+++++.+..+.. +. ...+. .++|+|++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~-~i~~~~~~~~ 247 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR-SVKFSPQGSL 247 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE-EEEECSSTTE
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc-eEEECCCCCE
Confidence 66 4489999999999 23999999999999999999998888876 30 23333 4799999999
Q ss_pred EEEEeCC---CcEEEEeCC--cceeeecc-------------ccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEe
Q 009274 439 LVVSHES---GSIKVWRND--KFMKSMQT-------------HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 439 l~~~~~d---g~i~iwd~~--~~~~~~~~-------------h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~ 498 (538)
|++++.| |.|++||.. +.+..+.. |...|.++.| ++++|++++.||.|++||+.+++...
T Consensus 248 l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 248 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence 9999999 999999954 56777887 9999999987 79999999999999999999988766
Q ss_pred eeecCC-cccC---------------CCceEEEEE-eCC-----------EEEEEECCCeEEEEEcC
Q 009274 499 DVIPTG-AIPC---------------GSVITALLY-WQG-----------KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 499 ~~~~~~-~~~~---------------~~~~~~~~~-~~~-----------~l~sg~~dg~v~vw~~~ 537 (538)
...... ...+ ...+..+.+ +++ .|++|+.||.|++|++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 655110 0011 345555555 564 68899999999999985
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.6e-33 Score=270.82 Aligned_cols=301 Identities=16% Similarity=0.260 Sum_probs=235.7
Q ss_pred ceeeeeccCcceeEEeecCC---------eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc---eEEE
Q 009274 222 IDQARAAGGVKDLVNGLSKG---------NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHT 287 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~---------~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~---~~~~ 287 (538)
+..+.+++++..++.+..++ ........+|.+.|++++|+ ++++++++ ||.|++||+.+++ ....
T Consensus 12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~ 90 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ 90 (337)
T ss_dssp CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence 34455555555555444322 23334456899999999999 88999998 9999999998765 3344
Q ss_pred Ee--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEE
Q 009274 288 FK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (538)
Q Consensus 288 ~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 365 (538)
+. .|...|.+++|+|+ +.++++++.||.|++||+.++... .......+. ......+++++++++++++.||.|+
T Consensus 91 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 91 LDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLAAPTPR-IKAELTSSA--PACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp EECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECCCC--E-EEEEEECSS--SCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCCcc-eeeecccCC--CceEEEEECCCCCEEEEEeCCCcEE
Confidence 44 79999999999995 557899999999999999876421 122222222 2233557888999999999999999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe
Q 009274 366 AWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
+||+++++.+..+..|...|.+++|+ ++++++++.|+.|++||+++++.+..+... ..+. .++++|+++++++++
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~-~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIF-SLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEE-EEEECTTSSEEEEEE
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceE-EEEECCCCCEEEEEc
Confidence 99999999999999999999999998 559999999999999999999888777542 3344 479999999999999
Q ss_pred CCCcEEEEeCCc-ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eC
Q 009274 444 ESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQ 519 (538)
Q Consensus 444 ~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 519 (538)
.|+.|++||... ....+..|...+.++.+ ++++|++++.||.|++||+.+++......+ ...+..+.+ ++
T Consensus 244 ~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~v~~~~~s~~ 317 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE------SSSVLSCDISVD 317 (337)
T ss_dssp TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC------SSCEEEEEECTT
T ss_pred CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecC------CCcEEEEEECCC
Confidence 999999999654 45567789999999987 799999999999999999998876644332 234555544 44
Q ss_pred C-EEEEEECCCeEEEEEc
Q 009274 520 G-KLFVGCADRTVKVYYY 536 (538)
Q Consensus 520 ~-~l~sg~~dg~v~vw~~ 536 (538)
+ .|++++.||.|++|++
T Consensus 318 ~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 318 DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEETTSCEEEEEE
T ss_pred CCEEEEecCCCeEEEEEE
Confidence 4 5888999999999997
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-33 Score=271.10 Aligned_cols=264 Identities=22% Similarity=0.384 Sum_probs=216.3
Q ss_pred ccceeeeeccCc-ceeEEeecCCeEEEEE--------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC
Q 009274 220 ADIDQARAAGGV-KDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~--------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 282 (538)
..+..+.+.+++ ..++++..++.+++|+ +.+|...|++++|+ +++|++|+.|++|++||+.++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG 97 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 346777777654 7889999999999985 46899999999998 899999999999999999999
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee------cCCEEE
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT------SGRYLY 356 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~ 356 (538)
+.+..+.+|...|.+++|+|+ +.++++|+.|++|++||++.. .+.....+... .....+.| ++..++
T Consensus 98 ~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 98 ETYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDW--VSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETTSC----EEEEECCCSSC--EEEEEECCC------CCEEE
T ss_pred CeeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCC----eEEEEeccCCc--EEEEEEccCCCCCCCccEEE
Confidence 999999999999999999984 568899999999999998632 23333333321 22334555 345899
Q ss_pred EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC
Q 009274 357 TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA 434 (538)
Q Consensus 357 sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (538)
+++.|+.|++||+++++....+.+|...|.+++|+ +.+|++|+.|++|++||+++++.+..+..+ ..+. .++|+|
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~-~~~~sp 247 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVF-SLAFSP 247 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEE-EEEECS
T ss_pred EEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEE-EEEEcC
Confidence 99999999999999999999999999999999999 559999999999999999999998888754 2344 479999
Q ss_pred CCCEEEEEeCCCcEEEEeCCc--ceeee--------ccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 435 VQHTLVVSHESGSIKVWRNDK--FMKSM--------QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 435 ~~~~l~~~~~dg~i~iwd~~~--~~~~~--------~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
++.++++++.+ .+++|+... ....+ ..|...+.+++| +|++|++|+.||.|++||+.+.
T Consensus 248 ~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 248 NRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 99999988765 599998543 22222 235667888876 9999999999999999998653
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-33 Score=267.48 Aligned_cols=267 Identities=19% Similarity=0.295 Sum_probs=220.3
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
..+..+.+++++..++++..++.+++|++ .+|..+|.+++|+ +++|++|+.|++|++||+.+++.+..+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 34788999999999999999999999984 5799999999998 899999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAW 367 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iw 367 (538)
++|.+.|.+++|+|+ +.++++|+.|++|++||++++.. ....+..+.. .....+++| ++..|++|+.|++|++|
T Consensus 94 ~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~--~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp ECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCS--CEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred eCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcc--hhhhhcccCC--cEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 999999999999995 45889999999999999986532 1222333322 233557777 56799999999999999
Q ss_pred ECCCCceeEEec-CCCCCeEEEEEe----CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 368 SLLDGTLSCTMS-GHKSAVSTLAVC----NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 368 d~~~~~~~~~~~-~h~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
|++++.....+. +|...+..+.|. +.+|++|+.|++|++||+++++++..+..|.. .+.. ++|+|++.+|++|
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~-~v~~-~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS-NVSF-AVFHPTLPIIISG 246 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEE-EEECSSSSEEEEE
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC-CEEE-EEECCCCCEEEEE
Confidence 998887766664 566889999997 34999999999999999999999999987743 3443 6899999999999
Q ss_pred eCCCcEEEEeCC--cceeeeccccceEEEEEe--CCC--EEEEEeCCCeEEEEecCCC
Q 009274 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGK--WLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~--~l~sgs~dg~v~iwd~~~~ 494 (538)
+.||+|++||.. +..+.+..|...+.++++ ++. ++++|+.| .+.+|++.+.
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 999999999954 577888899999999985 443 57777654 5778877653
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.8e-33 Score=276.39 Aligned_cols=281 Identities=13% Similarity=0.157 Sum_probs=218.7
Q ss_pred EEEEeecCCCcEEEEEEc--C-CEEEEEeCCCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--G-GFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~-~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 318 (538)
....+.+|.+.|++++|+ + ++|++|+.||.|++||+.+++....+. +|...|.+++|+|+++.++++++.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 456789999999999999 5 799999999999999999988887776 69999999999997778999999999999
Q ss_pred EEEccCCCCCcceeeecccC-CceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC-E
Q 009274 319 VWSFSFPLGHEPLKKWNEEK-DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG-V 394 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~ 394 (538)
+||+... .......+. ........+++++++++++|+.|+.|++||+ +++.+..+.+|...|.+++|+ +. +
T Consensus 145 iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 145 LRDFSGS----VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEETTSC----EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEECCCC----ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 9999842 222222221 1122345688999999999999999999999 678888999999999999999 34 8
Q ss_pred EEEEecCCcEEEEECCC----CceeEEEecCCCCceEEEEEEcC-CCCEEEEEeCCCcEEEEeCCc--ceeeecccc---
Q 009274 395 LYSGSRDGTIRLWSLSD----HSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRNDK--FMKSMQTHK--- 464 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~--- 464 (538)
+++++.|+.|++||+++ +..+..+. +...+.. ++|+| ++++|++++.|+.|++||..+ ....+..|.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~-~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 296 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNA-AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ 296 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEE-EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEE-EEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc
Confidence 99999999999999998 55666663 3444444 79999 999999999999999999653 344444432
Q ss_pred --------------ceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEE-EEEeCCE-EEEEE
Q 009274 465 --------------GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITA-LLYWQGK-LFVGC 526 (538)
Q Consensus 465 --------------~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-l~sg~ 526 (538)
..+..+.+ ++++ +|+.||.|++||+.+++......... +...+.+ .+.+++. |++|+
T Consensus 297 ~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~---~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 297 FQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN---AAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT---BCSCCCEEEECTTSSEEEEEE
T ss_pred cccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCC---CCceEEEEEEecCccEEEEec
Confidence 22333433 6665 78899999999999888765554321 2345555 4445665 55665
Q ss_pred CCCeEEEEEcCC
Q 009274 527 ADRTVKVYYYGK 538 (538)
Q Consensus 527 ~dg~v~vw~~~~ 538 (538)
||.|++|++++
T Consensus 372 -d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 -GFNILIWNRED 382 (383)
T ss_dssp -TTEEEEEECC-
T ss_pred -CCcEEEEecCC
Confidence 99999999864
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-33 Score=280.52 Aligned_cols=309 Identities=14% Similarity=0.141 Sum_probs=240.4
Q ss_pred eeeeeccCcceeEEeecCCeEEEEEeec-------CCCcEEEE-EEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCC
Q 009274 223 DQARAAGGVKDLVNGLSKGNVKFKDLQG-------HRDCVTGL-AVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD 292 (538)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~-------h~~~V~~l-~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~ 292 (538)
....+++++..++++..++.+.+|++.. +...+.++ .++ +++|++|+.||.|++||+.+++....+.+|.
T Consensus 60 ~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp TTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS
T ss_pred cceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc
Confidence 3567888899999999999999998642 11244444 555 8999999999999999999999988888999
Q ss_pred cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC
Q 009274 293 HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG 372 (538)
Q Consensus 293 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~ 372 (538)
..|.+++|+|+ +.++++++.|+.|++||+.+++....+. .+.. .....++++++++|++|+.||.|++||++++
T Consensus 140 ~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~h~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 140 SEITKLKFFPS-GEALISSSQDMQLKIWSVKDGSNPRTLI---GHRA--TVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp SCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCCCEEEE---CCSS--CEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CccEEEEECCC-CCEEEEEeCCCeEEEEeCCCCcCceEEc---CCCC--cEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 99999999995 4588999999999999998766544332 2222 2335578899999999999999999999999
Q ss_pred ceeEEecC---CCCCeEEEEE---------------------e--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCce
Q 009274 373 TLSCTMSG---HKSAVSTLAV---------------------C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAV 426 (538)
Q Consensus 373 ~~~~~~~~---h~~~v~~l~~---------------------~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 426 (538)
+.+..+.. |...|.++++ + ++++++|+.||.|++||+++++....+...+...+
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc
Confidence 99988864 5556666666 3 34899999999999999999998888876555555
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEeCCc---ceeeecc-ccceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeee
Q 009274 427 SSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQT-HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 427 ~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~-h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 500 (538)
.. ++|+|++. ++++|+.||.|++||.++ ++..+.. |...+.++.+ ++++|++++.||.|++||+.........
T Consensus 294 ~~-~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~ 372 (420)
T 3vl1_A 294 NS-LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPA 372 (420)
T ss_dssp EE-EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCE
T ss_pred ee-EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccc
Confidence 55 69999998 999999999999999654 3566666 6778888866 8889999999999999999764211111
Q ss_pred ecCC----c-ccCCCceEEEEEeCCE----EEEEECCCeEEEEEcCC
Q 009274 501 IPTG----A-IPCGSVITALLYWQGK----LFVGCADRTVKVYYYGK 538 (538)
Q Consensus 501 ~~~~----~-~~~~~~~~~~~~~~~~----l~sg~~dg~v~vw~~~~ 538 (538)
.... . .+...+....+.+++. +++++.+|.+.+|++++
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 373 IEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred eeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 0000 0 1122334444555554 99999999999999863
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-34 Score=288.60 Aligned_cols=313 Identities=15% Similarity=0.184 Sum_probs=243.2
Q ss_pred ceeeeeccCcc-eeEEe----------ecCCeEEEEEee-----------cCCCcEEEEEEc--CCEEEEEeCCCcEEEE
Q 009274 222 IDQARAAGGVK-DLVNG----------LSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVW 277 (538)
Q Consensus 222 ~~~~~~~~~~~-~~~~~----------~~~~~~~i~~l~-----------~h~~~V~~l~~~--~~~l~s~s~dg~i~iw 277 (538)
+..+.+++++. .++++ ..++.+++|++. .|...|++++|+ +++|++|+.||.|++|
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw 94 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELY 94 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEe
Confidence 34455566655 66666 678889999853 478899999998 8899999999999999
Q ss_pred eCCC----CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC------CCcceeeecccCCceeeeEEE
Q 009274 278 SLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL------GHEPLKKWNEEKDWRYSGIHA 347 (538)
Q Consensus 278 d~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~ 347 (538)
|+.+ .+.+..+.+|...|.+++|+|+++.++++++.||.|++||+.+.. ..........+. ......+
T Consensus 95 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~ 172 (416)
T 2pm9_A 95 STNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV--DEVISLA 172 (416)
T ss_dssp CCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS--CCCCEEE
T ss_pred ecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC--CCeeEEE
Confidence 9987 458888999999999999999878899999999999999998765 222221112222 2233567
Q ss_pred Eeec-CCEEEEeeCCCcEEEEECCCCceeEEecCC------CCCeEEEEEe-C--CEEEEEecCC---cEEEEECCCC-c
Q 009274 348 LTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGH------KSAVSTLAVC-N--GVLYSGSRDG---TIRLWSLSDH-S 413 (538)
Q Consensus 348 ~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~-~--~~l~s~s~dg---~i~iwd~~~~-~ 413 (538)
++++ +.++++++.||.|++||+++++.+..+..| ...|.+++|+ + .++++++.|+ .|++||++++ +
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 8888 679999999999999999999999888776 7899999999 2 3899999999 9999999987 5
Q ss_pred eeEEEe-cCCCCceEEEEEEcC-CCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CC-CEEEEEeCCCeE
Q 009274 414 LLTVLE-EDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EG-KWLFTGGWDKTV 486 (538)
Q Consensus 414 ~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~-~~l~sgs~dg~v 486 (538)
....+. .+ ...+.. ++|+| ++++|++++.||.|++||.. +.+..+..|...|.+++| ++ .+|++++.||.|
T Consensus 253 ~~~~~~~~~-~~~v~~-~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 253 PLQTLNQGH-QKGILS-LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp CSBCCCSCC-SSCEEE-EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred CcEEeecCc-cCceeE-EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 566565 33 444444 68999 99999999999999999954 577888899999999887 66 899999999999
Q ss_pred EEEecCCCeeEeeeec---------------------C---------CcccCCCce-EEEEEeCCE-EEEEECCCeEEEE
Q 009274 487 SVQELAGDEFEEDVIP---------------------T---------GAIPCGSVI-TALLYWQGK-LFVGCADRTVKVY 534 (538)
Q Consensus 487 ~iwd~~~~~~~~~~~~---------------------~---------~~~~~~~~~-~~~~~~~~~-l~sg~~dg~v~vw 534 (538)
++||+.+......... . ....+...+ ...+.++++ |++|+.||.|+||
T Consensus 331 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w 410 (416)
T 2pm9_A 331 EVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSIT 410 (416)
T ss_dssp EEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCB
T ss_pred EEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEE
Confidence 9999987653221100 0 000012233 445666877 5568889999999
Q ss_pred EcCC
Q 009274 535 YYGK 538 (538)
Q Consensus 535 ~~~~ 538 (538)
++.+
T Consensus 411 ~~~~ 414 (416)
T 2pm9_A 411 NPKI 414 (416)
T ss_dssp CCCC
T ss_pred Eecc
Confidence 9864
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.3e-32 Score=284.58 Aligned_cols=300 Identities=22% Similarity=0.380 Sum_probs=246.0
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE--------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 289 (538)
..+..+.+.+++..++++..++.+++|+ +.+|...|++++|+ ++.+++++.|+.|++||. +++....+.
T Consensus 222 ~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~ 300 (577)
T 2ymu_A 222 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLT 300 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEe
Confidence 4567788888899999999999998885 56899999999998 889999999999999996 567888899
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
+|...|.+++|+|+ +.++++++.|+.|++||.... .+.....+.. .....+++|+++++++|+.|+.|++||.
T Consensus 301 ~h~~~v~~~~~~~~-~~~l~t~~~d~~i~~w~~~~~----~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 301 GHSSSVWGVAFSPD-GQTIASASDDKTVKLWNRNGQ----HLQTLTGHSS--SVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSC----EEEEECCCSS--CEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCeEEEEECCC-CCEEEEEeCCCeEEEEeCCCC----eeEEEeCCCC--CEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 99999999999985 457899999999999997643 2222322222 2234688999999999999999999995
Q ss_pred CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc
Q 009274 370 LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (538)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 447 (538)
+++.+..+.+|...|.+++|+ +.+|++++.|+.|++||. +++.+..+..+. ..+.. ++|+|++++|++++.|+.
T Consensus 374 -~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~-~~v~~-~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 374 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWG-VAFSPDDQTIASASDDKT 449 (577)
T ss_dssp -TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS-SCEEE-EEECTTSSEEEEEETTSE
T ss_pred -CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC-CCeEE-EEECCCCCEEEEEcCCCE
Confidence 678888999999999999999 459999999999999995 567777777653 44444 699999999999999999
Q ss_pred EEEEeC-CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-E
Q 009274 448 IKVWRN-DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-L 522 (538)
Q Consensus 448 i~iwd~-~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l 522 (538)
|++||. .+....+.+|...|.++++ ++++|++++.|+.|++||..+........ +...+..+.+ +++. |
T Consensus 450 v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~------h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 450 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG------HSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp EEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEEC------CSSCEEEEEECTTSSCE
T ss_pred EEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeC------CCCCEEEEEEcCCCCEE
Confidence 999994 4567888999999999887 89999999999999999976544333222 2334555544 5554 8
Q ss_pred EEEECCCeEEEEEcC
Q 009274 523 FVGCADRTVKVYYYG 537 (538)
Q Consensus 523 ~sg~~dg~v~vw~~~ 537 (538)
++++.||.|++||..
T Consensus 524 ~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 524 ASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEETTSEEEEECTT
T ss_pred EEEECcCEEEEEeCC
Confidence 899999999999963
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-33 Score=269.05 Aligned_cols=266 Identities=19% Similarity=0.274 Sum_probs=202.7
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe------------ec-CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC----
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL------------QG-HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD---- 281 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l------------~~-h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~---- 281 (538)
.+....+.++ .++++..++.+++|++ .+ |.+.|++++|+ +++|++|+.|++|++||+..
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 4666666655 8889999999998864 23 99999999999 89999999999999999843
Q ss_pred ---CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC-CCCcceeeecccCCceeeeEEEEeecCCEEEE
Q 009274 282 ---FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (538)
Q Consensus 282 ---~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (538)
.+.+..+.+|...|.+++|+|+ +.+|++|+.|++|++||+... .....+..+..+.. ....++++|++++|++
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--DVKHVIWHPSEALLAS 170 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--CEEEEEECSSSSEEEE
T ss_pred cccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--ceEEEEECCCCCEEEE
Confidence 4567788999999999999995 568899999999999999543 22233333433332 2334578899999999
Q ss_pred eeCCCcEEEEECCCC--ceeEEecCCCCCeEEEEEeC----CEEEEEecCCcEEEEECCCC--------ceeEEEecCCC
Q 009274 358 GSGDRTIKAWSLLDG--TLSCTMSGHKSAVSTLAVCN----GVLYSGSRDGTIRLWSLSDH--------SLLTVLEEDSS 423 (538)
Q Consensus 358 g~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~~~~ 423 (538)
|+.|++|++||..++ +++..+.+|...|.+++|++ .+|++|+.|++|++||++++ .....+...+.
T Consensus 171 ~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~ 250 (330)
T 2hes_X 171 SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK 250 (330)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS
T ss_pred EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc
Confidence 999999999998876 67888999999999999993 27999999999999999764 23334433344
Q ss_pred CceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc----e-eeeccccc-eEEEEEe----CCCEEEEEeCCCeEEEEecCC
Q 009274 424 GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----M-KSMQTHKG-SVFAVFL----EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 424 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~-~~~~~h~~-~v~~~~~----~~~~l~sgs~dg~v~iwd~~~ 493 (538)
..+.. ++|++++ +|++++.||.|++||.... . ....+|.. .|.+++| ++++|++|+.||+|++||++.
T Consensus 251 ~~v~~-v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 251 RQVYN-VAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCEEE-EEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cceEE-EEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 55554 6888655 8999999999999995431 2 23356877 8988876 478999999999999999864
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-32 Score=264.31 Aligned_cols=267 Identities=17% Similarity=0.266 Sum_probs=225.3
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
..+..+.+.+++..++++..++.+++|+ +.+|...|.+++|+ +++|++|+.|+.|++||+.+++.+..+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 3578888999999999999999999987 46899999999999 899999999999999999999999999
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
++|...|.+++|+|+ +.++++|+.|+.|++||+++++.. ..+..+.. .....+++++++++++|+.||.|++||
T Consensus 104 ~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 104 KGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp ECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCEE---EEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEE---EEecCCCC--cEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 999999999999985 558899999999999999876433 22222222 233457888999999999999999999
Q ss_pred CCCCceeEEe-cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceE-EEEEEcCCCCEEEEEeC
Q 009274 369 LLDGTLSCTM-SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVS-SVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 369 ~~~~~~~~~~-~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ 444 (538)
+++++.+..+ ..+...+.+++|+ ++++++++.|+.|++||+++++.+..+..+...... ......+++.++++|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 257 (312)
T 4ery_A 178 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 257 (312)
T ss_dssp TTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT
T ss_pred CCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC
Confidence 9999888776 4566789999999 559999999999999999999998888766443222 22234577899999999
Q ss_pred CCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEe--CCCeEEEEecC
Q 009274 445 SGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGG--WDKTVSVQELA 492 (538)
Q Consensus 445 dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs--~dg~v~iwd~~ 492 (538)
||.|++||.. +.+..+.+|...|.++++ +++++++++ .|++|++|+..
T Consensus 258 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 258 DNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999954 567889999999999887 889999987 69999999864
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=275.06 Aligned_cols=307 Identities=17% Similarity=0.186 Sum_probs=245.1
Q ss_pred cceeeeeccCcc-eeEEeecCCeEEEEEe----e---------------c----------CCCcEEEEEEc--CCEEEEE
Q 009274 221 DIDQARAAGGVK-DLVNGLSKGNVKFKDL----Q---------------G----------HRDCVTGLAVG--GGFLFSS 268 (538)
Q Consensus 221 ~~~~~~~~~~~~-~~~~~~~~~~~~i~~l----~---------------~----------h~~~V~~l~~~--~~~l~s~ 268 (538)
.+..+.+++++. .++++..++.+.+|++ . . |.+.|++++|+ +++|+++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 126 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTG 126 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEE
Confidence 467788888888 8999999999999988 2 1 57799999999 8999999
Q ss_pred eCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC---------
Q 009274 269 SFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD--------- 339 (538)
Q Consensus 269 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------- 339 (538)
+.||.|++|| .+++.+..+..|...|.+++|+|+ +.++++++.||.|++||+.++.....+........
T Consensus 127 ~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 127 VENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp ETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred eCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 9999999999 678889999999999999999985 45778999999999999986543332222111100
Q ss_pred -ceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeE
Q 009274 340 -WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLT 416 (538)
Q Consensus 340 -~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 416 (538)
.......+++++ ..+++++.||.|++||+++++.+..+..|...|.+++|+ +++|++++.|+.|++||+++++.+.
T Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 205 DGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp -CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred CcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence 000223466665 468899999999999999999999999999999999999 5599999999999999999999888
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
.+..+. ..+.. +.|+|++ ++++++.|+.|++||.. +....+..|...+.++.+ ++++|++++.||.|++||+.
T Consensus 284 ~~~~~~-~~i~~-~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 284 CFYGHS-QSIVS-ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EECCCS-SCEEE-EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EecCCC-ccEEE-EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 887653 34444 7999999 99999999999999964 467778889999999887 79999999999999999998
Q ss_pred CCe--------------------eEeeeecCCcccCCC-ceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 493 GDE--------------------FEEDVIPTGAIPCGS-VITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 493 ~~~--------------------~~~~~~~~~~~~~~~-~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
+.+ ........ ... .+..+.+ +++ .|++++.||.|++|++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 361 KLNSKSRSLYGNRDGILNPLPIPLYASYQSS----QDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HHHC--------------CEECCEEEEECCT----TCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCccceeeeecccccccCcccchhhhhhcCc----ccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 765 33332221 121 4555555 455 58899999999999985
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-32 Score=274.15 Aligned_cols=264 Identities=19% Similarity=0.333 Sum_probs=213.2
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------ecCC------------------CcEEEEEEc--CCEEEEEeC
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHR------------------DCVTGLAVG--GGFLFSSSF 270 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~------------------~~V~~l~~~--~~~l~s~s~ 270 (538)
..+.++.+++++..++++. ++.+++|.+ .+|. ..|++++|+ +++|++|+.
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 3477888999988888875 566777763 2332 249999999 899999999
Q ss_pred CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee
Q 009274 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT 350 (538)
Q Consensus 271 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (538)
|++|++||+.+++.+..+.+|...|.+++|+|++ .++++++.|++|++||+.++.....+. .. ......++++
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~---~~---~~v~~~~~~~ 216 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS---IE---DGVTTVAVSP 216 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE---CS---SCEEEEEECS
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEE---cC---CCcEEEEEEC
Confidence 9999999999999999999999999999999965 577999999999999998754322221 11 1123457777
Q ss_pred -cCCEEEEeeCCCcEEEEECCCCceeEEe-------cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCc-------
Q 009274 351 -SGRYLYTGSGDRTIKAWSLLDGTLSCTM-------SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS------- 413 (538)
Q Consensus 351 -~~~~l~sg~~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~------- 413 (538)
+++++++|+.|+.|++||+++++.+..+ .+|...|.+++|+ +.+|++|+.|++|++||+++..
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 7889999999999999999999887776 5799999999999 5599999999999999997643
Q ss_pred -----eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--------CCCEEE
Q 009274 414 -----LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--------EGKWLF 478 (538)
Q Consensus 414 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--------~~~~l~ 478 (538)
+...+..| ...+.. +++++++.+|++|+.|+.|++||. ++.+..+.+|...|.++++ ++++|+
T Consensus 297 ~~~~~~~~~~~~h-~~~v~~-~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 297 PNSGTCEVTYIGH-KDFVLS-VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp ----CEEEEEECC-SSCEEE-EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCCCcceEEEecc-cCcEEE-EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 33444444 344444 699999999999999999999995 4577888999999999986 367999
Q ss_pred EEeCCCeEEEEecCC
Q 009274 479 TGGWDKTVSVQELAG 493 (538)
Q Consensus 479 sgs~dg~v~iwd~~~ 493 (538)
+|+.||+|++|++..
T Consensus 375 sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 375 TGSGDCKARIWKYKK 389 (393)
T ss_dssp EEETTSEEEEEEEEE
T ss_pred EECCCCcEEECcccc
Confidence 999999999999854
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.1e-32 Score=265.42 Aligned_cols=265 Identities=17% Similarity=0.287 Sum_probs=207.8
Q ss_pred cceeeee-----cc-CcceeEEeecCCeEEEEEe----------------ecCCCcEEEEEEc--CCEEEEEeCCCcEEE
Q 009274 221 DIDQARA-----AG-GVKDLVNGLSKGNVKFKDL----------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHV 276 (538)
Q Consensus 221 ~~~~~~~-----~~-~~~~~~~~~~~~~~~i~~l----------------~~h~~~V~~l~~~--~~~l~s~s~dg~i~i 276 (538)
.+..+.+ .+ ++..++++..++.+++|++ .+|...|++++|+ +.++++|+.|++|++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 3555655 44 6778999999999999874 5799999999998 889999999999999
Q ss_pred EeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecC----
Q 009274 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG---- 352 (538)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 352 (538)
||+.+++.+..+.+|...|.+++|+|++ .++++++.|++|++||+..... ........+. ......+++|++
T Consensus 103 wd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~--~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECK-FSSAEKENHS--DWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEE-EECCTTTSCS--SCEEEEEECCCCCSCS
T ss_pred EECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCce-eeeecccCCC--ceeeeeeecccccccc
Confidence 9999999999999999999999999954 5779999999999999863211 0000001111 223345666665
Q ss_pred ------CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCC-CceeEEEecCCC
Q 009274 353 ------RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSS 423 (538)
Q Consensus 353 ------~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~ 423 (538)
.++++++.|+.|++|| .+.+....+.+|...|.+++|+ +.+|++|+.|+.|++||+++ ......+...
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-- 255 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG-- 255 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS--
T ss_pred ccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC--
Confidence 6899999999999999 4567778889999999999999 55999999999999999954 4444444332
Q ss_pred CceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--cee--eec-----------cccceEEEEEe--CCCEEEEEeCCCeE
Q 009274 424 GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMK--SMQ-----------THKGSVFAVFL--EGKWLFTGGWDKTV 486 (538)
Q Consensus 424 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~--~~~-----------~h~~~v~~~~~--~~~~l~sgs~dg~v 486 (538)
.. ...++|+|++.+++++ .|+.|++||... ... .+. +|...|.+++| ++++|++|+.||.|
T Consensus 256 ~~-v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 256 ST-INQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp SC-EEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred Cc-EEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceE
Confidence 22 3447999999887655 578899999543 211 332 68888999887 89999999999999
Q ss_pred EEEecCCC
Q 009274 487 SVQELAGD 494 (538)
Q Consensus 487 ~iwd~~~~ 494 (538)
++|+++++
T Consensus 334 ~~w~~~~g 341 (343)
T 2xzm_R 334 RTFSFETS 341 (343)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcc
Confidence 99998654
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3e-33 Score=274.78 Aligned_cols=268 Identities=16% Similarity=0.171 Sum_probs=209.0
Q ss_pred ccceeeeeccCcceeEEeec------CCeEEEEEe-------------ecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeC
Q 009274 220 ADIDQARAAGGVKDLVNGLS------KGNVKFKDL-------------QGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSL 279 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~~l-------------~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~ 279 (538)
..|..+.+++++..+++++. ++.+.+|.. .+|...|++++|+ .+.+++++.||+|+|||+
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEI 122 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeec
Confidence 45888999999999999986 566777652 4689999999999 778888999999999999
Q ss_pred CCCceE----EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-E
Q 009274 280 KDFSHV----HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-Y 354 (538)
Q Consensus 280 ~~~~~~----~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 354 (538)
.+++.. ....+|...|.+++|+|+ +.++++|+.|++|++||++++... ..+..+.. ....++++++++ +
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v~iwd~~~~~~~---~~~~~h~~--~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSVKVWDLSQKAVL---KSYNAHSS--EVNCVAACPGKDTI 196 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTTEEE---EEECCCSS--CEEEEEECTTCSSC
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEE---EEEcCCCC--CEEEEEEccCCCce
Confidence 887654 234579999999999995 457899999999999999875433 33333332 223456777765 8
Q ss_pred EEEeeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEE
Q 009274 355 LYTGSGDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (538)
Q Consensus 355 l~sg~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (538)
+++++.||.|++||++++++...+ ..|...+.+++|+ +.+|++|+.|+.|++||+++++.+..+..+. ..+..
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~- 274 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-QNITG- 274 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-SCEEE-
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-eeEEE-
Confidence 999999999999999998877655 4567789999998 3489999999999999999999998887664 34444
Q ss_pred EEEcCCC-CEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCe
Q 009274 430 LSLTAVQ-HTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 430 ~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
++|+|++ ++|++|+.|++|++||... ......+|.+.|++++| ++++|++++.||+|++||+....
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 6999987 6799999999999999653 23344589999999986 68899999999999999997643
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=263.35 Aligned_cols=281 Identities=16% Similarity=0.215 Sum_probs=228.6
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
..+...+.+|.+.|++++|+ +++|++++.||.|++||+.+++.+..+.+|...|.+++|+|+ +.++++++.||.|++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeEEE
Confidence 44667799999999999999 899999999999999999999999999999999999999984 568899999999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC-----CcEEEEECCCCc-----------eeEEecCCCC
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD-----RTIKAWSLLDGT-----------LSCTMSGHKS 383 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~iwd~~~~~-----------~~~~~~~h~~ 383 (538)
||+.+++....+. .. ......+++++++++++++.+ +.|++||+.+.. ....+..|..
T Consensus 101 wd~~~~~~~~~~~---~~---~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 101 WDVSNGQCVATWK---SP---VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EETTTCCEEEEEE---CS---SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred EECCCCcEEEEee---cC---CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 9998765433332 11 223456889999999999999 999999997653 3445556666
Q ss_pred --CeEEEEEe--CCEEEEEecCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--c
Q 009274 384 --AVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--F 456 (538)
Q Consensus 384 --~v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~ 456 (538)
.+.+++|+ ++++++++.||.|++||+++ ++.+..+..+ ...+.. ++|+|++++|++++.||.|++||... .
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISD-MQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEE-EEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeE-EEECCCCCEEEEecCCceEEEEECCCCce
Confidence 99999999 56999999999999999998 6777777665 344444 79999999999999999999999654 4
Q ss_pred eeeeccccceEEEEEe--CCCEEEEEeCCC--------------eEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eC
Q 009274 457 MKSMQTHKGSVFAVFL--EGKWLFTGGWDK--------------TVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQ 519 (538)
Q Consensus 457 ~~~~~~h~~~v~~~~~--~~~~l~sgs~dg--------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 519 (538)
...+. +...+.++.+ +++++++++.++ .+++||..+++....... +...+..+.+ ++
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~s~~ 326 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG-----HFGPLNTVAISPQ 326 (369)
T ss_dssp EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC-----CSSCEEEEEECTT
T ss_pred eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec-----ccCcEEEEEECCC
Confidence 44444 6677877776 899999999998 899999998877655443 2334555555 44
Q ss_pred C-EEEEEECCCeEEEEEcC
Q 009274 520 G-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 520 ~-~l~sg~~dg~v~vw~~~ 537 (538)
+ .|++|+.||.|++|++.
T Consensus 327 ~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 327 GTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp SSEEEEEETTSEEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECc
Confidence 4 58889999999999985
No 47
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-33 Score=281.95 Aligned_cols=290 Identities=14% Similarity=0.176 Sum_probs=215.3
Q ss_pred EEEEEe-ecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC---Cc---eEEEEecCCcCeEEEEEecCCCCEEEEEc
Q 009274 243 VKFKDL-QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD---FS---HVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (538)
Q Consensus 243 ~~i~~l-~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~---~~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 312 (538)
..+..+ ++|.+.|++++|+ +++|++|+.||+|++||+.+ +. ....+ .|...|.+++|+| ++.++++++
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s 130 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP-NFDAFAVSS 130 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-TSSEEEEEE
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-CCCEEEEEe
Confidence 456677 8999999999998 57999999999999999876 33 33444 4999999999998 556889999
Q ss_pred CCCcEEEEEcc---CCCCCccee-----eec--c--cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC
Q 009274 313 SGGGIFVWSFS---FPLGHEPLK-----KWN--E--EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG 380 (538)
Q Consensus 313 ~dg~i~vwd~~---~~~~~~~~~-----~~~--~--~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 380 (538)
.||.|++||+. ++....... ... . ...........++++++++++|+.|+.|++||+++++.+..+.+
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 99999999995 332211111 111 0 11111111112456788999999999999999999999999988
Q ss_pred --CCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEc----CCCCEEEEEeCCCcEEEEe
Q 009274 381 --HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT----AVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 381 --h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~dg~i~iwd 452 (538)
|...|++++|+ +.+|++|+.||.|++||+++++.+..+...+...+.. ++++ +++.++++|+.||.|++||
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH-VEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE-EEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE-EEeccccCCCccEEEEEcCCCcEEEEE
Confidence 89999999998 5699999999999999999999988886444444443 5444 5688999999999999999
Q ss_pred CCc--ceeeecc--------------------------ccceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecC
Q 009274 453 NDK--FMKSMQT--------------------------HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPT 503 (538)
Q Consensus 453 ~~~--~~~~~~~--------------------------h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~ 503 (538)
..+ ....+.+ |...|.++++ ++++|++|+.||.|++||+.+++........
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecc
Confidence 653 3333332 6666777777 7789999999999999999887644333321
Q ss_pred C--------------------------------cccCCCceEEEEEe-C--C-EEEEEECCCeEEEEE
Q 009274 504 G--------------------------------AIPCGSVITALLYW-Q--G-KLFVGCADRTVKVYY 535 (538)
Q Consensus 504 ~--------------------------------~~~~~~~~~~~~~~-~--~-~l~sg~~dg~v~vw~ 535 (538)
. ...+...+.++.+. + + .|++|+.||.|+||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0 00134455555443 3 3 588999999999995
No 48
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.1e-32 Score=290.23 Aligned_cols=284 Identities=24% Similarity=0.385 Sum_probs=217.0
Q ss_pred EEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC-----ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc
Q 009274 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-----SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
...+++|.+.|++++|+ +++|+||+.|++|++||+.+. .....+.+|...|.+++|+|+ +.++++|+.||+
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGE 453 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC-CCEEEEEeCCCc
Confidence 34689999999999998 579999999999999998753 456788999999999999985 568899999999
Q ss_pred EEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEEEEeC-
Q 009274 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTLAVCN- 392 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~~~- 392 (538)
|++||+.++... ..+..|.. ....+++++++++|++|+.|++|++||.......... .+|...|.+++|++
T Consensus 454 v~vwd~~~~~~~---~~~~~h~~--~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 454 LRLWDLAAGVST---RRFVGHTK--DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEETTTTEEE---EEEECCSS--CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred EEEEECCCCcce---eEEeCCCC--CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 999999865433 33333332 2234578899999999999999999998654433322 46889999999982
Q ss_pred ---CEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceE
Q 009274 393 ---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSV 467 (538)
Q Consensus 393 ---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v 467 (538)
..+++++.|++|++||+++++....+..|. +.+.+ ++++|++++|++|+.||.|++||..+ .+..+. +...+
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-~~v~~-v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v 605 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT-GYVST-VAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVI 605 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEE-EEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcE
Confidence 379999999999999999999888887663 44444 79999999999999999999999654 344444 34578
Q ss_pred EEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcc--------------cCCCceEEEEE-eCC-EEEEEECCC
Q 009274 468 FAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI--------------PCGSVITALLY-WQG-KLFVGCADR 529 (538)
Q Consensus 468 ~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~-~l~sg~~dg 529 (538)
.++++ ++.++++++ |+.|++||+.++............ .....+..+.+ +++ .|++|+.||
T Consensus 606 ~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp EEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 88877 666666655 667999999998766544321110 01112444544 454 588999999
Q ss_pred eEEEEEcCC
Q 009274 530 TVKVYYYGK 538 (538)
Q Consensus 530 ~v~vw~~~~ 538 (538)
.|++|+++.
T Consensus 685 ~i~iW~i~~ 693 (694)
T 3dm0_A 685 VIRVWGIGR 693 (694)
T ss_dssp EEEEEEC--
T ss_pred eEEEEeccC
Confidence 999999863
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.3e-32 Score=274.35 Aligned_cols=258 Identities=24% Similarity=0.427 Sum_probs=219.9
Q ss_pred cCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEE
Q 009274 229 GGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVV 299 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 299 (538)
.++..++++..++.+++|+ +.+|.+.|++++|+++++++|+.||+|++||+.+++.+..+.+|...|.+++
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 3678899999999999987 4589999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec
Q 009274 300 YVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (538)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 379 (538)
|++ .++++|+.||.|++||+.++...........+.. .+.++.++++++++|+.||.|++||+++++.+..+.
T Consensus 221 ~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 221 FNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA----AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp CCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS----CEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC----cEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEc
Confidence 953 4889999999999999987665433333333332 356777799999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--c--
Q 009274 380 GHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--K-- 455 (538)
Q Consensus 380 ~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~-- 455 (538)
+|...|.++.++++++++|+.||.|++||+++++.+..+..+. ..+.. +++ ++.++++|+.||.|++||.. .
T Consensus 294 ~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~-~~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 294 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRC-IRF--DNKRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE-EEC--CSSEEEEEETTSCEEEEEHHHHTST
T ss_pred CCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-CcEEE-EEe--cCCEEEEEeCCCcEEEEECCCCCCc
Confidence 9999999999999999999999999999999999999888654 33333 344 88999999999999999943 1
Q ss_pred -------ceeeeccccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeE
Q 009274 456 -------FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFE 497 (538)
Q Consensus 456 -------~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~ 497 (538)
....+.+|.+.|.++++++++|++|+.||.|++||+.+....
T Consensus 370 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 370 RAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp TSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC-------
T ss_pred cccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 577888999999999999999999999999999999876543
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7e-33 Score=280.04 Aligned_cols=283 Identities=12% Similarity=0.114 Sum_probs=207.1
Q ss_pred EeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceE--EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 247 DLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHV--HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
...+|...|+|++|+ +++||+|+.||+|+|||+.+++.. ..+.+|.+.|++++|+|.++.+|++|+.||+|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 456799999999998 679999999999999999877654 445689999999999998888999999999999999
Q ss_pred ccCCCCCcceeeecc-cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEE
Q 009274 322 FSFPLGHEPLKKWNE-EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYS 397 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s 397 (538)
+++.. ...... +.........++++++++|++|+.||.|++||++ ++.+..+.+|...|++++|+ +.++++
T Consensus 194 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 194 FKGNI----LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp TTSCE----EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred ccCCc----eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEE
Confidence 97532 111111 1111223356888999999999999999999986 46677889999999999998 238889
Q ss_pred EecCCcEEEEECCCCceeEEEe--cCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccce------E
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLE--EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGS------V 467 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~------v 467 (538)
|+.|++|++||+++.+....+. ..|...+.. ++|+|++++|++++.||.|++||... ....+..|... +
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNA-ACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEE-CCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccc-eeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccccee
Confidence 9999999999999876544332 223444444 68999999999999999999999653 44444444321 1
Q ss_pred EEE--EeCCCEEEEEe------------CCCeEEEEecCCCeeEeeeecCCcccCCCceEEE-EEeCCEEEEEECCCeEE
Q 009274 468 FAV--FLEGKWLFTGG------------WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQGKLFVGCADRTVK 532 (538)
Q Consensus 468 ~~~--~~~~~~l~sgs------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~sg~~dg~v~ 532 (538)
... .+++..+++++ .++.|++||..+++......... ...+.... +.+++.+++++.|+.|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~---~~~v~s~~~fspdg~~lasg~d~~i~ 424 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE---SSGISSLNEFNPMGDTLASAMGYHIL 424 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS---CCCCCCEEEECTTSSCEEEECSSEEE
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC---CCcEEEEEEECCCCCEEEEEcCCcEE
Confidence 111 22444444443 34679999999988765543221 22233333 45677766666799999
Q ss_pred EEEcCC
Q 009274 533 VYYYGK 538 (538)
Q Consensus 533 vw~~~~ 538 (538)
||++.+
T Consensus 425 iW~~~~ 430 (435)
T 4e54_B 425 IWSQQE 430 (435)
T ss_dssp ECCCC-
T ss_pred EEECCc
Confidence 999863
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-32 Score=259.96 Aligned_cols=243 Identities=14% Similarity=0.230 Sum_probs=195.7
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC--CceEEEEecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD--FSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVW 320 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vw 320 (538)
..+.+|.+.|++++|+ +++|++|+.|++|+|||+.+ .+.+.++.+|.++|.+++|+++ ++.+|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 3578999999999999 99999999999999999974 4678899999999999999864 46799999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC----
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN---- 392 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~---- 392 (538)
|++++.... +.....+.. ....++++|+ +.+|++|+.|+.|++||++++. ....+.+|...|.+++|++
T Consensus 83 d~~~~~~~~-~~~~~~h~~--~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 83 KEENGRWSQ-IAVHAVHSA--SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EBSSSCBCC-CEEECCCSS--CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EcCCCceEE-EEEeecCCC--ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 998654221 222222222 2334577776 7899999999999999998763 2456788999999999984
Q ss_pred -----------CEEEEEecCCcEEEEECCCCc----eeEEEecCCCCceEEEEEEcCCC---CEEEEEeCCCcEEEEeCC
Q 009274 393 -----------GVLYSGSRDGTIRLWSLSDHS----LLTVLEEDSSGAVSSVLSLTAVQ---HTLVVSHESGSIKVWRND 454 (538)
Q Consensus 393 -----------~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~iwd~~ 454 (538)
.+|++|+.|++|++||+++++ ....+..| ...+.. ++|+|++ .+|++++.|++|++||..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~-v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRD-VAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEE-EEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEE-EEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 389999999999999998876 44555554 444444 6999984 899999999999999965
Q ss_pred cc-----eeee--ccccceEEEEEe--CCCEEEEEeCCCeEEEEecCC
Q 009274 455 KF-----MKSM--QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 455 ~~-----~~~~--~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~ 493 (538)
.. ...+ ..|...|.+++| ++++|++++.||.|++|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 31 1233 467889998887 899999999999999999863
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.1e-32 Score=266.00 Aligned_cols=283 Identities=13% Similarity=0.100 Sum_probs=221.2
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
+..|.++|++++|+ +++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|+ +.++++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEEECC
Confidence 45699999999999 8899999999999999999987 88999999999999999994 5688999999999999997
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCce---e-EEecCCCCCeEEEEEe--CCEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL---S-CTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~---~-~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
+......... ..+. ......+++++++++++++.|+.|++||++.++. . .....|...|.+++|+ ++++++
T Consensus 83 ~~~~~~~~~~-~~~~--~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 83 GRTWKPTLVI-LRIN--RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp TTEEEEEEEC-CCCS--SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred CCeeeeeEEe-ecCC--CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 6542222111 1111 2234567888999999999999999999988763 2 3336789999999999 559999
Q ss_pred EecCCcEEEEECC------------------CCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccce
Q 009274 398 GSRDGTIRLWSLS------------------DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFM 457 (538)
Q Consensus 398 ~s~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~ 457 (538)
++.|+.|++||++ .++.+..+..+ ...+.. ++|+|++++|++++.||.|++||. .+.+
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHG-VCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEE-EEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEE-EEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 9999999999954 56777777654 334444 799999999999999999999995 4577
Q ss_pred eeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCC--CeeEeeee--------------------------------
Q 009274 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG--DEFEEDVI-------------------------------- 501 (538)
Q Consensus 458 ~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~--~~~~~~~~-------------------------------- 501 (538)
..+..|...+.++.+ ++.++++| .|+.|++|++.+ +.......
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcc
Confidence 888899999998877 77777777 999999999987 43211000
Q ss_pred --cCCcccCCCceEEEE-Ee-C----CEEEEEECCCeEEEEEcC
Q 009274 502 --PTGAIPCGSVITALL-YW-Q----GKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 502 --~~~~~~~~~~~~~~~-~~-~----~~l~sg~~dg~v~vw~~~ 537 (538)
......+...+.++. ++ + ..|++|+.||.|++|++.
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 000012444566664 53 5 479999999999999974
No 53
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.3e-32 Score=264.27 Aligned_cols=290 Identities=18% Similarity=0.240 Sum_probs=214.8
Q ss_pred eEEEEEeecCCCcEEEEEEc--CC-EEEEEeC---CCcEEEEeCCCCceEEEE-ecCCcCeEEEEEecCC--CCEEEEEc
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GG-FLFSSSF---DKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDED--QPLCISGD 312 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~-~l~s~s~---dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~--~~~l~s~~ 312 (538)
.+....+++|.+.|++++|+ ++ ++++|+. ||.|++||+.+++..... .+|...|.+++|+|++ +.++++++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 34445678899999999999 54 5556665 999999999998876543 3799999999999974 67889999
Q ss_pred CCCcEEEEEccCCCCCcceeeecccCCceeeeEE-----EEeecCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCC---
Q 009274 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIH-----ALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKS--- 383 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~sg~~dg~i~iwd~~~~~-~~~~~~~h~~--- 383 (538)
.||.|++||+.++.. ....+..+.. ....+. ++++++++|++|+.||.|++||+++++ .+..+..|.+
T Consensus 88 ~dg~i~iwd~~~~~~--~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEM--PVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp TTSCEEEECTTSCSS--CSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred CCCeEEEEeCCCCCc--cEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 999999999987651 2233333332 122121 346789999999999999999999887 7777766554
Q ss_pred -CeEEEEE----e--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC---CCCEEEEEeCCCcEEEEeC
Q 009274 384 -AVSTLAV----C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA---VQHTLVVSHESGSIKVWRN 453 (538)
Q Consensus 384 -~v~~l~~----~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~dg~i~iwd~ 453 (538)
.+.+++| + +.++++++.|+.|++||+++++....... ...+. .+.|+| +++++++++.||.|++||.
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI--KNGVC-SLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEE-EEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC--CCceE-EEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 8999984 4 56999999999999999999887555432 33444 479999 9999999999999999995
Q ss_pred Cc--ceeee-----ccccceEEEEEe--CCC-EEEEEeCCCeEEEEecCCCeeEee---------------eecCCcccC
Q 009274 454 DK--FMKSM-----QTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDEFEED---------------VIPTGAIPC 508 (538)
Q Consensus 454 ~~--~~~~~-----~~h~~~v~~~~~--~~~-~l~sgs~dg~v~iwd~~~~~~~~~---------------~~~~~~~~~ 508 (538)
+. ....+ .+|...|.++.+ +++ +|++++.||.|++||+........ ..... ..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 320 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV-TLS 320 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE-ECC
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc-ccC
Confidence 43 33333 489999999987 666 899999999999999975432110 00000 013
Q ss_pred CCceEEEEE-eCCE-EE-EEECCCeEEEEEcCC
Q 009274 509 GSVITALLY-WQGK-LF-VGCADRTVKVYYYGK 538 (538)
Q Consensus 509 ~~~~~~~~~-~~~~-l~-sg~~dg~v~vw~~~~ 538 (538)
...+..+.+ +++. |+ +|+.||.|++|++.+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 345555555 4544 66 799999999999864
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-33 Score=276.16 Aligned_cols=238 Identities=13% Similarity=0.108 Sum_probs=184.5
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC--ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
++.|.++|++++|+ +++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++ .++++++.|++|++||+.
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcC
Confidence 44577899999999 899999999999999999988 7788899999999999999965 577999999999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc---eeEEecC-CCCCeEEEEEe--CCEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSG-HKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~---~~~~~~~-h~~~v~~l~~~--~~~l~s 397 (538)
++...........+.. .....++++++++|++|+.|+.|++||+++++ ....+.+ |...|.+++|+ +++|++
T Consensus 86 ~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNR--AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ---CCCCEEECCCCSS--CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeeEecccCC--ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 7662233333333322 23355778899999999999999999999887 4677777 99999999999 459999
Q ss_pred EecCCcEEEEECCC------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--c-
Q 009274 398 GSRDGTIRLWSLSD------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--F- 456 (538)
Q Consensus 398 ~s~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~- 456 (538)
++.|+.|++||++. ++.+..+ .+...+.. ++|+|++++|++++.||.|++||... .
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~-~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHA-VGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEE-EEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEE-EEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 99999999999963 3344444 33444444 79999999999999999999999543 3
Q ss_pred ---eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 457 ---MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 457 ---~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+..+.+|...|.+++| ++++|++|+.|+.+ +|+..
T Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 241 PRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred ceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 6788899999999877 88899988876666 66654
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-32 Score=270.40 Aligned_cols=284 Identities=13% Similarity=0.232 Sum_probs=215.6
Q ss_pred EeecCCCcEEEEEEc------CCEEEEEeCCCcEEEEeCCCCceEEEEec-----CCcCeEEEEEecCC---CCEEEEEc
Q 009274 247 DLQGHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-----HDHKVMAVVYVDED---QPLCISGD 312 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~---~~~l~s~~ 312 (538)
...+|.++|++++|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+. +.++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 356899999999998 35577777788999999998888777764 55789999999974 35889999
Q ss_pred CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEE
Q 009274 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTL 388 (538)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l 388 (538)
.||.|++||+.+++... .+..+. ......++++ +++++++|+.||.|++||+++++.+..+ .+|...|.++
T Consensus 93 ~dg~i~v~d~~~~~~~~---~~~~~~--~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 SRGIIRIINPITMQCIK---HYVGHG--NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp TTCEEEEECTTTCCEEE---EEESCC--SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred CCCEEEEEEchhceEee---eecCCC--CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 99999999998764432 333222 2233457788 8889999999999999999999998888 7899999999
Q ss_pred EEe--CCEEEEEecCCcEEEEECCCCceeEEEec---------------------------CCCCceEEEEEEcCCCCEE
Q 009274 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEE---------------------------DSSGAVSSVLSLTAVQHTL 439 (538)
Q Consensus 389 ~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~l 439 (538)
+|+ ++++++++.|+.|++||+++++....+.. .+...+.. +.++ ++++
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~--~~~l 244 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC-VRWL--GDLI 244 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE-EEEE--TTEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE-EEEc--CCEE
Confidence 999 56999999999999999998765433321 12333443 5666 7799
Q ss_pred EEEeCCCcEEEEeCCc----------------ceeeeccccceEEEEEe--C--CCEEEEEeCCCeEEEEecCCCeeEee
Q 009274 440 VVSHESGSIKVWRNDK----------------FMKSMQTHKGSVFAVFL--E--GKWLFTGGWDKTVSVQELAGDEFEED 499 (538)
Q Consensus 440 ~~~~~dg~i~iwd~~~----------------~~~~~~~h~~~v~~~~~--~--~~~l~sgs~dg~v~iwd~~~~~~~~~ 499 (538)
++++.||.|++||..+ .+..+..|...|.++.+ + +++|++|+.||.|++||+.+++....
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 9999999999999543 25566778888877754 7 99999999999999999998753210
Q ss_pred -eecCCcccCCCceEEEEEe-CC-EEEEEECCCeEEEEEcCC
Q 009274 500 -VIPTGAIPCGSVITALLYW-QG-KLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 500 -~~~~~~~~~~~~~~~~~~~-~~-~l~sg~~dg~v~vw~~~~ 538 (538)
........+...+..+.+. ++ .|++|+.||.|++||+.+
T Consensus 325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 0011111123456665554 44 588899999999999864
No 56
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.9e-31 Score=302.95 Aligned_cols=307 Identities=16% Similarity=0.233 Sum_probs=247.1
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~ 287 (538)
...+..+.+++++..++++..++.+.+|+ +.+|.+.|++++|+ ++++++++.||+|++||+.+++.+..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 45688899999999999999999999987 46899999999999 89999999999999999999999999
Q ss_pred EecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEE
Q 009274 288 FKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (538)
Q Consensus 288 ~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~i 366 (538)
+.+|...|.+++|+|+ +..++++|+.||.|++||+.++.... ....+.. .....+++|+++++++|+.||.|++
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~--~v~~~~~sp~~~~l~s~s~dg~v~v 769 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTN--SVNHCRFSPDDELLASCSADGTLRL 769 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSS--CEEEEEECSSTTEEEEEESSSEEEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh---eecCCCC--CEEEEEEecCCCEEEEEECCCeEEE
Confidence 9999999999999986 45688999999999999998765332 2223322 2335688999999999999999999
Q ss_pred EECCCCceeEEe-------------------------------------------------------cCCCCCeEEEEEe
Q 009274 367 WSLLDGTLSCTM-------------------------------------------------------SGHKSAVSTLAVC 391 (538)
Q Consensus 367 wd~~~~~~~~~~-------------------------------------------------------~~h~~~v~~l~~~ 391 (538)
||+++++....+ .+|...|.+++|+
T Consensus 770 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s 849 (1249)
T 3sfz_A 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849 (1249)
T ss_dssp EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC
T ss_pred EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc
Confidence 998776543322 2677889999999
Q ss_pred --CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---------------
Q 009274 392 --NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------------- 454 (538)
Q Consensus 392 --~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--------------- 454 (538)
+.++++++.|+.|++||+.++..+..+..+. ..+.. ++|+|+++++++++.||.|++||..
T Consensus 850 p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-~~v~~-v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 927 (1249)
T 3sfz_A 850 PYDHLAVIALSQYCVELWNIDSRLKVADCRGHL-SWVHG-VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEID 927 (1249)
T ss_dssp SSTTEEEEECSSSCEEEEETTTTEEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCc-cceEE-EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceee
Confidence 5699999999999999999998888887653 34443 6888888888888888888888721
Q ss_pred ------------------------------------------------------------------cceeeeccccceEE
Q 009274 455 ------------------------------------------------------------------KFMKSMQTHKGSVF 468 (538)
Q Consensus 455 ------------------------------------------------------------------~~~~~~~~h~~~v~ 468 (538)
+....+.+|...|.
T Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~ 1007 (1249)
T 3sfz_A 928 VVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVR 1007 (1249)
T ss_dssp EEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCC
T ss_pred EEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceE
Confidence 12234456777887
Q ss_pred EEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 469 AVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 469 ~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++.| ++++|++++.||.|++||+.+++......+ ...+....+.+++.+++++.||.|++||+.
T Consensus 1008 ~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1008 HIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAH-----QETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCC-----SSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecC-----CCcEEEEEEcCCCcEEEEECCCcEEEEECC
Confidence 7776 888999999999999999998876543222 222334445568889999999999999975
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-31 Score=263.94 Aligned_cols=269 Identities=11% Similarity=0.134 Sum_probs=216.4
Q ss_pred ccceeeeecc----CcceeEEeecCCeEEEEEee--------------cCCCcEEEEEEc------CCEEEEEeCCCcEE
Q 009274 220 ADIDQARAAG----GVKDLVNGLSKGNVKFKDLQ--------------GHRDCVTGLAVG------GGFLFSSSFDKSIH 275 (538)
Q Consensus 220 ~~~~~~~~~~----~~~~~~~~~~~~~~~i~~l~--------------~h~~~V~~l~~~------~~~l~s~s~dg~i~ 275 (538)
..+..+.+.+ +...++++..++.+.+|++. .|...|++++|+ +++|++|+.||.|+
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 3467777776 35567777777788888854 266889999998 24899999999999
Q ss_pred EEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEE
Q 009274 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL 355 (538)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 355 (538)
+||+.+++.+..+.+|...|.+++|+|+++.++++++.||.|++||+.+++....+.....+. ......+++++++++
T Consensus 99 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 99 IINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR--DEVLSADYDLLGEKI 176 (366)
T ss_dssp EECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS--SCEEEEEECTTSSEE
T ss_pred EEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc--CceeEEEECCCCCEE
Confidence 999999999999999999999999999777899999999999999998654333222112222 223356788899999
Q ss_pred EEeeCCCcEEEEECCCCceeEEec----------------------------CCCCCeEEEEEeCCEEEEEecCCcEEEE
Q 009274 356 YTGSGDRTIKAWSLLDGTLSCTMS----------------------------GHKSAVSTLAVCNGVLYSGSRDGTIRLW 407 (538)
Q Consensus 356 ~sg~~dg~i~iwd~~~~~~~~~~~----------------------------~h~~~v~~l~~~~~~l~s~s~dg~i~iw 407 (538)
++++.||.|++||+++++....+. +|...|.+++|+++++++++.|+.|++|
T Consensus 177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~w 256 (366)
T 3k26_A 177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCW 256 (366)
T ss_dssp EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEE
T ss_pred EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEE
Confidence 999999999999999876554433 3999999999998899999999999999
Q ss_pred ECCCCce--------------eEEEecCCCCceEEEEEEcCC--CCEEEEEeCCCcEEEEeCCc------ceeeeccc--
Q 009274 408 SLSDHSL--------------LTVLEEDSSGAVSSVLSLTAV--QHTLVVSHESGSIKVWRNDK------FMKSMQTH-- 463 (538)
Q Consensus 408 d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~------~~~~~~~h-- 463 (538)
|+++++. +..+..+.. .+.. ++++|+ +++|++|+.||.|++||... ....+..|
T Consensus 257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~-~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 257 KPGKMEDDIDKIKPSESNVTILGRFDYSQC-DIWY-MRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp EESSTTCCGGGCCTTCCCEEEEEEEECSSC-CSSC-CCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC
T ss_pred eCCCccccccccccCCcchheeccccccCC-cEEE-EEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccccc
Confidence 9988754 555555433 2332 578888 99999999999999999654 33467777
Q ss_pred cceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 464 KGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 464 ~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
...|.+++| ++++|++++.||.|++||+.
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 789999988 89999999999999999985
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-30 Score=251.62 Aligned_cols=271 Identities=17% Similarity=0.240 Sum_probs=231.4
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
..+..+.+++++..++++..++.+.+|+ +.+|.+.|++++|+ +++|++++.||.|++||+.+++.+..+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW 112 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 4578888999999999999999999987 46799999999999 899999999999999999999999988
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCC-----CcEEEEEccCCCCCcceeeec--------ccCCceeeeEEEEeecCCEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSG-----GGIFVWSFSFPLGHEPLKKWN--------EEKDWRYSGIHALTTSGRYL 355 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l 355 (538)
. |...|.+++|+|++ .++++++.+ |.|++||+........+.... .+.........+++++++++
T Consensus 113 ~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 113 K-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp E-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEE
T ss_pred e-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEE
Confidence 8 88999999999955 577888888 999999998776543333221 22221244566888999999
Q ss_pred EEeeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 009274 356 YTGSGDRTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (538)
Q Consensus 356 ~sg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (538)
++++.||.|++||+++ ++.+..+..|...|.+++|+ +.+|++++.|+.|++||+++++.+..+... ..+. .+.+
T Consensus 191 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~-~~~~ 267 (369)
T 3zwl_B 191 IAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--CPLN-TAVI 267 (369)
T ss_dssp EEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEE-EEEE
T ss_pred EEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--CCce-eEEe
Confidence 9999999999999998 78888999999999999998 559999999999999999999998888732 3333 4799
Q ss_pred cCCCCEEEEEeCCC--------------cEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 433 TAVQHTLVVSHESG--------------SIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 433 ~~~~~~l~~~~~dg--------------~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+|+++++++++.++ .+++||. .+....+.+|...|.++++ ++++|++++.||.|++|+++.+
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 99999999999988 8999995 4577788999999999988 8999999999999999999865
Q ss_pred e
Q 009274 495 E 495 (538)
Q Consensus 495 ~ 495 (538)
.
T Consensus 348 ~ 348 (369)
T 3zwl_B 348 Y 348 (369)
T ss_dssp H
T ss_pred c
Confidence 4
No 59
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-31 Score=281.49 Aligned_cols=267 Identities=21% Similarity=0.348 Sum_probs=212.6
Q ss_pred CccceeeeeccCc-ceeEEeecCCeEEEEE--------------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC
Q 009274 219 GADIDQARAAGGV-KDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD 281 (538)
Q Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~--------------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~ 281 (538)
...|.++.+.+.+ ..+++++.++.+++|+ +.+|...|++++|+ +++|++|+.||+|++||+.+
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 3456777776654 6788999999999996 45799999999999 89999999999999999999
Q ss_pred CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecC--CEEEEee
Q 009274 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLYTGS 359 (538)
Q Consensus 282 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~ 359 (538)
++....+.+|...|.+++|+|++. ++++|+.|++|++||...............+. ....+.++++++ ..+++|+
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHR--DWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCS--SCEEEEEECSCSSSCEEEEEE
T ss_pred CcceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCC--CcEEEEEEeCCCCcceEEEEe
Confidence 999999999999999999999654 67999999999999975321111111111111 223456777776 5899999
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCC
Q 009274 360 GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH 437 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (538)
.|++|++||+++++....+.+|.+.|++++|+ +++|++|+.|++|++||+++++.+..+..+ .. ...++|+|++.
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~-v~~~~~sp~~~ 615 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SV-IHALCFSPNRY 615 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--SC-EEEEEECSSSS
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--Cc-EEEEEEcCCCc
Confidence 99999999999999999999999999999999 569999999999999999999888776543 23 44479999998
Q ss_pred EEEEEeCCCcEEEEeCCc--ceeeeccc-------------------cceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 438 TLVVSHESGSIKVWRNDK--FMKSMQTH-------------------KGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 438 ~l~~~~~dg~i~iwd~~~--~~~~~~~h-------------------~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
++++++ ++.|++||... .+..+..+ ...+.+++| +|++|++|+.||.|++||+.
T Consensus 616 ~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 616 WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 887766 55699999654 33333221 113566766 89999999999999999985
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.7e-32 Score=270.63 Aligned_cols=274 Identities=20% Similarity=0.268 Sum_probs=212.8
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..+++++|+ +++|++++.||.|++||+.+++....+..| .+..+.+.+.++.++++|+.||.|++||+.++..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ--- 131 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE---
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce---
Confidence 344578888 899999999999999999887776666655 4455544444667889999999999999875432
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEE
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd 408 (538)
......+. .....++++|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+ +++|++++.|+.|++||
T Consensus 132 ~~~~~~h~--~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 132 REIDQAHV--SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEETTSSS--SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eeeccccc--CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 22222222 223456788899999999999999999999999999999999999999999 55999999999999999
Q ss_pred CCCCceeEEEecCC--CCceEEE--------------------EEEcCCCCEEEEEeCCCcEEEEeCCc--ceeee-ccc
Q 009274 409 LSDHSLLTVLEEDS--SGAVSSV--------------------LSLTAVQHTLVVSHESGSIKVWRNDK--FMKSM-QTH 463 (538)
Q Consensus 409 ~~~~~~~~~~~~~~--~~~~~~~--------------------~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~-~~h 463 (538)
+++++.+..+..+. ...+..+ ++|+|+++++++|+.||.|++||.+. ....+ ..|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF 289 (420)
T ss_dssp TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc
Confidence 99999988887531 2222221 34578999999999999999999654 33333 458
Q ss_pred cceEEEEEe--CCC-EEEEEeCCCeEEEEecCCCee-EeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 464 KGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDEF-EEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 464 ~~~v~~~~~--~~~-~l~sgs~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
...|.++++ ++. +|++|+.||.|++||+.+++. ...... ++...+..++++++. |++++.||.|++|++.
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI----NEGTPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE----STTSCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc----cCCCCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 889999988 666 999999999999999988643 222221 134467777787664 7889999999999975
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-30 Score=260.29 Aligned_cols=281 Identities=16% Similarity=0.180 Sum_probs=218.8
Q ss_pred EEEEeecCCCc--EEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 244 KFKDLQGHRDC--VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 244 ~i~~l~~h~~~--V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
++.+..+|.+. +.+++|+++.+++++.|+.|++||+.+++....+.. |...|.+++|+| ++.++++|+.||.|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred eeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEE
Confidence 34556677665 556788877788999999999999999999888876 889999999999 45688999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEe--CCEEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (538)
|+.+++... .+..+. ..+.++.++++++++|+.||.|++||++ ....+..+.+|...|.+++|+ +.++++
T Consensus 162 d~~~~~~~~---~~~~~~----~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 162 DVESQTKLR---TMAGHQ----ARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp ETTTCCEEE---EECCCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ECcCCeEEE---EecCCC----CceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 998764333 222222 2356777789999999999999999998 566788889999999999999 559999
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC-CEEEEEe--CCCcEEEEeCC--cceeeeccccceEEEEEe
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSH--ESGSIKVWRND--KFMKSMQTHKGSVFAVFL 472 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~--~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~ 472 (538)
|+.|+.|++||+++++.+..+..+. ..+.. ++|+|++ .++++++ .|+.|++||.. +....+. |...+.++.|
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~-~~v~~-~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~ 311 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHN-AAVKA-VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIW 311 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCS-SCCCE-EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCc-ceEEE-EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEE
Confidence 9999999999999999888887653 33343 6899976 5666655 69999999954 3455554 5678888887
Q ss_pred --CCCEEEEE--eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEcC
Q 009274 473 --EGKWLFTG--GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 --~~~~l~sg--s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
++++++++ +.||.|++||+.+++......... +...+....+.+++ .|++++.||.|++|++.
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~--h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA--HDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC--CSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 88999984 489999999999876554432211 12233344444555 58889999999999985
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.1e-30 Score=270.10 Aligned_cols=310 Identities=16% Similarity=0.160 Sum_probs=228.1
Q ss_pred CccceeeeeccCcc-eeEEeecCCeEEEEE---------eecCCC---cEEEEEEc---CCEEEEEeCCCcEEEEeCCCC
Q 009274 219 GADIDQARAAGGVK-DLVNGLSKGNVKFKD---------LQGHRD---CVTGLAVG---GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~---------l~~h~~---~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~ 282 (538)
...+..+.+.+++. .++++..++.+.+|+ +.+|.+ .|++++|+ ++++++++.||.|++||+.++
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 44577888888887 788999999998887 457999 99999998 579999999999999999999
Q ss_pred ceEEEE-e---cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEe
Q 009274 283 SHVHTF-K---GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTG 358 (538)
Q Consensus 283 ~~~~~~-~---~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 358 (538)
+.+..+ . .|...|.+++|+ ++.++++++.||.|++||+.+++....+............ ...+ +++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~ 315 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV-GVVA-TGNGRIISL 315 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE-EEEE-EETTEEEEE
T ss_pred CEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee-EEEe-CCCCeEEEE
Confidence 999999 6 899999999998 6678899999999999999876443333222111111111 2233 388899999
Q ss_pred eCCCcEEEEECCCCceeEEecCCCCCeEEEEE---------------------------------e-CCEEEEEecCC--
Q 009274 359 SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV---------------------------------C-NGVLYSGSRDG-- 402 (538)
Q Consensus 359 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---------------------------------~-~~~l~s~s~dg-- 402 (538)
+.||.|++||+.+++.+..+.+|...|.+++| . ++.+++++.|+
T Consensus 316 ~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i 395 (615)
T 1pgu_A 316 SLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTL 395 (615)
T ss_dssp ETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEE
T ss_pred ECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCE
Confidence 99999999999988887777766655555544 2 23444444444
Q ss_pred ------------------------------------------------------------------------cEEEEECC
Q 009274 403 ------------------------------------------------------------------------TIRLWSLS 410 (538)
Q Consensus 403 ------------------------------------------------------------------------~i~iwd~~ 410 (538)
.|++||+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~ 475 (615)
T 1pgu_A 396 KVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS 475 (615)
T ss_dssp EETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETT
T ss_pred EEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECC
Confidence 44444444
Q ss_pred CCcee-EEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeecc-ccceEEEEEe------------CC
Q 009274 411 DHSLL-TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQT-HKGSVFAVFL------------EG 474 (538)
Q Consensus 411 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~-h~~~v~~~~~------------~~ 474 (538)
+++.. ..+. .+...+. .++|+|++++|++++.||.|++||.. +.+..+.+ |...|.+++| ++
T Consensus 476 ~~~~~~~~~~-~~~~~v~-~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~ 553 (615)
T 1pgu_A 476 DLEVSFDLKT-PLRAKPS-YISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 553 (615)
T ss_dssp EEEEEEECSS-CCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC
T ss_pred CccccccccC-CccCceE-EEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC
Confidence 33322 1111 2233333 47999999999999999999999964 45666777 9999999886 78
Q ss_pred CEEEEEeCCCeEEEEecCCC-eeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcCC
Q 009274 475 KWLFTGGWDKTVSVQELAGD-EFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~~ 538 (538)
++|++++.||.|++||+.++ +....... +...+....+.+++.|++++.||.|++|++++
T Consensus 554 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 554 DLVATGSLDTNIFIYSVKRPMKIIKALNA----HKDGVNNLLWETPSTLVSSGADACIKRWNVVL 614 (615)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTS----STTCEEEEEEEETTEEEEEETTSCEEEEEEC-
T ss_pred CEEEEEcCCCcEEEEECCCCceechhhhc----CccceEEEEEcCCCCeEEecCCceEEEEeeec
Confidence 99999999999999999986 43332221 12334444555677788999999999999863
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.3e-32 Score=261.39 Aligned_cols=241 Identities=17% Similarity=0.228 Sum_probs=189.2
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEEE
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd 321 (538)
.+.+|.++|++++|+ +++|++|+.|++|++||+.+++ .+..+++|.+.|.+++|+++ ++.+|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 367999999999998 8999999999999999998775 46789999999999999864 467889999999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCCce---eEEecCCCCCeEEEEEeC----
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTL---SCTMSGHKSAVSTLAVCN---- 392 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~~---- 392 (538)
++++... ....+..+.. ....++++|+ +.+|++|+.|++|++||++++.. ...+.+|...|.+++|++
T Consensus 88 ~~~~~~~-~~~~~~~h~~--~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 88 EENGTWE-KSHEHAGHDS--SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CSSSCCC-EEEEECCCSS--CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred CCCCcce-EEEEccCCCC--ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9865322 2222222222 2234578887 67999999999999999987632 345678999999999983
Q ss_pred ---------------CEEEEEecCCcEEEEECCCC---ceeEEEecCCCCceEEEEEEcCCC----CEEEEEeCCCcEEE
Q 009274 393 ---------------GVLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSGAVSSVLSLTAVQ----HTLVVSHESGSIKV 450 (538)
Q Consensus 393 ---------------~~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i~i 450 (538)
.+|++|+.|++|++||++.. +....+..| ...+.. ++|+|++ ++|++++.|++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h-~~~V~~-v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH-SDWVRD-VAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC-SSCEEE-EECCCCSSCSCCEEEEEETTCEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC-CCceEE-EEecCCCCCCCceEEEEcCCCeEEE
Confidence 47999999999999999765 344555554 444444 6999986 89999999999999
Q ss_pred EeCCc------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 451 WRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 451 wd~~~------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
||... ....+..|...|.+++| ++++|++++.||+|++|+..
T Consensus 243 w~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99654 23456678899999987 89999999999999999976
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.5e-30 Score=255.30 Aligned_cols=271 Identities=15% Similarity=0.109 Sum_probs=220.6
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE-----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~ 286 (538)
..+..+.+.+++..++++..++.+.+|+ +.+|...|++++|+ +++|++++.||.|++||+.+++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 4477788888888888888888887776 45799999999999 8999999999999999998887655
Q ss_pred EE--ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 287 TF--KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 287 ~~--~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
.+ ..|...|.+++|+|+ +.++++++.|+.|++||+................. ......+++++++++++|+.||.|
T Consensus 89 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i 166 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR-STVLSLDWHPNSVLLAAGSCDFKC 166 (372)
T ss_dssp EEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC-SCEEEEEECTTSSEEEEEETTSCE
T ss_pred eEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC-CCeeEEEEcCCCCEEEEEcCCCCE
Confidence 44 578999999999985 46889999999999999987654322333322212 223456788899999999999999
Q ss_pred EEEEC------------------CCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCC
Q 009274 365 KAWSL------------------LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG 424 (538)
Q Consensus 365 ~iwd~------------------~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 424 (538)
++||+ .+++.+..+.+|...|.+++|+ +++|++++.|+.|++||+++++.+..+..+. .
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~ 245 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET-L 245 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS-C
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC-C
Confidence 99995 4678888898999999999998 5599999999999999999999998888663 3
Q ss_pred ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ce----------------------------------------eee-c
Q 009274 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FM----------------------------------------KSM-Q 461 (538)
Q Consensus 425 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~----------------------------------------~~~-~ 461 (538)
.+. .++|+|++.++++| .|+.|++||... .. ..+ .
T Consensus 246 ~v~-~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 1k8k_C 246 PLL-AVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS 323 (372)
T ss_dssp CEE-EEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred CeE-EEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc
Confidence 334 37999999988877 999999999544 10 223 4
Q ss_pred cccceEEEEEe---CC---CEEEEEeCCCeEEEEecCCCe
Q 009274 462 THKGSVFAVFL---EG---KWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 462 ~h~~~v~~~~~---~~---~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+|...|.++++ +| .+|++|+.||.|++||+.+.+
T Consensus 324 ~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 324 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 89999999974 56 899999999999999997643
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-30 Score=258.79 Aligned_cols=278 Identities=14% Similarity=0.193 Sum_probs=219.5
Q ss_pred EEEeecCCCcEEEEEEc--CC-EEEEEeCCCcEEEEeC----CCCc------eEEEEec----------CCcCeEEEEEe
Q 009274 245 FKDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSL----KDFS------HVHTFKG----------HDHKVMAVVYV 301 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~-~l~s~s~dg~i~iwd~----~~~~------~~~~~~~----------h~~~v~~l~~~ 301 (538)
......|.++|++++|+ ++ +|++|+.||.|++||+ .+++ ....+.. |...|.+++|+
T Consensus 38 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 38 ILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp ECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred heeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 33345677999999999 77 9999999999999999 8888 5556655 68899999999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 009274 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (538)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h 381 (538)
|+ +.++++++.||.|++||.. + .....+..+.. .....++++++++|++++.|+.|++||+.+++.+..+..+
T Consensus 118 ~~-~~~l~~~~~dg~i~i~~~~-~---~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 118 HD-GNSIVTGVENGELRLWNKT-G---ALLNVLNFHRA--PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp TT-SSEEEEEETTSCEEEEETT-S---CEEEEECCCCS--CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred CC-CCEEEEEeCCCeEEEEeCC-C---CeeeeccCCCc--cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 94 5688999999999999932 2 23333333322 2335578889999999999999999999999999998888
Q ss_pred CCC---------------eEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 382 KSA---------------VSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 382 ~~~---------------v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
... +.+++|+ ++.+++++.|+.|++||+++++.+..+..+. ..+. .++++|++++|++++.|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~i~-~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH-GPIS-VLEFNDTNKLLLSASDD 268 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCS-SCEE-EEEEETTTTEEEEEETT
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC-CceE-EEEECCCCCEEEEEcCC
Confidence 776 9999999 7799999999999999999999888887653 3444 47999999999999999
Q ss_pred CcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC
Q 009274 446 GSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG 520 (538)
Q Consensus 446 g~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 520 (538)
|.|++||.. +....+..|...|.++.+ ++ ++++++.||.|++||+.+++....... +...+..+.+ +++
T Consensus 269 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-----DGVPIFAGRISQDG 342 (425)
T ss_dssp SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-----TTCCEEEEEECTTS
T ss_pred CEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-----CCccEEEEEEcCCC
Confidence 999999955 467778889999999987 56 999999999999999998886655543 2234555555 444
Q ss_pred -EEEEEECCCeEEEEEcC
Q 009274 521 -KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 521 -~l~sg~~dg~v~vw~~~ 537 (538)
.|++++.||.|++|++.
T Consensus 343 ~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp SEEEEEETTSCEEEEECH
T ss_pred CEEEEEECCCeEEEEECC
Confidence 58889999999999974
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-29 Score=246.77 Aligned_cols=267 Identities=20% Similarity=0.346 Sum_probs=215.6
Q ss_pred ccceeeeeccC-cceeEEeecCCeEEEEEe--------------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC
Q 009274 220 ADIDQARAAGG-VKDLVNGLSKGNVKFKDL--------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF 282 (538)
Q Consensus 220 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l--------------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 282 (538)
..|.++.+.++ +..+++++.|+.+++|++ .+|.+.|++++|+ +++|++++.|+.|++|+....
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc
Confidence 45888888876 568889999999999974 5799999999999 899999999999999999999
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecC--CEEEEeeC
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLYTGSG 360 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~ 360 (538)
........+...+....+++.+ .++++++.|+.+++||....... ......+. ......++++++ .++++++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~--~~~~~~~~--~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKY--TVQDESHS--EWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEE--EECSSSCS--SCEEEEEECSCSSSCEEEEEET
T ss_pred ceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceE--EEEecccc--CcccceEEccCCCCcEEEEEcC
Confidence 9999999999999999998754 56799999999999998643211 11111111 222344666654 48899999
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 009274 361 DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
|+.|++||+++++.+..+.+|.+.|++++|+ +++|++|+.|+.|++||+++.+.+..+..+. . ...++++|++.+
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~--~-v~~~~~~~~~~~ 270 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD--I-INALCFSPNRYW 270 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS--C-EEEEEECSSSSE
T ss_pred CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc--e-EEeeecCCCCce
Confidence 9999999999999999999999999999999 5599999999999999999999988887643 2 344689998765
Q ss_pred EEEEeCCCcEEEEeCCc--cee---------eeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 439 LVVSHESGSIKVWRNDK--FMK---------SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~~--~~~---------~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+ +++.|+.|++||... ... ....|...|++++| ++++|++|+.||.|++||++++.
T Consensus 271 ~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 271 L-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp E-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred e-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 4 566799999999653 222 23468889999987 89999999999999999998764
No 67
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=275.16 Aligned_cols=228 Identities=10% Similarity=0.066 Sum_probs=172.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceE----EEEecCCcCeEEEEEecC-----CCCEEEEEcCCCcEEEEEccCCCCCc---
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHV----HTFKGHDHKVMAVVYVDE-----DQPLCISGDSGGGIFVWSFSFPLGHE--- 329 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~h~~~v~~l~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~~--- 329 (538)
++.+++++.|++|+|||+.+++.. ..+..|.+.|.+++|+|+ +..+|++++.||+|++||+..+....
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 456777889999999999877642 456778899999999996 24699999999999999998664321
Q ss_pred -----ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCCCeEEEE--Ee--C-CEEEEE
Q 009274 330 -----PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLA--VC--N-GVLYSG 398 (538)
Q Consensus 330 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~--~~--~-~~l~s~ 398 (538)
....+..+.. ....++++++ ..|++|+.||+|++||+++++ +...+.+|...|++++ |+ + .+|++|
T Consensus 253 ~~~~~p~~~l~~h~~--~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 253 KMCEKPSLTLSLADS--LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp ECCCSCSEEECCTTT--CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred eeecCceEEEEcCCC--CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 1112222221 1223455543 589999999999999999764 4566889999999994 55 3 589999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCC-ceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe--C
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSG-AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--E 473 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~ 473 (538)
+.|++|++||+++++....+..+... .+.. ++|+|+++.+++++.|++|++||.+. ....+.+|.+.|++++| +
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~-v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVP-VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCC-EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccc-eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999998877666655332 2323 68999999999999999999999654 45778899999999987 8
Q ss_pred CCEEEEEeCCCeEEEEecCC
Q 009274 474 GKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 474 ~~~l~sgs~dg~v~iwd~~~ 493 (538)
+++|++|+.||+|++||+..
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCBCEEEETTTEEECCBSCS
T ss_pred CCeEEEEECCCEEEEEechH
Confidence 99999999999999999743
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.5e-30 Score=282.41 Aligned_cols=281 Identities=17% Similarity=0.274 Sum_probs=233.5
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
...+.+|.+.|++++|+ +++|++++.||.|++||+.+++.+..+.+|...|.+++|+|+ +.++++++.||.|++||+
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEEEEET
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeEEEEEC
Confidence 45689999999999999 999999999999999999999999999999999999999995 457899999999999999
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeC---CEEEEE
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCN---GVLYSG 398 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~---~~l~s~ 398 (538)
.++.....+ ..+. ......+++|+++++++++.||.|++||+.++ .....+.+|...|.+++|++ +.++++
T Consensus 85 ~~~~~~~~~---~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 85 NTGEKVVDF---EAHP--DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TTCCEEEEE---ECCS--SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEE---ecCC--CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 876543332 2222 22345688999999999999999999999887 67778889999999999984 489999
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~-- 472 (538)
+.||.|++||+++++....+..++...+.. ++++| ++.++++++.||.|++||.. +....+.+|...|.++.+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCE-EEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEE-EEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 999999999999998888887765444444 68888 99999999999999999954 467788889999999887
Q ss_pred CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE-EeCCE--EEEEECCCeEEEEEcC
Q 009274 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL-YWQGK--LFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--l~sg~~dg~v~vw~~~ 537 (538)
++++|++++.||.|++||+.+++........ ...+..+. .+++. +++++.|+.+.+|++.
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVG-----LERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEECCS-----SSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecC-----CCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 8899999999999999999988765554432 22444554 45654 5677778889999864
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-30 Score=279.23 Aligned_cols=189 Identities=12% Similarity=0.045 Sum_probs=155.7
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe--------ecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecC
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL--------QGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGH 291 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l--------~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h 291 (538)
.+.++.+++++..++++..++.+++|+. ..|..+|++++|+ +++|++++.|++|++||+.+++.+..+. |
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~-~ 97 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF-V 97 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-C
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-C
Confidence 4788999999999999999999999963 2578899999999 8899999999999999999999998886 7
Q ss_pred CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee---------eecccCCceeeeEEEEeec-CCEEEEeeCC
Q 009274 292 DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK---------KWNEEKDWRYSGIHALTTS-GRYLYTGSGD 361 (538)
Q Consensus 292 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~l~sg~~d 361 (538)
...|.+++|+|+ +.++++|+.||+|++||+.+.... ... ....+. .....++++|+ +..+++|+.|
T Consensus 98 ~~~V~~v~~sp~-g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~--~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 98 PGKITSIDTDAS-LDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARL--SPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp SSCEEEEECCTT-CSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCC--CCCCEEEEETTEEEEEEEECSS
T ss_pred CCCEEEEEECCC-CCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCC--CCeEEEEEccCCCCEEEEEeCC
Confidence 789999999985 557899999999999999865431 110 011111 22334577774 4689999999
Q ss_pred CcEEEEECCCCceeEEecCC------------------CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCcee
Q 009274 362 RTIKAWSLLDGTLSCTMSGH------------------KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL 415 (538)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h------------------~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~ 415 (538)
|.| +||+++++++..+..| ...|++++|+ +.+|++|+.|++|++||+++++++
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 999 9999999988888765 5789999999 559999999999999999776543
No 70
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.3e-30 Score=250.63 Aligned_cols=268 Identities=16% Similarity=0.136 Sum_probs=215.0
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc---eEEEEecCCcCeEEEEEecCCCC-EEEEEcCCCcEEEEE
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHTFKGHDHKVMAVVYVDEDQP-LCISGDSGGGIFVWS 321 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~-~l~s~~~dg~i~vwd 321 (538)
..+|.+.|++++|+ +++|++++.||.|++||+.+++ ....+..|...|.+++|+|+ +. ++++|+.||.|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEEE
Confidence 46899999999999 8999999999999999998877 35556689999999999996 56 789999999999999
Q ss_pred c-cCCCCCcceeeecc--cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC---------CceeEEecCCCCCeEEEE
Q 009274 322 F-SFPLGHEPLKKWNE--EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD---------GTLSCTMSGHKSAVSTLA 389 (538)
Q Consensus 322 ~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~ 389 (538)
+ .+... ..... +. ......++++ ++.+++++.|+.|++||+++ ++++..+. |...|.+++
T Consensus 86 ~~~~~~~----~~~~~~~~~--~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 86 LIGSPSF----QALTNNEAN--LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp SSSSSSE----EECBSCCCC--SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred eccCCce----EeccccCCC--CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 9 76532 22222 22 2223456777 89999999999999999988 77777776 899999999
Q ss_pred EeCCEEEEEecCCcEEEEECCC-Cce-eEEEecCCCCceEEEEEEcC-CCCEEEEEeCCCcEEEEeC--C------ccee
Q 009274 390 VCNGVLYSGSRDGTIRLWSLSD-HSL-LTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRN--D------KFMK 458 (538)
Q Consensus 390 ~~~~~l~s~s~dg~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~--~------~~~~ 458 (538)
|+++.+++++.|+.|++||+++ +.. .......+...+. .++++| +++++++++.||.|++|+. . +...
T Consensus 158 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIR-DVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEE-EEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred ecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCcee-EEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 9977799999999999999998 654 3333333344444 479999 9999999999999999984 3 5566
Q ss_pred eeccccc---------eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEE
Q 009274 459 SMQTHKG---------SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGC 526 (538)
Q Consensus 459 ~~~~h~~---------~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~ 526 (538)
.+..|.. .|.++++ ++++|++++.||.|++||+.+++........ +...+..+. +++ .|++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----h~~~v~~~~-~~~~~l~s~s 311 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF----NEDSVVKIA-CSDNILCLAT 311 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC----SSSEEEEEE-ECSSEEEEEE
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc----cCCCceEec-CCCCeEEEEe
Confidence 7777765 8999887 8999999999999999999998865543321 144566666 655 588899
Q ss_pred CCCe
Q 009274 527 ADRT 530 (538)
Q Consensus 527 ~dg~ 530 (538)
.||.
T Consensus 312 ~Dg~ 315 (342)
T 1yfq_A 312 SDDT 315 (342)
T ss_dssp ECTH
T ss_pred cCCc
Confidence 9998
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.5e-30 Score=255.37 Aligned_cols=271 Identities=17% Similarity=0.199 Sum_probs=220.1
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------------ecCCCcEEEEEEc-C--------CEEEEEeCCCcEE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------------QGHRDCVTGLAVG-G--------GFLFSSSFDKSIH 275 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------------~~h~~~V~~l~~~-~--------~~l~s~s~dg~i~ 275 (538)
..+..+.+.+ ..++++..++.+++|++ .+|..+|++++|+ . ++|++++.||.|+
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~ 94 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLL 94 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEE
T ss_pred cCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEE
Confidence 3466777766 78888899999988874 4688999999998 4 7999999999999
Q ss_pred EEeCCCCce-----EEEEecC-----CcCeEEEEEe----cCCCCEEEEEcCCCcEEEEEccC------CCCCccee--e
Q 009274 276 VWSLKDFSH-----VHTFKGH-----DHKVMAVVYV----DEDQPLCISGDSGGGIFVWSFSF------PLGHEPLK--K 333 (538)
Q Consensus 276 iwd~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~~--~ 333 (538)
+||+.+++. ...+..| ...|.+++|+ |++...+++++.||.|++||+.+ ........ .
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcce
Confidence 999998887 8889988 5999999999 75543289999999999999987 44433000 1
Q ss_pred ecc-----cCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC---C---CCCeEEEEEe--CCEEEEEec
Q 009274 334 WNE-----EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG---H---KSAVSTLAVC--NGVLYSGSR 400 (538)
Q Consensus 334 ~~~-----~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---h---~~~v~~l~~~--~~~l~s~s~ 400 (538)
+.. ..........++++++ ++++++.||.|++||+++++.+..+.. | ...|.+++|+ +.+|++++.
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD 253 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE
T ss_pred eeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec
Confidence 111 1111233456888999 999999999999999999999999998 9 9999999998 569999999
Q ss_pred C---CcEEEEECCCCceeEEEecC------------CCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeec--
Q 009274 401 D---GTIRLWSLSDHSLLTVLEED------------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQ-- 461 (538)
Q Consensus 401 d---g~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~-- 461 (538)
| +.|++||+++++.+..+... +...+.. ++|+|++++|++++.||.|++||.. +.+..+.
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 332 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS-LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 332 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE-EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE-EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecc
Confidence 9 99999999999998888761 2444444 7999999999999999999999964 4667777
Q ss_pred ----cc---------------cceEEEEEe--CC----------CEEEEEeCCCeEEEEecCCC
Q 009274 462 ----TH---------------KGSVFAVFL--EG----------KWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 462 ----~h---------------~~~v~~~~~--~~----------~~l~sgs~dg~v~iwd~~~~ 494 (538)
.| ...|.+++| ++ ++|++++.||.|++||+.++
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 333 CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp GGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 77 899999987 66 69999999999999999775
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=2.8e-29 Score=252.48 Aligned_cols=265 Identities=17% Similarity=0.318 Sum_probs=213.3
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEE-----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHV 285 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~ 285 (538)
+...+.+..+.+ ..++.+. ++.+++|+ +.+|.+.|++++|+ |++|++|+.||+|++||+++++.+
T Consensus 105 d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 105 DYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 334455555543 3455554 67777776 34788899999999 899999999999999999999999
Q ss_pred EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEE
Q 009274 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (538)
Q Consensus 286 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 365 (538)
..+.+|...+.++.+. +.++++|+.|+.+++||...... .+..+..+.. ......++++++++++++.|+.++
T Consensus 183 ~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~--~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQ--EVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSC--EEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccce--eeEEeccccc--ceeeeeecCCCCeeeeeeccccce
Confidence 9999999999999884 46899999999999999875432 2233333332 233567888999999999999999
Q ss_pred EEECCCCc----eeEEecCCCCCeEEEEEe---CCEEEEE--ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 009274 366 AWSLLDGT----LSCTMSGHKSAVSTLAVC---NGVLYSG--SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (538)
Q Consensus 366 iwd~~~~~----~~~~~~~h~~~v~~l~~~---~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (538)
+||..+++ .+.....|...|.+++|+ .++++++ +.|++|++||+++++....+..+. .+.. +.+++++
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~--~v~~-~~~~~~~ 332 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS--QVCS-ILWSPHY 332 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS--CEEE-EEEETTT
T ss_pred EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc--ceee-eeecCCC
Confidence 99998765 355677899999999998 3466654 579999999999999988887653 2333 6889999
Q ss_pred CEEEEEe--CCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 437 HTLVVSH--ESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 437 ~~l~~~~--~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+.+++++ .|+.|++||. .+++..+.+|.+.|++++| +|++|+||+.|++|++||+.+..
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9888765 6899999995 4578889999999999987 89999999999999999997654
No 73
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=5.5e-30 Score=256.00 Aligned_cols=281 Identities=17% Similarity=0.228 Sum_probs=212.9
Q ss_pred EEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEe-------------cCCcCeEEEEEecCCCCEEE
Q 009274 246 KDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFK-------------GHDHKVMAVVYVDEDQPLCI 309 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------------~h~~~v~~l~~~~~~~~~l~ 309 (538)
..+.+|.+.|++++|+ +++|++|+.||.|++||+.+++....+. +|...|.+++|+|+++.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 4578899999999997 7999999999999999999876655443 59999999999997888899
Q ss_pred EEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee---cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeE
Q 009274 310 SGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVS 386 (538)
Q Consensus 310 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 386 (538)
+++.||.|++||+.++....... ... ......+.+ ++.++++++.|+.|++||+++++.+..+.+|...|.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN---FEE---TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE---CSS---CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred EEeCCCeEEEeeCCCCccceecc---CCC---ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 99999999999998754332222 111 122335555 445999999999999999999999999999999999
Q ss_pred EEEEe--CC-EEEEEecCCcEEEEECCCCc-eeEEEe--------------cCCCCceEEEEEEcCCCCEEEEEeCCCcE
Q 009274 387 TLAVC--NG-VLYSGSRDGTIRLWSLSDHS-LLTVLE--------------EDSSGAVSSVLSLTAVQHTLVVSHESGSI 448 (538)
Q Consensus 387 ~l~~~--~~-~l~s~s~dg~i~iwd~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 448 (538)
+++|+ +. ++++++.||.|++||++++. ....+. ..+...+. .++|+|++++|++++.||.|
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN-GLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE-EEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee-EEEEcCCCCEEEEecCCCeE
Confidence 99999 33 69999999999999998876 333331 12233444 47999999999999999999
Q ss_pred EEEeCCcce--eeeccc------cceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e
Q 009274 449 KVWRNDKFM--KSMQTH------KGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W 518 (538)
Q Consensus 449 ~iwd~~~~~--~~~~~h------~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 518 (538)
++||..... ..+..+ ......... .+..+++++.|+.|++||+.+++....... +...+..+.+ +
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~v~~~~~s~ 344 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG-----HYKTVDCCVFQS 344 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC-----CSSCEEEEEEET
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc-----CCCeEEEEEEcC
Confidence 999965422 222211 111122222 566777888899999999999887665542 2334555544 4
Q ss_pred CC-EEEEEECCCeEEEEEcCC
Q 009274 519 QG-KLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 519 ~~-~l~sg~~dg~v~vw~~~~ 538 (538)
++ .|++|+.||.|++|++.+
T Consensus 345 ~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 345 NFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTEEEEEETTSCEEEEEECC
T ss_pred CCCEEEEECCCCeEEEEeCCC
Confidence 54 588999999999999863
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=3.2e-30 Score=252.97 Aligned_cols=273 Identities=16% Similarity=0.262 Sum_probs=213.4
Q ss_pred ccceeeeeccCcceeE-Eeec---CCeEEEEEee----------cCCCcEEEEEEc-C----CEEEEEeCCCcEEEEeCC
Q 009274 220 ADIDQARAAGGVKDLV-NGLS---KGNVKFKDLQ----------GHRDCVTGLAVG-G----GFLFSSSFDKSIHVWSLK 280 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~---~~~~~i~~l~----------~h~~~V~~l~~~-~----~~l~s~s~dg~i~iwd~~ 280 (538)
..+..+.+.+++..++ ++.. ++.+.+|++. +|.++|++++|+ . ++|++|+.||.|++||+.
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 3477788888776555 4444 7888888753 688999999998 3 899999999999999999
Q ss_pred CCc-eEEEEecCCcCeEEEEEec-----CCCCEEEEEcCCCcEEEEEccCCC-CCcceeeecccCCceeeeEE---EEee
Q 009274 281 DFS-HVHTFKGHDHKVMAVVYVD-----EDQPLCISGDSGGGIFVWSFSFPL-GHEPLKKWNEEKDWRYSGIH---ALTT 350 (538)
Q Consensus 281 ~~~-~~~~~~~h~~~v~~l~~~~-----~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~ 350 (538)
+++ .+..+.+|...|.++.|.+ .++.++++++.||.|++||+.++. ....+.....+.......+. ++++
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 988 8899999999999997753 356688999999999999998765 22222222222111121111 1568
Q ss_pred cCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC-----CEEEEEecCCcEEEEECCCCceeEEEe-----c
Q 009274 351 SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN-----GVLYSGSRDGTIRLWSLSDHSLLTVLE-----E 420 (538)
Q Consensus 351 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~ 420 (538)
+++++++++.||.|++||+++++.... ..|...|.+++|++ +++++++.||.|++||+++++....+. .
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred CCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 999999999999999999999887554 56889999999984 599999999999999998876654443 3
Q ss_pred CCCCceEEEEEEcCCCC-EEEEEeCCCcEEEEeCC---------------------cceeeeccccceEEEEEe--CCCE
Q 009274 421 DSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRND---------------------KFMKSMQTHKGSVFAVFL--EGKW 476 (538)
Q Consensus 421 ~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~---------------------~~~~~~~~h~~~v~~~~~--~~~~ 476 (538)
+ ...+.. +.|+|+++ ++++++.||.|++||.. +.+..+.+|...|.+++| ++++
T Consensus 258 ~-~~~v~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 258 H-KSTVWQ-VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp C-SSCEEE-EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred C-cCCEEE-EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 3 444444 69999998 89999999999999954 346678889999999987 7888
Q ss_pred EE-EEeCCCeEEEEecCCCe
Q 009274 477 LF-TGGWDKTVSVQELAGDE 495 (538)
Q Consensus 477 l~-sgs~dg~v~iwd~~~~~ 495 (538)
|+ +++.||.|++||+.+.+
T Consensus 336 l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 336 LCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEETTSEEEEEEECC--
T ss_pred EEEEecCCCcEEEEECCCcc
Confidence 87 89999999999998754
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1e-29 Score=278.05 Aligned_cols=312 Identities=15% Similarity=0.165 Sum_probs=225.2
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe--------------------ecCCCcEEEEEEc---CCEEEEEeCCCcEEEE
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL--------------------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVW 277 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l--------------------~~h~~~V~~l~~~---~~~l~s~s~dg~i~iw 277 (538)
.+..+.+.+++..++++..++.+++|++ .+|.++|++++|+ +..+++|+.||.| +|
T Consensus 100 ~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW 178 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY 178 (902)
T ss_dssp CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE
T ss_pred CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE
Confidence 4778889999999999999999999974 4588999999999 3689999999999 99
Q ss_pred eCCCCceEEEEecC------------------CcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc---------
Q 009274 278 SLKDFSHVHTFKGH------------------DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP--------- 330 (538)
Q Consensus 278 d~~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------- 330 (538)
|+.+++.+..+..| ...|.+++|+|+ +.++++|+.||+|++||+.+++....
T Consensus 179 d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd-g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~ 257 (902)
T 2oaj_A 179 SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN-SLHIITIHEDNSLVFWDANSGHMIMARTVFETEIN 257 (902)
T ss_dssp ETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT-SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTT
T ss_pred ECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCCcEEEEEeecccccC
Confidence 99999999888766 578999999996 56889999999999999976542110
Q ss_pred ----------------eee--ecc--cCC--ce-------------eee-------------------------------
Q 009274 331 ----------------LKK--WNE--EKD--WR-------------YSG------------------------------- 344 (538)
Q Consensus 331 ----------------~~~--~~~--~~~--~~-------------~~~------------------------------- 344 (538)
+.. +.. ... .. ...
T Consensus 258 ~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (902)
T 2oaj_A 258 VPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIF 337 (902)
T ss_dssp SCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEE
T ss_pred CCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEE
Confidence 000 000 000 00 000
Q ss_pred -------EEEE--e----------ecCCEEEEeeCCCcEEEEECCCCceeEE-------ecCCCCCeEEEEE--------
Q 009274 345 -------IHAL--T----------TSGRYLYTGSGDRTIKAWSLLDGTLSCT-------MSGHKSAVSTLAV-------- 390 (538)
Q Consensus 345 -------~~~~--~----------~~~~~l~sg~~dg~i~iwd~~~~~~~~~-------~~~h~~~v~~l~~-------- 390 (538)
+..+ . .++..+++++.||.|++||+.++..... +..|...|+++++
T Consensus 338 ~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w 417 (902)
T 2oaj_A 338 PLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLW 417 (902)
T ss_dssp CCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHH
T ss_pred ecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHH
Confidence 0000 0 1223677778889999999877643322 2334455555544
Q ss_pred --------------------------e--CCEEEEEecCCcEEEEECCCCcee----EEEec------CCCCceEEEEEE
Q 009274 391 --------------------------C--NGVLYSGSRDGTIRLWSLSDHSLL----TVLEE------DSSGAVSSVLSL 432 (538)
Q Consensus 391 --------------------------~--~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~------~~~~~~~~~~~~ 432 (538)
+ +++|++|+.|++|++||+.++... ..... .+...+.+ ++|
T Consensus 418 ~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s-vaf 496 (902)
T 2oaj_A 418 LGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK-ISF 496 (902)
T ss_dssp HHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE-EEE
T ss_pred HHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE-EEe
Confidence 4 448999999999999999887531 11110 23344444 799
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCc-----------------------------------------------ceeeeccccc
Q 009274 433 TAVQHTLVVSHESGSIKVWRNDK-----------------------------------------------FMKSMQTHKG 465 (538)
Q Consensus 433 ~~~~~~l~~~~~dg~i~iwd~~~-----------------------------------------------~~~~~~~h~~ 465 (538)
+|++++|++|+.||+|++||... ++..+.+|.+
T Consensus 497 spdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~ 576 (902)
T 2oaj_A 497 AAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG 576 (902)
T ss_dssp ETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC
T ss_pred cCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC
Confidence 99999999999999999999432 2566788999
Q ss_pred eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcc-cCCCceEEEEE------eCC----EEEEEECCCeEE
Q 009274 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI-PCGSVITALLY------WQG----KLFVGCADRTVK 532 (538)
Q Consensus 466 ~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~----~l~sg~~dg~v~ 532 (538)
.|++++| +| +|++|+.|++|++||+++............. .+...+.++.| +|+ .|++|+.||+|+
T Consensus 577 ~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~ 655 (902)
T 2oaj_A 577 KTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVI 655 (902)
T ss_dssp SEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEE
T ss_pred cEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEE
Confidence 9999987 88 9999999999999999888764321111110 13444555554 453 589999999999
Q ss_pred EEEc
Q 009274 533 VYYY 536 (538)
Q Consensus 533 vw~~ 536 (538)
+|++
T Consensus 656 ~wd~ 659 (902)
T 2oaj_A 656 TYKI 659 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=3.8e-30 Score=260.81 Aligned_cols=244 Identities=14% Similarity=0.197 Sum_probs=190.9
Q ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-----------eEEEEecCC------------cCeEEEEEecCCC
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----------HVHTFKGHD------------HKVMAVVYVDEDQ 305 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~l~~~~~~~ 305 (538)
|.+.|++++|+ +++|++|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999 8999999999999999998877 578899998 8899999999764
Q ss_pred -CEEEEEcCCCcEEEEEccCCCCCcc------------------------------------eeeecccCCceeeeEEEE
Q 009274 306 -PLCISGDSGGGIFVWSFSFPLGHEP------------------------------------LKKWNEEKDWRYSGIHAL 348 (538)
Q Consensus 306 -~~l~s~~~dg~i~vwd~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~ 348 (538)
.++++++.|++|++||+.+...... ...+...+. .....+++
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~ 185 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT-YHINSISI 185 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS-SCCCEEEE
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC-cceEEEEE
Confidence 6889999999999999875321100 001111111 22335688
Q ss_pred eecCCEEEEeeCCCcEEEEECCC-CceeE-------EecCCCCCeEEEEEe--C-CEEEEEecCCcEEEEECCCCce---
Q 009274 349 TTSGRYLYTGSGDRTIKAWSLLD-GTLSC-------TMSGHKSAVSTLAVC--N-GVLYSGSRDGTIRLWSLSDHSL--- 414 (538)
Q Consensus 349 ~~~~~~l~sg~~dg~i~iwd~~~-~~~~~-------~~~~h~~~v~~l~~~--~-~~l~s~s~dg~i~iwd~~~~~~--- 414 (538)
++++++|++| .|+.|++||+++ ++... .+.+|...|++++|+ + .+|++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 8999999998 799999999984 44444 356899999999999 3 6999999999999999999886
Q ss_pred -eEEEecCCC-----------CceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cceeeeccccceE------------
Q 009274 415 -LTVLEEDSS-----------GAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSV------------ 467 (538)
Q Consensus 415 -~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~h~~~v------------ 467 (538)
...+..+.. ..+. .++|+|++++|++++. +.|++||.+ +++..+.+|...+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSIS-DVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEE-EEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eeeEeccCCCccccccccccCceEE-EEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 677766532 1344 4799999999999999 999999964 4677777776422
Q ss_pred -----EEEEeCCCEEEEEeCCCeEEEEecCCCeeEe
Q 009274 468 -----FAVFLEGKWLFTGGWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 468 -----~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~ 498 (538)
.++++++++|++|+.||.|++||+.+++...
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 2444599999999999999999999887654
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1e-29 Score=254.04 Aligned_cols=259 Identities=17% Similarity=0.291 Sum_probs=211.7
Q ss_pred cceeEEeecCCeEEEEEee----------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEE
Q 009274 231 VKDLVNGLSKGNVKFKDLQ----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAV 298 (538)
Q Consensus 231 ~~~~~~~~~~~~~~i~~l~----------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 298 (538)
+..++++..++.+.+|++. .|.+.|++++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 3557777788888888742 388999999998 8999999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe
Q 009274 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM 378 (538)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 378 (538)
+|. +.++++++.||.|++||++.... .......+.. .....+++++++++++|+.|+.|++||+++++.+..+
T Consensus 183 ~~~---~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 183 SWN---RHVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSS--EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp EEE---TTEEEEEETTSEEEEEETTSSSC--EEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred EEC---CCEEEEEcCCCCEEEEecccCcc--eeeEEcCCCC--CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 994 45899999999999999985332 2233333322 2334578889999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeC---CEEEEEe--cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe--CCCcEEEE
Q 009274 379 SGHKSAVSTLAVCN---GVLYSGS--RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH--ESGSIKVW 451 (538)
Q Consensus 379 ~~h~~~v~~l~~~~---~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~iw 451 (538)
..|...|.+++|++ .++++++ .|+.|++||+++++.+..+..+ ..+ ..++|+|+++++++++ .||.|++|
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v-~~~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQV-TSLIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCE-EEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcE-EEEEECCCCCeEEEEeecCCCcEEEE
Confidence 99999999999992 3777765 7999999999999998888643 334 4479999999999954 89999999
Q ss_pred eCCc--c--eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEee
Q 009274 452 RNDK--F--MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (538)
Q Consensus 452 d~~~--~--~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~ 499 (538)
|... . ...+.+|...|.++.+ ++++|++++.||.|++||+.+++....
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 9554 3 3346789999998887 899999999999999999998875443
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.6e-29 Score=246.58 Aligned_cols=245 Identities=18% Similarity=0.221 Sum_probs=199.9
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----ceEEEEecCCcCeEEEEEecC-CCCEEEEEcCCCcEEEE
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVW 320 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vw 320 (538)
+.+|.+.|++++|+ +++|++|+.||.|++||+.++ +....+.+|...|.+++|+|. ++.++++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 68999999999998 899999999999999999876 467778899999999999986 47789999999999999
Q ss_pred EccCCCCCc------ceeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCCceeEEec-------------
Q 009274 321 SFSFPLGHE------PLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTLSCTMS------------- 379 (538)
Q Consensus 321 d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~------------- 379 (538)
|+.++.... .......+.. .....+++++ ++++++++.||.|++||+++++.+..+.
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKG--SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred ecCCCcccccccCcceeeeecccCC--ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 998764321 2233333222 2334578888 8999999999999999999887554432
Q ss_pred CCCCCeEEEEEe-----CCEEEEEecCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCC----CEEEEEeCCCcE
Q 009274 380 GHKSAVSTLAVC-----NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQ----HTLVVSHESGSI 448 (538)
Q Consensus 380 ~h~~~v~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i 448 (538)
.|...+.+++|+ ++++++++.|+.+.+|+...++. +..+..+ ...+.. ++|+|++ ++|++|+.||.|
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~-~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH-KSLIRS-ISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC-CSCEEE-EEECCCSSCSSEEEEEEETTSCE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC-CcceeE-EEECCCCCCcceEEEEEcCCCeE
Confidence 688899999997 45999999999998888887775 4444443 444444 7999998 899999999999
Q ss_pred EEEeCC------------------------------------------------cceeeeccccceEEEEEe--CCCEEE
Q 009274 449 KVWRND------------------------------------------------KFMKSMQTHKGSVFAVFL--EGKWLF 478 (538)
Q Consensus 449 ~iwd~~------------------------------------------------~~~~~~~~h~~~v~~~~~--~~~~l~ 478 (538)
++||.. +.+..+.+|...|.+++| ++++|+
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 999954 345567789999999988 899999
Q ss_pred EEeCCCeEEEEecCCCee
Q 009274 479 TGGWDKTVSVQELAGDEF 496 (538)
Q Consensus 479 sgs~dg~v~iwd~~~~~~ 496 (538)
+++.||.|++||+.+++.
T Consensus 323 s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEETTSCEEEEEECTTSC
T ss_pred EecCCCcEEEEecCcCcc
Confidence 999999999999987654
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=9.9e-31 Score=259.02 Aligned_cols=265 Identities=12% Similarity=0.067 Sum_probs=199.3
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc---e
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---H 284 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~---~ 284 (538)
.+.++.+++++..++++..++.+++|++ .+|.+.|++++|+ +++|++++.|++|++||+.+++ .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 4667778888888888888888888764 4799999999999 8899999999999999999877 6
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcE
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i 364 (538)
...+..|...|.+++|+|++ .++++++.|+.|++||+++.............+. ......+++|++++|++|+.|+.|
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i 170 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR-STILSLDWHPNNVLLAAGCADRKA 170 (377)
T ss_dssp EEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEEECSSCC-SCEEEEEECTTSSEEEEEESSSCE
T ss_pred eeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeEeecccC-CCeEEEEEcCCCCEEEEEeCCCEE
Confidence 77788899999999999954 5678999999999999987764333444443111 223355788899999999999999
Q ss_pred EEEECC------------------CCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCce----eEEEec
Q 009274 365 KAWSLL------------------DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL----LTVLEE 420 (538)
Q Consensus 365 ~iwd~~------------------~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~ 420 (538)
++||++ .++++..+ +|...|.+++|+ +++|++++.|+.|++||+++++. +..+..
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC
Confidence 999985 34566666 899999999999 55999999999999999999887 666665
Q ss_pred CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-c---e----------------------------------eee--
Q 009274 421 DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-F---M----------------------------------KSM-- 460 (538)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~---~----------------------------------~~~-- 460 (538)
+. ..+.. ++|+|++++|++|+.++.+ +|+... . . ..+
T Consensus 250 ~~-~~v~~-~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (377)
T 3dwl_C 250 SQ-LPLRS-LLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN 326 (377)
T ss_dssp SS-SCEEE-EEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------
T ss_pred CC-CceEE-EEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc
Confidence 53 33444 7999999999988766655 665321 0 0 001
Q ss_pred --------------ccccceEEEEEe---CCC---EEEEEeCCCeEEEEec
Q 009274 461 --------------QTHKGSVFAVFL---EGK---WLFTGGWDKTVSVQEL 491 (538)
Q Consensus 461 --------------~~h~~~v~~~~~---~~~---~l~sgs~dg~v~iwd~ 491 (538)
..|...|.++.+ ++. .|+|||.||.|++||+
T Consensus 327 ~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 327 MDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 128999999975 333 7999999999999985
No 80
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.8e-29 Score=245.41 Aligned_cols=276 Identities=17% Similarity=0.266 Sum_probs=219.1
Q ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
|.++|.+++|+ |++++++..++.+..|+...........+|...|.+++|+|+ +.++++++ ||.|++||+.++...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP-TRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSS-SSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecC-CcEEEEcC-CCeEEEEECCCCCce
Confidence 45789999998 889988888888877776655555555689999999999985 45778888 999999999987665
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEe--CCEEEEEecCCcE
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTI 404 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i 404 (538)
..+...............+++++++++++++.||.|++||+++++ ....+..|...|.+++|+ ++++++++.|+.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 555544422222344466888999999999999999999999887 566778899999999999 5599999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEE
Q 009274 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTG 480 (538)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sg 480 (538)
++||+++++.+..+..+. ..+. .++++|+++++++++.||.|++||.++ ....+ .|...+.++.+ ++++++++
T Consensus 166 ~~~d~~~~~~~~~~~~~~-~~i~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHT-DGAS-CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EEEETTTTEEEEEECCCS-SCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCceeeeeeccc-CceE-EEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEE
Confidence 999999999888887653 3444 479999999999999999999999654 33333 46778888877 89999999
Q ss_pred eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
+.|+.|++||+.+.+...... +...+..+.+ +++ .+++++.||.|++|++.
T Consensus 243 ~~~~~i~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKYQLHL------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp ETTSCEEEEETTSSCEEEECC------CSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCCcEEEEECCCCCeEEEcC------CccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 999999999999887543322 2334555555 444 58889999999999985
No 81
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=7.9e-30 Score=251.14 Aligned_cols=276 Identities=9% Similarity=0.044 Sum_probs=200.9
Q ss_pred CcEEEEEEc--CCEEEEEeCCC-------cEEEEeCCCCce----------EEEEecCCcCeEEEEEecCCCCEEEEE--
Q 009274 253 DCVTGLAVG--GGFLFSSSFDK-------SIHVWSLKDFSH----------VHTFKGHDHKVMAVVYVDEDQPLCISG-- 311 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg-------~i~iwd~~~~~~----------~~~~~~h~~~v~~l~~~~~~~~~l~s~-- 311 (538)
-||+|++|+ +++|++|+.|. .|++|++..... ...+..|...|.++++.+ ..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEEC
Confidence 589999999 88888887543 599999875432 124567888999988753 344544
Q ss_pred ---------cCCCcEEEEEccCCCCCcceee-e---cccCCceeeeEEEEeecCCEEEE--eeCCCcEEEEECCCCceeE
Q 009274 312 ---------DSGGGIFVWSFSFPLGHEPLKK-W---NEEKDWRYSGIHALTTSGRYLYT--GSGDRTIKAWSLLDGTLSC 376 (538)
Q Consensus 312 ---------~~dg~i~vwd~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~iwd~~~~~~~~ 376 (538)
+.|+++++|++........... . ..........+++|+|||+++++ ++.|++|++||+++++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4578899999876543221111 1 11111123446799999998764 4578999999999999998
Q ss_pred EecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC----cEEE
Q 009274 377 TMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG----SIKV 450 (538)
Q Consensus 377 ~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg----~i~i 450 (538)
.+. |...|.+++|+ +.++++++ ++.+++|+..+++.+..............++|+|+++++++++.|+ .++.
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 886 78889999999 44777776 5567788887877665443322233344579999999999999887 5788
Q ss_pred EeCCc------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE
Q 009274 451 WRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK 521 (538)
Q Consensus 451 wd~~~------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 521 (538)
|+... ....+.+|...|++++| +|++|++|+.|++|+|||+.+++........ |...+.++.| ||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g----H~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA----HSFAITEVTISPDST 325 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS----SSSCEEEEEECTTSC
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc----ccCCEEEEEECCCCC
Confidence 88543 23456789999999887 9999999999999999999998876544321 3345555555 5665
Q ss_pred -EEEEECCCeEEEEEcC
Q 009274 522 -LFVGCADRTVKVYYYG 537 (538)
Q Consensus 522 -l~sg~~dg~v~vw~~~ 537 (538)
|++|+.|++|+||++.
T Consensus 326 ~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEEETTSEEEEEECC
T ss_pred EEEEEeCCCeEEEEEcC
Confidence 8889999999999984
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=249.39 Aligned_cols=279 Identities=13% Similarity=0.132 Sum_probs=215.5
Q ss_pred EEEEeecCCCcEEEEEEc-C----CEEEEEeCCCcEEEEeCCC-CceE-EEEecCCcCeEEEEEecCCCCEEEEEcCCCc
Q 009274 244 KFKDLQGHRDCVTGLAVG-G----GFLFSSSFDKSIHVWSLKD-FSHV-HTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~-~----~~l~s~s~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
.+..+.+|.+.|++++|+ . ++|++|+.||.|++||+.+ ++.+ ..+.+|...|.+++|+| ++.++++++.||.
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKT 109 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCc
Confidence 456789999999999999 3 7999999999999999987 5554 78889999999999999 5557899999999
Q ss_pred EEEEEccCCCCCcceeeecccCCceeeeEEEE--eecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCE
Q 009274 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL--TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGV 394 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 394 (538)
|++||+.+..... ...+.. .....++ +++++++++++.||.|++||+++++.+..+..|. .+.++.+.+..
T Consensus 110 v~iwd~~~~~~~~----~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~ 182 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ----IAQHDA--PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPM 182 (368)
T ss_dssp EEEEETTTTEEEE----EEECSS--CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETTE
T ss_pred EEEEEcCCCCcee----eccccC--ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCCe
Confidence 9999998654322 122222 2223455 6788899999999999999999999999888654 67888888889
Q ss_pred EEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE----EEEEeCCCcEEEEeCCc-----ceeeeccccc
Q 009274 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT----LVVSHESGSIKVWRNDK-----FMKSMQTHKG 465 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~dg~i~iwd~~~-----~~~~~~~h~~ 465 (538)
+++++.++.+++||++..................++.+.++... +++++.||.|++||... ....+..|..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 99999999999999988765444333222333344555554443 99999999999999653 4567777776
Q ss_pred ------------eEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEECCC
Q 009274 466 ------------SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCADR 529 (538)
Q Consensus 466 ------------~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~dg 529 (538)
.|.++++ ++++|++++.||.|++||+.+++....... +...+..+.+ +++. |++|+.|+
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-----LDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-----CSSCEEEEEECTTSSCEEEEECCC
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-----CCCCceEEEECCCCCeEEEEeccc
Confidence 6998887 889999999999999999999877654432 3335555555 4554 88899888
Q ss_pred eEEEEE
Q 009274 530 TVKVYY 535 (538)
Q Consensus 530 ~v~vw~ 535 (538)
..+.|+
T Consensus 338 ~~~~~~ 343 (368)
T 3mmy_A 338 WSKGHE 343 (368)
T ss_dssp STTCGG
T ss_pred cccccc
Confidence 655544
No 83
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3e-29 Score=250.64 Aligned_cols=306 Identities=18% Similarity=0.175 Sum_probs=215.3
Q ss_pred Cccceeeeecc-CcceeEEeecCCeEEEEEee----------------------cCCCcEEEEEEc---CCEEEEEeCCC
Q 009274 219 GADIDQARAAG-GVKDLVNGLSKGNVKFKDLQ----------------------GHRDCVTGLAVG---GGFLFSSSFDK 272 (538)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~----------------------~h~~~V~~l~~~---~~~l~s~s~dg 272 (538)
...+.++.+.+ ++..++++..++.+.+|++. +|...|++++|+ +++|++++.||
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 34578888988 88999999999999999964 499999999998 57999999999
Q ss_pred cEEEEeCCCCceEEEEecCCcCeEEEEEecCC--CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee
Q 009274 273 SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDED--QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT 350 (538)
Q Consensus 273 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (538)
.|++||+.+++....+. +...+.++.|++.+ ..++++++.||.|++||+.++.....+. .+.. .....+++|
T Consensus 123 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~--~v~~~~~~~ 196 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ---GHRQ--EILAVSWSP 196 (408)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC---CCCS--CEEEEEECS
T ss_pred eEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec---CCCC--cEEEEEECC
Confidence 99999999999888877 78889999999854 3489999999999999998765443332 2222 233557888
Q ss_pred cCC-EEEEeeCCCcEEEEECCCCc-eeEEe---------------cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCC
Q 009274 351 SGR-YLYTGSGDRTIKAWSLLDGT-LSCTM---------------SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 351 ~~~-~l~sg~~dg~i~iwd~~~~~-~~~~~---------------~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~ 411 (538)
+++ .+++|+.||.|++||++++. .+..+ ..|...|.+++|+ +++|++++.|+.|++||+++
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 888 69999999999999998765 33333 5788999999999 55999999999999999999
Q ss_pred CceeEEEecCC----CCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCC
Q 009274 412 HSLLTVLEEDS----SGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWD 483 (538)
Q Consensus 412 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~d 483 (538)
++......... ...... ......+..+++++.|+.|++||. .+.+..+.+|...|.++++ ++++|++++.|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKF-TVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCC-EECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred Cccceecccccccccccccee-EEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 87654443211 111111 223344556777788999999995 4578888999999999887 89999999999
Q ss_pred CeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEEEEcC
Q 009274 484 KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 484 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~vw~~~ 537 (538)
|.|++||+.+.+......... ........ ...+.+++.|+.+++|+..
T Consensus 356 g~i~iw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 356 CNILAWVPSLYEPVPDDDETT------TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp SCEEEEEECC---------------------------------------------
T ss_pred CeEEEEeCCCCCccCCCCceE------eccccccccceeecccCccCceeecCCc
Confidence 999999999887543322111 11111111 3345668889999999863
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=8.6e-29 Score=238.70 Aligned_cols=269 Identities=17% Similarity=0.206 Sum_probs=202.5
Q ss_pred EEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 255 VTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 255 V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
.++|+|+ +++|++| .|++|+|||+++++.+..++ +|...|.+++|+|+ +.++++|+.||+|++||+++++..
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~--- 102 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRL--- 102 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEE---
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC-CCEEEEEECCCcEEEeecCCceeE---
Confidence 4679999 7777665 59999999999999988776 57788999999985 458899999999999999876533
Q ss_pred eeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEE
Q 009274 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd 408 (538)
.....+. ..+.++++++..+++|+.++.+++|+.... ..+..+.+|...+.++.+. +.++++++.|++|++||
T Consensus 103 ~~~~~h~----~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 103 RNMTSHS----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEECCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEecCcc----ceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 3333332 235678889999999999999999998875 4567788999999999998 66999999999999999
Q ss_pred CCCCceeE---EEecCCCCceEEEEEEcCCCC-EE--EEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe--CCCEEEE
Q 009274 409 LSDHSLLT---VLEEDSSGAVSSVLSLTAVQH-TL--VVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFT 479 (538)
Q Consensus 409 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~l--~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l~s 479 (538)
+++++... .....+.+.+.. +.+++++. .+ ++++.++.|++||... .......+...+..+.+ +++.+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKA-VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEE-EEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred CCCCcccccceeeecccCCceEE-EEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEE
Confidence 99876321 122222344444 56776654 33 4566789999999654 23333445666666655 7777766
Q ss_pred Ee--CCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcCC
Q 009274 480 GG--WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 480 gs--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~~ 538 (538)
++ .|+.|++||+.+++....+.. |...+.++.+ +++ .|++|+.||+|+|||+.+
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~g-----H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKG-----HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 54 799999999999887665542 3445666655 455 588999999999999853
No 85
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-30 Score=260.22 Aligned_cols=276 Identities=16% Similarity=0.199 Sum_probs=216.2
Q ss_pred CcEEEEEEc--CC-EEEEE----------eCCCcEEEEeCCCCc---eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc
Q 009274 253 DCVTGLAVG--GG-FLFSS----------SFDKSIHVWSLKDFS---HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 253 ~~V~~l~~~--~~-~l~s~----------s~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
..|.+++|+ ++ ++++| +.|+.|++||+.+++ .+..+ .|...|.+++|+|++ .++++++.||.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~dg~ 90 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNN-KIIAGALDNGS 90 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSS-SCEEEEESSSC
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCC-CeEEEEccCCe
Confidence 468889998 54 89999 899999999998875 33333 588999999999855 46799999999
Q ss_pred EEEEEccCCCCCc-ceeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCc------eeEE---ecCCCCCe
Q 009274 317 IFVWSFSFPLGHE-PLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGT------LSCT---MSGHKSAV 385 (538)
Q Consensus 317 i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~------~~~~---~~~h~~~v 385 (538)
|++||+.+..... .......+.. ....++++++ ++++++++.||.|++||+++++ .... +..|...|
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred EEEeecccccccccchhhccCCcc--ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence 9999998733222 3333333332 2335678887 7899999999999999999876 3333 36799999
Q ss_pred EEEEEe-C--CEEEEEecCCcEEEEECCCCceeEEEecCC-----CCceEEEEEEcCCC-CEEEEEeCCC---cEEEEeC
Q 009274 386 STLAVC-N--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDS-----SGAVSSVLSLTAVQ-HTLVVSHESG---SIKVWRN 453 (538)
Q Consensus 386 ~~l~~~-~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~l~~~~~dg---~i~iwd~ 453 (538)
.+++|+ + .++++++.|+.|++||+++++.+..+..+. ...+ ..++|+|++ .++++++.|+ .|++||.
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL-SVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE-EEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce-EEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 999999 3 489999999999999999999888887653 3334 447999997 6899999998 9999996
Q ss_pred C---cceeeec-cccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEE
Q 009274 454 D---KFMKSMQ-THKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFV 524 (538)
Q Consensus 454 ~---~~~~~~~-~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~s 524 (538)
+ .....+. +|...|.+++| ++++|++++.||.|++||+.+++........ ...+....+.+++ .+++
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR----GNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS----SSCCCCEEECTTCTTEEEE
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC----CCceEEEEECCCCCCEEEE
Confidence 5 3566777 89999999987 7889999999999999999988766554432 2223334444554 6888
Q ss_pred EECCCeEEEEEcC
Q 009274 525 GCADRTVKVYYYG 537 (538)
Q Consensus 525 g~~dg~v~vw~~~ 537 (538)
++.||.|++|++.
T Consensus 324 ~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 324 ASFDNKIEVQTLQ 336 (416)
T ss_dssp CCSSSEEEEEESC
T ss_pred EecCCcEEEEEcc
Confidence 9999999999985
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=8.2e-29 Score=249.06 Aligned_cols=267 Identities=18% Similarity=0.266 Sum_probs=204.6
Q ss_pred cEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 254 CVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 254 ~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..+.|+|+ ++.|++|. |++|+|||+.+++....+. +|...|++++|+|+ +.++++|+.||+|++||+.+++.
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd-g~~lasgs~Dg~v~iWd~~~~~~--- 181 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKR--- 181 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEE---
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC-CCEEEEEECCCeEEEEEcCCCcE---
Confidence 35779999 77777765 9999999999999888775 57788999999995 55889999999999999987643
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEE
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLW 407 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iw 407 (538)
+.....+. ..+.++++++..+++|+.|+.+++||.... ..+..+.+|...+..+.++ +.++++++.|+.+++|
T Consensus 182 ~~~~~~h~----~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 182 LRNMTSHS----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEECCCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEeCCC----CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 33333332 246688899999999999999999998864 4567789999999999999 6699999999999999
Q ss_pred ECCCCce----eEEEecCCCCceEEEEEEcCCC-CEEEEE--eCCCcEEEEeCCc--ceeeeccccceEEEEEe--CCCE
Q 009274 408 SLSDHSL----LTVLEEDSSGAVSSVLSLTAVQ-HTLVVS--HESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKW 476 (538)
Q Consensus 408 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~l~~~--~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~ 476 (538)
|..+++. +.....+ ...+.. ++|+|++ ..++++ +.|++|++||..+ ....+..|. .+.++.+ +++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~-~~~V~~-~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~ 334 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQH-QGAVKA-VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKE 334 (420)
T ss_dssp ESSCCSSCSCCSEEECCC-SSCEEE-EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTE
T ss_pred eeccccccceeeeeeccc-CCceee-eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCe
Confidence 9988753 3333333 444444 5788765 555554 4799999999654 555555554 4555554 7888
Q ss_pred EEEEe--CCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 477 LFTGG--WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 477 l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
+++++ .|+.|++||+.+++....+.. |...+.++.+ +++ .|++|+.||+|++||+.
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~g-----H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKG-----HTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 77765 789999999999887665432 3345555555 455 58999999999999974
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=4.4e-29 Score=263.51 Aligned_cols=283 Identities=17% Similarity=0.227 Sum_probs=227.6
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----ceEEEEecCCcC-eEEEEEecC-CCCEEEEEcCCCcEEEE
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFKGHDHK-VMAVVYVDE-DQPLCISGDSGGGIFVW 320 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~-v~~l~~~~~-~~~~l~s~~~dg~i~vw 320 (538)
..|.+.|++++|+ +++|++++ |+.|++||+.++ +....+.+|... |.+++|+|. ++.++++++.||.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 4689999999999 88999998 889999999999 899999999999 999999982 34588999999999999
Q ss_pred EccCCCC-----CcceeeecccCCceeeeEEEEeecCCEEEEeeCC----CcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 009274 321 SFSFPLG-----HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD----RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 321 d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (538)
|+.++.. ......+..+. ......+++++++++++++.+ +.|++|| +++.+..+.+|...|.+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLA--GPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCS--SCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEEC
T ss_pred eCCCCcccccccccccchhhccc--ccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEEC
Confidence 9974411 11222222222 223456889999999999988 6888888 677888999999999999999
Q ss_pred --CC-EEEEEecCCcEEEEECCCCceeEEEecCCCC--ceEEEEEEcCC-CCEEEEEeCCCcEEEEeCC--cceeee-c-
Q 009274 392 --NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG--AVSSVLSLTAV-QHTLVVSHESGSIKVWRND--KFMKSM-Q- 461 (538)
Q Consensus 392 --~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~--~~~~~~-~- 461 (538)
+. .+++++.|+.|++||+.+++.+..+..+... .+. .++|+|+ ++++++++.||.|++||.. +.+..+ .
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 248 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR-DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD 248 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEE-EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEE-EEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc
Confidence 33 8999999999999999999998888765431 344 4799999 9999999999999999954 466667 5
Q ss_pred --cccceEEEEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 462 --THKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 462 --~h~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.|...|.++.+ ++++|++++.||.|++||+.+++..................+.+..+..+++++.||.|++|++.
T Consensus 249 ~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 249 QEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp TBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred ccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 89999999998 89999999999999999999888766555432111122333333357779999999999999975
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=4.9e-29 Score=284.61 Aligned_cols=313 Identities=19% Similarity=0.249 Sum_probs=246.0
Q ss_pred CCccceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCce
Q 009274 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSH 284 (538)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~ 284 (538)
....+..+.+++++..++++..++.+.+|+ +.+|...|++++|+ +.++++|+.|+.|++||+.+++.
T Consensus 656 h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 345678889999999999999999999997 46899999999997 45899999999999999999999
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceee-------------------------------
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK------------------------------- 333 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------------------------------- 333 (538)
+..+.+|.+.|.+++|+|+ +.++++++.||.|++||+.++.....+..
T Consensus 736 ~~~~~~h~~~v~~~~~sp~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 814 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFSPD-DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII 814 (1249)
T ss_dssp EEEECCCSSCEEEEEECSS-TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred hheecCCCCCEEEEEEecC-CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence 9999999999999999995 45889999999999999876532211110
Q ss_pred ---------eccc----------CCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 009274 334 ---------WNEE----------KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 334 ---------~~~~----------~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (538)
+... .........+++++++++++++.||.|++||+.++..+..+.+|...|.+++|+ +
T Consensus 815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC
Confidence 0000 001122345788999999999999999999999999999999999999999999 5
Q ss_pred CEEEEEecCCcEEEEECCC-------------------------------------------------------------
Q 009274 393 GVLYSGSRDGTIRLWSLSD------------------------------------------------------------- 411 (538)
Q Consensus 393 ~~l~s~s~dg~i~iwd~~~------------------------------------------------------------- 411 (538)
.++++++.|+.|++||+.+
T Consensus 895 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~ 974 (1249)
T 3sfz_A 895 SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE 974 (1249)
T ss_dssp SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS
T ss_pred CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC
Confidence 5899999999999998542
Q ss_pred ------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeeccccceEEEEEe
Q 009274 412 ------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL 472 (538)
Q Consensus 412 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~h~~~v~~~~~ 472 (538)
++....+..+ ...+.. ++|+|+++++++++.||.|++||..+ ....+..|...+.++.+
T Consensus 975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h-~~~v~~-l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 975 YVAFGDEDGAIKIIELPNNRVFSSGVGH-KKAVRH-IQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL 1052 (1249)
T ss_dssp EEEEEETTSCCEEEETTTTSCEEECCCC-SSCCCC-EEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCceeeecccC-CCceEE-EEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEE
Confidence 1111222222 222333 68999999999999999999999654 33456689999999988
Q ss_pred -CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEcC
Q 009274 473 -EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 -~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
.+..+++++.||.|++||+.+++........ ...+....+.+++ .+++++.||.|++|++.
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~----~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~ 1115 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTCH----QGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEECC----SSCCCCEEECSSSSSCEEECCSSCCCEECSS
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEccc----CCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 6678999999999999999988765554322 2223334444555 48899999999999975
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-28 Score=235.29 Aligned_cols=262 Identities=20% Similarity=0.289 Sum_probs=214.4
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe---------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC---ceE
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHV 285 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~---~~~ 285 (538)
..+..+.+ +++..++++..++.+++|++ ..|...|++++|+ ++++++++.||.|++|++.+. +.+
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc
Confidence 34777777 77888999999999999984 4689999999999 899999999999999998654 667
Q ss_pred EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcE
Q 009274 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTI 364 (538)
Q Consensus 286 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i 364 (538)
..+.+|...|.++.| ++.++++++.||.|++||. .........+.. ... ...+.+ +++.+++++.||.|
T Consensus 98 ~~~~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~-~v~-~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 98 YTLIGHQGNVCSLSF---QDGVVISGSWDKTAKVWKE-----GSLVYNLQAHNA-SVW-DAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp CEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEET-----TEEEEEEECCSS-CEE-EEEEEETTTTEEEEEETTSCE
T ss_pred cchhhcccCEEEEEe---cCCEEEEEeCCCCEEEEcC-----CcEEEecccCCC-cee-EEEEccCCCCEEEEEECCCCE
Confidence 888999999999999 3458899999999999992 122333333322 222 234445 88999999999999
Q ss_pred EEEECCCCceeEEecC-CCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 365 KAWSLLDGTLSCTMSG-HKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~~-h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
++|| ..+....+.. |...+.+++|+ ++.+++++.|+.|++||+++++.+..+..+. ..+.. ++++|++ .++++
T Consensus 168 ~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~-~~~~~~~-~l~~~ 242 (313)
T 3odt_A 168 KLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYC-IKLLPNG-DIVSC 242 (313)
T ss_dssp EEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEE-EEECTTS-CEEEE
T ss_pred EEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCC-ceEEE-EEEecCC-CEEEE
Confidence 9999 5567777776 99999999999 6679999999999999999999999888654 44444 7999999 58899
Q ss_pred eCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEe
Q 009274 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~ 498 (538)
+.||.|++||.. +....+..|...|.++.+ +++ +++++.||.|++||+.+++...
T Consensus 243 ~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 243 GEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp ETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred ecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 999999999954 567888899999999988 666 7789999999999999876543
No 90
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-29 Score=247.89 Aligned_cols=245 Identities=17% Similarity=0.242 Sum_probs=186.0
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC--CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
+..+.+|.++|++++|+ +++|++|+.||.|++||+. +++.+..+.+|...|.+++|+++.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------------- 67 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK---------------- 67 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG----------------
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC----------------
Confidence 45688999999999999 8999999999999999997 667788899999999999997632
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEe----CCE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVC----NGV 394 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~----~~~ 394 (538)
++++|++|+.||.|++||+.+++ .+..+..|...|.+++|+ +.+
T Consensus 68 ------------------------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 117 (379)
T 3jrp_A 68 ------------------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL 117 (379)
T ss_dssp ------------------------------GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE
T ss_pred ------------------------------CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE
Confidence 13345555555555555555554 566677899999999998 348
Q ss_pred EEEEecCCcEEEEECCCCcee--EEEecCCCCceEEEEEEcC-------------CCCEEEEEeCCCcEEEEeCCc----
Q 009274 395 LYSGSRDGTIRLWSLSDHSLL--TVLEEDSSGAVSSVLSLTA-------------VQHTLVVSHESGSIKVWRNDK---- 455 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~~~dg~i~iwd~~~---- 455 (538)
+++++.|+.|++||++++... ..+..+ ...+.. +.|+| ++.++++++.||.|++||.+.
T Consensus 118 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 118 LLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp EEEEETTSEEEEEECCTTSCCCEEEEECC-TTCEEE-EEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred EEEecCCCcEEEEecCCCCceeeEEecCC-CCceEE-EEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 999999999999999987433 333333 344444 68998 699999999999999999542
Q ss_pred --ceeeeccccceEEEEEe--C---CCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEE
Q 009274 456 --FMKSMQTHKGSVFAVFL--E---GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGC 526 (538)
Q Consensus 456 --~~~~~~~h~~~v~~~~~--~---~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~ 526 (538)
....+.+|...|.+++| + +++|++++.||.|++||+.++.............+...+..+.+ +++ .|++++
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 44677889999999987 5 88999999999999999987642111111111113344555555 455 488899
Q ss_pred CCCeEEEEEcC
Q 009274 527 ADRTVKVYYYG 537 (538)
Q Consensus 527 ~dg~v~vw~~~ 537 (538)
.||.|++|++.
T Consensus 276 ~dg~i~iw~~~ 286 (379)
T 3jrp_A 276 GDNKVTLWKEN 286 (379)
T ss_dssp SSSSEEEEEEE
T ss_pred CCCcEEEEeCC
Confidence 99999999974
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.5e-28 Score=266.62 Aligned_cols=267 Identities=19% Similarity=0.297 Sum_probs=220.7
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEE---------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 289 (538)
.+..+.+++++..++++..++.+.+|+ +.+|.++|++++|+ +++|++|+.||.|++||+.+++.+..+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 477888889999999999999999887 45799999999999 8999999999999999999999999999
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEE
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd 368 (538)
+|.+.|.+++|+|++ .++++++.||.|++||+.++.. .......+. ......+++| +++.+++++.||.|++||
T Consensus 95 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA--LEQTFEGHE--HFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp CCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSE--EEEEEECCS--SCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred cCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCce--EEEEEcCCC--CcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 999999999999955 4778999999999999986522 222222222 2233557788 788999999999999999
Q ss_pred CCCCceeEEecCCC-CCeEEEEEe----CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe
Q 009274 369 LLDGTLSCTMSGHK-SAVSTLAVC----NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 369 ~~~~~~~~~~~~h~-~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
+.+++....+..+. ..+.+++|+ +.++++++.||.|++||+++++.+..+..+. ..+. .++|+|+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~v~-~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVS-FAVFHPTLPIIISGS 247 (814)
T ss_dssp TTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS-SCEE-EEEECSSSSEEEEEE
T ss_pred CCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC-CCEE-EEEEcCCCCEEEEEe
Confidence 99988887776655 889999997 3499999999999999999999988887653 3444 379999999999999
Q ss_pred CCCcEEEEeCC--cceeeeccccceEEEEEe--CCC-EEEEEeCCCeEEEEecCCC
Q 009274 444 ESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 444 ~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~-~l~sgs~dg~v~iwd~~~~ 494 (538)
.||.|++||.. +....+..|...+.++++ ++. .+++++.|+.+.+|++...
T Consensus 248 ~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 248 EDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp TTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred CCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 99999999954 567788889999999987 554 2344445777888987643
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-29 Score=252.29 Aligned_cols=267 Identities=14% Similarity=0.191 Sum_probs=210.0
Q ss_pred Cccceeeeecc-CcceeEEeecCCeEEEEEee--------------cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC-
Q 009274 219 GADIDQARAAG-GVKDLVNGLSKGNVKFKDLQ--------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK- 280 (538)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~--------------~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~- 280 (538)
...+.++.+.+ ++..++++..++.+++|++. +|.++|++++|+ +++|++|+.||+|++||++
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 34688899999 88999999999999999853 589999999998 8999999999999999994
Q ss_pred --CCceEEEEec------------CCcCeEEEEEec-CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeE
Q 009274 281 --DFSHVHTFKG------------HDHKVMAVVYVD-EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI 345 (538)
Q Consensus 281 --~~~~~~~~~~------------h~~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (538)
+++....+.. +...+.++.+.. .++.++++++.||.|++||+++......+. ..........
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~h~~~v~~ 219 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE---NSPRHGAVSS 219 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE---CCGGGCCEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc---cCCCCCceEE
Confidence 5655554443 445566666431 356688999999999999998765433332 2111123345
Q ss_pred EEEeecCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEeC------CEEEEEecCCcEEEEECCCCceeEEE
Q 009274 346 HALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVCN------GVLYSGSRDGTIRLWSLSDHSLLTVL 418 (538)
Q Consensus 346 ~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~------~~l~s~s~dg~i~iwd~~~~~~~~~~ 418 (538)
+++++++++|++|+.||.|++||+++++++..+. .|...|.+++|++ .++++|+.|+.|++||+++++.+..+
T Consensus 220 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 220 ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 6788899999999999999999999999999886 7888999997762 28999999999999999999988888
Q ss_pred ecCC-------------------------CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--ceeeecc---------
Q 009274 419 EEDS-------------------------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT--------- 462 (538)
Q Consensus 419 ~~~~-------------------------~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~--------- 462 (538)
..+. ...+.. ++++ ++++|++|+.||.|++||..+ ....+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~-l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 377 (437)
T 3gre_A 300 INSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST-ISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFI 377 (437)
T ss_dssp ESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC-EEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEE
T ss_pred EcCCCCCccceecccccccccceecccccCCceEE-EEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEE
Confidence 7542 222333 5777 778999999999999999653 3333433
Q ss_pred ----------------------------ccceEEEEEe--C--CCEEEEEeCCCeEEEEe
Q 009274 463 ----------------------------HKGSVFAVFL--E--GKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 463 ----------------------------h~~~v~~~~~--~--~~~l~sgs~dg~v~iwd 490 (538)
|...|.++.+ + +.+|++|+.||.|++|+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 378 PTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8889999887 4 66999999999999995
No 93
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9.7e-29 Score=245.30 Aligned_cols=262 Identities=16% Similarity=0.188 Sum_probs=206.6
Q ss_pred ccceeeeeccCc-ceeEEeecCCeEEEEEee-----------cCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCce
Q 009274 220 ADIDQARAAGGV-KDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH 284 (538)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~-----------~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~ 284 (538)
..+.++.+.+++ ..++++..++.+++|++. +|.+.|++++|+ +++|++++.|+.|++||+.+ +.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cc
Confidence 347788888887 899999999999999853 699999999998 48999999999999999986 56
Q ss_pred EEEEecCC---cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeC
Q 009274 285 VHTFKGHD---HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSG 360 (538)
Q Consensus 285 ~~~~~~h~---~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~ 360 (538)
+..+..|. ..|.+++|+|+ +.++++++.|+.|++||++ + ..+..+..+.. ....++++++++ ++++|+.
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~-~---~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLLGLD-G---HEIFKEKLHKA--KVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEEETT-S---CEEEEEECSSS--CEEEEEECSSCTTEEEEEET
T ss_pred eEEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEEECC-C---CEEEEeccCCC--cEEEEEECCCCCCEEEEEeC
Confidence 66665544 88999999995 4588999999999999984 2 23333333332 233567888888 9999999
Q ss_pred CCcEEEEECCC----CceeEEecCCCCCeEEEEEeC---CEEEEEecCCcEEEEECCCCceeEEEecCCC------C---
Q 009274 361 DRTIKAWSLLD----GTLSCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS------G--- 424 (538)
Q Consensus 361 dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~------~--- 424 (538)
|+.|++||+++ +..+..+ +|...|.+++|++ .+|++++.|+.|++||+++++....+..+.. .
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE
Confidence 99999999987 5566666 6999999999985 5999999999999999999887766654321 1
Q ss_pred ------ceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccceeeecc--ccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 425 ------AVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQT--HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 425 ------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~--h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
.....+.++|++++ +++.||.|++||. ++.+..+.+ |...+.+++| ++++|++|+ ||.|++||++
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 11122466676666 7779999999995 456777776 4566666565 899999997 9999999987
Q ss_pred C
Q 009274 493 G 493 (538)
Q Consensus 493 ~ 493 (538)
+
T Consensus 382 ~ 382 (383)
T 3ei3_B 382 D 382 (383)
T ss_dssp -
T ss_pred C
Confidence 5
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=9.3e-28 Score=231.42 Aligned_cols=260 Identities=17% Similarity=0.296 Sum_probs=204.1
Q ss_pred eeeeeccCcceeEEeecCCeEEEEE-----------eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 009274 223 DQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (538)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 289 (538)
+.+..++++ .++++ .++.+++|+ +.+|...|++++|+ ++++++|+.||+|++||+++++.+..+.
T Consensus 29 ~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 334444433 34443 366677775 34688899999999 8999999999999999999999999999
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEEC
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~ 369 (538)
+|...+.++.+. +.++++++.++.+++|+...... .......+. .......+.++++++++++.|+.|++||+
T Consensus 107 ~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 107 SHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEH--HVATLSGHS--QEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSC--EEEEEECCS--SCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred CccceEEEeecC---CCEEEEEecCCceEeeecCCCce--eEEEEcCcc--CceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 999999887764 45889999999999999875432 222222222 22335577888999999999999999999
Q ss_pred CCCce----eEEecCCCCCeEEEEEe---CCE--EEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 009274 370 LDGTL----SCTMSGHKSAVSTLAVC---NGV--LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (538)
Q Consensus 370 ~~~~~----~~~~~~h~~~v~~l~~~---~~~--l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 440 (538)
++++. ......|.+.|.++++. +.. +++++.+++|++||.+............ .+. .+.++++++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~--~v~-~~~~~~~~~~~~ 256 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS--QVC-SILWSPHYKELI 256 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS--CEE-EEEEETTTTEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee--eee-eeeecccccceE
Confidence 88653 34556788899999998 233 3566789999999999988776665432 233 368889988887
Q ss_pred EEe--CCCcEEEEeC--CcceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 441 VSH--ESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 441 ~~~--~dg~i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+++ .|+.|++||. .+++..+.+|.+.|++++| ++++|+||+.||+|++||+.+.
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 765 7999999995 4678899999999999987 8999999999999999998754
No 95
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=2e-28 Score=234.14 Aligned_cols=231 Identities=20% Similarity=0.280 Sum_probs=184.8
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCc-
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFS- 283 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~- 283 (538)
..+..+.+++++..++++..++.+++|++ .+|.++|++++|+ +++|+||+.|++|++||+.+++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 45778889999999999999999999974 5799999999996 6899999999999999998874
Q ss_pred -eEEEEecCCcCeEEEEEecCC-CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec----------
Q 009274 284 -HVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---------- 351 (538)
Q Consensus 284 -~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 351 (538)
.+..+.+|...|.+++|+|+. +.++++++.|++|++||+++...... .....+.. .....+++|+
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~-~~~~~h~~--~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP-IIIDAHAI--GVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC-EEEECCSS--CEEEEEECCCC---------
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee-eeeecccC--ccceEeecCCcccccccCCC
Confidence 567788999999999999863 67899999999999999986532211 22222221 1223456665
Q ss_pred ---CCEEEEeeCCCcEEEEECCCCc----eeEEecCCCCCeEEEEEeC-----CEEEEEecCCcEEEEECCCCce--e-E
Q 009274 352 ---GRYLYTGSGDRTIKAWSLLDGT----LSCTMSGHKSAVSTLAVCN-----GVLYSGSRDGTIRLWSLSDHSL--L-T 416 (538)
Q Consensus 352 ---~~~l~sg~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~iwd~~~~~~--~-~ 416 (538)
+++|++|+.|++|++||+++++ ....+.+|...|.+++|++ .+|++++.|++|++||+++... . .
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~ 246 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKT 246 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcccee
Confidence 4699999999999999998776 5678899999999999993 4899999999999999987531 2 2
Q ss_pred EEe-cCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 417 VLE-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 417 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
.+. ..+...+. .++|+|++++|++++.||.|++|+..
T Consensus 247 ~~~~~~~~~~v~-~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 247 LLKEEKFPDVLW-RASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ESSSSCCSSCEE-EEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred eeecccCCCcEE-EEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 221 12234444 47999999999999999999999854
No 96
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=260.12 Aligned_cols=256 Identities=11% Similarity=0.064 Sum_probs=193.0
Q ss_pred ceeEEeecCCeEEEEEe-------------ecCCCcEEEEEEc-C-------CEEEEEeCCCcEEEEeCCCCce------
Q 009274 232 KDLVNGLSKGNVKFKDL-------------QGHRDCVTGLAVG-G-------GFLFSSSFDKSIHVWSLKDFSH------ 284 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~l-------------~~h~~~V~~l~~~-~-------~~l~s~s~dg~i~iwd~~~~~~------ 284 (538)
..++++..++.+++|++ .+|.+.|++++|+ . ++||+++.||+|++||+.+++.
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 34566777888888875 3567889999998 2 5999999999999999986642
Q ss_pred -----EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeE-EEEeecC-CEEEE
Q 009274 285 -----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI-HALTTSG-RYLYT 357 (538)
Q Consensus 285 -----~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~l~s 357 (538)
...+.+|...|.+++|+++ ..|++|+.||+|++||++++.. ....+..+.. ....+ .++++++ ++|++
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~-~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEV--PSFYDQVHDS-YILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSS--CSEEEECSSS-CEEEEEEECCTTSCCEEEE
T ss_pred eecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCC--ceEEeecccc-cEEEEEEEcCCCCCeEEEE
Confidence 3478899999999999874 3789999999999999986532 2222333333 23333 2456777 79999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEc
Q 009274 358 GSGDRTIKAWSLLDGTLSCTMSGHKS--AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT 433 (538)
Q Consensus 358 g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (538)
|+.|++|++||+++++++..+.+|.. .|.+++|+ +..+++++.|++|++||++++.++..+..| .+.+.. ++|+
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-~~~V~s-va~S 406 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-ETTITA-IGVS 406 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-SSCEEE-EECC
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-CCceEE-EEeC
Confidence 99999999999999888777777653 58899999 348999999999999999999988888775 445555 6999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCc----------------------------------------------ceeeeccccceE
Q 009274 434 AVQHTLVVSHESGSIKVWRNDK----------------------------------------------FMKSMQTHKGSV 467 (538)
Q Consensus 434 ~~~~~l~~~~~dg~i~iwd~~~----------------------------------------------~~~~~~~h~~~v 467 (538)
|++++|++|+.||+|++||... ....+.+|...|
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V 486 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINI 486 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSC
T ss_pred CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceE
Confidence 9999999999999999997311 011233466778
Q ss_pred EEEEe--C---CCEEEEEeCCCeEEEEecCCC
Q 009274 468 FAVFL--E---GKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 468 ~~~~~--~---~~~l~sgs~dg~v~iwd~~~~ 494 (538)
.+++| + +.++++|+.||.|+||++...
T Consensus 487 ~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 487 TCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 88887 4 349999999999999998765
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.9e-29 Score=249.21 Aligned_cols=276 Identities=14% Similarity=0.205 Sum_probs=205.9
Q ss_pred EEEEEcCC---EEEEEeCCCcEEEEeCCCC----ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 256 TGLAVGGG---FLFSSSFDKSIHVWSLKDF----SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 256 ~~l~~~~~---~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
..++++.+ ++++++.||.|+||++.+. +.+..+.+|.+.|.+++|+|.++.++++|+.||+|++||+.++...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 34677743 3445788999999999654 2345678899999999999977789999999999999999876432
Q ss_pred ----cceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe--CCEEEEEe
Q 009274 329 ----EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~s 399 (538)
..+..+..+.. ....+++++++ +++++|+.||.|++||+++++.+..+ .+|...|.+++|+ +++|++++
T Consensus 118 ~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 118 LPLREPVITLEGHTK--RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SCBCSCSEEEECCSS--CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred cccCCceEEecCCCC--eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 22333333332 23356788887 69999999999999999999999999 8899999999999 55999999
Q ss_pred cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE---eCCCcEEEEeCCcc---eeeec-cccceEEEEEe
Q 009274 400 RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS---HESGSIKVWRNDKF---MKSMQ-THKGSVFAVFL 472 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~---~~~~~-~h~~~v~~~~~ 472 (538)
.|+.|++||+++++.+..+...+.+.....+.|+|+++++++| +.|+.|++||.+.. ..... .|...+.++.+
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999999998888433333322336899999999999 79999999997642 22332 46677877766
Q ss_pred --CCCEEE-EEeCCCeEEEEecCCCe--eEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 473 --EGKWLF-TGGWDKTVSVQELAGDE--FEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 --~~~~l~-sgs~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++++|+ +|+.||.|++||+.+++ ......+. +...+....+.+++.+++ +.++.+++|++.
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~---~~~~v~~~~~sp~~~~~~-s~~~~~~~~~l~ 341 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS---SKESQRGMGYMPKRGLEV-NKCEIARFYKLH 341 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC---CSSCCSEEEECCGGGSCG-GGTEEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc---cCCcccceEEecccccce-ecceeEEEEEcC
Confidence 788886 45579999999999876 22222221 122333444445655443 467799999974
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5.8e-29 Score=240.05 Aligned_cols=231 Identities=23% Similarity=0.305 Sum_probs=182.6
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEE-----------eecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCC--
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF-- 282 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------l~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~-- 282 (538)
..+..+.+++++..++++..++.+++|+ +.+|.++|++++|+ +++|++|+.|++|++||++++
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 4578888999999999999999998886 45899999999995 689999999999999999887
Q ss_pred ceEEEEecCCcCeEEEEEecCC-CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec----------
Q 009274 283 SHVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---------- 351 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 351 (538)
+....+.+|...|.+++|+|++ +.++++|+.|++|++||+..............+.. .....+++|+
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI--GCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS--CBCCCEECCCCCC------C
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC--CcceEEEccccCCccccccc
Confidence 4667788999999999999974 67889999999999999986432111111122211 1122355554
Q ss_pred -------CCEEEEeeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEeC------CEEEEEecCCcEEEEECCCCc--
Q 009274 352 -------GRYLYTGSGDRTIKAWSLLDG---TLSCTMSGHKSAVSTLAVCN------GVLYSGSRDGTIRLWSLSDHS-- 413 (538)
Q Consensus 352 -------~~~l~sg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~------~~l~s~s~dg~i~iwd~~~~~-- 413 (538)
+++|++|+.|++|++||++.. +++..+.+|...|.+++|++ .+|++|+.|++|++||+++..
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 468999999999999999765 46778899999999999983 589999999999999997631
Q ss_pred --eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 414 --LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 414 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
....+..+ ...+.. ++|+|++++|++++.|+.|++|+..
T Consensus 252 ~~~~~~~~~~-~~~v~~-v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 252 TWSPKLLHKF-NDVVWH-VSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCBCCEEEEC-SSCEEE-EEECTTTCCEEEEESSSCEEEEEEC
T ss_pred chhhhhhhcC-CCcEEE-EEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 12223333 344444 6999999999999999999999954
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.2e-27 Score=235.66 Aligned_cols=267 Identities=12% Similarity=0.111 Sum_probs=200.9
Q ss_pred CccceeeeeccCcceeEEeecC-------CeEEEEEe-------------------ecCCCcEEEEEEcCCEEEEEe---
Q 009274 219 GADIDQARAAGGVKDLVNGLSK-------GNVKFKDL-------------------QGHRDCVTGLAVGGGFLFSSS--- 269 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~l-------------------~~h~~~V~~l~~~~~~l~s~s--- 269 (538)
+.+|.++.+.+++..++++..+ +.+++|.+ .+|.+.|.+++++++.+++|.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 4568889999999999988642 24778763 478889999999988888764
Q ss_pred --------CCCcEEEEeCCCCceEE----EE-----ecCCcCeEEEEEecCCCCEE-EEEcCCCcEEEEEccCCCCCcce
Q 009274 270 --------FDKSIHVWSLKDFSHVH----TF-----KGHDHKVMAVVYVDEDQPLC-ISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 270 --------~dg~i~iwd~~~~~~~~----~~-----~~h~~~v~~l~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
.|+.+++|++.+..... .. ..+...+.+++|+|++..++ ++++.|++|++||+.+......+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 46789999986543221 11 12445689999999887664 45668999999999876543332
Q ss_pred eeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE--ecCCCCCeEEEEEe--CCEEEEEecCC----c
Q 009274 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT--MSGHKSAVSTLAVC--NGVLYSGSRDG----T 403 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~--~~~l~s~s~dg----~ 403 (538)
. +.. ....++|+|+++++++++.+ .+.+|+..+++.+.. ..+|...|.+++|+ +.++++++.|+ .
T Consensus 174 ~----~~~--~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 174 E----TRG--EVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp E----CSS--CCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred C----CCC--ceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 2 111 12356899999999999865 567777777766543 45688899999999 45888998887 6
Q ss_pred EEEEECCCCcee----EEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceee-eccccceEEEEEe--CC
Q 009274 404 IRLWSLSDHSLL----TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKS-MQTHKGSVFAVFL--EG 474 (538)
Q Consensus 404 i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~-~~~h~~~v~~~~~--~~ 474 (538)
+++||+...... ..+..+ ...+. .++|+|+|++|++|+.|++|++||.. +++.. +.+|...|++++| ||
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~-~~~V~-~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNR-FKGIT-SMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESS-CSCEE-EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred EeecccccceecceeeeeecCC-CCCeE-eEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 889998776542 233333 33444 47999999999999999999999965 45665 4789999999987 99
Q ss_pred CEEEEEeCCCeEEEEecCCC
Q 009274 475 KWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~ 494 (538)
++|++||.|++|+|||+..+
T Consensus 325 ~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999643
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.1e-28 Score=244.61 Aligned_cols=253 Identities=14% Similarity=0.200 Sum_probs=204.4
Q ss_pred cCCeEEEEEeecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCC----------CceEEEEecCCcCeEEEEEecCCC
Q 009274 239 SKGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD----------FSHVHTFKGHDHKVMAVVYVDEDQ 305 (538)
Q Consensus 239 ~~~~~~i~~l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~ 305 (538)
..+.+.+....+|.+.|++++|+ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++.
T Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 115 VCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp ---CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST
T ss_pred CCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC
Confidence 34556667788899999999998 46899999999999999976 678889999999999999999877
Q ss_pred CEEEEEcCCCcEEEEEccCCCCCcc----eeeecccCCceeeeEEEEee-cCCEEEEeeCCCcEEEEECCCC---ceeEE
Q 009274 306 PLCISGDSGGGIFVWSFSFPLGHEP----LKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDG---TLSCT 377 (538)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~---~~~~~ 377 (538)
.++++|+.||.|++||+........ ...+..+.. ....+++++ ++.++++++.||.|++||++++ +.+..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA--VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS--CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC--CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 7999999999999999987543221 222222221 223456777 5679999999999999999987 57778
Q ss_pred ecCCCCCeEEEEEe--CC-EEEEEecCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCC-EEEEEeCCCcEEEEe
Q 009274 378 MSGHKSAVSTLAVC--NG-VLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWR 452 (538)
Q Consensus 378 ~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd 452 (538)
+..|...|++++|+ +. ++++|+.||.|++||+++ ...+..+..+ ...+.. +.|+|+++ ++++++.||.|++||
T Consensus 273 ~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~-i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQ-VQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEE-EEECSSCTTEEEEEETTSCCEEEE
T ss_pred eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEE-EEECCCCCCEEEEEeCCCcEEEEe
Confidence 88999999999999 33 799999999999999998 4567777765 344444 69999984 799999999999999
Q ss_pred CC----------------cceeeeccccceEEEEEe--CCC-EEEEEeCCCeEEEEecCCCe
Q 009274 453 ND----------------KFMKSMQTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 453 ~~----------------~~~~~~~~h~~~v~~~~~--~~~-~l~sgs~dg~v~iwd~~~~~ 495 (538)
+. +.+..+.+|...|.+++| ++. +|++++.||.|++|++....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 54 345666789999999988 666 99999999999999997543
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7e-27 Score=227.80 Aligned_cols=262 Identities=14% Similarity=0.096 Sum_probs=213.8
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEe------------ecCCCcEEEEEEc--CC-EEEEEeCCCcEEEEeC-CCC
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL------------QGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSL-KDF 282 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l------------~~h~~~V~~l~~~--~~-~l~s~s~dg~i~iwd~-~~~ 282 (538)
...+..+.+++++..++++..++.+.+|++ .+|...|++++|+ ++ +|++|+.||.|++||+ .++
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 345788888999999999999999999885 3688999999998 88 9999999999999999 776
Q ss_pred ceEEEEec--CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC---------CCCCcceeeecccCCceeeeEEEEeec
Q 009274 283 SHVHTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF---------PLGHEPLKKWNEEKDWRYSGIHALTTS 351 (538)
Q Consensus 283 ~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (538)
+. ..+.+ |...|.+++|+| +.++++++.|+.|++||+.+ ......+. + ...+.++..+
T Consensus 91 ~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----~----~~~v~~~~~~ 159 (342)
T 1yfq_A 91 SF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK----V----KNKIFTMDTN 159 (342)
T ss_dssp SE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS----S----CCCEEEEEEC
T ss_pred ce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe----e----CCceEEEEec
Confidence 55 77788 999999999998 66889999999999999986 43332222 1 1224445555
Q ss_pred CCEEEEeeCCCcEEEEECCC-Cce--eEEecCCCCCeEEEEEeC---CEEEEEecCCcEEEEECCCC------ceeEEEe
Q 009274 352 GRYLYTGSGDRTIKAWSLLD-GTL--SCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDH------SLLTVLE 419 (538)
Q Consensus 352 ~~~l~sg~~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~------~~~~~~~ 419 (538)
++.+++++.|+.|++||+++ +.. ......|...|.+++|++ +++++++.||.|++||++.. +....+.
T Consensus 160 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred CCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 55599999999999999988 543 334467889999999985 59999999999999999887 7777777
Q ss_pred cCCC-------CceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccc-cceEEEEEeCCCEEEEEeCCCe-EEE
Q 009274 420 EDSS-------GAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH-KGSVFAVFLEGKWLFTGGWDKT-VSV 488 (538)
Q Consensus 420 ~~~~-------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h-~~~v~~~~~~~~~l~sgs~dg~-v~i 488 (538)
.+.. ......++|+|++++|++++.||.|++||.. +.+..+..| ...|.++++++++|++++.||. .+.
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~Dg~~~~~ 319 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEecCCccccc
Confidence 6533 1133447999999999999999999999954 567788888 9999999999999999999998 555
Q ss_pred Eec
Q 009274 489 QEL 491 (538)
Q Consensus 489 wd~ 491 (538)
|..
T Consensus 320 ~~~ 322 (342)
T 1yfq_A 320 AAI 322 (342)
T ss_dssp SSS
T ss_pred ccc
Confidence 553
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=3.1e-28 Score=246.00 Aligned_cols=268 Identities=15% Similarity=0.159 Sum_probs=198.2
Q ss_pred cceeeeeccC-cceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceE
Q 009274 221 DIDQARAAGG-VKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHV 285 (538)
Q Consensus 221 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~ 285 (538)
.|.++.+.+. ...++++..+|.+++|++ .+|.++|++++|+ +++|+||+.||+|++||++++...
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 4778888874 567889999999999973 4799999999997 689999999999999999876544
Q ss_pred EEEec--CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCC
Q 009274 286 HTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDR 362 (538)
Q Consensus 286 ~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg 362 (538)
..... +...+.+++|+|+ +.++++|+.||.|++||++.. .+..+..+.. ....++++|+++ ++++|+.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~--~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGK----ELWNLRMHKK--KVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp EEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEEEEESSSC----BCCCSBCCSS--CEEEEEECTTCSSEEEEEETTS
T ss_pred EEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEeeeccCcc----eeEEEecccc--eEEeeeecCCCceEEEEecCcc
Confidence 33333 3346789999985 568899999999999998642 2222223322 223457777766 888999999
Q ss_pred cEEEEECCCCceeEE---ecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCc----eEEEEEEc
Q 009274 363 TIKAWSLLDGTLSCT---MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA----VSSVLSLT 433 (538)
Q Consensus 363 ~i~iwd~~~~~~~~~---~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~ 433 (538)
.|++||+++.+.... ..+|...|++++|+ +.+|++++.|+.|++||+++++....+..+.... ......++
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWH 353 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEEC
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEc
Confidence 999999988765443 35799999999999 5699999999999999999998777665432210 11113567
Q ss_pred CCCCEEEEEe------------CCCcEEEEeCC--cceeee-ccccceEEEE---EeCCCEEEEEeCCCeEEEEecCCCe
Q 009274 434 AVQHTLVVSH------------ESGSIKVWRND--KFMKSM-QTHKGSVFAV---FLEGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 434 ~~~~~l~~~~------------~dg~i~iwd~~--~~~~~~-~~h~~~v~~~---~~~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
+++..+++++ .++.|++||.. +.+..+ .+|...|.++ +++|++|++|+ |+.|+|||+++++
T Consensus 354 ~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 354 PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 7777666664 23679999954 445554 4677777765 34899999876 8899999998876
Q ss_pred e
Q 009274 496 F 496 (538)
Q Consensus 496 ~ 496 (538)
.
T Consensus 433 ~ 433 (435)
T 4e54_B 433 T 433 (435)
T ss_dssp -
T ss_pred e
Confidence 4
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.7e-27 Score=237.82 Aligned_cols=273 Identities=10% Similarity=0.078 Sum_probs=202.1
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc---eEEEEecC------------------------------------
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHTFKGH------------------------------------ 291 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~h------------------------------------ 291 (538)
.++.+++|+ |++|+++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899998 7755555 57899999999888 66665533
Q ss_pred ------------------CcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc--CCCCCcceeeecccCCceeeeEEEEeec
Q 009274 292 ------------------DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS--FPLGHEPLKKWNEEKDWRYSGIHALTTS 351 (538)
Q Consensus 292 ------------------~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (538)
.+.|.+++|+|++..++++++.||.|++||+. ++.....+.... .......++++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC---FSKRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE---CSSCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc---CCCCceEEEEcCC
Confidence 33799999999877667999999999999998 554433332211 1122335688899
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeE----EecCCCCCeEEEEEe-C---C-EEEEEecCCcEEEEECCCCceeEEEecCC
Q 009274 352 GRYLYTGSGDRTIKAWSLLDGTLSC----TMSGHKSAVSTLAVC-N---G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 352 ~~~l~sg~~dg~i~iwd~~~~~~~~----~~~~h~~~v~~l~~~-~---~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 422 (538)
+++|++|+.||.|++|++.+++... .+.+|...|++++|+ + + +|++|+.|+.|++||+++++.+..+...+
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 9999999999999999998877554 778899999999999 4 4 89999999999999999999888755444
Q ss_pred CCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccc-------------------------cceEEEEEe--C
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH-------------------------KGSVFAVFL--E 473 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h-------------------------~~~v~~~~~--~ 473 (538)
...+.. ++|+ ++++|++++.|+.|++||.. +.+..+..+ ...+.++.+ +
T Consensus 241 ~~~v~~-~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 241 KHFVSS-ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp SSCEEE-EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCceEE-EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 555555 6899 99999999999999999964 345555422 345777776 7
Q ss_pred CCEEEEEe-CCCeEEEEec--CCC---eeEeeeecCCcccCCCceEEEEEe-CCEEEEEEC-------CCeEEEEEcC
Q 009274 474 GKWLFTGG-WDKTVSVQEL--AGD---EFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCA-------DRTVKVYYYG 537 (538)
Q Consensus 474 ~~~l~sgs-~dg~v~iwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~-------dg~v~vw~~~ 537 (538)
+++|++++ .|+.|++|++ ..+ ........ + ..+..+.+. ++.+++.+. +..|.+|.+.
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~-----~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF-----P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC-----S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEecc-----C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 99999999 8999999999 443 33222221 1 234555554 444555433 4568888763
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=7e-28 Score=240.82 Aligned_cols=254 Identities=17% Similarity=0.191 Sum_probs=200.3
Q ss_pred eecCCeEEEEE-------------eecCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCc
Q 009274 237 GLSKGNVKFKD-------------LQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDH 293 (538)
Q Consensus 237 ~~~~~~~~i~~-------------l~~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~ 293 (538)
+..+|.+.+|+ +.+|.+.|++++|+ +++|++|+.||+|++||+.++ +.+..+.+|..
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 45566777775 45799999999997 789999999999999999987 67889999999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeee--cccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW--NEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD 371 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 371 (538)
.|.+++|+|++..++++++.||.|++||+.++... ..+ ..+. ......++++++++|++++.||.|++||+++
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV---LTLGPDVHP--DTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE---EEECTTTCC--SCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc---EEEecCCCC--CceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 99999999988789999999999999999865432 222 2222 2234567888999999999999999999999
Q ss_pred CceeEEe-cCCCCC-eEEEEEe--CCEEEEE---ecCCcEEEEECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEE-E
Q 009274 372 GTLSCTM-SGHKSA-VSTLAVC--NGVLYSG---SRDGTIRLWSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVV-S 442 (538)
Q Consensus 372 ~~~~~~~-~~h~~~-v~~l~~~--~~~l~s~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 442 (538)
++.+..+ .+|.+. +.++.|+ +.++++| +.|+.|++||+++++. +......+...+.. ++++|+++++++ |
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL-PFFDPDTNIVYLCG 286 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE-EEEETTTTEEEEEE
T ss_pred CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE-EEEcCCCCEEEEEE
Confidence 9999988 788876 8999999 3377777 6899999999998765 44444333444444 699999999875 5
Q ss_pred eCCCcEEEEeCCc--c-eeeecc--ccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEe
Q 009274 443 HESGSIKVWRNDK--F-MKSMQT--HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 443 ~~dg~i~iwd~~~--~-~~~~~~--h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~ 498 (538)
+.||.|++||... . ...+.. |...+.+++| ++.++++ .++.+++|++.++....
T Consensus 287 ~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~~ 347 (402)
T 2aq5_A 287 KGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCEP 347 (402)
T ss_dssp TTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEEE
T ss_pred cCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEEE
Confidence 5799999999543 2 445544 4588888887 6666654 56799999998876543
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.3e-27 Score=231.63 Aligned_cols=277 Identities=11% Similarity=0.124 Sum_probs=195.1
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
.+..+.+|.+.|++++|+ +++|++|+.|+ +++||+++++.......+ .+..+.+.++++.++++++.|++|++||
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 455678999999999999 88999888764 889999887766554433 4778888887776768888999999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeCCEEEE--E
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCNGVLYS--G 398 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~l~s--~ 398 (538)
+.+++....+. .. ..+.++..+++.++++. |+.|++||+.++ +.+..+.. +...++++.+++++ |
T Consensus 88 ~~~~~~~~~~~---~~-----~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 88 DVKKQDVSRIK---VD-----APVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp TTTTEEEEEEE---CS-----SCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEES
T ss_pred CCCCcEEEEEE---CC-----CceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCC
Confidence 98765433222 11 13556666677666654 789999999988 77666654 44445556676666 5
Q ss_pred ecCCcEEEEECCCCc----------------eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCc-EEEEeCC--cceee
Q 009274 399 SRDGTIRLWSLSDHS----------------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS-IKVWRND--KFMKS 459 (538)
Q Consensus 399 s~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~iwd~~--~~~~~ 459 (538)
+.||.|++||+++++ .+..+..| ...+.+ ++|+|++++|++|+.|++ |++||.. +.+..
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~-~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKM-VRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCC-SSCEEE-EEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEE-EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 889999999999865 15566655 444444 799999999999999998 9999964 56777
Q ss_pred ec-c-ccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCC-------------------cccCCCceEEEE
Q 009274 460 MQ-T-HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG-------------------AIPCGSVITALL 516 (538)
Q Consensus 460 ~~-~-h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 516 (538)
+. + |...|.+++| ++++|++++.|++|++||+............. .........+.+
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 77 5 9999999988 89999999999999999997653211111000 000011123334
Q ss_pred EeCC-EEEEEECCCeEEEEEcC
Q 009274 517 YWQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 517 ~~~~-~l~sg~~dg~v~vw~~~ 537 (538)
.+++ .+++++.||.+++|++.
T Consensus 314 ~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 314 ISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SSSSEEEEEETTTTEEEEEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEEEE
Confidence 4555 58889999999999863
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.9e-28 Score=260.34 Aligned_cols=243 Identities=15% Similarity=0.243 Sum_probs=194.3
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC--CCceEEEEecCCcCeEEEEEecCC-CCEEEEEcCCCcEEEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVW 320 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vw 320 (538)
..+.+|.++|++++|+ ++++++|+.||+|++||+. +++....+.+|.+.|.+++|+++. +.++++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 3578999999999998 8999999999999999997 567788899999999999998753 6789999999999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeec--CCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC----
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN---- 392 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~---- 392 (538)
|+.++... .......+. ......+++|+ ++.+++|+.||.|++||++++. ....+.+|...|.+++|++
T Consensus 83 d~~~~~~~-~~~~~~~h~--~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 83 KEENGRWS-QIAVHAVHS--ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEETTEEE-EEEEECCCS--SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred ECCCCccc-ccccccCCC--CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 99875311 222222222 22345678888 8999999999999999998873 4456678999999999984
Q ss_pred -----------CEEEEEecCCcEEEEECCCCc----eeEEEecCCCCceEEEEEEcCC---CCEEEEEeCCCcEEEEeCC
Q 009274 393 -----------GVLYSGSRDGTIRLWSLSDHS----LLTVLEEDSSGAVSSVLSLTAV---QHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 393 -----------~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~ 454 (538)
.++++|+.||.|++||++++. ....+..| ...+.. ++|+|+ ++++++|+.||.|++||..
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~-l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRD-VAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEE-EEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC-CCcEEE-EEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 489999999999999998874 34444444 444444 799999 8999999999999999965
Q ss_pred c-------ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCC
Q 009274 455 K-------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 455 ~-------~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~ 493 (538)
. .......|...|.+++| +++++++|+.||.|++||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 4 23344558888988877 899999999999999999984
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=6.6e-27 Score=236.95 Aligned_cols=268 Identities=9% Similarity=0.116 Sum_probs=202.8
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEe--------------------ecCC------------CcEEEEEEc--C--
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL--------------------QGHR------------DCVTGLAVG--G-- 262 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l--------------------~~h~------------~~V~~l~~~--~-- 262 (538)
...|.++.+++++..++++..++.+++|++ .+|. +.|++++|+ +
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 456888999999999999999999998874 4687 889999999 4
Q ss_pred CEEEEEeCCCcEEEEeCCCCceE---------------------------------------EE-EecCCcCeEEEEEec
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHV---------------------------------------HT-FKGHDHKVMAVVYVD 302 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~---------------------------------------~~-~~~h~~~v~~l~~~~ 302 (538)
.+|++++.|++|++||+.+++.. .. ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 69999999999999998764432 12 357999999999999
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCccee-----eecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCce--
Q 009274 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLK-----KWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTL-- 374 (538)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~-- 374 (538)
+ +.++++| .|+.|++||+.+........ ....+. .....++++|++ ++|++|+.||.|++||+++++.
T Consensus 188 ~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 188 D-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT--EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp T-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC--CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred C-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccC--cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 5 5577888 79999999998432111100 111121 223456888888 8999999999999999999887
Q ss_pred --eEEecCCCC------------CeEEEEEe--CCEEEEEecCCcEEEEECCC-CceeEEEecCCCCce-----------
Q 009274 375 --SCTMSGHKS------------AVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAV----------- 426 (538)
Q Consensus 375 --~~~~~~h~~------------~v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~----------- 426 (538)
+..+.+|.. .|.+++|+ +.+|++++. +.|++||+++ ++.+..+..+.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 788888876 89999999 558888888 9999999997 888877776532110
Q ss_pred --EEEEEEcCCCCEEEEEeCCCcEEEEeCCcc-eeeecc---------------------------------ccceEEEE
Q 009274 427 --SSVLSLTAVQHTLVVSHESGSIKVWRNDKF-MKSMQT---------------------------------HKGSVFAV 470 (538)
Q Consensus 427 --~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~---------------------------------h~~~v~~~ 470 (538)
...++|+|++++|++|+.||.|++||.... ...+.. +...|.++
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 011589999999999999999999996532 112222 23456667
Q ss_pred Ee--CCCEEEEEeCCCeEEEEecC
Q 009274 471 FL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 471 ~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
+| ++++|++++.++ +++|..+
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEECC
T ss_pred EECCCCCEEEEEecce-eeeeccc
Confidence 66 899999998775 7777643
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=3.8e-26 Score=222.51 Aligned_cols=245 Identities=18% Similarity=0.157 Sum_probs=184.3
Q ss_pred EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc-ceeeecccCCceeeeEEEEee--cCCEEEEeeCCC
Q 009274 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE-PLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDR 362 (538)
Q Consensus 286 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg 362 (538)
..+.+|.+.|.+++|+|+ +.++++|+.||.|++||+.+..... ....+..+.. ....+++++ ++++|++|+.||
T Consensus 5 ~~~~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS--SIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS--CEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC--cEEEEEEcCCCCCCEEEEEcCCC
Confidence 346789999999999995 5588999999999999998654332 2233333322 223456777 588999999999
Q ss_pred cEEEEECCCC---------ceeEEecCCCCCeEEEEEe----CCEEEEEecCCcEEEEECCCCceeEEEec---------
Q 009274 363 TIKAWSLLDG---------TLSCTMSGHKSAVSTLAVC----NGVLYSGSRDGTIRLWSLSDHSLLTVLEE--------- 420 (538)
Q Consensus 363 ~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------- 420 (538)
.|++||++++ +.+..+.+|...|.+++|+ +.++++++.|+.|++||+++++.+..+..
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999887 5577888999999999999 34899999999999999998875443321
Q ss_pred ---CCCCceEEEEEEcCC---CCEEEEEeCCCcEEEEeCCc----ceeeeccccceEEEEEe--CC----CEEEEEeCCC
Q 009274 421 ---DSSGAVSSVLSLTAV---QHTLVVSHESGSIKVWRNDK----FMKSMQTHKGSVFAVFL--EG----KWLFTGGWDK 484 (538)
Q Consensus 421 ---~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~----~~~~~~~h~~~v~~~~~--~~----~~l~sgs~dg 484 (538)
.+...+. .+.++|+ +.++++++.|+.+.+|+... ....+.+|...|.++.+ ++ ++|++|+.||
T Consensus 162 ~~~~~~~~~~-~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDF-CLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCE-EEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred ccCCccccee-EEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 2223333 4689987 89999999999998887432 36677889999999988 55 7999999999
Q ss_pred eEEEEecCCCee--------------------------------------------EeeeecCCcccCCCceEEEEE-eC
Q 009274 485 TVSVQELAGDEF--------------------------------------------EEDVIPTGAIPCGSVITALLY-WQ 519 (538)
Q Consensus 485 ~v~iwd~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~ 519 (538)
.|++||+..... ....... .+...+..+.+ ++
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD---DHNGEVWSVSWNLT 317 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEEC---TTSSCEEEEEECSS
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe---cccccEEEEEEcCC
Confidence 999999976421 0000111 13345666655 45
Q ss_pred C-EEEEEECCCeEEEEEcC
Q 009274 520 G-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 520 ~-~l~sg~~dg~v~vw~~~ 537 (538)
+ .|++|+.||.|++|++.
T Consensus 318 ~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp SCCEEEEETTSCEEEEEEC
T ss_pred CCEEEEecCCCcEEEEecC
Confidence 4 58899999999999986
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.8e-26 Score=216.92 Aligned_cols=267 Identities=14% Similarity=0.128 Sum_probs=182.3
Q ss_pred EEEEEeCCCcEEEEeCCCC---ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcE-EEEEccCCCCCcceeeecccCC
Q 009274 264 FLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI-FVWSFSFPLGHEPLKKWNEEKD 339 (538)
Q Consensus 264 ~l~s~s~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~~~~~ 339 (538)
.+++++ ...|++|+..++ +.+++++.|+.+|..+.+.|+..+++..+=.+=.+ .++-+.................
T Consensus 56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 566676 559999999998 88999999999999999999766655443211111 1222221111000000000000
Q ss_pred ceeeeEEEEeecCCEEEEee--CCCcEEEEEC-CCCceeEEecCCCCCeEEEEEeC-----CEEEEEecCCcEEEEECCC
Q 009274 340 WRYSGIHALTTSGRYLYTGS--GDRTIKAWSL-LDGTLSCTMSGHKSAVSTLAVCN-----GVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~--~dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~iwd~~~ 411 (538)
+...+..+ ++++.+.+++ .|+.|++|++ .+++.+..+.+|...++.++|+. .+|++++.|++|++||+++
T Consensus 135 -~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 135 -NIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp -EEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred -CeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 11223333 3454555533 5999999999 45888888889999998888882 5999999999999999999
Q ss_pred CceeEEEecCCCC-ceEEEEEEcCCCCEE------------EEEeCCCcEEEEeCCc--ceeee-----ccccceEEEEE
Q 009274 412 HSLLTVLEEDSSG-AVSSVLSLTAVQHTL------------VVSHESGSIKVWRNDK--FMKSM-----QTHKGSVFAVF 471 (538)
Q Consensus 412 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~--~~~~~-----~~h~~~v~~~~ 471 (538)
+++++++..++.. .....++|+|++.++ ++|+.|++|++||..+ .+..+ .+|...+.+.+
T Consensus 213 Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 213 GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE
T ss_pred CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc
Confidence 9999999765421 222335899999876 5688899999999554 33332 46777777777
Q ss_pred eCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceE-EEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 472 LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVIT-ALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 472 ~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
+++.++++|+.|++|+|||+.+++....+... ...++. +.+.+|+. |++|+.|++|+|||+.
T Consensus 293 ~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH----~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 293 VKDHCAAAILTSGTIAIWDLLLGQCTALLPPV----SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EETTEEEEEETTSCEEEEETTTCSEEEEECCC------CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred cCCCEEEEEcCCCcEEEEECCCCcEEEEecCC----CCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 78999999999999999999999877765422 222344 45666665 8899999999999974
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=4.4e-26 Score=224.13 Aligned_cols=265 Identities=15% Similarity=0.170 Sum_probs=209.8
Q ss_pred CCccceeeeeccC---cceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC
Q 009274 218 DGADIDQARAAGG---VKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD 281 (538)
Q Consensus 218 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~ 281 (538)
....+.++.+.++ +..++++..++.+++|++ .+|.+.|++++|+ +++|++++.||.|++||+.+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 3456888889888 488999999999999875 4699999999998 88999999999999999999
Q ss_pred CceEEEEecCCcCeEEEEE--ecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee
Q 009274 282 FSHVHTFKGHDHKVMAVVY--VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (538)
Q Consensus 282 ~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 359 (538)
++.+. +..|...|.+++| ++ ++.++++++.||.|++||+++++....+.. +. .+.++.+.+..+++++
T Consensus 118 ~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 118 NQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQL---PE-----RCYCADVIYPMAVVAT 187 (368)
T ss_dssp TEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEEC---SS-----CEEEEEEETTEEEEEE
T ss_pred CCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEec---CC-----CceEEEecCCeeEEEe
Confidence 88776 5669999999999 55 456789999999999999987654433332 21 2556677788999999
Q ss_pred CCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe--CC----EEEEEecCCcEEEEECCCC---ceeEEEecCCCCc---
Q 009274 360 GDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC--NG----VLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSGA--- 425 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~----~l~s~s~dg~i~iwd~~~~---~~~~~~~~~~~~~--- 425 (538)
.++.+++||++........ ..+...+.++.+. .. .+++++.|+.|++||++.. .....+..+....
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 9999999999876543332 2344455666654 32 3999999999999999987 4566666553210
Q ss_pred -------eEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecC
Q 009274 426 -------VSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 426 -------~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~ 492 (538)
....++|+|++++|++++.||.|++||.. +.+..+..|...|.+++| ++++|++++.|+..+.|++.
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred cccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 23447999999999999999999999965 467788899999999988 89999999999866655543
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-26 Score=226.47 Aligned_cols=225 Identities=13% Similarity=0.049 Sum_probs=171.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC------CCcceeeec
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL------GHEPLKKWN 335 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~ 335 (538)
+.++++|+.||+|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+..... ....+....
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 7899999999999999999999988887 467788888875 8999999999999876321 112122222
Q ss_pred ccCCceeeeEEEEee--cCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEe--CCEEEEEecCCcEEEEECC
Q 009274 336 EEKDWRYSGIHALTT--SGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 410 (538)
.... .....++++| +++++++|+.||+|++||+++++...... .|...|.+++|+ +.++++|+.||.|++||++
T Consensus 122 ~~~~-~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 122 VDSA-NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCCS-SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred cCCC-CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 1111 1233457788 88999999999999999999999877664 455689999999 5599999999999999999
Q ss_pred CCcee-EEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc--eeeecc---ccceEE--EEEe--CCCEEEEE
Q 009274 411 DHSLL-TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQT---HKGSVF--AVFL--EGKWLFTG 480 (538)
Q Consensus 411 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~---h~~~v~--~~~~--~~~~l~sg 480 (538)
+++.+ ..+...|...+.. ++|+|++.+|++++ |+.|++||+++. ...+.. |...+. +++| ++++|+++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~-l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKE-VKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CTTSCCEECCCCTTSCEEE-EEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCccEEeccCCCCEEE-EEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 99887 7777634555555 69999999999999 559999997643 233332 434433 3555 89999999
Q ss_pred eC-CCeEEEEecCCCe
Q 009274 481 GW-DKTVSVQELAGDE 495 (538)
Q Consensus 481 s~-dg~v~iwd~~~~~ 495 (538)
+. |+.+++|++....
T Consensus 279 s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKT 294 (343)
T ss_dssp ETTTTEEEEEEECTTT
T ss_pred cCCCCcEEEEEEcccc
Confidence 98 9999999996654
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.7e-26 Score=223.48 Aligned_cols=231 Identities=22% Similarity=0.291 Sum_probs=187.3
Q ss_pred ccceeeeeccCcceeEEeecCCeEEEEEe-----------ecCCCcEEEEEEc----CCEEEEEeCCCcEEEEeCCCCc-
Q 009274 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFS- 283 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-----------~~h~~~V~~l~~~----~~~l~s~s~dg~i~iwd~~~~~- 283 (538)
..+..+.+.+++..++++..++.+.+|++ .+|.+.|++++|+ +++|++|+.||.|++||+.+++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 45778888899999999999999999975 3799999999997 7999999999999999999987
Q ss_pred -eEEEEecCCcCeEEEEEecCC-CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-----------
Q 009274 284 -HVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT----------- 350 (538)
Q Consensus 284 -~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 350 (538)
.+..+..|...|.+++|+|+. +.++++++.||.|++||+........... ..+. ......+++|
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~--~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHA--IGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCT--TCEEEEEECCCC---------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCC--CceEEEEEcCccccccccccC
Confidence 778888899999999999864 67889999999999999987644333222 2222 1223456777
Q ss_pred --cCCEEEEeeCCCcEEEEECCCCc----eeEEecCCCCCeEEEEEe-C----CEEEEEecCCcEEEEECCCCce---eE
Q 009274 351 --SGRYLYTGSGDRTIKAWSLLDGT----LSCTMSGHKSAVSTLAVC-N----GVLYSGSRDGTIRLWSLSDHSL---LT 416 (538)
Q Consensus 351 --~~~~l~sg~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~-~----~~l~s~s~dg~i~iwd~~~~~~---~~ 416 (538)
+++++++|+.||.|++||+++++ ....+.+|...|.+++|+ + ++|++++.||.|++||++++.. ..
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 248 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT 248 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceee
Confidence 68899999999999999998764 456778899999999999 3 4899999999999999998752 22
Q ss_pred EEec-CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 417 VLEE-DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 417 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
.... .+...+ ..++|+|++++|++++.||.|++||..
T Consensus 249 ~~~~~~~~~~v-~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 249 LLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ESSSSCCSSCE-EEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eeccccCCCcE-EEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 2222 123334 447999999999999999999999954
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-27 Score=234.94 Aligned_cols=256 Identities=11% Similarity=0.067 Sum_probs=192.5
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (538)
.-...|.+++|+ |+++||++.|++|+ |...++.+ ++|...|.+++|+|++ .++.+.+|+.+ .
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg--------~~~~~~~~~~~---~ 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE--------FENKLDFELAQ---Q 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC--------CCCTTTTSCCC---S
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC--------CcceEEEEeCC---C
Confidence 345889999999 99999999999999 76665544 7999999999999976 45555555543 2
Q ss_pred CcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----CeEEEEEe--CCEEEEEec
Q 009274 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----AVSTLAVC--NGVLYSGSR 400 (538)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~~--~~~l~s~s~ 400 (538)
...+.. .+ ......++++|+|..|++++.||.|++||..+ ++..+. |.. .|.+++|+ +++|++|+.
T Consensus 77 ~~~~~~--~~--~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 77 NGLLNS--QP--VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp SCSSTT--SC--SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred ceEeec--CC--CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 221111 11 13445679999999999999999999999544 666666 665 49999999 569999999
Q ss_pred CCcEEEEECCCCce-------eEEEe---cCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce-----eee-cccc
Q 009274 401 DGTIRLWSLSDHSL-------LTVLE---EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM-----KSM-QTHK 464 (538)
Q Consensus 401 dg~i~iwd~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~-~~h~ 464 (538)
||+|++||+.++.. +.++. ..|...+.. ++|+|+| +++++.|+.|++||..... +++ .+|.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s-VawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH-IVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE-EEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEE-EEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 99999999998863 56663 223455555 6999999 8889999999999964322 346 4788
Q ss_pred ceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE--EeCCE-EEEEECCCeEEEEEcC
Q 009274 465 GSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL--YWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 465 ~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
..|.+++|.|+.|++++ +++|++||+.+++....... +...+....+ .+++. +++++.||+ ++|.+.
T Consensus 227 ~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~g----h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 227 RKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTG----SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECS----CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcC----CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999999778999997 69999999999887433321 1222333344 45665 777888999 999874
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.7e-25 Score=225.45 Aligned_cols=239 Identities=14% Similarity=0.107 Sum_probs=188.7
Q ss_pred cCCCcEEEEEEc--CCEE-EEEeCCCcEEEEeCC--CCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 250 GHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLK--DFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l-~s~s~dg~i~iwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
+|.+.|++++|+ +++| ++|+.||+|++||+. +++.+..+. .|...|.+++|+|++ .++++|+.||.+++|++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEec
Confidence 345579999999 7885 899999999999999 888888886 577899999999954 57799999999999999
Q ss_pred cCCCCCc-ceeeecccCCceeeeEEEEeec---CCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CCEEE
Q 009274 323 SFPLGHE-PLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NGVLY 396 (538)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~~l~ 396 (538)
.+..... ....+..+.. ....++++|+ +++|++|+.|+.|++||+++++.+.. +.+|...|.+++|+ +++|+
T Consensus 179 ~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~ 256 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVS--MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLL 256 (450)
T ss_dssp TSCCCSSCCCCCSEECSS--CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEE
T ss_pred CCcccccccceeeecccC--ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEE
Confidence 8766543 2223222322 2335688999 88999999999999999999998887 56899999999998 66999
Q ss_pred EEecCCcEEEEECCCCceeEEEecCC-----------------------CCceEEEEEEcCCCCEEEEEe-CCCcEEEEe
Q 009274 397 SGSRDGTIRLWSLSDHSLLTVLEEDS-----------------------SGAVSSVLSLTAVQHTLVVSH-ESGSIKVWR 452 (538)
Q Consensus 397 s~s~dg~i~iwd~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd 452 (538)
+++.|+.|++||+++++.+..+..+. .......++++|+++++++++ .|+.|++||
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 99999999999999999888876321 112234478999999999999 899999999
Q ss_pred C--C-----cceeeeccccceEEEEEeC-CCEEEEEeC-------CCeEEEEecC
Q 009274 453 N--D-----KFMKSMQTHKGSVFAVFLE-GKWLFTGGW-------DKTVSVQELA 492 (538)
Q Consensus 453 ~--~-----~~~~~~~~h~~~v~~~~~~-~~~l~sgs~-------dg~v~iwd~~ 492 (538)
. . +.+..+..| ..+.++++. +..+++.+. +..|.+|.+.
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8 2 245566777 889999883 344554433 4557888764
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-26 Score=222.35 Aligned_cols=259 Identities=11% Similarity=0.038 Sum_probs=193.8
Q ss_pred cCcceeEEeecCCeEEEEEeecCC-------CcEEEEEEcCCEEEEEeCCCcEEEEeCC---------CCceEEEEe-cC
Q 009274 229 GGVKDLVNGLSKGNVKFKDLQGHR-------DCVTGLAVGGGFLFSSSFDKSIHVWSLK---------DFSHVHTFK-GH 291 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~l~~h~-------~~V~~l~~~~~~l~s~s~dg~i~iwd~~---------~~~~~~~~~-~h 291 (538)
.++..++++..++.+++|++.... ..|.++.++.. +++++.|++|++|+.. +++.+..+. +|
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 456788999999999999986543 44555566655 9999999999999665 555555555 67
Q ss_pred CcCeEEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECC
Q 009274 292 DHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (538)
Q Consensus 292 ~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~ 370 (538)
.+.|.+++|+|. ++.++++++.||+|++||++++.. ......+.. ......+++|++.++++|+.||.|++||++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~-~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSD-VEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSS-CCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCC-CceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 789999999981 345789999999999999987654 222212221 223467899999999999999999999999
Q ss_pred CCcee-EEecC-CCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEec---CCCCceEEEEEEcCCCCEEEEEe
Q 009274 371 DGTLS-CTMSG-HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEE---DSSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 371 ~~~~~-~~~~~-h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
+++.+ ..+.. |.++|++++|+ +.+|++++ |+.|++||+++++....+.. +........++|+|++++|++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence 99987 78887 99999999999 45888888 55999999999877654432 11110113479999999999999
Q ss_pred C-CCcEEEEeCCcceeeeccccceEEEEEe-----CCCEEEEEeCCCeEEEEecCCCe
Q 009274 444 E-SGSIKVWRNDKFMKSMQTHKGSVFAVFL-----EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 444 ~-dg~i~iwd~~~~~~~~~~h~~~v~~~~~-----~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
. |+.+++|+..+....+.. .++..+.+ +...+++++.||.++++-.....
T Consensus 280 ~~d~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 280 NESNSLTIYKFDKKTKNWTK--DEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp TTTTEEEEEEECTTTCSEEE--EEEEECCC----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred CCCCcEEEEEEcccccceEe--cCceeEecCccccccceeEEEecCCceEEEEecCCe
Confidence 8 999999996543333332 34444443 56789999999999988765554
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=3.4e-25 Score=217.19 Aligned_cols=258 Identities=13% Similarity=0.170 Sum_probs=193.9
Q ss_pred CccceeeeeccCcceeEEeecCCeEEEEEeec-------CCCcEEEEEEc--CCEE-EEEeCCCcEEEEeCCCCceEEEE
Q 009274 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDLQG-------HRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTF 288 (538)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-------h~~~V~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~ 288 (538)
...+.++.+++++..++++..++ +++|++.. +...+..+++. ++.+ ++++.|++|++||..+++.+..+
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 34578899999999888887664 67887432 22346666666 5655 67888999999999999999988
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC-CCCcceeeecccCCceeeeEEEEeecCCEEEE--eeCCCcEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT--GSGDRTIK 365 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~ 365 (538)
. |...|.++.|+++ .++.+ .|+.|++||+.+. +....+.. ...+.++++ +++++ |+.||.|+
T Consensus 98 ~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~~~s~--~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 98 K-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVCEFSN--GLLVYSNEFNLGQIH 162 (355)
T ss_dssp E-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEEEEET--TEEEEEESSCTTCEE
T ss_pred E-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc--------CCceEEEEc--cEEEEeCCCcCcEEE
Confidence 7 6779999999763 33333 4789999999876 44433332 233556666 65655 68999999
Q ss_pred EEECCCCc----------------eeEEecCCCCCeEEEEEe--CCEEEEEecCCc-EEEEECCCCceeEEEe-cCCCCc
Q 009274 366 AWSLLDGT----------------LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT-IRLWSLSDHSLLTVLE-EDSSGA 425 (538)
Q Consensus 366 iwd~~~~~----------------~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~-i~iwd~~~~~~~~~~~-~~~~~~ 425 (538)
+||+++++ .+..+.+|.+.|++++|+ +.+|++|+.|++ |++||+++++.+..+. +.+...
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 99998865 277889999999999999 559999999998 9999999999999998 324555
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce----eeecc---------------------ccceEEEEEe--CCCEEE
Q 009274 426 VSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM----KSMQT---------------------HKGSVFAVFL--EGKWLF 478 (538)
Q Consensus 426 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~---------------------h~~~v~~~~~--~~~~l~ 478 (538)
+.. ++|+|++++|++++.|++|++||..... ..+.. +......++| +++.|+
T Consensus 243 v~~-~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 243 VVD-MKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp EEE-EEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred EEE-EEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 555 6999999999999999999999965321 11111 1111133444 899999
Q ss_pred EEeCCCeEEEEecCC
Q 009274 479 TGGWDKTVSVQELAG 493 (538)
Q Consensus 479 sgs~dg~v~iwd~~~ 493 (538)
+++.||.+++|++..
T Consensus 322 ~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 322 VWPHTRMIETFKVVF 336 (355)
T ss_dssp EETTTTEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEc
Confidence 999999999999854
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=6.5e-24 Score=211.01 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=190.6
Q ss_pred EEEEEeecCCCcEEEEEEc--CCEE-EEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEE
Q 009274 243 VKFKDLQGHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 319 (538)
..+..+.+|. .+.+++|+ ++++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|++..++++++.++.|++
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 3444556665 48999998 6666 677799999999999999999888665 89999999988877788888999999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEE-EEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEE-
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL-YTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVL- 395 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l- 395 (538)
||+.+++....+ ..+. .....+++++++.+ ++++.|+.|++||+.+++.+..+..+ ..+.+++|+ ++.+
T Consensus 101 ~d~~~~~~~~~~---~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 101 IDTTSNTVAGTV---KTGK---SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVY 173 (391)
T ss_dssp EETTTTEEEEEE---ECSS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEE
T ss_pred EECCCCeEEEEE---eCCC---CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEE
Confidence 999876433222 2222 12356788999866 78888999999999999998888765 456999998 4455
Q ss_pred EEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe---CCCcEEEEeCC--cceeeeccccceEEEE
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH---ESGSIKVWRND--KFMKSMQTHKGSVFAV 470 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~--~~~~~~~~h~~~v~~~ 470 (538)
++++.|+.|++||+++++....+... .. ...++++|+++++++++ .++.|++||.. +.+..+..|.. +.++
T Consensus 174 ~~~~~~~~v~~~d~~~~~~~~~~~~~--~~-~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 249 (391)
T 1l0q_A 174 VANFDSMSISVIDTVTNSVIDTVKVE--AA-PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGI 249 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS--SE-EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEEecC--CC-ccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEE
Confidence 67788999999999999888777643 22 34479999999999888 68999999965 45566666654 5666
Q ss_pred Ee--CCCEE-EEEeCCCeEEEEecCCCeeEeee
Q 009274 471 FL--EGKWL-FTGGWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 471 ~~--~~~~l-~sgs~dg~v~iwd~~~~~~~~~~ 500 (538)
.+ +++++ ++++.|+.|++||+.+++.....
T Consensus 250 ~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 250 AVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 55 78877 67788999999999988766544
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=6.4e-25 Score=221.27 Aligned_cols=257 Identities=16% Similarity=0.230 Sum_probs=187.4
Q ss_pred EEEEeCCCCce-EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC-------CCcceeeecccCCceeeeE
Q 009274 274 IHVWSLKDFSH-VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL-------GHEPLKKWNEEKDWRYSGI 345 (538)
Q Consensus 274 i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~ 345 (538)
+..+...+++. ......|.+.|++++|+|+++.++++++.||.|++||+.... .......+..+.. ....
T Consensus 109 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~ 186 (430)
T 2xyi_A 109 FGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK--EGYG 186 (430)
T ss_dssp ---------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS--CCCC
T ss_pred cccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC--CeEE
Confidence 33343334433 244567999999999999878899999999999999998621 1222333333322 2234
Q ss_pred EEEeecCC-EEEEeeCCCcEEEEECCCCce-------eEEecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCCC--
Q 009274 346 HALTTSGR-YLYTGSGDRTIKAWSLLDGTL-------SCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDH-- 412 (538)
Q Consensus 346 ~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~-- 412 (538)
+++++++. +|++|+.||.|++||+.++.. ...+.+|...|.+++|+ +.++++++.|+.|++||++++
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 57888888 999999999999999987432 45667899999999998 348999999999999999987
Q ss_pred -ceeEEEecCCCCceEEEEEEcCCCC-EEEEEeCCCcEEEEeCCc---ceeeeccccceEEEEEe--CC-CEEEEEeCCC
Q 009274 413 -SLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EG-KWLFTGGWDK 484 (538)
Q Consensus 413 -~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~h~~~v~~~~~--~~-~~l~sgs~dg 484 (538)
+.+..+..+ ...+. .++|+|++. ++++|+.||.|++||.+. ++..+..|...|.++.| ++ .+|++++.||
T Consensus 267 ~~~~~~~~~~-~~~v~-~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 267 SKPSHTVDAH-TAEVN-CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSCSEEEECC-SSCEE-EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeEeecC-CCCeE-EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 466666554 33444 479999887 788999999999999653 57788899999999988 55 5799999999
Q ss_pred eEEEEecCCCee------------EeeeecCCcccCCCceEEEEEe-CC--EEEEEECCCeEEEEEcC
Q 009274 485 TVSVQELAGDEF------------EEDVIPTGAIPCGSVITALLYW-QG--KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 485 ~v~iwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-~~--~l~sg~~dg~v~vw~~~ 537 (538)
.|++||+..... .....+.. +...+..+.+. ++ .+++++.||.|++|++.
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC---CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCC---CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999986211 11111111 33445655554 44 58889999999999985
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=4.3e-24 Score=212.30 Aligned_cols=258 Identities=14% Similarity=0.115 Sum_probs=197.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCcee
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY 342 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 342 (538)
..+++++.|+.|++||+.+++.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++....+ ..+. .
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~~---~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PAGS---S 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECSS---S
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---ECCC---C
Confidence 367888999999999999999999988775 48999999988777789999999999999866433222 2222 2
Q ss_pred eeEEEEeecCCEEE-EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEE-EEEecCCcEEEEECCCCceeEEE
Q 009274 343 SGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVL-YSGSRDGTIRLWSLSDHSLLTVL 418 (538)
Q Consensus 343 ~~~~~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~ 418 (538)
....++++++++++ +++.++.|++||+.+++.+..+..+ ..+.+++|+ ++.+ ++++.|+.|++||+++++.+..+
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 33568889999775 5556799999999999988888754 568999999 3455 78888999999999999988887
Q ss_pred ecCCCCceEEEEEEcCCCCEE-EEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEe---CCCeEEEEe
Q 009274 419 EEDSSGAVSSVLSLTAVQHTL-VVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGG---WDKTVSVQE 490 (538)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs---~dg~v~iwd 490 (538)
..+.. . ..++++|+++.+ ++++.++.|++||... ....+. +...+.++.+ ++++|++++ .++.|++||
T Consensus 155 ~~~~~--~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 155 SVGRS--P-KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp ECCSS--E-EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred ecCCC--c-ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 76432 3 447999999887 5677889999999654 333333 4556777776 788888888 689999999
Q ss_pred cCCCeeEeeeecCCcccCCCceEEEEEeCC-EE-EEEECCCeEEEEEcC
Q 009274 491 LAGDEFEEDVIPTGAIPCGSVITALLYWQG-KL-FVGCADRTVKVYYYG 537 (538)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l-~sg~~dg~v~vw~~~ 537 (538)
+.+++........ ..+....+.+++ .+ ++++.|+.|++||+.
T Consensus 231 ~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 231 TGTNKITARIPVG-----PDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp TTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEEecC-----CCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 9988766554432 123334445566 45 467889999999975
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7e-26 Score=244.16 Aligned_cols=246 Identities=13% Similarity=0.140 Sum_probs=182.3
Q ss_pred EEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeec--CCEEEEeeCCCc
Q 009274 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRT 363 (538)
Q Consensus 286 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~ 363 (538)
..+.+|.+.|++++|+|++. ++++|+.||.|++||+..+.. ........+.. ....++++++ ++++++|+.||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~-~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~--~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEGETH-KLIDTLTGHEG--PVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSSC-CEEEEETTTEEEEEEEETTEE-EEEEEECCCSS--CEEEEEECCTTSCSEEEEEETTSC
T ss_pred eecccCcceeEEEEECCCCC-eEEEEECCCcEEEEecCCCCC-ccceeccCCcC--ceEEEEecCCCCCCEEEEEeCCCe
Confidence 46789999999999999655 679999999999999874321 22333333322 2234566666 889999999999
Q ss_pred EEEEECCCCc--eeEEecCCCCCeEEEEEe----CCEEEEEecCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcC-
Q 009274 364 IKAWSLLDGT--LSCTMSGHKSAVSTLAVC----NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTA- 434 (538)
Q Consensus 364 i~iwd~~~~~--~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~- 434 (538)
|++||+.+++ .+..+.+|...|++++|+ ++++++|+.||.|++||++++.. ...+..+ ...+.. +.|+|
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~-l~~~p~ 156 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNS-ASWAPA 156 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC-SSCEEE-EEECCC
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC-CCceEE-EEecCc
Confidence 9999999887 677888999999999999 34999999999999999998743 3333333 344444 68888
Q ss_pred ------------CCCEEEEEeCCCcEEEEeCC------cceeeeccccceEEEEEe--C---CCEEEEEeCCCeEEEEec
Q 009274 435 ------------VQHTLVVSHESGSIKVWRND------KFMKSMQTHKGSVFAVFL--E---GKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 435 ------------~~~~l~~~~~dg~i~iwd~~------~~~~~~~~h~~~v~~~~~--~---~~~l~sgs~dg~v~iwd~ 491 (538)
++.++++|+.||.|++||.+ .....+.+|...|.++++ + +++|++|+.||.|++||+
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp C---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred ccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 58999999999999999954 345677889999999987 5 889999999999999999
Q ss_pred CCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCCeEEEEEcC
Q 009274 492 AGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg~v~vw~~~ 537 (538)
.++.............+...+..+.+ +++ .+++|+.||.|++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 88642211111111113334444444 555 48889999999999985
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-25 Score=224.73 Aligned_cols=250 Identities=11% Similarity=0.066 Sum_probs=188.2
Q ss_pred ceeeeeccCcceeEEeecCCeEEE----EEeecCCCcEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeE
Q 009274 222 IDQARAAGGVKDLVNGLSKGNVKF----KDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVM 296 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i----~~l~~h~~~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~ 296 (538)
+..+.++++++.+++++.++.++- ..+++|...|.+++|+..- .++.+.+|+. +....+. .|...|.
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-----~~~~~~~~~~---~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-----FENKLDFELA---QQNGLLNSQPVCYPR 89 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-----CCCTTTTSCC---CSSCSSTTSCSCCEE
T ss_pred EEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-----CcceEEEEeC---CCceEeecCCCCcEE
Confidence 667889999999999999998861 1257899999999998211 4555555543 3222333 4688999
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC---ceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc
Q 009274 297 AVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD---WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (538)
Q Consensus 297 ~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~ 373 (538)
+++|+|++. ++++++.||.|++||... .+.... +.. .......+|+|+|++|++|+.||+|++||+.++.
T Consensus 90 ~vawSPdG~-~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 90 VCKPSPIDD-WMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp EEEECSSSS-CEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEEECCCCC-EEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 999999655 669999999999999543 222222 221 1123367899999999999999999999999875
Q ss_pred e-------eEEe----cCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCCCE
Q 009274 374 L-------SCTM----SGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 374 ~-------~~~~----~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
. +.++ .+|.+.|.+++|+ ++ +++++.|+++++||+.++.. ..++...+...+.. ++|+ ++.
T Consensus 163 l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s-vaFs--g~~ 238 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD-LKIV--DYK 238 (588)
T ss_dssp TTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC-EEEE--TTE
T ss_pred cccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE-EEEE--CCE
Confidence 3 5666 6788999999999 55 99999999999999988774 34564344444444 5777 688
Q ss_pred EEEEeCCCcEEEEeCCccee-eec-cccceEEEEEe----CCCEEEEEeCCCeEEEEecC
Q 009274 439 LVVSHESGSIKVWRNDKFMK-SMQ-THKGSVFAVFL----EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 439 l~~~~~dg~i~iwd~~~~~~-~~~-~h~~~v~~~~~----~~~~l~sgs~dg~v~iwd~~ 492 (538)
+++++ +++|++||...... .+. +|...+..+.+ ++..+++++.||+ ++|...
T Consensus 239 LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99887 69999999654333 444 89999987766 6778999999999 999975
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1e-23 Score=212.57 Aligned_cols=278 Identities=14% Similarity=0.111 Sum_probs=205.5
Q ss_pred EEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEE-----EEecCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 243 VKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH-----TFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
..+..+..+. .+.+++|+ +.++++++.|+.|++||+.+++... .+.+|...|.+++|++ ++.++++++.|+
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~ 191 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQAN 191 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGT
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCC
Confidence 3445555554 45589998 5677777888999999999998887 3457889999999966 566889999999
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEE-EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (538)
.|++||+.+++....+. .+. ......+++++++.++ +++.|+.|++||+++++.+..+..+ ..+.+++|+ +
T Consensus 192 ~v~~~d~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g 265 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVD---LTG--KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDG 265 (433)
T ss_dssp EEEEEETTTCCEEEEEE---CSS--SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTS
T ss_pred EEEEEECCCceEEEEEc---CCC--CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCC
Confidence 99999998654333222 221 1223568889998775 5557999999999999988887754 558999998 4
Q ss_pred CEEEEEe--------cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE-EEEeCCCcEEEEeCCc--ceeeec
Q 009274 393 GVLYSGS--------RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL-VVSHESGSIKVWRNDK--FMKSMQ 461 (538)
Q Consensus 393 ~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~--~~~~~~ 461 (538)
+.+++++ .|+.|++||+++++....+... .... .++++|+++.+ ++++.|+.|++||..+ ....+.
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~-~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKR-HIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEE-EEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcc-eEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 4888887 4889999999999877766432 2233 36899999755 5668999999999653 344443
Q ss_pred cccceEEEEEe--CCCEEEEEeC---------------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EE
Q 009274 462 THKGSVFAVFL--EGKWLFTGGW---------------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KL 522 (538)
Q Consensus 462 ~h~~~v~~~~~--~~~~l~sgs~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l 522 (538)
+...+.++++ +++++++++. ||.|++||+.+++........ . .+..+.+ +++ .|
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-----~-~~~~~~~s~dg~~l 415 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-----N-QPTGLDVSPDNRYL 415 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-----S-SEEEEEECTTSCEE
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-----C-CCceEEEcCCCCEE
Confidence 5667777776 7888888876 579999999998876655431 2 3344444 565 46
Q ss_pred EEEEC-CCeEEEEEcCC
Q 009274 523 FVGCA-DRTVKVYYYGK 538 (538)
Q Consensus 523 ~sg~~-dg~v~vw~~~~ 538 (538)
++++. |+.|++|+++.
T Consensus 416 ~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 416 VISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEETT
T ss_pred EEEECCCCeEEEEEecC
Confidence 66664 99999999863
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=2.9e-24 Score=201.94 Aligned_cols=180 Identities=13% Similarity=0.090 Sum_probs=142.6
Q ss_pred CCCcEEEEeC-CCCceEEEEecCCcCeEEEEEec--CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC-ceeeeE
Q 009274 270 FDKSIHVWSL-KDFSHVHTFKGHDHKVMAVVYVD--EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD-WRYSGI 345 (538)
Q Consensus 270 ~dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~ 345 (538)
.|+.|++|++ .+++.+..+.+|...+..++|++ .++.++++++.|++|++||+.+++....+.. +.. ......
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g---~~~~v~~v~~ 231 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI---DDSYQASVCH 231 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC---CC---CCCEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC---CCcceeeeEE
Confidence 4999999999 55888899999999998888887 4567999999999999999998765555432 211 112223
Q ss_pred EEEeecCCEE------------EEeeCCCcEEEEECCCCceeEEe-----cCCCCCeEEEEEeCCEEEEEecCCcEEEEE
Q 009274 346 HALTTSGRYL------------YTGSGDRTIKAWSLLDGTLSCTM-----SGHKSAVSTLAVCNGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 346 ~~~~~~~~~l------------~sg~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd 408 (538)
.+|+|++.++ ++|+.|++|++||..+++.+..+ .+|...+.+..+++.++++++.|++|++||
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEE
Confidence 4788988865 66889999999999999887765 477777777777788999999999999999
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 009274 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (538)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 453 (538)
+.+++++.++..|...... .++|+|||++|++|+.|++|++||.
T Consensus 312 l~tGk~l~tL~gH~~~vvs-~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSDQHWS-FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC--CCCC-EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCCCeEE-EEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999876544443 3699999999999999999999984
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=9.3e-25 Score=217.26 Aligned_cols=227 Identities=10% Similarity=0.026 Sum_probs=148.6
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCc--ceeeecccCCceeeeEEEEee--------cCCEEEEeeCCCcEEEEECCC
Q 009274 302 DEDQPLCISGDSGGGIFVWSFSFPLGHE--PLKKWNEEKDWRYSGIHALTT--------SGRYLYTGSGDRTIKAWSLLD 371 (538)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~l~sg~~dg~i~iwd~~~ 371 (538)
+.+..++++++.|++|++||.+++.... .+.....|.. ....++|+| ++++|++|+.|++|++||+++
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~--~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN--FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS--CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC--ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3345688999999999999998764322 1222333333 223346665 788999999999999999999
Q ss_pred CceeEEecCCCCCeEEEEEeC---CEEEEEecCCcEEEEECCCCceeEEEec------------------------CCCC
Q 009274 372 GTLSCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEE------------------------DSSG 424 (538)
Q Consensus 372 ~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~------------------------~~~~ 424 (538)
+.++..+.+|..+|.+++|++ .+|++++.|++|++||+++++....... .+..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 988888888999999999993 3799999999999999998765433221 1122
Q ss_pred ceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEEEE-------------------Ee---CCCEEEEE
Q 009274 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAV-------------------FL---EGKWLFTG 480 (538)
Q Consensus 425 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~-------------------~~---~~~~l~sg 480 (538)
.+..+..+.++++.+++++.|+++++||.. +....+..|...+..+ .+ ++.++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 333433456899999999999999999954 2333344443333221 11 44577888
Q ss_pred eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCE-EEEEECCCeEEEEEc
Q 009274 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGK-LFVGCADRTVKVYYY 536 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l~sg~~dg~v~vw~~ 536 (538)
+.||.|++||+.+++....... +...+..+.| ++++ |++++.|| +.+|++
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~-----~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQ-----LGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEE-----CSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecC-----CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 8999999999998765443332 2334555554 5776 55566555 666554
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.9e-25 Score=219.96 Aligned_cols=224 Identities=13% Similarity=0.133 Sum_probs=158.0
Q ss_pred eeccCcceeEEeecCCeEEEEE--------------eecCCCcEEEEEEc----------CCEEEEEeCCCcEEEEeCCC
Q 009274 226 RAAGGVKDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG----------GGFLFSSSFDKSIHVWSLKD 281 (538)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~--------------l~~h~~~V~~l~~~----------~~~l~s~s~dg~i~iwd~~~ 281 (538)
........++++..++.+++|+ +.||.+.|++++|+ +++|+||+.|++|+|||+.+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3445566788899999999986 35899999999995 57999999999999999999
Q ss_pred CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecc---------------------cCCc
Q 009274 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE---------------------EKDW 340 (538)
Q Consensus 282 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---------------------~~~~ 340 (538)
+..+..+..|...|.+++|+|++..++++++.||+|++||+.++........... ....
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 8888888899999999999998888999999999999999987654322211100 0111
Q ss_pred eeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEE------------------Ee---CC-EEEEE
Q 009274 341 RYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLA------------------VC---NG-VLYSG 398 (538)
Q Consensus 341 ~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~------------------~~---~~-~l~s~ 398 (538)
....+....++++.+++++.|+++++||+.+++....+..|...+..+. ++ ++ ++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 1122223347899999999999999999988877666655554443332 22 23 66778
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 452 (538)
+.||+|++||+.+++.......+.. .+.. ++|+|+|++|++++.+| +.+|+
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~-~V~s-vafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGM-PIVD-FCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSS-CEEE-EEECTTSSEEEEEESSE-EEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCC-cEEE-EEEcCCCCEEEEEeCCC-eEEEE
Confidence 8999999999999988877766543 4444 79999999999998776 55554
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=2e-23 Score=210.43 Aligned_cols=259 Identities=15% Similarity=0.158 Sum_probs=202.6
Q ss_pred eeeeccCcceeEEeecCCeEEEEEe--------------ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEE
Q 009274 224 QARAAGGVKDLVNGLSKGNVKFKDL--------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (538)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~l--------------~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~ 287 (538)
.+.+++++..++++..++.+.+|++ .+|.+.|.+++|+ +.++++++.|+.|++||+++++.+..
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence 4556665555566666667777763 3788899999997 88999999999999999999999999
Q ss_pred EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee--------
Q 009274 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-------- 359 (538)
Q Consensus 288 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-------- 359 (538)
+..|...+.+++|+|++..++++++.|+.|++||+.+++.. ...... ......+++++++.+++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~---~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI---RKTDKI---GLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE---EECCCC---SEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE---EEecCC---CCceEEEEcCCCCEEEEEECCCCcccc
Confidence 99999999999999988877788889999999999865432 222221 1234568889999998888
Q ss_pred CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC-EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 009274 360 GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (538)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (538)
.|+.|++||+++++.+..+ .|...+.+++|+ ++ ++++++.|+.|++||+.+++....+... ..+. .++++|++
T Consensus 281 ~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~-~~~~s~dg 356 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPN-TIALSPDG 356 (433)
T ss_dssp CCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEE-EEEECTTS
T ss_pred CCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCC-eEEEcCCC
Confidence 5889999999998877766 356688999998 33 5567789999999999999888777632 3333 47999999
Q ss_pred CEEEEEeC---------------CCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeC-CCeEEEEecCC
Q 009274 437 HTLVVSHE---------------SGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGW-DKTVSVQELAG 493 (538)
Q Consensus 437 ~~l~~~~~---------------dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~-dg~v~iwd~~~ 493 (538)
+++++++. ||.|++||..+ ....+.. ...+.++++ ++++|++++. |+.|++|++++
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 99988876 57999999643 4555554 346777766 8899988875 99999999864
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=4.4e-20 Score=190.47 Aligned_cols=303 Identities=12% Similarity=0.074 Sum_probs=207.5
Q ss_pred cCcceeEEeecCCeEEEEE---------ee-cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeC--CCCceEEEEecCCcC
Q 009274 229 GGVKDLVNGLSKGNVKFKD---------LQ-GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL--KDFSHVHTFKGHDHK 294 (538)
Q Consensus 229 ~~~~~~~~~~~~~~~~i~~---------l~-~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~--~~~~~~~~~~~h~~~ 294 (538)
+++..+++...++.+.+|+ +. +|. +.+++|+ ++++++++.|++|++||+ .+++.+.++.. ...
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~ 223 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIE 223 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCC
Confidence 3444455555555555554 44 333 8899998 899999999999999999 88999988884 456
Q ss_pred eEEEEEec----CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecc-------cCCceeeeEEEEeecCC-EEEEeeCCC
Q 009274 295 VMAVVYVD----EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE-------EKDWRYSGIHALTTSGR-YLYTGSGDR 362 (538)
Q Consensus 295 v~~l~~~~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~l~sg~~dg 362 (538)
+..++|+| ++..++++...+++|.+||..+.+....+..... +.. .......+++++. ++++...++
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~-~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE-PRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESC-CCEEEEEECSSSSEEEEEETTTT
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccC-CceEEEEECCCCCEEEEEECCCC
Confidence 79999999 7776555555699999999887655444332110 011 1122346777665 677778899
Q ss_pred cEEEEECCCCceeE--EecCCCCCeEEEEEe--CCEEEEE-ecCCcEEEEECCCCceeEEEecC---CCCceEEEEEEcC
Q 009274 363 TIKAWSLLDGTLSC--TMSGHKSAVSTLAVC--NGVLYSG-SRDGTIRLWSLSDHSLLTVLEED---SSGAVSSVLSLTA 434 (538)
Q Consensus 363 ~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~ 434 (538)
.|.+||..+.+.+. .+. +...+.+++|+ +++++++ ..+++|.+||..+++++..+... +.+.... .++|
T Consensus 303 ~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--~~~p 379 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--FVHP 379 (543)
T ss_dssp EEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE--EEET
T ss_pred eEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc--cCCC
Confidence 99999998866544 443 56678899999 4456554 56899999999999998888742 2222222 2567
Q ss_pred C-CCEEEEEe-CCCcEEEEeC---------CcceeeeccccceEEEEE--eCCCEEEEEe-------CCCeEEEEecCCC
Q 009274 435 V-QHTLVVSH-ESGSIKVWRN---------DKFMKSMQTHKGSVFAVF--LEGKWLFTGG-------WDKTVSVQELAGD 494 (538)
Q Consensus 435 ~-~~~l~~~~-~dg~i~iwd~---------~~~~~~~~~h~~~v~~~~--~~~~~l~sgs-------~dg~v~iwd~~~~ 494 (538)
+ +..++++. .|++|.+||+ .+.++++..|.+.+..+. +++++|++++ .+++|.+||+.+.
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 6 66666665 5899999995 356788888887766665 4999999987 2779999999988
Q ss_pred eeEeeeecCC-----cccCCCceEEEEEeCCE-EEEE-----ECCCeEEEEEcCC
Q 009274 495 EFEEDVIPTG-----AIPCGSVITALLYWQGK-LFVG-----CADRTVKVYYYGK 538 (538)
Q Consensus 495 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-l~sg-----~~dg~v~vw~~~~ 538 (538)
+......... ......+....+.+++. ++++ +.|+.|.|||..+
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 460 DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 7542221110 00122334444455665 4433 2479999999754
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=1.4e-19 Score=186.70 Aligned_cols=262 Identities=11% Similarity=0.046 Sum_probs=187.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc--cCCCCCcceeeecccCC
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF--SFPLGHEPLKKWNEEKD 339 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~~~~~~ 339 (538)
+..+++++.|++|.+||..+++.+.++..+.. +..++|+|++ +++++++.|++|++||+ .+.+. +.......
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~---~~~i~~g~- 222 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTK---VAEIKIGI- 222 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEE---EEEEECCS-
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcE---EEEEecCC-
Confidence 67788899999999999999999999984433 8999999955 46788888899999999 55432 22222211
Q ss_pred ceeeeEEEEee----cCCEEEEeeC-CCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe--CC-EEEEEec
Q 009274 340 WRYSGIHALTT----SGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC--NG-VLYSGSR 400 (538)
Q Consensus 340 ~~~~~~~~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~--~~-~l~s~s~ 400 (538)
....++++| +|+++++++. +++|.+||..+++++.++..+ ...+.++.++ ++ ++++...
T Consensus 223 --~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 223 --EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp --EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred --CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 123458899 9999988884 899999999999998887642 2368899998 23 7778888
Q ss_pred CCcEEEEECCCCceeE--EEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCC--cceeeecc----ccceEEEE-
Q 009274 401 DGTIRLWSLSDHSLLT--VLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND--KFMKSMQT----HKGSVFAV- 470 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~~~----h~~~v~~~- 470 (538)
++.|.+||+.+.+.+. .+.. ...... +.|+|+++++++++ .+++|.+||.. ++...+.. |.+....+
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~--~~~~~~-~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~ 377 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGA--APFLHD-GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV 377 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEEC--CSSCCC-EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEE
T ss_pred CCeEEEEEecCCCcceeEEecc--CcCccC-ceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccC
Confidence 9999999998876554 3332 222222 68999999877655 58999999954 45555553 65433333
Q ss_pred EeC-CCEEEEEe-CCCeEEEEecCC-------CeeEeeeecCCcccCCCceEEEEEeCCE-EEEEE-------CCCeEEE
Q 009274 471 FLE-GKWLFTGG-WDKTVSVQELAG-------DEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGC-------ADRTVKV 533 (538)
Q Consensus 471 ~~~-~~~l~sgs-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~-------~dg~v~v 533 (538)
.++ +..++++. .|++|.+||+.+ .+........+ .......+.+++. |++++ .+++|.+
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g----~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG----GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC----CCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 455 66677775 589999999987 55554444321 2234444566765 55655 2789999
Q ss_pred EEcCC
Q 009274 534 YYYGK 538 (538)
Q Consensus 534 w~~~~ 538 (538)
||+.+
T Consensus 454 ~d~~~ 458 (543)
T 1nir_A 454 FDLKN 458 (543)
T ss_dssp EETTC
T ss_pred EECCC
Confidence 99864
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2.1e-19 Score=179.77 Aligned_cols=267 Identities=10% Similarity=0.034 Sum_probs=182.5
Q ss_pred EEEEEEc---CCEEEEEe----CCC----cEEEEeC--CCCceE--EEEecCCcCeEEEEEecC--------------CC
Q 009274 255 VTGLAVG---GGFLFSSS----FDK----SIHVWSL--KDFSHV--HTFKGHDHKVMAVVYVDE--------------DQ 305 (538)
Q Consensus 255 V~~l~~~---~~~l~s~s----~dg----~i~iwd~--~~~~~~--~~~~~h~~~v~~l~~~~~--------------~~ 305 (538)
+...+|. .+++++|+ .|| +|++||+ .+++.+ ..+.+|...+..+++.+. +.
T Consensus 65 ~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~ 144 (415)
T 2hqs_A 65 VQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT 144 (415)
T ss_dssp CCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC
T ss_pred cCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 4444444 34566665 467 8999999 899887 558889888877776541 33
Q ss_pred CEEEEEcC--C---CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC---cEEEEECCCCceeEE
Q 009274 306 PLCISGDS--G---GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR---TIKAWSLLDGTLSCT 377 (538)
Q Consensus 306 ~~l~s~~~--d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~ 377 (538)
.+++++.. + +.|++||+... ....+ ..+.. .....+++|+|+.|++++.++ .|++||+.+++.. .
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l---~~~~~--~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~ 217 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDGY-NQFVV---HRSPQ--PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-Q 217 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSC-SCEEE---EEESS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred EEEEEEecCCCCccceEEEEcCCCC-CCEEE---eCCCC--cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-E
Confidence 34333332 2 79999999743 22222 22221 233468999999999999875 9999999998875 4
Q ss_pred ecCCCCCeEEEEEe--CCEEE-EEecCCc--EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeC-CC--cEE
Q 009274 378 MSGHKSAVSTLAVC--NGVLY-SGSRDGT--IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SG--SIK 449 (538)
Q Consensus 378 ~~~h~~~v~~l~~~--~~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg--~i~ 449 (538)
+..|...+.+++|+ ++.|+ +++.|+. |++||+.+++. ..+..+ .... ..++|+|+|+.|++++. ++ .|+
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~-~~~~-~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG-RSNN-TEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC-SSCE-EEEEECTTSSEEEEEECTTSSCEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC-CCcc-cceEECCCCCEEEEEECCCCCcEEE
Confidence 66788899999999 34566 6666655 99999998876 344433 2333 34799999999998886 45 577
Q ss_pred EEeCCc-ceeeeccccceEEEEEe--CCCEEEEEeCC---CeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-E
Q 009274 450 VWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWD---KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-L 522 (538)
Q Consensus 450 iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l~sgs~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 522 (538)
+||... ....+..|...+.++.| +|++|++++.+ ..|++||+.+++...... +.......+.+++. |
T Consensus 295 ~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~------~~~~~~~~~spdg~~l 368 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS------TFLDETPSLAPNGTMV 368 (415)
T ss_dssp EEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC------SSSCEEEEECTTSSEE
T ss_pred EEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC------CCCcCCeEEcCCCCEE
Confidence 778543 34455566677777765 89999988864 589999999887643221 11233444555665 6
Q ss_pred EEEECCC---eEEEEEcC
Q 009274 523 FVGCADR---TVKVYYYG 537 (538)
Q Consensus 523 ~sg~~dg---~v~vw~~~ 537 (538)
++++.++ .|++|++.
T Consensus 369 ~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEEEEETTEEEEEEEETT
T ss_pred EEEEcCCCccEEEEEECC
Confidence 6677666 79999864
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=5.1e-19 Score=171.47 Aligned_cols=262 Identities=11% Similarity=0.034 Sum_probs=186.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCc--CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCc
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH--KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (538)
+++++++.++.|++||+.+++.+..+..... .+..++|+|++..+++++..++.|.+||+.+++....+.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999999888874332 57899999988778888888999999999876543332221100000
Q ss_pred eeeeEEEEeecCCEEEEee------------CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEE
Q 009274 341 RYSGIHALTTSGRYLYTGS------------GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRL 406 (538)
Q Consensus 341 ~~~~~~~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~i 406 (538)
......+++++++++++++ .++.|.+||+.+++.+..+.. ...+.+++|+ +++++++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 0122458899999888886 579999999999888877764 4567888998 4467766 689999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC------------------------cEEEEeCCcc---eee
Q 009274 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG------------------------SIKVWRNDKF---MKS 459 (538)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------------------------~i~iwd~~~~---~~~ 459 (538)
||+.+++....+........ ..++|++..++..+.++ .|.+||.... ...
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 99999988877765431111 26788888666554332 3678886542 122
Q ss_pred eccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEEEEEc
Q 009274 460 MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKVYYY 536 (538)
Q Consensus 460 ~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~vw~~ 536 (538)
+..+...+.++.+ ++++++++ ++.|++||+.+++........ ..+....+.+++ .+++++.++.|++||+
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-----HSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-----SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-----CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 3345555666665 88898888 799999999998766554432 123344455555 4778888999999997
Q ss_pred C
Q 009274 537 G 537 (538)
Q Consensus 537 ~ 537 (538)
.
T Consensus 309 ~ 309 (337)
T 1pby_B 309 E 309 (337)
T ss_dssp T
T ss_pred c
Confidence 5
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=8e-18 Score=164.27 Aligned_cols=270 Identities=10% Similarity=0.044 Sum_probs=192.8
Q ss_pred CcEEEEEEc--CCEEEEEeC-------CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 253 DCVTGLAVG--GGFLFSSSF-------DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+..++++ ++++++++. ++.|.+||..+++.+..+... ..+..++|+|+++.++++...++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 557789998 678877774 568999999999998888754 4478899999888788888889999999998
Q ss_pred CCCCCcceeeecccC----CceeeeEEEEeecCCEEEEee--CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEE
Q 009274 324 FPLGHEPLKKWNEEK----DWRYSGIHALTTSGRYLYTGS--GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVL 395 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l 395 (538)
+++....+....... .........++++++++++++ .++.|.+||..+++.+..+..+...+.+++|+ ++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 765433332211110 000123468899999777766 47899999999999998887666678899998 5689
Q ss_pred EEEecCCcEEEEECCCCceeEEEecCCC--CceEEEEEEcCCCCEEEEEeC-CCcEEEEeCC--cceeeeccccceEEEE
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTVLEEDSS--GAVSSVLSLTAVQHTLVVSHE-SGSIKVWRND--KFMKSMQTHKGSVFAV 470 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~~~h~~~v~~~ 470 (538)
++++.++.|.+||+.+++....+..... ......++++|+++.+++++. ++.|.+||.. +....+......-..+
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 279 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLF 279 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEE
Confidence 9999999999999999998877765221 222334699999998777765 4999999964 3445554444333455
Q ss_pred EeCCCEEEEEe-CCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECC
Q 009274 471 FLEGKWLFTGG-WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCAD 528 (538)
Q Consensus 471 ~~~~~~l~sgs-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~d 528 (538)
++++++++.++ .++.|.+||..+++......... .+....+.+++. ++++..+
T Consensus 280 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 280 NPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred CCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 66888665555 68999999999988766544321 233334445665 5554443
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=3.5e-18 Score=165.36 Aligned_cols=270 Identities=12% Similarity=0.074 Sum_probs=179.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCce
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (538)
+..+++++.++.|++||..+++....+..+...+ .++|+|++..+++++..++.|.+||..++... ........ .
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~--~ 84 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK--VVAIQEGQ--S 84 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE--EEEEEECS--S
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee--EEecccCC--C
Confidence 4557888899999999999999988888777777 99999987767777777999999999876541 12221111 1
Q ss_pred eeeEEEEeecCCEEEEeeCCC---cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEE-EEEecCCc-EEEEECCCCce
Q 009274 342 YSGIHALTTSGRYLYTGSGDR---TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVL-YSGSRDGT-IRLWSLSDHSL 414 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~dg~-i~iwd~~~~~~ 414 (538)
.....++++++++++++..++ .|.+||+.+++.+..+..+ ....+++|+ ++++ +++..++. |.+|++.....
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 122258899999888666553 8999999999988887654 456899999 3344 45556688 99999986443
Q ss_pred eEEE--ecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCC--cc---eeeeccccceEEEEE--eCCCEEEEEe-CC
Q 009274 415 LTVL--EEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND--KF---MKSMQTHKGSVFAVF--LEGKWLFTGG-WD 483 (538)
Q Consensus 415 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~---~~~~~~h~~~v~~~~--~~~~~l~sgs-~d 483 (538)
+... .....+.....++++|+++++++++ .++.|++||.. +. +..+..+ ..+.++. ++|++++.++ .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 164 LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSE
T ss_pred EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCC
Confidence 3211 1001122234479999999665554 68999999954 34 4455443 3344444 4899776655 57
Q ss_pred CeEEEEecCCCeeEeee--ecC---CcccCCCceEEEEEeCCE-EEE-EECCCeEEEEEcCC
Q 009274 484 KTVSVQELAGDEFEEDV--IPT---GAIPCGSVITALLYWQGK-LFV-GCADRTVKVYYYGK 538 (538)
Q Consensus 484 g~v~iwd~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~-l~s-g~~dg~v~vw~~~~ 538 (538)
+.|.+||+.+++..... ... ...+........+.+++. |++ +..++.|.+|++.+
T Consensus 243 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 243 VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 88999999988762221 111 000011111234455654 555 45567999999863
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=1.3e-18 Score=173.91 Aligned_cols=239 Identities=8% Similarity=-0.005 Sum_probs=171.7
Q ss_pred EeecCCCcEEEEEEc----------------CCEEEEEeCC------CcEEEEeCCCCceEEEEecCCcCeEEEEEecCC
Q 009274 247 DLQGHRDCVTGLAVG----------------GGFLFSSSFD------KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDED 304 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~----------------~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 304 (538)
.+.+|...+..++++ +..++.++.+ +.|++||++. .....+..|...+.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCC
Confidence 466676666665554 5677777665 7999999974 5567788899999999999976
Q ss_pred CCEEEEEcCCC---cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEE-EeeCCCc--EEEEECCCCceeEEe
Q 009274 305 QPLCISGDSGG---GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRT--IKAWSLLDGTLSCTM 378 (538)
Q Consensus 305 ~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~--i~iwd~~~~~~~~~~ 378 (538)
. .+++++.++ .|++||+.+++.. ....+.. .....+|+|+|+.|+ +++.|+. |++||+.+++. ..+
T Consensus 191 ~-~la~~s~~~~~~~i~~~d~~tg~~~----~l~~~~~--~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l 262 (415)
T 2hqs_A 191 S-KLAYVTFESGRSALVIQTLANGAVR----QVASFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQV 262 (415)
T ss_dssp S-EEEEEECTTSSCEEEEEETTTCCEE----EEECCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEC
T ss_pred C-EEEEEEecCCCcEEEEEECCCCcEE----EeecCCC--cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeC
Confidence 5 556666664 9999999876432 1222211 233568999999777 6666654 99999988776 567
Q ss_pred cCCCCCeEEEEEe--CCEEEEEec-CC--cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC---CcEEE
Q 009274 379 SGHKSAVSTLAVC--NGVLYSGSR-DG--TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES---GSIKV 450 (538)
Q Consensus 379 ~~h~~~v~~l~~~--~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i 450 (538)
..|...+.+++|+ ++.|++++. ++ .|.+||+.+++.. .+..+ .. ....++|+|+|++|++++.+ ..|++
T Consensus 263 ~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~-~~-~~~~~~~spdG~~l~~~~~~~g~~~i~~ 339 (415)
T 2hqs_A 263 TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWE-GS-QNQDADVSSDGKFMVMVSSNGGQQHIAK 339 (415)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCS-SS-EEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecC-CC-cccCeEECCCCCEEEEEECcCCceEEEE
Confidence 7788899999999 447777775 44 6888899887643 33322 22 33347999999999988764 58999
Q ss_pred EeCCc-ceeeeccccceEEEEEe--CCCEEEEEeCCC---eEEEEecCCCeeEe
Q 009274 451 WRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDK---TVSVQELAGDEFEE 498 (538)
Q Consensus 451 wd~~~-~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg---~v~iwd~~~~~~~~ 498 (538)
||... ....+..|. .+.+++| +|++|++++.++ .|++||+.+.....
T Consensus 340 ~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 340 QDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp EETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred EECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 99653 334455554 6666666 899999988877 79999998766543
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=1.7e-17 Score=161.06 Aligned_cols=264 Identities=13% Similarity=0.185 Sum_probs=165.8
Q ss_pred EEEEEeCCCcEEEEeCC-CC--ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC-CCcceeeecccCC
Q 009274 264 FLFSSSFDKSIHVWSLK-DF--SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL-GHEPLKKWNEEKD 339 (538)
Q Consensus 264 ~l~s~s~dg~i~iwd~~-~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~ 339 (538)
.+++++.|+.|++||++ ++ +.+..+ .|...+.+++|+|++..+++++..++.|.+|++.... ....+.......
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 34455789999999995 33 233333 4777899999999766555555555999999997221 111222222111
Q ss_pred ceeeeEEEEeecCCEEEEeeC-CCcEEEEECC---CCceeEEecCCCCCeEEEEEe--CCEEEEEe-cCCcEEEEECCC-
Q 009274 340 WRYSGIHALTTSGRYLYTGSG-DRTIKAWSLL---DGTLSCTMSGHKSAVSTLAVC--NGVLYSGS-RDGTIRLWSLSD- 411 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~~- 411 (538)
.....+++++++++++++. ++.|.+||+. +.+.+..+..+ ..+.+++|+ ++++++++ .++.|++||+.+
T Consensus 85 --~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 85 --SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp --CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred --CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 2235688999997766654 8899999994 34455555543 458899999 44777777 899999999987
Q ss_pred CceeE----EEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCc----c--eeeec----cc--cceEEEEEe--
Q 009274 412 HSLLT----VLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK----F--MKSMQ----TH--KGSVFAVFL-- 472 (538)
Q Consensus 412 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~----~--~~~~~----~h--~~~v~~~~~-- 472 (538)
++... ......... ...++++|+++++++++ .++.|.+||... . ...+. ++ ...+.++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAG-PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp SCEEEEEEEEEECSTTCC-EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred CceeeecccccccCCCCC-cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 65432 223222223 33478999999776555 789999999642 1 12221 11 123445555
Q ss_pred CCCEEE-EEeCCCeEEEEecC--CCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEE-CCCeEEEEEc
Q 009274 473 EGKWLF-TGGWDKTVSVQELA--GDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGC-ADRTVKVYYY 536 (538)
Q Consensus 473 ~~~~l~-sgs~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~-~dg~v~vw~~ 536 (538)
++++|+ ++..++.|++||+. ++.......... ...+....+.+++. |++++ .++.|.+|++
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT---ETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC---SSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC---CCccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 788777 45578999999998 332222111111 11233344445554 66666 6899999965
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=8.7e-17 Score=156.03 Aligned_cols=243 Identities=13% Similarity=0.147 Sum_probs=163.4
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCC-CcEEEEeCC--CCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFD-KSIHVWSLK--DFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~d-g~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
..|...+.+++|+ ++++++++.+ +.|++|+++ +++ .+..+..+. .+..++|+|++..+++++..++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 3477788899998 8888888876 999999997 554 344555444 7899999998776767777799999999
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEee-CCCcEEEEECCC-CceeE----EecC-CCCCeEEEEEe--C
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLD-GTLSC----TMSG-HKSAVSTLAVC--N 392 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~iwd~~~-~~~~~----~~~~-h~~~v~~l~~~--~ 392 (538)
+..+.............. ....+++++++++++++ .++.|++||+.+ ++... .+.. ....+.+++|+ +
T Consensus 113 ~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDG---CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EETTEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred CCCCccccccccccCCCC---ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 952222222222222111 22457899999888777 899999999987 65432 2222 34578899999 4
Q ss_pred CEEEEE-ecCCcEEEEECCC--Cce--eEEEecCCC----CceEEEEEEcCCCCEEEEEe-CCCcEEEEeCC----c--c
Q 009274 393 GVLYSG-SRDGTIRLWSLSD--HSL--LTVLEEDSS----GAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND----K--F 456 (538)
Q Consensus 393 ~~l~s~-s~dg~i~iwd~~~--~~~--~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~----~--~ 456 (538)
++++++ ..++.|.+||+.. ++. ......... ......++|+|++++++++. .++.|.+||.. + .
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 455544 4889999999954 433 222221111 11233479999998887554 78999999965 1 2
Q ss_pred eeeeccccceEEEEEe--CCCEEEEEe-CCCeEEEEec--CCCee
Q 009274 457 MKSMQTHKGSVFAVFL--EGKWLFTGG-WDKTVSVQEL--AGDEF 496 (538)
Q Consensus 457 ~~~~~~h~~~v~~~~~--~~~~l~sgs-~dg~v~iwd~--~~~~~ 496 (538)
+..+..+.. +.++++ ++++|++++ .++.|.+|++ .+++.
T Consensus 270 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 270 EGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred eeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 233333333 555555 888888887 5899999954 45554
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=8.2e-18 Score=181.46 Aligned_cols=272 Identities=8% Similarity=0.026 Sum_probs=182.0
Q ss_pred CCcEEEEEEc--CCEEEEEeC-CC-----cEEEEeCCCCceEEEEecCCc------------------------CeEEEE
Q 009274 252 RDCVTGLAVG--GGFLFSSSF-DK-----SIHVWSLKDFSHVHTFKGHDH------------------------KVMAVV 299 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~-dg-----~i~iwd~~~~~~~~~~~~h~~------------------------~v~~l~ 299 (538)
...|.+++|+ |++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 4568999999 899999998 88 899999999988777765433 378999
Q ss_pred EecCCCCEEEEEcCCCcEEEEEccCCC--CCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE
Q 009274 300 YVDEDQPLCISGDSGGGIFVWSFSFPL--GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT 377 (538)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 377 (538)
|+|++..+ ++++. +.|++||+.++. ....+. .+. ......+++|||++|++++. +.|++||+.+++....
T Consensus 116 ~SpDg~~l-~~~~~-~~i~~~d~~~~~~~~~~~l~---~~~--~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRL-LFPLG-GELYLYDLKQEGKAAVRQLT---HGE--GFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSSEE-EEEET-TEEEEEESSSCSTTSCCBCC---CSS--SCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred ECCCCCEE-EEEeC-CcEEEEECCCCCcceEEEcc---cCC--cccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 99977655 44444 999999998762 111221 111 12234689999999998875 6899999998877655
Q ss_pred ecCCCCC----------------eEEEEEe--CCEEEEEecCC---------------------------------cEEE
Q 009274 378 MSGHKSA----------------VSTLAVC--NGVLYSGSRDG---------------------------------TIRL 406 (538)
Q Consensus 378 ~~~h~~~----------------v~~l~~~--~~~l~s~s~dg---------------------------------~i~i 406 (538)
...+... +.+++|+ +++|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 5444432 4779999 45788887765 7899
Q ss_pred EECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEeC-----CCcEEEEeCCc--ceeeeccccc----eEEEEE--e
Q 009274 407 WSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-----SGSIKVWRNDK--FMKSMQTHKG----SVFAVF--L 472 (538)
Q Consensus 407 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~--~~~~~~~h~~----~v~~~~--~ 472 (538)
||+.+ ++................++| |||+.|++++. +..|++||..+ ....+..+.. .+.++. +
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99988 776544332112223344689 99999997764 56799999543 3444444432 223444 4
Q ss_pred CCCEEEEEeCCCeEEEEecC-CCeeEeeeecCCcccCCCceEEE-EEeCC-EEE-EEECCC--eEEEEEcC
Q 009274 473 EGKWLFTGGWDKTVSVQELA-GDEFEEDVIPTGAIPCGSVITAL-LYWQG-KLF-VGCADR--TVKVYYYG 537 (538)
Q Consensus 473 ~~~~l~sgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~-sg~~dg--~v~vw~~~ 537 (538)
||+++++++.||.+++|.+. ++. ...+.. . ...+.... +.+++ .++ +++.++ .+++|++.
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~-~---~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTH-G---NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCC-S---SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeee-c---ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 89999999999988888765 222 222211 1 12233333 45566 454 455565 89999863
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=6.5e-17 Score=173.41 Aligned_cols=275 Identities=10% Similarity=0.065 Sum_probs=182.9
Q ss_pred CcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC-----CC
Q 009274 253 DCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-----PL 326 (538)
Q Consensus 253 ~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~ 326 (538)
..|.+++|+ ++.++.+ .|+.|++||+.+++... +..+...+.+++|+|++..+ +++ .|+.|++||+.+ +.
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~l-a~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRV-AYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEE-EEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEE-EEE-ECCeEEEEecCcccccCCC
Confidence 469999999 6555555 46999999999886654 45577788999999977654 443 679999999987 44
Q ss_pred CCcceeeecccC---------CceeeeEEEEeecCCEEEEee---------------------------------CCCcE
Q 009274 327 GHEPLKKWNEEK---------DWRYSGIHALTTSGRYLYTGS---------------------------------GDRTI 364 (538)
Q Consensus 327 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~sg~---------------------------------~dg~i 364 (538)
............ ........+|+|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 322111111100 000023568999999999987 45789
Q ss_pred EEEECCCCceeEEec--CCCCCeEEEEEe--CCEEEEEecCC-----cEEEEECCCCceeEEEe-cCCCCce--EEEEEE
Q 009274 365 KAWSLLDGTLSCTMS--GHKSAVSTLAVC--NGVLYSGSRDG-----TIRLWSLSDHSLLTVLE-EDSSGAV--SSVLSL 432 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~--~h~~~v~~l~~~--~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~-~~~~~~~--~~~~~~ 432 (538)
++||+.+++...... .|...+.+++|+ ++.|++++.++ .|++||+.+++....+. ....... ...+.|
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 999999887655442 467789999999 45788887776 89999999984443332 2222111 122589
Q ss_pred cC--CCCEEEEEeCCCcEEEEeC---CcceeeeccccceEEE-EEe--CCCEEEEEeC-CC----eEEEEecCCCeeEee
Q 009274 433 TA--VQHTLVVSHESGSIKVWRN---DKFMKSMQTHKGSVFA-VFL--EGKWLFTGGW-DK----TVSVQELAGDEFEED 499 (538)
Q Consensus 433 ~~--~~~~l~~~~~dg~i~iwd~---~~~~~~~~~h~~~v~~-~~~--~~~~l~sgs~-dg----~v~iwd~~~~~~~~~ 499 (538)
+| +|+++++++.|+.+++|+. .+....+..|...+.+ +.+ +++.|+.++. ++ .|+.||+.+++....
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred ecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec
Confidence 99 9999999999999999863 3456677777776765 444 8887766554 44 677778777653222
Q ss_pred eecCCcccCCCceEEEEEeCCE-EEEE-ECC---CeEEEEEcC
Q 009274 500 VIPTGAIPCGSVITALLYWQGK-LFVG-CAD---RTVKVYYYG 537 (538)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~-l~sg-~~d---g~v~vw~~~ 537 (538)
.+ ...+....+++++. ++.+ +.+ +.|++|+..
T Consensus 398 -~~-----~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 398 -TP-----ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp -CC-----SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred -cC-----CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 11 12233344455665 5444 333 579999975
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=4.1e-17 Score=175.99 Aligned_cols=306 Identities=8% Similarity=-0.032 Sum_probs=203.5
Q ss_pred ccceeeeeccCcceeEEeec-CC-----eEEEEEeec---------CC------------------------CcEEEEEE
Q 009274 220 ADIDQARAAGGVKDLVNGLS-KG-----NVKFKDLQG---------HR------------------------DCVTGLAV 260 (538)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~-~~-----~~~i~~l~~---------h~------------------------~~V~~l~~ 260 (538)
..+..+.++++++.++.... ++ .+.+|++.+ |. ..|.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 34667788888888888776 66 677776432 21 23788999
Q ss_pred c--CCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecc
Q 009274 261 G--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE 336 (538)
Q Consensus 261 ~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 336 (538)
+ |++|++++. +.|++||+.+++ ....+..|...+.+++|+|++.. ++.++ ++.|++||+.++....... .
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g~~~~~~~---~ 190 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASGRQMQLTA---D 190 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTTEEEECCC---C
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCCCEEEecc---C
Confidence 9 889999886 899999999873 44556778889999999997664 45554 4699999998653221111 1
Q ss_pred cCCce--------------eeeEEEEeecCCEEEEeeCCC---------------------------------cEEEEEC
Q 009274 337 EKDWR--------------YSGIHALTTSGRYLYTGSGDR---------------------------------TIKAWSL 369 (538)
Q Consensus 337 ~~~~~--------------~~~~~~~~~~~~~l~sg~~dg---------------------------------~i~iwd~ 369 (538)
..... .....+|+|||++|++++.|+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 11000 013468999999999988765 8999999
Q ss_pred CC-CceeEEec--CCCCCeEEEEEe-CCEEEEEec-----CCcEEEEECCCCceeEEEecCCCCce--EEEEEEcCCCCE
Q 009274 370 LD-GTLSCTMS--GHKSAVSTLAVC-NGVLYSGSR-----DGTIRLWSLSDHSLLTVLEEDSSGAV--SSVLSLTAVQHT 438 (538)
Q Consensus 370 ~~-~~~~~~~~--~h~~~v~~l~~~-~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 438 (538)
.+ ++...... .|...+.+++|. ++.|++++. +..|++||+.+++....+..+....+ ...+.|+|||++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 88 87655443 477788899984 346776553 56799999999988776655432211 122689999999
Q ss_pred EEEEeCCCcEEEEeC--CcceeeeccccceEEEE---EeCCCEEEE-EeCCC--eEEEEecCC-CeeEeeeecCCcccCC
Q 009274 439 LVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAV---FLEGKWLFT-GGWDK--TVSVQELAG-DEFEEDVIPTGAIPCG 509 (538)
Q Consensus 439 l~~~~~dg~i~iwd~--~~~~~~~~~h~~~v~~~---~~~~~~l~s-gs~dg--~v~iwd~~~-~~~~~~~~~~~~~~~~ 509 (538)
+++++.||.+++|.. ......+..|...+.++ +++++.|+. ++.++ .+++|++.. +.....+.. ..
T Consensus 351 ~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-----~~ 425 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-----AP 425 (741)
T ss_dssp EEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-----SC
T ss_pred EEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-----CC
Confidence 999999998888752 22266777777777654 448887754 44455 899999864 322222221 11
Q ss_pred CceEEEEEeCCE-EEE-EECC---CeEEEEEc
Q 009274 510 SVITALLYWQGK-LFV-GCAD---RTVKVYYY 536 (538)
Q Consensus 510 ~~~~~~~~~~~~-l~s-g~~d---g~v~vw~~ 536 (538)
......+.+++. ++. .+.. +.+.+|+.
T Consensus 426 ~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 426 GMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred CceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 223334445665 443 3332 46777764
No 139
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.78 E-value=3e-20 Score=175.16 Aligned_cols=127 Identities=17% Similarity=0.233 Sum_probs=79.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..+||+ |||+..........+++.+|||.|||||++ ++ ...+.|+.+||||||||+||||+||+
T Consensus 168 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l------~~------~~~~~y~~ksDVwS~Gvvl~Elltg~~ 235 (307)
T 3omv_A 168 GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI------RM------QDNNPFSFQSDVYSYGIVLYELMTGEL 235 (307)
T ss_dssp TEEEEECCCSSCBC------------CCCCTTSCCHHHH------HC------CSSCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeeccCceecccCCcceeecccccCCCccCHHHh------hc------cCCCCCCcHHHhHhHHHHHHHHHHCCC
Confidence 4579999 888877654433345678999999999999 33 11346889999999999999999999
Q ss_pred ccchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.... .+...... . . ..+. +..........+.+++.+||+.+|.+||+..++.+.+..+
T Consensus 236 Pf~~~~~~~~~~~~~~~-~-----~-~~p~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 236 PYSHINNRDQIIFMVGR-G-----Y-ASPD---------LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp TTTTCCCHHHHHHHHHT-T-----C-CCCC---------STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHhc-C-----C-CCCC---------cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 99874332 11100000 0 0 0000 0000111223478899999999999999999988876654
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=4.5e-17 Score=154.27 Aligned_cols=221 Identities=13% Similarity=0.136 Sum_probs=152.4
Q ss_pred EEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC-CCCCcceeeecccCCceeeeE
Q 009274 267 SSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-PLGHEPLKKWNEEKDWRYSGI 345 (538)
Q Consensus 267 s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~ 345 (538)
+++.|++|++||+.+++.. .+..|...|.+++|+|++. ++++++ ++.|++||+.+ +...... ..+. ......
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~---~~~~-~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSPEKVD---TGFA-TICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSCEECC---CTTC-CCBCSC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCceEec---cccc-cccccc
Confidence 3467899999999988766 4556889999999999766 555554 78999999987 5432221 1111 112234
Q ss_pred EEEeecCCEEEEeeC--CC--cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEE-EEecCCcEEEEECCC-CceeEE
Q 009274 346 HALTTSGRYLYTGSG--DR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLY-SGSRDGTIRLWSLSD-HSLLTV 417 (538)
Q Consensus 346 ~~~~~~~~~l~sg~~--dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~-~~~~~~ 417 (538)
.+++|+++++++++. ++ .|..||..+++ ...+..+ ..+.+++|+ ++.++ +++.|+.+++|++.. ......
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 589999999999983 34 44455555554 3444433 348899999 44555 788999999998642 222333
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeC---CcceeeeccccceEEEEEe--CCCEEEEEeCC--------
Q 009274 418 LEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRN---DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWD-------- 483 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~---~~~~~~~~~h~~~v~~~~~--~~~~l~sgs~d-------- 483 (538)
+..+ ...+ ..+.|+|+++.++.++ .++.+++|+. ......+..|...+.++.| ++++|++++.+
T Consensus 168 ~~~~-~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTHG-EGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCCS-SSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred cccC-CCcc-ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 3332 2333 3479999999888766 5899999973 3456677778888887776 89999888876
Q ss_pred ---CeEEEEecCCCeeEe
Q 009274 484 ---KTVSVQELAGDEFEE 498 (538)
Q Consensus 484 ---g~v~iwd~~~~~~~~ 498 (538)
+.|++||+.+++...
T Consensus 246 ~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp SEEEEEEEEETTSCSCEE
T ss_pred cCceEEEEEecCCCCcee
Confidence 569999998876543
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=6.5e-17 Score=169.33 Aligned_cols=259 Identities=13% Similarity=0.090 Sum_probs=174.8
Q ss_pred CCcEEEEEEc--CCEEEEEeC-CCcEEEEeCCCCceEEEEecCC-cCeEEEEEecCCCCEEEEEcC---CCcEEEEEccC
Q 009274 252 RDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDS---GGGIFVWSFSF 324 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~---dg~i~vwd~~~ 324 (538)
..+|.+++|+ |++|++++. ||+++||++++++.. .+..|. ..+.+++|+|+ .++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 4579999998 899999887 999999999666554 445555 68999999986 57777665 56677777654
Q ss_pred --CCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 009274 325 --PLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (538)
Q Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 399 (538)
...... ...... ..+.+++++++ .+++.+.++.+.+||+.+++.......+. .+++|+ ++++++++
T Consensus 98 ~~~g~~~~---l~~~~~---~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 98 SRPGEEQR---LEAVKP---MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp TSTTCCEE---CTTSCS---BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEE
T ss_pred cCCCcccc---ccCCCC---ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEE
Confidence 222221 111111 12558899987 33444444556699999887665554333 788888 66888887
Q ss_pred cC----CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC--cEEEEeCCc--ceeeeccccceEEE--
Q 009274 400 RD----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG--SIKVWRNDK--FMKSMQTHKGSVFA-- 469 (538)
Q Consensus 400 ~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~--~~~~~~~h~~~v~~-- 469 (538)
.| +.|++||+.+++.. .+..+ .+.. ...+|+|||+.|+++..++ .|++||... .. .+..|...+..
T Consensus 169 ~~~~~~~~i~~~d~~~g~~~-~l~~~-~~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGLR-VFDSG-EGSF-SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEETTEEEEEEEETTTCCCE-EECCS-SCEE-EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred EcCCCCeEEEEEcCCCCCce-EeecC-CCcc-ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 77 78999999988765 44333 3333 4479999999999888888 899999543 33 55556544432
Q ss_pred --------EEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCC---eEEEEEc
Q 009274 470 --------VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADR---TVKVYYY 536 (538)
Q Consensus 470 --------~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg---~v~vw~~ 536 (538)
+++||.++++++.|+.+++|++ ++... .. . ..+..+.+.++. +++++.+. .+.+|+.
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~-----~-~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--AP-----Q-GNHGRVVLWRGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CC-----S-SEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cC-----C-CceEEEEecCCEEEEEEcCCCCCCeEEEEcC
Confidence 4458899999999999999999 44332 11 1 234444444776 55566664 3555554
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.76 E-value=4.6e-16 Score=150.39 Aligned_cols=241 Identities=10% Similarity=0.036 Sum_probs=162.4
Q ss_pred EEeecCCCcEEEEEEc--CCEEEEEeC-CCcEEEEeCCCCce-EEEEecCCcCeEEEEEecCCCCEEEEEcCC-C--cEE
Q 009274 246 KDLQGHRDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSH-VHTFKGHDHKVMAVVYVDEDQPLCISGDSG-G--GIF 318 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~~l~s~s~-dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g--~i~ 318 (538)
..+..+...+ +++|+ ++++++++. ++.|.+||+.+++. ...+..+..+..+++|+|++..++ ++..+ + .|.
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~ 111 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecCCCCcccEE
Confidence 3344556667 99998 776666655 89999999999988 777877777776699999766554 55544 3 899
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEE-EeeCCCc-EEEEECCCCcee----EEecCCCCCeEEEEEe-
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRT-IKAWSLLDGTLS----CTMSGHKSAVSTLAVC- 391 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~-i~iwd~~~~~~~----~~~~~h~~~v~~l~~~- 391 (538)
+||+.+++....+ ..... ....+++|++++++ +...++. |.+|++.....+ ...........+++|+
T Consensus 112 v~d~~~~~~~~~~---~~~~~---~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 112 SYSFLKNKFISTI---PIPYD---AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp EEETTTTEEEEEE---ECCTT---EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred EEECCCCCeEEEE---ECCCC---ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 9999865433222 22211 13568899998554 4456688 999998754332 1222344567899999
Q ss_pred -CCEE-EEEecCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCcc----eeeec
Q 009274 392 -NGVL-YSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDKF----MKSMQ 461 (538)
Q Consensus 392 -~~~l-~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~ 461 (538)
++++ +++..++.|.+||+.+++. +..+.... .. ..++++|+|+++++++ .++.|.+||..+. +..+.
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~-~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN--LP-GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS--CC-CCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC--CC-ceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 3445 4455689999999999988 66666432 22 2368999999777665 5788999996532 22221
Q ss_pred cc----cceE-----EEEEeCCCEEEEEeC-CCeEEEEecCCCeeE
Q 009274 462 TH----KGSV-----FAVFLEGKWLFTGGW-DKTVSVQELAGDEFE 497 (538)
Q Consensus 462 ~h----~~~v-----~~~~~~~~~l~sgs~-dg~v~iwd~~~~~~~ 497 (538)
.+ .... .++++++++|++++. ++.|.+||+.+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 263 HGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp CCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred cccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 11 1111 355568988866555 579999999887643
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=5.5e-16 Score=151.05 Aligned_cols=256 Identities=13% Similarity=0.122 Sum_probs=166.3
Q ss_pred CeEEEEEeecCCCcEEEEEEc--CCEEEEEeC---CCcEEEEeCCCCc--eEEEEecCCcCeEEEEEecCCCCEEEEEcC
Q 009274 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSF---DKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDS 313 (538)
Q Consensus 241 ~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 313 (538)
+.........+...+..++|+ ++ +++++. ++.|++||+.+++ .+..+..+...+..++|+|++..++++...
T Consensus 28 g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 28 KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT
T ss_pred CeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC
Confidence 444443444556777889998 55 665554 6899999997765 444555577788999999977766666668
Q ss_pred CCcEEEEEccCCCCCcceeeecccC-------CceeeeEEEEeecCCEEEEeeCCCcEEEEECC-CCceeE--EecCC-C
Q 009274 314 GGGIFVWSFSFPLGHEPLKKWNEEK-------DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL-DGTLSC--TMSGH-K 382 (538)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~-~~~~~~--~~~~h-~ 382 (538)
++.|.+|++........+....... ........+++|+++.+++...++.|++||+. +++... .+..+ .
T Consensus 107 ~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g 186 (347)
T 3hfq_A 107 KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG 186 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT
T ss_pred CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC
Confidence 8999999996433322222221110 00112346889999966666678899999998 554332 22222 3
Q ss_pred CCeEEEEEe--CCEEEE-EecCCcEEEEECCC--Cce--eEEEecCCCC----ceEEEEEEcCCCCEEE-EEeCCCcEEE
Q 009274 383 SAVSTLAVC--NGVLYS-GSRDGTIRLWSLSD--HSL--LTVLEEDSSG----AVSSVLSLTAVQHTLV-VSHESGSIKV 450 (538)
Q Consensus 383 ~~v~~l~~~--~~~l~s-~s~dg~i~iwd~~~--~~~--~~~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~dg~i~i 450 (538)
.....++|+ ++++++ +..++.+.+|++.. ++. +..+...... .....++++|+|++|+ +...++.|.+
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 367889999 444554 56788999999874 443 2223222111 2344479999999874 5566899999
Q ss_pred EeCC-----cceeeeccccceEEEEEe--CCCEEEEEeCC-CeEEEE--ecCCCeeE
Q 009274 451 WRND-----KFMKSMQTHKGSVFAVFL--EGKWLFTGGWD-KTVSVQ--ELAGDEFE 497 (538)
Q Consensus 451 wd~~-----~~~~~~~~h~~~v~~~~~--~~~~l~sgs~d-g~v~iw--d~~~~~~~ 497 (538)
|+.. +.+..+..+...+.++++ +|++|++++.+ +.|.+| |..++++.
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9965 233444444445556655 89988888765 899999 55556554
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=9.4e-16 Score=171.41 Aligned_cols=300 Identities=12% Similarity=0.071 Sum_probs=204.5
Q ss_pred cceeeeeccCcceeEEeecC----C--eEEEEE--------eecCCCcE-------EEEEEc--CCEEEEEeCC------
Q 009274 221 DIDQARAAGGVKDLVNGLSK----G--NVKFKD--------LQGHRDCV-------TGLAVG--GGFLFSSSFD------ 271 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~----~--~~~i~~--------l~~h~~~V-------~~l~~~--~~~l~s~s~d------ 271 (538)
.+....++++++.++..... + .+.+|+ +.+|...+ .+++|+ |+.+++++.+
T Consensus 54 ~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~ 133 (1045)
T 1k32_A 54 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSM 133 (1045)
T ss_dssp EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTC
T ss_pred cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCccc
Confidence 45667777777777765432 3 344443 56788888 899998 7777777754
Q ss_pred CcEEEEeCCCCceE-------------------------------------------------EEEecCCcCeEEEEEec
Q 009274 272 KSIHVWSLKDFSHV-------------------------------------------------HTFKGHDHKVMAVVYVD 302 (538)
Q Consensus 272 g~i~iwd~~~~~~~-------------------------------------------------~~~~~h~~~v~~l~~~~ 302 (538)
..|.+||+.+++.. ..+.+|...+.++.|++
T Consensus 134 ~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~ 213 (1045)
T 1k32_A 134 TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVG 213 (1045)
T ss_dssp CEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEET
T ss_pred ceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeC
Confidence 35777776554321 23346777888899987
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC--
Q 009274 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG-- 380 (538)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-- 380 (538)
+ .++++++.|+.+.+|.+..... .......+.. ....+++|+|+.++++ .++.|++||+... .+..+.+
T Consensus 214 d--~l~~~~~~dg~~~l~~~~~~g~--~~~~l~~~~~---~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~ 284 (1045)
T 1k32_A 214 H--RIYFITDIDGFGQIYSTDLDGK--DLRKHTSFTD---YYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGD 284 (1045)
T ss_dssp T--EEEEEECTTSSCEEEEEETTSC--SCEECCCCCS---SCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCC
T ss_pred C--EEEEEEeccCceEEEEEeCCCC--cceEecCCCC---cceeeEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCc
Confidence 5 6777888899999998764221 1112222221 1245899999988887 4899999999544 3445554
Q ss_pred ---------CCCCeEEEEEe-CC--EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcE
Q 009274 381 ---------HKSAVSTLAVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSI 448 (538)
Q Consensus 381 ---------h~~~v~~l~~~-~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 448 (538)
|...+.+++|+ ++ .+++++ ++.+.+|++.+++... +..+ .......+.|+ +|+.++.++.++.+
T Consensus 285 ~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~s-dg~~l~~~s~~~~l 360 (1045)
T 1k32_A 285 LESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEP-LRIRYVRRGGD-TKVAFIHGTREGDF 360 (1045)
T ss_dssp CCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCC-SCEEEEEECSS-SEEEEEEEETTEEE
T ss_pred ccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCC-CcceEEeeeEc-CCCeEEEEECCCce
Confidence 33468999998 54 677766 8899999998876543 3332 33133346889 99999999988888
Q ss_pred E-EEeCCc-ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EE
Q 009274 449 K-VWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LF 523 (538)
Q Consensus 449 ~-iwd~~~-~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 523 (538)
. +||... ....+..|...+.++.| ||++|++++.++.|++||+.+++........ ...+....+++|+. |+
T Consensus 361 ~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~----~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 361 LGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR----EAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS----SSCCCCEEECTTSCEEE
T ss_pred EEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC----CCCccceEECCCCCeEE
Confidence 8 888543 33445577777887776 9999999999999999999988765554221 12223444566776 66
Q ss_pred EEECC----------CeEEEEEcC
Q 009274 524 VGCAD----------RTVKVYYYG 537 (538)
Q Consensus 524 sg~~d----------g~v~vw~~~ 537 (538)
+++.+ +.|++||+.
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEecCccccccCCCCCeEEEEECC
Confidence 66554 499999975
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=2e-15 Score=147.20 Aligned_cols=222 Identities=17% Similarity=0.169 Sum_probs=161.6
Q ss_pred CcEEEEEEc--CCEE-EEEeCCCcEEEEeCCCCceEEEEecCCcC---------eEEEEEecCCCCEEEEE-cCCCcEEE
Q 009274 253 DCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHK---------VMAVVYVDEDQPLCISG-DSGGGIFV 319 (538)
Q Consensus 253 ~~V~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~l~s~-~~dg~i~v 319 (538)
..+.+++++ ++++ ++...++.|.+||..+++.+..+..+... +.+++|+|+++.+++++ +.++.|.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 346678887 6644 55566899999999999998888765432 78999999877666666 46889999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC----CCCCeEEEEEe--CC
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG----HKSAVSTLAVC--NG 393 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~l~~~--~~ 393 (538)
||..+.+....+... .. .....+++++++++++++.++.|.+||..+++.+..+.. +...+.+++|+ ++
T Consensus 169 ~d~~~~~~~~~~~~~--~~---~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNT--GK---MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp EETTTTEEEEEECCC--CT---TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred EcCCCCceEEEecCC--CC---ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 999865433322211 11 112358899999999999999999999999998877754 55678889999 45
Q ss_pred EEEEEe-cCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCC--cceeeeccccceEEE
Q 009274 394 VLYSGS-RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND--KFMKSMQTHKGSVFA 469 (538)
Q Consensus 394 ~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (538)
++++++ .++.|.+||+.+++.+..+..... . .+.++|+++++++++ .++.|.+||.. +.+..+... ....+
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~ 318 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPES---L-AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNS 318 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSC---C-CEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---c-eEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCe
Confidence 566555 459999999999998888875432 2 268999999766655 68999999965 344444443 34566
Q ss_pred EEe--CCCEEEEEeCCC
Q 009274 470 VFL--EGKWLFTGGWDK 484 (538)
Q Consensus 470 ~~~--~~~~l~sgs~dg 484 (538)
+.+ +|++|+.+..++
T Consensus 319 ~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 319 LALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEECTTSCEEEEEEECC
T ss_pred EEEcCCCCEEEEEEccc
Confidence 665 888777766553
No 146
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.75 E-value=5.3e-19 Score=169.10 Aligned_cols=123 Identities=16% Similarity=0.154 Sum_probs=79.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+||+ |||+.+...+.....+..+||+.|||||++ ++ ..++.++|||||||+||||+| |+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~------~~---------~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI------LY---------RKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhh------cC---------CCCCccccccchHHHHHHHHcCCC
Confidence 4579999 888887665544445678999999999999 44 678999999999999999999 89
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.+...+.. .+..-..... ......+.+++.+||+.+|.+||+..++.+.+..+
T Consensus 259 ~Pf~~~~~~~~~~---------------------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 259 QPWYQLSNTEAID---------------------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp CTTCSSCHHHHHH---------------------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHH---------------------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 998754442110 0000000001 12233488899999999999999999999988887
Q ss_pred hcCC
Q 009274 166 IIKP 169 (538)
Q Consensus 166 ~~~~ 169 (538)
.+.|
T Consensus 318 ~~~p 321 (329)
T 4aoj_A 318 AQAP 321 (329)
T ss_dssp HHSC
T ss_pred hhCC
Confidence 7544
No 147
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.75 E-value=2.3e-19 Score=168.72 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=80.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+.+.......++++|||.|||||++ +| ..|++++|||||||+||+|+||+
T Consensus 168 ~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl------~~---------~~y~~~~DiWSlGvilyeml~G~~ 232 (311)
T 4aw0_A 168 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL------TE---------KSACKSSDLWALGCIIYQLVAGLP 232 (311)
T ss_dssp TSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHH------HH---------SCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHH------cC---------CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4567999 888888655443346679999999999999 33 45789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
||.+.+...+.....+ ..+.. ......++.+++.+||.++|.+||++.++.
T Consensus 233 PF~~~~~~~~~~~i~~---------~~~~~------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 233 PFRAGNEGLIFAKIIK---------LEYDF------------PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp SSCCSSHHHHHHHHHH---------TCCCC------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCCCHHHHHHHHHc---------CCCCC------------CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 9988655532200000 00000 001122477899999999999999988754
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=2.8e-16 Score=152.95 Aligned_cols=239 Identities=12% Similarity=0.107 Sum_probs=166.2
Q ss_pred EEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCC-cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeee
Q 009274 258 LAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW 334 (538)
Q Consensus 258 l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 334 (538)
++++ +.++++++.+++|++||+.+++.+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++....+...
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 3444 6788999999999999999999988887553 257889999988767778888999999999865433222211
Q ss_pred ccc-CCceeeeEEEEeecCCEEEEeeCC------------CcEEEEECCCCce---eEEecCCCCCeEEEEEe-CCEEEE
Q 009274 335 NEE-KDWRYSGIHALTTSGRYLYTGSGD------------RTIKAWSLLDGTL---SCTMSGHKSAVSTLAVC-NGVLYS 397 (538)
Q Consensus 335 ~~~-~~~~~~~~~~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~-~~~l~s 397 (538)
... .........+++|+++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+ ++.+++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEE
Confidence 000 000112345899999999988865 8999999988543 33444 34468899998 333666
Q ss_pred EecCCcEEEEECCCCceeEEEecCCCC-----------------------------------------------------
Q 009274 398 GSRDGTIRLWSLSDHSLLTVLEEDSSG----------------------------------------------------- 424 (538)
Q Consensus 398 ~s~dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------------------------- 424 (538)
++ +.|.+||+.+++....+......
T Consensus 164 ~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 54 34999999999877766533100
Q ss_pred -------------ceEEEEEEcC-CCCEEEEEeCCCcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCCCeE
Q 009274 425 -------------AVSSVLSLTA-VQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTV 486 (538)
Q Consensus 425 -------------~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v 486 (538)
.....++++| ++++++++ ++.|.+||..+ ....+... ..+.++.+ ++++|++++.++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 242 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEE
T ss_pred CCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeE
Confidence 0112246679 99999888 88999999654 33444322 23345554 88888888889999
Q ss_pred EEEecCCCeeEeeeec
Q 009274 487 SVQELAGDEFEEDVIP 502 (538)
Q Consensus 487 ~iwd~~~~~~~~~~~~ 502 (538)
++||+.+.+.......
T Consensus 319 ~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 319 AVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEeccccceeeeeec
Confidence 9999999886655443
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=1.9e-16 Score=158.92 Aligned_cols=200 Identities=13% Similarity=0.112 Sum_probs=140.3
Q ss_pred CCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCC----------ceEEE-----EecCCcCeEEEEEecCCCCEEE---EE
Q 009274 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----------SHVHT-----FKGHDHKVMAVVYVDEDQPLCI---SG 311 (538)
Q Consensus 252 ~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~----------~~~~~-----~~~h~~~v~~l~~~~~~~~~l~---s~ 311 (538)
...++.++++ +.++++++.|+ +++|+..+. ..+.. .-.+...|.+++|+|++..+++ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4457888888 88999999887 888874210 01111 1135678999999997664443 88
Q ss_pred cCCCcEEEEEccCC-----CCCcc---eeeecccCCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEecCCC
Q 009274 312 DSGGGIFVWSFSFP-----LGHEP---LKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK 382 (538)
Q Consensus 312 ~~dg~i~vwd~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~ 382 (538)
+.|+.|++||+.+. ..... +.....+. .....++|+|+ +++|++++.||+|++||++++..+....+|.
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG--GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG--GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCC--CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 99999999999764 11111 22222222 22334577887 7799999999999999999987777777899
Q ss_pred CCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEE-eCCCc------E
Q 009274 383 SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVS-HESGS------I 448 (538)
Q Consensus 383 ~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~-~~dg~------i 448 (538)
..|++++|+ +++|++|+.||+|++||++ ++....+..+.. ......+.|++++.++++. ..||. +
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 999999999 5699999999999999998 665555543321 1133446888887776543 34433 8
Q ss_pred EEEeCCc
Q 009274 449 KVWRNDK 455 (538)
Q Consensus 449 ~iwd~~~ 455 (538)
++|++.+
T Consensus 272 ~i~~l~~ 278 (434)
T 2oit_A 272 VMALLPK 278 (434)
T ss_dssp EEEECCC
T ss_pred EEEEecc
Confidence 8999653
No 150
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.74 E-value=1.4e-19 Score=172.31 Aligned_cols=121 Identities=14% Similarity=0.102 Sum_probs=81.0
Q ss_pred eeeec--cccccccccchhh---hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 13 VAKVG--CVGSRICDKEVGL---FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
.+|+. |+|+.+.+..... ....++|||.|||||++ +| ..|++++|||||||+|||||||+
T Consensus 189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGvilyemltG~ 253 (336)
T 4g3f_A 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV------MG---------KPCDAKVDIWSSCCMMLHMLNGC 253 (336)
T ss_dssp CEEECCCTTCEEC------------CCCCCCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCc
Confidence 37999 8888876543211 12347899999999999 55 56889999999999999999999
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.+...+... +........ ...+.....+.+++.+||+++|.+||++.++.+.+...+
T Consensus 254 ~Pf~~~~~~~~~~~----------i~~~~~~~~--------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 254 HPWTQYFRGPLCLK----------IASEPPPIR--------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp CSSTTTCCSCCHHH----------HHHSCCGGG--------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHH----------HHcCCCCch--------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 9987654422200 000000000 001112234788999999999999999999888776654
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=3.2e-16 Score=175.20 Aligned_cols=274 Identities=10% Similarity=0.059 Sum_probs=193.4
Q ss_pred EEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCC-CceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 246 KDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
..+.+|...+.++.|+ +.++++++.|++++||.+.. +.....+..|. .+...+|+|++..+++ + .++.|++||+.
T Consensus 197 ~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~-~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILF-S-KGGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEE-E-ETTEEEEECTT
T ss_pred EECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEE-E-eCCEEEEecCC
Confidence 4458999999999999 54556777889999998753 44555666565 4667799998776644 4 48999999983
Q ss_pred CCCCCcceeeecccC---------CceeeeEEEEe-ecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-CeEEEEEe-
Q 009274 324 FPLGHEPLKKWNEEK---------DWRYSGIHALT-TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-AVSTLAVC- 391 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~~- 391 (538)
.. .+....... ........+++ |+|+.+++++ ++.|++|++.+++.. .+..|.. .+.+++|+
T Consensus 274 ~~----~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~sd 347 (1045)
T 1k32_A 274 TE----KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGDT 347 (1045)
T ss_dssp TC----CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSSS
T ss_pred ce----EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEcC
Confidence 22 121211110 00112356899 9999888887 789999999877654 4566777 89999998
Q ss_pred CCEEEEEecCCcEE-EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceeeeccccceEE
Q 009274 392 NGVLYSGSRDGTIR-LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVF 468 (538)
Q Consensus 392 ~~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~ 468 (538)
++.+++++.++.+. +||+.+++... +. .+...+ ..++|+|||++|++++.++.|++||.. +.......|...+.
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~~~~~-~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~ 424 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAEK-FE-ENLGNV-FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 424 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEE-CC-CCCCSE-EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC
T ss_pred CCeEEEEECCCceEEEEECCCCCceE-ec-CCccce-eeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCcc
Confidence 33788888888888 99998776543 33 333333 347999999999999999999999964 34445557888877
Q ss_pred EEEe--CCCEEEEEeCCC----------eEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEE
Q 009274 469 AVFL--EGKWLFTGGWDK----------TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYY 535 (538)
Q Consensus 469 ~~~~--~~~~l~sgs~dg----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~ 535 (538)
+++| ||++|++++.++ .|++||+.+++......+ ........+.+++. |++++.++...+|+
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~-----~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE-----NSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS-----SSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC-----CcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 7765 999999887754 899999998874332221 11223344556665 77788888777776
Q ss_pred c
Q 009274 536 Y 536 (538)
Q Consensus 536 ~ 536 (538)
.
T Consensus 500 ~ 500 (1045)
T 1k32_A 500 R 500 (1045)
T ss_dssp S
T ss_pred h
Confidence 3
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=2.7e-16 Score=148.84 Aligned_cols=229 Identities=12% Similarity=0.095 Sum_probs=161.0
Q ss_pred EeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCC-CceEEEEecC-CcCeEEEEEecCCCCEEEEEc--CCCcEEEE
Q 009274 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGH-DHKVMAVVYVDEDQPLCISGD--SGGGIFVW 320 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~--~dg~i~vw 320 (538)
.+..|...|.+++|+ +++|++++ ++.|++||+.+ ++.......| ...+.+++|+|++. ++++++ .++...+|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-EEEEEEeCCCCcceEE
Confidence 456688999999999 88888887 88999999999 8877766666 37789999999765 555555 44566777
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEE-EeeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEe--CCEEE
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC--NGVLY 396 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l~ 396 (538)
.++..... ......... ....+++|+++.++ +++.|+.+++|+++. +.....+..|...+.+++|+ ++.++
T Consensus 114 ~~~~~~~~--~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 114 LLPSTGGT--PRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp EEETTCCC--CEECCSSSS---EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEE
T ss_pred EEECCCCc--eEEeecCCC---ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEE
Confidence 66432211 122222211 23458899999776 788899999998632 33445666788899999999 44666
Q ss_pred EEe-cCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC-----------CcEEEEeCCc--c--eee
Q 009274 397 SGS-RDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES-----------GSIKVWRNDK--F--MKS 459 (538)
Q Consensus 397 s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~--~--~~~ 459 (538)
.++ .++.+++|++. .+.....+..+. .....+.|+|++++|++++.+ +.|++||... . +..
T Consensus 189 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 189 FNSSRTGQMQIWRVRVDGSSVERITDSA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEECTTSSCEEEEEETTSSCEEECCCCS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred EEecCCCCccEEEECCCCCCcEEEecCC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 555 59999999986 455555554432 233447899999999988766 5699999643 2 333
Q ss_pred eccccceEEEEEe--CCCEEEEEeCCC
Q 009274 460 MQTHKGSVFAVFL--EGKWLFTGGWDK 484 (538)
Q Consensus 460 ~~~h~~~v~~~~~--~~~~l~sgs~dg 484 (538)
+..|...+.++.| ++++|++++.|.
T Consensus 267 ~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCcccccceECCCCCEEEEEEecc
Confidence 4467777776665 889888887654
No 153
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.74 E-value=3.2e-19 Score=170.67 Aligned_cols=113 Identities=16% Similarity=0.275 Sum_probs=81.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+.+... ..++++|||.|||||++ +| ..|+.++|||||||+||||+||+
T Consensus 161 ~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l------~~---------~~y~~~~DiwSlGvilyemltG~~ 223 (350)
T 4b9d_A 161 DGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEIC------EN---------KPYNNKSDIWALGCVLYELCTLKH 223 (350)
T ss_dssp TCCEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEcccccceeecCCcc--cccccCCCccccCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3568999 88888875432 25679999999999999 55 56889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+...+.... ....++ ........++.+++.+||+++|.+||++.++.+
T Consensus 224 PF~~~~~~~~~~~i---------~~~~~~-----------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 224 AFEAGSMKNLVLKI---------ISGSFP-----------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SCCCSSHHHHHHHH---------HHTCCC-----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcCHHHHHHHH---------HcCCCC-----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 99987555222000 000000 000111234788999999999999999888765
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=3.5e-16 Score=156.96 Aligned_cols=185 Identities=12% Similarity=0.060 Sum_probs=135.1
Q ss_pred cceeeeeccCcceeEEeecCCeEEEEEe------------------------ecCCCcEEEEEEc--CCEEE----EEeC
Q 009274 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL------------------------QGHRDCVTGLAVG--GGFLF----SSSF 270 (538)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l------------------------~~h~~~V~~l~~~--~~~l~----s~s~ 270 (538)
..+...+++....++.+..++ +.++.. ..|...|++++|+ +++|+ +|+.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 355666777777777777665 555431 1245679999999 88998 8899
Q ss_pred CCcEEEEeCCCC--------ce---EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCC
Q 009274 271 DKSIHVWSLKDF--------SH---VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD 339 (538)
Q Consensus 271 dg~i~iwd~~~~--------~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 339 (538)
|++|++||+.++ +. +..+.+|...|.+++|+|+++.++++++.||+|++||++++.. ......+.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---~~~~~~~~- 192 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---VCATLPST- 192 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---EEEEECGG-
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---eeeccCCC-
Confidence 999999998654 22 4556679999999999998788999999999999999987522 11111111
Q ss_pred ceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC-------CCeEEEEEe-CCEEE--EEecCC------c
Q 009274 340 WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-------SAVSTLAVC-NGVLY--SGSRDG------T 403 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~~-~~~l~--s~s~dg------~ 403 (538)
......+|+++|++|++|+.||.|++||++ ++....+..|. ..|.+++|+ +..++ .++.|| .
T Consensus 193 -~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 193 -VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp -GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred -CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 223456889999999999999999999998 66666554432 378999999 44333 233443 3
Q ss_pred EEEEECCCC
Q 009274 404 IRLWSLSDH 412 (538)
Q Consensus 404 i~iwd~~~~ 412 (538)
+++||++..
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999865
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=3.6e-16 Score=168.07 Aligned_cols=243 Identities=10% Similarity=0.021 Sum_probs=162.2
Q ss_pred eecCCC---cEEEEEEc--CCEEEEEeCC---------CcEEEEeCCCCceEEEEe---cCCcCeEEEEEecCCCCEEEE
Q 009274 248 LQGHRD---CVTGLAVG--GGFLFSSSFD---------KSIHVWSLKDFSHVHTFK---GHDHKVMAVVYVDEDQPLCIS 310 (538)
Q Consensus 248 l~~h~~---~V~~l~~~--~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~s 310 (538)
+.+|.. .|.+++|+ |++|++++.+ +.+.+||+.+++. ..+. .|...+..++|+|++..+++
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~- 130 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIF- 130 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEE-
T ss_pred eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEE-
Confidence 445554 49999999 8999999875 7788999998876 3343 34445889999998776644
Q ss_pred EcCCCcEEEEEccCCCCCcceeeecccC------C-------ceeeeEEEEeecCCEEEEeeCCC---------------
Q 009274 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEK------D-------WRYSGIHALTTSGRYLYTGSGDR--------------- 362 (538)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~l~sg~~dg--------------- 362 (538)
++. +.|++||+.++............. . .......+|+|||+.|++++.|+
T Consensus 131 ~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~ 209 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI 209 (723)
T ss_dssp EET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS
T ss_pred EEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC
Confidence 443 799999998754322211100000 0 00113468999999999887653
Q ss_pred -------------------cEEEEECCCCceeEEecCC------CCCeEEEEEe-CC-EEEEEec----CCcEEEEECCC
Q 009274 363 -------------------TIKAWSLLDGTLSCTMSGH------KSAVSTLAVC-NG-VLYSGSR----DGTIRLWSLSD 411 (538)
Q Consensus 363 -------------------~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~-~~-~l~s~s~----dg~i~iwd~~~ 411 (538)
.|++||+.+++....+..+ ...+.+++|+ ++ ++++.+. +..|++||+.+
T Consensus 210 ~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp SCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred CCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 7999999988866666554 5678999999 44 5555543 35799999999
Q ss_pred CceeEEEecCCCCceE---EEEEEcCCCCEEEE--EeCCC------cEEEEe-CC-cc---eeeeccccceEE---EEEe
Q 009274 412 HSLLTVLEEDSSGAVS---SVLSLTAVQHTLVV--SHESG------SIKVWR-ND-KF---MKSMQTHKGSVF---AVFL 472 (538)
Q Consensus 412 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~--~~~dg------~i~iwd-~~-~~---~~~~~~h~~~v~---~~~~ 472 (538)
++....+..++.+.+. ....|+|||+.|+. +..++ .|.+|| .. .. ...+..+...+. ++++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 9877665543333221 13589999997765 45666 577777 22 23 445543333333 4455
Q ss_pred CCCEEEEEeCC---CeEEEEecCC
Q 009274 473 EGKWLFTGGWD---KTVSVQELAG 493 (538)
Q Consensus 473 ~~~~l~sgs~d---g~v~iwd~~~ 493 (538)
+|+.|+..+.+ +.+++|++..
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECS
T ss_pred CCCEEEEEEcCCCCcceEEEEEeC
Confidence 99998776655 7899999864
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=2e-14 Score=140.84 Aligned_cols=244 Identities=16% Similarity=0.154 Sum_probs=156.5
Q ss_pred CCCcEEEEEEc--CCEEEEEeCC----CcEEEEeCCC--Cce--EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFD----KSIHVWSLKD--FSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~d----g~i~iwd~~~--~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
|...+..++|+ +++|++++.+ +.|.+|+++. ++. +.....+......+++ ++..++++...++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56667778998 8889999886 7999998865 433 3444445666777777 455565666678999999
Q ss_pred EccCCCCCcceeeecccCC---------ceeeeEEEEeecCCEEEEee-CCCcEEEEECCCCc-------ee------EE
Q 009274 321 SFSFPLGHEPLKKWNEEKD---------WRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLDGT-------LS------CT 377 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~-------~~------~~ 377 (538)
++................. .......+++|+++++++++ .++.|++|++.... .. ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9975443322221111000 01113468999999665554 58899999887543 11 11
Q ss_pred ecCCCCCeEEEEEe--CCEEEEEe-cCCcEEEEECCCCce--eEEEecCCC-CceEEEEEEcCCCCEEEEEeCC--CcEE
Q 009274 378 MSGHKSAVSTLAVC--NGVLYSGS-RDGTIRLWSLSDHSL--LTVLEEDSS-GAVSSVLSLTAVQHTLVVSHES--GSIK 449 (538)
Q Consensus 378 ~~~h~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d--g~i~ 449 (538)
...+......++|+ ++++++++ .++.|.+||+.+++. +..+..... ......++|+|+|++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 22345567899999 44676666 689999999987754 222322111 1122347999999998777654 8999
Q ss_pred EEeCC----c--ceeeeccccceEEEEE--eCCCEEEEEe-CCCeEEEEec--CCCeeE
Q 009274 450 VWRND----K--FMKSMQTHKGSVFAVF--LEGKWLFTGG-WDKTVSVQEL--AGDEFE 497 (538)
Q Consensus 450 iwd~~----~--~~~~~~~h~~~v~~~~--~~~~~l~sgs-~dg~v~iwd~--~~~~~~ 497 (538)
+|+.. + .+..+.. ...+.+++ ++|++|++++ .++.|.+|++ .++++.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 99864 2 2222222 23344555 4899888888 5789999654 466543
No 157
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.73 E-value=7e-19 Score=165.88 Aligned_cols=120 Identities=13% Similarity=0.256 Sum_probs=86.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|++ |+|+.....+........+||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 164 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~------~~---------~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 164 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI------MY---------RKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCcEEECCcccceecCCCCceeecCceecChhhcCHHHH------cC---------CCCCchhhHHHHHHHHHHHHcCCC
Confidence 4579999 888877665544334567899999999999 33 568899999999999999999 89
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.+...+. .+. + +..+ ........++.+++.+||+.+|.+||+..++...+.++
T Consensus 229 ~Pf~~~~~~~~~~~i~-~----------------~~~~----~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 229 QPWYQLSNNEVIECIT-Q----------------GRVL----QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp CTTTTSCHHHHHHHHH-H----------------TCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH-c----------------CCCC----CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99886544222 000 0 0000 00011223488899999999999999999998887776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 288 ~ 288 (299)
T 4asz_A 288 A 288 (299)
T ss_dssp H
T ss_pred H
Confidence 4
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=2.7e-16 Score=168.63 Aligned_cols=266 Identities=9% Similarity=0.047 Sum_probs=166.9
Q ss_pred EEEEEEcCCEEEEEeCCCcEEEEeCCCCceE-EEEecCC-----------------cCeEEEEEecCCCCEEEEEcCCCc
Q 009274 255 VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHV-HTFKGHD-----------------HKVMAVVYVDEDQPLCISGDSGGG 316 (538)
Q Consensus 255 V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~h~-----------------~~v~~l~~~~~~~~~l~s~~~dg~ 316 (538)
+..+.|.++.+++++.|+ | +||+.+++.+ ..+..|. ..|.+++|+|+ +.++++ .++.
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~--~~~~ 102 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF--TQGG 102 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE--ETTE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE--ECCE
Confidence 344556678888888888 8 9999999873 4443332 46999999997 655555 3599
Q ss_pred EEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC-----CceeEEecCCCCC-------
Q 009274 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-----GTLSCTMSGHKSA------- 384 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~-----~~~~~~~~~h~~~------- 384 (538)
|++||+.++.... ...... .....+++|||+.|+++ .|+.|++||+.+ ++.......+...
T Consensus 103 i~~~d~~~~~~~~----l~~~~~--~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 103 LVGFDMLARKVTY----LFDTNE--ETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp EEEEETTTTEEEE----EECCTT--CCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred EEEEECCCCceEE----ccCCcc--cccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 9999997653211 111111 11234899999999885 679999999998 7766554444433
Q ss_pred -------eEEEEEe--CCEEEEEe---------------------------------cCCcEEEEECCCCceeEEEecCC
Q 009274 385 -------VSTLAVC--NGVLYSGS---------------------------------RDGTIRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 385 -------v~~l~~~--~~~l~s~s---------------------------------~dg~i~iwd~~~~~~~~~~~~~~ 422 (538)
+.+++|+ +++|++++ .+..|++||+.+++.........
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 4789999 45888887 44679999999887654433221
Q ss_pred CCceEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCcc--eeeec--cccce---E--EEEEe--CCCEEEEEeCCCeE
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHESG-----SIKVWRNDKF--MKSMQ--THKGS---V--FAVFL--EGKWLFTGGWDKTV 486 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~--~h~~~---v--~~~~~--~~~~l~sgs~dg~v 486 (538)
.......+.|+|||+.|++++.++ .|++||..+. ...+. .+... + ..+++ +|+++++++.||.+
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 223344479999999999988775 8999996542 33332 12221 1 24566 88999999999999
Q ss_pred EEEecC-CCeeEeeeecCCcccCCCceEEE-EEeCC-EEEE-EECCC----eEEEEEc
Q 009274 487 SVQELA-GDEFEEDVIPTGAIPCGSVITAL-LYWQG-KLFV-GCADR----TVKVYYY 536 (538)
Q Consensus 487 ~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~s-g~~dg----~v~vw~~ 536 (538)
++|++. ++........ + ...+...+ +.+++ .|+. ++.++ .|..|++
T Consensus 336 ~l~~~~~~~~~~~~l~~-~---~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTK-G---EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEEEETTSCEEEECCC-S---SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEEEEECCCCEEEecCC-C---CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 999875 3333222221 1 11222323 44455 4554 44554 5666664
No 159
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.73 E-value=3.7e-19 Score=166.49 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=75.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|++ |+|+..... ..++++|||.|||||++ . ++|++++|||||||+||||+||+ |
T Consensus 169 g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~------~----------~~y~~~~DiwSlGvilyelltg~~P 228 (290)
T 3fpq_A 169 GSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMY------E----------EKYDESVDVYAFGMCMLEMATSEYP 228 (290)
T ss_dssp SCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGG------G----------TCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEeCcCCEeCCCC----ccCCcccCccccCHHHc------C----------CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 568999 888754432 25579999999999988 2 35889999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.... .+.... . ....+. .......+.+.+++.+||.++|.+||++.++.+
T Consensus 229 f~~~~~~~~~~~~i-~-------~~~~~~-----------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 229 YSECQNAAQIYRRV-T-------SGVKPA-----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTTCSSHHHHHHHH-T-------TTCCCG-----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCcHHHHHHHH-H-------cCCCCC-----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 9764222 111000 0 000000 001112234788999999999999999877654
No 160
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.73 E-value=9.7e-19 Score=165.63 Aligned_cols=118 Identities=14% Similarity=0.179 Sum_probs=86.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+||+ ||||.+...+.....++.+||+.|||||++ .+ +.++.+||||||||+||||+| |+
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l------~~---------~~~s~ksDVwSfGvvl~El~t~g~ 245 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI------MY---------GKFSIDSDIWSYGVVLWEVFSYGL 245 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHH------hC---------CCCCccchhhhHHHHHHHHHhCCC
Confidence 4579999 888888766554446678999999999999 33 678899999999999999999 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.+.+...+. .+. .. ..++ ........+.+++.+|++.+|.+||+..++.+.|+.
T Consensus 246 ~Pf~~~~~~~~~~~i~--~~-------~~~~------------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 246 QPYCGYSNQDVVEMIR--NR-------QVLP------------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CTTTTCCHHHHHHHHH--TT-------CCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHH--cC-------CCCC------------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 99886544222 000 00 0000 001122347889999999999999999999887764
No 161
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.73 E-value=1.1e-18 Score=161.69 Aligned_cols=111 Identities=23% Similarity=0.292 Sum_probs=68.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+...+... .++.+|||.|||||++ .| ...+++++|||||||+||+|+||+
T Consensus 148 ~~~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~------~~--------~~y~~~~~DiwSlGvily~lltg~~ 210 (275)
T 3hyh_A 148 HLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVI------SG--------KLYAGPEVDVWSCGVILYVMLCRRL 210 (275)
T ss_dssp TCCEEECCSSCC------------------CTTSCHHHH------SS--------SSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEeecCCCeecCCCCc---cCCeeECcccCChhhh------cC--------CCCCCChhhhHHHHHHHHHHHHCCC
Confidence 3568998 78887765542 5679999999999999 44 123468999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+...+. .+. ...+. . .......+.+++.+||+.+|.+||++.++.+
T Consensus 211 PF~~~~~~~~~~~i~----------~~~~~--------~----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 211 PFDDESIPVLFKNIS----------NGVYT--------L----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SSCCSSHHHHHHHHH----------HTCCC--------C----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHH----------cCCCC--------C----CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 99876554222 000 00000 0 0011224788999999999999999888765
No 162
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.72 E-value=1.7e-18 Score=166.95 Aligned_cols=122 Identities=16% Similarity=0.203 Sum_probs=87.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+||+ |+||.+.........++.+||+.|||||++ .+ ..++.+||||||||+||||+| |+
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l------~~---------~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI------FD---------RVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHH------hc---------CCCCCcccEeehHHHHHHHHhCCC
Confidence 4689999 889887655443335578999999999999 33 568899999999999999998 89
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... . ..+..-..... ....+++.+++.+||+.+|.+||+..++.+.+..+
T Consensus 286 ~Pf~~~~~~~~~-------------~-------~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 286 SPYPGVKIDEEF-------------C-------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CSSTTCCCSHHH-------------H-------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH-------------H-------HHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99875332100 0 00000000001 12233578899999999999999999999988887
Q ss_pred hc
Q 009274 166 II 167 (538)
Q Consensus 166 ~~ 167 (538)
++
T Consensus 346 lq 347 (353)
T 4ase_A 346 LQ 347 (353)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 163
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=2.5e-16 Score=169.31 Aligned_cols=272 Identities=9% Similarity=0.052 Sum_probs=176.2
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc---CeEEEEEecCCCCEEEEEcC---------CCcEEEE
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH---KVMAVVYVDEDQPLCISGDS---------GGGIFVW 320 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~---------dg~i~vw 320 (538)
+.+++|+ |+++++ +.||+|++||+.+++....+..|.. .|.+++|+|++. .+++++. ++.+++|
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCC-EEEEEecCccceeecceeeEEEE
Confidence 5667888 666655 7899999999999998888887765 499999999766 4555554 3788999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe---------------
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV--------------- 385 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v--------------- 385 (538)
|+.++.. ..+.....+. ......+++|||+.|+.++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~--~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSN--AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ESSSCCC-EECCCTTCCS--CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ECCCCce-EeccCCcccc--ccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 9987654 1122111111 11223579999999999886 799999999988776665544433
Q ss_pred ---EEEEEe--CCEEEEEecCC----------------------------------cEEEEECCCCceeEEEecCC----
Q 009274 386 ---STLAVC--NGVLYSGSRDG----------------------------------TIRLWSLSDHSLLTVLEEDS---- 422 (538)
Q Consensus 386 ---~~l~~~--~~~l~s~s~dg----------------------------------~i~iwd~~~~~~~~~~~~~~---- 422 (538)
.+++|+ ++.|++++.|+ .|++||+.+++....+..+.
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 789999 45788877553 79999999888655555331
Q ss_pred CCceEEEEEEcCCCCEEEEEeC----CCcEEEEeCCc--ceeeecc-ccceE------EEEEeCCCEEEE--EeCCC---
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHE----SGSIKVWRNDK--FMKSMQT-HKGSV------FAVFLEGKWLFT--GGWDK--- 484 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~--~~~~~~~-h~~~v------~~~~~~~~~l~s--gs~dg--- 484 (538)
.......+.|+|||+++++... +..|++||... ....+.. +...+ ..+++||+.|+. +..++
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 1223344799999998877653 35799999543 3333333 23332 234458886664 45677
Q ss_pred ---eEEEEe-cCCCe---eEeeeecCCcccCCCceEE-EEEeCCE-EEEEEC-C--CeEEEEEcC
Q 009274 485 ---TVSVQE-LAGDE---FEEDVIPTGAIPCGSVITA-LLYWQGK-LFVGCA-D--RTVKVYYYG 537 (538)
Q Consensus 485 ---~v~iwd-~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~-l~sg~~-d--g~v~vw~~~ 537 (538)
.|++|| ..++. .. .... + ....... .+.+++. |+..+. + +.+++|+++
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~-~l~~-~---~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQ-SITS-G---DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCC-BSCC-S---SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred ceeEEEEEeccCCCCcccee-Eeec-C---CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 577777 34443 21 1111 1 1223333 3455654 555444 4 889999874
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.72 E-value=1.9e-15 Score=146.09 Aligned_cols=232 Identities=11% Similarity=0.066 Sum_probs=157.9
Q ss_pred cEEEEEEc--CCEE-EEEeCCCcEEEEeCCCCceEEEEecC-----CcCeEEEEEecCCCCEEEEEc------------C
Q 009274 254 CVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGH-----DHKVMAVVYVDEDQPLCISGD------------S 313 (538)
Q Consensus 254 ~V~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~~l~s~~------------~ 313 (538)
.+.+++|+ ++++ ++++.++.|.+||+.+++.+..+... ...+.+++|+|++..+ ++++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTL-AIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEE-EEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEE-EEEeccccccccccccc
Confidence 47889998 6555 55666889999999999988877632 1256789999976655 4443 5
Q ss_pred CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC--CCeEEEEEe
Q 009274 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK--SAVSTLAVC 391 (538)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~ 391 (538)
++.|.+||+.+++....+.. .. . ....++++++++++++ ++.|++||+.+++.+..+..+. .++ .|+
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~---~~--~-~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s 182 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA---PR--Q-ITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQ 182 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC---CS--S-CCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCC
T ss_pred CceEEEEECCCCcEEEEEeC---CC--C-cceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeC
Confidence 79999999976543322221 11 1 1234789999988877 6899999999998887775443 222 444
Q ss_pred --CCEEEEEe-cCC-----------------------cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 392 --NGVLYSGS-RDG-----------------------TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 392 --~~~l~s~s-~dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
+..++..+ .++ .|.+||+.+++.. .+...........++++|++++++++ +
T Consensus 183 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~ 259 (337)
T 1pby_B 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--Y 259 (337)
T ss_dssp CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--E
T ss_pred CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--C
Confidence 33333322 222 4789999998875 33221122223347999999999988 7
Q ss_pred CcEEEEeCCc--ceeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 446 GSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 446 g~i~iwd~~~--~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
+.|.+||... ....+..+ ..+.++.+ ++++|++++.++.|++||+.+++......
T Consensus 260 ~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 260 NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 8999999654 34444432 23445554 89999999999999999999887665544
No 165
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.72 E-value=1.3e-18 Score=166.11 Aligned_cols=115 Identities=14% Similarity=0.199 Sum_probs=80.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+...... .++++|||.|||||++ .+ ..|++++|||||||+||||++|+
T Consensus 206 ~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl------~~---------~~y~~~~DiWSlGvilyeml~G~~ 268 (346)
T 4fih_A 206 DGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELI------SR---------LPYGPEVDIWSLGIMVIEMVDGEP 268 (346)
T ss_dssp TCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEecCcCceecCCCCCc--ccccccCcCcCCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 4568999 788887654322 5679999999999999 44 56899999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+...+........ ..... .......++.+++.+||.++|.+||++.++.+
T Consensus 269 PF~~~~~~~~~~~i~~~~------~~~~~------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 269 PYFNEPPLKAMKMIRDNL------PPRLK------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp TTTTSCHHHHHHHHHHSS------CCCCS------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCcCHHHHHHHHHcCC------CCCCC------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 998765442220000000 00000 00011224778999999999999999887654
No 166
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.72 E-value=9.8e-19 Score=164.44 Aligned_cols=108 Identities=15% Similarity=0.133 Sum_probs=74.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+...+.... .++++|||.|||||++ .+ ..|++++|||||||+||||+||+
T Consensus 162 ~g~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGvilyemltG~~ 224 (304)
T 3ubd_A 162 EGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV------NR---------RGHTQSADWWSFGVLMFEMLTGTL 224 (304)
T ss_dssp TSCEEEESSEEEEC-----CC--CCSCCCCGGGCCHHHH------HT---------SCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEecccccceeccCCCcc--ccccccCcccCCHHHh------cc---------CCCCCCCcccchHHHHHHHHhCCC
Confidence 4568998 888876554432 5579999999999999 44 56889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||.+.+...+.....+ ..+.. .....+++.+++.+||+++|.+||++.
T Consensus 225 PF~~~~~~~~~~~i~~---------~~~~~------------p~~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 225 PFQGKDRKETMTMILK---------AKLGM------------PQFLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp SSCCSSHHHHHHHHHH---------CCCCC------------CTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred CCCCcCHHHHHHHHHc---------CCCCC------------CCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence 9998655522200000 00000 001122478899999999999999964
No 167
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=1.3e-14 Score=141.36 Aligned_cols=260 Identities=14% Similarity=0.120 Sum_probs=156.7
Q ss_pred CCcEEEEeCC--CCceEE-EEecCCcCeEEEEEecCCCCEEEEEcC--CCcEEEEEccCCCCCcceeeecccCCceeeeE
Q 009274 271 DKSIHVWSLK--DFSHVH-TFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI 345 (538)
Q Consensus 271 dg~i~iwd~~--~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (538)
++.|.+|+++ +++... ....+......++|+|++. +++++.. ++.|++||+.++.. ..+....... .....
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~--~~p~~ 90 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPG--TPPAY 90 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-EEEEEEEEES--CCCSE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-EEeeeeecCC--CCCEE
Confidence 5567777664 555433 2334556778899999777 6555543 78999999965432 1222211111 11224
Q ss_pred EEEeecCCEEEEee-CCCcEEEEECCC-Cc--eeEEecC---------CCCCeEEEEEe--CCEEEEEecCCcEEEEECC
Q 009274 346 HALTTSGRYLYTGS-GDRTIKAWSLLD-GT--LSCTMSG---------HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (538)
Q Consensus 346 ~~~~~~~~~l~sg~-~dg~i~iwd~~~-~~--~~~~~~~---------h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 410 (538)
.++++++++|++++ .++.|.+||+.. +. .+..+.. +...+.+++|+ ++++++...++.|.+||+.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 58899999888887 689999999963 32 3333321 12348889999 4456666678899999998
Q ss_pred -CCceeE--EEecCCCCceEEEEEEcCCCCEEEE-EeCCCcEEEEeCCc---c---eeeecccc------ceEEEEEe--
Q 009274 411 -DHSLLT--VLEEDSSGAVSSVLSLTAVQHTLVV-SHESGSIKVWRNDK---F---MKSMQTHK------GSVFAVFL-- 472 (538)
Q Consensus 411 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~---~---~~~~~~h~------~~v~~~~~-- 472 (538)
+++... .+... .+.....++|+|+|+++++ +..++.+.+|+... . ...+.... ..+..+.+
T Consensus 171 ~~g~~~~~~~~~~~-~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 171 DAGQLSEQSVLTME-AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TTSCEEEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCcEEEeeeEEcC-CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 554332 22222 2222333799999996666 45688999998442 1 22222221 34555655
Q ss_pred CCCEE-EEEeCCCeEEEEecCCC-eeEeeeecCCcccCCCceEEEEEeCCE-EEEEEC-CCeEEEEEcC
Q 009274 473 EGKWL-FTGGWDKTVSVQELAGD-EFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCA-DRTVKVYYYG 537 (538)
Q Consensus 473 ~~~~l-~sgs~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~-dg~v~vw~~~ 537 (538)
+|++| ++...++.|.+|++... .......... ....+....+.+++. |++++. ++.|.+|++.
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 89877 55667899999999732 2211111110 011233444556665 777665 5999999663
No 168
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.71 E-value=1.6e-15 Score=158.76 Aligned_cols=256 Identities=14% Similarity=0.061 Sum_probs=180.3
Q ss_pred ceeeeeccCcceeEEeec-CCeEEEEEeec--------CC-CcEEEEEEc-CCEEEEEeC---CCcEEEEeCCC---Cce
Q 009274 222 IDQARAAGGVKDLVNGLS-KGNVKFKDLQG--------HR-DCVTGLAVG-GGFLFSSSF---DKSIHVWSLKD---FSH 284 (538)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~--------h~-~~V~~l~~~-~~~l~s~s~---dg~i~iwd~~~---~~~ 284 (538)
+..+.++++++.++.... ++...+|.+.+ |. ..+.+++|+ ++.+++++. +...++|.+.. +..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~ 103 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE 103 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCcc
Confidence 567778888888887665 88888888643 44 588999999 656666654 45566665432 333
Q ss_pred EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC---
Q 009274 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD--- 361 (538)
Q Consensus 285 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--- 361 (538)
. .+..+ ..+...+|+|+++.++++.+.++.+.+||+.+++...... ... ...+++|||+++++++.+
T Consensus 104 ~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~----~~~----~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 104 Q-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR----LPG----FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp E-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE----ESS----CEEEEEEETTEEEEEEEEETT
T ss_pred c-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec----CCC----ceEEECCCCCEEEEEEEcCCC
Confidence 3 33322 2345678999888766666666666699998764322111 111 345899999999988877
Q ss_pred -CcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCC--cEEEEECCCCceeEEEecCCCCceEE-------E
Q 009274 362 -RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG--TIRLWSLSDHSLLTVLEEDSSGAVSS-------V 429 (538)
Q Consensus 362 -g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~-------~ 429 (538)
+.|++||+.+++.. .+..|...+.+++|+ ++.|+++..++ .|++||+.+++.. .+..+ ...+.. .
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP-SKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS-CSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC-CcChhhhhhccccc
Confidence 78999999888765 667888999999999 45788888888 8999999998876 44433 221111 1
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCcceeeeccccceEEEEEe-CCCEEEEEeCCCe---EEEEecCC
Q 009274 430 LSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFL-EGKWLFTGGWDKT---VSVQELAG 493 (538)
Q Consensus 430 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~-~~~~l~sgs~dg~---v~iwd~~~ 493 (538)
.+|+|||.++++++.|+.+++|+.++... .+.+.+.++++ +++++++++.+.. +++||..+
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFIDGERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEETTEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEECCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence 23999999999999999999999832222 34456766665 8888888887744 77777665
No 169
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.69 E-value=9.3e-18 Score=164.36 Aligned_cols=115 Identities=14% Similarity=0.210 Sum_probs=80.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+...... .++++|||.|||||++ .+ ..|++++|||||||+||||++|+
T Consensus 283 ~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl------~~---------~~y~~~~DiWSlGvilyeml~G~~ 345 (423)
T 4fie_A 283 DGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELI------SR---------LPYGPEVDIWSLGIMVIEMVDGEP 345 (423)
T ss_dssp TCCEEECCCTTCEECCSSCCC--BCCCEECTTTCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEecCccceECCCCCcc--ccccccCcCcCCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 4568999 888887654322 5679999999999999 44 67899999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.+...+....... .+.. ..........+.+++.+||.++|.+||++.++.+
T Consensus 346 PF~~~~~~~~~~~i~~~---------~~~~---------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 346 PYFNEPPLKAMKMIRDN---------LPPR---------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTTTSCHHHHHHHHHHS---------CCCC---------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCcCHHHHHHHHHcC---------CCCC---------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 99876544222000000 0000 0000111234788999999999999999887654
No 170
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.66 E-value=1.3e-17 Score=158.38 Aligned_cols=139 Identities=10% Similarity=0.063 Sum_probs=80.2
Q ss_pred eeeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 11 KSVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
+..+|++ |||+......... ...+.+||+.|||||++ .+. .....+.++.++|||||||+||||+||
T Consensus 144 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l------~~~---~~~~~~~~~~k~DVwS~Gvvl~El~tg 214 (303)
T 3hmm_A 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------DDS---INMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp TSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHH------TTC---SCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHh------ccc---ccccCCccChhHhhhhHHHHHHHHHHC
Confidence 4679999 8888776554321 13357999999999999 320 000124678899999999999999999
Q ss_pred C-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh----hcC------ccchHHHHHhhhhccCCCCCcch
Q 009274 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK----FGS------EFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
. ||............ ..............+.... .+. ....+.+++.+||+.+|.+||++
T Consensus 215 ~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 285 (303)
T 3hmm_A 215 CSIGGIHEDYQLPYYD---------LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 285 (303)
T ss_dssp BCBTTBCCCCCCTTTT---------TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCH
T ss_pred CCCCCccccccccchh---------cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCH
Confidence 8 66442211000000 0000000000000000000 000 01136789999999999999999
Q ss_pred hhHHHHHHHhhc
Q 009274 156 TNVWKCIRELII 167 (538)
Q Consensus 156 ~~~~~~l~~l~~ 167 (538)
.++.+.+.++..
T Consensus 286 ~ei~~~L~~l~~ 297 (303)
T 3hmm_A 286 LRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998887753
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.66 E-value=2.9e-13 Score=132.52 Aligned_cols=259 Identities=10% Similarity=0.146 Sum_probs=154.4
Q ss_pred CCCcEEEEeC--CCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC----CcEEEEEccCC-CCCcceeeecccCCcee
Q 009274 270 FDKSIHVWSL--KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFP-LGHEPLKKWNEEKDWRY 342 (538)
Q Consensus 270 ~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~-~~~~~~~~~~~~~~~~~ 342 (538)
.++.|.+|++ .+++.......+......++|+|++. ++++++.+ +.|.+|++... .....+........
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~--- 100 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGK-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA--- 100 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSS-EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS---
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCC-EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC---
Confidence 4678888876 45554332222667778899999765 55555554 89999998764 22222222211111
Q ss_pred eeEEEEeecCCEEEEee-CCCcEEEEECCCCceeEEe------cC--------CCCCeEEEEEe--CCEEEEEe-cCCcE
Q 009274 343 SGIHALTTSGRYLYTGS-GDRTIKAWSLLDGTLSCTM------SG--------HKSAVSTLAVC--NGVLYSGS-RDGTI 404 (538)
Q Consensus 343 ~~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~------~~--------h~~~v~~l~~~--~~~l~s~s-~dg~i 404 (538)
....+..+++++++++ .++.|.+|++.....+..+ .+ +...+.+++|+ ++++++++ .++.|
T Consensus 101 -~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 101 -DPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp -CEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred -CcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 1223344888777766 5789999999754332211 11 12345889999 44555554 58899
Q ss_pred EEEECCCCce------e------EEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCc--c--eeeec---ccc
Q 009274 405 RLWSLSDHSL------L------TVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK--F--MKSMQ---THK 464 (538)
Q Consensus 405 ~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~--~~~~~---~h~ 464 (538)
.+|++..... + .......... ...++|+|+|+++++++ .++.|.+||... . ...+. .+.
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSG-PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC-EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCC-CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 9999875431 1 1222222222 33479999999888777 689999999542 1 22222 222
Q ss_pred ceEEEEEe--CCCEEEEEeCC--CeEEEEecC--CCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEE-CCCeEEEEEc
Q 009274 465 GSVFAVFL--EGKWLFTGGWD--KTVSVQELA--GDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGC-ADRTVKVYYY 536 (538)
Q Consensus 465 ~~v~~~~~--~~~~l~sgs~d--g~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~-~dg~v~vw~~ 536 (538)
....++.+ ||++|+++..+ +.|.+|++. +++......... ...+....+.+++. |++++ .++.|.+|++
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 33455555 99988776665 899999996 344322211111 11233444556665 66666 6799999876
Q ss_pred C
Q 009274 537 G 537 (538)
Q Consensus 537 ~ 537 (538)
.
T Consensus 336 d 336 (361)
T 3scy_A 336 D 336 (361)
T ss_dssp C
T ss_pred E
Confidence 4
No 172
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.65 E-value=1.5e-17 Score=157.05 Aligned_cols=113 Identities=21% Similarity=0.276 Sum_probs=66.6
Q ss_pred eeeeeec--cccccccccchhh----------hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVGL----------FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~ 78 (538)
++..|++ |+|+.++...... ..++.+|||.|||||++ .| ..|++++|||||||
T Consensus 154 ~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGv 218 (299)
T 4g31_A 154 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI------HG---------NSYSHKVDIFSLGL 218 (299)
T ss_dssp TCCEEECCCCCC--------------------------CCCTTSCHHHH------TT---------CCCCTHHHHHHHHH
T ss_pred CCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHH------cC---------CCCCCHHHHHHHHH
Confidence 4578999 8888876543221 13457999999999999 54 57889999999999
Q ss_pred hhhhhhhcCccchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 79 ILLSLLIGEQFTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 79 ~l~~lltg~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
+||||++ ||...... ... .... ....++.+ +.. .+.+.+++.+||+.+|.+||++.+
T Consensus 219 ilyell~--Pf~~~~~~~~~~-~~~~-------~~~~p~~~----~~~--------~~~~~~li~~~L~~dP~~Rps~~e 276 (299)
T 4g31_A 219 ILFELLY--PFSTQMERVRTL-TDVR-------NLKFPPLF----TQK--------YPCEYVMVQDMLSPSPMERPEAIN 276 (299)
T ss_dssp HHHHHHS--CCSSHHHHHHHH-HHHH-------TTCCCHHH----HHH--------CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHcc--CCCCccHHHHHH-HHHh-------cCCCCCCC----ccc--------CHHHHHHHHHHcCCChhHCcCHHH
Confidence 9999997 77654322 100 0000 00111111 111 112567899999999999999887
Q ss_pred HHH
Q 009274 158 VWK 160 (538)
Q Consensus 158 ~~~ 160 (538)
+.+
T Consensus 277 il~ 279 (299)
T 4g31_A 277 IIE 279 (299)
T ss_dssp HHT
T ss_pred Hhc
Confidence 654
No 173
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.2e-14 Score=156.26 Aligned_cols=267 Identities=9% Similarity=-0.026 Sum_probs=167.1
Q ss_pred EEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc---CeEEEEEecCCCCEEEEEcC---------CCcEEEEEcc
Q 009274 257 GLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH---KVMAVVYVDEDQPLCISGDS---------GGGIFVWSFS 323 (538)
Q Consensus 257 ~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~---------dg~i~vwd~~ 323 (538)
+++|+ ...++..+.|++|++||+.+++....+..|.. .+.+++|+|++..+ ++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~l-a~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFV-YLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEE-EEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeE-EEEecCceeEEeecceEEEEEECC
Confidence 56777 33455555799999999999998877766544 48999999976654 55544 7899999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEe-cCCCCCe-----------------
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGHKSAV----------------- 385 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~h~~~v----------------- 385 (538)
+++...... .. ......+++|||+.|+.+. ++.|++||+.+++..... .++...|
T Consensus 99 ~g~~~~~~~-l~-----~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 99 NGEFVRGNE-LP-----RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTEECCSSC-CC-----SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCcccccee-cC-----cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 765411011 11 1122468999999999886 689999999888765432 2333222
Q ss_pred EEEEEe--CCEEEEEecCC----------------------------------cEEEEECCCCcee--EEEec-----CC
Q 009274 386 STLAVC--NGVLYSGSRDG----------------------------------TIRLWSLSDHSLL--TVLEE-----DS 422 (538)
Q Consensus 386 ~~l~~~--~~~l~s~s~dg----------------------------------~i~iwd~~~~~~~--~~~~~-----~~ 422 (538)
.+++|+ ++.|++++.|. .|++||+.+++.. ..+.. .+
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 489999 45888887652 7889999887653 12211 12
Q ss_pred CCceEEEEEEcCCCCEEEEEeCC----CcEEEEe----CCc--ceeee----ccccceEE-----EE--EeCCCEEEE--
Q 009274 423 SGAVSSVLSLTAVQHTLVVSHES----GSIKVWR----NDK--FMKSM----QTHKGSVF-----AV--FLEGKWLFT-- 479 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~--~~~~~----~~h~~~v~-----~~--~~~~~~l~s-- 479 (538)
.. ....++|+||++++++.... ..|.+|| ... ....+ ..|...+. .+ ++||+.++.
T Consensus 252 ~~-~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 252 DY-YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp CE-EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred cc-eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 22 33446899998777764432 2488889 543 23333 35555544 33 458885544
Q ss_pred EeCCC--eEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEEC-----CCeEEEEEcC
Q 009274 480 GGWDK--TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCA-----DRTVKVYYYG 537 (538)
Q Consensus 480 gs~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----dg~v~vw~~~ 537 (538)
...+| .|.+||+.+++....... ...+....+++++.++..+. ++..++|.+.
T Consensus 331 ~~~~g~~~l~~~~~~~~~~~~lt~~-----~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVENAIQITSG-----KWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp ECTTSCEEEEEESSCSTTCEECSCS-----SSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EccCCceEEEEEECCCCceEecccC-----ceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEe
Confidence 44555 577778877653322111 11223334444455665554 4889999763
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=1e-12 Score=123.99 Aligned_cols=237 Identities=11% Similarity=0.185 Sum_probs=161.5
Q ss_pred ecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEec------CCcCeEEEEEecCCCCEEEEEcC-CCcEEE
Q 009274 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG------HDHKVMAVVYVDEDQPLCISGDS-GGGIFV 319 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~~~-dg~i~v 319 (538)
.+|-..+.+++++ ++++++.+.++.|.+||.+ ++.+..+.. +...+.++++.+.++.++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3566789999998 7778887889999999987 666666642 34578899996555666666643 899999
Q ss_pred EEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe-CC-EE
Q 009274 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC-NG-VL 395 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~-~l 395 (538)
||.. +.. +..+..... .....++++++++.+++...++.|++||. .++.+..+. .+...+.+++++ ++ ++
T Consensus 105 ~d~~-g~~---~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YNQY-GQF---VRKFGATIL-QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp ECTT-SCE---EEEECTTTC-SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred ECCC-CcE---EEEecCccC-CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 9943 322 222211111 11234577888888887778899999996 456666553 445678999999 34 55
Q ss_pred EEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC-cEEEEeCC-cceeeeccccc--eEEEEE
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG-SIKVWRND-KFMKSMQTHKG--SVFAVF 471 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~-~~~~~~~~h~~--~v~~~~ 471 (538)
++.+.++.|++||. +++.+..+...........++++++|+++++...++ .|.+||.. +.+..+..+.. .+.+++
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~ 257 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVA 257 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEE
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEE
Confidence 55567899999997 455666654321112233479999999888887776 99999954 34555544432 355555
Q ss_pred e--CCCEEEEEeCCCeEEEEecCCC
Q 009274 472 L--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 472 ~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+ +|+++++ +.|++|++|++...
T Consensus 258 ~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 258 LMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ECCCCcEEEE-CCCCeEEEEEcccc
Confidence 4 7776666 67999999998653
No 175
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.61 E-value=1.9e-14 Score=139.84 Aligned_cols=221 Identities=10% Similarity=0.063 Sum_probs=145.8
Q ss_pred EEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEE-EeeCCCcEEEEECCCCceeEE
Q 009274 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCT 377 (538)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~ 377 (538)
++++ ++.++++++.++.|++||..+++....+.. ... ......++++++++++ ++..++.|.+||+.+++.+..
T Consensus 6 ~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~-~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 6 ALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVM---PDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEEC---SSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEec---CCC-CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 4444 566889999999999999987643332221 110 0122457899998654 555789999999999988877
Q ss_pred ecCCC------CCeEEEEEe--CCEEEEEecC------------CcEEEEECCCCce---eEEEecCCCCceEEEEEEcC
Q 009274 378 MSGHK------SAVSTLAVC--NGVLYSGSRD------------GTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTA 434 (538)
Q Consensus 378 ~~~h~------~~v~~l~~~--~~~l~s~s~d------------g~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~ 434 (538)
+..+. ..+.+++|+ ++++++++.+ +.|.+||+.+++. +..+..+. .+. .++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~-~~~~s~ 157 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--QVY-LMRAAD 157 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS--SCC-CEEECT
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC--ccc-ceeECC
Confidence 75332 237889998 4588888765 8999999988543 33343322 222 368999
Q ss_pred CCCEEEEEeCCCcEEEEeCC--cceeeecccc-------------------------c----------------------
Q 009274 435 VQHTLVVSHESGSIKVWRND--KFMKSMQTHK-------------------------G---------------------- 465 (538)
Q Consensus 435 ~~~~l~~~~~dg~i~iwd~~--~~~~~~~~h~-------------------------~---------------------- 465 (538)
+++ +++++. .|.+||.. +....+..+. .
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 666543 49999954 3333332221 0
Q ss_pred ---------------------eEE--EEEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC-
Q 009274 466 ---------------------SVF--AVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG- 520 (538)
Q Consensus 466 ---------------------~v~--~~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 520 (538)
.+. ++++ ++++++++ ++.|++||+.+++......... .+....+.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~ 307 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH-----TYYCVAFDKKGD 307 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS-----CCCEEEECSSSS
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC-----CccceEECCCCC
Confidence 111 2235 78888888 8899999999988765544321 13344445554
Q ss_pred EEEEEECCCeEEEEEcC
Q 009274 521 KLFVGCADRTVKVYYYG 537 (538)
Q Consensus 521 ~l~sg~~dg~v~vw~~~ 537 (538)
.|++++.++.|++||..
T Consensus 308 ~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp CEEEESBSSEEEEEETT
T ss_pred EEEEecCCCeEEEEecc
Confidence 57788889999999985
No 176
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.61 E-value=6.6e-13 Score=130.19 Aligned_cols=265 Identities=11% Similarity=0.091 Sum_probs=159.0
Q ss_pred EEEEEeCC--CcEEEEeC--CCCceEE--EEe-cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc-CCCCCcceeeec
Q 009274 264 FLFSSSFD--KSIHVWSL--KDFSHVH--TFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS-FPLGHEPLKKWN 335 (538)
Q Consensus 264 ~l~s~s~d--g~i~iwd~--~~~~~~~--~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 335 (538)
+++.|+.. +.|.+|++ .+++... ... .+...+..++|+|++. ++++++.+ .|.+|++. +++... .....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-NIYGAAMK-KWSSFAVKSPTEIVH-EASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-EEEEEEBT-EEEEEEEEETTEEEE-EEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-EEEEEccc-eEEEEEECCCCCEEE-eeEee
Confidence 45566653 56887765 4565432 221 2334678899999665 55677766 99999997 443211 11111
Q ss_pred ccCCceeeeEEEEeecCCE--EEEee-------------CCCcEEEEECC-CCceeEEec----CCCCCeEEEEEe--CC
Q 009274 336 EEKDWRYSGIHALTTSGRY--LYTGS-------------GDRTIKAWSLL-DGTLSCTMS----GHKSAVSTLAVC--NG 393 (538)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~--l~sg~-------------~dg~i~iwd~~-~~~~~~~~~----~h~~~v~~l~~~--~~ 393 (538)
.. . . ....+++|+|++ +++++ .+|.+.+|++. .++....+. .+...+.+++|+ ++
T Consensus 81 ~~-g-~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 81 IG-G-H-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp CC-S-S-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred cC-C-C-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 00 1 1 112477889984 55553 68999999997 466544433 255679999999 44
Q ss_pred EEEEEe-cCCcEEEEECC-CCcee--EEEecCCCCceEEEEEEcCCCCEEEEEeC-CCcEEEEeCC----cce---eeec
Q 009274 394 VLYSGS-RDGTIRLWSLS-DHSLL--TVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRND----KFM---KSMQ 461 (538)
Q Consensus 394 ~l~s~s-~dg~i~iwd~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~----~~~---~~~~ 461 (538)
+++++. .++.|++||+. +++.. ..+.....+.....++|+|+|+++++++. ++.|.+|+.. +.. ..+.
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 677665 46899999998 67653 22332111222334799999999988775 6899999742 221 1121
Q ss_pred -------cccc------eEEEEE-e--CCCEEEEEeCCC------eEEEEecC-CCeeEeee--ecCCcccCCCceEEEE
Q 009274 462 -------THKG------SVFAVF-L--EGKWLFTGGWDK------TVSVQELA-GDEFEEDV--IPTGAIPCGSVITALL 516 (538)
Q Consensus 462 -------~h~~------~v~~~~-~--~~~~l~sgs~dg------~v~iwd~~-~~~~~~~~--~~~~~~~~~~~~~~~~ 516 (538)
+|.. .+.++. + ||++|++++.+. .|.+|++. ++++.... .... ........+
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~---~~~~~~~a~ 314 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP---TSGGHSNAV 314 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS---SCCTTCCCE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC---CCCccccee
Confidence 2222 455666 4 899888776432 89999996 55543211 1110 111222334
Q ss_pred Ee---CC-EEEEEEC-CCeEEEEEcC
Q 009274 517 YW---QG-KLFVGCA-DRTVKVYYYG 537 (538)
Q Consensus 517 ~~---~~-~l~sg~~-dg~v~vw~~~ 537 (538)
.+ ++ .|++++. ++.|.+|++.
T Consensus 315 sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 315 SPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred cCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 55 44 5777765 5999999874
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.61 E-value=5.3e-13 Score=130.84 Aligned_cols=244 Identities=11% Similarity=0.092 Sum_probs=157.6
Q ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEeCC-CCceEEEEecC-CcCeEEEEEecCCCC-EEEEEc-------------
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK-DFSHVHTFKGH-DHKVMAVVYVDEDQP-LCISGD------------- 312 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~l~~~~~~~~-~l~s~~------------- 312 (538)
+...+..++++ +++|++++.+ .|.+|++. +++........ .+...+++|+|++.. ++++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44567889998 8889999888 99999997 77765433211 123556888887765 345553
Q ss_pred CCCcEEEEEccC-CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-CCcEEEEECC-CCcee--EEec--CCCCCe
Q 009274 313 SGGGIFVWSFSF-PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLL-DGTLS--CTMS--GHKSAV 385 (538)
Q Consensus 313 ~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~-~~~~~--~~~~--~h~~~v 385 (538)
.+|.+.+|++.. +.....+........ ......+++|+|++++++.. ++.|++||+. +++.. ..+. .|...+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQEN-TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTT-CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCC-CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 689999999974 322222222111111 12234588999998887654 6899999998 67653 3333 245678
Q ss_pred EEEEEe--CCEEEEEec-CCcEEEEECC--CCceeE---EEecCC---CC-c-------eEEEEE-EcCCCCEEEEEeCC
Q 009274 386 STLAVC--NGVLYSGSR-DGTIRLWSLS--DHSLLT---VLEEDS---SG-A-------VSSVLS-LTAVQHTLVVSHES 445 (538)
Q Consensus 386 ~~l~~~--~~~l~s~s~-dg~i~iwd~~--~~~~~~---~~~~~~---~~-~-------~~~~~~-~~~~~~~l~~~~~d 445 (538)
..++|+ ++++++++. ++.|.+|++. +++... .+.... .+ . ....++ ++|||++|+++..+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 999999 447777664 7899999875 565432 222111 11 1 234468 99999998877643
Q ss_pred C------cEEEEeCCc--ceee----ecccc--ceEEEEEe---CCCEEEEEeCC-CeEEEEecCCCee
Q 009274 446 G------SIKVWRNDK--FMKS----MQTHK--GSVFAVFL---EGKWLFTGGWD-KTVSVQELAGDEF 496 (538)
Q Consensus 446 g------~i~iwd~~~--~~~~----~~~h~--~~v~~~~~---~~~~l~sgs~d-g~v~iwd~~~~~~ 496 (538)
. .|.+|+... .+.. ...+. ..-.++++ +|++|++++.+ +.|.+|++....+
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 2 899998631 2221 22222 22245677 79999999875 8999999987643
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=3.8e-13 Score=132.93 Aligned_cols=287 Identities=9% Similarity=-0.002 Sum_probs=178.3
Q ss_pred EEEEeecCCCcEEE-----EEEc--CCEEEEEeC-CCc--EEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcC
Q 009274 244 KFKDLQGHRDCVTG-----LAVG--GGFLFSSSF-DKS--IHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS 313 (538)
Q Consensus 244 ~i~~l~~h~~~V~~-----l~~~--~~~l~s~s~-dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 313 (538)
.+..+..|...... .+|+ |++|+.++. ++. |.+||+.+++......++...+..+.|+|++. .|+.++.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~-~l~~~~~ 100 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD-ALFYVKD 100 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS-EEEEEET
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC-EEEEEeC
Confidence 45667777766666 7788 888888887 664 88889999888777667766666778999665 5677777
Q ss_pred CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEe----------------------eCCCcEEEEECCC
Q 009274 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTG----------------------SGDRTIKAWSLLD 371 (538)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg----------------------~~dg~i~iwd~~~ 371 (538)
++.|++||+.+++..... ..+..........++++++.++.. ..+..|++||+.+
T Consensus 101 ~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TTEEEEEETTTCCEEEEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CCeEEEEECCCCcceeee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 889999999876533221 112221111223457888877642 2457899999998
Q ss_pred CceeEEecCCCCCeEEEEEeC-C--EEEEEecC------CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 009274 372 GTLSCTMSGHKSAVSTLAVCN-G--VLYSGSRD------GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 372 ~~~~~~~~~h~~~v~~l~~~~-~--~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
++.... ..+...+..++|++ + .|+.++.+ ..|.++|...++. ..+..+..........|+|||+.|+..
T Consensus 178 g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 178 GESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEE
Confidence 865443 34667789999986 3 66666543 3788888866543 333333222233346899999977654
Q ss_pred eC-CC----cEEEEeCCcc----eeeeccccceE-----EEEEeCCCEEEEE---------eCCCeEEEEecCCCeeEee
Q 009274 443 HE-SG----SIKVWRNDKF----MKSMQTHKGSV-----FAVFLEGKWLFTG---------GWDKTVSVQELAGDEFEED 499 (538)
Q Consensus 443 ~~-dg----~i~iwd~~~~----~~~~~~h~~~v-----~~~~~~~~~l~sg---------s~dg~v~iwd~~~~~~~~~ 499 (538)
+. ++ .|++||.... +..+.++.... ..+++||+.|+.. ..+..|++||+.+++....
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEe
Confidence 43 22 3999996532 22222211111 1467788877754 4567899999999876554
Q ss_pred eecCCccc------CCCceEEEEEeCCE-EEE-EECCCeEEEEEc
Q 009274 500 VIPTGAIP------CGSVITALLYWQGK-LFV-GCADRTVKVYYY 536 (538)
Q Consensus 500 ~~~~~~~~------~~~~~~~~~~~~~~-l~s-g~~dg~v~vw~~ 536 (538)
..+..... ........+.+|+. |+. +..+|...+|.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 44332000 00122334556764 544 556787788765
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=4.6e-13 Score=142.34 Aligned_cols=280 Identities=9% Similarity=-0.016 Sum_probs=173.8
Q ss_pred EeecCCCcEEEEEEcCCEEEEE----eCCCcEEEEeCCCCceEEEEecCCcCeE---------EEEEe--cCCCC-EEEE
Q 009274 247 DLQGHRDCVTGLAVGGGFLFSS----SFDKSIHVWSLKDFSHVHTFKGHDHKVM---------AVVYV--DEDQP-LCIS 310 (538)
Q Consensus 247 ~l~~h~~~V~~l~~~~~~l~s~----s~dg~i~iwd~~~~~~~~~~~~h~~~v~---------~l~~~--~~~~~-~l~s 310 (538)
.+.+|...+..++++++.++-. +.++...||....+.....+..|...+. ...|+ |+++. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 4678999999999995544433 3478899999655555667777766666 66676 88887 6666
Q ss_pred EcCCCcEEEEEcc--CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC----------CcEEEEECCC------C
Q 009274 311 GDSGGGIFVWSFS--FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD----------RTIKAWSLLD------G 372 (538)
Q Consensus 311 ~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----------g~i~iwd~~~------~ 372 (538)
...+..|.+|++. .......+...............+++|||+.|++++.+ ..|++||+.+ +
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred ECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 5556777777765 20222222211100011223356899999999988877 5899999987 4
Q ss_pred ceeEEec-CCCCCeEEEEEe--CCEEEEEecC--------CcEEEEECC-CCc--eeEEEecCCCCceEEEEEEcCCCCE
Q 009274 373 TLSCTMS-GHKSAVSTLAVC--NGVLYSGSRD--------GTIRLWSLS-DHS--LLTVLEEDSSGAVSSVLSLTAVQHT 438 (538)
Q Consensus 373 ~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (538)
+. ..+. .+...+..++|+ +++|+.++.+ ..|++||+. +++ ....+...+...... ..|+|||++
T Consensus 178 ~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~-~~~spdg~l 255 (662)
T 3azo_A 178 AV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ-AEWAPDGSL 255 (662)
T ss_dssp GS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE-EEECTTSCE
T ss_pred ce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc-eEECCCCeE
Confidence 44 4555 566778889999 4578777755 379999998 562 333343332333333 689999998
Q ss_pred EEEEeCCC--cEEEEeCC-cceeee-ccccce--------EEEEEe--CCCEEEEEeCCCeEEEE--ecCCCeeEeeeec
Q 009274 439 LVVSHESG--SIKVWRND-KFMKSM-QTHKGS--------VFAVFL--EGKWLFTGGWDKTVSVQ--ELAGDEFEEDVIP 502 (538)
Q Consensus 439 l~~~~~dg--~i~iwd~~-~~~~~~-~~h~~~--------v~~~~~--~~~~l~sgs~dg~v~iw--d~~~~~~~~~~~~ 502 (538)
++++..++ .|.+||.. .....+ ..+... +.++.+ +++++++++. +.+++| |+.+++......+
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGP 334 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCC
Confidence 88888888 55666642 222223 222221 334554 7889999988 999999 6666664332211
Q ss_pred CCcccCCCceEEE-EEeCCE-EEE-EECCCeEEEEE
Q 009274 503 TGAIPCGSVITAL-LYWQGK-LFV-GCADRTVKVYY 535 (538)
Q Consensus 503 ~~~~~~~~~~~~~-~~~~~~-l~s-g~~dg~v~vw~ 535 (538)
...+..+ ..+++. +++ ++.+....+|.
T Consensus 335 ------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 335 ------WTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp ------CCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ------CCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 2233444 444554 333 55555555554
No 180
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=5.6e-14 Score=150.92 Aligned_cols=264 Identities=10% Similarity=0.074 Sum_probs=163.6
Q ss_pred eeccCcceeEEeecCCeEEEEEee---------cCCC---cEEEEEEc--CCEEEEEeC---------CCcEEEEeCCCC
Q 009274 226 RAAGGVKDLVNGLSKGNVKFKDLQ---------GHRD---CVTGLAVG--GGFLFSSSF---------DKSIHVWSLKDF 282 (538)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~l~---------~h~~---~V~~l~~~--~~~l~s~s~---------dg~i~iwd~~~~ 282 (538)
.+++++. ++....++.+.+|+.. +|.. .|.+++|+ |++|++++. |+.|++||+.++
T Consensus 22 ~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 22 NWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp EESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 3344443 3333345666666643 2322 38899999 899998876 789999999988
Q ss_pred ceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeec------ccCCc-------eeeeEEEEe
Q 009274 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN------EEKDW-------RYSGIHALT 349 (538)
Q Consensus 283 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~~ 349 (538)
+.+.. ......+..++|+|++..++++ .++.|++||+.++.......... ....+ ......+|+
T Consensus 101 ~~~~~-~~l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 101 EFVRG-NELPRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp EECCS-SCCCSSBCCEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred ccccc-eecCcccccceECCCCCEEEEE--ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 76210 1113568899999988766444 37899999998765322111100 00000 001246899
Q ss_pred ecCCEEEEeeCCC----------------------------------cEEEEECCCCcee--------EEecCCCCCeEE
Q 009274 350 TSGRYLYTGSGDR----------------------------------TIKAWSLLDGTLS--------CTMSGHKSAVST 387 (538)
Q Consensus 350 ~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~--------~~~~~h~~~v~~ 387 (538)
|||++|++++.|. .|++||+.+++.. ..+.+|...+.+
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 9999999987652 7899999887653 223468888999
Q ss_pred EEEe-CC-EEEEEecC----CcEEEEE----CCCCceeEEEe---cCCCCceE----EEEEEcCCCCEEEE--EeCCCc-
Q 009274 388 LAVC-NG-VLYSGSRD----GTIRLWS----LSDHSLLTVLE---EDSSGAVS----SVLSLTAVQHTLVV--SHESGS- 447 (538)
Q Consensus 388 l~~~-~~-~l~s~s~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~l~~--~~~dg~- 447 (538)
++|+ ++ ++++.... ..|.+|| +.+++....+. ..+.+.+. ....|+|||+.++. +..+|.
T Consensus 258 ~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~ 337 (719)
T 1z68_A 258 LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYK 337 (719)
T ss_dssp EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCE
T ss_pred eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCce
Confidence 9999 44 44443322 2488999 77776544432 22222222 12589999986554 445664
Q ss_pred -EEEEeCCc-ceeeeccccceEEEEEe-CCCEEEEEeCC-----CeEEEEecCC
Q 009274 448 -IKVWRNDK-FMKSMQTHKGSVFAVFL-EGKWLFTGGWD-----KTVSVQELAG 493 (538)
Q Consensus 448 -i~iwd~~~-~~~~~~~h~~~v~~~~~-~~~~l~sgs~d-----g~v~iwd~~~ 493 (538)
|.+||... ....+..+...+..+.+ +++.|+..+.+ +..++|.+..
T Consensus 338 ~l~~~~~~~~~~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 338 HIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEESSCSTTCEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEECCCCceEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeC
Confidence 55566432 34455555555554432 78777776665 8889998754
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=3.7e-12 Score=120.13 Aligned_cols=237 Identities=10% Similarity=0.144 Sum_probs=153.2
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc----CCceeeeEEEEe-ecCCEEEEeeC-CCcE
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE----KDWRYSGIHALT-TSGRYLYTGSG-DRTI 364 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~l~sg~~-dg~i 364 (538)
+-....++++.+++ .++++...++.|.+||... .. +..+... .........++. ++++.+++... ++.|
T Consensus 28 ~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g-~~---~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG-RF---KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp CBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS-CE---EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred ccCCCceEEECCCC-CEEEEECCCCEEEEECCCC-cE---EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 44578899998864 5778888899999999762 21 2221110 001112233553 45555555533 7899
Q ss_pred EEEECCCCceeEEec-CCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 009274 365 KAWSLLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (538)
Q Consensus 365 ~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 441 (538)
++|| .+++.+..+. .+...+.+++++ ++++++...++.|.+||. +++.+..+...........++++++++++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5677776664 344678999998 446666667889999996 4566666543212222344799999998888
Q ss_pred EeCCCcEEEEeCC-cceeeeccc--cceEEEEEe--CCCEEEEEeCCC-eEEEEecCCCeeEeeeecCCcccCCCceEEE
Q 009274 442 SHESGSIKVWRND-KFMKSMQTH--KGSVFAVFL--EGKWLFTGGWDK-TVSVQELAGDEFEEDVIPTGAIPCGSVITAL 515 (538)
Q Consensus 442 ~~~dg~i~iwd~~-~~~~~~~~h--~~~v~~~~~--~~~~l~sgs~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (538)
...++.|++||.. +.+..+..+ .....++++ +|+++++...++ .|++||..+.......... . ...+....
T Consensus 181 ~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-~--~~~~~~i~ 257 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV-K--HAQCFDVA 257 (286)
T ss_dssp EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS-C--CSCEEEEE
T ss_pred ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-C--CCcceeEE
Confidence 7789999999954 344445433 345666766 788888887776 9999997654433222211 1 11233444
Q ss_pred EEeCCEEEEEECCCeEEEEEcC
Q 009274 516 LYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 516 ~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
+.+++.+++++.|+.|++|++.
T Consensus 258 ~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 258 LMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EETTTEEEEEETTTEEEEEECS
T ss_pred ECCCCcEEEECCCCeEEEEEcc
Confidence 4568888777889999999975
No 182
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.57 E-value=8.8e-16 Score=150.69 Aligned_cols=135 Identities=14% Similarity=0.239 Sum_probs=77.8
Q ss_pred eeeeeec--cccccccccc--hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 11 KSVAKVG--CVGSRICDKE--VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
++..|+. |+|+.+.... .....++++||+.|||||++ .| ...++.++|||||||+||||++|
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~------~~--------~~~~~~~~DiWSlG~il~ell~G 259 (398)
T 4b99_A 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM------LS--------LHEYTQAIDLWSVGCIFGEMLAR 259 (398)
T ss_dssp TCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeecceeeecccCccccccccccceeChHhcCHHHh------cC--------CCCCCChhheehhHHHHHHHHHC
Confidence 4567888 8888775432 12235579999999999998 44 23468999999999999999999
Q ss_pred C-ccchhhhhheee-c-cccccCcchhhcchh--hHHHHHHHHHHH-------hhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 87 E-QFTKELIDYIRC-V-STKASDDNIACLGMY--MAWMEKVTYLLE-------NKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 87 ~-pf~~~~~~~~~~-~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
+ ||.+.+...++. + ....... ...+... ..........+. ...+.....+.+++.+||.++|.+|++
T Consensus 260 ~~pF~g~~~~~~l~~I~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t 338 (398)
T 4b99_A 260 RQLFPGKNYVHQLQLIMMVLGTPS-PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS 338 (398)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCC-GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCC-hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC
Confidence 9 998764432110 0 0000000 0000000 000000000000 000111234678999999999999999
Q ss_pred hhhHHH
Q 009274 155 LTNVWK 160 (538)
Q Consensus 155 ~~~~~~ 160 (538)
+.++.+
T Consensus 339 a~e~L~ 344 (398)
T 4b99_A 339 AAAALR 344 (398)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 887654
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=1.6e-12 Score=125.45 Aligned_cols=237 Identities=13% Similarity=0.114 Sum_probs=161.0
Q ss_pred CcEEEEEEc--CCEEEEEeCC------------------------CcEEEEeCCCCceEEEEe-cCCcCeEEEEEecCCC
Q 009274 253 DCVTGLAVG--GGFLFSSSFD------------------------KSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQ 305 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~d------------------------g~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~ 305 (538)
+.+.+++++ |+++++.+.+ ++|.+||..+++.+..+. ++-.....+++.+++.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 557777777 6666666655 579999999998877665 3446789999998655
Q ss_pred CEEEEEcCCCcEEEEEccCCCCCcceeeecc-------cCCceeeeEEEEee-cCCEEEEee-CCCcEEEEECCCCceeE
Q 009274 306 PLCISGDSGGGIFVWSFSFPLGHEPLKKWNE-------EKDWRYSGIHALTT-SGRYLYTGS-GDRTIKAWSLLDGTLSC 376 (538)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~l~sg~-~dg~i~iwd~~~~~~~~ 376 (538)
++++...++.|++||...... .+..+.. ........-+++++ +++.+++.+ .++.|++|| .+++.+.
T Consensus 104 -l~v~d~~~~~v~~~~~~g~~~--~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 104 -YWVTDVALHQVFKLDPHSKEG--PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp -EEEEETTTTEEEEECTTCSSC--CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred -EEEEECCCCEEEEEeCCCCeE--EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 888888899999999754311 1111110 11111223457888 677777776 689999999 5677777
Q ss_pred EecC----------CCCCeEEEEEe-C-C-EEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC------CCC
Q 009274 377 TMSG----------HKSAVSTLAVC-N-G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA------VQH 437 (538)
Q Consensus 377 ~~~~----------h~~~v~~l~~~-~-~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 437 (538)
.+.. +-.....++++ + + ++++...++.|++||..+++.+..+.....+.....++++| +++
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 6632 22347899998 3 4 55556678899999999899888886443333333467888 333
Q ss_pred EEEEEeCCCcEEEEeC--Ccceeee---ccccceEEEEEe--CCCEEEEEeCCCeEEEEecCC
Q 009274 438 TLVVSHESGSIKVWRN--DKFMKSM---QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (538)
Q Consensus 438 ~l~~~~~dg~i~iwd~--~~~~~~~---~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~ 493 (538)
..++...+..|++||. ++.+..+ ..+.....++++ +|.++++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 2223334558999994 3455555 355566777766 787888888899999999864
No 184
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.57 E-value=2.8e-16 Score=162.07 Aligned_cols=113 Identities=24% Similarity=0.215 Sum_probs=80.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+|+.+.+... +++.+|||.|||||++ .| ..|+.++|||||||+||+||+|+ |
T Consensus 294 ~~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~------~~---------~~y~~~~DiWSlGvilyeml~G~~P 355 (573)
T 3uto_A 294 NELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVA------EG---------KPVGYYTDMWSVGVLSYILLSGLSP 355 (573)
T ss_dssp CCEEECCCSSCEECCTTSE---EEEECSSGGGCCHHHH------TT---------CCBCHHHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEeeccceeEccCCCc---eeeeEECccccCHHHh------CC---------CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 457888 88888876643 5678999999999999 54 56889999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.+...+. .+. ... ....... .......+.+++.+||.++|.+||++.++.+
T Consensus 356 f~~~~~~~~~~~i~-~~~-----~~~~~~~------------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 356 FGGENDDETLRNVK-SCD-----WNMDDSA------------FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SCCSSHHHHHHHHH-TTC-----CCCCSGG------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCcCHHHHHHHHH-hCC-----CCCCccc------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 9886554222 110 000 0000000 0111123678999999999999999887755
No 185
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.57 E-value=7.8e-12 Score=123.01 Aligned_cols=288 Identities=14% Similarity=0.081 Sum_probs=185.0
Q ss_pred eeEEeecCCeEEEEEeecC---------CCcE-EEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEec
Q 009274 233 DLVNGLSKGNVKFKDLQGH---------RDCV-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVD 302 (538)
Q Consensus 233 ~~~~~~~~~~~~i~~l~~h---------~~~V-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 302 (538)
.+..-..+....+|..... ...+ ..+...++.++.++.++.|..+|.++|+.+................
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~- 142 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS- 142 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-
Confidence 3433333333456666542 2233 3445558899999999999999999999998877554322222222
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC
Q 009274 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK 382 (538)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~ 382 (538)
+ ..++.++.++.+..+|..+++................ .......+..+++++.++.+..+|..+++.++......
T Consensus 143 -~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~--~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 143 -D-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG--ESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp -T-TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC--CCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC
T ss_pred -C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC--CCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEeccc
Confidence 2 3667788899999999987764433322111000000 00111225678889999999999999999988775321
Q ss_pred CC----------e-EEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEE
Q 009274 383 SA----------V-STLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW 451 (538)
Q Consensus 383 ~~----------v-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iw 451 (538)
.. + ......++.++.++.++.+..+|.++++.+...... . .. ....++..+++++.++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~-~~---~~~~~~~~l~~~~~~g~l~~~ 292 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--S-VN---DFIVDGNRIYLVDQNDRVMAL 292 (376)
T ss_dssp -----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--C-EE---EEEEETTEEEEEETTCCEEEE
T ss_pred CCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--C-CC---CceEECCEEEEEcCCCeEEEE
Confidence 10 1 122334788999999999999999999988776532 1 22 122346788888899999999
Q ss_pred eCCc--ceeeec-cccceEEEEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECC
Q 009274 452 RNDK--FMKSMQ-THKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCAD 528 (538)
Q Consensus 452 d~~~--~~~~~~-~h~~~v~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 528 (538)
|..+ ...... ............+..|+.++.+|.++++|..+++.......... .........++.|++++.+
T Consensus 293 d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~----~~~~~~~~~~~~l~v~~~~ 368 (376)
T 3q7m_A 293 TIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSS----GFQTEPVAADGKLLIQAKD 368 (376)
T ss_dssp ETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTT----CBCSCCEEETTEEEEEBTT
T ss_pred ECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCC----cceeCCEEECCEEEEEeCC
Confidence 9543 333333 11222223334677899999999999999999987765543211 1122223358899999999
Q ss_pred CeEEEEE
Q 009274 529 RTVKVYY 535 (538)
Q Consensus 529 g~v~vw~ 535 (538)
|.|..|+
T Consensus 369 G~l~~~~ 375 (376)
T 3q7m_A 369 GTVYSIT 375 (376)
T ss_dssp SCEEEEE
T ss_pred CEEEEEe
Confidence 9999987
No 186
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.56 E-value=9.7e-16 Score=157.23 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=74.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+.... ..+++|||.|||||++ .+ ...|+.++|+|||||+|||||+|+
T Consensus 328 ~G~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl------~~--------~~~y~~~vDiWSLGvilYEmLtG~~ 389 (689)
T 3v5w_A 328 HGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVL------QK--------GVAYDSSADWFSLGCMLFKLLRGHS 389 (689)
T ss_dssp TSCEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHH------ST--------TCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEecccceeeecCCCC----CCCccCCcCccCHHHH------hC--------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4568999 8888877553 4578999999999999 32 135889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.+....... .. ........ ...+ .....+.+++.+||.++|.+|+..
T Consensus 390 PF~~~~~~~~~--------------~i----~~~i~~~~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 390 PFRQHKTKDKH--------------EI----DRMTLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp TTCGGGCCCHH--------------HH----HHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred CCCCCChHHHH--------------HH----HHhhcCCC-CCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 99875433100 00 00000000 0011 112347889999999999999984
No 187
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.54 E-value=2.7e-15 Score=145.57 Aligned_cols=46 Identities=33% Similarity=0.435 Sum_probs=37.8
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccch
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~ 91 (538)
+++.+|||.|||||++ .| ...++.++|||||||+||||+||+ ||.+
T Consensus 203 ~~~~~GT~~Y~APE~l------~~--------~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 203 VAPRAGTPGFRAPEVL------TK--------CPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp ---CCCCGGGCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccCccccCHHHH------cC--------CCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 3467999999999999 44 234789999999999999999999 9954
No 188
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=4.6e-12 Score=136.27 Aligned_cols=265 Identities=12% Similarity=0.064 Sum_probs=161.6
Q ss_pred eeeeccCcceeEEeecCCeEEEEEe---------ecCCCc-----EEEEEEc--CCEEEEEeCC---------CcEEEEe
Q 009274 224 QARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDC-----VTGLAVG--GGFLFSSSFD---------KSIHVWS 278 (538)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~l---------~~h~~~-----V~~l~~~--~~~l~s~s~d---------g~i~iwd 278 (538)
.+..++++..++++ ++.+.+|++ .+|... ...++|+ |++|+.++.+ +.+.+||
T Consensus 21 ~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 45555666555554 667777763 444432 2346778 8999998876 5667999
Q ss_pred CCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCc---------------eee
Q 009274 279 LKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW---------------RYS 343 (538)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---------------~~~ 343 (538)
+.+++.. .+..|...+...+|||++..++.+ .|+.|++||+.++....... ...... ...
T Consensus 99 ~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~--~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 99 LNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITW--TGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp TTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCS--CCBTTTEEESBCCHHHHHHTSSSS
T ss_pred CCCCcEE-EcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcC--CCCccceecCcccccccchhcCCC
Confidence 9998754 466778889999999988876444 46899999988654322111 111110 011
Q ss_pred eEEEEeecCCEEEEeeCCC------------------------------------cEEEEECCC---Cc--eeEEec---
Q 009274 344 GIHALTTSGRYLYTGSGDR------------------------------------TIKAWSLLD---GT--LSCTMS--- 379 (538)
Q Consensus 344 ~~~~~~~~~~~l~sg~~dg------------------------------------~i~iwd~~~---~~--~~~~~~--- 379 (538)
....++|||+.|+.++.|. .|++||+.+ ++ ....+.
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 2358999999888875332 588899988 73 222333
Q ss_pred ---CCCCCeEEEEEe-CC-EEEEEec----CCcEEEEECCCCc----e---eEEEecCCCCceE----EEEEEcCCCCEE
Q 009274 380 ---GHKSAVSTLAVC-NG-VLYSGSR----DGTIRLWSLSDHS----L---LTVLEEDSSGAVS----SVLSLTAVQHTL 439 (538)
Q Consensus 380 ---~h~~~v~~l~~~-~~-~l~s~s~----dg~i~iwd~~~~~----~---~~~~~~~~~~~~~----~~~~~~~~~~~l 439 (538)
+|...+..++|+ ++ .++.... +..|.+||+.+++ + ...+...+...+. ....|+|||+.+
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 377889999999 44 3444332 3369999999887 2 1111111222111 125799999987
Q ss_pred E-EEe-CCC--cEEEEeCC-cceeeeccccceEEEE-EeCCCEEEEEeCC-----CeEEEE--ecCCCe
Q 009274 440 V-VSH-ESG--SIKVWRND-KFMKSMQTHKGSVFAV-FLEGKWLFTGGWD-----KTVSVQ--ELAGDE 495 (538)
Q Consensus 440 ~-~~~-~dg--~i~iwd~~-~~~~~~~~h~~~v~~~-~~~~~~l~sgs~d-----g~v~iw--d~~~~~ 495 (538)
+ ..+ .+| .|++||.. .....+......+..+ .++++.|+..+.. +...|| ++.++.
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred EEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 7 555 344 56777744 3334444444455544 3677766655543 344555 444443
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.53 E-value=2.3e-12 Score=125.94 Aligned_cols=255 Identities=8% Similarity=0.046 Sum_probs=165.3
Q ss_pred CCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc---------CCCcEEEEEccCCCCCcceeeecccC-C
Q 009274 270 FDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK-D 339 (538)
Q Consensus 270 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~-~ 339 (538)
.|+.|.+||..+++.+..+..+..+ .++|+|++..++++.. .++.|.+||..+.+....+....... .
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999999888877665 8999997765555442 36789999988665444443221110 0
Q ss_pred ceeeeEEEEeecCCEEEEeeC--CCcEEEEECCCCceeEE-ecCCCCCeEEEEEe---CCEEEEEecCCcEEEEECCC-C
Q 009274 340 WRYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD-H 412 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~-~ 412 (538)
.......+++++|++|+++.. +++|.+||+.+++.+.. +.. .+ ...+.+. +..+++.+.||.+.+|+... +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 011224589999999988864 58999999999988887 653 22 2223344 24788899999999999865 5
Q ss_pred ceeEEEec-----CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc----eeeecc------------ccceEEEEE
Q 009274 413 SLLTVLEE-----DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----MKSMQT------------HKGSVFAVF 471 (538)
Q Consensus 413 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~------------h~~~v~~~~ 471 (538)
+....... ....... +..++++..++..+.++.+.++|.... ...+.. .......++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIF--IAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBC--SCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred cEeeeccccceEcCCCCceE--EEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 54422210 0011111 234567777777888999999996421 111110 001124566
Q ss_pred eCCCEEEEEeC-----------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE-EEEEECCCeEEEEEcC
Q 009274 472 LEGKWLFTGGW-----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKVYYYG 537 (538)
Q Consensus 472 ~~~~~l~sgs~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~v~vw~~~ 537 (538)
++++.++++.. ++.|.+||+.+.+........ . +....+.++++ |++++. +.|.+||..
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-----~-p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-----D-ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-----T-CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-----C-eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 78777776543 358999999999876655432 2 44555666665 666665 999999975
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=5.5e-10 Score=105.55 Aligned_cols=282 Identities=10% Similarity=0.026 Sum_probs=178.1
Q ss_pred CeEEEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEE-ecCCcCeEEEEEecCCCCEEEEEcCCCcE
Q 009274 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (538)
Q Consensus 241 ~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 317 (538)
+.+..+.+..+...+.+++++ |+.+++...++.|.+||.. ++..... ..+...+.++++.+++ .++++...++.|
T Consensus 3 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i 80 (299)
T 2z2n_A 3 FKLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKI 80 (299)
T ss_dssp EEEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEE
T ss_pred ceEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeE
Confidence 344556677777889999998 6666665557899999988 5543322 2345778999998754 566777778889
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CC-E
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NG-V 394 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~-~ 394 (538)
..||... . ...+............++.++++..++...++.|..||. +++.... ...+...+.+++++ ++ +
T Consensus 81 ~~~~~~g-~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 81 GRITKKG-I----IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL 154 (299)
T ss_dssp EEECTTS-C----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred EEECCCC-c----EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE
Confidence 9998751 1 122211111112223466677877777777889999998 5554332 23345678899998 44 5
Q ss_pred EEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeee--ccccceEEEEEe
Q 009274 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL 472 (538)
Q Consensus 395 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~h~~~v~~~~~ 472 (538)
+++...++.|..||. +++........ .......+++++++++.++...++.|..||.......+ ..+...+.++.+
T Consensus 155 ~v~~~~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~ 232 (299)
T 2z2n_A 155 WFTENQNNAIGRITE-SGDITEFKIPT-PASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITA 232 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEE
T ss_pred EEEeCCCCEEEEEcC-CCcEEEeeCCC-CCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEE
Confidence 555556789999999 66654321211 12223347889999977776678899999974333332 224456777776
Q ss_pred --CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 473 --~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
+|+.+++...++.|..||.. +......... .......+..+++.++.++..+.|..++..
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~----~~~~~~~i~~~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQI----KSAEPHGICFDGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEETT-TEEEEEECSS----SSCCEEEEEECSSCEEEEETTTEEEEEEEC
T ss_pred CCCCCEEEeccCCceEEEECCC-CceEEEeCCC----CCCccceEEecCCCEEEEecCCcEEEEEcC
Confidence 67766665578899999984 4433221111 112233333377888887766777777654
No 191
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.51 E-value=1.2e-12 Score=140.81 Aligned_cols=234 Identities=7% Similarity=-0.006 Sum_probs=149.1
Q ss_pred EEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcC-----eEEEEEecCCCCEEEEEcCC---------CcEE
Q 009274 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK-----VMAVVYVDEDQPLCISGDSG---------GGIF 318 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~s~~~d---------g~i~ 318 (538)
..+++|+ +++++++ |++|++||+.+++....+.+|... ...+.|+|++.. ++.++.+ +.+.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQF-ILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSE-EEEEEEEEECSSSCEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCE-EEEEECCeeeEEEccceEEE
Confidence 4578898 6667665 999999999999988888877643 234788997664 4555554 6678
Q ss_pred EEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCe------------
Q 009274 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAV------------ 385 (538)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v------------ 385 (538)
+||+.+++.... ..+.. .....+++|||+.|+.+. |+.|++||+.+++..+. ..++...+
T Consensus 96 ~~d~~~~~~~~l----~~~~~--~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 96 IYDLNKRQLITE----ERIPN--NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEETTTTEECCS----SCCCT--TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred EEECCCCcEEEc----ccCCC--cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 999987653321 11111 123458999999998884 68999999988775442 22333222
Q ss_pred -----EEEEEe--CCEEEEEecCC------------------------------------cEEEEECCC---Cc--eeEE
Q 009274 386 -----STLAVC--NGVLYSGSRDG------------------------------------TIRLWSLSD---HS--LLTV 417 (538)
Q Consensus 386 -----~~l~~~--~~~l~s~s~dg------------------------------------~i~iwd~~~---~~--~~~~ 417 (538)
..+.|+ ++.|+.++.|. +|++||+.+ ++ ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 348899 44777765332 488899988 73 2223
Q ss_pred EecC----CCCceEEEEEEcCCCCEEEEEeC----CCcEEEEeCC--c----c--eeee--ccccceEE-----E--EEe
Q 009274 418 LEED----SSGAVSSVLSLTAVQHTLVVSHE----SGSIKVWRND--K----F--MKSM--QTHKGSVF-----A--VFL 472 (538)
Q Consensus 418 ~~~~----~~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~--~----~--~~~~--~~h~~~v~-----~--~~~ 472 (538)
+... ........++|+|||+.++.... +..|.+||.. + + ...+ ..|...+. . .++
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 3221 02223444689999997665533 3368999843 3 1 1222 34554433 3 345
Q ss_pred CCCEEE-EEeC-C--CeEEEEecCCCeeEe
Q 009274 473 EGKWLF-TGGW-D--KTVSVQELAGDEFEE 498 (538)
Q Consensus 473 ~~~~l~-sgs~-d--g~v~iwd~~~~~~~~ 498 (538)
||+.|+ ..+. + ..|++||+.+++...
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 998877 6654 3 358888988776543
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.51 E-value=1.1e-11 Score=120.34 Aligned_cols=254 Identities=8% Similarity=0.037 Sum_probs=155.5
Q ss_pred EEEEEEcCCEEEEE---------eCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC--Cc--EEEEE
Q 009274 255 VTGLAVGGGFLFSS---------SFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GG--IFVWS 321 (538)
Q Consensus 255 V~~l~~~~~~l~s~---------s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d--g~--i~vwd 321 (538)
+...+++|++++.. +.++.|.+||+.+++... + ..+..++|+|++..++++...+ +. |.+||
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 44444465555543 236789999998877543 3 5688999999877665554432 33 77777
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC---------------------------CcEEEEECCCCce
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD---------------------------RTIKAWSLLDGTL 374 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------------------------g~i~iwd~~~~~~ 374 (538)
+.++.... +.. .. . .....++|+++.|+.++.+ ..|++||+.+++.
T Consensus 92 ~~~g~~~~-l~~---~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 92 LETLSSKK-ILE---AK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp TTTTEEEE-EEE---ES--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred CCCCceEE-EEc---CC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 76543211 111 11 1 3345789999988877632 5799999998877
Q ss_pred eEEecCCCCCeEEEEEe-CCEEEEEecCC-------cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC-
Q 009274 375 SCTMSGHKSAVSTLAVC-NGVLYSGSRDG-------TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES- 445 (538)
Q Consensus 375 ~~~~~~h~~~v~~l~~~-~~~l~s~s~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 445 (538)
+..+.. . .+..++|+ +++++++..+. ...+|.+.+++. ..+..+ ... ..++|+|+.|+.++.+
T Consensus 165 ~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--~~~---~~~spdg~~l~~~~~~~ 236 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK--VSF---YAVDSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE--ESE---EEEEECSSCEEEEECCS
T ss_pred EeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC--cce---eeECCCCCEEEEEEccc
Confidence 455544 3 78899999 44666665542 334444444443 333332 222 2349999988877754
Q ss_pred -------CcEEEEeCCcceeeeccccceEEE-EEe-CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEE
Q 009274 446 -------GSIKVWRNDKFMKSMQTHKGSVFA-VFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALL 516 (538)
Q Consensus 446 -------g~i~iwd~~~~~~~~~~h~~~v~~-~~~-~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (538)
..|.+||.++.......|...+.. +.| ++ ++++++.++.+++| +.+++....... ...+..+.
T Consensus 237 ~~~~~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~-~~~g~~~~~~~~------~~~v~~~~ 308 (347)
T 2gop_A 237 KKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLY-IWDGEIKPIAKG------RHWIMGFD 308 (347)
T ss_dssp SSCCCSSCEEEEECSSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEE-EESSSEEEEECS------SSEEEEEE
T ss_pred cCCccccceEEEECCCceEeccccCCcccCCccEEcCc-EEEEEecCCcEEEE-EcCCceEEEecC------CCeEEeee
Confidence 368888833333334456677775 666 56 88899999999999 875544322221 22344444
Q ss_pred EeCCEEEEEECCCeE-EEEEc
Q 009274 517 YWQGKLFVGCADRTV-KVYYY 536 (538)
Q Consensus 517 ~~~~~l~sg~~dg~v-~vw~~ 536 (538)
+.+..+++++.++.. .+|.+
T Consensus 309 ~s~~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 309 VDEIVVYLKETATRLRELFTW 329 (347)
T ss_dssp ESSSEEEEEECSSSCCEEEEE
T ss_pred eeCcEEEEEcCCCChHHheEe
Confidence 444556677777655 77764
No 193
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.50 E-value=1.6e-14 Score=141.58 Aligned_cols=130 Identities=14% Similarity=0.121 Sum_probs=86.8
Q ss_pred eeeeeec--cccccccccchhhh-----hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVGLF-----LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSL 83 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~l 83 (538)
+..+|+. |+|+.+........ ....+||+.|||||++ .+ ..+++++|||||||+||+|
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el 254 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH------NG---------VAPSRRGDLEILGYCMIQW 254 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh------CC---------CCCCchhhHHHHHHHHHHH
Confidence 3567888 67776654432111 1346699999999999 44 5678999999999999999
Q ss_pred hhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh--cCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 84 LIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF--GSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 84 ltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+||+ ||.+....... ............+....... ......+.+++.+|++.+|.+||+..++.+
T Consensus 255 ~~g~~Pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 255 LTGHLPWEDNLKDPKY------------VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHSCCTTGGGTTCHHH------------HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HhCCCCccccccCHHH------------HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 9999 99874322100 00111111122222222211 223345889999999999999999999998
Q ss_pred HHHHhhc
Q 009274 161 CIRELII 167 (538)
Q Consensus 161 ~l~~l~~ 167 (538)
.+..++.
T Consensus 323 ~l~~~~~ 329 (364)
T 3op5_A 323 ILLQGLK 329 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887763
No 194
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.50 E-value=2.3e-11 Score=119.70 Aligned_cols=267 Identities=12% Similarity=0.094 Sum_probs=175.7
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCC---------cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD---------HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 258 l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~---------~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
....++.++.++.++.|..+|.++++.+..+.... ..+.+.... .+..++.++.++.|..+|..+++..
T Consensus 49 p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 49 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred cEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 34458888999999999999999999998876532 223222222 2335677888999999999877644
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-----EEEEEeCCEEEEEecCCc
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-----STLAVCNGVLYSGSRDGT 403 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~l~s~s~dg~ 403 (538)
......... .... ...+..+++++.++.|..+|..+++.++......... ......++.++.++.++.
T Consensus 127 W~~~~~~~~---~~~p----~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 127 WQTKVAGEA---LSRP----VVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGR 199 (376)
T ss_dssp EEEECSSCC---CSCC----EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTE
T ss_pred EEEeCCCce---EcCC----EEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCE
Confidence 332221110 1111 1235678888999999999999999988876433221 233444788899999999
Q ss_pred EEEEECCCCceeEEEecCCCCceE---EE--EEEc--CCCCEEEEEeCCCcEEEEeCCcceeeeccccceEEEEEeCCCE
Q 009274 404 IRLWSLSDHSLLTVLEEDSSGAVS---SV--LSLT--AVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGKW 476 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~---~~--~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~h~~~v~~~~~~~~~ 476 (538)
+..+|..+++.+............ .. .... ..+..+++++.++.+..+|..+-...+.........+..++..
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~ 279 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNR 279 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEETTE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEECCE
Confidence 999999999988777643211000 00 0001 1256788888899999999654322232223344555567888
Q ss_pred EEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 477 LFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 477 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++.++.++.+..+|..+++.......... .........++.+++++.+|.|..+|..
T Consensus 280 l~~~~~~g~l~~~d~~tG~~~w~~~~~~~----~~~~~~~~~~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVTLWTQSDLLH----RLLTSPVLYNGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp EEEEETTCCEEEEETTTCCEEEEECTTTT----SCCCCCEEETTEEEEECTTSEEEEEETT
T ss_pred EEEEcCCCeEEEEECCCCcEEEeecccCC----CcccCCEEECCEEEEEeCCCeEEEEECC
Confidence 99999999999999999987765542211 1122223357899999999999999864
No 195
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.49 E-value=1.7e-14 Score=140.24 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=82.1
Q ss_pred eeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 13 VAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
..|+. |+++.+....... ......||+.|||||++ .+ ..++.++|||||||+||+|+|
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH------KG---------VALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH------HT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHh------cC---------CCCCchhhHHHHHHHHHHHHh
Confidence 67888 6676664432110 12467999999999999 44 467899999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc--CccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG--SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
|+ ||......... ............+.......+ .....+.+++.+||..+|.+||++.++.+.+
T Consensus 256 g~~pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 256 GKLPWEQNLKDPVA------------VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp SSCTTGGGTTCHHH------------HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CCCCccccccccHH------------HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 99 99763222000 001111111111111111111 2334588999999999999999999998877
Q ss_pred HHh
Q 009274 163 REL 165 (538)
Q Consensus 163 ~~l 165 (538)
..+
T Consensus 324 ~~~ 326 (345)
T 2v62_A 324 NPH 326 (345)
T ss_dssp CTT
T ss_pred hcc
Confidence 664
No 196
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.49 E-value=8e-15 Score=146.82 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=79.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.+..|+. |+|+.+...... ..+.+||+.|||||++ .+ ..+++++|||||||+||+|++|.
T Consensus 149 ~~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~APE~l------~~---------~~~~~~~DIwSlGvilyell~G~~ 211 (444)
T 3soa_A 149 GAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVL------RK---------DPYGKPVDLWACGVILYILLVGYP 211 (444)
T ss_dssp TCCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEccCceeEEecCCCce--eecccCCcccCCHHHh------cC---------CCCCCccccHHHHHHHHHHHhCCC
Confidence 3567888 667666654332 4578999999999999 44 56889999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+. .+. ......+..........+.+++.+||..+|.+||++.++.+
T Consensus 212 Pf~~~~~~~~~~~i~------------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 212 PFWDEDQHRLYQQIK------------------AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp SCCCSSHHHHHHHHH------------------HTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCccHHHHHHHHH------------------hCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99875444211 000 00000000111122234788999999999999999987765
No 197
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.48 E-value=2.1e-14 Score=138.72 Aligned_cols=125 Identities=12% Similarity=0.065 Sum_probs=84.1
Q ss_pred eeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 13 VAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
++|+. |+++...+..... .....+||+.|||||++ .+ ..++.++|||||||+||+|++
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~ 212 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH------LG---------KEQSRRDDLEALGHMFMYFLR 212 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHH------cC---------CCCCchhHHHHHHHHHHHHhc
Confidence 37888 6666654432210 02468999999999999 44 567899999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
|+ ||.+..... ...............+........+.+.+++.+||+.+|.+||+..++.+.+..
T Consensus 213 g~~Pf~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 213 GSLPWQGLKADT--------------LKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp SSCTTTTCCCSS--------------HHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred CCCCcccccccc--------------HHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 99 998753221 111111111111111112222233478899999999999999999999888877
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
+.
T Consensus 279 ~~ 280 (330)
T 2izr_A 279 LF 280 (330)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 198
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.48 E-value=1.1e-11 Score=121.04 Aligned_cols=244 Identities=11% Similarity=0.052 Sum_probs=157.9
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCceEEEEecC------CcCeEEEEEecCCCC
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH------DHKVMAVVYVDEDQP 306 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~ 306 (538)
+..+..+..+ .++++ ++++++++ .+++|.+||..+++.+.++... ......++++|++..
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 4556666655 88998 88888886 3678999999999998888643 234667899997775
Q ss_pred EEEEEcC-CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCC-CceeE------E
Q 009274 307 LCISGDS-GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLD-GTLSC------T 377 (538)
Q Consensus 307 ~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~-~~~~~------~ 377 (538)
++++... ++.|.+||+.+.+....+ ..... . . ...+.|++ ..+++.+.||.+.+|+... ++... .
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~--i~~~~--~-~-~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~ 195 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDV--TAAAG--C-W-SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM 195 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEE--GGGTT--E-E-EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEE--ecCCC--c-c-eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence 5555443 789999999876332210 11111 0 0 12355655 5788888999999999865 55441 1
Q ss_pred ecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCcee--EEEecCC-----CCceEE---EEEEcCCCCEEEEEeC-
Q 009274 378 MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL--TVLEEDS-----SGAVSS---VLSLTAVQHTLVVSHE- 444 (538)
Q Consensus 378 ~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~-----~~~~~~---~~~~~~~~~~l~~~~~- 444 (538)
+..+..++ .+.+. +..++..+.++.+.++|+...... ..+.... ...... .++++++++.++++..
T Consensus 196 ~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~ 274 (361)
T 2oiz_A 196 FSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHP 274 (361)
T ss_dssp SCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEES
T ss_pred EcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEcc
Confidence 22222222 11112 446666778899999999765422 2221100 000000 1578999888877653
Q ss_pred ----------CCcEEEEeC--CcceeeeccccceEEEE--EeCCCEEEEEeCCCeEEEEecCCC--eeEeee
Q 009274 445 ----------SGSIKVWRN--DKFMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTVSVQELAGD--EFEEDV 500 (538)
Q Consensus 445 ----------dg~i~iwd~--~~~~~~~~~h~~~v~~~--~~~~~~l~sgs~dg~v~iwd~~~~--~~~~~~ 500 (538)
++.|.+||. .+.+..+..+. ..++ +++|++|++++. +.|.+||..++ +.....
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred CCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 347999995 45667777666 5555 459999998887 99999999999 765554
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=3.4e-11 Score=114.15 Aligned_cols=239 Identities=13% Similarity=0.052 Sum_probs=160.6
Q ss_pred EEeecCCCcEEEEEEc--CC-EEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 246 KDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
..+..+.....+++|+ ++ +++++..++.|..||..++ ...+..+...+.++++.+++ .++++...++.|.+||.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcC
Confidence 3355566778899998 66 7888888999999999877 66777788889999998855 47677777789999998
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEE----ee-------------CCCcEEEEECCCCceeEEecCCCCCe
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT----GS-------------GDRTIKAWSLLDGTLSCTMSGHKSAV 385 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----g~-------------~dg~i~iwd~~~~~~~~~~~~h~~~v 385 (538)
.++............ ........+++++|+++++ |+ ..+.|..+|.. ++ ...+..+....
T Consensus 98 ~~g~~~~~~~~~~~~-~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGK-KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTE-ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred CCCcEEEEeeccCCC-CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 665432211111110 0011123577889988877 33 13466666655 44 34445566778
Q ss_pred EEEEEe--CCEEEEEecCCcEEEEECC-CCce---eEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-ccee
Q 009274 386 STLAVC--NGVLYSGSRDGTIRLWSLS-DHSL---LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMK 458 (538)
Q Consensus 386 ~~l~~~--~~~l~s~s~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~ 458 (538)
..++|+ ++.+++.+.++.|.+||+. +++. ...+ ........ .++++++|++.++. ++.|.+||.. +.+.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~-~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTD-GLRVDAGGLIWASA--GDGVHVLTPDGDELG 250 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCC-SEEEBTTSCEEEEE--TTEEEEECTTSCEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCC-eEEECCCCCEEEEc--CCeEEEECCCCCEEE
Confidence 999998 4466777778999999997 5554 2333 22222222 26899999866665 7899999954 4556
Q ss_pred eeccccceEEEEEe---CCCEEEEEeCCCeEEEEecCCCee
Q 009274 459 SMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEF 496 (538)
Q Consensus 459 ~~~~h~~~v~~~~~---~~~~l~sgs~dg~v~iwd~~~~~~ 496 (538)
.+..+.. +.++.+ +++.|++++.+ .+.-++..+.++
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 6666666 777766 66788888876 455566666654
No 200
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.47 E-value=1.7e-14 Score=138.90 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=83.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+|+.+............+||+.|||||++ .+. ......++.++|||||||+||+|+||+ |
T Consensus 168 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~----~~~~~~~~~~~DiwslG~il~el~tg~~p 237 (322)
T 3soc_A 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL------EGA----INFQRDAFLRIDMYAMGLVLWELASRCTA 237 (322)
T ss_dssp CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHH------TTC----CCCCHHHHHHHHHHHHHHHHHHHHTTBTT
T ss_pred CeEEEccCCcccccccccCccccccCccCccccCHhhc------ccc----cccCcCCCccchhHHHHHHHHHHHhCCCC
Confidence 468888 667666554433234458999999999999 330 001245667899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCc----------cchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSE----------FVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.+........... .....+.... ....... ..... ...+.+++.+||+.+|.+||++.+
T Consensus 238 f~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 308 (322)
T 3soc_A 238 ADGPVDEYMLPFEE--------EIGQHPSLED-MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC 308 (322)
T ss_dssp SSSCCCCCCCTTHH--------HHCSSCCHHH-HHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCcchhccchhh--------hhccCCchhh-hhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHH
Confidence 98753331110000 0000000000 1111100 00000 112788999999999999999999
Q ss_pred HHHHHHHhh
Q 009274 158 VWKCIRELI 166 (538)
Q Consensus 158 ~~~~l~~l~ 166 (538)
+.+.+.++.
T Consensus 309 ll~~L~~l~ 317 (322)
T 3soc_A 309 VGERITQMQ 317 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887764
No 201
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.47 E-value=3.6e-14 Score=134.83 Aligned_cols=128 Identities=10% Similarity=0.044 Sum_probs=84.5
Q ss_pred eeeeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSL 83 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~l 83 (538)
+...|+. |+++......... ......||+.|||||++ .+ ..+++++|||||||+||+|
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l 208 (296)
T 3uzp_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH------LG---------IEQSRRDDLESLGYVLMYF 208 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEeeCCCcccccccccccccccccccccccccccCChhhh------cC---------CCCCcchhhHHHHHHHHHH
Confidence 3457888 5566655443210 12467999999999999 44 5678999999999999999
Q ss_pred hhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 84 LIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 84 ltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
++|+ ||....... ...............+.... ......+.+++.+||+.+|.+||++.++.+.
T Consensus 209 ~~g~~pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 209 NLGSLPWQGLKAAT--------------KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHSSCTTSSCCCSS--------------SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred HhCCCCCCCcCchh--------------hhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9999 998643220 00011111111111111111 1223358899999999999999999999998
Q ss_pred HHHhhc
Q 009274 162 IRELII 167 (538)
Q Consensus 162 l~~l~~ 167 (538)
+.++..
T Consensus 275 l~~~~~ 280 (296)
T 3uzp_A 275 FRNLFH 280 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888763
No 202
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.47 E-value=3.3e-14 Score=135.24 Aligned_cols=125 Identities=10% Similarity=-0.031 Sum_probs=82.4
Q ss_pred eeeec--cccccccccchh-----hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 13 VAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
.+|+. |+++........ .......||+.|||||++ .+ ..+++++|||||||+||+|++
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~ 213 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH------LG---------REQSRRDDLEALGHVFMYFLR 213 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhh------cC---------CCCChHHHHHHHHHHHHHHHc
Confidence 47888 566655543221 013467899999999998 44 567899999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|+ ||....... ...............+.... ......+.+++.+||+.+|.+||+..++.+.+.
T Consensus 214 g~~pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 214 GSLPWQGLKAAT--------------NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp SSCTTSSCCSCC--------------HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred CCCCcchhhccc--------------cHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 99 998742220 00000011111111111111 122335889999999999999999999998888
Q ss_pred Hhh
Q 009274 164 ELI 166 (538)
Q Consensus 164 ~l~ 166 (538)
++.
T Consensus 280 ~~~ 282 (298)
T 1csn_A 280 KVL 282 (298)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 203
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.47 E-value=4e-14 Score=134.56 Aligned_cols=127 Identities=11% Similarity=0.068 Sum_probs=84.3
Q ss_pred eeeeeec--cccccccccchh-----hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSL 83 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~l 83 (538)
+...|+. |+++........ .......||+.|||||++ .+ ..+++++|||||||+||+|
T Consensus 144 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l 208 (296)
T 4hgt_A 144 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH------LG---------IEQSRRDDLESLGYVLMYF 208 (296)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHH------TT---------CCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHh------cC---------CCCCchhHHHHHHHHHHHH
Confidence 3557888 566665544221 012367999999999999 44 5678899999999999999
Q ss_pred hhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 84 LIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 84 ltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
++|+ ||......... .............+.... ......+.+++.+||+.+|.+||++.++.+.
T Consensus 209 ~~g~~pf~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 209 NLGSLPWQGLKAATKR--------------QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHSSCTTSSCCCSSSS--------------SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hcCCCCCcccchhhhh--------------hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 9999 99874333100 111111111111111111 1223358899999999999999999999998
Q ss_pred HHHhh
Q 009274 162 IRELI 166 (538)
Q Consensus 162 l~~l~ 166 (538)
+..+.
T Consensus 275 l~~~~ 279 (296)
T 4hgt_A 275 FRNLF 279 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88876
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=3e-11 Score=113.06 Aligned_cols=231 Identities=10% Similarity=0.029 Sum_probs=161.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCC-cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCc
Q 009274 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (538)
Q Consensus 262 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (538)
++.|++++.|+.|.+||.++|+.+..+..+. ..+.++.++|++. +++ +.++.|..||. +++....+.. ....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~---~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAA---PAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEEC---CTTC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcC---CCCc
Confidence 6789999999999999999999999999876 5788999998654 656 34678999987 5543333222 1111
Q ss_pred eeeeEEEEeecCCEEEEeeC-CCcEEEEECCCCceeEEecC------CCCCeEEEEEe--CCEEEEEecCCcEEEEECCC
Q 009274 341 RYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSG------HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD 411 (538)
Q Consensus 341 ~~~~~~~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~ 411 (538)
. .....+.++|+++++.+. ++.|..+|. +++.+..+.. +......+++. ++++++...++.|..||..
T Consensus 78 ~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 78 E-MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp E-EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred c-ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 1 223467789999998887 788888885 7887776642 11233444555 6688999999999999998
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccceeeecccc------ceEEEEEe--CCCEEEEEe
Q 009274 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHK------GSVFAVFL--EGKWLFTGG 481 (538)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~------~~v~~~~~--~~~~l~sgs 481 (538)
|+.+.++..... ... ....++++.+++++.++.|..+|. ++.+.++..+. ..+.++.. +|+.+++..
T Consensus 155 G~~~w~~~~~~~--~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLSGT--PFS-SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECSSC--CCE-EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCCC--ccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999988876422 222 466789999999988889999994 45666664332 12455544 788887774
Q ss_pred CC--------CeEEEEec-CCCeeEeeeecCCc
Q 009274 482 WD--------KTVSVQEL-AGDEFEEDVIPTGA 505 (538)
Q Consensus 482 ~d--------g~v~iwd~-~~~~~~~~~~~~~~ 505 (538)
.. +..+++++ .++++.+.+.....
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~ 264 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVK 264 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEECCTTT
T ss_pred cCccccccccCCceEEEECCCCCEEEEecCccc
Confidence 21 23456666 46666666554443
No 205
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.46 E-value=3.8e-14 Score=135.42 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=73.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+++....... ......||+.|||||++ .+ ..+++++|||||||+||+|++|+ |
T Consensus 176 ~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~P 238 (309)
T 3p86_A 176 YTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVL------RD---------EPSNEKSDVYSFGVILWELATLQQP 238 (309)
T ss_dssp CCEEECCCC-------------------CCTTSCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHCCCT
T ss_pred CcEEECCCCCCcccccccc--ccccCCCCccccChhhh------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 467888 55655443322 24468999999999999 44 56788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
|.......+. .+..... .... .......+.+++.+||..+|.+||++.++.+.+..+..
T Consensus 239 f~~~~~~~~~~~~~~~~~-----~~~~---------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 239 WGNLNPAQVVAAVGFKCK-----RLEI---------------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp TTTSCHHHHHHHHHHSCC-----CCCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHhcCC-----CCCC---------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 9876444111 0000000 0000 00112247889999999999999999999998888763
No 206
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.46 E-value=1.2e-14 Score=141.63 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=76.7
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
-.|+. |+++.+.+... ....+|||.|||||++ .+ ..++.++|||||||++|+|++|. ||
T Consensus 157 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~~ll~g~~Pf 218 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIV------NY---------EPLGLEADMWSIGVITYILLSGASPF 218 (361)
T ss_dssp CEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEEecCCceEcCCCCc---cccCCCCccEECchHH------cC---------CCCCccccHHHHHHHHHHHHhCCCCC
Confidence 57888 66776665432 5578999999999999 43 56789999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+.+...+. .+. ... ..... +. .......+.+++.+||..+|.+||++.++.+
T Consensus 219 ~~~~~~~~~~~i~-~~~-----~~~~~----~~--------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 219 LGDTKQETLANIT-AVS-----YDFDE----EF--------FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCSSHHHHHHHHH-TTC-----CCCCH----HH--------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHH-hcC-----CCCCc----hh--------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 876544222 000 000 00000 00 0112223778999999999999999877654
No 207
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.46 E-value=1.2e-14 Score=137.93 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=74.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... .....+||+.|||||++ .+ ..+++++|||||||++|+|+||+ |
T Consensus 148 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~ll~g~~p 211 (294)
T 4eqm_A 148 KTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQA------KG---------EATDECTDIYSIGIVLYEMLVGEPP 211 (294)
T ss_dssp SCEEECCCSSSTTC--------------CCSSCCHHHH------HT---------CCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCcccccccccc-ccCccccCccccCHhHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCC
Confidence 457888 566665543221 13457899999999999 44 55778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc-hhhHHHHHHHhhc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWKCIRELII 167 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~-~~~~~~~l~~l~~ 167 (538)
|.+.......... .....+. .+..........+.+++.+||+++|.+||+ ..++.+.+..++.
T Consensus 212 f~~~~~~~~~~~~---------~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 212 FNGETAVSIAIKH---------IQDSVPN-------VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp SCSSCHHHHHHHH---------HSSCCCC-------HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCCChHHHHHHH---------hhccCCC-------cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 9876443111000 0000000 000111112234888999999999999995 5667776666553
No 208
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.45 E-value=1.7e-14 Score=139.09 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=76.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
-.|+. |+++.+..... ....+||+.|||||++ .+ ..+++++|||||||+||+|++|. ||
T Consensus 156 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~pf 217 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV------NY---------EPLGLEADMWSIGVITYILLSGASPF 217 (326)
T ss_dssp CEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEEECCCCeECCCCCc---cccccCCcCcCCceee------cC---------CCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence 57888 66666654322 4568999999999998 43 56789999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+.....+. .+. ... ...... ........+.+++.+||..+|.+||++.++.+
T Consensus 218 ~~~~~~~~~~~~~---------~~~-~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 218 LGDTKQETLANVS---------AVN-YEFEDE--------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCSSHHHHHHHHH---------HTC-CCCCHH--------HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHH---------hcC-CCcCcc--------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 875443111 000 000 000000 00112234778999999999999999887765
No 209
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.45 E-value=8.3e-12 Score=123.20 Aligned_cols=255 Identities=13% Similarity=0.044 Sum_probs=158.5
Q ss_pred EEEeCCCCceEEEEecCCcCeEE-----EEEecCCCCEEEEEcCCCc--EEEEEccCCCCCcceeeecccCCceeeeEEE
Q 009274 275 HVWSLKDFSHVHTFKGHDHKVMA-----VVYVDEDQPLCISGDSGGG--IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHA 347 (538)
Q Consensus 275 ~iwd~~~~~~~~~~~~h~~~v~~-----l~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (538)
..+|..++..+..+..|...... .+|+|++..+++++..+|. |.+||+.++....... .+.. ......
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~---~~~~--~~~~~~ 87 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE---GRGD--NTFGGF 87 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC---SSCB--CSSSCE
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee---CCCC--CccceE
Confidence 34577888888888888776666 8899987766666555774 7777877653322211 1111 111237
Q ss_pred EeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE--e--CCEEEEE----------------------ecC
Q 009274 348 LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV--C--NGVLYSG----------------------SRD 401 (538)
Q Consensus 348 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~s~----------------------s~d 401 (538)
++|+++.|+.++.++.|++||+.+++....+..+...+....| + +.+++.. ..+
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 9999999999999999999999999887777666666655554 3 3344432 244
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEeCC------CcEEEEeCC-cceeeecccc--ceEEEEE
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHES------GSIKVWRND-KFMKSMQTHK--GSVFAVF 471 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------g~i~iwd~~-~~~~~~~~h~--~~v~~~~ 471 (538)
..|.+||+.+++........ ... ....|+| +|+.|+....+ ..|.++|.. .....+..+. ..+....
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~--~~~-~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN--QWL-GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES--SCE-EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCC--ccc-cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 78999999998765444332 223 3368999 99988877753 378888853 3344444444 3455555
Q ss_pred e--CCCEEEEEeC-CC----eEEEEecCCCeeEeeeecCCcccC-CCceEEEEEeCCE-EEEE---------ECCCeEEE
Q 009274 472 L--EGKWLFTGGW-DK----TVSVQELAGDEFEEDVIPTGAIPC-GSVITALLYWQGK-LFVG---------CADRTVKV 533 (538)
Q Consensus 472 ~--~~~~l~sgs~-dg----~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-l~sg---------~~dg~v~v 533 (538)
| ||+.|+..+. ++ .|++||+.+++............. .......+.+|+. |+.. ..+..|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 5 8887765443 22 399999998875443222210000 0000013455554 4432 45678999
Q ss_pred EEcC
Q 009274 534 YYYG 537 (538)
Q Consensus 534 w~~~ 537 (538)
|++.
T Consensus 325 ~d~~ 328 (388)
T 3pe7_A 325 FNMK 328 (388)
T ss_dssp EETT
T ss_pred Eecc
Confidence 9975
No 210
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.45 E-value=1.4e-14 Score=138.39 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=76.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+|+...............||+.|||||++ .+ .....++.++|||||||+||+|++|+ |
T Consensus 169 ~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~elltg~~P 236 (307)
T 3lb7_A 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI------RM------QDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp SCEEECCCCSSCC------------CCCCTTSCCHHHH------HC------CSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEccCCCceecccccccccccCCCCCcceECccee------ec------cCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 566654433222234568999999999998 21 01255778999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
|...... .+.... . .....+ .+..........+.+++.+||+.+|.+||+..++.+.+..+.
T Consensus 237 f~~~~~~~~~~~~~-~-------~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 237 YSHINNRDQIIFMV-G-------RGYASP--------DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TTTCCCHHHHHHHH-H-------HTCCCC--------CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred CccCCcHHHHHHHH-h-------cCCCCc--------chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 9864322 000000 0 000000 000000112234788999999999999999999988877654
No 211
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.45 E-value=7.6e-11 Score=113.52 Aligned_cols=238 Identities=8% Similarity=0.036 Sum_probs=155.9
Q ss_pred CcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 253 DCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 253 ~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
.....+++. ++.+++...++.|.+||..+++.+.++.. ......+++++++ .++++...++.|.+||..+.+....+
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEE
Confidence 446778888 55555566679999999999999998863 4667899998865 56566558999999999876433332
Q ss_pred eeecccC-CceeeeEEEEeecCCEEEEee--CCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEe-cC-----
Q 009274 332 KKWNEEK-DWRYSGIHALTTSGRYLYTGS--GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGS-RD----- 401 (538)
Q Consensus 332 ~~~~~~~-~~~~~~~~~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s-~d----- 401 (538)
....... ..... -+++ +++.++++. .++.|.++|..+++.+..+.... ....++++ ++.++.++ .+
T Consensus 122 ~~g~~~~~~~~p~-~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 122 ECPDMDMESGSTE-QMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp ECTTCCTTTCBCC-CEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EcCCccccCCCcc-eEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCc
Confidence 2211000 00111 1233 455555555 48899999999999888776433 34678887 44444444 33
Q ss_pred -----CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc--cee-e-eccccceEEEEEe
Q 009274 402 -----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMK-S-MQTHKGSVFAVFL 472 (538)
Q Consensus 402 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~-~-~~~h~~~v~~~~~ 472 (538)
+.|.++|..+++....+......... .++++|+++.++++.. .|.+||... ... . +..+......+++
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~-~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPS-EVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTV 274 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCE-EEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEE
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCce-eEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEE
Confidence 78999999999887777543222233 3799999999988765 899999643 211 1 1211234555554
Q ss_pred ---CCCEEEEE----eCCCeEEEEecCCCeeEeee
Q 009274 473 ---EGKWLFTG----GWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 473 ---~~~~l~sg----s~dg~v~iwd~~~~~~~~~~ 500 (538)
++.++++. ..++.|.+||.. ++.....
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 45555665 578999999998 5544433
No 212
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.44 E-value=2.4e-11 Score=129.03 Aligned_cols=246 Identities=11% Similarity=0.044 Sum_probs=155.9
Q ss_pred eecCCCcEE---------EEEEc----CCE-EEEEeC-CCcEEEEeCC--CCceEEEEec-----CCcCeEEEEEecCCC
Q 009274 248 LQGHRDCVT---------GLAVG----GGF-LFSSSF-DKSIHVWSLK--DFSHVHTFKG-----HDHKVMAVVYVDEDQ 305 (538)
Q Consensus 248 l~~h~~~V~---------~l~~~----~~~-l~s~s~-dg~i~iwd~~--~~~~~~~~~~-----h~~~v~~l~~~~~~~ 305 (538)
+..|...+. ...|+ |++ |+.++. +..|.+|++. .......+.. |...+.+++|+|+++
T Consensus 63 l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~ 142 (662)
T 3azo_A 63 ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG 142 (662)
T ss_dssp SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT
T ss_pred eCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC
Confidence 445655555 55454 777 665543 5667777765 2033455555 677889999999776
Q ss_pred CEEEEEcCC----------CcEEEEEccCCCCC--cceeeec-ccCCceeeeEEEEeecCCEEEEeeCC--------CcE
Q 009274 306 PLCISGDSG----------GGIFVWSFSFPLGH--EPLKKWN-EEKDWRYSGIHALTTSGRYLYTGSGD--------RTI 364 (538)
Q Consensus 306 ~~l~s~~~d----------g~i~vwd~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sg~~d--------g~i 364 (538)
.+ ++++.+ ..|++||+.+.... ....... .+. ......+++|||++|+.++.+ ..|
T Consensus 143 ~l-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 143 EV-WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp EE-EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred EE-EEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 55 555544 58999998862100 0111111 111 122234799999999887755 379
Q ss_pred EEEECC-CC---ceeEEecCCCCCeEEEEEe--CCEEEEEecCC--cEEEEECCCCceeEEEecCCCCce-------EEE
Q 009274 365 KAWSLL-DG---TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG--TIRLWSLSDHSLLTVLEEDSSGAV-------SSV 429 (538)
Q Consensus 365 ~iwd~~-~~---~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~-------~~~ 429 (538)
++||+. ++ +......+|...+..++|+ ++++++++.++ .|.+||+.+++.......+ .... ...
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCS
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc-ccccCccccccCce
Confidence 999998 56 4444445567889999999 44777777888 6667777666654333221 1110 122
Q ss_pred EEEcCCCCEEEEEeCCCcEEEE--eCC-cceeeeccccceEEEE-EeCCCEE--EEEeCCC--eEEEEecCCCeeEe
Q 009274 430 LSLTAVQHTLVVSHESGSIKVW--RND-KFMKSMQTHKGSVFAV-FLEGKWL--FTGGWDK--TVSVQELAGDEFEE 498 (538)
Q Consensus 430 ~~~~~~~~~l~~~~~dg~i~iw--d~~-~~~~~~~~h~~~v~~~-~~~~~~l--~sgs~dg--~v~iwd~~~~~~~~ 498 (538)
+.++++++++++++. +.+++| |.. .....+..|...+..+ +++++.+ ++++.+. .|.+||+.+++...
T Consensus 299 ~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 299 FAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp EEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 578899999999998 999999 543 4567777888888888 8866543 3444454 46666776766543
No 213
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.44 E-value=1.9e-10 Score=110.87 Aligned_cols=203 Identities=8% Similarity=0.044 Sum_probs=143.2
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-eEEEE---------ecCCcCeEEEEEecCCCCEEEEEc-CCCc
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTF---------KGHDHKVMAVVYVDEDQPLCISGD-SGGG 316 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~~~~~---------~~h~~~v~~l~~~~~~~~~l~s~~-~dg~ 316 (538)
++-.....++++ |+++++...++.|++||.+... .+..+ ..+-.....++++|+++.++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 455678999998 7888888889999999986442 55555 234457899999986777878886 6999
Q ss_pred EEEEEccCCCCCcceeeeccc-----CCceeeeEEEEeec-CCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEE
Q 009274 317 IFVWSFSFPLGHEPLKKWNEE-----KDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTL 388 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l 388 (538)
|++||.. +.....+...... ........++++++ ++++++...++.|++||..+++.+..+. .+...+.++
T Consensus 168 I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 9999943 2221111111000 01111234578888 6677777788999999998899888873 456678888
Q ss_pred EEeCCEEEEEe--------cCCcEEEEECCCCceeEEEec--CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 009274 389 AVCNGVLYSGS--------RDGTIRLWSLSDHSLLTVLEE--DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (538)
Q Consensus 389 ~~~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 454 (538)
+++++.++... .+..|++||..+++.+..+.. .+..... .++++++|.++++...++.|++|+..
T Consensus 247 ~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~-~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 247 SYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPH-DIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEE-EEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCee-EEEECCCCCEEEEECCCCEEEEEeCC
Confidence 88865444432 345899999999998888742 2222333 37899999888888889999999854
No 214
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.44 E-value=4.2e-14 Score=139.66 Aligned_cols=123 Identities=17% Similarity=0.306 Sum_probs=73.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+............+||+.|||||++....... ........+++++|||||||+||+|++|+
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~----~~~~~~~~~~~~~DiwSlGvil~ell~G~~ 265 (390)
T 2zmd_A 190 DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR----ENGKSKSKISPKSDVWSLGCILYYMTYGKT 265 (390)
T ss_dssp SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----------------CCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc----cccccccCCCChhhHHHHHHHHHHHHHCCC
Confidence 4678999 7777776554443455789999999999992211100 00111246889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh----c-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF----G-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||......... ...+..... + .....+.+++.+||..+|.+||++.++.+
T Consensus 266 Pf~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 266 PFQQIINQISK-----------------------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp TTTTCCCHHHH-----------------------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhHHHHH-----------------------HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 99763221000 000000000 0 11123778999999999999999888765
No 215
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.44 E-value=1.7e-14 Score=138.57 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=78.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+.+... .+...|||.|||||++ .+ ..+++++|||||||+||+|++|.
T Consensus 140 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~ 201 (321)
T 1tki_A 140 SSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVH------QH---------DVVSTATDMWSLGTLVYVLLSGIN 201 (321)
T ss_dssp CCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHH------TT---------CEECHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCCeECCCCCc---cccccCChhhcCcHHh------cC---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 4567888 66776654432 4568999999999999 44 45788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+.... ............ ......+.+++.+||..+|.+||++.++.+
T Consensus 202 pf~~~~~~~~~~~i---------~~~~~~~~~~~~--------~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 202 PFLAETNQQIIENI---------MNAEYTFDEEAF--------KEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TTCCSSHHHHHHHH---------HHTCCCCCHHHH--------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcCCCHHHHHHHH---------HcCCCCCChhhh--------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 99876444211000 000000000101 112234788999999999999999988766
No 216
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.44 E-value=1.2e-14 Score=141.97 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=76.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++...+... ....+||+.|||||++ .+ ..+++++|||||||+||+|++|. |
T Consensus 168 ~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~P 229 (362)
T 2bdw_A 168 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVL------KK---------DPYSKPVDIWACGVILYILLVGYPP 229 (362)
T ss_dssp CCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeecCcceEecCCcc---cccCCCCccccCHHHH------cc---------CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 357888 66776664432 4568999999999999 43 56789999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+... . ...+.. ........+.+++.+||..+|.+||++.++.+
T Consensus 230 f~~~~~~~~~~~i~~~-~-----~~~~~~------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 230 FWDEDQHRLYAQIKAG-A-----YDYPSP------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp SCCSSHHHHHHHHHHT-C-----CCCCTT------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCCHHHHHHHHHhC-C-----CCCCcc------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 9875443211 00000 0 000000 01111234778999999999999999877654
No 217
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=4.6e-11 Score=115.04 Aligned_cols=251 Identities=9% Similarity=-0.009 Sum_probs=165.7
Q ss_pred CCCcEEEEeCCCCceEEEEe------cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceee
Q 009274 270 FDKSIHVWSLKDFSHVHTFK------GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYS 343 (538)
Q Consensus 270 ~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 343 (538)
.+++|.+||.++++....+. ........+.+. ++.++++...++.|.+||..+.+....+.. .. ..
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~---~~---~p 86 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITG---FT---SP 86 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEEC---CS---SE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCC---CC---CC
Confidence 38899999999988765431 122345777774 566777778889999999987765444421 11 11
Q ss_pred eEEEEeecCCEEEEee-CCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEEe--cCCcEEEEECCCCcee
Q 009274 344 GIHALTTSGRYLYTGS-GDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSGS--RDGTIRLWSLSDHSLL 415 (538)
Q Consensus 344 ~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~s--~dg~i~iwd~~~~~~~ 415 (538)
...+++++++ ++++. .++.|.+||..+++....+.... .....+++.++.++++. .++.|.++|+.+++..
T Consensus 87 ~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 87 RYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred cEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 2346777874 55554 78999999999998887765433 14556777877766666 4899999999999988
Q ss_pred EEEecCCCCceEEEEEEcCCCCEEEEEeCC----------CcEEEEeCCc--ceeeeccc-cceEEEEEe--CCCEEEEE
Q 009274 416 TVLEEDSSGAVSSVLSLTAVQHTLVVSHES----------GSIKVWRNDK--FMKSMQTH-KGSVFAVFL--EGKWLFTG 480 (538)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~--~~~~~~~h-~~~v~~~~~--~~~~l~sg 480 (538)
..+..... . ..+.++++|++++++..+ +.|.++|..+ ....+... ......+++ +++.|+++
T Consensus 166 ~~i~~g~~--p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 166 DELTIGIQ--P-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EEEECSSC--B-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred EEEEcCCC--c-cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence 87765322 1 226889999877776654 7899999653 34344322 123455555 68888887
Q ss_pred eCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-e-CCEEEEE-----ECCCeEEEEEcC
Q 009274 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-W-QGKLFVG-----CADRTVKVYYYG 537 (538)
Q Consensus 481 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sg-----~~dg~v~vw~~~ 537 (538)
.. .|.+||..+++......... .......+.. + ++.++++ ..++.|.+|+..
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~---~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEF---RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCC---CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred cc--EEEEEECCCCceeeeeeecC---CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 65 89999998877531111000 1223344444 3 5666665 468899999853
No 218
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.43 E-value=2.6e-14 Score=138.88 Aligned_cols=124 Identities=18% Similarity=0.314 Sum_probs=71.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+............+||+.|||||++...... .+.......+++++|||||||+||+|++|+
T Consensus 143 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----~~~~~~~~~~~~~~DiwslG~il~ell~g~~ 218 (343)
T 3dbq_A 143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS----RENGKSKSKISPKSDVWSLGCILYYMTYGKT 218 (343)
T ss_dssp TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhcccc----ccccccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 5668998 677777665544445578999999999999432111 001112356788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh----hc-CccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK----FG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||......... ........ .+ .....+.+++.+||..+|.+||++.++.+.
T Consensus 219 pf~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 219 PFQQIINQISK-----------------------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TTTTCCSHHHH-----------------------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHHHH-----------------------HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 99753221000 00000000 01 111247889999999999999998887653
No 219
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.43 E-value=1.7e-11 Score=121.24 Aligned_cols=276 Identities=6% Similarity=-0.011 Sum_probs=160.6
Q ss_pred EEEEEEc--CCEEEEEeCC---CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 255 VTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 255 V~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
+.+++|+ |++|+.+..+ ..|.+||+.+++.......+......+.|+|++. .++.++.++.|++||+.++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER-AFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS-EEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC-EEEEEEcCCcEEEEECCCCCcEE
Confidence 6677888 8887776543 4688889988876544333333333478999665 55667777899999988654321
Q ss_pred ceeeecccCCceee-e-E---------------EEEeecCCEEEEe-----eCCCcEEEEECCCCceeEEecCCCCCeEE
Q 009274 330 PLKKWNEEKDWRYS-G-I---------------HALTTSGRYLYTG-----SGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (538)
Q Consensus 330 ~~~~~~~~~~~~~~-~-~---------------~~~~~~~~~l~sg-----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (538)
... .+..+... . + ..++|+++.++.+ ..+..|++||+.+++..... .+...+..
T Consensus 117 ~~~---~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~ 192 (396)
T 3c5m_A 117 IYT---VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGH 192 (396)
T ss_dssp EEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEE
T ss_pred EEe---cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCccccc
Confidence 111 11111100 0 0 1345666655443 35678999999988765544 46677899
Q ss_pred EEEeC--C-EEEEEecC------CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC-----CcEEEEeC
Q 009274 388 LAVCN--G-VLYSGSRD------GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES-----GSIKVWRN 453 (538)
Q Consensus 388 l~~~~--~-~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~ 453 (538)
+.|++ + .++..+.+ ..|.+||+.+++.. .+..+........+.|+|+|+.|+.++.+ +.|++||.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEEC
Confidence 99985 3 46555543 46889998765533 23222222233446999999987776543 44999996
Q ss_pred Ccc-eeeeccccceEEEEEe-CCCEEEEEe----------------CCCeEEEEecCCCeeEeeeecCCcc-----cCC-
Q 009274 454 DKF-MKSMQTHKGSVFAVFL-EGKWLFTGG----------------WDKTVSVQELAGDEFEEDVIPTGAI-----PCG- 509 (538)
Q Consensus 454 ~~~-~~~~~~h~~~v~~~~~-~~~~l~sgs----------------~dg~v~iwd~~~~~~~~~~~~~~~~-----~~~- 509 (538)
... ...+.........+++ +|+++++++ .++.|++||+.+++......+.... ...
T Consensus 272 ~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 272 ETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQI 351 (396)
T ss_dssp TTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSST
T ss_pred CCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccC
Confidence 432 2222211111145567 899888765 3478999999887654333322110 000
Q ss_pred CceEEEEEeCCE-EEEEE-CCCeEEEEEc
Q 009274 510 SVITALLYWQGK-LFVGC-ADRTVKVYYY 536 (538)
Q Consensus 510 ~~~~~~~~~~~~-l~sg~-~dg~v~vw~~ 536 (538)
......+.+++. |+.++ .++...+|.+
T Consensus 352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 011223455664 55544 4666666654
No 220
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=7.6e-11 Score=126.15 Aligned_cols=242 Identities=11% Similarity=0.079 Sum_probs=157.3
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCC-----cEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCc------
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDK-----SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG------ 316 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~------ 316 (538)
+|...+.+++|+ |++|+.++.++ .|++||+.+++.......+ ..+..++|+|++..++ .++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~-~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMF-YNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEE-EEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEE-EEEECCccccccc
Confidence 355568889999 88888776543 8999999999877643222 2367899999776554 4444444
Q ss_pred ----------EEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC-----CCcEEEEECCC------Cc-e
Q 009274 317 ----------IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-----DRTIKAWSLLD------GT-L 374 (538)
Q Consensus 317 ----------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----dg~i~iwd~~~------~~-~ 374 (538)
|++|++.++.....+. ..............+++||++|+.++. +..|++||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILC-AEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEE-eccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 9999998764322221 111111111224578999998887765 57899999976 43 3
Q ss_pred eEEecCCCCCeEEEEEe--CCEEEEEecC----CcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEeCCC
Q 009274 375 SCTMSGHKSAVSTLAVC--NGVLYSGSRD----GTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (538)
Q Consensus 375 ~~~~~~h~~~v~~l~~~--~~~l~s~s~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 446 (538)
...+..+...+... |+ ++.|+..+.+ +.|.+||+.++.. ...+..+........+.+++++.++++...|+
T Consensus 279 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 55666666665553 44 6666555543 3699999988752 34444443322333357777778888888888
Q ss_pred c--EEEEeC--CcceeeeccccceEEEEEe--CCCEEE-EEe---CCCeEEEEecCCCe
Q 009274 447 S--IKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLF-TGG---WDKTVSVQELAGDE 495 (538)
Q Consensus 447 ~--i~iwd~--~~~~~~~~~h~~~v~~~~~--~~~~l~-sgs---~dg~v~iwd~~~~~ 495 (538)
. |.+||. ++....+..+.+.+..+++ +++.++ +.+ ..++|+.||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 455675 3456777777778887776 666555 323 34789999998766
No 221
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.43 E-value=5.8e-14 Score=137.67 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=83.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ellt~g~ 303 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGVLMWEIFTLGG 303 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH------HT---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHh------cC---------CCCCcHHHHHHHHHHHHHHHcCCC
Confidence 3567898 677766654433234457889999999999 43 567899999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+... +........ ......+.+++.+||..+|.+||++.++.+.+.++
T Consensus 304 ~p~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 304 SPYPGIPVEELFKL---------------------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp CSSTTCCGGGHHHH---------------------HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHH---------------------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9987544311100 000000000 11122478899999999999999999999988876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 363 l 363 (370)
T 2psq_A 363 L 363 (370)
T ss_dssp H
T ss_pred H
Confidence 5
No 222
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.43 E-value=5.1e-14 Score=135.49 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=75.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ....+||+.|||||++ .| ....++++|||||||+||+|++|+ |
T Consensus 151 ~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~p 213 (328)
T 3fe3_A 151 MNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELF------QG--------KKYDGPEVDVWSLGVILYTLVSGSLP 213 (328)
T ss_dssp SCEEECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHH------HT--------CCCCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeeccCceecCCCCc---cccccCCcceeCcccc------cC--------CCcCCchhhhhhhHHHHHHHHhCCCC
Confidence 457888 66766654432 5678999999999999 43 122347899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.....+.. .+... ....+ .....+.+++.+||..+|.+||++.++.+
T Consensus 214 f~~~~~~~~~~---------------------~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 214 FDGQNLKELRE---------------------RVLRG-KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp SCCSSHHHHHH---------------------HHHHC-CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCCHHHHHH---------------------HHHhC-CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 98765442110 00000 00000 11223778999999999999999888765
No 223
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.42 E-value=1.3e-14 Score=139.58 Aligned_cols=129 Identities=12% Similarity=0.150 Sum_probs=81.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+++...............||+.|||||++ .+ ..+++++|||||||+||+|+||+ |
T Consensus 176 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~g~~p 240 (321)
T 2qkw_B 176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF------IK---------GRLTEKSDVYSFGVVLFEVLCARSA 240 (321)
T ss_dssp CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHH------HH---------CBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred CCEEEeecccccccccccccccccccCCCccccCHHHh------cC---------CCCCcccchHhHHHHHHHHHhCCCc
Confidence 467888 555554433333234467899999999998 22 56789999999999999999999 9
Q ss_pred cchhhhhheeeccc----cccCcchh-hc--chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVST----KASDDNIA-CL--GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~----~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|....+........ ......+. .. ....... +..+. .+.+++.+||+.+|.+||++.++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR---PESLR--------KFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp CSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSC---HHHHH--------HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccCcHHHHHHHHHhhhccccccHHHhcChhhccccC---HHHHH--------HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 98754432110000 00000000 00 0000000 11111 27789999999999999999999988
Q ss_pred HHHhh
Q 009274 162 IRELI 166 (538)
Q Consensus 162 l~~l~ 166 (538)
+..++
T Consensus 310 L~~~l 314 (321)
T 2qkw_B 310 LEYAL 314 (321)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88765
No 224
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.42 E-value=9.8e-14 Score=131.81 Aligned_cols=114 Identities=16% Similarity=0.243 Sum_probs=76.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+...... ....+||+.|||||++ .+ ..+++++|||||||+||+|+||+
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 214 (297)
T 3fxz_A 152 DGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVV------TR---------KAYGPKVDIWSLGIMAIEMIEGEP 214 (297)
T ss_dssp TCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHH------HC---------SCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEeeCCCceecCCcccc--cCCccCCcCccChhhh------cC---------CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 3457888 556666544322 4568999999999999 43 56789999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||......... .+...... ... ........+.+++.+||..+|.+||++.++.+
T Consensus 215 pf~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 215 PYLNENPLRALYLIATNGTP----ELQ---------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp TTTTSCHHHHHHHHHHHCSC----CCS---------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCCHHHHHHHHHhCCCC----CCC---------------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 99775433111 00000000 000 00011123778999999999999999887754
No 225
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.42 E-value=8.6e-14 Score=136.91 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=71.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ...+++||+.|||||++ .+ ..++.++|+|||||+||||++|+ |
T Consensus 190 g~ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l------~~---------~~~~~~~DiwslGvllyell~G~~P 252 (396)
T 4dc2_A 190 GHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSP 252 (396)
T ss_dssp SCEEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeecceeeecccCCC--ccccccCCcccCCchhh------cC---------CCCChHHHHHHHHHHHHHHHhCCCC
Confidence 457888 66665332222 15579999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|......... ...........+... ....+ .....+.+++.+||..+|.+|+++
T Consensus 253 f~~~~~~~~~------------~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 253 FDIVGSSDNP------------DQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp STTTTC------------------CCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred Cccccccccc------------chhhHHHHHHHHhcc-ccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 9753221000 000000000101000 00111 112347889999999999999986
No 226
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.41 E-value=5.5e-14 Score=136.13 Aligned_cols=113 Identities=20% Similarity=0.238 Sum_probs=67.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...... .....+.+||+.|||||++ .| ...++.++|||||||+||+|++|. |
T Consensus 145 ~~~kL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~P 209 (347)
T 3zgw_A 145 HKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPELI------QG--------KSYLGSEADVWSMGILLYVLMCGFLP 209 (347)
T ss_dssp SCEEECCCTTCBC---------------CGGGCCHHHH------TT--------C---CCHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeccCcccccCCC-CccccccCCccCccCHHHH------cC--------CCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 457888 5666655432 2235678999999999999 44 122478999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.....+. ..+..............+.+++.+||..+|.+||++.++.+
T Consensus 210 f~~~~~~~~~---------------------~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 210 FDDDNVMALY---------------------KKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp SCCSSHHHHH---------------------HHHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 9876444111 00000000000011223678999999999999999988765
No 227
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.41 E-value=5.4e-14 Score=135.72 Aligned_cols=104 Identities=17% Similarity=0.250 Sum_probs=70.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ...+++||+.|||||++ .+ ..++.++|+|||||+||||++|+ |
T Consensus 142 g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~P 204 (337)
T 1o6l_A 142 GHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRLP 204 (337)
T ss_dssp SCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGG------SS---------SCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeeccchhhcccCCC--cccccccChhhCChhhh------cC---------CCCCchhhcccchhHHHHHhcCCCC
Confidence 457888 56665433322 25578999999999998 43 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.......+... +... ....+ .....+.+++.+||..+|.+||.
T Consensus 205 f~~~~~~~~~~~---------------------i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 205 FYNQDHERLFEL---------------------ILME-EIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp SCCSSHHHHHHH---------------------HHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred CCCCCHHHHHHH---------------------HHcC-CCCCCCCCCHHHHHHHHHHhhcCHHHhcC
Confidence 987544421100 0000 00000 11224778999999999999993
No 228
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.41 E-value=2e-13 Score=131.14 Aligned_cols=133 Identities=11% Similarity=0.125 Sum_probs=80.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++....... .....||+.|||||++...... ......++.++|||||||+||+|+||+
T Consensus 152 ~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~-------~~~~~~~~~~~DiwslG~il~el~~g~~ 221 (319)
T 4euu_A 152 QSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLR-------KDHQKKYGATVDLWSIGVTFYHAATGSL 221 (319)
T ss_dssp CEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSC-------CCCCCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhcccc-------ccccCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4568888 66776655432 4468899999999998433211 011356789999999999999999999
Q ss_pred ccchhhhh-----heeeccccccC----------cchhhcc-h-h--hHHHHHHHHHHHhhhcCccchHHHHHhhhhccC
Q 009274 88 QFTKELID-----YIRCVSTKASD----------DNIACLG-M-Y--MAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFD 148 (538)
Q Consensus 88 pf~~~~~~-----~~~~~~~~~~~----------~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 148 (538)
||...... .+..+...... .....+. . + .......+. .+.+++.+||..+
T Consensus 222 pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~ll~~~L~~d 290 (319)
T 4euu_A 222 PFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV-----------LLTPVLANILEAD 290 (319)
T ss_dssp SEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH-----------HHHHHHHHHSCCC
T ss_pred CCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHH-----------HhHHHHHHhccCC
Confidence 99743211 00000000000 0000000 0 0 000011111 2677999999999
Q ss_pred CCCCcchhhHHHHHHH
Q 009274 149 PGCRPLLTNVWKCIRE 164 (538)
Q Consensus 149 p~~r~~~~~~~~~l~~ 164 (538)
|.+||++.++.+....
T Consensus 291 P~~R~s~~ell~h~~d 306 (319)
T 4euu_A 291 QEKCWGFDQFFAETSD 306 (319)
T ss_dssp TTTSCCHHHHHHHHHH
T ss_pred hhhhccHHHhhhccHH
Confidence 9999999998887554
No 229
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.41 E-value=4.9e-14 Score=137.27 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=75.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ ||
T Consensus 171 ~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~pf 233 (351)
T 3c0i_A 171 PVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVV------KR---------EPYGKPVDVWGCGVILFILLSGCLPF 233 (351)
T ss_dssp CEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEecCcceeEecCCCe--eecCCcCCcCccCHHHH------cC---------CCCCchHhhHHHHHHHHHHHHCCCCC
Confidence 46888 56666654322 24568999999999999 44 56789999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+........+.. .. ....+. ........+.+++.+||..+|.+||++.++.+
T Consensus 234 ~~~~~~~~~~i~~-~~-----~~~~~~------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 234 YGTKERLFEGIIK-GK-----YKMNPR------------QWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CSSHHHHHHHHHH-TC-----CCCCHH------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcHHHHHHHHHc-CC-----CCCCcc------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8754331110000 00 000000 00112234788999999999999999887664
No 230
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.41 E-value=8.3e-14 Score=136.25 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=74.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ...+++||+.|||||++ .+ ..++.++|+|||||++|||++|+ |
T Consensus 176 g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~G~~P 238 (373)
T 2r5t_A 176 GHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVL------HK---------QPYDRTVDWWCLGAVLYEMLYGLPP 238 (373)
T ss_dssp SCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeeCccccccccCCC--ccccccCCccccCHHHh------CC---------CCCCchhhhHHHHHHHHHHHcCCCC
Confidence 457888 66665333222 25579999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
|.+.+...+. ..+..............+.+++.+||..+|.+||.+.+..
T Consensus 239 f~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 239 FYSRNTAEMY---------------------DNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp TCCSBHHHHH---------------------HHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCCCCHHHHH---------------------HHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 9876444211 0000000000011122477899999999999999976433
No 231
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.41 E-value=3.9e-14 Score=137.64 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=66.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+|+....... ...+++||+.|||||++. + ..+++++|||||||++|||++|+ |
T Consensus 161 g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~------~---------~~~~~~~DiwslG~il~ell~G~~P 223 (353)
T 3txo_A 161 GHCKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQ------E---------MLYGPAVDWWAMGVLLYEMLCGHAP 223 (353)
T ss_dssp SCEEECCCTTCBCSCC-----------CCGGGCCHHHHH------H---------HHCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEccccceeecccCCc--cccccCCCcCeEChhhcC------C---------CCcCCccCCCcchHHHHHHHhCCCC
Confidence 457888 56665433322 255789999999999992 2 44678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|.+.+...+........ ...+ ......+.+++.+||.++|.+||++
T Consensus 224 f~~~~~~~~~~~i~~~~------~~~p---------------~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 224 FEAENEDDLFEAILNDE------VVYP---------------TWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp SCCSSHHHHHHHHHHCC------CCCC---------------TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCCCHHHHHHHHHcCC------CCCC---------------CCCCHHHHHHHHHHhhhCHHHccCC
Confidence 98765542220000000 0000 0111237789999999999999997
No 232
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.41 E-value=7.6e-14 Score=134.49 Aligned_cols=121 Identities=13% Similarity=0.161 Sum_probs=82.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+-.|+. |+++.+.........+...||+.|||||++ .+ ..+++++|||||||++|+|+| |+
T Consensus 152 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~~g~~ 216 (325)
T 3kex_A 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI------HF---------GKYTHQSDVWSYGVTVWELMTFGAE 216 (325)
T ss_dssp SCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CeEEECCCCcccccCcccccccccCCCCcccccChHHh------cc---------CCCChhhHhHHhHHHHHHHHhCCCC
Confidence 457888 677777665544445678899999999999 32 567899999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHH-hhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+... +..... .........+.+++.+||..+|.+||++.++.+.+.++.
T Consensus 217 p~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 217 PYAGLRLAEVPDL---------------------LEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp TTTTSCTTHHHHH---------------------HHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CccccCHHHHHHH---------------------HHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9987543311100 000000 000112234788999999999999999999999988876
Q ss_pred cC
Q 009274 167 IK 168 (538)
Q Consensus 167 ~~ 168 (538)
..
T Consensus 276 ~~ 277 (325)
T 3kex_A 276 RD 277 (325)
T ss_dssp TS
T ss_pred hc
Confidence 43
No 233
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.40 E-value=2.9e-14 Score=135.05 Aligned_cols=127 Identities=17% Similarity=0.230 Sum_probs=71.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...............||+.|||||++ .+ .....++.++||||||+++|+|++|+ |
T Consensus 157 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p 224 (289)
T 3og7_A 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI------RM------QDSNPYSFQSDVYAFGIVLYELMTGQLP 224 (289)
T ss_dssp TEEEECCCC------------------CCCTTCCHHHH------C----------CCSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEccceeccccccccccccccccCCCccccCchhh------cc------cCCCCCCcccchHHHHHHHHHHHHCCCC
Confidence 457888 556555443333335568899999999998 21 01245678999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
|...... .+..... ....... +..........+.+++.+||..+|.+||++.++.+.+.++.
T Consensus 225 ~~~~~~~~~~~~~~~--------~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 225 YSNINNRDQIIEMVG--------RGSLSPD--------LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TSSCCCHHHHHHHHH--------HTSCCCC--------TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccccchHHHHHHHhc--------ccccCcc--------hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 9764222 1000000 0000000 00000111234788999999999999999999998887764
No 234
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.40 E-value=3.6e-14 Score=139.03 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=82.5
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
.+|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||||+| |. |
T Consensus 222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ellt~g~~p 286 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF------ME---------GIFTSKTDTWSFGVLLWEIFSLGYMP 286 (367)
T ss_dssp CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred eEEECCCccccccccccccccCCCcCCcccEECHHHh------cC---------CCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 58888 666655443322224457899999999998 22 567899999999999999998 88 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
|.......+. .+.. .. ... ........+.+++.+||+.+|.+||++.++.+.+..+..
T Consensus 287 f~~~~~~~~~~~i~~-~~-----~~~---------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 287 YPSKSNQEVLEFVTS-GG-----RMD---------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp STTCCHHHHHHHHHT-TC-----CCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHc-CC-----CCC---------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 9875444211 0000 00 000 000112237789999999999999999999988877764
Q ss_pred CC
Q 009274 168 KP 169 (538)
Q Consensus 168 ~~ 169 (538)
.+
T Consensus 346 ~~ 347 (367)
T 3l9p_A 346 DP 347 (367)
T ss_dssp CH
T ss_pred Ch
Confidence 43
No 235
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.40 E-value=1.2e-13 Score=135.26 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=81.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||+|+| |+
T Consensus 229 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~ 293 (359)
T 3vhe_A 229 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI------FD---------RVYTIQSDVWSFGVLLWEIFSLGA 293 (359)
T ss_dssp GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcEEEEeccceeeecccccchhccccCCCceeEChhhh------cC---------CCCCchhhhhhHHHHHHHHHhcCC
Confidence 3567888 666666544333335568999999999999 22 557799999999999999999 99
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... ............ ......+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 294 ~p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 294 SPYPGVKIDEEF--------------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CSSTTCCCSHHH--------------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccchhHHH--------------------HHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 99875322000 000000000000 11223478899999999999999999999988877
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 354 ~ 354 (359)
T 3vhe_A 354 L 354 (359)
T ss_dssp H
T ss_pred H
Confidence 5
No 236
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.40 E-value=1.9e-13 Score=133.24 Aligned_cols=124 Identities=15% Similarity=0.077 Sum_probs=82.8
Q ss_pred eeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 13 VAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
.+|+. |+++.+....... ..+...||+.|||||++ .+ ..+++++|||||||+||+|++
T Consensus 199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH------KG---------CGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCcceeeccCCCccccccccccccccCCccccCHHHH------cc---------CCCCchhhHHHHHHHHHHHHh
Confidence 67888 5666665443211 12456999999999999 44 567899999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh------cCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF------GSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|+ ||......... ... ........+.... ......+.+++.+||..+|.+||++.++
T Consensus 264 g~~pf~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 264 GFLPWTNCLPNTED------------IMK----QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp SCCTTGGGTTCHHH------------HHH----HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred CCCCcccCCcCHHH------------HHH----HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 99 99875322000 000 0000000000000 0113458889999999999999999999
Q ss_pred HHHHHHhhc
Q 009274 159 WKCIRELII 167 (538)
Q Consensus 159 ~~~l~~l~~ 167 (538)
.+.+.++..
T Consensus 328 ~~~L~~~~~ 336 (352)
T 2jii_A 328 RNNLEALLQ 336 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998888763
No 237
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.40 E-value=1.1e-13 Score=134.48 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=71.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ...+++||+.|||||++ .+ ..++.++|+|||||++|||++|+ |
T Consensus 158 g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~G~~P 220 (353)
T 2i0e_A 158 GHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEII------AY---------QPYGKSVDWWAFGVLLYEMLAGQAP 220 (353)
T ss_dssp SCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHH------TT---------CCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEEeCCcccccccCCc--ccccccCCccccChhhh------cC---------CCcCCcccccchHHHHHHHHcCCCC
Confidence 467888 56665332222 25578999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|.+.....+........ ...+ ......+.+++.+||..+|.+||..
T Consensus 221 f~~~~~~~~~~~i~~~~------~~~p---------------~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 221 FEGEDEDELFQSIMEHN------VAYP---------------KSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp SCCSSHHHHHHHHHHCC------CCCC---------------TTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CCCCCHHHHHHHHHhCC------CCCC---------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 98765442210000000 0000 0112247789999999999999974
No 238
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.40 E-value=4.1e-10 Score=108.56 Aligned_cols=235 Identities=12% Similarity=0.087 Sum_probs=151.1
Q ss_pred EEEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC----CcE
Q 009274 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG----GGI 317 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i 317 (538)
.+..+.++...+.+++|+ +++++++..++.|.+||.++++.......+...+.++++++++ .++++...+ +.|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceE
Confidence 345567777888999998 7777788889999999999887766554567889999998865 566666655 689
Q ss_pred EEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 009274 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (538)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (538)
.+||..+......+... ... .......++++++.+++... .+.|..+|..+++..... .+...+..++|+
T Consensus 115 ~~~d~~~~~~~~~~~~~--~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~ 190 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDL--STA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALS 190 (333)
T ss_dssp EEECTTSCSCEEEECSS--SSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEEC
T ss_pred EEEeCCCCEEEEEEccC--ccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEEC
Confidence 99998765432111100 111 12223467788887766553 356777776655543322 233457889998
Q ss_pred -C-CEEE-EEecCCcEEEEECCC-CceeEEE-----ecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-cceeeec
Q 009274 392 -N-GVLY-SGSRDGTIRLWSLSD-HSLLTVL-----EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQ 461 (538)
Q Consensus 392 -~-~~l~-s~s~dg~i~iwd~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~ 461 (538)
+ +.++ +.+.++.|.+||+.+ +.....+ ...........++++++|+++++...++.|.+||.. +....+.
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE
Confidence 3 4454 445688999999964 3333221 111111233447899999988888888999999964 3344444
Q ss_pred cccc------eEEEEEe--CCCEEEEEeCC
Q 009274 462 THKG------SVFAVFL--EGKWLFTGGWD 483 (538)
Q Consensus 462 ~h~~------~v~~~~~--~~~~l~sgs~d 483 (538)
.+.. .+.++++ +++.|+.++.+
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 3322 4566665 66677665555
No 239
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.40 E-value=2.7e-13 Score=129.58 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=76.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .+..+||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 157 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~l~~g~~p 218 (308)
T 3g33_A 157 GTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVL------LQ---------STYATPVDMWSVGCIFAEMFRRKPL 218 (308)
T ss_dssp SCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHH------HT---------SCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred CCEEEeeCccccccCCCcc---cCCccccccccCchHH------cC---------CCCCchHHHHHHHHHHHHHHhCCCC
Confidence 457888 56666554332 4578999999999999 33 56789999999999999999999 9
Q ss_pred cchhhhhhee-ec-c---ccccCc-----chhh----cchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIR-CV-S---TKASDD-----NIAC----LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~-~~-~---~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.+....... .+ + ...... .+.. ......... ..+.....+.+++.+||..+|.+||+
T Consensus 219 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~t 290 (308)
T 3g33_A 219 FCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS--------VVPEMEESGAQLLLEMLTFNPHKRIS 290 (308)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHH--------HSCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHH--------hCccccHHHHHHHHHHhcCCCccCCC
Confidence 9775433111 00 0 000000 0000 000000000 01112234788999999999999999
Q ss_pred hhhHHH
Q 009274 155 LTNVWK 160 (538)
Q Consensus 155 ~~~~~~ 160 (538)
+.++.+
T Consensus 291 ~~e~l~ 296 (308)
T 3g33_A 291 AFRALQ 296 (308)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 887654
No 240
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.40 E-value=6.7e-14 Score=134.97 Aligned_cols=122 Identities=12% Similarity=0.135 Sum_probs=81.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+|+.+.............||+.|||||++ .+ ..+++++|||||||+||+|+| |+
T Consensus 154 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~ 218 (327)
T 3poz_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI------LH---------RIYTHQSDVWSYGVTVWELMTFGSK 218 (327)
T ss_dssp TEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEccCcceeEccCCcccccccCCCccccccChHHh------cc---------CCCCchhhhhhhHHHHHHHHhcCCC
Confidence 457888 667776655444334567889999999999 32 567899999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.+.....+........ . ..........+.+++.+||..+|.+||++.++.+.+..+..
T Consensus 219 p~~~~~~~~~~~~~~~~~-------~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 219 PYDGIPASEISSILEKGE-------R-------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTTTCCGGGHHHHHHTTC-------C-------------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CccCCCHHHHHHHHHcCC-------C-------------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 998754432110000000 0 00001122247789999999999999999999988888764
Q ss_pred C
Q 009274 168 K 168 (538)
Q Consensus 168 ~ 168 (538)
.
T Consensus 279 ~ 279 (327)
T 3poz_A 279 D 279 (327)
T ss_dssp S
T ss_pred h
Confidence 4
No 241
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.39 E-value=8.5e-14 Score=134.73 Aligned_cols=108 Identities=14% Similarity=0.181 Sum_probs=74.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++........ ..+++||+.|||||++ .+ ..++.++|+|||||++|||++|+ |
T Consensus 155 g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~P 217 (345)
T 1xjd_A 155 GHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEIL------LG---------QKYNHSVDWWSFGVLLYEMLIGQSP 217 (345)
T ss_dssp SCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhh------cC---------CCCCChhhhHHHHHHHHHHhcCCCC
Confidence 457888 566654322221 4578999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchh-hHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLT-NVW 159 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~-~~~ 159 (538)
|.+.+...+. .+. ... ...+ .....+.+++.+||..+|.+||+.. ++.
T Consensus 218 f~~~~~~~~~~~i~---------~~~--------------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 218 FHGQDEEELFHSIR---------MDN--------------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp SCCSSHHHHHHHHH---------HCC--------------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCCCHHHHHHHHH---------hCC--------------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 9876544221 000 000 0000 1112377899999999999999986 543
No 242
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.39 E-value=3.3e-11 Score=128.61 Aligned_cols=242 Identities=9% Similarity=-0.026 Sum_probs=152.8
Q ss_pred cCCCcEEEEEEc--CCEEE-----EEeCCCcEEEEeCCCCceEEEEecCCcCe--EEEEEecCCCCEEEEEcCCCc----
Q 009274 250 GHRDCVTGLAVG--GGFLF-----SSSFDKSIHVWSLKDFSHVHTFKGHDHKV--MAVVYVDEDQPLCISGDSGGG---- 316 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~-----s~s~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~~l~s~~~dg~---- 316 (538)
+|...+.+++|+ |++|+ .|+.+.+|++||+.+++.+. ..+...+ ..++|+|++.. |+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~-l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKG-FYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSE-EEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCE-EEEEEecCCCCCc
Confidence 566678999999 88888 44556789999999988641 1122222 68899997664 455555554
Q ss_pred ---------EEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC----cEEEEECCCCceeEEecCCCC
Q 009274 317 ---------IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR----TIKAWSLLDGTLSCTMSGHKS 383 (538)
Q Consensus 317 ---------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~h~~ 383 (538)
|++|++.++.....+. ..............+++||++|+.++.++ .|++||..+++. ..+..+..
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~ 272 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVV-HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG 272 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEE-ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS
T ss_pred cccCCCCCEEEEEECCCCchhceEE-EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC
Confidence 9999998765322211 11111111222457899999888877666 788887665543 34444555
Q ss_pred CeEEEEEe-CCEEEEEec----CCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--C-
Q 009274 384 AVSTLAVC-NGVLYSGSR----DGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--N- 453 (538)
Q Consensus 384 ~v~~l~~~-~~~l~s~s~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~- 453 (538)
.+....+. ++ ++..+. ++.|.+||+.+++. ...+..+........++++ ++.++++...|+..++|. .
T Consensus 273 ~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 273 AKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 56666667 44 444443 58899999987753 2344333323333334666 677888888999888885 3
Q ss_pred Ccceeeeccc-cceEEEEEe--CCCEEEEE----eCCCeEEEEecCCCeeEe
Q 009274 454 DKFMKSMQTH-KGSVFAVFL--EGKWLFTG----GWDKTVSVQELAGDEFEE 498 (538)
Q Consensus 454 ~~~~~~~~~h-~~~v~~~~~--~~~~l~sg----s~dg~v~iwd~~~~~~~~ 498 (538)
++....+..+ .+.+..+++ +++.++.. ...++|++||+.+++...
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 3345555555 556666654 67666632 234789999998876543
No 243
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.39 E-value=1.3e-13 Score=131.74 Aligned_cols=115 Identities=20% Similarity=0.265 Sum_probs=72.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
++|+. |+++.+... .....||+.|||||++ .+ ..+++++|||||||++|+|+||+ ||
T Consensus 144 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~p~ 203 (307)
T 2eva_A 144 VLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF------EG---------SNYSEKCDVFSWGIILWEVITRRKPF 203 (307)
T ss_dssp EEEECCCCC-----------------CCTTSSCHHHH------TC---------CCCCTHHHHHHHHHHHHHHHHTCCTT
T ss_pred EEEEcccccccccccc-----cccCCCCCceEChhhh------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 47888 555555433 3356899999999999 44 56789999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHH-hhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
......... .. ........ .........+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 204 ~~~~~~~~~------------~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 204 DEIGGPAFR------------IM-------WAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp TTTCSSHHH------------HH-------HHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred hhhCccHHH------------HH-------HHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 753221000 00 00000000 000111224788999999999999999999999888765
No 244
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.39 E-value=7.2e-14 Score=135.29 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=73.5
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+..... ...+.+||+.|||||++.. ..+++++|||||||+||+|++|. ||
T Consensus 158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~---------------~~~~~~~DiwslG~il~ell~g~~Pf 220 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLER---------------QGYDAACDIWSLGVLLYTMLTGYTPF 220 (342)
T ss_dssp GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcC---------------CCCCCccCeeeHhHHHHHHhcCCCCC
Confidence 46888 66666654432 2456899999999999932 33568999999999999999999 99
Q ss_pred chhhh---hheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELI---DYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
..... ..+. ..........+..........+.+++.+||..+|.+||++.++.+
T Consensus 221 ~~~~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 221 ANGPDDTPEEIL-----------------ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CSSTTSCHHHHH-----------------HHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCcCCHHHHH-----------------HHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 75311 1110 000000000000000112234788999999999999999887665
No 245
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.39 E-value=2.3e-13 Score=137.37 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=84.8
Q ss_pred eeeeeec--cccccccccchhh-----hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSL 83 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~l 83 (538)
+...|+. |+++...+..... .....+||+.|||||++ .+ ..++.++|||||||+||+|
T Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~------~~---------~~~s~~sDvwSlGvil~el 206 (483)
T 3sv0_A 142 ANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTH------LG---------IEQSRRDDLESLGYVLMYF 206 (483)
T ss_dssp TTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHh------cC---------CCCChHHHHHHHHHHHHHH
Confidence 4567888 6677665543210 12268999999999999 44 5678899999999999999
Q ss_pred hhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHH-HHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 84 LIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEK-VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 84 ltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
++|+ ||.+..... ....+...... ...............+.+++.+||..+|.+||...++.+.
T Consensus 207 ltG~~Pf~~~~~~~--------------~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~ 272 (483)
T 3sv0_A 207 LRGSLPWQGLKAGT--------------KKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRL 272 (483)
T ss_dssp HHSSCTTSSCCCSS--------------HHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HhCCCCCccccchh--------------HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 9999 998743220 00001111110 1111111111223458899999999999999999999988
Q ss_pred HHHhhc
Q 009274 162 IRELII 167 (538)
Q Consensus 162 l~~l~~ 167 (538)
+..++.
T Consensus 273 L~~l~~ 278 (483)
T 3sv0_A 273 FRDLFI 278 (483)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 246
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.38 E-value=1.4e-13 Score=138.62 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=69.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+|+....... ..+..+||+.|||||++ .+ ..++.++|||||||+||+|++|+
T Consensus 285 ~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 347 (446)
T 4ejn_A 285 DGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVL------ED---------NDYGRAVDWWGLGVVMYEMMCGRL 347 (446)
T ss_dssp SSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHH------HT---------SCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEccCCCceeccCCCc--ccccccCCccccCHhhc------CC---------CCCCCccchhhhHHHHHHHhhCCC
Confidence 3568998 66665443322 25679999999999999 43 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~ 153 (538)
||.......+.... ...... ........+.+++.+||..+|.+||
T Consensus 348 Pf~~~~~~~~~~~i---------~~~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~ 392 (446)
T 4ejn_A 348 PFYNQDHEKLFELI---------LMEEIR------------FPRTLGPEAKSLLSGLLKKDPKQRL 392 (446)
T ss_dssp SSCCSSHHHHHHHH---------HHCCCC------------CCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred CCCCCCHHHHHHHH---------HhCCCC------------CCccCCHHHHHHHHHHcccCHHHhC
Confidence 99875444211000 000000 0001122477899999999999999
No 247
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.38 E-value=1.3e-13 Score=136.00 Aligned_cols=64 Identities=27% Similarity=0.553 Sum_probs=52.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+..... ....+||+.|||||++ .+ ..+++++|||||||+||+|+||+
T Consensus 197 ~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltg~~ 256 (382)
T 2vx3_A 197 RSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVL------LG---------MPYDLAIDMWSLGCILVEMHTGEP 256 (382)
T ss_dssp SCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeccCceecccc-----cccccCCccccChHHH------cC---------CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 3567898 666666543 3468999999999999 44 56889999999999999999999
Q ss_pred ccchhhh
Q 009274 88 QFTKELI 94 (538)
Q Consensus 88 pf~~~~~ 94 (538)
||.+...
T Consensus 257 pf~~~~~ 263 (382)
T 2vx3_A 257 LFSGANE 263 (382)
T ss_dssp SSCCSSH
T ss_pred CCCCCCH
Confidence 9987543
No 248
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.38 E-value=1.4e-13 Score=133.56 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=71.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+... ..+.+||+.|||||++ .+ ..++.++|+|||||+||+|++|+
T Consensus 177 ~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 236 (350)
T 1rdq_E 177 QGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEII------LS---------KGYNKAVDWWALGVLIYEMAAGYP 236 (350)
T ss_dssp TSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEcccccceeccCC-----cccccCCccccCHHHh------cC---------CCCCCcCCEecccHhHhHHhhCCC
Confidence 3457888 677776654 3368999999999999 44 56789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
||.......+.. .+... ....+ .....+.+++.+||..+|.+||+
T Consensus 237 Pf~~~~~~~~~~---------------------~i~~~-~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 237 PFFADQPIQIYE---------------------KIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp SSCCSSHHHHHH---------------------HHHHC-CCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred CCCCCCHHHHHH---------------------HHHcC-CCCCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 998764442110 00000 00000 11224788999999999999998
No 249
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.38 E-value=1e-13 Score=133.32 Aligned_cols=112 Identities=16% Similarity=0.218 Sum_probs=75.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+.+... .....||+.|||||++ .+ ..+++++|||||||+||+|++|+ ||
T Consensus 157 ~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~pf 218 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIV------NY---------EPLGLEADMWSIGVITYILLSGASPF 218 (321)
T ss_dssp CEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEccCccceecCcccc---ccccCCCCCccCcccc------cC---------CCCCCccccHHHHHHHHHHHHCCCCC
Confidence 57888 56666654322 4568899999999999 44 56789999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+.....+. .+... ...... . . .......+.+++.+||..+|.+||++.++.+
T Consensus 219 ~~~~~~~~~~~i~~~-------~~~~~~---~-~-------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 219 LGDTKQETLANITSV-------SYDFDE---E-F-------FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCSSHHHHHHHHHTT-------CCCCCH---H-H-------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CCCCHHHHHHHHHhc-------ccccCh---h-h-------hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 875443111 00000 000000 0 0 0112223778999999999999999887765
No 250
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.38 E-value=6.3e-10 Score=114.44 Aligned_cols=262 Identities=11% Similarity=0.031 Sum_probs=168.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc--CCCCCcceeeecccCCc
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS--FPLGHEPLKKWNEEKDW 340 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~ 340 (538)
..+++...+++|.++|..+++.+.++... ..+..+.|+|++. ++++++.|+.|.+||+. +.+.. .......
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v---~~i~~G~-- 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTTV---AEIKIGS-- 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCEE---EEEECCS--
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcEe---EEEecCC--
Confidence 45667778999999999999999988744 3567999999665 55667789999999985 44322 2222211
Q ss_pred eeeeEEEEe----ecCCEEEEeeC-CCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe---CCEEEEEecC
Q 009274 341 RYSGIHALT----TSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC---NGVLYSGSRD 401 (538)
Q Consensus 341 ~~~~~~~~~----~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~---~~~l~s~s~d 401 (538)
. ..-.+++ |+|+++++++. +++|.++|..+.+.+..+... ...+..+..+ +.++++...+
T Consensus 241 ~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 E-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp E-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred C-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 1 1245788 69997777665 599999999999988876421 1256777777 2266667778
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCc--ceeeecc-----ccc-eEEEEEe
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK--FMKSMQT-----HKG-SVFAVFL 472 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~~~~~-----h~~-~v~~~~~ 472 (538)
|.|.++|..+.+.+............ ...|+|++++++++. .++.|.++|+.+ ....+.. |.+ .+.-+.+
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~-d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLH-DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEE-EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred CeEEEEecCCCccceeeeeecccccc-CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 99999999876543333222222233 368999999987766 578999999654 3333322 432 2222355
Q ss_pred CCC-EEEEEe-CCCeEEEEecCC-------CeeEeeeecCCcccCCCceEEEEEeCCE-EEEEEC-------CCeEEEEE
Q 009274 473 EGK-WLFTGG-WDKTVSVQELAG-------DEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCA-------DRTVKVYY 535 (538)
Q Consensus 473 ~~~-~l~sgs-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~-------dg~v~vw~ 535 (538)
++. ..+++. .++.|.++|... .+........+ .........+++. +++... .+.|.++|
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g----~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG----GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC----CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 544 444443 468999999987 33333333221 1122233455654 555442 35899998
Q ss_pred cC
Q 009274 536 YG 537 (538)
Q Consensus 536 ~~ 537 (538)
+.
T Consensus 475 ~~ 476 (567)
T 1qks_A 475 IK 476 (567)
T ss_dssp GG
T ss_pred CC
Confidence 75
No 251
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.38 E-value=2e-13 Score=130.76 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=70.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++..... ..+.+||+.|||||++ .+ ..++.++|+|||||++|+|++|+ |
T Consensus 143 g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~p 202 (318)
T 1fot_A 143 GHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVV------ST---------KPYNKSIDWWSFGILIYEMLAGYTP 202 (318)
T ss_dssp SCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHH------TT---------CCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeecCcceecCCc-----cccccCCccccCHhHh------cC---------CCCCcccchhhhHHHHHHHHhCCCC
Confidence 467888 667766543 3468999999999999 43 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.......+. ..+... ....+ .....+.+++.+||..+|.+|+.
T Consensus 203 f~~~~~~~~~---------------------~~i~~~-~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 203 FYDSNTMKTY---------------------EKILNA-ELRFPPFFNEDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp TCCSSHHHHH---------------------HHHHHC-CCCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred CCCCCHHHHH---------------------HHHHhC-CCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 9765433111 000000 00000 11123778999999999999994
No 252
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.38 E-value=3.9e-14 Score=140.35 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=71.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .++.+||+.|||||++ .+ ..++.++|||||||+||+|++|+
T Consensus 200 ~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 261 (400)
T 1nxk_A 200 NAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVL------GP---------EKYDKSCDMWSLGVIMYILLCGYP 261 (400)
T ss_dssp TCCEEECCCTTCEECC--------------CTTCCGGGS------CC---------CCSSSHHHHHHHHHHHHHHHHSSC
T ss_pred CccEEEEecccccccCCCCc---cccCCCCCCccCHhhc------CC---------CCCCCcccHHHHHHHHHHHHhCCC
Confidence 4678998 66776654322 5578999999999998 43 67889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
||.......+. ..............+..........+.+++.+||..+|.+||++.++.++
T Consensus 262 pf~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 262 PFYSNHGLAIS-------------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp SCCCCTTCSSC-------------CSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCCcccccc-------------HHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 99865332110 00000000000000000011122347889999999999999998887763
No 253
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.38 E-value=5.2e-14 Score=136.90 Aligned_cols=114 Identities=17% Similarity=0.216 Sum_probs=66.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++...... .....+||+.|||||++ .+ ..+++++|||||||+||+|++|+
T Consensus 187 ~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 248 (349)
T 2w4o_A 187 DAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEIL------RG---------CAYGPEVDMWSVGIITYILLCGFE 248 (349)
T ss_dssp TCCEEECCCC-------------------CGGGSCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEccCccccccCccc---ccccccCCCCccCHHHh------cC---------CCCCcccchHHHHHHHHHHHhCCC
Confidence 4567888 5666655432 24568999999999999 44 56789999999999999999999
Q ss_pred ccchhhhhh-ee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDY-IR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||....... +. .+. ... .....+ ........+.+++.+||..+|.+||++.++.+
T Consensus 249 pf~~~~~~~~~~~~i~--~~~----~~~~~~------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 249 PFYDERGDQFMFRRIL--NCE----YYFISP------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTCCTTCHHHHHHHHH--TTC----CCCCTT------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCCcccHHHHHHHH--hCC----CccCCc------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 997643221 11 000 000 000000 00112224778999999999999999888765
No 254
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.38 E-value=6.7e-14 Score=137.26 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=77.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++.+.+... ....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 226 ~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~p 287 (373)
T 2x4f_A 226 KQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVV------NY---------DFVSFPTDMWSVGVIAYMLLSGLSP 287 (373)
T ss_dssp TEEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHH------TT---------CBCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CcEEEEeCCCceecCCccc---cccccCCCcEeChhhc------cC---------CCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 357888 67777665543 4457899999999998 43 56788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.....+. .+. ... +.. +..........+.+++.+||..+|.+||++.++.+
T Consensus 288 f~~~~~~~~~~~i~-~~~------~~~-----------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 288 FLGDNDAETLNNIL-ACR------WDL-----------EDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TCCSSHHHHHHHHH-HTC------CCS-----------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHH-hcc------CCC-----------ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9875433111 000 000 000 00001112234788999999999999999888765
No 255
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.38 E-value=1.8e-13 Score=128.26 Aligned_cols=115 Identities=22% Similarity=0.297 Sum_probs=71.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++...... .....||+.|||||++ .+ ..+++++||||||+++|+|++|+
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~g~~ 212 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVI------RA---------SMFSKGSDVWSYGVLLWELLTGEV 212 (271)
T ss_dssp SCCEEECCCCC-----------------CCGGGSCHHHH------HH---------CCCSHHHHHHHHHHHHHHHHHCCC
T ss_pred CcceEEccCCccccccccc----ccCCCCccceeCHHHh------cc---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 5668888 5556555443 3357899999999998 32 45778999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||......... ..... . .... ........+.+++.+||..+|.+||++.++.+.+.+
T Consensus 213 p~~~~~~~~~~~~~~~~-~------~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 213 PFRGIDGLAVAYGVAMN-K------LALP-------------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TTTTSCHHHHHHHHHTS-C------CCCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCCHHHHHHhhhcC-C------CCCC-------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 99875333111 00000 0 0000 000111237789999999999999999998887654
No 256
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.38 E-value=1.3e-13 Score=132.82 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=75.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
.-+|+. |+++.+.............||+.|||||++ .+ ..+++++|||||||+||+|++ |+
T Consensus 154 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~~g~~ 218 (327)
T 3lzb_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI------LH---------RIYTHQSDVWSYGVTVWELMTFGSK 218 (327)
T ss_dssp TEEEECCTTC----------------CCCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEccCcceeEccCccccccccCCCccccccCHHHH------cC---------CCCChHHHHHHHHHHHHHHHHCCCC
Confidence 457888 667776655444445567889999999999 32 557789999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
||.+.....+........ .. .........+.+++.+||..+|.+||++.++.+.+.++..
T Consensus 219 p~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 219 PYDGIPASEISSILEKGE-----RL---------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTTTCCGGGHHHHHHTTC-----CC---------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHcCC-----CC---------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 998754442110000000 00 0001122247789999999999999999999998888764
Q ss_pred C
Q 009274 168 K 168 (538)
Q Consensus 168 ~ 168 (538)
.
T Consensus 279 ~ 279 (327)
T 3lzb_A 279 D 279 (327)
T ss_dssp S
T ss_pred C
Confidence 4
No 257
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.38 E-value=1.4e-13 Score=134.78 Aligned_cols=119 Identities=17% Similarity=0.275 Sum_probs=77.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ....+||+.|||||++...... ....++.++|||||||+||+|++|+ |
T Consensus 237 ~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~Di~slG~il~ell~g~~p 304 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDE---------THPGYGKEVDLWACGVILFTLLAGSPP 304 (365)
T ss_dssp CCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCT---------TSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccc---------cCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence 456787 56676665432 4568999999999998332211 1245788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+. ........ .........+.+++.+||..+|.+||++.++.+
T Consensus 305 f~~~~~~~~~~~i~----------~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 305 FWHRRQILMLRMIM----------EGQYQFSS--------PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SCCSSHHHHHHHHH----------HTCCCCCH--------HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHHH----------hCCCCCCC--------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 9765333111 000 00000000 001122234788999999999999999888765
No 258
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.37 E-value=8.2e-14 Score=134.34 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=72.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+..... .....||+.|||||++ .+ ..+++++|||||||+||+|++|+
T Consensus 170 ~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~ 231 (327)
T 3lm5_A 170 LGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEIL------NY---------DPITTATDMWNIGIIAYMLLTHTS 231 (327)
T ss_dssp BCCEEECCGGGCEEC------------CCCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeeCccccccCCccc---cccccCCcCccCCeee------cC---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 4568888 56666654432 4568999999999999 43 56789999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||......... .+... . .. .+..........+.+++.+||..+|.+||++.++.+
T Consensus 232 pf~~~~~~~~~~~i~~~-~-----~~------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 232 PFVGEDNQETYLNISQV-N-----VD------------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp SSCCSSHHHHHHHHHHT-C-----CC------------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCCCchHHHHHHHhc-c-----cc------------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 99775433111 00000 0 00 000000111223778999999999999999887654
No 259
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.37 E-value=2.3e-13 Score=131.88 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=70.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ..++.+||+.|||||++ .+ ..++.++|+|||||+||||++|+ |
T Consensus 147 g~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~p 209 (345)
T 3a8x_A 147 GHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSP 209 (345)
T ss_dssp SCEEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEeccccccccCCCC--cccccCCCccccCcccc------CC---------CCCChHHhHHHHHHHHHHHHhCCCC
Confidence 457888 66665332222 15578999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|......... ...........+... ....+ .....+.+++.+||..+|.+||++
T Consensus 210 f~~~~~~~~~------------~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 210 FDIVGSSDNP------------DQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TTTTTC-------------------CHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred cCCccccccc------------ccccHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 9753111000 000000000000000 00011 112347889999999999999986
No 260
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.37 E-value=1.1e-13 Score=139.80 Aligned_cols=65 Identities=17% Similarity=0.357 Sum_probs=46.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+...... ..+..+||+.|||||++ .| ..++.++|||||||+||+|++|+
T Consensus 200 ~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~ 261 (464)
T 3ttj_A 200 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMVRHKI 261 (464)
T ss_dssp TSCEEECCCCCC-----CC---CC----CCCTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHH------cC---------CCCCHHHHHHHHHHHHHHHHhCCC
Confidence 3467888 6777665432 25679999999999999 44 56889999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||.+..
T Consensus 262 pF~g~~ 267 (464)
T 3ttj_A 262 LFPGRD 267 (464)
T ss_dssp SSCCSS
T ss_pred CCCCCC
Confidence 998754
No 261
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.37 E-value=2.4e-13 Score=130.09 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=71.1
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhhc
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (538)
..+||+.|||||++ .+ ..+++++|||||||+||+|++|. ||......... ..
T Consensus 181 ~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~------------~~ 233 (310)
T 3s95_A 181 TVVGNPYWMAPEMI------NG---------RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD------------FG 233 (310)
T ss_dssp CCCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT------------SS
T ss_pred ccCCCcceeCHHHh------cC---------CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH------------Hh
Confidence 57899999999999 44 56789999999999999999999 88765333111 00
Q ss_pred chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
. ....... ..........+.+++.+||+.+|.+||+..++.+.+..+.
T Consensus 234 ~---~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 234 L---NVRGFLD---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp B---CHHHHHH---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h---hhhcccc---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0 0011010 0011223345889999999999999999999888777654
No 262
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.37 E-value=2.4e-10 Score=110.25 Aligned_cols=230 Identities=11% Similarity=0.078 Sum_probs=148.7
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..|.+++|+ +..++..+.++.++.| .++....+..+...+.+++|++++ .+++++..++.|.+||..++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEE
Confidence 345666776 4556666778899999 456677777787888999998855 4777888899999999876542211
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCC----CcEEEEECCCCceeEEec--CCCCCeEEEEEe-CC-EEEEEec--
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGD----RTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC-NG-VLYSGSR-- 400 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~-~l~s~s~-- 400 (538)
.. ... ......+++++++++++...+ +.|.+||..+++....+. .+...+.+++++ ++ ++++...
T Consensus 82 ~~---~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 82 FV---SHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp EE---CSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred ee---CCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 10 111 112244677888877776666 689999998876553332 345678999998 44 4444432
Q ss_pred ----CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeCCc---ceeee--------cccc
Q 009274 401 ----DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDK---FMKSM--------QTHK 464 (538)
Q Consensus 401 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~---~~~~~--------~~h~ 464 (538)
.+.|..+|..+++........ .. ...++++|+++.++.+ +.++.|.+||... ....+ .++
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~--~~-~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQNI--SV-ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEEE--SS-EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred ccCCCceEEEEeCCCCEEEEeecCC--Cc-ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 355667776655543322211 12 2336899999866544 5678999999632 22211 112
Q ss_pred ceEEEEEe--CCCEEEEEeCCCeEEEEecCCCe
Q 009274 465 GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (538)
Q Consensus 465 ~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~ 495 (538)
.....+.+ +|+++++...++.|.+||..+..
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCCCCE
Confidence 34555665 78888887788999999986443
No 263
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.37 E-value=1.1e-13 Score=130.19 Aligned_cols=113 Identities=18% Similarity=0.215 Sum_probs=75.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++.+.+... .....||+.|+|||++ .| .+++++||||||+++|+|++|+
T Consensus 145 ~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~------~~----------~~~~~~Di~slG~~l~~l~~g~~ 205 (277)
T 3f3z_A 145 DSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVL------EG----------LYGPECDEWSAGVMMYVLLCGYP 205 (277)
T ss_dssp TCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHH------TT----------CBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEecccceeccCccc---hhccCCCCCccChHHh------cc----------cCCchhhehhHHHHHHHHHHCCC
Confidence 3567888 55666554432 4568899999999998 33 4789999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.......+. .+. ......... ........+.+++.+||+.+|.+||++.++.+
T Consensus 206 p~~~~~~~~~~~~~~----------~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 206 PFSAPTDSEVMLKIR----------EGTFTFPEK--------DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp SSCCSSHHHHHHHHH----------HCCCCCCHH--------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCCCHHHHHHHHH----------hCCCCCCch--------hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99875443111 000 000000000 01112234788999999999999999887664
No 264
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.37 E-value=8.9e-14 Score=133.14 Aligned_cols=122 Identities=20% Similarity=0.224 Sum_probs=69.2
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+-.|+. |+++.+....... .....+||+.|||||++ .+ ..+++++|||||||++|+|+||+
T Consensus 153 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~ll~g~~ 217 (311)
T 3ork_A 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA------RG---------DSVDARSDVYSLGCVLYEVLTGEP 217 (311)
T ss_dssp SCEEECCCSCC------------------CCTTCCHHHH------HT---------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEeeccCcccccccccccccccccCcCcccCCHHHh------cC---------CCCCchHhHHHHHHHHHHHHhCCC
Confidence 457888 5666555432221 13357899999999999 44 56788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH-HHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW-KCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~-~~l~~l 165 (538)
||.+.....+.... ......... .........+.+++.+||+.+|.+||+..+.. ..+.+.
T Consensus 218 pf~~~~~~~~~~~~---------~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 218 PFTGDSPVSVAYQH---------VREDPIPPS--------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp SCCCSSHHHHHHHH---------HHCCCCCHH--------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHH---------hcCCCCCcc--------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99876444211000 000000000 00111223478899999999999999876544 334443
No 265
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.37 E-value=2.7e-13 Score=131.77 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=82.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+++.+.............||+.|||||++ .+ ..+++++|||||||+||+|+| |.
T Consensus 209 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL------FE---------GIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred CcEEeCCCccCcccccCccceeccCccCccCccCHHHh------cc---------CCCChhHhHHHHHHHHHHHHcCCCC
Confidence 467888 666666555433334568899999999998 22 457789999999999999998 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+....... . ......... ........+.+++.+||..+|.+||++.++.+.+..++
T Consensus 274 p~~~~~~~~~~-------------~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 274 PYPGIPVDANF-------------Y-------KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp SSTTCCCSHHH-------------H-------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CcccCCcHHHH-------------H-------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 99875322100 0 000000000 00111234788999999999999999999999888876
Q ss_pred c
Q 009274 167 I 167 (538)
Q Consensus 167 ~ 167 (538)
.
T Consensus 334 ~ 334 (344)
T 1rjb_A 334 A 334 (344)
T ss_dssp -
T ss_pred H
Confidence 3
No 266
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.37 E-value=5.6e-13 Score=127.34 Aligned_cols=128 Identities=16% Similarity=0.263 Sum_probs=79.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...............||+.|||||++ .| .+++++||||||+++|+|++|. |
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~------~~----------~~~~~~Dv~slG~il~~l~~g~~p 233 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL------RG----------EITPKSDIYSFGVVLLEIITGLPA 233 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHH------TT----------EECTHHHHHHHHHHHHHHHHCCCS
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHh------cC----------CCCccchhHHHHHHHHHHHHCCCC
Confidence 457888 555555443322224457899999999998 33 4678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhc----CccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFG----SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|......... .+... ....... .......... .....+.+++.+||..+|.+||++.++.+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 234 VDEHREPQLLLDIKEE-------IEDEEKT----IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp BCTTBSSSBTTHHHHH-------HHTTSCC----HHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cccCcchHHHHHHHHH-------hhhhhhh----hhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 9875433111 00000 0000000 0000000000 00112778999999999999999999998887
Q ss_pred Hhh
Q 009274 164 ELI 166 (538)
Q Consensus 164 ~l~ 166 (538)
++.
T Consensus 303 ~l~ 305 (307)
T 2nru_A 303 EMT 305 (307)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 267
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.36 E-value=1.6e-13 Score=140.09 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=73.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+...... ...++||+.|||||++ .+ ..++.++|+|||||+||||+||+
T Consensus 325 ~g~vkL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l------~~---------~~~~~~~DiwSlGvilyelltG~~ 387 (543)
T 3c4z_A 325 DGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELL------LG---------EEYDFSVDYFALGVTLYEMIAARG 387 (543)
T ss_dssp TSCEEECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEeecceeeeccCCCcc--cccccCCccccChhhh------cC---------CCCChHHhcCcchHHHHHHHhCCC
Confidence 3567888 677776654322 3457999999999999 44 56889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||.+...... .. .....+..............+.+++.+||..+|.+||+..
T Consensus 388 PF~~~~~~~~-------------~~----~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 388 PFRARGEKVE-------------NK----ELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp SSCCTTCCCC-------------HH----HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred CCCCCccchh-------------HH----HHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 9987532200 00 0000010000000011223478899999999999999753
No 268
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.36 E-value=1.1e-13 Score=130.61 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=76.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |++....+... .....||+.|||||++ .+ ..++.++||||||+++|+|++|+ |
T Consensus 145 ~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~g~~p 206 (284)
T 3kk8_A 145 AAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVL------KK---------DPYSKPVDIWACGVILYILLVGYPP 206 (284)
T ss_dssp CCEEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEeeceeeEEcccCcc---ccCCCCCcCCcCchhh------cC---------CCCCcccchHHHHHHHHHHHHCCCC
Confidence 447888 55665554432 4568999999999999 44 56788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+... ... .+..........+.+++.+||..+|.+||++.++.+
T Consensus 207 f~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 207 FWDEDQHRLYAQIKAG-------AYD-----------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp SCCSSHHHHHHHHHHT-------CCC-----------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCchhHHHHHHHhc-------ccc-----------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 9765433111 00000 000 000001112234778999999999999999888765
No 269
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.36 E-value=1.2e-13 Score=141.02 Aligned_cols=114 Identities=19% Similarity=0.214 Sum_probs=77.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
....|+. |+|+....... ....+||+.|||||++ . ..+++++|||||||++|+|++|+
T Consensus 175 ~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l------~----------~~~~~~~DiwslG~il~~ll~g~~ 235 (494)
T 3lij_A 175 DALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVL------R----------KKYDEKCDVWSIGVILFILLAGYP 235 (494)
T ss_dssp TCCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHH------T----------TCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHH------c----------ccCCCchhHHHHHHHHHHHHhCCC
Confidence 3457888 66776665432 5578999999999998 2 35789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+........ .....+ ........+.+++.+||..+|.+||++.++.+
T Consensus 236 pf~~~~~~~~~~~i~~~~-----~~~~~~------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 236 PFGGQTDQEILRKVEKGK-----YTFDSP------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SSCCSSHHHHHHHHHHTC-----CCCCSG------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCHHHHHHHHHhCC-----CCCCch------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 998765442220000000 000000 01112234778999999999999999887664
No 270
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.36 E-value=3.2e-13 Score=129.59 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=82.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||++|+|+| |.
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI------FD---------RVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhh------cc---------ccccchhHHHHHHHHHHHHHhCCC
Confidence 3457888 566666544333334468899999999998 22 457789999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... ........... .......+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 249 ~p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 249 SPYPGVKIDEEF--------------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CSSTTCCCSHHH--------------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcccchhHHH--------------------HHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99764322000 00000000000 011223478899999999999999999999988887
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 309 ~ 309 (316)
T 2xir_A 309 L 309 (316)
T ss_dssp H
T ss_pred H
Confidence 6
No 271
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.36 E-value=3.4e-13 Score=130.41 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=81.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+...|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||+|+| |.
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~ 264 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI------FD---------CVYTVQSDVWSYGILLWEIFSLGL 264 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHh------cc---------CCCChHHHHHHHHHHHHHHHcCCC
Confidence 3467888 566666554433334467889999999998 22 457789999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... ........... .......+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 265 ~p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 265 NPYPGILVNSKF--------------------YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp CSSTTCCSSHHH--------------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcccchhHHH--------------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 99864322000 00000000000 011122478899999999999999999998888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 325 ~ 325 (333)
T 2i1m_A 325 A 325 (333)
T ss_dssp H
T ss_pred H
Confidence 4
No 272
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.36 E-value=3.3e-13 Score=129.27 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=81.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...............||+.|||||++ .+ ..+++++|||||||+||+|+| |+
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~ 246 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI------FN---------CVYTFESDVWSYGIFLWELFSLGSS 246 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHh------cC---------CCCChHHHHHHHHHHHHHHHhCCCC
Confidence 457888 566666655433334467889999999998 22 457789999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||......... ........... .......+.+++.+||..+|.+||++.++.+.+.+++
T Consensus 247 p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 247 PYPGMPVDSKF--------------------YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp SSTTCCSSHHH--------------------HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccchhHH--------------------HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 99765322000 00000000000 0112234788999999999999999999999888876
No 273
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.36 E-value=6.8e-14 Score=137.62 Aligned_cols=113 Identities=19% Similarity=0.246 Sum_probs=76.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ....+||+.|||||++ .+ ..++.++|||||||+||+|++|. |
T Consensus 188 ~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltg~~P 249 (387)
T 1kob_A 188 SSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIV------DR---------EPVGFYTDMWAIGVLGYVLLSGLSP 249 (387)
T ss_dssp CCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHH------TT---------CCBCHHHHHHHHHHHHHHHHHSCCS
T ss_pred CceEEEecccceecCCCcc---eeeeccCCCccCchhc------cC---------CCCCCcccEeeHhHHHHHHHhCCCC
Confidence 457888 67777665432 4457899999999999 43 56788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.....+. .+.. .. +.. +..........+.+++.+||..+|.+||++.++.+
T Consensus 250 f~~~~~~~~~~~i~~-~~------~~~-----------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 250 FAGEDDLETLQNVKR-CD------WEF-----------DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp SCCSSHHHHHHHHHH-CC------CCC-----------CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHh-CC------CCC-----------CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 9875433111 0000 00 000 00000111224788999999999999999887765
No 274
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.36 E-value=2.4e-13 Score=134.46 Aligned_cols=49 Identities=31% Similarity=0.637 Sum_probs=40.0
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhh
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELI 94 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~ 94 (538)
.++.+||+.|||||++ .| ...++.++|||||||+||||++|+ ||.+...
T Consensus 187 ~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 187 LTDYVATRWYRAPEIL------LG--------STKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp ---CCCGGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccCCcccCCcCCHHHh------cC--------CCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 5678999999999999 33 246789999999999999999999 9987543
No 275
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.36 E-value=2.7e-13 Score=133.65 Aligned_cols=120 Identities=15% Similarity=0.188 Sum_probs=83.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++.+.............||+.|||||++ .+ ..++.++|||||||+||+|++ |.
T Consensus 227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ellt~g~ 291 (382)
T 3tt0_A 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL------FD---------RIYTHQSDVWSFGVLLWEIFTLGG 291 (382)
T ss_dssp TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH------HS---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEcccCcccccccccccccccCCCCCcceeCHHHh------cC---------CCCCchhHHHHHHHHHHHHHhCCC
Confidence 3568888 667766554332234567899999999999 43 567899999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+... +....... .......+.+++.+||+.+|.+||++.++.+.+.++
T Consensus 292 ~p~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 292 SPYPGVPVEELFKL---------------------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp CSSTTCCHHHHHHH---------------------HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHH---------------------HHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9987544311100 00000000 011223478899999999999999999999988887
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 351 ~ 351 (382)
T 3tt0_A 351 V 351 (382)
T ss_dssp H
T ss_pred H
Confidence 6
No 276
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.36 E-value=1.1e-13 Score=133.44 Aligned_cols=112 Identities=21% Similarity=0.272 Sum_probs=76.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++...+... ....+||+.|||||++ .| ....++++|||||||+||+|++|+ |
T Consensus 145 ~~~kl~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~P 207 (336)
T 3h4j_B 145 LNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVI------NG--------KLYAGPEVDVWSCGIVLYVMLVGRLP 207 (336)
T ss_dssp CCEEECCSSCTBTTTTSBT---TCCCTTSTTTSCGGGS------CC--------SGGGCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEEeccceeccCCcc---cccccCCcCcCCHHHH------cC--------CCCCCCccchhHHHHHHHHHHhCCCC
Confidence 457888 66776655432 5678999999999998 43 122368999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|.......+.... ... ....+. .....+.+++.+||..+|.+||++.++.+.
T Consensus 208 f~~~~~~~~~~~i-~~~-----~~~~p~---------------~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 208 FDDEFIPNLFKKV-NSC-----VYVMPD---------------FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SBCSSSTTCBCCC-CSS-----CCCCCT---------------TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCccHHHHHHHH-HcC-----CCCCcc---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 9886554322000 000 000010 011236789999999999999999887653
No 277
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.36 E-value=3e-13 Score=129.92 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=75.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... .....||+.|||||++ .+ ..+++++|||||||+||+|++|+ |
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~~g~~p 240 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVI------SR---------SLYATEVDIWSLGIMVIEMVDGEPP 240 (321)
T ss_dssp CCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CcEEEeeeeeeeecccCccc--cccccCCccccCHhhh------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 556666543221 4568999999999999 43 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh---hcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK---FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ..+....... .......+.+++.+||..+|.+||++.++.+
T Consensus 241 f~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 241 YFSDSPVQAM---------------------KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp TTTSCHHHHH---------------------HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHH---------------------HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9765433111 0000000000 0011223778999999999999999887655
No 278
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.36 E-value=1.4e-13 Score=130.19 Aligned_cols=116 Identities=23% Similarity=0.271 Sum_probs=76.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++..... .....||+.|+|||++ .+ ....+++++|||||||++|+|++|+ ||
T Consensus 167 ~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~------~~-------~~~~~~~~~Di~slG~~l~~l~~g~~pf 228 (287)
T 4f0f_A 167 CAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETI------GA-------EEESYTEKADTYSFAMILYTILTGEGPF 228 (287)
T ss_dssp CEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGS------SC-------SSCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred eEEeCCCCcccccccc-----ccccCCCccccCchhh------cc-------CCCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence 37888 556554433 4468999999999987 32 2355778999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
......... .. ............ ......+.+++.+||+.+|.+||++.++.+.+.+
T Consensus 229 ~~~~~~~~~------------~~------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 229 DEYSYGKIK------------FI------NMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp TTCCCCHHH------------HH------HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ccccccHHH------------HH------HHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 764332110 00 000000000000 1112247889999999999999999998887654
No 279
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.36 E-value=4.4e-13 Score=128.16 Aligned_cols=132 Identities=14% Similarity=0.178 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++........ .+..+||+.|||||++ .| ...++.++|||||||++|+|++|+ |
T Consensus 156 ~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~p 219 (311)
T 3niz_A 156 GALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVL------MG--------SKKYSTSVDIWSIGCIFAEMITGKPL 219 (311)
T ss_dssp CCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEccCcCceecCCCccc--ccCCcccCCcCCHHHh------cC--------CCCCCchHHhHHHHHHHHHHHhCCCC
Confidence 457888 566665533222 4567999999999998 33 245788999999999999999999 9
Q ss_pred cchhhhhhee-e----ccccccCcchhhcchhhHHHHHHHH----H-HHhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 89 FTKELIDYIR-C----VSTKASDDNIACLGMYMAWMEKVTY----L-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 89 f~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|.+....... . +..... ...........+...... . .....+....++.+++.+||..+|.+||++.++
T Consensus 220 f~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 220 FPGVTDDDQLPKIFSILGTPNP-REWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp CCCSSTTTHHHHHHHHHCCCCT-TTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCCCChHHHHHHHHHHHCCCCh-HHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9864333111 0 000000 000000000000000000 0 000001112347789999999999999998876
Q ss_pred HH
Q 009274 159 WK 160 (538)
Q Consensus 159 ~~ 160 (538)
.+
T Consensus 299 l~ 300 (311)
T 3niz_A 299 MN 300 (311)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 280
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.36 E-value=2.1e-13 Score=132.59 Aligned_cols=117 Identities=16% Similarity=0.076 Sum_probs=72.9
Q ss_pred eeeec--cccccccccch--hhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 13 VAKVG--CVGSRICDKEV--GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.+|+. |+++.+..... ........||+.|||||++ .+ ....+++++|||||||+||+|++|+
T Consensus 208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~-------~~~~~~~~~DiwslG~il~el~~g~~ 274 (345)
T 3hko_A 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL------NT-------TNESYGPKCDAWSAGVLLHLLLMGAV 274 (345)
T ss_dssp CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHH------TC-------SSSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred eEEEeeccccccccccCccccccccccCCCccccCchhh------cc-------CCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 67888 56665543221 1124568899999999999 33 2356788999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+....... .+.. .. .....+ ........+.+++.+||+.+|.+||++.++.+
T Consensus 275 pf~~~~~~~~~~~~~~-~~-----~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 275 PFPGVNDADTISQVLN-KK-----LCFENP------------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp SSCCSSHHHHHHHHHH-CC-----CCTTSG------------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCCCCChHHHHHHHHh-cc-----cccCCc------------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99765333111 0000 00 000000 00011224778999999999999999888765
No 281
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.36 E-value=2.9e-13 Score=131.14 Aligned_cols=138 Identities=16% Similarity=0.183 Sum_probs=78.7
Q ss_pred eeeeec--cccccccccc------hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhh
Q 009274 12 SVAKVG--CVGSRICDKE------VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSL 83 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~l 83 (538)
+.+|+. |+++.+.... ........+||+.|||||++ .|.. .......+++++|||||||+||||
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~--~~~~~~~~~~~~DiwslG~il~el 228 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL------EGAV--NLRDXESALKQVDMYALGLIYWEI 228 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHH------TTCC--CGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccCccccccccccCCCccceeCchhh------cCCc--ccccccccccccchHHHHHHHHHH
Confidence 467888 5666554321 11123457899999999999 3310 000113566889999999999999
Q ss_pred hhcC-ccchh-hhhhee-eccccccCcchhhcchhhHHHHHHHHHHH-hhhcCcc-----------chHHHHHhhhhccC
Q 009274 84 LIGE-QFTKE-LIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLE-NKFGSEF-----------VSLQLMFCQCLNFD 148 (538)
Q Consensus 84 ltg~-pf~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~l~~~~~~~l~~~ 148 (538)
++|. ||... ...... .... .....+.... ...... ......+ ..+.+++.+||..+
T Consensus 229 l~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (336)
T 3g2f_A 229 FMRCTDLFPGESVPEYQMAFQT--------EVGNHPTFED-MQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299 (336)
T ss_dssp HTTBGGGSTTSCCCCCCCTTHH--------HHCSSCCHHH-HHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSS
T ss_pred HhcCCcCCCccchhHHHHhhhc--------ccCCCchHHH-HHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCC
Confidence 9998 65432 222110 0000 0000000000 111100 0000111 13888999999999
Q ss_pred CCCCcchhhHHHHHHHhh
Q 009274 149 PGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 149 p~~r~~~~~~~~~l~~l~ 166 (538)
|.+||++.++.+.+..++
T Consensus 300 P~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 300 AEARLTAQXAEERMAELM 317 (336)
T ss_dssp GGGSCCHHHHHHHHHHHH
T ss_pred hhhCcchHHHHHHHHHHH
Confidence 999999999999888876
No 282
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.35 E-value=2.1e-13 Score=130.79 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=81.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...............||+.|||||++ .+ ..+++++|||||||++|+|+| |.
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL------FD---------HIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEccccccccccccccceeccCCCCcccccChhhh------cC---------CCcCchhhHHHHHHHHHHHHhCCCC
Confidence 357888 566666544333224457889999999998 22 457789999999999999999 98
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+..... . .........+.+++.+||+.+|.+||++.++.+.+.+++
T Consensus 252 p~~~~~~~~~~~~~~~~~~------~---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 252 PYPGIPPERLFNLLKTGHR------M---------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp SSTTCCGGGHHHHHHTTCC------C---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhcCCc------C---------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99875444211 0000000 0 000111234788999999999999999999999888875
No 283
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.35 E-value=1.4e-13 Score=136.16 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=76.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+.+...... ...+.+||+.|||||++.... ....++.++|||||||+||||++|+
T Consensus 204 ~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~-----------~~~~~~~~~DiwSlGvilyell~G~~ 271 (410)
T 3v8s_A 204 SGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLYEMLVGDT 271 (410)
T ss_dssp TSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTT-----------TTCEEETHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccC-----------CCcCCCCcceEecchHHHHHHHhCCC
Confidence 3467888 667766544321 134689999999999992111 1133788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCC--CcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~--r~~~~~~~~ 160 (538)
||.+.+...+. ............+........+.+++.+||..+|.+ |+++.++.+
T Consensus 272 Pf~~~~~~~~~-----------------~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 272 PFYADSLVGTY-----------------SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp TTCCSSHHHHH-----------------HHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred CCCCCChhhHH-----------------HHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 99876544111 000000000000001112234788999999988888 888877665
No 284
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.35 E-value=3.4e-13 Score=132.16 Aligned_cols=116 Identities=14% Similarity=0.047 Sum_probs=78.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..+|+. |+|+.+.........+..+||+.|||||++ .| ..+++++|||||||+||||+||+
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~ 283 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML------SN---------KPWNYQIDYFGVAATVYCMLFGTY 283 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH------TT---------CCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh------cC---------CCCCccccHHHHHHHHHHHHhCCC
Confidence 5678998 677665433333336678999999999999 44 56889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc-hhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~-~~~~~~~l~~l~ 166 (538)
||......... + . . ...... .++ .+.+++.+||+.+|.+|++ ..++.+.+..++
T Consensus 284 pf~~~~~~~~~-~----~-~---~~~~~~-----~~~-----------~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 284 MKVKNEGGECK-P----E-G---LFRRLP-----HLD-----------MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp CCEEEETTEEE-E----C-S---CCTTCS-----SHH-----------HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcee-e----c-h---hccccC-----cHH-----------HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 99765443111 0 0 0 000000 011 2567889999999999976 455666566554
No 285
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.35 E-value=7.1e-13 Score=130.39 Aligned_cols=62 Identities=26% Similarity=0.550 Sum_probs=47.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++..... .+...||+.|||||++ .+ ..+++++|||||||+||+|+||+ |
T Consensus 175 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~p 234 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVL------LG---------APWGCGADIWSTACLIFELITGDFL 234 (373)
T ss_dssp EEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHH------HT---------CCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred ceEEEcccccccccCCC-----CCCCCCCccccCcHHH------hC---------CCCCchHhHHHHHHHHHHHHhCCCC
Confidence 367888 566665543 3467999999999999 44 45789999999999999999999 9
Q ss_pred cchhh
Q 009274 89 FTKEL 93 (538)
Q Consensus 89 f~~~~ 93 (538)
|.+..
T Consensus 235 f~~~~ 239 (373)
T 1q8y_A 235 FEPDE 239 (373)
T ss_dssp C----
T ss_pred CCCCc
Confidence 98643
No 286
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.35 E-value=1.5e-13 Score=132.16 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=74.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++.+............+||+.|||||++ .+ ....+.++|||||||+||+|++|+ |
T Consensus 142 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~p 207 (323)
T 3tki_A 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL------KR--------REFHAEPVDVWSCGIVLTAMLAGELP 207 (323)
T ss_dssp CCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHH------HC--------SSBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEEeeccceeccCCcccccCCCccCcCccCcHHh------cc--------CCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 457888 566655433333335578999999999999 33 122367899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|................ ..... ........+.+++.+||..+|.+||++.++.+
T Consensus 208 f~~~~~~~~~~~~~~~~------~~~~~------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 208 WDQPSDSCQEYSDWKEK------KTYLN------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp CSSSCTTSHHHHHHHTT------CTTST------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCchHHHHHHHHhcc------cccCC------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 98653321000000000 00000 00111223678999999999999999887654
No 287
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=3.6e-09 Score=103.39 Aligned_cols=256 Identities=11% Similarity=-0.034 Sum_probs=160.2
Q ss_pred cEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc---------CCCcEEEEEccCCCCCcceeeecccCC--ce
Q 009274 273 SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEKD--WR 341 (538)
Q Consensus 273 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~ 341 (538)
+|.++|..+++.+.++.....+ .++++|+++.++++.. .++.|.+||..+.+....+........ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7899999999998888765554 9999998776666543 467899999986554433322100000 01
Q ss_pred eeeEEEEeecCCEEEEeeC--CCcEEEEECCCCceeEE-ecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEE
Q 009274 342 YSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVL 418 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 418 (538)
...-..++|||++|++++. ++.|.++| .+++.+.. +... ..+.-....+..+++.+.||.+.++|. +++.....
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~ 202 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAG 202 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEE
Confidence 1124589999999998874 57899999 99998877 6432 222111122456777889999999999 88776433
Q ss_pred ec----CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc----eeeecc------------ccceEEEEEeCCCEEE
Q 009274 419 EE----DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----MKSMQT------------HKGSVFAVFLEGKWLF 478 (538)
Q Consensus 419 ~~----~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~------------h~~~v~~~~~~~~~l~ 478 (538)
.. ...........+.+++..++..+.++.+.+.|.... ...+.. .......++++++.++
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 21 111111111345555555444457788999986421 122211 1111234556888777
Q ss_pred EEeC----------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE--EEEEE-CCCeEEEEEcCC
Q 009274 479 TGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGC-ADRTVKVYYYGK 538 (538)
Q Consensus 479 sgs~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~sg~-~dg~v~vw~~~~ 538 (538)
.+.. ++.|.++|+.+.+......... ......+.+|++ ++++. .++.|.+||..+
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 7653 3579999999998766554321 234455556664 66666 589999999753
No 288
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.35 E-value=1.8e-13 Score=131.73 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=74.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+++...............||+.|||||++ .+ ..++.++|||||||++|+|++ |+
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~~g~~ 238 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL------AD---------NLYTVHSDVWAFGVTMWEIMTRGQT 238 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhh------cC---------CCCCCccchhhHHHHHHHHHhCCCC
Confidence 467888 666666554433234457789999999998 32 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+.... .. .........+.+++.+||..+|.+||++.++.+.+.+++
T Consensus 239 p~~~~~~~~~~~~~~~~~------~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 239 PYAGIENAEIYNYLIGGN------RL---------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp TTTTCCGGGHHHHHHTTC------CC---------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CccccChHHHHHHHhcCC------CC---------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99875443111 000000 00 000111224778999999999999999999999988887
Q ss_pred cCCCc
Q 009274 167 IKPEF 171 (538)
Q Consensus 167 ~~~~~ 171 (538)
..+..
T Consensus 298 ~~~~~ 302 (323)
T 3qup_A 298 GHLSV 302 (323)
T ss_dssp HC---
T ss_pred HHhhh
Confidence 55443
No 289
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.35 E-value=3.9e-11 Score=118.57 Aligned_cols=229 Identities=5% Similarity=-0.120 Sum_probs=139.3
Q ss_pred EEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEE-------------------EEEecCCCCEEEEE----
Q 009274 257 GLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMA-------------------VVYVDEDQPLCISG---- 311 (538)
Q Consensus 257 ~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~s~---- 311 (538)
.+.|+ +++|+.++.++.|++||+.+++.......+...... +.|+|++..+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 36788 889999999999999999988876666655543222 23445444332221
Q ss_pred cCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEee-cCCEEEEeeCC------CcEEEEECCCCceeEEecCC-CC
Q 009274 312 DSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGD------RTIKAWSLLDGTLSCTMSGH-KS 383 (538)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~h-~~ 383 (538)
..+..|++||+.++...... ... .......++| +++.++..+.+ ..|.+||+.+++........ ..
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~----~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 238 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH----QDT--AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGE 238 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE----EES--SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTE
T ss_pred CCcceEEEEECCCCcEEeec----cCC--cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCc
Confidence 35668999998765432211 111 1122447788 77766665543 46899998765543332311 23
Q ss_pred CeEEEEEe--CCEEEEEecC-----CcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEe------------
Q 009274 384 AVSTLAVC--NGVLYSGSRD-----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSH------------ 443 (538)
Q Consensus 384 ~v~~l~~~--~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~------------ 443 (538)
.+..++|+ ++.|+.++.+ +.|++||+.+++........ . .. ..|+| +++++++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~-~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--P-CS--HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--S-EE--EEEECSSSSEEEEEECCC---------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--C-CC--CCccCCCCceEEEecCCcceeeccccc
Confidence 57888999 4456665543 44999999988764433221 2 22 57888 999888765
Q ss_pred ----CCCcEEEEeCCc-ceeeeccccce-----------EE--EEEeCCCEEEEEeC-CCeEEE--EecCCCee
Q 009274 444 ----ESGSIKVWRNDK-FMKSMQTHKGS-----------VF--AVFLEGKWLFTGGW-DKTVSV--QELAGDEF 496 (538)
Q Consensus 444 ----~dg~i~iwd~~~-~~~~~~~h~~~-----------v~--~~~~~~~~l~sgs~-dg~v~i--wd~~~~~~ 496 (538)
.++.|++||... ....+..+... +. +++++|+.|+.++. ++...+ +++.++..
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred cccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 347899999543 23444444431 22 34558988887765 455444 45555543
No 290
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.35 E-value=3.1e-13 Score=134.37 Aligned_cols=69 Identities=20% Similarity=0.301 Sum_probs=45.2
Q ss_pred eeeeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 10 TKSVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
.++..|+. |+|+.+...... ......+||+.|||||++ .+ ...++.++|||||||+||+|++|
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g 232 (405)
T 3rgf_A 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGCIFAELLTS 232 (405)
T ss_dssp TTTCEEECCTTCCC----------------CCCTTCCHHHH------TT--------CCSCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhh------cC--------CCcccchhhhHHHHHHHHHHHhC
Confidence 34578898 677766543222 124468999999999999 43 13478899999999999999999
Q ss_pred C-ccchh
Q 009274 87 E-QFTKE 92 (538)
Q Consensus 87 ~-pf~~~ 92 (538)
+ ||.+.
T Consensus 233 ~~pf~~~ 239 (405)
T 3rgf_A 233 EPIFHCR 239 (405)
T ss_dssp SCTTCCC
T ss_pred CCCCCCc
Confidence 9 99754
No 291
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.35 E-value=2.4e-13 Score=130.91 Aligned_cols=122 Identities=18% Similarity=0.207 Sum_probs=79.2
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
...|+. |+++.+....... ......||+.|||||++ .+ ..++.++|||||||+||+|++ |+
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~~g~ 252 (325)
T 3kul_A 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI------AF---------RTFSSASDVWSFGVVMWEVLAYGE 252 (325)
T ss_dssp CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CCEEECCCCcccccccCccceeeccCCCCcccccCHhHh------cC---------CCCCcHHHHHHHHHHHHHHHcCCC
Confidence 467888 6666665432221 13346778999999999 32 457789999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+... . .. .........+.+++.+||..+|.+||++.++.+.+..+
T Consensus 253 ~p~~~~~~~~~~~~~~~~-~-------~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 253 RPYWNMTNRDVISSVEEG-Y-------RL-------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp CTTTTSCHHHHHHHHHTT-C-------CC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHcC-C-------CC-------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99775443111 00000 0 00 00011122478899999999999999999999998888
Q ss_pred hcCC
Q 009274 166 IIKP 169 (538)
Q Consensus 166 ~~~~ 169 (538)
...+
T Consensus 312 ~~~~ 315 (325)
T 3kul_A 312 IRSP 315 (325)
T ss_dssp HHSC
T ss_pred HhCc
Confidence 7443
No 292
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=3.4e-13 Score=131.53 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=69.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+...... .....+||+.|||||++ .| ....++.++|||||||+||+|++|+ |
T Consensus 196 ~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~-------~~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV------RG-------GDSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp SCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHH------TT-------CC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred CcEEEeeCCCCeecccCCCC-cccCcccCcCccChhhh------cC-------CCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 467888 667766544322 24468999999999999 33 1244678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|........ .. ....................+.+++.+||..+|.+||+
T Consensus 262 f~~~~~~~~-------------~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~ 310 (355)
T 1vzo_A 262 FTVDGEKNS-------------QA----EISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 310 (355)
T ss_dssp TSCTTSCCC-------------HH----HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred CccCCccch-------------HH----HHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcC
Confidence 975432200 00 00000000000000111223778999999999999994
No 293
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.34 E-value=1.4e-13 Score=134.76 Aligned_cols=63 Identities=21% Similarity=0.377 Sum_probs=50.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+|+..... .....||+.|||||++ .+ ..++.++|||||||+||+|+||+
T Consensus 198 ~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 257 (360)
T 3llt_A 198 STGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVI------LN---------LGWDVSSDMWSFGCVLAELYTGSL 257 (360)
T ss_dssp CCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeccCceecCCC-----CcCccCcccccCcHHH------cC---------CCCCCccchHHHHHHHHHHHHCCC
Confidence 4567888 556554433 3468999999999999 44 56889999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||....
T Consensus 258 pf~~~~ 263 (360)
T 3llt_A 258 LFRTHE 263 (360)
T ss_dssp SCCCSS
T ss_pred CCCCCc
Confidence 997643
No 294
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.34 E-value=1.7e-13 Score=131.13 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=70.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++....... .....||+.|||||++ . +.++.++|||||||+||||++|.
T Consensus 193 ~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~el~~g~~ 253 (311)
T 3p1a_A 193 RGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELL------Q----------GSYGTAADVFSLGLTILEVACNME 253 (311)
T ss_dssp GGCEEECCCTTCEECC---------CCCCCGGGCCGGGG------G----------TCCSTHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEccceeeeecccCCC---CcccCCCccccCHhHh------c----------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3468898 56666554332 4457899999999988 2 35788999999999999999997
Q ss_pred ccch-hhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTK-ELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.. .....+. ....+.... ......+.+++.+||+.+|.+||++.++.+
T Consensus 254 ~~~~~~~~~~~~------------~~~~~~~~~-----------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 254 LPHGGEGWQQLR------------QGYLPPEFT-----------AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCSSHHHHHHHT------------TTCCCHHHH-----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCccHHHHHh------------ccCCCcccc-----------cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 4443 3222111 000001000 112234788999999999999999887654
No 295
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.34 E-value=2.2e-13 Score=139.32 Aligned_cols=108 Identities=15% Similarity=0.218 Sum_probs=72.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+|+.+..... .+..+||+.|||||++ .+ ..++.++|||||||+||||++|+ |
T Consensus 323 g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl------~~---------~~~~~~~DiwSLGvilyeLltG~~P 384 (576)
T 2acx_A 323 GHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVV------KN---------ERYTFSPDWWALGCLLYEMIAGQSP 384 (576)
T ss_dssp SCEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHH------TT---------CEESSHHHHHHHHHHHHHHHHSSCS
T ss_pred CCeEEEecccceecccCcc---ccccCCCccccCHHHH------cC---------CCCCccchHHHHHHHHHHHHhCCCC
Confidence 567888 67777665432 4567999999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|........ . ......+...+..........+.+++.+||..+|.+||.
T Consensus 385 F~~~~~~~~-------------~----~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g 433 (576)
T 2acx_A 385 FQQRKKKIK-------------R----EEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433 (576)
T ss_dssp SSCSSSCCC-------------H----HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred Ccccccchh-------------H----HHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCC
Confidence 987532200 0 000010111100000112234788999999999999994
No 296
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.34 E-value=5.2e-13 Score=126.23 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=45.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... ..+...||+.|||||++ .+ ...+++++|||||||++|+|++|+ |
T Consensus 137 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~p 200 (288)
T 1ob3_A 137 GELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVL------MG--------SKKYSTTIDIWSVGCIFAEMVNGTPL 200 (288)
T ss_dssp SCEEECCTTHHHHHCC-----------CCCTTCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeECccccccCcccc--ccccccccccccCchhe------eC--------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 467888 55555543221 14467899999999998 33 235789999999999999999999 9
Q ss_pred cchhh
Q 009274 89 FTKEL 93 (538)
Q Consensus 89 f~~~~ 93 (538)
|.+..
T Consensus 201 f~~~~ 205 (288)
T 1ob3_A 201 FPGVS 205 (288)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 98643
No 297
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.34 E-value=5.6e-14 Score=138.07 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=75.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+|+...... ....||+.|||||++ .+ ....+++++|||||||+||+|+||+ |
T Consensus 231 ~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~------~~-------~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 231 GRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFL------NA-------STATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp SCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHH------TC-------SEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEecceeeecCCCc-----cCccCCcCCcChhhc------cC-------CCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 468998 6677665442 246777999999999 32 1256789999999999999999999 9
Q ss_pred cchhhhhheee---ccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRC---VSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......... ........ .....+ ........+.+++.+||..+|.+||++.++.+
T Consensus 293 f~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRVPGT---DSLAFG------------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTSCCC---CSCCCT------------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchhhhhhhhccc---cccchh------------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 98864431110 00000000 000000 00111223778999999999999999877654
No 298
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.34 E-value=1.6e-13 Score=132.29 Aligned_cols=131 Identities=17% Similarity=0.105 Sum_probs=78.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+++....... .......||+.|||||++ .+ ..+++++|||||||++|+|+||+ |
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 234 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYL------ST---------GKSSEKTDVFGYGVMLLELITGQRA 234 (326)
T ss_dssp CCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHH------HH---------SEECHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCEEeccCccccccCcccc-cccccccCCcCccCHHHh------cc---------CCCCccccchhHHHHHHHHHhCCCc
Confidence 357888 56666553332 224457799999999998 22 45778999999999999999999 9
Q ss_pred cchhhhhhee------eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 89 FTKELIDYIR------CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 89 f~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
|.......-. ..........+.............+..+ ..+.+++.+||..+|.+||++.++.+.+
T Consensus 235 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 235 FDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV--------EQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp BCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH--------HHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred ccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH--------HHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 9743211000 0000000000000000000000001111 1277899999999999999999999887
Q ss_pred HHhh
Q 009274 163 RELI 166 (538)
Q Consensus 163 ~~l~ 166 (538)
....
T Consensus 307 ~~~~ 310 (326)
T 3uim_A 307 EGDG 310 (326)
T ss_dssp HTSS
T ss_pred cCcc
Confidence 7643
No 299
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.34 E-value=8.2e-13 Score=130.82 Aligned_cols=136 Identities=12% Similarity=0.154 Sum_probs=82.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++...+... .....||+.|||||++....... .....++.++|||||||++|+|+||+
T Consensus 152 ~~~~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~-------~~~~~~~~~~DiwSlG~il~el~tg~~ 221 (396)
T 4eut_A 152 QSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRK-------DHQKKYGATVDLWSIGVTFYHAATGSL 221 (396)
T ss_dssp CEEEEECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ceeEEEecCCCceEccCCCc---cccccCCccccCHHHhhcccccc-------ccccCCCcHHHHHHHHHHHHHHHHCCC
Confidence 4568898 66776665432 45688999999999984321110 00145678999999999999999999
Q ss_pred ccchhhhh-----heeec-ccccc---------Ccchhhcc-h---hhHHHHHHHHHHHhhhcCccchHHHHHhhhhccC
Q 009274 88 QFTKELID-----YIRCV-STKAS---------DDNIACLG-M---YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFD 148 (538)
Q Consensus 88 pf~~~~~~-----~~~~~-~~~~~---------~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 148 (538)
||...... .+..+ ..+.. ......+. . ........+. .+.+++.+||..+
T Consensus 222 Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~l~~ll~~~L~~d 290 (396)
T 4eut_A 222 PFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV-----------LLTPVLANILEAD 290 (396)
T ss_dssp SEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH-----------HHHHHHHHHSCCC
T ss_pred CCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHh-----------hchHHHHHhhccC
Confidence 99753211 00000 00000 00000000 0 0000011111 2677999999999
Q ss_pred CCCCcchhhHHHHHHHhhc
Q 009274 149 PGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 149 p~~r~~~~~~~~~l~~l~~ 167 (538)
|.+||++.++.+.+..++.
T Consensus 291 P~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 291 QEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp TTTSCCHHHHHHHHHHHHT
T ss_pred hhhhccHHHHHHHHHHHhh
Confidence 9999999999888887763
No 300
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.34 E-value=3.7e-13 Score=125.92 Aligned_cols=117 Identities=16% Similarity=0.188 Sum_probs=80.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+++........ ......||+.|||||++ .+ ..+++++||||||+++|+|++ |+
T Consensus 143 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~ll~~g~~ 206 (269)
T 4hcu_A 143 QVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVF------SF---------SRYSSKSDVWSFGVLMWEVFSEGKI 206 (269)
T ss_dssp GCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEeccccccccccccccc-cccCcccccccCCHHHh------cC---------CCCCchhhhHHHHHHHHHHhcCCCC
Confidence 457888 556655544322 24457788999999998 22 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+. ....... ......+.+++.+||..+|.+||++.++.+.+.++
T Consensus 207 p~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 207 PYENRSNSEVVEDIS----------------------TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp TTTTCCHHHHHHHHH----------------------TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHh----------------------cCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 99875444111 000 0000000 01122377899999999999999999999988876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 265 ~ 265 (269)
T 4hcu_A 265 A 265 (269)
T ss_dssp H
T ss_pred H
Confidence 5
No 301
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.34 E-value=3.3e-13 Score=142.29 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=74.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+........ ..+++||+.|||||++ .+ ..++.++|+|||||+||||++|+
T Consensus 478 ~g~ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l------~~---------~~~~~~~DvwSlGvilyelltG~~ 540 (674)
T 3pfq_A 478 EGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEII------AY---------QPYGKSVDWWAFGVLLYEMLAGQA 540 (674)
T ss_dssp SSCEEECCCTTCEECCCTTCC--BCCCCSCSSSCCHHHH------TC---------CCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeecceeeccccCCcc--cccccCCCcccCHhhh------cC---------CCCCccceEechHHHHHHHHcCCC
Confidence 3567888 667654333222 5679999999999999 44 67889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
||.+.+...+........ ...+ ......+.+++.+||.++|.+|+.+
T Consensus 541 Pf~~~~~~~~~~~i~~~~------~~~p---------------~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 541 PFEGEDEDELFQSIMEHN------VAYP---------------KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp SSCCSSHHHHHHHHHSSC------CCCC---------------TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred CCCCCCHHHHHHHHHhCC------CCCC---------------ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 998865542220000000 0000 0111237789999999999999987
No 302
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.34 E-value=2.2e-13 Score=128.53 Aligned_cols=112 Identities=19% Similarity=0.222 Sum_probs=71.7
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+..... .....||+.|+|||++ .+ ..+++++||||||+++|+|++|. ||
T Consensus 150 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p~ 211 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIV------NY---------EPLGLEADMWSIGVITYILLSGASPF 211 (283)
T ss_dssp CEEECCCTTCEECC-----------CCCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ceEEEecccceeccCCCc---ccccCCCcCccCccee------cC---------CCCCcchhhhhHHHHHHHHHHCCCCC
Confidence 57888 45565554322 4567899999999998 43 56788999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
......... .+. .. ......... ......+.+++.+||..+|.+||++.++.+
T Consensus 212 ~~~~~~~~~~~~~---------~~-~~~~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 212 LGETKQETLTNIS---------AV-NYDFDEEYF--------SNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCSSHHHHHHHHH---------TT-CCCCCHHHH--------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcchHHHHHHhH---------hc-ccCCcchhc--------ccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 875443111 000 00 000000000 112223778999999999999999888765
No 303
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.34 E-value=9.5e-14 Score=132.40 Aligned_cols=134 Identities=10% Similarity=0.129 Sum_probs=70.2
Q ss_pred eeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc-
Q 009274 12 SVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG- 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg- 86 (538)
+.+|+. |+++......... ......||+.|||||++ .+. .......+++++|||||||+||||+||
T Consensus 145 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~---~~~~~~~~~~~~DiwslG~il~el~~g~ 215 (303)
T 3gxj_A 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------DDS---INMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp CCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHH------TTC---SCTTCHHHHHHHHHHC-CCCC-CTGGGB
T ss_pred CCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhh------cCc---ccccccccCcchhHHHHHHHHHHHHhcC
Confidence 467888 5665555443211 12345899999999999 330 000012556789999999999999999
Q ss_pred ---------C-ccchhhhhhee--e-ccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCc
Q 009274 87 ---------E-QFTKELIDYIR--C-VSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (538)
Q Consensus 87 ---------~-pf~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~ 153 (538)
+ ||......... . ........ . ....+..+. ....+ ..+.+++.+||+.+|.+||
T Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~--~~~~~--------~~l~~li~~cl~~dP~~Rp 283 (303)
T 3gxj_A 216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK-L-RPNIPNRWQ--SCEAL--------RVMAKIMRECWYANGAARL 283 (303)
T ss_dssp CBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSC-C-CCCCCGGGG--SSHHH--------HHHHHHHHTTCCSSGGGSC
T ss_pred CCccccceeeccccccCCCCccHHHHHHHHHHhh-c-CCCcccccc--chhhH--------HHHHHHHHHHhccCcccCC
Confidence 5 66543221000 0 00000000 0 000000000 00111 1277899999999999999
Q ss_pred chhhHHHHHHHhh
Q 009274 154 LLTNVWKCIRELI 166 (538)
Q Consensus 154 ~~~~~~~~l~~l~ 166 (538)
++.++.+.+.++.
T Consensus 284 s~~~i~~~L~~l~ 296 (303)
T 3gxj_A 284 TALRIKKTLSQLS 296 (303)
T ss_dssp CHHHHHHHHHC-C
T ss_pred CHHHHHHHHHHhh
Confidence 9999999888765
No 304
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.33 E-value=4.7e-13 Score=128.37 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=76.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++........ ....+||+.|||||++ .+ ...+++++|||||||++|+|++|+ |
T Consensus 145 ~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~p 208 (317)
T 2pmi_A 145 GQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVL------MG--------SRTYSTSIDIWSCGCILAEMITGKPL 208 (317)
T ss_dssp CCEEECCCSSCEETTSCCCC--CCCCCSCCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEECcCccceecCCCccc--CCCCcccccccCchHh------hC--------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 457888 566665433222 4568999999999998 33 235788999999999999999999 9
Q ss_pred cchhhhhhee-ec----cccccC--cchh--------h-cchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCC
Q 009274 89 FTKELIDYIR-CV----STKASD--DNIA--------C-LGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGC 151 (538)
Q Consensus 89 f~~~~~~~~~-~~----~~~~~~--~~~~--------~-~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~ 151 (538)
|.+....... .+ ...... .... . ......+. ........ .....+.+++.+||..+|.+
T Consensus 209 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 284 (317)
T 2pmi_A 209 FPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLR----QVLQPHTKEPLDGNLMDFLHGLLQLNPDM 284 (317)
T ss_dssp CCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSH----HHHGGGCSSCCCHHHHHHHHHHSCSSGGG
T ss_pred CCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHH----HhhcccccccCCHHHHHHHHHHCCCCccc
Confidence 9875433111 00 000000 0000 0 00000000 01111111 12234888999999999999
Q ss_pred CcchhhHHH
Q 009274 152 RPLLTNVWK 160 (538)
Q Consensus 152 r~~~~~~~~ 160 (538)
||++.++.+
T Consensus 285 Rpt~~e~l~ 293 (317)
T 2pmi_A 285 RLSAKQALH 293 (317)
T ss_dssp SCCHHHHTT
T ss_pred CCCHHHHhC
Confidence 999877654
No 305
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.33 E-value=2.8e-13 Score=132.83 Aligned_cols=111 Identities=9% Similarity=0.141 Sum_probs=71.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+|+.+..... .++++||+.|||||++ .+ .....++.++|||||||+||+|++|+ |
T Consensus 152 g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~------~~------~~~~~~~~~~DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 152 GHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMF------SS------RKGAGYSFAVDWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp SCEEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGT------CC------CSSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeccceeeeccCCCc---eeccCCCccccCCeee------cc------CCCCCCCccceeechHHHHHHHHhCCCC
Confidence 467888 66776654432 5579999999999998 32 01245788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|........ .... .................+.+++.+||..+|.+||+.
T Consensus 217 f~~~~~~~~--------------~~~~----~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~ 265 (384)
T 4fr4_A 217 YHIRSSTSS--------------KEIV----HTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQ 265 (384)
T ss_dssp SCCCTTSCH--------------HHHH----HHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCS
T ss_pred CCCCCCccH--------------HHHH----HHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhccc
Confidence 975422200 0000 000000000001112347889999999999999984
No 306
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.33 E-value=4.2e-13 Score=129.28 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=67.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~p 220 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEIL------MR---------SGHNRAVDWWSLGALMYDMLTGAPP 220 (327)
T ss_dssp SCEEECCCSCC------------CTTSSCCTTSCHHHH------TT---------SCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEEeCCcccccccCCc--cccccCCCcCccCHhhC------cC---------CCCCCcccchhHHHHHHHHHHCCCC
Confidence 467888 55555433322 24568999999999999 43 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcch
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~ 155 (538)
|.+.....+. ..+..............+.+++.+||..+|.+||+.
T Consensus 221 f~~~~~~~~~---------------------~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 221 FTGENRKKTI---------------------DKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA 266 (327)
T ss_dssp CCCSSHHHHH---------------------HHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTS
T ss_pred CCCCCHHHHH---------------------HHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCC
Confidence 9875444111 000000000001112247789999999999999964
No 307
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.33 E-value=6.3e-13 Score=131.90 Aligned_cols=60 Identities=22% Similarity=0.429 Sum_probs=49.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+|+..... .+..+||+.|||||++ .+ ..++.++|||||||+||+|+||+ ||
T Consensus 234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~pf 293 (397)
T 1wak_A 234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL------IG---------SGYNTPADIWSTACMAFELATGDYLF 293 (397)
T ss_dssp CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH------HT---------SCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ceEecccccccccccc-----CccCCCCCcccCChhh------cC---------CCCCcHHHHHHHHHHHHHHhhCCCCC
Confidence 67888 566665543 4467999999999999 44 45789999999999999999999 99
Q ss_pred chh
Q 009274 90 TKE 92 (538)
Q Consensus 90 ~~~ 92 (538)
.+.
T Consensus 294 ~~~ 296 (397)
T 1wak_A 294 EPH 296 (397)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 308
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.33 E-value=3.6e-13 Score=134.68 Aligned_cols=62 Identities=27% Similarity=0.440 Sum_probs=49.6
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~ 90 (538)
.|+. |+|+..... ..+.+||+.|||||++ .+ ..++.++|||||||+||+|+||+ ||.
T Consensus 241 vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVI------LG---------ARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp EEECCCTTCEETTCC-----CCSSCSCGGGCCHHHH------HT---------BCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEeecccceecCCc-----ccccCCCCCccChHHH------hC---------CCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 6888 556554433 3468999999999999 44 56789999999999999999999 998
Q ss_pred hhhhh
Q 009274 91 KELID 95 (538)
Q Consensus 91 ~~~~~ 95 (538)
+....
T Consensus 301 ~~~~~ 305 (429)
T 3kvw_A 301 GEDEG 305 (429)
T ss_dssp CSSHH
T ss_pred CCCHH
Confidence 75433
No 309
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.33 E-value=1.1e-13 Score=141.00 Aligned_cols=113 Identities=19% Similarity=0.221 Sum_probs=76.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+....... ....+||+.|||||++ . +.+++++|||||||++|+|++|+
T Consensus 165 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~~ll~g~~ 225 (484)
T 3nyv_A 165 DANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVL------H----------GTYDEKCDVWSTGVILYILLSGCP 225 (484)
T ss_dssp TCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHH------H----------TCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeeeeeEEcccccc---cccCCCCccccCceee------c----------CCCCCcceeHHHHHHHHHHHHCCC
Confidence 3457888 56666654432 5568899999999998 3 35788999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+. .+. +.. .....+.+ ......+.+++.+||..+|.+||++.++.+
T Consensus 226 pf~~~~~~~~~~~i~-~~~-----~~~~~~~~------------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 226 PFNGANEYDILKKVE-KGK-----YTFELPQW------------KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SSCCSSHHHHHHHHH-HCC-----CCCCSGGG------------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCHHHHHHHHH-cCC-----CCCCCccc------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 99876544222 000 000 00000111 111223778999999999999999987765
No 310
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.33 E-value=1.8e-13 Score=139.46 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+|+....... ....+||+.|||||++ . +.+++++|||||||+||+|++|+ |
T Consensus 161 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~~ll~g~~p 221 (486)
T 3mwu_A 161 CDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVL------R----------GTYDEKCDVWSAGVILYILLSGTPP 221 (486)
T ss_dssp CCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGG------G----------SCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHh------C----------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 66666654432 5568999999999998 3 35788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+.....+. .+... . .....+.+ ......+.+++.+||..+|.+||++.++.+
T Consensus 222 f~~~~~~~~~~~i~~~-~-----~~~~~~~~------------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 222 FYGKNEYDILKRVETG-K-----YAFDLPQW------------RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp SCCSSHHHHHHHHHHT-C-----CCSCSGGG------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHhC-C-----CCCCCccc------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 9876444221 00000 0 00000111 111223778999999999999999988776
No 311
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.33 E-value=3.3e-13 Score=126.72 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=63.1
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
-+|+. |+++...+... .....||+.|||||++ .+ ....++++|||||||++|+|++|+ ||
T Consensus 150 ~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~pf 212 (275)
T 2eue_A 150 NVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVI------SG--------KLYAGPEVDVWSCGVILYVMLCRRLPF 212 (275)
T ss_dssp CEEECCSSCC------------------CTTCCHHHH------CC-------------THHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEeecccceeccCccc---ccCCCCCcCcCCceee------eC--------CCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 47888 55565554432 4567899999999999 33 122368999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.......+. .................+.+++.+||+.+|.+||++.++.+
T Consensus 213 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 213 DDESIPVLF---------------------KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCSSHHHHH---------------------HHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHH---------------------HHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 875444111 00000000000111224778999999999999999887754
No 312
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.33 E-value=2.5e-13 Score=129.79 Aligned_cols=123 Identities=12% Similarity=0.192 Sum_probs=71.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++........ ......||+.|+|||++ .+ ..+++++||||||+++|+|++|+ |
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 234 (309)
T 2h34_A 171 DFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERF------SE---------SHATYRADIYALTCVLYECLTGSPP 234 (309)
T ss_dssp SCEEECSCCC-----------------CCGGGCCGGGT------CC-------------CCCHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEecCccCccccccccc-cccccCCCcCccCHHHH------cC---------CCCCchHhHHHHHHHHHHHHHCCCC
Confidence 457888 455555543221 23467899999999998 43 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCc-chhhHHHHHHHhhc
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP-LLTNVWKCIRELII 167 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~-~~~~~~~~l~~l~~ 167 (538)
|.......+... ....... +..........+.+++.+||..+|.+|| ++.++.+.+.+.+.
T Consensus 235 f~~~~~~~~~~~----------~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 235 YQGDQLSVMGAH----------INQAIPR--------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp SCSCHHHHHHHH----------HHSCCCC--------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCCchHHHHHHH----------hccCCCC--------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 987644311100 0000000 0000111223478899999999999999 67888888887664
Q ss_pred C
Q 009274 168 K 168 (538)
Q Consensus 168 ~ 168 (538)
.
T Consensus 297 ~ 297 (309)
T 2h34_A 297 T 297 (309)
T ss_dssp -
T ss_pred h
Confidence 3
No 313
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.33 E-value=3.7e-13 Score=130.80 Aligned_cols=119 Identities=15% Similarity=0.163 Sum_probs=79.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++.+.............||+.|||||++ .+ ..+++++|||||||++|+|+| |.
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI------FY---------NRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CeEEEeecCCCcccccCccccccCCCcccceecChhhh------cc---------CCcCcccccHHHHHHHHHHHhcCCC
Confidence 467888 556665544322224467899999999998 22 457789999999999999999 99
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+. .+.. .. ... ........+.+++.+||+.+|.+||+..++.+.+.++.
T Consensus 276 p~~~~~~~~~~~~~~~-~~-----~~~---------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 276 PYYGMAHEEVIYYVRD-GN-----ILA---------------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTTTSCHHHHHHHHHT-TC-----CCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cCCCCChHHHHHHHhC-CC-----cCC---------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 99875443111 0000 00 000 00111224788999999999999999999999888875
No 314
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.33 E-value=1.8e-13 Score=130.29 Aligned_cols=130 Identities=14% Similarity=0.184 Sum_probs=76.4
Q ss_pred eeeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 11 KSVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
+..+|+. |+|+......... ......||+.|||||++ .+. .......+++++|||||||++|||+||
T Consensus 149 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~---~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 149 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL------DET---IQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHH------TTC---CCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeCCCeeecccccccccccccccccccceeChhhh------cCc---CCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 3468888 5665544332211 12245899999999999 330 000001456799999999999999999
Q ss_pred ----------C-ccchhhhhhee-----e-ccccccCcchhhcchhhH-HHHHHHHHHHhhhcCccchHHHHHhhhhccC
Q 009274 87 ----------E-QFTKELIDYIR-----C-VSTKASDDNIACLGMYMA-WMEKVTYLLENKFGSEFVSLQLMFCQCLNFD 148 (538)
Q Consensus 87 ----------~-pf~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 148 (538)
+ ||......... . ...... ....+.. ..... + ..+.+++.+||+.+
T Consensus 220 ~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~--------~~l~~li~~cl~~d 283 (301)
T 3q4u_A 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ-----RPNIPNRWFSDPT---L--------TSLAKLMKECWYQN 283 (301)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC-----CCCCCGGGGGSHH---H--------HHHHHHHHHHCCSS
T ss_pred hcCccccccccccccccCCCCcchhhhhHHHhccCC-----CCCCChhhccCcc---H--------HHHHHHHHHHhhcC
Confidence 6 77553222000 0 000000 0000000 00001 1 13778999999999
Q ss_pred CCCCcchhhHHHHHHHh
Q 009274 149 PGCRPLLTNVWKCIREL 165 (538)
Q Consensus 149 p~~r~~~~~~~~~l~~l 165 (538)
|.+||++.++.+.+.++
T Consensus 284 P~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 284 PSARLTALRIKKTLTKI 300 (301)
T ss_dssp GGGSCCHHHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHhcc
Confidence 99999999998877653
No 315
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.32 E-value=6.8e-13 Score=132.36 Aligned_cols=122 Identities=20% Similarity=0.249 Sum_probs=76.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
.+.|+. |+++.+...+. ....+||+.|||||++ .| ...++.++|||||||+||||++|+ |
T Consensus 194 ~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 194 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI------FG--------ATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp TEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHH------cC--------CCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 457898 67776654432 3468999999999999 33 235788999999999999999999 9
Q ss_pred cchhhhhh-eeeccccccCcchhhcchhhHHHHHHHHHHHh-----------------hhcCccchHHHHHhhhhccCCC
Q 009274 89 FTKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-----------------KFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 89 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
|.+..... +..+. + ....+ ..+.+...... ........+.+++.+||..+|.
T Consensus 257 f~~~~~~~~l~~i~-~-------~lg~p--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~ 326 (420)
T 1j1b_A 257 FPGDSGVDQLVEII-K-------VLGTP--TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 326 (420)
T ss_dssp SCCSSHHHHHHHHH-H-------HHCSC--CHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred CCCCCHHHHHHHHH-H-------HhCCC--CHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChh
Confidence 98754321 11000 0 00000 00001000000 0011123478899999999999
Q ss_pred CCcchhhHHH
Q 009274 151 CRPLLTNVWK 160 (538)
Q Consensus 151 ~r~~~~~~~~ 160 (538)
+||++.++.+
T Consensus 327 ~R~t~~e~l~ 336 (420)
T 1j1b_A 327 ARLTPLEACA 336 (420)
T ss_dssp GSCCHHHHHT
T ss_pred HCCCHHHHhC
Confidence 9999887654
No 316
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.32 E-value=3.1e-13 Score=127.62 Aligned_cols=112 Identities=20% Similarity=0.283 Sum_probs=69.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... .....||+.|||||++ . ..+++++|||||||++|+|++|+
T Consensus 163 ~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~------~----------~~~~~~~Di~slG~il~~ll~g~~ 223 (285)
T 3is5_A 163 HSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVF------K----------RDVTFKCDIWSAGVVMYFLLTGCL 223 (285)
T ss_dssp TCCEEECCCCCCCC-------------CTTGGGCCHHHH------T----------TCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeeecceecCCccc---CcCcccccCcCChHHh------c----------cCCCcccCeehHHHHHHHHHhCCC
Confidence 3557888 56666554432 4568899999999998 2 34678999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.+.....+. ........ .. .........+.+++.+||..+|.+||++.++.+
T Consensus 224 pf~~~~~~~~~~~~~~~~~~----~~---------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 224 PFTGTSLEEVQQKATYKEPN----YA---------------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp SSCCSSHHHHHHHHHHCCCC----CC---------------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CCCCCCHHHHHhhhccCCcc----cc---------------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99875443111 00000000 00 000011223778999999999999999888654
No 317
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.32 E-value=4.4e-13 Score=130.86 Aligned_cols=63 Identities=19% Similarity=0.361 Sum_probs=50.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++..... .....||+.|||||++ .+ ..++.++|||||||+||+|++|+
T Consensus 178 ~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~ 237 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVI------LE---------LGWAQPCDVWSIGCILFEYYRGFT 237 (355)
T ss_dssp CCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeecCcccccccc-----ccCCcCCCcccCCeee------ec---------CCCCCccchHHHHHHHHHHHhCCC
Confidence 5668888 556654433 3468999999999999 44 56789999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||....
T Consensus 238 pf~~~~ 243 (355)
T 2eu9_A 238 LFQTHE 243 (355)
T ss_dssp SCCCSS
T ss_pred CCCCCC
Confidence 998643
No 318
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.32 E-value=3.5e-13 Score=130.41 Aligned_cols=119 Identities=14% Similarity=0.190 Sum_probs=80.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...............||+.|||||++ .+ ..++.++|||||||+||+|++ |+
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~ 258 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL------FD---------RVYTHQSDVWSFGVLMWEIFTLGGS 258 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHh------cC---------CCcChHHHHHHHHHHHHHHHhCCCC
Confidence 457888 566665544322223456789999999998 22 457789999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. ..+........ ......+.+++.+||..+|.+||++.++.+.+.++.
T Consensus 259 p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 259 PYPGIPVEELF---------------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp SSTTCCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCcCCHHHHH---------------------HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99875433111 00000000000 112234788999999999999999999999888875
No 319
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=2e-09 Score=115.21 Aligned_cols=233 Identities=7% Similarity=-0.041 Sum_probs=146.6
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCC----cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc---
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGG----GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~--- 363 (538)
|...+..++|+|++..++++.+.+| .|++||+.+++........ ......+|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~------~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER------VKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE------ECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC------cccceEEEEeCCCEEEEEEECCcccc
Confidence 4456889999998776655555444 8999999876543211110 11124589999999998888766
Q ss_pred -------------EEEEECCCCce----eEEecCCCCCeEEEEEe--CCEEEEEec-----CCcEEEEECCC------Cc
Q 009274 364 -------------IKAWSLLDGTL----SCTMSGHKSAVSTLAVC--NGVLYSGSR-----DGTIRLWSLSD------HS 413 (538)
Q Consensus 364 -------------i~iwd~~~~~~----~~~~~~h~~~v~~l~~~--~~~l~s~s~-----dg~i~iwd~~~------~~ 413 (538)
|++|++.+++. +.....|...+.++.|+ +++|+.++. +..|++||+.+ +.
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 99999988763 22223355668899999 456766654 57899999986 43
Q ss_pred -eeEEEecCCCCceEEEEEEcCCCCEEEEEeCC----CcEEEEeCCcc----eeeeccccc--eEEEEEe--CCCEEEEE
Q 009274 414 -LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDKF----MKSMQTHKG--SVFAVFL--EGKWLFTG 480 (538)
Q Consensus 414 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~----~~~~~~h~~--~v~~~~~--~~~~l~sg 480 (538)
....+..+.... . ..++++|+.|+..+.. +.|.+||.... ...+..|.. .+..+.+ ++.++++.
T Consensus 277 ~~~~~l~~~~~~~-~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 277 LKWVKLIDNFEGE-Y--DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CCCEEEECSSSSC-E--EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred cceEEeeCCCCcE-E--EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 345555443332 2 2577888888776653 35899996543 245555544 5666766 55677788
Q ss_pred eCCCe--EEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEE-EEE---CCCeEEEEEcC
Q 009274 481 GWDKT--VSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLF-VGC---ADRTVKVYYYG 537 (538)
Q Consensus 481 s~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~-sg~---~dg~v~vw~~~ 537 (538)
..|+. |++||+.+++........ ...+..+.+ +++ .++ +.+ ..+.|++||+.
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~~-----~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPLE-----VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECCC-----SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred EECCEEEEEEEECCCCCEEEecCCC-----CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 88885 566777555533322211 223333433 344 444 333 35789999874
No 320
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.32 E-value=1.2e-13 Score=133.07 Aligned_cols=121 Identities=13% Similarity=0.117 Sum_probs=56.6
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++........ ....+||+.|||||++ .+ ..+++++|||||||++|+|++|+ ||
T Consensus 147 ~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~pf 209 (325)
T 3kn6_A 147 EIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPELL------NQ---------NGYDESCDLWSLGVILYTMLSGQVPF 209 (325)
T ss_dssp EEEECCCTTCEECCC---------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEeccccceecCCCCCc--ccccCCCcCccCHHHh------cC---------CCCCCccchHHHHHHHHHHHhCCCCC
Confidence 57888 566655544332 5678999999999998 33 55788999999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
......... . . ...............+..........+.+++.+||..+|.+||++.++.+
T Consensus 210 ~~~~~~~~~------~-~---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 210 QSHDRSLTC------T-S---AVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp C-------C------C-C---HHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCcccccc------c-c---HHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 875432100 0 0 00000000000000000000011224778999999999999999888754
No 321
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.32 E-value=3.7e-08 Score=92.92 Aligned_cols=278 Identities=11% Similarity=0.007 Sum_probs=171.7
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEE-EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT-FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
-+.+......+.+++++ ++..++...++.|.+||.. ++.... +..+...+.++++.+++ .++++...++.|..||
T Consensus 12 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 12 EFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLS 89 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEEC
Confidence 34455566788999998 6666666678999999987 554432 22334678899987754 5667666678899998
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeE-EecCCCCCeEEEEEe--CCEEEEE
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC-TMSGHKSAVSTLAVC--NGVLYSG 398 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~--~~~l~s~ 398 (538)
.. +.. ..+...........+++.+++++.++...++.|..||.. ++... .+......+.+++++ +++.++.
T Consensus 90 ~~-g~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 90 KK-GGF----TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp TT-SCE----EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CC-CCe----EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 76 321 111111111122244666778877777668899999987 55442 233345678899997 3455555
Q ss_pred ecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeee--ccccceEEEEEe--CC
Q 009274 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL--EG 474 (538)
Q Consensus 399 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~h~~~v~~~~~--~~ 474 (538)
..++.|..+|. +++... +...........+++.+++++.++....+.|..||.......+ ..+...+.++.. +|
T Consensus 164 ~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp TTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTT
T ss_pred cCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCC
Confidence 55788999998 555443 3322222223346888999877776677789999964333322 233455667766 67
Q ss_pred CEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 475 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
++.++...++.|..||.. +.......... ...+......+++.++.++.. .|..++..
T Consensus 242 ~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 242 EIWFTEWGANQIGRITND-NTIQEYQLQTE---NAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECCST---TCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred CEEEeccCCCeEEEECCC-CcEEEEECCcc---CCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 766666567999999984 44332211111 122223333457778777764 67766653
No 322
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.32 E-value=1.7e-13 Score=136.68 Aligned_cols=118 Identities=16% Similarity=0.178 Sum_probs=68.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
..+|+. |+|+.+.... ..+..+||+.|||||++ .+ .....++.++|||||||+||+|++|+ |
T Consensus 279 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~------~~~~~~~~~~DiwslG~il~~lltg~~p 343 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVL------VS------VGTAGYNRAVDCWSLGVILFICLSGYPP 343 (419)
T ss_dssp CCEEECCSSTTTSCC--------------CTTCCTTTT------C----------CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ceEEEeecccceecCCCc---cccccCCCCCccCceee------ec------CCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 358888 6677765443 25678999999999998 21 01245778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|............. .........+.. ......+.+++.+||..+|.+||++.++.+
T Consensus 344 f~~~~~~~~~~~~i--------~~~~~~~~~~~~--------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 344 FSEHRTQVSLKDQI--------TSGKYNFIPEVW--------AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCCCSSSCCHHHHH--------HTTCCCCCHHHH--------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCcchHHHHHHH--------hcCCCCCCchhh--------cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 97643221000000 000000000100 112223778999999999999999887665
No 323
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.32 E-value=5.1e-13 Score=134.64 Aligned_cols=111 Identities=23% Similarity=0.332 Sum_probs=75.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++...+.. ...+.+||+.|+|||++ .| ....++++|||||||+||+|++|+ |
T Consensus 153 ~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlGvil~elltG~~P 215 (476)
T 2y94_A 153 MNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVI------SG--------RLYAGPEVDIWSSGVILYALLCGTLP 215 (476)
T ss_dssp CCEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHH------TT--------CCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCeEEEeccchhhccccc---cccccCCCcCeEChhhc------cC--------CCCCCCcceehhhHHHHHHHhhCCCC
Confidence 457888 6677665543 25578999999999999 44 122368999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. ..+..............+.+++.+||..+|.+||++.++.+
T Consensus 216 f~~~~~~~~~---------------------~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 216 FDDDHVPTLF---------------------KKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp SCCSSSHHHH---------------------HHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHH---------------------HHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 9875433111 00000000000011224778999999999999999988775
No 324
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.32 E-value=4.8e-13 Score=126.04 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=71.5
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+. |+++........ ......||+.|||||++ .+ ..+++++|||||||++|+|++ |.
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~ell~~g~ 215 (281)
T 1mp8_A 152 NDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESI------NF---------RRFTSASDVWMFGVCMWEILMHGV 215 (281)
T ss_dssp TTEEEECC--------------------CCGGGCCHHHH------HH---------CCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECccccccccCccccc-ccccCCCcccccChhhc------cc---------CCCCCccCchHHHHHHHHHHhcCC
Confidence 3467888 566666544321 13356789999999998 22 457789999999999999997 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. .... .........+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 216 ~pf~~~~~~~~~~~i~~---------~~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 216 KPFQGVKNNDVIGRIEN---------GERL------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp CTTTTCCGGGHHHHHHT---------TCCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHc---------CCCC------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99875333111 0000 0000 00011223478899999999999999999999988876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 275 ~ 275 (281)
T 1mp8_A 275 L 275 (281)
T ss_dssp H
T ss_pred H
Confidence 5
No 325
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.32 E-value=9.6e-13 Score=124.10 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=78.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....||+.|||||++ .+ ..+++++||||||+++|+|++|. |
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~~~~ 220 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQI------SS---------QDYGKEVDLYALGLILAELLHVCDT 220 (284)
T ss_dssp TEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHH------HC---------SCCCTHHHHHHHHHHHHHHHSCCSS
T ss_pred CCEEECcchhheecccccc---ccccCCcccccChhhh------cc---------CCCcchhhhHHHHHHHHHHHhcCCc
Confidence 457888 55566554432 3467899999999998 33 45788999999999999999999 8
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcC-ccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
|....... . ......... ....+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 221 ~~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 221 AFETSKFF-T-------------------------DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHHHHH-H-------------------------HHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred chhHHHHH-H-------------------------HhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 76432210 0 000000011 1123778999999999999999999998887765
No 326
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.32 E-value=8.1e-14 Score=137.23 Aligned_cols=114 Identities=10% Similarity=0.006 Sum_probs=71.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+|+..... .+..+| +.|||||++...... .........+++++|||||||+||+|++|+ |
T Consensus 243 ~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~----~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 243 GGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATI----SYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp CCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTST----HHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccc----cccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 568999 667765543 446889 999999999333000 000001236789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|........... .... .......+.+++.+||..+|.+||++.++.+
T Consensus 313 f~~~~~~~~~~~----------~~~~---------------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAALGGSEW----------IFRS---------------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------CCSGG----------GGSS---------------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Ccccccccchhh----------hhhh---------------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 987654421100 0000 0111223778999999999999999887664
No 327
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.32 E-value=6.1e-13 Score=132.65 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=76.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+|+.+..... ...+..+||+.|||||++..... ....++.++|||||||+||||++|+
T Consensus 211 ~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~----------~~~~~~~~~DvwSlGvil~elltG~~ 279 (437)
T 4aw2_A 211 NGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEG----------GKGRYGPECDWWSLGVCMYEMLYGET 279 (437)
T ss_dssp TSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHT----------SCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhccc----------CCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence 4568998 66776654432 12445899999999999933211 1256889999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCC--CcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~--r~~~~~~~~ 160 (538)
||.+.+...+. ............+ ........+.+++.++|..+|++ |+++.++.+
T Consensus 280 Pf~~~~~~~~~-----------------~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 280 PFYAESLVETY-----------------GKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp TTCCSSHHHHH-----------------HHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCCCCChhHHH-----------------HhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 99876544111 0000000000000 00112234788999999888877 777766554
No 328
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.31 E-value=5.2e-10 Score=104.22 Aligned_cols=233 Identities=9% Similarity=0.018 Sum_probs=148.9
Q ss_pred cEEEEEEc--CCEEE-EEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 254 CVTGLAVG--GGFLF-SSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 254 ~V~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
...+++++ ++.++ +.+.++.|.+||..+.........+...+.++++.+++. ++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~~-- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQT-- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCCE--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceEe--
Confidence 56788887 66666 446788999999766543322223335678899988654 666665 889999997653221
Q ss_pred eeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEE
Q 009274 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWS 408 (538)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd 408 (538)
...... ......+++.++++.+++...++.|.+||..+.............+.+++++ ++++++...++.|.+||
T Consensus 101 --~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 101 --VLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp --ECCCCS-CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred --eeecCC-cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 111111 0112245677788877777778899999876554433333333467889998 34555555678999999
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcce-eeec-cccceEEEEEe--CCCEEEEEeCCC
Q 009274 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM-KSMQ-THKGSVFAVFL--EGKWLFTGGWDK 484 (538)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~-~h~~~v~~~~~--~~~~l~sgs~dg 484 (538)
............. ... ...++++++|.++++...++.|.+||..... .... .+...+.++.+ +|+++++...++
T Consensus 178 ~~~~~~~~~~~~~-~~~-p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 178 AESNNQVVLPFTD-ITA-PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TTTCCEEECCCSS-CCS-EEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred cCCCceEeecccC-CCC-ceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 8876544322221 122 3347899999877777778899999965422 2222 23345667766 788888888899
Q ss_pred eEEEEecCCCe
Q 009274 485 TVSVQELAGDE 495 (538)
Q Consensus 485 ~v~iwd~~~~~ 495 (538)
.|+++++...+
T Consensus 256 ~v~~~~~~~~~ 266 (270)
T 1rwi_B 256 RVVKLTSLEHH 266 (270)
T ss_dssp EEEEECCCGGG
T ss_pred EEEEEcCCCcc
Confidence 99999987654
No 329
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.31 E-value=4.2e-13 Score=129.68 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=73.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... ....+||+.|||||++ .+ ....++++|||||||++|+|++|+ |
T Consensus 167 ~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~p 229 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVL------MG--------NPYRGPELEMWSLGVTLYTLVFEENP 229 (335)
T ss_dssp SCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHH------TT--------CCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEeecccceECCCCCc---eeccCCCccccChhhh------cC--------CCCCCCcccchhHHHHHHHHHhCCCc
Confidence 467888 56666554432 4568999999999999 43 122378899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ....+. .....+.+++.+||..+|.+||++.++.+
T Consensus 230 f~~~~~~~~~------------~~~~~~---------------~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 230 FCELEETVEA------------AIHPPY---------------LVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CSSGGGGTTT------------CCCCSS---------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHhh------------ccCCCc---------------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9764322100 000000 01123778999999999999999888765
No 330
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.31 E-value=3.5e-13 Score=137.92 Aligned_cols=111 Identities=20% Similarity=0.178 Sum_probs=76.3
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++....... ....+||+.|||||++ . +.+++++|||||||++|+|++|. ||
T Consensus 187 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~~ll~g~~pf 247 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVL------K----------KKYNEKCDVWSCGVIMYILLCGYPPF 247 (504)
T ss_dssp SEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHH------T----------TCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHh------c----------cCCCchHHHHHHHHHHHHHHhCCCCC
Confidence 46888 66766654432 5578999999999998 2 35789999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.+.....+. .+.. .. ....... .......+.+++.+||..+|.+||++.++.+
T Consensus 248 ~~~~~~~~~~~i~~-~~-----~~~~~~~------------~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 248 GGQNDQDIIKKVEK-GK-----YYFDFND------------WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCSSHHHHHHHHHH-CC-----CCCCHHH------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHc-CC-----CCCCccc------------cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 876554222 0000 00 0000010 1112234788999999999999999987765
No 331
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.31 E-value=6.3e-13 Score=125.76 Aligned_cols=113 Identities=14% Similarity=0.252 Sum_probs=76.0
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC--cc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE--QF 89 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~--pf 89 (538)
+|+. |+++...... ...||+.|||||++ .+ ...+++++|||||||++|+|++|. ||
T Consensus 160 ~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~~~~ 219 (289)
T 4fvq_A 160 IKLSDPGISITVLPKD------ILQERIPWVPPECI------EN--------PKNLNLATDKWSFGTTLWEICSGGDKPL 219 (289)
T ss_dssp EEECCCCSCTTTSCHH------HHHHTTTTSCHHHH------HC--------GGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred eeeccCcccccccCcc------ccCCcCcccCHHHh------CC--------CCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence 7888 4555554332 46799999999999 22 245778999999999999999966 55
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhcC
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELIIK 168 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~~ 168 (538)
......... . ...............+.+++.+||+.+|.+||++.++.+.+.++..+
T Consensus 220 ~~~~~~~~~---------------------~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 220 SALDSQRKL---------------------Q-FYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp TTSCHHHHH---------------------H-HHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred cccchHHHH---------------------H-HhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 443222100 0 00000000111233588999999999999999999999999988754
No 332
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.31 E-value=4.1e-13 Score=132.04 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=79.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++...+...........+++.|||||++ .+ ..++.++|||||||+||||+| |.
T Consensus 249 ~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~il~el~t~g~ 313 (377)
T 3cbl_A 249 KNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL------NY---------GRYSSESDVWSFGILLWETFSLGA 313 (377)
T ss_dssp TCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHh------cc---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3568898 666665543222111224568899999998 22 467889999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+.....+.. .++ ........+.+++.+||+.+|.+||+..++.+.+..+.
T Consensus 314 ~p~~~~~~~~~~~~~~~~~-------~~~-------------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 314 SPYPNLSNQQTREFVEKGG-------RLP-------------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CSSTTSCHHHHHHHHHTTC-------CCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCC-------CCC-------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 998754331110000000 000 00011224778999999999999999999988877654
No 333
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.31 E-value=9.4e-13 Score=127.82 Aligned_cols=112 Identities=17% Similarity=0.151 Sum_probs=74.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++..... ...+||+.|||||++ .+ .....++.++|||||||+||||++|+ |
T Consensus 191 ~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~------~~------~~~~~~~~~~DiwslG~il~ell~g~~p 252 (348)
T 1u5q_A 191 GLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVI------LA------MDEGQYDGKVDVWSLGITCIELAERKPP 252 (348)
T ss_dssp TEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHH------HT------TSSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeeccCceecCCC------CcccCCcceeCHhhh------cc------ccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 568888 556665433 257899999999998 22 01256788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|......... .+. ....+ ..........+.+++.+||..+|.+||++.++.+.
T Consensus 253 ~~~~~~~~~~~~~~---------~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 253 LFNMNAMSALYHIA---------QNESP-----------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TTTSCHHHHHHHHH---------HSCCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCChHHHHHHHH---------hcCCC-----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 9764332110 000 00000 00000112237789999999999999998877653
No 334
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.31 E-value=7.6e-13 Score=124.48 Aligned_cols=110 Identities=15% Similarity=0.257 Sum_probs=71.0
Q ss_pred eeeeeccc--cccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCV--GSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+.++ +....... .....||+.|||||++ .+ ..+++++||||||+++|+|++|+ |
T Consensus 146 ~~~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 206 (279)
T 3fdn_A 146 GELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMI------EG---------RMHDEKVDLWSLGVLCYEFLVGKPP 206 (279)
T ss_dssp SCEEECSCCEESCC------------CCCCTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEeccccccCCccc----ccccCCCCCccCHhHh------cc---------CCCCccchhHhHHHHHHHHHHCCCC
Confidence 45788854 44444332 3468999999999999 44 56678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|......... .................+.+++.+||..+|.+||++.++.++
T Consensus 207 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 207 FEANTYQETY---------------------KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TCCSSHHHHH---------------------HHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCcHHHHH---------------------HHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 9875443111 000000000001112237789999999999999999887763
No 335
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.31 E-value=5.5e-13 Score=126.75 Aligned_cols=114 Identities=21% Similarity=0.345 Sum_probs=74.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ......||+.|||||++ .+. ....++.++|||||||+||+|++|+ |
T Consensus 174 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~~------~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 174 GHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESL------SET------RKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp SCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGC------CTT------CCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEecCCCccccccccc--cccCCcCCccccChhhh------ccC------CCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 467888 66666654432 24568999999999998 330 0112467899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHH-HH-hhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. ..+... .. .........+.+++.+||..+|.+||++.++.+
T Consensus 240 f~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 240 FMDERIMCLH---------------------SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SCCSSHHHHH---------------------HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCccHHHHH---------------------HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 9765333111 000000 00 000112234788999999999999999887654
No 336
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.31 E-value=5.5e-13 Score=130.88 Aligned_cols=65 Identities=18% Similarity=0.378 Sum_probs=41.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...... ..+..+||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 164 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~p 225 (371)
T 2xrw_A 164 CTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMIKGGVL 225 (371)
T ss_dssp SCEEECCCCC-------------------CTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEEeeccccccccc---ccCCceecCCccCHHHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCC
Confidence 467888 5666655332 24568999999999999 44 56789999999999999999999 9
Q ss_pred cchhhh
Q 009274 89 FTKELI 94 (538)
Q Consensus 89 f~~~~~ 94 (538)
|.+...
T Consensus 226 f~~~~~ 231 (371)
T 2xrw_A 226 FPGTDH 231 (371)
T ss_dssp SCCSSH
T ss_pred CCCCCH
Confidence 987543
No 337
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.31 E-value=4.3e-13 Score=128.71 Aligned_cols=132 Identities=17% Similarity=0.148 Sum_probs=70.1
Q ss_pred eeeec--cccccccccch-----hhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 13 VAKVG--CVGSRICDKEV-----GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
..|+. |+++.+..... .......+||+.|||||++...... ...++.++|||||||++|+|++
T Consensus 152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----------~~~~~~~~DiwslG~il~~l~~ 221 (316)
T 2ac3_A 152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEE----------ASIYDKRCDLWSLGVILYILLS 221 (316)
T ss_dssp SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHH----------HHHHTTTHHHHHHHHHHHHHHH
T ss_pred ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhccccc----------ccCCCcccccHhHHHHHHHHHH
Confidence 47888 55655432211 1113357799999999999432111 1346789999999999999999
Q ss_pred cC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHH----HHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|+ ||.+.......... ... ...........+. ..+..........+.+++.+||..+|.+||++.++.+
T Consensus 222 g~~pf~~~~~~~~~~~~---~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 222 GYPPFVGRCGSDCGWDR---GEA---CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp SSCSCCCCCCSCSCC-------C---CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCcccccccccccc---ccc---chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 99 99875332100000 000 0000000000000 0000011122234788999999999999999888765
No 338
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.31 E-value=3.5e-13 Score=129.99 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=78.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-c
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~-p 88 (538)
..|+. |+++.+.............||+.|||||++ .+ ..+++++|||||||+||+|+| |+ |
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~p 245 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF------ME---------GIFTSKTDTWSFGVLLWEIFSLGYMP 245 (327)
T ss_dssp CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred eEEECccccccccccccccccCCCcCCCcceeCHhHh------cC---------CCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 57888 455554433322223357899999999998 22 457789999999999999999 88 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhhc
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~~ 167 (538)
|.......+. .+... . ... ........+.+++.+||..+|.+||++.++.+.+..+..
T Consensus 246 ~~~~~~~~~~~~~~~~-~-----~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 246 YPSKSNQEVLEFVTSG-G-----RMD---------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp STTCCHHHHHHHHHTT-C-----CCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHhcC-C-----CCC---------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 9865433111 00000 0 000 001112247789999999999999999999988877654
Q ss_pred C
Q 009274 168 K 168 (538)
Q Consensus 168 ~ 168 (538)
.
T Consensus 305 ~ 305 (327)
T 2yfx_A 305 D 305 (327)
T ss_dssp C
T ss_pred C
Confidence 3
No 339
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.31 E-value=1.4e-12 Score=126.46 Aligned_cols=63 Identities=22% Similarity=0.371 Sum_probs=50.1
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++..... .....||+.|||||++ .+ ..+++++|||||||++|+|++|+
T Consensus 173 ~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~ 232 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVI------LA---------LGWSQPCDVWSIGCILIEYYLGFT 232 (339)
T ss_dssp CCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHH------TT---------SCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCceEeeCcccccCccc-----cccccCCccccChHHh------hC---------CCCCcchhhHHHHHHHHHHHhCCC
Confidence 4567888 555554433 3468999999999999 44 56789999999999999999999
Q ss_pred ccchhh
Q 009274 88 QFTKEL 93 (538)
Q Consensus 88 pf~~~~ 93 (538)
||....
T Consensus 233 pf~~~~ 238 (339)
T 1z57_A 233 VFPTHD 238 (339)
T ss_dssp SCCCSC
T ss_pred CCCCCC
Confidence 997643
No 340
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.31 E-value=8.4e-13 Score=124.33 Aligned_cols=118 Identities=20% Similarity=0.184 Sum_probs=75.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++........ ......||+.|||||++ .+ ..+++++||||||+++|+|+| |+
T Consensus 150 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~llt~g~~ 213 (281)
T 3cc6_A 150 ECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESI------NF---------RRFTTASDVWMFAVCMWEILSFGKQ 213 (281)
T ss_dssp TEEEECCCCGGGCC----------CCCCCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcEEeCccCCCccccccccc-ccccCCCCcceeCchhh------cc---------CCCCchhccHHHHHHHHHHHhCCCC
Confidence 457888 556655543221 13356789999999998 22 457789999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+. ......... ........+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 214 p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 214 PFFWLENKDVI---------------------GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TTTTSCGGGHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccCChHHHH---------------------HHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 99754333111 000000000 00111223788999999999999999999998887765
No 341
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.31 E-value=1.7e-12 Score=121.43 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=67.8
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhhee-eccccccCcchhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIR-CVSTKASDDNIAC 111 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~-~~~~~~~~~~~~~ 111 (538)
...||+.|||||++ .+ .....++.++|||||||++|+|++|+ ||.......+. .......
T Consensus 167 ~~~~t~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------ 228 (271)
T 3kmu_A 167 GRMYAPAWVAPEAL------QK------KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL------ 228 (271)
T ss_dssp TCBSCGGGSCHHHH------HS------CGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCC------
T ss_pred CccCCccccChhhh------cc------CCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCC------
Confidence 57899999999999 32 01123344799999999999999999 99865433111 0000000
Q ss_pred cchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 112 LGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
.... ......+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 229 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 ---------------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ---------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0000 111224788999999999999999999998887753
No 342
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.31 E-value=1.5e-09 Score=105.23 Aligned_cols=224 Identities=9% Similarity=0.071 Sum_probs=140.2
Q ss_pred CcEEEEEEc--CCEEEEEeCC---C--cEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcC------------
Q 009274 253 DCVTGLAVG--GGFLFSSSFD---K--SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS------------ 313 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~d---g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~------------ 313 (538)
..+.+++|+ |++|+.++.+ + .|.+||+.+++.......+ . +..+.|+|++..+++++..
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 357788998 8888887754 2 3888898888766555443 3 9999999987766555432
Q ss_pred --------------CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC-------cEEEEECCCC
Q 009274 314 --------------GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-------TIKAWSLLDG 372 (538)
Q Consensus 314 --------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-------~i~iwd~~~~ 372 (538)
...|++||+.++.....+.. . ......+++++ .++++..++ ...+|.+.++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 25788999876543122222 1 12245788999 777776542 3344444355
Q ss_pred ceeEEecCCCCCeEEEEEeCCEEEEEecC--------CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeC
Q 009274 373 TLSCTMSGHKSAVSTLAVCNGVLYSGSRD--------GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 373 ~~~~~~~~h~~~v~~l~~~~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 444 (538)
+. ..+..+ ..+..+.-.++.|+.++.+ ..|.+|| +++. ..+...+...+...+.|+ ++ ++++++.
T Consensus 209 ~~-~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 209 KE-EKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp EE-EEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred ce-EEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 43 334334 5555552225567666644 3688888 5543 333333333344336788 88 8899999
Q ss_pred CCcEEEEeCC-cceeeeccccceEEEEEeCCCEEEEEeCCCeE-EEEecCCCe
Q 009274 445 SGSIKVWRND-KFMKSMQTHKGSVFAVFLEGKWLFTGGWDKTV-SVQELAGDE 495 (538)
Q Consensus 445 dg~i~iwd~~-~~~~~~~~h~~~v~~~~~~~~~l~sgs~dg~v-~iwd~~~~~ 495 (538)
++.+++| .. .....+..+...|.++++...++++++.++.. .+|.+. ++
T Consensus 282 ~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp TTEEEEE-EESSSEEEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES-SS
T ss_pred CCcEEEE-EcCCceEEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC-Cc
Confidence 9999998 64 22334444577888888744777788877765 777765 44
No 343
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.30 E-value=5.8e-13 Score=131.72 Aligned_cols=123 Identities=18% Similarity=0.204 Sum_probs=77.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+|+....... .....||+.|||||++ .| ...++.++|||||||+||+|++|+
T Consensus 178 ~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~ 240 (394)
T 4e7w_A 178 SGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELI------FG--------ATNYTTNIDIWSTGCVMAELMQGQP 240 (394)
T ss_dssp TTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 4568888 66766654432 3468999999999998 43 235789999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHh-----------------hhcCccchHHHHHhhhhccCC
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLEN-----------------KFGSEFVSLQLMFCQCLNFDP 149 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~l~~~p 149 (538)
||.+....... .+. + ....+. .+........ ........+.+++.+||..+|
T Consensus 241 pf~~~~~~~~l~~i~-~-------~~g~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (394)
T 4e7w_A 241 LFPGESGIDQLVEII-K-------VLGTPS--REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTP 310 (394)
T ss_dssp SSCCSSHHHHHHHHH-H-------HHCCCC--HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred CCCCCCHHHHHHHHH-H-------HhCCCC--HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCCh
Confidence 99875433111 000 0 000000 0000000000 001122347889999999999
Q ss_pred CCCcchhhHHH
Q 009274 150 GCRPLLTNVWK 160 (538)
Q Consensus 150 ~~r~~~~~~~~ 160 (538)
.+||++.++.+
T Consensus 311 ~~R~t~~e~l~ 321 (394)
T 4e7w_A 311 SARLTAIEALC 321 (394)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999887665
No 344
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.30 E-value=5.1e-13 Score=127.98 Aligned_cols=121 Identities=17% Similarity=0.318 Sum_probs=69.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceee--eccccccccccCcchhhhhhhhhhhhc
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVE--CEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~--~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
++..|+. |+++.+.............||+.|||||++ .+.... .......++.++|||||||+||+|++|
T Consensus 162 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g 235 (313)
T 3cek_A 162 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI------KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235 (313)
T ss_dssp TTEEEECCCSSSCC--------------CCGGGCCHHHH------TTCC----------CCCHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHH------hhcccccccccccccCCchHHHHHHHHHHHHHHhC
Confidence 4568898 566666555433334567899999999998 321110 011124678899999999999999999
Q ss_pred C-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh----hc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK----FG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+ ||......... ........ .+ .....+.+++.+||..+|.+||++.++.+
T Consensus 236 ~~pf~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 236 KTPFQQIINQISK-----------------------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp SCTTTTCCSHHHH-----------------------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhhHHHHHHH-----------------------HHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 9 99754222000 00000000 00 11224788999999999999999887765
No 345
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.30 E-value=7e-13 Score=127.56 Aligned_cols=120 Identities=19% Similarity=0.225 Sum_probs=80.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...............||+.|||||++ .+ ..++.++|||||||++|+|+| |+
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 239 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL------KD---------GVFTTYSDVWSFGVVLWEIATLAEQ 239 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhh------cc---------CCCCchhhHHHHHHHHHHHHhcCCC
Confidence 467888 566665544322223456889999999998 32 457789999999999999999 77
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+........ .. .........+.+++.+||..+|.+||++.++.+.+.+.+
T Consensus 240 p~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 240 PYQGLSNEQVLRFVMEGG-----LL---------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTTTSCHHHHHHHHHTTC-----CC---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred ccccCCHHHHHHHHHcCC-----cC---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 998754431110000000 00 000111223778999999999999999999998887765
No 346
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.30 E-value=2.2e-12 Score=124.89 Aligned_cols=134 Identities=13% Similarity=0.171 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhh--hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc-
Q 009274 12 SVAKVG--CVGSRICDKEVGLF--LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG- 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg- 86 (538)
+.+|+. |+++.+........ ....+||+.|||||++ .+.. .......+.++|||||||+||||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~---~~~~~~~~~~~DiwslG~il~el~tg~ 249 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL------DESL---NRNHFQSYIMADMYSFGLILWEVARRC 249 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHH------TTCC---CTTCTHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhc------cccc---CCccccCccccchHHHHHHHHHHHhcc
Confidence 468888 56665544332211 1257899999999999 3300 00011122349999999999999999
Q ss_pred ---------C-ccchhhhhhee------eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCC
Q 009274 87 ---------E-QFTKELIDYIR------CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 87 ---------~-pf~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
+ ||......... ....... ....+..+. ....+ ..+.+++.+||+.+|.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~--------~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 250 VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL-----RPSFPNRWS--SDECL--------RQMGKLMTECWAHNPA 314 (337)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC-----CCCCCGGGG--GSHHH--------HHHHHHHHHHSCSSGG
T ss_pred CcccccccccccHhhhcCCCCchhhhHHHHhhhcc-----Cccccccch--hhHHH--------HHHHHHHHHhhhhChh
Confidence 4 55432111000 0000000 000000000 00011 1277899999999999
Q ss_pred CCcchhhHHHHHHHhhcCC
Q 009274 151 CRPLLTNVWKCIRELIIKP 169 (538)
Q Consensus 151 ~r~~~~~~~~~l~~l~~~~ 169 (538)
+||++.++.+.+.++....
T Consensus 315 ~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp GSCCHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHhhc
Confidence 9999999999998887543
No 347
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.30 E-value=9.6e-13 Score=128.74 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=78.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++.+..... .....||+.|||||++ .+ ...++.++|||||||+||+|++|+
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~ell~g~~ 230 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELI------FG--------NQHYTTAVDIWSVGCIFAEMMLGEP 230 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 3568898 66776665432 3467899999999998 33 234789999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHH-----------------HHHHHHhhhcCccchHHHHHhhhhccCCC
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEK-----------------VTYLLENKFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
||.+............. ...+....... ...............+.+++.+||+.+|.
T Consensus 231 pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 304 (360)
T 3e3p_A 231 IFRGDNSAGQLHEIVRV------LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPE 304 (360)
T ss_dssp SSCCSSHHHHHHHHHHH------HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred CcCCCChHHHHHHHHHH------cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCcc
Confidence 99875433111000000 00000000000 00000000011123478899999999999
Q ss_pred CCcchhhHHH
Q 009274 151 CRPLLTNVWK 160 (538)
Q Consensus 151 ~r~~~~~~~~ 160 (538)
+||++.++.+
T Consensus 305 ~Rpt~~e~l~ 314 (360)
T 3e3p_A 305 ERMKPYEALC 314 (360)
T ss_dssp GSCCHHHHTT
T ss_pred ccCCHHHHhc
Confidence 9999887665
No 348
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.30 E-value=8.8e-13 Score=126.91 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=69.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-+|+. |+++....... ......||+.|||||++ .| ...++.++|||||||++|+|++|+ |
T Consensus 137 ~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~p 200 (324)
T 3mtl_A 137 GELKLADFGLARAKSIPTK--TYDNEVVTLWYRPPDIL------LG--------STDYSTQIDMWGVGCIFYEMATGRPL 200 (324)
T ss_dssp CCEEECSSSEEECC--------------CGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEccCcccccccCCcc--ccccccCcccccChhhh------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 457888 55555543322 25568999999999998 33 245788999999999999999999 9
Q ss_pred cchhhhhhee-e----ccccccCcchhhcchhhHHHHHHHHH---------HHhhhcCccchHHHHHhhhhccCCCCCcc
Q 009274 89 FTKELIDYIR-C----VSTKASDDNIACLGMYMAWMEKVTYL---------LENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (538)
Q Consensus 89 f~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~l~~~p~~r~~ 154 (538)
|.+....... . +...... .+........ .... .....+.....+.+++.+||..+|.+||+
T Consensus 201 f~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 275 (324)
T 3mtl_A 201 FPGSTVEEQLHFIFRILGTPTEE----TWPGILSNEE-FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS 275 (324)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCTT----TSTTGGGCHH-HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred CCCCCHHHHHHHHHHHhCCCChH----hchhhhcchh-hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC
Confidence 9875443111 0 0000000 0000000000 0000 00001112234788999999999999999
Q ss_pred hhhHHH
Q 009274 155 LTNVWK 160 (538)
Q Consensus 155 ~~~~~~ 160 (538)
+.++.+
T Consensus 276 ~~e~l~ 281 (324)
T 3mtl_A 276 AEDAMK 281 (324)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 887665
No 349
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.30 E-value=6.7e-13 Score=127.13 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=73.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++.+.............||+.|+|||++ .+ ..+++++||||||+++|+|++ |.
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 248 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL------AD---------RVYTSKSDVWAFGVTMWEIATRGMT 248 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHH------HS---------SCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhh------cC---------CCccchhhhHHHHHHHHHHHhcCCC
Confidence 357888 566666544332223457789999999999 33 567889999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+........ .. .........+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 249 p~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 249 PYPGVQNHEMYDYLLHGH-----RL---------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp SSTTCCGGGHHHHHHTTC-----CC---------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHcCC-----CC---------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 997754331110000000 00 000111224788999999999999999999999888765
No 350
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.30 E-value=3.3e-08 Score=93.19 Aligned_cols=234 Identities=10% Similarity=0.069 Sum_probs=147.2
Q ss_pred cCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe--cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 009274 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (538)
.+...+.+++++ +..+++...++.|..||.+ ++. ..+. .....+.++++.++ +.++++...++.|..||. ++
T Consensus 54 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 54 TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-TC
T ss_pred cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-CC
Confidence 455678999997 6666666668899999986 333 3333 34567899999875 457777777889999987 32
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CC-EEEEEecCC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NG-VLYSGSRDG 402 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~-~l~s~s~dg 402 (538)
.. ...............++.++++..++...++.|..||. +++.... +..+...+.+++++ ++ +.++...++
T Consensus 130 ~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 204 (299)
T 2z2n_A 130 KI----REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGN 204 (299)
T ss_dssp CE----EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred CE----EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCc
Confidence 21 11111111112234466777877777667789999998 6665433 33445668899998 34 545555678
Q ss_pred cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeee--ccccceEEEEEe-CCCEEEE
Q 009274 403 TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL-EGKWLFT 479 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~h~~~v~~~~~-~~~~l~s 479 (538)
.|..||. +++... +...........++++++|++.++...++.|..||.......+ ..+...+.++.+ ++++.++
T Consensus 205 ~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~v~ 282 (299)
T 2z2n_A 205 KIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIWFA 282 (299)
T ss_dssp EEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEEEE
T ss_pred eEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEecCCCEEEE
Confidence 9999999 666433 3222112223346889999877666678899999965433333 233455666655 5555444
Q ss_pred EeCCCeEEEEecCCCe
Q 009274 480 GGWDKTVSVQELAGDE 495 (538)
Q Consensus 480 gs~dg~v~iwd~~~~~ 495 (538)
. ..+.+..++..+.+
T Consensus 283 ~-~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 283 M-ECDKIGKLTLIKDN 297 (299)
T ss_dssp E-TTTEEEEEEEC---
T ss_pred e-cCCcEEEEEcCccc
Confidence 4 46778788876654
No 351
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.30 E-value=8.6e-13 Score=133.11 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=82.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.+.... ......||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 320 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~~l~el~t~g~ 383 (454)
T 1qcf_A 320 SLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAI------NF---------GSFTIKSDVWSFGILLMEIVTYGR 383 (454)
T ss_dssp TCCEEECSTTGGGGBCCHHHH-TTCSSSSCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEeeCCCceEcCCCcee-ccCCCcccccccCHHHh------cc---------CCCCcHHHHHhHHHHHHHHHhCCC
Confidence 3568998 677776654322 23456788999999998 22 557899999999999999999 99
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+. ..+....... .......+.+++.+||..+|.+||+..++.+.+..+
T Consensus 384 ~P~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 384 IPYPGMSNPEVI---------------------RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp CSSTTCCHHHHH---------------------HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 99875433111 0000000000 011223478899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 443 ~ 443 (454)
T 1qcf_A 443 Y 443 (454)
T ss_dssp S
T ss_pred H
Confidence 5
No 352
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.30 E-value=5.6e-13 Score=130.74 Aligned_cols=123 Identities=20% Similarity=0.209 Sum_probs=71.1
Q ss_pred eeeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
+..+|+. |+++......... ......||+.|||||++ .+ ..+++++|||||||+||||++ |
T Consensus 183 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~SlG~il~ellt~g 247 (373)
T 2qol_A 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI------AY---------RKFTSASDVWSYGIVLWEVMSYG 247 (373)
T ss_dssp TCCEEECCC----------------------CTTSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEECcCccccccccCCccceeccCCCcCCCccChhhh------cc---------CCcCchhcHHHHHHHHHHHHhCC
Confidence 3568888 6677666543221 12235678899999998 22 457789999999999999998 9
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
+ ||.......+. .+. . ....+ ........+.+++.+||+.+|.+||+..++.+.+.+
T Consensus 248 ~~P~~~~~~~~~~~~i~---~-----~~~~~-------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 248 ERPYWEMSNQDVIKAVD---E-----GYRLP-------------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp -CTTTTCCHHHHHHHHH---T-----TEECC-------------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHH---c-----CCCCC-------------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 9 99765433111 000 0 00000 000122347889999999999999999999999888
Q ss_pred hhcCC
Q 009274 165 LIIKP 169 (538)
Q Consensus 165 l~~~~ 169 (538)
+...+
T Consensus 307 ~~~~~ 311 (373)
T 2qol_A 307 LIRNP 311 (373)
T ss_dssp HHHCG
T ss_pred HHhCc
Confidence 87543
No 353
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.30 E-value=8.7e-13 Score=131.28 Aligned_cols=111 Identities=10% Similarity=-0.032 Sum_probs=74.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeecc-ccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEE-SEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~-~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+.+|+. |+++..... ....+| +.|||||++...... ... ....++.++|||||||+||+|+||+
T Consensus 248 ~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~------~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 248 GGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLP------FGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTST------TGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccc------cccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 348999 666666544 456899 999999999433100 000 2356788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
||............ ... .......+.+++.+||..+|.+||++.++.
T Consensus 316 Pf~~~~~~~~~~~~---------~~~----------------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 316 PNTDDAALGGSEWI---------FRS----------------CKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCCTTGGGSCSGGG---------GSS----------------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCcchhhhHHHH---------Hhh----------------cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99876554221000 000 001112377899999999999999987654
No 354
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.30 E-value=9.3e-13 Score=123.00 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=79.9
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++..|+. |+++....... .......||+.|+|||++ .+ ..+++++||||||+++|+|++ |+
T Consensus 140 ~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~g~ 203 (267)
T 3t9t_A 140 NQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVF------SF---------SRYSSKSDVWSFGVLMWEVFSEGK 203 (267)
T ss_dssp GGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEcccccccccccccc-cccccccccccccChhhh------cC---------CCccchhchhhhHHHHHHHhccCC
Confidence 3457888 55565543322 223457889999999998 22 456789999999999999999 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.... .. .........+.+++.+||..+|.+||++.++.+.+.++
T Consensus 204 ~p~~~~~~~~~~~~i~~~~--------~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 204 IPYENRSNSEVVEDISTGF--------RL-------------YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp CTTTTCCHHHHHHHHHTTC--------CC-------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhcCC--------cC-------------CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99875433111 000000 00 00001122377899999999999999999999988876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 263 ~ 263 (267)
T 3t9t_A 263 A 263 (267)
T ss_dssp H
T ss_pred H
Confidence 5
No 355
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.29 E-value=2.5e-13 Score=131.42 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=56.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++...... .....||+.|||||++ .+ ..+++++|||||||++|+|++|+
T Consensus 167 ~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~ 227 (336)
T 3fhr_A 167 DAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVL------GP---------EKYDKSCDMWSLGVIMYILLCGFP 227 (336)
T ss_dssp TCCEEECCCTTCEEC-----------------------------------------CHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CceEEEeccccceeccccc----cccCCCCcCccChhhh------CC---------CCCCchhhHHHHHHHHHHHHHCCC
Confidence 3457888 5566555432 4568999999999998 33 56778999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||.......+.. .............+..........+.+++.+||..+|.+||++.++.+
T Consensus 228 pf~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 228 PFYSNTGQAISP-------------GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CC----------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCccchhhhh-------------hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 998764442110 000000000000000011122234788999999999999999988776
No 356
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.29 E-value=9.1e-13 Score=124.24 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=79.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++........ ......||+.|||||++ .+ ..+++++||||||+++|+|+| |+
T Consensus 157 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~~l~~l~t~g~~ 220 (283)
T 3gen_A 157 GVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVL------MY---------SKFSSKSDIWAFGVLMWEIYSLGKM 220 (283)
T ss_dssp SCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHH------HH---------CCCSHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEccccccccccccccc-cccCCccCcccCCHHHh------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 566666544322 23457788999999998 32 457789999999999999999 99
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......... .+........ ......+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 221 p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 221 PYERFTNSETAE---------------------HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp TTTTSCHHHHHH---------------------HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CccccChhHHHH---------------------HHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 998754331110 0000000000 011123778999999999999999999998887765
No 357
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=1.7e-12 Score=125.44 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=74.9
Q ss_pred eeeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
+...|+. |+++.+....... ......||+.|||||++ .+ ..++.++|||||||+||+|++ |
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g 247 (333)
T 1mqb_A 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI------SY---------RKFTSASDVWSFGIVMWEVMTYG 247 (333)
T ss_dssp TCCEEECCCCC-----------------CCCGGGSCHHHH------HS---------CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcEEECCCCcchhhccccccccccCCCCccccccCchhc------cc---------CCCCchhhhHHHHHHHHHHHcCC
Confidence 3467888 5566665433221 12345678999999998 33 567889999999999999999 9
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
+ ||.......+. .+.. . ...+ ........+.+++.+||+.+|.+||+..++.+.+.+
T Consensus 248 ~~pf~~~~~~~~~~~~~~--~------~~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 306 (333)
T 1mqb_A 248 ERPYWELSNHEVMKAIND--G------FRLP-------------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306 (333)
T ss_dssp CCTTTTCCHHHHHHHHHT--T------CCCC-------------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHC--C------CcCC-------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 9 99764333111 0000 0 0000 000112247889999999999999999999998888
Q ss_pred hhcC
Q 009274 165 LIIK 168 (538)
Q Consensus 165 l~~~ 168 (538)
+...
T Consensus 307 ~~~~ 310 (333)
T 1mqb_A 307 LIRA 310 (333)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 7644
No 358
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.29 E-value=1.3e-09 Score=116.29 Aligned_cols=194 Identities=10% Similarity=0.001 Sum_probs=125.4
Q ss_pred cCCcCeEEEEEecCCCCEEEEEcC----CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc--
Q 009274 290 GHDHKVMAVVYVDEDQPLCISGDS----GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT-- 363 (538)
Q Consensus 290 ~h~~~v~~l~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-- 363 (538)
+|...+.+++|||++..++++.+. +..|++||+.++...... ..... .....+|++||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~----~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGG----KYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCC----TTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcc----cccceEEecCCCEEEEEEecCCCC
Confidence 355678999999987766555443 468999999987643110 11111 0024589999999999988776
Q ss_pred -----------EEEEECCCCc----eeEEecCCCCCeEEEEEe--CCEEEEEecCC----cEEEEECCCCceeEEEecCC
Q 009274 364 -----------IKAWSLLDGT----LSCTMSGHKSAVSTLAVC--NGVLYSGSRDG----TIRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 364 -----------i~iwd~~~~~----~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~ 422 (538)
|++|++.+++ ++.....|...+.++.|+ +++|+.++.++ .|.+||..+++. ..+..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~ 271 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV 271 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence 9999998876 333334566788899999 44677666555 677777655543 3343333
Q ss_pred CCceEEEEEEcCCCCEEEEEe---CCCcEEEEeCCcc----eeeeccc--cceEEEEEe-CCCEEEEEeCCCeEEEEecC
Q 009274 423 SGAVSSVLSLTAVQHTLVVSH---ESGSIKVWRNDKF----MKSMQTH--KGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (538)
Q Consensus 423 ~~~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~----~~~~~~h--~~~v~~~~~-~~~~l~sgs~dg~v~iwd~~ 492 (538)
... ... .+ +++.+++.+. .++.|.+||.... ...+..| ...+..+++ ++.++++...|+..++|.+.
T Consensus 272 ~~~-~~~-~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 272 GAK-YEV-HA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp SCC-EEE-EE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred Cce-EEE-Ee-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 333 222 33 5566444443 2578999996542 2344333 445777776 77788888999988888654
No 359
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=7.3e-13 Score=125.16 Aligned_cols=119 Identities=15% Similarity=0.123 Sum_probs=79.6
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..|+. |+++.+....... ......||+.|||||++ .+ ..+++++||||||+++|+|+| |+
T Consensus 147 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~ 211 (287)
T 1u59_A 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI------NF---------RKFSSRSDVWSYGVTMWEALSYGQ 211 (287)
T ss_dssp TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CCEEECcccceeeeccCcceeeccccccccccccCHHHh------cc---------CCCCchhhHHHHHHHHHHHHcCCC
Confidence 467888 5566654332211 12346789999999998 22 457789999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. . ..+ .........+.+++.+||..+|.+||++.++.+.+..+
T Consensus 212 ~p~~~~~~~~~~~~i~~-~--------~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 212 KPYKKMKGPEVMAFIEQ-G--------KRM------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp CTTTTCCTHHHHHHHHT-T--------CCC------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHhc-C--------CcC------------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99865333111 0000 0 000 00011223478899999999999999999999988887
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 271 ~ 271 (287)
T 1u59_A 271 Y 271 (287)
T ss_dssp H
T ss_pred H
Confidence 6
No 360
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.29 E-value=1.1e-12 Score=126.64 Aligned_cols=68 Identities=21% Similarity=0.345 Sum_probs=45.6
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+...|+. |+++........ ....+||+.|||||++ .+ ...+++++|||||||++|+|++|+
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~ 236 (329)
T 3gbz_A 173 TPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPPEIL------LG--------SRHYSTSVDIWSIACIWAEMLMKTP 236 (329)
T ss_dssp CCEEEECCTTHHHHHC-------------CCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cceEEECcCCCccccCCcccc--cCCCcCCccccCHHHh------cC--------CCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3457888 556665533222 4568899999999999 33 234789999999999999999999
Q ss_pred ccchhhh
Q 009274 88 QFTKELI 94 (538)
Q Consensus 88 pf~~~~~ 94 (538)
||.....
T Consensus 237 pf~~~~~ 243 (329)
T 3gbz_A 237 LFPGDSE 243 (329)
T ss_dssp SSCCSSH
T ss_pred CcCCCCH
Confidence 9987533
No 361
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.29 E-value=4.4e-13 Score=129.24 Aligned_cols=131 Identities=16% Similarity=0.170 Sum_probs=82.2
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..|+. |+++........ .......||+.|||||++ .+ ..+++++|||||||++|+|++|.
T Consensus 164 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~ll~g~~ 228 (327)
T 3lxl_A 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL------SD---------NIFSRQSDVWSFGVVLYELFTYCD 228 (327)
T ss_dssp TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred CCEEEcccccceecccCCccceeeccCCccccccCHHHh------cc---------CCCChHHhHHHHHHHHHHHHhCCC
Confidence 457888 556655433221 123357799999999998 32 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-----cCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-----GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||............ .......... ......... ......+.+++.+||+.+|.+||++.++.+.+
T Consensus 229 p~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 298 (327)
T 3lxl_A 229 KSCSPSAEFLRMMG---------CERDVPALSR-LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298 (327)
T ss_dssp GGGSHHHHHHHHCC-------------CCHHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCccccchhhhhcc---------cccccccHHH-HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 98875443111000 0000111111 111111111 12223488999999999999999999999988
Q ss_pred HHhhc
Q 009274 163 RELII 167 (538)
Q Consensus 163 ~~l~~ 167 (538)
..++.
T Consensus 299 ~~~~~ 303 (327)
T 3lxl_A 299 DMLWS 303 (327)
T ss_dssp HHC--
T ss_pred HHHHh
Confidence 88763
No 362
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=9.1e-13 Score=128.99 Aligned_cols=124 Identities=14% Similarity=0.108 Sum_probs=76.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++..... .+..+||+.|||||++ .+ ...++.++|||||||++|+|++|+ |
T Consensus 165 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~p 225 (367)
T 1cm8_A 165 CELKILDFGLARQADSE-----MTGYVVTRWYRAPEVI------LN--------WMRYTQTVDIWSVGCIMAEMITGKTL 225 (367)
T ss_dssp CCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHH------HT--------TTCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeeecccccccc-----cCcCcCCCCcCCHHHH------hC--------CCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 467888 666765543 4568999999999998 22 245789999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHH---------HHHHHHHHHh-------hhcCccchHHHHHhhhhccCCCCC
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAW---------MEKVTYLLEN-------KFGSEFVSLQLMFCQCLNFDPGCR 152 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-------~~~~~~~~l~~~~~~~l~~~p~~r 152 (538)
|.+.....+.....+. ...++... .......+.. ........+.+++.+||..+|.+|
T Consensus 226 f~~~~~~~~l~~i~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R 299 (367)
T 1cm8_A 226 FKGSDHLDQLKEIMKV------TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR 299 (367)
T ss_dssp SCCSSHHHHHHHHHHH------HCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTS
T ss_pred CCCCCHHHHHHHHHHh------cCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHC
Confidence 9875433111000000 00000000 0000000000 001122347889999999999999
Q ss_pred cchhhHHH
Q 009274 153 PLLTNVWK 160 (538)
Q Consensus 153 ~~~~~~~~ 160 (538)
|++.++.+
T Consensus 300 ~t~~e~l~ 307 (367)
T 1cm8_A 300 VTAGEALA 307 (367)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99887665
No 363
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.29 E-value=5.3e-13 Score=127.67 Aligned_cols=120 Identities=20% Similarity=0.374 Sum_probs=69.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++....... ......||+.|+|||++ .+ ..++.++||||||+++|+|++|.
T Consensus 172 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~ 234 (310)
T 2wqm_A 172 TGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI------HE---------NGYNFKSDIWSLGCLLYEMAALQS 234 (310)
T ss_dssp TSCEEECCC--------------------CCSSCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeccceeeecCCCc--cccccCCCeeEeChHHh------CC---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3467888 45565554332 24467899999999998 43 56788999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHH--HHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+....... . ...+... +..........+.+++.+||..+|.+||++.++.+.+.++
T Consensus 235 p~~~~~~~~~~---------------~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 235 PFYGDKMNLYS---------------L----CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp TTC---CCHHH---------------H----HHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccchhHHH---------------H----HHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 99764222000 0 0000000 0000011122478899999999999999999999888877
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 296 ~ 296 (310)
T 2wqm_A 296 H 296 (310)
T ss_dssp H
T ss_pred H
Confidence 5
No 364
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.29 E-value=1.2e-12 Score=124.75 Aligned_cols=116 Identities=17% Similarity=0.196 Sum_probs=75.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...............||+.|+|||++ .+ .....+.++||||||+++|+|++|+ |
T Consensus 146 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~-------~~~~~~~~~Di~slG~il~~l~~g~~p 212 (305)
T 2wtk_C 146 GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA------NG-------LDTFSGFKVDIWSAGVTLYNITTGLYP 212 (305)
T ss_dssp CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHH------TC-------CSCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEeeccccccccCccccccccccCCCCCCCcChhhc------cC-------cccCCcchhhHHHHHHHHHHHHhCCCC
Confidence 456787 555555432222224467899999999998 33 1233467999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|.......+. ..+..............+.+++.+||..+|.+||++.++.+.
T Consensus 213 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 213 FEGDNIYKLF---------------------ENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSSHHHHH---------------------HHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCchHHHHH---------------------HHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 9875433111 000000000001122347889999999999999999887753
No 365
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.29 E-value=6.3e-13 Score=129.83 Aligned_cols=110 Identities=16% Similarity=0.151 Sum_probs=61.7
Q ss_pred eeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccc-cccCcchhhhhhhhhhhhcC-cc
Q 009274 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSV-GYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~-~~~sDi~slG~~l~~lltg~-pf 89 (538)
.|+. |+|+....... ....+||+.|||||++ .+ ..+ +.++|||||||+||+|++|+ ||
T Consensus 157 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~~DiwslG~il~ell~g~~Pf 218 (361)
T 3uc3_A 157 LKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVL------LR---------QEYDGKIADVWSCGVTLYVMLVGAYPF 218 (361)
T ss_dssp EEECCCCCC------------------CTTSCHHHH------HC---------SSCCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred EEEeecCccccccccCC---CCCCcCCCCcCChhhh------cC---------CCCCCCeeeeehhHHHHHHHHhCCCCC
Confidence 7888 55554333222 4467899999999998 33 333 34599999999999999999 99
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-----hcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-----FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
......... . .....+.... .......+.+++.+||..+|.+||++.++.++
T Consensus 219 ~~~~~~~~~-------------~-------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 219 EDPEEPRDY-------------R-------KTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp C----CCCH-------------H-------HHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCccHHHH-------------H-------HHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 875332100 0 0000000000 00112347789999999999999999887653
No 366
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.28 E-value=7.9e-13 Score=124.39 Aligned_cols=111 Identities=20% Similarity=0.287 Sum_probs=73.0
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ +++....... ......||+.|||||++ .+ ..++.++||||||+++|+|++|+ |
T Consensus 153 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 215 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQM------NR---------MSYNEKSDIWSLGCLLYELCALMPP 215 (279)
T ss_dssp SCEEECCCCHHHHC---CH--HHHHHHSCCTTCCHHHH------HC---------C-CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEecCchheeeccccc--cccccCCCccccChHHh------cc---------CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 4578884 4555543322 24468899999999998 33 45778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. ..+........+ .....+.+++.+||..+|.+||++.++.+
T Consensus 216 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 267 (279)
T 2w5a_A 216 FTAFSQKELA---------------------GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267 (279)
T ss_dssp SCCSSHHHHH---------------------HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcccCHHHHH---------------------HHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 9875433111 000000000001 11234788999999999999999887765
No 367
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.28 E-value=8.7e-13 Score=123.29 Aligned_cols=118 Identities=17% Similarity=0.169 Sum_probs=78.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...+.... ......||+.|||||++ .+ ..+++++||||||+++|+|+| |+
T Consensus 141 ~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~g~~ 204 (268)
T 3sxs_A 141 LCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVF------HY---------FKYSSKSDVWAFGILMWEVFSLGKM 204 (268)
T ss_dssp CCEEECCTTCEEECCTTCEE-ECCSCCCCGGGCCHHHH------HH---------SEEETTHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEccCccceecchhhhh-cccCCCcCcccCCHHHH------hc---------cCCchhhhhHHHHHHHHHHHcCCCC
Confidence 457888 455555443221 13356778899999998 32 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||......... .+..... ... .......+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 205 p~~~~~~~~~~~~~~~~~~-----~~~----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 205 PYDLYTNSEVVLKVSQGHR-----LYR----------------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp TTTTSCHHHHHHHHHTTCC-----CCC----------------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CccccChHHHHHHHHcCCC-----CCC----------------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 99865433111 0000000 000 0011123778999999999999999999998877664
No 368
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.28 E-value=2.1e-12 Score=123.99 Aligned_cols=130 Identities=16% Similarity=0.101 Sum_probs=77.7
Q ss_pred eeeeeecc--ccccccccc---hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh
Q 009274 11 KSVAKVGC--VGSRICDKE---VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (538)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt 85 (538)
++..|+.+ +++...... .........||+.|||||++ .+...+.......+++++|||||||++|+|++
T Consensus 165 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~------~~~~~~~~~~~~~~~~~~Di~slG~il~el~~ 238 (319)
T 2y4i_B 165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII------RQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238 (319)
T ss_dssp --CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHH------SCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecCCccccccccccccccccccCCCcccccChHHh------hhccccccccccCCCchhhHHHHHHHHHHHHh
Confidence 45678884 444432211 11113346799999999999 43222122223457889999999999999999
Q ss_pred cC-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHH
Q 009274 86 GE-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (538)
Q Consensus 86 g~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~ 163 (538)
|+ ||.......+. .+.... .+..........+.+++.+||..+|.+||++.++.+.+.
T Consensus 239 g~~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 239 REWPFKTQPAEAIIWQMGTGM--------------------KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp SSCSSSSCCHHHHHHHHHTTC--------------------CCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHhccCC--------------------CCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 99 99875443111 000000 000000012234888999999999999999999988877
Q ss_pred Hhh
Q 009274 164 ELI 166 (538)
Q Consensus 164 ~l~ 166 (538)
.+.
T Consensus 299 ~l~ 301 (319)
T 2y4i_B 299 KLP 301 (319)
T ss_dssp TC-
T ss_pred HHH
Confidence 664
No 369
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.28 E-value=3.2e-13 Score=133.69 Aligned_cols=75 Identities=13% Similarity=0.159 Sum_probs=54.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++.+...... .....+||+.|||||++....... ....++.++|+|||||++|||++|+ |
T Consensus 199 g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~--------~~~~~~~~~DiwSlGvilyelltG~~P 269 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGP--------GTGSYGPECDWWALGVFAYEMFYGQTP 269 (412)
T ss_dssp SCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCT--------TCSEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCc--------CCCCCChHHhhhHHhHHHHHHHhCCCC
Confidence 567888 677776544321 133589999999999994432211 1256789999999999999999999 9
Q ss_pred cchhhhh
Q 009274 89 FTKELID 95 (538)
Q Consensus 89 f~~~~~~ 95 (538)
|.+.+..
T Consensus 270 f~~~~~~ 276 (412)
T 2vd5_A 270 FYADSTA 276 (412)
T ss_dssp TCCSSHH
T ss_pred CCCCCHH
Confidence 9876544
No 370
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=5.4e-09 Score=110.64 Aligned_cols=270 Identities=13% Similarity=0.071 Sum_probs=169.4
Q ss_pred eeEEeecCCeEEEEEeecCCCc----------E-EEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecC--Cc---CeE
Q 009274 233 DLVNGLSKGNVKFKDLQGHRDC----------V-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH--DH---KVM 296 (538)
Q Consensus 233 ~~~~~~~~~~~~i~~l~~h~~~----------V-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h--~~---~v~ 296 (538)
.++.-.......+|.+..+... + ..+++.++.++.++.|+.|..+|..+|+.+..+... .. .+.
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~ 160 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTIT 160 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCC
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCcccc
Confidence 3444444444567877644321 1 234556889999999999999999999999888753 11 111
Q ss_pred -EEEEecCCCCEEEEEc-----CCCcEEEEEccCCCCCcceeeecccC--------------------------Cceeee
Q 009274 297 -AVVYVDEDQPLCISGD-----SGGGIFVWSFSFPLGHEPLKKWNEEK--------------------------DWRYSG 344 (538)
Q Consensus 297 -~l~~~~~~~~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~--------------------------~~~~~~ 344 (538)
+.... ++.+++..+ .+|.|+.||..+++............ ......
T Consensus 161 ~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~ 238 (689)
T 1yiq_A 161 GAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWD 238 (689)
T ss_dssp SCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCS
T ss_pred CCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCcccc
Confidence 11111 333333222 37899999999887544333210000 000012
Q ss_pred EEEEeecCCEEEEeeCCCc-------------------EEEEECCCCceeEEecC--CC-------CCeE--EEEEeCC-
Q 009274 345 IHALTTSGRYLYTGSGDRT-------------------IKAWSLLDGTLSCTMSG--HK-------SAVS--TLAVCNG- 393 (538)
Q Consensus 345 ~~~~~~~~~~l~sg~~dg~-------------------i~iwd~~~~~~~~~~~~--h~-------~~v~--~l~~~~~- 393 (538)
..++.++.+.++.++.++. |..+|..+|+.++.+.. |. .+.. .+.+.+.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 3467777888998888764 99999999999998754 21 1111 2222232
Q ss_pred --EEEEEecCCcEEEEECCCCceeEEEecCCCCce-------------------------------------EEEEEEcC
Q 009274 394 --VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAV-------------------------------------SSVLSLTA 434 (538)
Q Consensus 394 --~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~ 434 (538)
.++.++.+|.++++|.++|+.+........... ...++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 788999999999999999998755432210000 00147788
Q ss_pred CCCEEEEEeC---------------------------------------------CCcEEEEeCC--cceeeeccccceE
Q 009274 435 VQHTLVVSHE---------------------------------------------SGSIKVWRND--KFMKSMQTHKGSV 467 (538)
Q Consensus 435 ~~~~l~~~~~---------------------------------------------dg~i~iwd~~--~~~~~~~~h~~~v 467 (538)
+..++++... +|.|+.||.. +.+..+..+....
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 8888877632 3678899954 3444444333221
Q ss_pred E-EEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCC
Q 009274 468 F-AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG 504 (538)
Q Consensus 468 ~-~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~ 504 (538)
. .+...+.+++.|+.||.++.||.++++.........
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 1 344578899999999999999999999887766543
No 371
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.28 E-value=7.2e-13 Score=127.45 Aligned_cols=117 Identities=15% Similarity=0.207 Sum_probs=75.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++....... .....||+.|||||++... ....++.++|||||||+||+|++|+ |
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------------~~~~~~~~~Di~slG~il~~l~~g~~p 218 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSV------------GTAGYNRAVDCWSLGVILFICLSGYPP 218 (322)
T ss_dssp CCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHT------------TTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred CeEEEccCccceecccccc---cccccCCcCccCchhhccC------------CCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 357888 56666654422 4568899999999998221 1245778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ... ........ +.. .......+.+++.+||..+|.+||++.++.+
T Consensus 219 f~~~~~~~~~~~~~---------~~~~~~~~----~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 219 FSEHRTQVSLKDQI---------TSGKYNFI----PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCSTTCSSCHHHHH---------HHTCCCCC----HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccchHHHHHHHH---------HhCccccC----chh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 9765332100 000 00000000 000 0112234788999999999999999887654
No 372
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.28 E-value=2.2e-12 Score=125.30 Aligned_cols=125 Identities=19% Similarity=0.184 Sum_probs=76.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... ..+..+||+.|||||++ .+ ...++.++|||||||+||+|++|. |
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~~ 212 (346)
T 1ua2_A 149 GVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELL------FG--------ARMYGVGVDMWAVGCILAELLLRVPF 212 (346)
T ss_dssp CCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHH------TT--------CSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEecccceeccCCcc--cCCcccccccccCchHh------hC--------CCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 467888 56666654332 24568999999999998 33 234778999999999999999999 8
Q ss_pred cchhhhhhee-e-cc---cccc--Ccch-------hhc-chhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCc
Q 009274 89 FTKELIDYIR-C-VS---TKAS--DDNI-------ACL-GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (538)
Q Consensus 89 f~~~~~~~~~-~-~~---~~~~--~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~ 153 (538)
|.+....... . +. .... +... ... .+...+.. ........+.+++.+||..+|.+||
T Consensus 213 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rp 284 (346)
T 1ua2_A 213 LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH--------IFSAAGDDLLDLIQGLFLFNPCARI 284 (346)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHH--------HCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred CCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHH--------hhccCCHHHHHHHHHHhccChhhCC
Confidence 8765433111 0 00 0000 0000 000 00000000 0011123478899999999999999
Q ss_pred chhhHHH
Q 009274 154 LLTNVWK 160 (538)
Q Consensus 154 ~~~~~~~ 160 (538)
++.++.+
T Consensus 285 t~~ell~ 291 (346)
T 1ua2_A 285 TATQALK 291 (346)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9888765
No 373
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.28 E-value=7.7e-13 Score=128.13 Aligned_cols=120 Identities=17% Similarity=0.236 Sum_probs=62.3
Q ss_pred eeeeec--cccccccccchhh----------hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhh
Q 009274 12 SVAKVG--CVGSRICDKEVGL----------FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACI 79 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~ 79 (538)
+.+|+. |+++......... ......||+.|||||++ .+ .....+++++|||||||+
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~------~~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII------DL------YSNFPIGEKQDIWALGCI 242 (337)
T ss_dssp SCEEBCCCTTCBCCSSCC-------------------------------------C------CTTSCSSHHHHHHHHHHH
T ss_pred CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhh------hc------cccCCCChHHhHHHHHHH
Confidence 457888 5555554332110 01246799999999998 21 123567789999999999
Q ss_pred hhhhhhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 80 LLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 80 l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
||+|+||+ ||.......+.... .. ..........+.+++.+||+.+|.+||++.++
T Consensus 243 l~el~~g~~p~~~~~~~~~~~~~----------~~-------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKLRIVNGK----------YS-------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp HHHHHHSSCCC----------------------CC-------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHhCCCCCcchhHHHhhcCc----------cc-------------CCcccccchHHHHHHHHHccCChhhCcCHHHH
Confidence 99999999 99865433211000 00 00011122347789999999999999999999
Q ss_pred HHHHHHhh
Q 009274 159 WKCIRELI 166 (538)
Q Consensus 159 ~~~l~~l~ 166 (538)
.+.+..+.
T Consensus 300 l~~l~~~~ 307 (337)
T 3ll6_A 300 VHQLQEIA 307 (337)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887765
No 374
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.28 E-value=1.3e-12 Score=123.75 Aligned_cols=120 Identities=13% Similarity=0.171 Sum_probs=78.1
Q ss_pred eeeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 11 KSVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
++..|+. |+++......... ......||+.|+|||++ .+ ..+++++||||||+++|+|+| |
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~g 217 (291)
T 1xbb_A 153 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI------NY---------YKFSSKSDVWSFGVLMWEAFSYG 217 (291)
T ss_dssp TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTT
T ss_pred CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh------cc---------CCCChhhhHHHHHHHHHHHHhcC
Confidence 3457888 5566554432211 12235678999999998 22 456789999999999999999 9
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
+ ||.......+. .+.. .. .+ .........+.+++.+||+.+|.+||++.++.+.+..
T Consensus 218 ~~p~~~~~~~~~~~~~~~-~~--------~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 218 QKPYRGMKGSEVTAMLEK-GE--------RM------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp CCSSTTCCHHHHHHHHHT-TC--------CC------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHc-CC--------CC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 9 99875443111 0000 00 00 0001112247889999999999999999999998888
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
+.
T Consensus 277 ~~ 278 (291)
T 1xbb_A 277 YY 278 (291)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 375
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.28 E-value=2.8e-12 Score=125.84 Aligned_cols=129 Identities=14% Similarity=0.170 Sum_probs=72.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++..... ....+||+.|||||++ .+ ...++.++|||||||+||+|++|+ |
T Consensus 181 ~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~p 241 (371)
T 4exu_A 181 CELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI------LS--------WMHYNQTVDIWSVGCIMAEMLTGKTL 241 (371)
T ss_dssp CCEEECSTTCC-------------CTTCCCTTSCHHHH------SC--------CSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEecCcccccccC-----cCCcccCccccCHHHh------cC--------CCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence 457888 566655543 4468999999999998 33 246789999999999999999999 9
Q ss_pred cchhhhhhee-e-ccccccC-cchhhcchh-hHHHHHHHHHHH-------hhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIR-C-VSTKASD-DNIACLGMY-MAWMEKVTYLLE-------NKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~-~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.+....... . +...... ..+ ..... ..........+. .........+.+++.+||..+|.+||++.+
T Consensus 242 f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 320 (371)
T 4exu_A 242 FKGKDYLDQLTQILKVTGVPGTEF-VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 320 (371)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCHHH-HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred CCCCChHHHHHHHHHHhCCCcHHH-HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHH
Confidence 9875433111 0 0000000 000 00000 000000000000 000112345889999999999999999887
Q ss_pred HHH
Q 009274 158 VWK 160 (538)
Q Consensus 158 ~~~ 160 (538)
+.+
T Consensus 321 ll~ 323 (371)
T 4exu_A 321 ALT 323 (371)
T ss_dssp HHT
T ss_pred Hhc
Confidence 654
No 376
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.28 E-value=1.8e-12 Score=126.36 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=51.0
Q ss_pred eeeeec--cccccccccc--hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKE--VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
+.+|+. |+++.+.... ........+||+.|||||++ .| ...+++++|||||||++|+|+||+
T Consensus 161 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~ 226 (351)
T 3mi9_A 161 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL------LG--------ERDYGPPIDLWGAGCIMAEMWTRS 226 (351)
T ss_dssp SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCEEEccchhcccccccccccccccCCcccccCccCchhh------cC--------CCCCCcHhHHHHHHHHHHHHHhCC
Confidence 467888 5566554221 11124468999999999998 33 244789999999999999999999
Q ss_pred -ccchhhhh
Q 009274 88 -QFTKELID 95 (538)
Q Consensus 88 -pf~~~~~~ 95 (538)
||.+....
T Consensus 227 ~pf~~~~~~ 235 (351)
T 3mi9_A 227 PIMQGNTEQ 235 (351)
T ss_dssp CSCCCSSHH
T ss_pred CCCCCCChH
Confidence 99875433
No 377
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.28 E-value=1.2e-12 Score=123.79 Aligned_cols=118 Identities=13% Similarity=0.181 Sum_probs=80.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+.+|+. |+++........ ......||+.|+|||++ .+ ..+++++||||||+++|+|++ |.
T Consensus 148 ~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~ll~~g~~ 211 (288)
T 3kfa_A 148 HLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESL------AY---------NKFSIKSDVWAFGVLLWEIATYGMS 211 (288)
T ss_dssp GCEEECCCCGGGTSCSSSSE-EETTEEECGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEccCccceeccCCccc-cccCCccccCcCChhhh------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457887 556665544321 24457889999999998 32 457789999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.......+... ......... ......+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 212 p~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 212 PYPGIDLSQVYEL---------------------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp SSTTCCGGGHHHH---------------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHH---------------------HhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 9987544311100 000000000 111223788999999999999999999988887765
No 378
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.28 E-value=2e-12 Score=126.45 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=67.7
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++..... .+..+||+.|||||++ .+ ...++.++|||||||+||+|++|+ |
T Consensus 169 ~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~p 229 (367)
T 2fst_X 169 CELKILDFGLARHTADE-----MTGYVATRWYRAPEIM------LN--------WMHYNQTVDIWSVGCIMAELLTGRTL 229 (367)
T ss_dssp CCEEECC--------------------CCCTTCCHHHH------TT--------CCSCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeecccccccccc-----CCCcCcCcCccChHHH------cC--------CcCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 566665543 4568999999999998 33 246789999999999999999999 9
Q ss_pred cchhhhhhee-e-ccccccCcchhhcch-hhHHHHHHHHHH-------HhhhcCccchHHHHHhhhhccCCCCCcchhhH
Q 009274 89 FTKELIDYIR-C-VSTKASDDNIACLGM-YMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (538)
Q Consensus 89 f~~~~~~~~~-~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~ 158 (538)
|.+....... . +........-..... ....+......+ ..........+.+++.+||..+|.+||++.++
T Consensus 230 f~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~ 309 (367)
T 2fst_X 230 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309 (367)
T ss_dssp CCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH
Confidence 9875433111 0 000000000000000 000000000000 00001122347889999999999999998876
Q ss_pred HH
Q 009274 159 WK 160 (538)
Q Consensus 159 ~~ 160 (538)
.+
T Consensus 310 L~ 311 (367)
T 2fst_X 310 LA 311 (367)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 379
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.28 E-value=2.1e-12 Score=122.55 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=77.5
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
.-+|+. |+++.+...... .......||+.|||||++ .+ ..+++++||||||+++|+|+||.
T Consensus 151 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~g~~ 215 (295)
T 3ugc_A 151 NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL------TE---------SKFSVASDVWSFGVVLYELFTYIE 215 (295)
T ss_dssp TEEEECCCCSCC-------------CTTCGGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh------cC---------CCCChHHHHHHHHHHHHHHHhccc
Confidence 457888 666666543321 112346788999999998 32 45778999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh----h-cCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK----F-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||.............. ................. . ......+.+++.+||+.+|.+||++.++.+.+
T Consensus 216 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L 286 (295)
T 3ugc_A 216 KSKSPPAEFMRMIGND---------KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286 (295)
T ss_dssp TTCSHHHHHHHHHCTT---------CCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ccCCChHHHHhhhcCc---------cccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 8876533311100000 00000000111111111 1 11223488999999999999999999999888
Q ss_pred HHhh
Q 009274 163 RELI 166 (538)
Q Consensus 163 ~~l~ 166 (538)
.++.
T Consensus 287 ~~l~ 290 (295)
T 3ugc_A 287 DQIR 290 (295)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 380
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.27 E-value=3.7e-13 Score=128.37 Aligned_cols=112 Identities=18% Similarity=0.179 Sum_probs=74.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++...... .....||+.|||||++ .+ ..+++++|||||||++|+|++|+ |
T Consensus 146 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 206 (304)
T 2jam_A 146 SKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVL------AQ---------KPYSKAVDCWSIGVITYILLCGYPP 206 (304)
T ss_dssp CCEEBCSCSTTCCCCCBT----THHHHSCCCBCCTTTB------SS---------CSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEccCCcceecCCCc----cccccCCCCccChHHh------cc---------CCCCchhhHHHHHHHHHHHHHCCCC
Confidence 457888 4555444332 4467899999999998 43 56788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+.. . ..... ..........+.+++.+||..+|.+||++.++.+
T Consensus 207 f~~~~~~~~~~~i~~--~-----~~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 207 FYEETESKLFEKIKE--G-----YYEFE-----------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTSCHHHHHHHHHH--C-----CCCCC-----------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHc--C-----CCCCC-----------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 9775433111 0000 0 00000 0000111234788999999999999999887765
No 381
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.27 E-value=2.3e-12 Score=124.49 Aligned_cols=126 Identities=18% Similarity=0.294 Sum_probs=71.6
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... ......||+.|||||++ .+ ...++.++|||||||++|+|++|+ |
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~p 224 (331)
T 4aaa_A 161 GVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELL------VG--------DVKYGKAVDVWAIGCLVTEMFMGEPL 224 (331)
T ss_dssp SCEEECCCTTC--------------CCCCCTTCCHHHH------TT--------CTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEEeCCCceeecCCcc--ccCCCcCCccccCcccc------cC--------CCCcchHHHHHHHHHHHHHHHhCCCC
Confidence 467888 55665554322 24568999999999998 33 235788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHH----------------HhhhcCccchHHHHHhhhhccCCCC
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLL----------------ENKFGSEFVSLQLMFCQCLNFDPGC 151 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~l~~~p~~ 151 (538)
|......... .+... .....+.........+ ....+.....+.+++.+||..+|.+
T Consensus 225 f~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 297 (331)
T 4aaa_A 225 FPGDSDIDQLYHIMMC-------LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297 (331)
T ss_dssp CCCSSHHHHHHHHHHH-------HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCcHHHHHHHHHH-------hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence 9875433111 00000 0000000000000000 0000112234788999999999999
Q ss_pred CcchhhHHH
Q 009274 152 RPLLTNVWK 160 (538)
Q Consensus 152 r~~~~~~~~ 160 (538)
||++.++.+
T Consensus 298 Rpt~~ell~ 306 (331)
T 4aaa_A 298 RPFCAELLH 306 (331)
T ss_dssp SCCGGGGGG
T ss_pred CCCHHHHhc
Confidence 999988765
No 382
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.27 E-value=1.6e-12 Score=127.31 Aligned_cols=120 Identities=17% Similarity=0.173 Sum_probs=70.5
Q ss_pred eeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 12 SVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
..+|+. |+++.+.+..... ......||+.|||||++ .+ ..+++++|||||||+||||+| |
T Consensus 229 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwSlG~il~ellt~~ 293 (373)
T 3c1x_A 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL------QT---------QKFTTKSDVWSFGVLLWELMTRG 293 (373)
T ss_dssp CCEEECCC---------------------CCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEeeccccccccccccccccccCCCCCcccccChHHh------cC---------CCCCcHHHHHHHHHHHHHHHhCc
Confidence 467888 6677665443211 12357789999999998 22 557789999999999999999 5
Q ss_pred C-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
. ||.......+.....+.. ... ........+.+++.+||..+|.+||+..++.+.+..+
T Consensus 294 ~~p~~~~~~~~~~~~~~~~~-------~~~-------------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 294 APPYPDVNTFDITVYLLQGR-------RLL-------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp CCSCTTSCSSCHHHHHHTTC-------CCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCC-------CCC-------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 5 787643321110000000 000 0011122478899999999999999999999988887
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 354 ~ 354 (373)
T 3c1x_A 354 F 354 (373)
T ss_dssp H
T ss_pred H
Confidence 6
No 383
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.27 E-value=1.4e-12 Score=131.34 Aligned_cols=119 Identities=21% Similarity=0.212 Sum_probs=75.0
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.+.... ......||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 316 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDvwslG~~l~el~t~g~ 379 (452)
T 1fmk_A 316 NLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAA------LY---------GRFTIKSDVWSFGILLTELTTKGR 379 (452)
T ss_dssp GGCEEECCCCTTC---------------CCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEECCCccceecCCCcee-cccCCcccccccCHhHH------hc---------CCCCccccHHhHHHHHHHHHhCCC
Confidence 3468898 677776644322 13357789999999998 22 567899999999999999999 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+. .+. . . ..++ ........+.+++.+||..+|.+||+..++.+.+..+
T Consensus 380 ~P~~~~~~~~~~~~i~-~-~------~~~~-------------~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 380 VPYPGMVNREVLDQVE-R-G------YRMP-------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp CSSTTCCHHHHHHHHH-T-T------CCCC-------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHH-c-C------CCCC-------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99875433111 000 0 0 0000 0011122378899999999999999999999888876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 439 ~ 439 (452)
T 1fmk_A 439 F 439 (452)
T ss_dssp T
T ss_pred h
Confidence 5
No 384
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.27 E-value=1e-12 Score=126.69 Aligned_cols=118 Identities=15% Similarity=0.088 Sum_probs=77.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++....... .....||+.|+|||++ .+ ..+++++|||||||++|+|+| |+
T Consensus 179 ~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ellt~g~~ 240 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESL------NY---------SVYTTNSDVWSYGVLLWEIVSLGGT 240 (327)
T ss_dssp GCEEECCTTCEESSCEECC---C----CCTTTCCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred CeEEEcccCcCcccccccc---ccCCCCCccccChhhh------cc---------ccCCchhcchHHHHHHHHHHcCCCC
Confidence 467888 45554332221 2346789999999998 22 456789999999999999998 99
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+.. .. ... ........+.+++.+||..+|.+||++.++.+.+.+++
T Consensus 241 pf~~~~~~~~~~~~~~-~~-----~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 241 PYCGMTCAELYEKLPQ-GY-----RLE---------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp TTTTCCHHHHHHHGGG-TC-----CCC---------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhhc-CC-----CCC---------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99875444211 0000 00 000 00011224778999999999999999999999988876
Q ss_pred cC
Q 009274 167 IK 168 (538)
Q Consensus 167 ~~ 168 (538)
..
T Consensus 300 ~~ 301 (327)
T 1fvr_A 300 EE 301 (327)
T ss_dssp HS
T ss_pred Hh
Confidence 43
No 385
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.27 E-value=1.1e-12 Score=126.73 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=72.9
Q ss_pred eeeeeec--cccccccccchh----------hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhh
Q 009274 11 KSVAKVG--CVGSRICDKEVG----------LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~ 78 (538)
++.+|+. |+++.+...... ......+||+.|||||++ .+ ..+++++|||||||
T Consensus 200 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~ 264 (332)
T 3qd2_B 200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI------HG---------NNYSHKVDIFSLGL 264 (332)
T ss_dssp TCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHH------HC---------CCCCTHHHHHHHHH
T ss_pred CCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHh------cC---------CCCcchhhHHHHHH
Confidence 3568888 666666554211 113457899999999999 44 56789999999999
Q ss_pred hhhhhhhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 79 ILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 79 ~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
++|+|++|. |+........... ....+... .... +.+.+++.+||+.+|.+||++.+
T Consensus 265 il~el~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~--------~~~~~li~~~l~~~p~~Rps~~~ 322 (332)
T 3qd2_B 265 ILFELLYSFSTQMERVRIITDVR----------NLKFPLLF----TQKY--------PQEHMMVQDMLSPSPTERPEATD 322 (332)
T ss_dssp HHHHHHSCCCCHHHHHHHHHHHH----------TTCCCHHH----HHHC--------HHHHHHHHHHHCSSGGGSCCHHH
T ss_pred HHHHHHHcCCChhHHHHHHHHhh----------ccCCCccc----ccCC--------hhHHHHHHHHccCCCCcCCCHHH
Confidence 999999999 7765422210000 00111111 1111 12567999999999999999887
Q ss_pred HHH
Q 009274 158 VWK 160 (538)
Q Consensus 158 ~~~ 160 (538)
+.+
T Consensus 323 ~l~ 325 (332)
T 3qd2_B 323 IIE 325 (332)
T ss_dssp HHH
T ss_pred Hhh
Confidence 765
No 386
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.27 E-value=2.8e-12 Score=122.63 Aligned_cols=127 Identities=20% Similarity=0.255 Sum_probs=69.8
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++..|+. |+++.+..... ......||+.|||||++ .+ ...+++++|||||||++|+|++|+
T Consensus 138 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~ 201 (311)
T 4agu_A 138 HSVIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELL------VG--------DTQYGPPVDVWAIGCVFAELLSGVP 201 (311)
T ss_dssp TSCEEECCCTTCEECC--------------GGGCCHHHH------HT--------CSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEeeCCCchhccCccc--ccCCCcCCccccChHHH------hc--------CCCCCcchhhHHHHHHHHHHHhCCC
Confidence 3567888 55665553322 24568999999999998 32 245788999999999999999999
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHH----------------HHhhhcCccchHHHHHhhhhccCCC
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYL----------------LENKFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
||.+....... .+... .....+......... .....+.....+.+++.+||..+|.
T Consensus 202 p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 274 (311)
T 4agu_A 202 LWPGKSDVDQLYLIRKT-------LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT 274 (311)
T ss_dssp SCCCSSHHHHHHHHHHH-------HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTT
T ss_pred CCCCCCHHHHHHHHHHH-------hcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChh
Confidence 99875433111 00000 000000000000000 0000012223477899999999999
Q ss_pred CCcchhhHHH
Q 009274 151 CRPLLTNVWK 160 (538)
Q Consensus 151 ~r~~~~~~~~ 160 (538)
+||++.++.+
T Consensus 275 ~Rpt~~ell~ 284 (311)
T 4agu_A 275 ERLTCEQLLH 284 (311)
T ss_dssp TSCCHHHHHT
T ss_pred hcCCHHHHhc
Confidence 9999887664
No 387
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.27 E-value=1.5e-12 Score=124.04 Aligned_cols=112 Identities=18% Similarity=0.286 Sum_probs=75.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++.+...... .....||+.|+|||++ .+ ..+++++||||||++||+|++|+ |
T Consensus 156 ~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 218 (303)
T 3a7i_A 156 GEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVI------KQ---------SAYDSKADIWSLGITAIELARGEPP 218 (303)
T ss_dssp SCEEECCCTTCEECBTTBCC--BCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeecccceecCccccc--cCccCCCcCccCHHHH------hc---------CCCCchhhhHHHHHHHHHHccCCCC
Confidence 457888 556665544322 4468899999999999 43 56778999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|......... ..+......... .....+.+++.+||..+|.+||++.++.+.
T Consensus 219 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 219 HSELHPMKVL---------------------FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp TTTSCHHHHH---------------------HHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCCcCHHHHH---------------------HHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 9765333111 000000000011 112247889999999999999998887653
No 388
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.26 E-value=1.2e-12 Score=123.10 Aligned_cols=115 Identities=16% Similarity=0.224 Sum_probs=72.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++..... .....||+.|+|||++ .+ ..+++++||||||+++|+|+| |+
T Consensus 153 ~~~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~t~g~ 212 (278)
T 1byg_A 153 DNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL------RE---------KKFSTKSDVWSFGILLWEIYSFGR 212 (278)
T ss_dssp TSCEEECCCCC-----------------CCTTTSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEeecccccccccc-----ccCCCccccccCHHHh------CC---------CCCCchhcHHHHHHHHHHHHhCCC
Confidence 3467888 455555433 2346789999999998 22 457789999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+.. . .. + .........+.+++.+||..+|.+||++.++.+.+.++
T Consensus 213 ~p~~~~~~~~~~~~~~~--~------~~-~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 213 VPYPRIPLKDVVPRVEK--G------YK-M------------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp CSCTTSCGGGHHHHHTT--T------CC-C------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhc--C------CC-C------------CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 99865333111 0000 0 00 0 00011123478899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 272 ~ 272 (278)
T 1byg_A 272 K 272 (278)
T ss_dssp H
T ss_pred H
Confidence 4
No 389
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.26 E-value=5.2e-09 Score=97.71 Aligned_cols=209 Identities=9% Similarity=-0.013 Sum_probs=142.1
Q ss_pred ccCcceeEEeecCCeEEEEEeecCC-CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCC-cCeEEEEEecC
Q 009274 228 AGGVKDLVNGLSKGNVKFKDLQGHR-DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDE 303 (538)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~l~~h~-~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~ 303 (538)
...+..+.....+....+|.+..|. ..+.++++. |++++ +.++.|..||. +++.+..+..+. ..+.++.+.++
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~d 87 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPD 87 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTT
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCC
Confidence 3344555555553555679988876 578888887 77777 45788999999 899999998753 57888899886
Q ss_pred CCCEEEEEcC-CCcEEEEEccCCCCCcceeeeccc-CCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 009274 304 DQPLCISGDS-GGGIFVWSFSFPLGHEPLKKWNEE-KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (538)
Q Consensus 304 ~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h 381 (538)
+. ++++.+. ++.+..+|. +++........... .........++.++|+++++...++.|..||.. |+.++++..+
T Consensus 88 G~-~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~ 164 (276)
T 3no2_A 88 GN-ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS 164 (276)
T ss_dssp SC-EEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS
T ss_pred CC-EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC
Confidence 55 5555554 667776664 23222222111110 000011123567889999999999999999987 9999998765
Q ss_pred CCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCC----CceEEEEEEcCCCCEEEEEe
Q 009274 382 KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS----GAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 382 ~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~ 443 (538)
. ...++... ++.+++++.++.|..+|..+++.+.++..... -.........++|+++++.+
T Consensus 165 ~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 165 G-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp S-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred C-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 3 34455555 55788888888999999999999998864321 12233457778888887764
No 390
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.26 E-value=1.6e-12 Score=122.56 Aligned_cols=108 Identities=16% Similarity=0.204 Sum_probs=73.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ ++....... .....||+.|||||++ .+ ..+++++||||||+++|+|++|. |
T Consensus 151 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 211 (284)
T 2vgo_A 151 GELKIADFGWSVHAPSLR----RRTMCGTLDYLPPEMI------EG---------KTHDEKVDLWCAGVLCYEFLVGMPP 211 (284)
T ss_dssp CCEEECCCTTCEECSSSC----BCCCCSCGGGCCHHHH------TT---------CCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEecccccccCcccc----cccccCCCCcCCHHHh------cc---------CCCCcccchhhHHHHHHHHHHCCCC
Confidence 4578884 454444332 3468899999999999 44 56788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-cCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......... .+... .... ......+.+++.+||..+|.+||++.++.+
T Consensus 212 f~~~~~~~~~~---------------------~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 212 FDSPSHTETHR---------------------RIVNV-DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp TCCSSHHHHHH---------------------HHHTT-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCHhHHHH---------------------HHhcc-ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 98653331110 00000 0000 011123778999999999999999988765
No 391
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.26 E-value=4.1e-12 Score=122.40 Aligned_cols=130 Identities=17% Similarity=0.167 Sum_probs=75.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++...... ......||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 157 ~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 218 (326)
T 1blx_A 157 GQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVL------LQ---------SSYATPVDLWSVGCIFAEMFRRKPL 218 (326)
T ss_dssp CCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEecCcccccccCCC---CccccccccceeCHHHH------hc---------CCCCcchhHHHHHHHHHHHHcCCCC
Confidence 457888 5566655432 24568999999999999 43 56789999999999999999999 9
Q ss_pred cchhhhhhee-ec----cccccCcchh-hcchhh-HHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CV----STKASDDNIA-CLGMYM-AWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~----~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.+....... .+ ....... .. ....+. ....................+.+++.+||..+|.+||++.++.+
T Consensus 219 f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 219 FRGSSDVDQLGKILDVIGLPGEED-WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCGGG-SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHHcCCCCccc-CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 9875333111 00 0000000 00 000000 00000000000000111223678999999999999999887654
No 392
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.26 E-value=8.1e-13 Score=126.84 Aligned_cols=130 Identities=18% Similarity=0.271 Sum_probs=80.4
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..|+. |+++........ .......||+.|||||++ .+ ..++.++||||||+++|+|+||.
T Consensus 171 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~ll~g~~ 235 (318)
T 3lxp_A 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL------KE---------YKFYYASDVWSFGVTLYELLTHCD 235 (318)
T ss_dssp CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred CCEEECCccccccccccccccccccCCCCCceeeChHHh------cC---------CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 457888 556665543221 123457899999999999 32 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-----cCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-----GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||............ ....... ............ ......+.+++.+||+.+|.+||++.++.+.+
T Consensus 236 p~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 305 (318)
T 3lxp_A 236 SSQSPPTKFLELIG---------IAQGQMT-VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305 (318)
T ss_dssp GGGSHHHHHHHHHC---------SCCHHHH-HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccccchhhhhhhc---------ccccchh-HHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 99865433111000 0000000 001111111111 11223488999999999999999999998887
Q ss_pred HHhh
Q 009274 163 RELI 166 (538)
Q Consensus 163 ~~l~ 166 (538)
..+.
T Consensus 306 ~~l~ 309 (318)
T 3lxp_A 306 KTVH 309 (318)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 393
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.26 E-value=1.6e-12 Score=130.86 Aligned_cols=115 Identities=17% Similarity=0.246 Sum_probs=77.7
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++..... .....+|+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 325 ~~~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~------~~---------~~~~~~sDvwslG~~l~el~t~g~ 384 (450)
T 1k9a_A 325 DNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL------RE---------KKFSTKSDVWSFGILLWEIYSFGR 384 (450)
T ss_dssp TSCEEECCCTTCEECC-----------CCCTTTSCHHHH------HS---------SCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEeeCCCccccccc-----ccCCCCCcceeCHHHh------cC---------CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 3568998 666655433 2245789999999999 33 567899999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+. +. ..+ .........+.+++.+||..+|.+||+..++.+.+..+
T Consensus 385 ~P~~~~~~~~~~~~i~-~~-------~~~-------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 385 VPYPRIPLKDVVPRVE-KG-------YKM-------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp CSSTTSCTTTHHHHHH-TT-------CCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH-cC-------CCC-------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99875433111 000 00 000 00011223478899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 444 ~ 444 (450)
T 1k9a_A 444 R 444 (450)
T ss_dssp H
T ss_pred H
Confidence 4
No 394
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.26 E-value=3.4e-12 Score=124.92 Aligned_cols=134 Identities=16% Similarity=0.207 Sum_probs=76.1
Q ss_pred eeeeec--cccccccccch-hhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+-.|+. |+++....... ....+..+||+.|||||++ .+ ...++.++|||||||+||+|++|+
T Consensus 165 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~ 230 (364)
T 3qyz_A 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM------LN--------SKGYTKSIDIWSVGCILAEMLSNRP 230 (364)
T ss_dssp CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH------HT--------BCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh------cC--------CCCCCcchhHHHHHHHHHHHHHCCC
Confidence 357888 56665554322 1123567999999999997 22 234788999999999999999999
Q ss_pred ccchhhhhhee-ecc-ccccC--cchhhcchhhHHHHHHHHHH-------HhhhcCccchHHHHHhhhhccCCCCCcchh
Q 009274 88 QFTKELIDYIR-CVS-TKASD--DNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (538)
Q Consensus 88 pf~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~ 156 (538)
||.+....... .+. ..... ..+..... ..........+ ..........+.+++.+||..+|.+||++.
T Consensus 231 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 309 (364)
T 3qyz_A 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIIN-LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309 (364)
T ss_dssp SSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC-HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhhh-hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 99875433111 000 00000 00000000 00000000000 000011223478899999999999999988
Q ss_pred hHHH
Q 009274 157 NVWK 160 (538)
Q Consensus 157 ~~~~ 160 (538)
++.+
T Consensus 310 e~l~ 313 (364)
T 3qyz_A 310 QALA 313 (364)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 7765
No 395
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.26 E-value=8.4e-13 Score=125.50 Aligned_cols=119 Identities=13% Similarity=0.170 Sum_probs=76.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++.+..... .....||+.|+|||++...... ....++.++||||||+++|+|++|+ |
T Consensus 161 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~---------~~~~~~~~~Di~slG~~l~~l~~g~~p 228 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMND---------NHPGYGKEVDMWSTGVIMYTLLAGSPP 228 (298)
T ss_dssp CCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCT---------TSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEecccchhhcCCCcc---cccccCCccccCHHHhcccccc---------ccccCCcccccHhHHHHHHHHHHCCCC
Confidence 357888 45565554332 4568899999999998444322 1245788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|.......+. .+.. .. .....+ ........+.+++.+||..+|.+||++.++.+
T Consensus 229 ~~~~~~~~~~~~~~~-~~-----~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 229 FWHRKQMLMLRMIMS-GN-----YQFGSP------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp SCCSSHHHHHHHHHH-TC-----CCCCTT------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcCccHHHHHHHHhc-CC-----cccCcc------------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 9765333111 0000 00 000000 00011223778999999999999999887654
No 396
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.26 E-value=9.8e-13 Score=127.72 Aligned_cols=132 Identities=11% Similarity=0.161 Sum_probs=78.7
Q ss_pred eeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc-
Q 009274 12 SVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG- 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg- 86 (538)
+.+|+. |+++......... ......||+.|||||++ .+. .......++.++|||||||+||+|+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~---~~~~~~~~~~~~Di~slG~il~el~tg~ 254 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------DDS---INMKHFESFKRADIYAMGLVFWEIARRC 254 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH------TSC---CCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhh------ccc---ccccccccCCcccHHHHHHHHHHHHhcc
Confidence 457888 5666655443211 13457899999999999 330 000012445789999999999999999
Q ss_pred ---------C-ccchhhhhh-----ee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCC
Q 009274 87 ---------E-QFTKELIDY-----IR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 87 ---------~-pf~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (538)
+ ||....... +. .+..... ....+..+. ....+ ..+.+++.+||..+|.
T Consensus 255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~--------~~l~~li~~cl~~dp~ 319 (342)
T 1b6c_B 255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL-----RPNIPNRWQ--SCEAL--------RVMAKIMRECWYANGA 319 (342)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC-----CCCCCGGGG--TSHHH--------HHHHHHHHHHCCSSGG
T ss_pred CcCCcccccccCccccCcCcccHHHHHHHHHHHHh-----CCCCccccc--chhHH--------HHHHHHHHHHhccChh
Confidence 6 776532210 00 0000000 000000000 00011 1277899999999999
Q ss_pred CCcchhhHHHHHHHhhc
Q 009274 151 CRPLLTNVWKCIRELII 167 (538)
Q Consensus 151 ~r~~~~~~~~~l~~l~~ 167 (538)
+||++.++.+.+.++..
T Consensus 320 ~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 320 ARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp GSCCHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHH
Confidence 99999999999888763
No 397
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.26 E-value=2e-13 Score=133.76 Aligned_cols=256 Identities=19% Similarity=0.121 Sum_probs=136.4
Q ss_pred EEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccC
Q 009274 259 AVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEK 338 (538)
Q Consensus 259 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 338 (538)
+..++.+++++.||.|+.||..+|+.++.++. +.+.+..+..+ +.++++++.||.|+.||..+++............
T Consensus 6 ~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 6 TLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp --CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 34588999999999999999999999999886 44544444443 4466778899999999998776543222110000
Q ss_pred CceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEE
Q 009274 339 DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVL 418 (538)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 418 (538)
..... .+ .++..+++|+.|+.|+.||..+|+.++.+..+.. +. .+-.++.+++++.|+.|+.||.++++.+..+
T Consensus 83 -~~~sp--~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~~-~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 83 -VQASP--CR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-DS-LSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp -HTTCS--CC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred -cccCc--eE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-cc-ccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 00000 11 1355788889999999999999999988865542 11 1114678999999999999999999987766
Q ss_pred ecCCCCceEEEEEEcCCC---CEEEEEeCCCcEEEEeCC--cceeeeccccceEEEE-Ee--CCCEE----EEEeCCCeE
Q 009274 419 EEDSSGAVSSVLSLTAVQ---HTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAV-FL--EGKWL----FTGGWDKTV 486 (538)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~iwd~~--~~~~~~~~h~~~v~~~-~~--~~~~l----~sgs~dg~v 486 (538)
.... .....+..+. ..+++++.||.++.||.. +.+..... ..++..+ .. ++... +.+ ++.+
T Consensus 157 ~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~--~~~l 229 (369)
T 2hz6_A 157 TYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVA--VETL 229 (369)
T ss_dssp EEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEE--HHHH
T ss_pred eccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeec--ccce
Confidence 5321 1112233322 567788999999999954 44444432 3344332 22 33221 111 3456
Q ss_pred EEEecCCCe----eEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEc
Q 009274 487 SVQELAGDE----FEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 487 ~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
+.+|..+++ ..+......... .+ ...++.+++++.||.|+.++.
T Consensus 230 ~~ld~~tG~~~~~~~W~~~~~~~~~--sp----~~~~g~lyv~~~~G~l~al~~ 277 (369)
T 2hz6_A 230 RYLTFMSGEVGRITKWKYPFPKETE--AK----SKLTPTLYVGKYSTSLYASPS 277 (369)
T ss_dssp HHHHHHHHHHHHHHTSCCCCCCHHH--HH----HHSEEEECBEECSSCEECCEE
T ss_pred eeeehhcCCcccceeeeeccCcccc--cc----ccccceEEEecccCCEEecCc
Confidence 667765555 333322211110 01 113567888888888887664
No 398
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.26 E-value=1.5e-12 Score=132.61 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=81.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+...... ......||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 354 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDvwSlG~~l~el~t~g~ 417 (495)
T 1opk_A 354 NHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESL------AY---------NKFSIKSDVWAFGVLLWEIATYGM 417 (495)
T ss_dssp GGCEEECCTTCEECCTTCCEE-CCTTCCCCGGGCCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEeecccceeccCCcee-ecCCCcCCcceeCHhHH------hc---------CCCCcHHhHHhHHHHHHHHHhCCC
Confidence 4568898 677766543322 13356788999999998 22 457789999999999999999 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+. ..+....... .......+.+++.+||..+|.+||++.++.+.+..+
T Consensus 418 ~p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 418 SPYPGIDLSQVY---------------------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp CSSTTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99875433111 0000000000 011223477899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 477 ~ 477 (495)
T 1opk_A 477 F 477 (495)
T ss_dssp C
T ss_pred H
Confidence 5
No 399
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.26 E-value=2.3e-12 Score=122.29 Aligned_cols=116 Identities=15% Similarity=0.268 Sum_probs=72.2
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
++.+|+. |+++....... ......||+.|+|||++.... ..++.++||||||+++|+|++|+
T Consensus 159 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-------------~~~~~~~Di~slG~il~~l~~g~~ 223 (295)
T 2clq_A 159 SGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGP-------------RGYGKAADIWSLGCTIIEMATGKP 223 (295)
T ss_dssp TCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGG-------------GGCSHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEeecccccccCCCCC--cccccCCCccccChhhhcCCC-------------CCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3467888 45555543321 144688999999999982211 23678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||......... .. ..... ......+ .....+.+++.+||..+|.+||++.++.+
T Consensus 224 pf~~~~~~~~~------------~~------~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 224 PFYELGEPQAA------------MF------KVGMF-KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTGGGSSHHHH------------HH------HHHHH-CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred CccCCCchhHH------------HH------hhccc-cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 99754222000 00 00000 0000011 11234778999999999999999887654
No 400
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.25 E-value=2.1e-12 Score=129.37 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=70.5
Q ss_pred eeeeec--cccccccccchhh--hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 12 SVAKVG--CVGSRICDKEVGL--FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
..+|+. |+++.+....... .....+||+.|||||++ .+. ........++.++|||||||++|||+| |
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~--~~~~~~~~~~~~~DiwSlG~il~ellt~g 236 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL------EES--NNLQTKRRLTRSIDIFSMGCVFYYILSKG 236 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHH------SCC--CTTSCCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHh------ccc--cccccccCcchhhhhHhHHHHHHHHHhCC
Confidence 468888 6677666543211 13457999999999999 331 001123568899999999999999999 8
Q ss_pred C-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+ ||..........+..... ............+ . .+.+++.+||..+|.+||++.++.+
T Consensus 237 ~~Pf~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~---~--------~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 237 KHPFGDKYSRESNIIRGIFS-----LDEMKCLHDRSLI---A--------EATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CCTTCSTTTHHHHHHHTCCC-----CCCCTTCCCHHHH---H--------HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCchhhHHHHhcCCCC-----cccccccccccch---H--------HHHHHHHHHhhCChhhCCCHHHHHh
Confidence 8 997643221000000000 0000000000111 1 2678999999999999999887654
No 401
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=6.3e-09 Score=109.90 Aligned_cols=269 Identities=10% Similarity=0.069 Sum_probs=172.2
Q ss_pred ceeEEeecCCeEEEEEeecCCC-----------cEEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecC-C----cCe
Q 009274 232 KDLVNGLSKGNVKFKDLQGHRD-----------CVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH-D----HKV 295 (538)
Q Consensus 232 ~~~~~~~~~~~~~i~~l~~h~~-----------~V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~----~~v 295 (538)
..++.-.......+|.+..... .-..+++.++.++.++.|+.|..+|..+|+.+..+..+ . ..+
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~ 166 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTI 166 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBC
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccc
Confidence 3344444445556788765432 11345566889999999999999999999999998865 2 112
Q ss_pred EE-EEEecCCCCEEEEEcC------CCcEEEEEccCCCCCcceeeecccC---------------------------Cce
Q 009274 296 MA-VVYVDEDQPLCISGDS------GGGIFVWSFSFPLGHEPLKKWNEEK---------------------------DWR 341 (538)
Q Consensus 296 ~~-l~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~---------------------------~~~ 341 (538)
.+ ... . ++ .++.++. +|.|+.+|..+++............ ...
T Consensus 167 ~~~p~v-~-~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~ 243 (677)
T 1kb0_A 167 TGAPRV-F-KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGT 243 (677)
T ss_dssp CSCCEE-E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECC
T ss_pred ccCcEE-E-CC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcc
Confidence 11 111 1 33 3344432 7899999998876544333211110 000
Q ss_pred eeeEEEEeecCCEEEEeeCCC-------------------cEEEEECCCCceeEEecC--CC--------CCe-EEEEEe
Q 009274 342 YSGIHALTTSGRYLYTGSGDR-------------------TIKAWSLLDGTLSCTMSG--HK--------SAV-STLAVC 391 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg~~dg-------------------~i~iwd~~~~~~~~~~~~--h~--------~~v-~~l~~~ 391 (538)
.....+++++++.++.++.++ .|..+|..+|+.++.+.. |. .++ ......
T Consensus 244 ~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 244 MWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp CCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred cccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccC
Confidence 012346777888888887664 599999999999988753 21 111 111222
Q ss_pred C---CEEEEEecCCcEEEEECCCCceeEEEecCCCCc---------eE------------------------EEEEEcCC
Q 009274 392 N---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA---------VS------------------------SVLSLTAV 435 (538)
Q Consensus 392 ~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~------------------------~~~~~~~~ 435 (538)
+ +.++.++.+|.++++|..+|+.+..+....... .. ..++++|+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 3 578999999999999999999987765332110 00 02477888
Q ss_pred CCEEEEEeCC-------------------------------------------CcEEEEeCCc--ceeeeccccceEE--
Q 009274 436 QHTLVVSHES-------------------------------------------GSIKVWRNDK--FMKSMQTHKGSVF-- 468 (538)
Q Consensus 436 ~~~l~~~~~d-------------------------------------------g~i~iwd~~~--~~~~~~~h~~~v~-- 468 (538)
+.++++...+ |.|..||..+ .+..+... .++.
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g 482 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGG 482 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCC
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCc
Confidence 8888876432 6789999654 33333322 2222
Q ss_pred EEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCC
Q 009274 469 AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG 504 (538)
Q Consensus 469 ~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~ 504 (538)
.+..++..++.++.||.+++||..+++.........
T Consensus 483 ~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 483 TLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 244578889999999999999999999887776543
No 402
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.25 E-value=1.1e-12 Score=124.88 Aligned_cols=130 Identities=17% Similarity=0.213 Sum_probs=81.3
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+.+|+. |+++.+...... .......||+.|+|||++ .+ ..++.++|||||||++|+|+||.
T Consensus 163 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~ 227 (302)
T 4e5w_A 163 HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL------MQ---------SKFYIASDVWSFGVTLHELLTYCD 227 (302)
T ss_dssp TEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred CCEEECcccccccccCCCcceeccCCCCCCccccCCeee------cC---------CCCCcchhHHHHHHHHHHHHHccC
Confidence 457888 556655543221 123467899999999998 32 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhh-----cCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF-----GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
|+............ . ....... ........... ......+.+++.+||+.+|.+||++.++.+.+
T Consensus 228 p~~~~~~~~~~~~~---~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 228 SDSSPMALFLKMIG---P------THGQMTV-TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp GGGSHHHHHHHHHC---S------CCGGGHH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CCcchhhHHhhccC---C------cccccCH-HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 87654322111000 0 0000000 11111111111 11223488999999999999999999999988
Q ss_pred HHhh
Q 009274 163 RELI 166 (538)
Q Consensus 163 ~~l~ 166 (538)
..++
T Consensus 298 ~~ll 301 (302)
T 4e5w_A 298 EALL 301 (302)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 403
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.25 E-value=1.8e-12 Score=122.00 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=79.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
+..|+. |+++...+.... ......||+.|+|||++ .+ ..++.++||||||+++|+|++ |+
T Consensus 146 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~g~~ 209 (279)
T 1qpc_A 146 LSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAI------NY---------GTFTIKSDVWSFGILLTEIVTHGRI 209 (279)
T ss_dssp SCEEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHH------HH---------CEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEECCCcccccccCcccc-cccCCCCccCccChhhh------cc---------CCCCchhhhHHHHHHHHHHHhCCCC
Confidence 457888 556665543321 13357789999999998 22 457789999999999999999 88
Q ss_pred ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 88 QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 88 pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
||.+.....+. .+.. . ... .........+.+++.+||..+|.+||+..++.+.+..+.
T Consensus 210 p~~~~~~~~~~~~~~~--~------~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 210 PYPGMTNPEVIQNLER--G------YRM-------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp SSTTCCHHHHHHHHHT--T------CCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHhc--c------cCC-------------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 99875433111 0000 0 000 000011224788999999999999999999998888765
No 404
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.25 E-value=2.4e-12 Score=121.83 Aligned_cols=120 Identities=14% Similarity=0.185 Sum_probs=76.8
Q ss_pred eeeeec--cccccccccchhh-hhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 12 SVAKVG--CVGSRICDKEVGL-FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..|+. |+++.+....... ......||+.|||||++ .+ ..+++++||||||+++|+|++ |+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~g~ 222 (291)
T 1u46_A 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL------KT---------RTFSHASDTWMFGVTLWEMFTYGQ 222 (291)
T ss_dssp TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred CCEEEccccccccccccccchhhhccCCCCceeeCchhh------cC---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 457888 5566654433221 13357889999999998 22 456789999999999999999 99
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+. .+..... . .+ ........+.+++.+||..+|.+||++.++.+.+.++
T Consensus 223 ~p~~~~~~~~~~~~~~~~~~-------~-~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 223 EPWIGLNGSQILHKIDKEGE-------R-LP------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp CTTTTCCHHHHHHHHHTSCC-------C-CC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHccCC-------C-CC------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 99875443111 0000000 0 00 0011122478899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 283 ~ 283 (291)
T 1u46_A 283 Q 283 (291)
T ss_dssp C
T ss_pred C
Confidence 4
No 405
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.25 E-value=1.7e-13 Score=132.14 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=55.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+..... .....||+.|||||++.... ....++.++|||||||++|+|++|+ |
T Consensus 163 ~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-----------~~~~~~~~~Di~slG~il~~l~~g~~p 228 (327)
T 3aln_A 163 GNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSA-----------SRQGYDVRSDVWSLGITLYELATGRFP 228 (327)
T ss_dssp TEEEECCCSSSCC--------------------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEccCCCceecccccc---cccCCCCccccCceeecccc-----------CcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 457888 56666554322 34568999999999982211 1245778999999999999999999 9
Q ss_pred cchhhhh--heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID--YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+..+. ... .+. .+..........+.+++.+||..+|.+||++.++.+
T Consensus 229 f~~~~~~~~~~~~~~-~~~--------~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 229 YPKWNSVFDQLTQVV-KGD--------PPQ--------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SSCC-------CCCC-CSC--------CCC--------CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchHHHHHHHHh-cCC--------CCC--------CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 9864321 111000 000 000 000000111224778999999999999999887654
No 406
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.24 E-value=9.1e-13 Score=124.74 Aligned_cols=110 Identities=12% Similarity=0.102 Sum_probs=71.8
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+.+ ++....... .....||+.|||||++ . +.++.++|||||||++|+|++|+ |
T Consensus 169 ~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~------~----------~~~~~~~Di~slG~~l~~l~~g~~p 228 (290)
T 1t4h_A 169 GSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMY------E----------EKYDESVDVYAFGMCMLEMATSEYP 228 (290)
T ss_dssp SCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGG------G----------TCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeeCCCcccccccc----cccccCCcCcCCHHHH------h----------ccCCCcchHHHHHHHHHHHHhCCCC
Confidence 4678884 454433321 3467899999999987 2 35788999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+.... . ....+. .........+.+++.+||..+|.+||++.++.+
T Consensus 229 f~~~~~~~~~~~~~-~-------~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 229 YSECQNAAQIYRRV-T-------SGVKPA-----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTTCSSHHHHHHHH-T-------TTCCCG-----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCcCcHHHHHHHH-h-------ccCCcc-----------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 9763222 111000 0 000000 000111234788999999999999999887654
No 407
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.24 E-value=4.6e-13 Score=129.92 Aligned_cols=113 Identities=14% Similarity=0.185 Sum_probs=74.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... .....||+.|||||++ .+ ......+++++|||||||+||+|+||+ |
T Consensus 191 ~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~------~~-----~~~~~~~~~~~Di~slG~il~el~tg~~p 256 (340)
T 3an0_A 191 GQVKMCDFGISGYLVDSVA---KTIDAGCKPYMAPERI------NP-----ELNQKGYSVKSDIWSLGITMIELAILRFP 256 (340)
T ss_dssp TCEEECCCSHHHHHSCHHH---HHHSSCCCCCCCHHHH------SC-----CTTCCSCCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCEEEeeCCCceecccccc---cccCCCCccccCcccc------cc-----ccccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 467888 55666654322 3457899999999998 32 011246788999999999999999999 9
Q ss_pred cchhhhh--heeeccccccCcchhhcchhhHHHHHHHHHHHhhh--cCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID--YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF--GSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+. ... ....... ......+.+++.+||..+|.+||++.++.+
T Consensus 257 ~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 257 YDSWGTPFQQLK---------------------QVV-EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp SCCCSCHHHHHH---------------------HHH-HSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CccccchHHHHH---------------------HHh-cCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 9753111 000 000 0000000 011224788999999999999999887765
No 408
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.24 E-value=5.8e-08 Score=99.81 Aligned_cols=237 Identities=10% Similarity=0.060 Sum_probs=158.1
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCC--CCceEEEEecCCcCeEEEEEe----cCCCCEEEEEcCCCcEEEEEccC
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYV----DEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~----~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
..+.++.++ ++++++++.|+.|.+||+. +++.+..+..... ...++|+ |++..++++...++++.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 356788998 8999999999999999995 8888888876444 5789999 57777777777789999999877
Q ss_pred CCCCcceeeecc-------cCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCcee--EEecCCCCCeEEEEEe--C
Q 009274 325 PLGHEPLKKWNE-------EKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLS--CTMSGHKSAVSTLAVC--N 392 (538)
Q Consensus 325 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~~--~ 392 (538)
.+....+..... +...... ....++++. +++....+|.|.++|....+.. ..+ .......++.|+ +
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva-~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVA-AILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSH 353 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEE-EEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTS
T ss_pred CcEEEEEeccccccccccccCCCceE-EEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCC
Confidence 654443332111 0011112 234455544 5666667799999998765432 222 234456788898 4
Q ss_pred CEEEEEe-cCCcEEEEECCCCceeEEEec-C---CCCceEEEEEEcCCCCEE-EEEe-CCCcEEEEeCCc---------c
Q 009274 393 GVLYSGS-RDGTIRLWSLSDHSLLTVLEE-D---SSGAVSSVLSLTAVQHTL-VVSH-ESGSIKVWRNDK---------F 456 (538)
Q Consensus 393 ~~l~s~s-~dg~i~iwd~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~l-~~~~-~dg~i~iwd~~~---------~ 456 (538)
+++++++ .++.|.++|+.+++.+..+.. . +.+... ..++|++..+ +++. .++.|.++|... .
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~--~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA--NFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE--EEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce--eeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 5665544 688999999999998777765 2 222222 2367875544 4443 468999998643 4
Q ss_pred eeeeccccce-E-EEEEeCCCEEEEEeC-------CCeEEEEecCCC
Q 009274 457 MKSMQTHKGS-V-FAVFLEGKWLFTGGW-------DKTVSVQELAGD 494 (538)
Q Consensus 457 ~~~~~~h~~~-v-~~~~~~~~~l~sgs~-------dg~v~iwd~~~~ 494 (538)
++++...... + ...+++++++.+... .+.|.++|+.+.
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 4555543222 1 334568998888763 359999999876
No 409
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.24 E-value=1.6e-12 Score=128.21 Aligned_cols=122 Identities=16% Similarity=0.227 Sum_probs=76.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+|+.+.+... .....||+.|||||++ .| ...++.++|||||||++|+|++|+ |
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~p 241 (383)
T 3eb0_A 179 NTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELM------LG--------ATEYTPSIDLWSIGCVFGELILGKPL 241 (383)
T ss_dssp TEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHh------cC--------CCCCCcchhhhhHHHHHHHHHhCCCC
Confidence 468888 66776654432 4468999999999998 43 234789999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHH----------------hhhc-CccchHHHHHhhhhccCCC
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLE----------------NKFG-SEFVSLQLMFCQCLNFDPG 150 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~~~l~~~~~~~l~~~p~ 150 (538)
|.+....... .+. + ....+. .+....... ...+ .....+.+++.+||..+|.
T Consensus 242 f~~~~~~~~~~~i~-~-------~~g~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 242 FSGETSIDQLVRII-Q-------IMGTPT--KEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp SCCSSHHHHHHHHH-H-------HHCCCC--HHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred CCCCChHHHHHHHH-H-------HhCCCC--HHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9875433111 000 0 000000 000000000 0000 1222378899999999999
Q ss_pred CCcchhhHHH
Q 009274 151 CRPLLTNVWK 160 (538)
Q Consensus 151 ~r~~~~~~~~ 160 (538)
+||++.++.+
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999887664
No 410
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.24 E-value=2.7e-12 Score=121.97 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=76.8
Q ss_pred eeeeec--cccccccccchh--hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
+.+|+. |+++.+.+.... .......||+.|||||++ .+ ..+++++||||||+++|+|++|.
T Consensus 165 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~~~ 229 (298)
T 3f66_A 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL------QT---------QKFTTKSDVWSFGVLLWELMTRG 229 (298)
T ss_dssp CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEECcccccccccccchhccccccCCCCCccccChHHh------cC---------CCCChHHHHHHHHHHHHHHHhCC
Confidence 457888 566665543321 123457889999999998 32 45778999999999999999955
Q ss_pred --ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 --QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.......+........ ... ........+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 230 APPYPDVNTFDITVYLLQGR-----RLL---------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp CCSSTTSCTTTHHHHHHTTC-----CCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHhcCC-----CCC---------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 666543331110000000 000 0001122377899999999999999999999988877
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 290 ~ 290 (298)
T 3f66_A 290 F 290 (298)
T ss_dssp H
T ss_pred H
Confidence 5
No 411
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.24 E-value=1.3e-09 Score=117.12 Aligned_cols=241 Identities=12% Similarity=0.083 Sum_probs=148.3
Q ss_pred CCCcEEEEEEc--CCEEEEEeCC-----CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC--------
Q 009274 251 HRDCVTGLAVG--GGFLFSSSFD-----KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG-------- 315 (538)
Q Consensus 251 h~~~V~~l~~~--~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg-------- 315 (538)
|...+.+++|+ |++|+.++.+ ..|++||+.+++.+... .+...+..++|+|+ ..+ +.++.++
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l-~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DAL-LYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEE-EEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEE-EEEEecCcccccccc
Confidence 44467889999 8888877654 36999999999876532 12222357899997 555 4444443
Q ss_pred ------cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC-----cEEEEECCCC--ceeEEecCCC
Q 009274 316 ------GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-----TIKAWSLLDG--TLSCTMSGHK 382 (538)
Q Consensus 316 ------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~i~iwd~~~~--~~~~~~~~h~ 382 (538)
.|++|++.++.....+. +.............+++||++|+..+.++ .|++||+.++ +....+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPV-FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEE-eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 38899987654322221 11111111123457899999888777544 8999999877 4144555555
Q ss_pred CCeEEEEEe-CCEEEEEecC----CcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEe--C-
Q 009274 383 SAVSTLAVC-NGVLYSGSRD----GTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--N- 453 (538)
Q Consensus 383 ~~v~~l~~~-~~~l~s~s~d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd--~- 453 (538)
..+....+. ++.|+..+.+ +.|.+||+.++. ....+..+....+ ..+.+. ++.++++...|+..++|. .
T Consensus 317 ~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l-~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 317 KAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL-ESVGIA-GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE-EEEEEE-BTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE-EEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 545444444 6777766653 459999998752 3344443333333 224555 566778888898877774 3
Q ss_pred Ccceeeecc-ccceEEEEEe--CCCEEE-EEe---CCCeEEEEecCCCeeE
Q 009274 454 DKFMKSMQT-HKGSVFAVFL--EGKWLF-TGG---WDKTVSVQELAGDEFE 497 (538)
Q Consensus 454 ~~~~~~~~~-h~~~v~~~~~--~~~~l~-sgs---~dg~v~iwd~~~~~~~ 497 (538)
++....+.. +.+.+..+++ +++.++ +.+ ..++|++||+.+++..
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 344555554 3566777765 666554 322 3478999999887743
No 412
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.24 E-value=1.4e-12 Score=125.18 Aligned_cols=104 Identities=19% Similarity=0.277 Sum_probs=72.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+.+.. .....||+.|||||++ .+ ....+.++|||||||++|+|++|+ |
T Consensus 187 ~~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWI------RY--------HRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp TEEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHH------HH--------SCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeeCcccccccccc----ccCCCCCccCCChHHh------cc--------CCCCCccchHHhHHHHHHHHHHCCCC
Confidence 468888 5566665442 4468899999999998 22 122367899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... . .... ......+.+++.+||+.+|.+||++.++.+
T Consensus 249 f~~~~~~~~~------~-----~~~~----------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 249 FEHDEEIIRG------Q-----VFFR----------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCSHHHHHHC------C-----CCCS----------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCChhhhhcc------c-----cccc----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9765322100 0 0000 011123778999999999999999887754
No 413
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.23 E-value=2e-12 Score=129.50 Aligned_cols=65 Identities=18% Similarity=0.245 Sum_probs=43.9
Q ss_pred eeeeec--cccccccccchh--------------------hhhhhccccccccChHHHHHHHhhcCceeeeccccccccc
Q 009274 12 SVAKVG--CVGSRICDKEVG--------------------LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGY 69 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~--------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~ 69 (538)
+..|+. |+|+........ ..+++.+||+.|||||++ .+ ...++.
T Consensus 166 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~------~~--------~~~~~~ 231 (432)
T 3n9x_A 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI------LL--------QENYTK 231 (432)
T ss_dssp CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHH------TT--------CSCCCT
T ss_pred CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHH------hc--------CCCCCc
Confidence 457888 677766543221 125679999999999997 22 255889
Q ss_pred cCcchhhhhhhhhhhhcC-ccc
Q 009274 70 GSDVWPVACILLSLLIGE-QFT 90 (538)
Q Consensus 70 ~sDi~slG~~l~~lltg~-pf~ 90 (538)
++|||||||+||||++|. ||.
T Consensus 232 ~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 232 SIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccchHHHHHHHHHhcccccc
Confidence 999999999999999865 544
No 414
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=7.1e-09 Score=100.15 Aligned_cols=256 Identities=10% Similarity=-0.031 Sum_probs=165.8
Q ss_pred CCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc---------CCCcEEEEEccCCCCCcceeeecccC--C
Q 009274 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK--D 339 (538)
Q Consensus 271 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~--~ 339 (538)
++.|.+.|..+++.+.++.....+ . ++++|++..++++.. .++.|.+||..+.+....+....... .
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 579999999999999999876666 4 999998888776653 46789999998876554443221000 0
Q ss_pred ceeeeEEEEeecCCEEEEeeC--CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCC-Cce
Q 009274 340 WRYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSL 414 (538)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~ 414 (538)
........+++||++++++.. ++.|.++|+.+++.+.++.... . ...+. ...+++.+.||++.+.++.+ ++.
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 011224589999998888864 6899999999999998885322 1 22233 55777889999999999986 555
Q ss_pred eEEEecCC---CCceEEEEEE-cCCCCEEEEEeCCCcEEEEeCCcc----eeeec------------cccceEEEEEeCC
Q 009274 415 LTVLEEDS---SGAVSSVLSL-TAVQHTLVVSHESGSIKVWRNDKF----MKSMQ------------THKGSVFAVFLEG 474 (538)
Q Consensus 415 ~~~~~~~~---~~~~~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~------------~h~~~v~~~~~~~ 474 (538)
........ ......-..| .++|++++ .+.+|.+++.|.... ...+. .......++..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 33221110 1111111233 46776555 556899999996432 22221 1112235566677
Q ss_pred CEEEEEeC----------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEEEE-CCCeEEEEEcC
Q 009274 475 KWLFTGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGC-ADRTVKVYYYG 537 (538)
Q Consensus 475 ~~l~sgs~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~-~dg~v~vw~~~ 537 (538)
+.++.... .+.|.+.|+.+.+......... ....+.+.+|+ +|+++. .++.|.++|..
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-----EIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----EECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-----CcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 77777643 2579999999998776554321 13344555665 466654 58999999975
No 415
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.23 E-value=2.7e-12 Score=124.07 Aligned_cols=110 Identities=19% Similarity=0.344 Sum_probs=74.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+...... .....||+.|||||++ .+ ..++.++|||||||+||+|++|+ |
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 240 (335)
T 2owb_A 178 LEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVL------SK---------KGHSFEVDVWSIGCIMYTLLVGKPP 240 (335)
T ss_dssp CCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHH------HT---------SCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeeccCceecccCccc--ccccCCCccccCHHHh------cc---------CCCCchhhHHHHHHHHHHHHHCcCC
Confidence 457888 556655433221 3458899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ..... .....+ .....+.+++.+||..+|.+||++.++.+
T Consensus 241 f~~~~~~~~~-----------------~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 241 FETSCLKETY-----------------LRIKK-----NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp TCCSSHHHHH-----------------HHHHH-----TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCCCHHHHH-----------------HHHhc-----CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 9865333111 00000 000000 11223778999999999999999988776
No 416
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.23 E-value=2.9e-12 Score=133.82 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=76.6
Q ss_pred eeeeeec--cccccccccchhhh-hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 11 KSVAKVG--CVGSRICDKEVGLF-LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
+..+|+. |+++.+........ .....||+.|||||++ .+ ..++.++|||||||+||||+| |
T Consensus 472 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~------~~---------~~~~~~sDvwSlGv~l~ellt~G 536 (613)
T 2ozo_A 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI------NF---------RKFSSRSDVWSYGVTMWEALSYG 536 (613)
T ss_dssp TTEEEECCCSTTTTCC--------------CCTTSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhh------cC---------CCCCcHHHHHHHHHHHHHHHHCC
Confidence 3568998 77777654432111 2235677999999998 22 567899999999999999998 9
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
+ ||.......+. .+. +.. .+ .........+.+++.+||..+|.+||+..++.+.+..
T Consensus 537 ~~Pf~~~~~~~~~~~i~-~~~-------~~-------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 537 QKPYKKMKGPEVMAFIE-QGK-------RM-------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp CCTTTTCCSHHHHHHHH-TTC-------CC-------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHH-cCC-------CC-------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 9 99875433111 000 000 00 0001122347889999999999999999999888877
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
++
T Consensus 596 ~~ 597 (613)
T 2ozo_A 596 CY 597 (613)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 417
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.23 E-value=4.1e-12 Score=120.72 Aligned_cols=119 Identities=18% Similarity=0.147 Sum_probs=78.1
Q ss_pred eeeeec--cccccccccchh--hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC
Q 009274 12 SVAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~ 87 (538)
+..|+. |+++.+.+.... .......||+.|+|||++ .+ ..+++++|||||||++|+|++|.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~ 225 (298)
T 3pls_A 161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL------QT---------YRFTTKSDVWSFGVLLWELLTRG 225 (298)
T ss_dssp CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHHTS
T ss_pred CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhh------cc---------CCCChhhchhhHHHHHHHHhhCC
Confidence 357888 566655443311 113357899999999999 44 56789999999999999999966
Q ss_pred --ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-hcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 88 --QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 88 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
||.......+... ........ .......+.+++.+||..+|.+||++.++.+.+.+
T Consensus 226 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 226 APPYRHIDPFDLTHF---------------------LAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp CCTTTTSCGGGHHHH---------------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHH---------------------hhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 4544333211100 00000000 00112237789999999999999999999888877
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
+.
T Consensus 285 ~~ 286 (298)
T 3pls_A 285 IV 286 (298)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 418
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.23 E-value=2.5e-12 Score=125.76 Aligned_cols=64 Identities=22% Similarity=0.414 Sum_probs=47.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+.+.. .....||+.|||||++ .+ ..++.++|||||||++|+|++|+ |
T Consensus 169 ~~~kl~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 229 (360)
T 3eqc_A 169 GEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVEMAVGRYP 229 (360)
T ss_dssp CCEEECCCCCCHHHHHHC--------CCCCTTCCHHHH------TT---------CCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCccccccc----ccCCCCCCCeECHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 5555554332 4468999999999999 44 56789999999999999999999 9
Q ss_pred cchhhh
Q 009274 89 FTKELI 94 (538)
Q Consensus 89 f~~~~~ 94 (538)
|.....
T Consensus 230 f~~~~~ 235 (360)
T 3eqc_A 230 IPPPDA 235 (360)
T ss_dssp SSCCCH
T ss_pred CCCCCH
Confidence 986543
No 419
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.23 E-value=2.7e-12 Score=121.75 Aligned_cols=111 Identities=18% Similarity=0.324 Sum_probs=74.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++........ .....||+.|+|||++ .+ ..++.++||||||+++|+|++|+ |
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~l~~g~~p 214 (294)
T 2rku_A 152 LEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVL------SK---------KGHSFEVDVWSIGCIMYTLLVGKPP 214 (294)
T ss_dssp CCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHH------TT---------SCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEeccCceecccCccc--cccccCCCCcCCcchh------cc---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 455554432221 3457899999999998 43 45678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|......... .+. .. .... .......+.+++.+||..+|.+||++.++.+.
T Consensus 215 ~~~~~~~~~~~~~~--~~-----~~~~---------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 215 FETSCLKETYLRIK--KN-----EYSI---------------PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TCCSSHHHHHHHHH--TT-----CCCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCCCHHHHHHHHh--hc-----cCCC---------------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 9875333111 000 00 0000 00111237789999999999999999887763
No 420
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.23 E-value=6.8e-13 Score=125.60 Aligned_cols=116 Identities=14% Similarity=0.161 Sum_probs=64.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++....... .....||+.|||||++ .+ ......+++++|||||||++|+|+||+ |
T Consensus 147 ~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~------~~-----~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 147 GQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERI------NP-----ELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp CCEEBCCC------------------CCCCCCSCHHHH------SC-----CTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCEEEeecCCccccccccc---ccccCCCccccChhhc------Ch-----hhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 457888 55666554432 3346899999999997 21 012356788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ........... ........+.+++.+||+.+|.+||++.++.+
T Consensus 213 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 213 YDSWGTPFQQ-------------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp SCCCSCHHHH-------------------HHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccccCchHHH-------------------HHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 9752111000 00000000000 00011224778999999999999999887765
No 421
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.23 E-value=4.4e-12 Score=120.09 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=47.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-+|+. |+++....... ..+...||+.|||||++ .+ ...++.++|||||||++|+|++|. |
T Consensus 138 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~~~~p 201 (292)
T 3o0g_A 138 GELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVL------FG--------AKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_dssp SCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred CCEEEeecccceecCCccc--cccCCccccCCcChHHH------cC--------CCCcCchHHHHHHHHHHHHHHHcCCC
Confidence 457888 56666543322 24568999999999999 43 133789999999999999999988 7
Q ss_pred c
Q 009274 89 F 89 (538)
Q Consensus 89 f 89 (538)
|
T Consensus 202 ~ 202 (292)
T 3o0g_A 202 L 202 (292)
T ss_dssp S
T ss_pred C
Confidence 4
No 422
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.23 E-value=5.6e-12 Score=119.81 Aligned_cols=132 Identities=13% Similarity=0.123 Sum_probs=74.2
Q ss_pred eeeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+ +++....... ......||+.|+|||++ .+ ...++.++|||||||++|+|+||+ |
T Consensus 140 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~p 203 (299)
T 2r3i_A 140 GAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEIL------LG--------AKYYSTAVDIWSLGCIFAEMVTRRAL 203 (299)
T ss_dssp SCEEECSTTHHHHHCCCSB--CTTSCBCCCTTCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEECcchhhhhccCCcc--ccCcccccccccCcHHh------hc--------cccCChHHHHHHHHHHHHHHHhCCCC
Confidence 4578884 4555443322 14467899999999998 43 123678999999999999999999 9
Q ss_pred cchhhhhhee-e-ccccccCcchhhcchhh---HHHHHHH----HHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHH
Q 009274 89 FTKELIDYIR-C-VSTKASDDNIACLGMYM---AWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (538)
Q Consensus 89 f~~~~~~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~ 159 (538)
|.+....... . .+........ .+.... ......+ .............+.+++.+||..+|.+||++.++.
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l 282 (299)
T 2r3i_A 204 FPGDSEIDQLFRIFRTLGTPDEV-VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282 (299)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCccHHHHHHHHHHHhCCCchh-hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 9875433111 0 0000000000 000000 0000000 000000011123478899999999999999988776
Q ss_pred H
Q 009274 160 K 160 (538)
Q Consensus 160 ~ 160 (538)
+
T Consensus 283 ~ 283 (299)
T 2r3i_A 283 A 283 (299)
T ss_dssp T
T ss_pred c
Confidence 5
No 423
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.23 E-value=1.3e-12 Score=122.66 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=73.0
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+.............||+.|+|||++ .+ ....+.++||||||+++|+|++|+ |
T Consensus 142 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~p 207 (276)
T 2yex_A 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL------KR--------REFHAEPVDVWSCGIVLTAMLAGELP 207 (276)
T ss_dssp CCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGG------TC--------SSBCHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEeeCCCccccCCCcchhcccCCccccCccChHHH------hc--------CCCCCCcchHHHHHHHHHHHHhCCCC
Confidence 457888 455554433222224568999999999998 33 122367899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|................. .... ........+.+++.+||..+|.+||++.++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~------~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 208 WDQPSDSCQEYSDWKEKK------TYLN------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CSCSCTTSHHHHHHHTTC------TTST------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCchHHHHHHHhhhcc------cccC------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 986533200000000000 0000 00111223778999999999999999877654
No 424
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.23 E-value=4.8e-12 Score=121.90 Aligned_cols=116 Identities=15% Similarity=0.131 Sum_probs=66.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++....... ......||+.|||||++.... .....+++++|||||||++|+|++|+ |
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~----------~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDE----------NPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp CCEEECCCTTTC---------------CCGGGCCHHHHC------------------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeeCcCceecCcCcc--ccccccCCccccChhhhcccc----------ccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 457888 45555543321 134678999999999982111 01356788999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh--hhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ......+.. ........+.+++.+||..+|.+||++.++.+
T Consensus 234 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 234 LCDMHPMRAL---------------------FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp TTTSCHHHHH---------------------HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCcHHHHH---------------------HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 9765333111 000000000 00111234788999999999999999887765
No 425
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.23 E-value=1.8e-12 Score=121.84 Aligned_cols=110 Identities=21% Similarity=0.287 Sum_probs=53.5
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+-.|+. |+++........ .....||+.|||||++ .+ ..+++++||||||+++|+|++|+ |
T Consensus 149 ~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 211 (278)
T 3cok_A 149 MNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIA------TR---------SAHGLESDVWSLGCMFYTLLIGRPP 211 (278)
T ss_dssp CCEEECCCTTCEECC---------------------------------------------CTHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeecceeeccCCCCc--ceeccCCCCcCCcchh------cC---------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 455555432221 3357899999999998 33 45678999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .+... ....+. .....+.+++.+||..+|.+||++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~-------~~~~~~---------------~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 212 FDTDTVKNTLNKVVLA-------DYEMPS---------------FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCCCSCC-----CCSS-------CCCCCT---------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCChhHHHHHHHHhhc-------ccCCcc---------------ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 9875433111 00000 000000 01123778999999999999999877654
No 426
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.23 E-value=3.9e-12 Score=125.75 Aligned_cols=47 Identities=23% Similarity=0.247 Sum_probs=39.5
Q ss_pred hccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhh
Q 009274 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (538)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~ 93 (538)
..+||+.|||||++ .+ ....++.++|||||||+||+|++|+ ||.+..
T Consensus 194 ~~~gt~~y~aPE~~------~~-------~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 194 YSVKVLPWLSPEVL------QQ-------NLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp TCTTTGGGSCHHHH------ST-------TSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccccCHHHH------hc-------cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 46899999999999 33 1245789999999999999999999 998743
No 427
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.23 E-value=3.5e-12 Score=123.14 Aligned_cols=62 Identities=19% Similarity=0.326 Sum_probs=48.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++....... .....||+.|||||++ .+ ...++.++|||||||+||+|++|+ ||
T Consensus 169 ~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~p~ 231 (330)
T 3nsz_A 169 KLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELL------VD--------YQMYDYSLDMWSLGCMLASMIFRKEPF 231 (330)
T ss_dssp EEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred EEEEEeCCCceEcCCCCc---cccccccccccChhhh------cC--------CCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence 57888 66666654432 4567999999999998 32 245788999999999999999999 99
Q ss_pred ch
Q 009274 90 TK 91 (538)
Q Consensus 90 ~~ 91 (538)
..
T Consensus 232 ~~ 233 (330)
T 3nsz_A 232 FH 233 (330)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 428
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.22 E-value=3.1e-12 Score=133.98 Aligned_cols=120 Identities=15% Similarity=0.197 Sum_probs=76.5
Q ss_pred eeeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-c
Q 009274 11 KSVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g 86 (538)
+..+|+. |+|+.+...... ...+...||+.|||||++ .+ ..++.++|||||||+||||++ |
T Consensus 505 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~------~~---------~~~~~~sDvwSlGv~l~ellt~G 569 (635)
T 4fl3_A 505 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI------NY---------YKFSSKSDVWSFGVLMWEAFSYG 569 (635)
T ss_dssp TTEEEECCTTHHHHTTC-------------CGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEcCCccccccCccccccccCCCCceeeeChhhh------cC---------CCCCcHHHHHHHHHHHHHHHhCC
Confidence 3468898 677766544321 113346788999999999 22 567899999999999999999 9
Q ss_pred C-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHH
Q 009274 87 E-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (538)
Q Consensus 87 ~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~ 164 (538)
+ ||.+.....+. .+. +.. ... ........+.+++.+||..+|.+||+..++.+.+..
T Consensus 570 ~~Pf~~~~~~~~~~~i~-~~~-----~~~---------------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 570 QKPYRGMKGSEVTAMLE-KGE-----RMG---------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CCSSTTCCHHHHHHHHH-TTC-----CCC---------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHH-cCC-----CCC---------------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 9 99875443111 000 000 000 000112247889999999999999999999888776
Q ss_pred hh
Q 009274 165 LI 166 (538)
Q Consensus 165 l~ 166 (538)
+.
T Consensus 629 ~~ 630 (635)
T 4fl3_A 629 YY 630 (635)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 429
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.22 E-value=8e-12 Score=121.77 Aligned_cols=129 Identities=13% Similarity=0.162 Sum_probs=71.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++..... .+...||+.|||||++ .+ ...++.++|||||||++|+|++|+ |
T Consensus 163 ~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~el~~g~~p 223 (353)
T 3coi_A 163 CELKILDFGLARHADAE-----MTGYVVTRWYRAPEVI------LS--------WMHYNQTVDIWSVGCIMAEMLTGKTL 223 (353)
T ss_dssp CCEEECSTTCTTC-------------CCSBCCSCHHHH------SC--------CSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEeecccccCCCCC-----ccccccCcCcCCHHHH------hC--------cCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 457888 555655433 3468999999999998 33 245788999999999999999999 9
Q ss_pred cchhhhhhee-ec-cccccC-cchhhcchhhH-HHHHHHHHHHh-------hhcCccchHHHHHhhhhccCCCCCcchhh
Q 009274 89 FTKELIDYIR-CV-STKASD-DNIACLGMYMA-WMEKVTYLLEN-------KFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (538)
Q Consensus 89 f~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~l~~~~~~~l~~~p~~r~~~~~ 157 (538)
|.+....... .+ ...... ..+ ....... ........+.. ........+.+++.+||..+|.+||++.+
T Consensus 224 f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 302 (353)
T 3coi_A 224 FKGKDYLDQLTQILKVTGVPGTEF-VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 302 (353)
T ss_dssp SBSSCHHHHHHHHHHHHCBCCHHH-HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHH-HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 9875433111 00 000000 000 0000000 00000000000 00112334889999999999999999887
Q ss_pred HHH
Q 009274 158 VWK 160 (538)
Q Consensus 158 ~~~ 160 (538)
+.+
T Consensus 303 ~l~ 305 (353)
T 3coi_A 303 ALT 305 (353)
T ss_dssp HHT
T ss_pred Hhc
Confidence 654
No 430
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=1.1e-08 Score=97.50 Aligned_cols=242 Identities=14% Similarity=0.076 Sum_probs=150.0
Q ss_pred ecCCCcEEEEEEc--CCEEEE-------EeCCCcEEEEeCCCCceEEEEe----cCCcCeEEEEEecCCCCEEEEEcCCC
Q 009274 249 QGHRDCVTGLAVG--GGFLFS-------SSFDKSIHVWSLKDFSHVHTFK----GHDHKVMAVVYVDEDQPLCISGDSGG 315 (538)
Q Consensus 249 ~~h~~~V~~l~~~--~~~l~s-------~s~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~~~dg 315 (538)
...-....+++|+ +..+++ +..++.|.+||..+++...... ++...+.++++.++++.++++.. .+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 3344556788997 666666 5778999999988877643222 14467899999886355555444 44
Q ss_pred cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCC---------------CcEEEEECCCCceeEEecC
Q 009274 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD---------------RTIKAWSLLDGTLSCTMSG 380 (538)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------------g~i~iwd~~~~~~~~~~~~ 380 (538)
.|.+||.. ++....................++.+++++.++...+ +.|..||.. ++..... .
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-T 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-E
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-c
Confidence 78889976 3321110110001111112345677888877766554 578888865 5543332 2
Q ss_pred CCCCeEEEEEe----CC--EEEEE-ecCCcEEEEECC-CCcee--EEEec-CCCC-ceEEEEEEcCCCCEEEEEeCCCcE
Q 009274 381 HKSAVSTLAVC----NG--VLYSG-SRDGTIRLWSLS-DHSLL--TVLEE-DSSG-AVSSVLSLTAVQHTLVVSHESGSI 448 (538)
Q Consensus 381 h~~~v~~l~~~----~~--~l~s~-s~dg~i~iwd~~-~~~~~--~~~~~-~~~~-~~~~~~~~~~~~~~l~~~~~dg~i 448 (538)
+......++++ ++ .++.+ ..++.|.+||.. +++.. ..+.. .... .....++++++|+++++...++.|
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 33456788887 44 45444 567899999986 44321 11111 1111 223347899999988888888999
Q ss_pred EEEeCC--cceeeeccccceEEEEEe--CCCEEE-EEeCCCeEEEEecCCC
Q 009274 449 KVWRND--KFMKSMQTHKGSVFAVFL--EGKWLF-TGGWDKTVSVQELAGD 494 (538)
Q Consensus 449 ~iwd~~--~~~~~~~~h~~~v~~~~~--~~~~l~-sgs~dg~v~iwd~~~~ 494 (538)
.+||.. +....+..+...+.++.+ +++.|+ +...++.|..|++...
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999965 455556666667788876 777554 4555689999998753
No 431
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.22 E-value=1.3e-12 Score=123.37 Aligned_cols=111 Identities=22% Similarity=0.234 Sum_probs=73.1
Q ss_pred eeeecc--ccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVGC--VGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+.+ +++....... .....||+.|+|||++ .| .++.++||||||+++|+|++|+ ||
T Consensus 162 ~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~----------~~~~~~Di~slG~~l~~l~~g~~p~ 222 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVL------RG----------TYDEKCDVWSAGVILYILLSGTPPF 222 (287)
T ss_dssp CEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHH------TT----------CCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEeccCcceeecCCCc---cccccCcccccChHHh------cC----------CCCCchhhHhHHHHHHHHHhCCCCC
Confidence 578884 4555543322 3456799999999998 33 4778999999999999999999 99
Q ss_pred chhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 90 TKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
.......+. .+... . .....+ ........+.+++.+||..+|.+||++.++.+
T Consensus 223 ~~~~~~~~~~~~~~~-~-----~~~~~~------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 223 YGKNEYDILKRVETG-K-----YAFDLP------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSSHHHHHHHHHHC-C-----CCCCSG------------GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHcC-C-----CCCCch------------hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 875433111 00000 0 000000 00111223778999999999999999988765
No 432
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.22 E-value=3.9e-12 Score=128.62 Aligned_cols=41 Identities=24% Similarity=0.434 Sum_probs=31.3
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
+++.+||+.|||||++ .+ ...++.++|||||||+||||+||
T Consensus 240 ~~~~~gt~~Y~aPE~~------~~--------~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 240 LTGHVVTRWYRAPELI------LL--------QENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp -----CCCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCCcccccccChHHh------hC--------CCCCCcHhHHHHHHHHHHHHHHh
Confidence 5678999999999987 22 25588999999999999999993
No 433
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.22 E-value=9.8e-12 Score=119.04 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=74.1
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++.+.+... ......||+.|+|||++ .+ ..++.++||||||+++|+|++|+ |
T Consensus 162 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p 224 (314)
T 3com_A 162 GHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVI------QE---------IGYNCVADIWSLGITAIEMAEGKPP 224 (314)
T ss_dssp CCEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHH------SS---------SCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEeecccchhhhhhcc--ccCccCCCCCccChhhc------CC---------CCCCccccHHHHHHHHHHHHhCCCC
Confidence 457888 45555544322 13457899999999999 44 56789999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .+...... .... .......+.+++.+||..+|.+||++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 225 YADIHPMRAIFMIPTNPPP----TFRK---------------PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp TTTSCHHHHHHHHHHSCCC----CCSS---------------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCChHHHHHHHhcCCCc----ccCC---------------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9764332110 00000000 0000 0001123778999999999999999887765
No 434
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.21 E-value=6e-09 Score=102.51 Aligned_cols=257 Identities=11% Similarity=0.005 Sum_probs=169.2
Q ss_pred CcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc---------CCCcEEEEEccCCCCCcceeeecccC--Cc
Q 009274 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK--DW 340 (538)
Q Consensus 272 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~--~~ 340 (538)
+.|.++|..+++.+.++.....+ .++++|+++.++++.. .++.|.++|..+.+....+....... ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 68999999999999999876666 8999998888877653 46799999998876554443210000 00
Q ss_pred eeeeEEEEeecCCEEEEeeC--CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCceeEE
Q 009274 341 RYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTV 417 (538)
Q Consensus 341 ~~~~~~~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~ 417 (538)
....-..+++||++++++.. ++.|.+.|+.+++.+.++.... ...+.-. ...+++.+.||.+.+.+..+++....
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 01113489999999998874 5789999999999988886422 1222222 45777888999999999966665532
Q ss_pred E----ecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcc-e---eeec------------cccceEEEEEeCCCEE
Q 009274 418 L----EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-M---KSMQ------------THKGSVFAVFLEGKWL 477 (538)
Q Consensus 418 ~----~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~---~~~~------------~h~~~v~~~~~~~~~l 477 (538)
. ... .........+.+++..++.....+.+.+.|.... . ..+. ........++++++.+
T Consensus 255 ~~~~~~v~-~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rl 333 (426)
T 3c75_H 255 NTEVFHTE-DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRI 333 (426)
T ss_dssp ECCCCSCT-TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEE
T ss_pred eeeeeccC-CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEE
Confidence 2 111 1111112467888888877788899999995321 1 1111 0111123667787776
Q ss_pred EEEeC----------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCC--EEEEEE-CCCeEEEEEcCC
Q 009274 478 FTGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGC-ADRTVKVYYYGK 538 (538)
Q Consensus 478 ~sgs~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sg~-~dg~v~vw~~~~ 538 (538)
++... ++.|.++|+.+.+......... ......+.+|+ +++++. .++.|.++|..+
T Consensus 334 yVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 334 YLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 66542 3579999999998766554221 13344455555 467776 599999999753
No 435
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.21 E-value=4.3e-09 Score=111.14 Aligned_cols=270 Identities=11% Similarity=0.083 Sum_probs=173.2
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcC-----------eEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK-----------VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 260 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~-----------v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
..++.++.++.++.|..+|..+|+.+..+...... ...+++ .+..++.++.|+.+..+|..+++..
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~---~~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL---WKGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE---ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE---ECCEEEEEcCCCEEEEEECCCCCEE
Confidence 34788888888999999999999999998754321 122333 2346677888999999999988765
Q ss_pred cceeee-cccCCceeeeEEEEeecCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCC-----------------
Q 009274 329 EPLKKW-NEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSA----------------- 384 (538)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~~~----------------- 384 (538)
...... .......... .....+..+++++. ++.|+.||..+|+.++.+......
T Consensus 152 W~~~~~~~~~~~~~~~~--~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITG--APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEETTTTCCSSCBCCS--CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred eeecCCcCcCcCccccc--CcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 444322 1000000000 11112556666654 699999999999999887542211
Q ss_pred ---------------eEEEEEe--CCEEEEEecCC-------------------cEEEEECCCCceeEEEecCCCC----
Q 009274 385 ---------------VSTLAVC--NGVLYSGSRDG-------------------TIRLWSLSDHSLLTVLEEDSSG---- 424 (538)
Q Consensus 385 ---------------v~~l~~~--~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~~~~---- 424 (538)
...++++ .+.++.++.++ .|..+|.++|+.+..+...+..
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 1245666 56888777664 5999999999999887753221
Q ss_pred ---ceEEEEEEcCCC---CEEEEEeCCCcEEEEeC--Ccceeeecccc-----------ce-------------------
Q 009274 425 ---AVSSVLSLTAVQ---HTLVVSHESGSIKVWRN--DKFMKSMQTHK-----------GS------------------- 466 (538)
Q Consensus 425 ---~~~~~~~~~~~~---~~l~~~~~dg~i~iwd~--~~~~~~~~~h~-----------~~------------------- 466 (538)
..........+| ..++.++.+|.++++|. ++.+..+.... .+
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 111112344467 68899999999999994 44443332110 01
Q ss_pred -------EEEEEeCCCEEEEEeC-------------------------------------------CCeEEEEecCCCee
Q 009274 467 -------VFAVFLEGKWLFTGGW-------------------------------------------DKTVSVQELAGDEF 496 (538)
Q Consensus 467 -------v~~~~~~~~~l~sgs~-------------------------------------------dg~v~iwd~~~~~~ 496 (538)
-.++++++.++++... .|.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 1234456677776543 27899999999998
Q ss_pred EeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcCC
Q 009274 497 EEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~~ 538 (538)
............ ..+...++.+++++.||.+++||..+
T Consensus 470 ~W~~~~~~~~~~----g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 470 AWSVEHVSPWNG----GTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp EEEEEESSSCCC----CEEEETTTEEEEECTTSEEEEEETTT
T ss_pred EeecCCCCCCcC----cceEeCCCEEEEECCCCcEEEEECCC
Confidence 877665322111 12334577888899999999999753
No 436
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.20 E-value=4.6e-09 Score=99.31 Aligned_cols=230 Identities=13% Similarity=0.110 Sum_probs=142.7
Q ss_pred CCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeC
Q 009274 281 DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG 360 (538)
Q Consensus 281 ~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 360 (538)
.+..+..+..+.....+++|+|+++.+++++..++.|..||..++ ...+.... ......+++++++++++...
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~--~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPS--HHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSC--SSEEEEEECTTCCEEEEETT
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCC--CCcceeeECCCCcEEEEecC
Confidence 344556666677788999999977768899999999999998764 22222211 11234577888988777777
Q ss_pred CCcEEEEECCCCceeEEecCC----CCCeEEEEEe--CCEEEE----Ee-------------cCCcEEEEECCCCceeEE
Q 009274 361 DRTIKAWSLLDGTLSCTMSGH----KSAVSTLAVC--NGVLYS----GS-------------RDGTIRLWSLSDHSLLTV 417 (538)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s----~s-------------~dg~i~iwd~~~~~~~~~ 417 (538)
++.|.+||..+++........ ...+.+++++ ++++++ |+ ..+.|..+|.. ++. ..
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~ 166 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SA 166 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EE
Confidence 789999999888754433211 2346678888 345555 22 13456666654 443 33
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC---cc---eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEE
Q 009274 418 LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KF---MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQ 489 (538)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~---~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iw 489 (538)
+... ... ...++++|+++.+++.+.++.|.+||.. +. ...+..+...+.++.+ +|+++++. ++.|.+|
T Consensus 167 ~~~~-~~~-~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 167 PIRD-RVK-PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVL 242 (296)
T ss_dssp EECC-CSS-EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred eecC-CCC-CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence 3322 222 2347999999998777778999999954 22 1222223333445555 77766655 8899999
Q ss_pred ecCCCeeEeeeecCCcccCCCceEEEEE-eCC-EEEEEECCC
Q 009274 490 ELAGDEFEEDVIPTGAIPCGSVITALLY-WQG-KLFVGCADR 529 (538)
Q Consensus 490 d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~sg~~dg 529 (538)
|..+... ...... .. +..+.+. +++ .|++++.++
T Consensus 243 ~~~g~~~-~~~~~~----~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 243 TPDGDEL-GRVLTP----QT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp CTTSCEE-EEEECS----SC-CCEEEEESTTSCEEEEEETTE
T ss_pred CCCCCEE-EEEECC----CC-ceeEEEECCCCCEEEEEcCCe
Confidence 9975433 332221 22 3333342 344 577877764
No 437
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.20 E-value=5.3e-12 Score=132.68 Aligned_cols=119 Identities=17% Similarity=0.214 Sum_probs=77.3
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
++.+|+. |+++.+.+... ...+...||+.|||||++ .+ ..++.++|||||||+||||++ |.
T Consensus 527 ~~~vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ellt~g~ 590 (656)
T 2j0j_A 527 NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESI------NF---------RRFTSASDVWMFGVCMWEILMHGV 590 (656)
T ss_dssp TTEEEECCCCCCCSCCC-----------CCGGGCCHHHH------HH---------CCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHh------cC---------CCCCchhhHHHHHHHHHHHHHcCC
Confidence 3568888 67777654432 223457789999999998 22 457789999999999999997 88
Q ss_pred -ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHh-hhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+. ..+...... ........+.+++.+||..+|.+||++.++.+.+..+
T Consensus 591 ~Pf~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 591 KPFQGVKNNDVI---------------------GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CTTTTCCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99875433111 000000000 0011223478899999999999999999999888876
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
+
T Consensus 650 l 650 (656)
T 2j0j_A 650 L 650 (656)
T ss_dssp H
T ss_pred H
Confidence 5
No 438
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.20 E-value=2.8e-12 Score=120.40 Aligned_cols=111 Identities=23% Similarity=0.317 Sum_probs=64.9
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....||+.|+|||++ .+ ....++++||||||+++|+|++|+ |
T Consensus 148 ~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~p 210 (276)
T 2h6d_A 148 MNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVI------SG--------RLYAGPEVDIWSCGVILYALLCGTLP 210 (276)
T ss_dssp SCEEECCCCGGGCCCC----------------CCTGGG------TT--------SCCCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEeecccccccCCCcc---eecccCCccccCHHHH------cC--------CCCCCccchHHHHHHHHHHHHhCCCC
Confidence 457888 55565554332 4467899999999998 33 122367999999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhc-CccchHHHHHhhhhccCCCCCcchhhHHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~ 161 (538)
|.......+. ....... ...+ .....+.+++.+||..+|.+||++.++.++
T Consensus 211 ~~~~~~~~~~-----------------~~~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 211 FDDEHVPTLF-----------------KKIRGGV-----FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp SCCSSHHHHH-----------------HHHHHCC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCCCcHHHHH-----------------HHhhcCc-----ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 9765333111 0000000 0000 112247789999999999999999888763
No 439
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.20 E-value=2.9e-12 Score=122.90 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=69.7
Q ss_pred hhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhh
Q 009274 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (538)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (538)
....||+.|||||++ .+ .....+++++|||||||++|+|++|+ ||......... .
T Consensus 201 ~~~~gt~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------------~ 256 (317)
T 2buj_A 201 AAQRCTISYRAPELF------SV------QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS------------V 256 (317)
T ss_dssp HHHHSCGGGCCGGGS------SC------CSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC------------H
T ss_pred ccccCCcccCCHhHh------cc------CCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch------------h
Confidence 357899999999998 33 11234678999999999999999999 99764322000 0
Q ss_pred cchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHhh
Q 009274 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (538)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l~ 166 (538)
.. .... .............+.+++.+||..+|.+||++.++.+.+..+.
T Consensus 257 ~~---~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 257 AL---AVQN---QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HH---HHHC---C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hH---Hhhc---cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 0000 0000000112234788999999999999999999999888765
No 440
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.20 E-value=5e-12 Score=130.03 Aligned_cols=119 Identities=21% Similarity=0.212 Sum_probs=81.4
Q ss_pred eeeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC
Q 009274 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (538)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~ 87 (538)
+..+|+. |+++.+.+.... ......||+.|||||++ .+ ..++.++|||||||+||||+| |+
T Consensus 399 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~sDvwSlGv~l~el~t~g~ 462 (535)
T 2h8h_A 399 NLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAA------LY---------GRFTIKSDVWSFGILLTELTTKGR 462 (535)
T ss_dssp GGCEEECCTTSTTTCCCHHHH-TTCSTTSCGGGSCHHHH------HH---------CCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CCcEEEcccccceecCCCcee-cccCCcCcccccCHHHh------cc---------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 3468898 677777654322 23356788999999998 22 567889999999999999999 88
Q ss_pred -ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHHHHHHh
Q 009274 88 -QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (538)
Q Consensus 88 -pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l~~l 165 (538)
||.+.....+. .+. . . ..+. ........+.+++.+||..+|.+||+..++.+.+..+
T Consensus 463 ~P~~~~~~~~~~~~i~-~-~------~~~~-------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 463 VPYPGMVNREVLDQVE-R-G------YRMP-------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp CSSTTCCHHHHHHHHH-T-T------CCCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHH-c-C------CCCC-------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99875433111 000 0 0 0000 0001122377899999999999999999999888776
Q ss_pred h
Q 009274 166 I 166 (538)
Q Consensus 166 ~ 166 (538)
.
T Consensus 522 ~ 522 (535)
T 2h8h_A 522 F 522 (535)
T ss_dssp S
T ss_pred h
Confidence 5
No 441
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.20 E-value=9.1e-12 Score=118.53 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=70.3
Q ss_pred eeeeecccc--ccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVGCVG--SRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+.+++ +...... .......||+.|||||++...... ...++.++||||||+++|+|++|+ |
T Consensus 154 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~----------~~~~~~~~Di~slG~il~~l~~g~~p 221 (302)
T 2j7t_A 154 GDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMK----------DTPYDYKADIWSLGITLIEMAQIEPP 221 (302)
T ss_dssp SCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTT----------STTTTTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEECCCCccccccc--cccccccCChhhcCCeeeccccCC----------CCCCchhhhHHHHHHHHHHHhcCCCC
Confidence 457888554 3322221 113457899999999998443222 245778999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... .+...... .... .......+.+++.+||..+|.+||++.++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 222 HHELNPMRVLLKIAKSDPP----TLLT---------------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp TTTSCHHHHHHHHHHSCCC----CCSS---------------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CccCCHHHHHHHHhccCCc----ccCC---------------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 9865433111 00000000 0000 0011123778999999999999999877654
No 442
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.19 E-value=3.8e-12 Score=127.19 Aligned_cols=118 Identities=18% Similarity=0.275 Sum_probs=68.0
Q ss_pred eeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhh-cC-
Q 009274 13 VAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~llt-g~- 87 (538)
.+|+. |+|+.+...... ...+..+||+.|||||++ .+ .....++.++|||||||+||+|+| |.
T Consensus 161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l------~~------~~~~~~t~~~DiwSlG~il~ellt~g~~ 228 (432)
T 3p23_A 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML------SE------DCKENPTYTVDIFSAGCVFYYVISEGSH 228 (432)
T ss_dssp CEEECCTTEEECC------------CCSCTTSCCGGGT------SC------C---CCCTHHHHHHHHHHHHHHHTTSCB
T ss_pred eEEEecccceeeccCCCcceeeccccCCCcCccChhhh------hc------ccccCCCcHHHHHHHHHHHHHHHcCCCC
Confidence 36788 667766543221 123468899999999998 32 012456779999999999999999 88
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||..........+..... ........ ..+. .+.+++.+||+.+|.+||++.++.+
T Consensus 229 pf~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~-----------~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 229 PFGKSLQRQANILLGACS---LDCLHPEK----HEDV-----------IARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTBSTTTHHHHHHTTCCC---CTTSCTTC----HHHH-----------HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcchhhHHHHHHHhccCC---ccccCccc----cccH-----------HHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 997643331110000000 00000000 0111 1567999999999999999877653
No 443
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.19 E-value=8.5e-12 Score=120.15 Aligned_cols=131 Identities=15% Similarity=0.179 Sum_probs=80.6
Q ss_pred eeeeec--cccccccccchh-hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
+..|+. |+++........ .......||+.|||||++ .+ ..++.++||||||+++|+|+||.
T Consensus 182 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~tg~~ 246 (326)
T 2w1i_A 182 NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL------TE---------SKFSVASDVWSFGVVLYELFTYIE 246 (326)
T ss_dssp TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHH------HH---------CEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEecCcchhhccccccccccccCCCCceeEECchhh------cC---------CCCCchhhHHHHHHHHHHHHhcCC
Confidence 457888 566665543221 112346788999999998 32 45678999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhh-----hcCccchHHHHHhhhhccCCCCCcchhhHHHHH
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENK-----FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~~l 162 (538)
||............ ................... .......+.+++.+||+.+|.+||++.++.+.+
T Consensus 247 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L 317 (326)
T 2w1i_A 247 KSKSPPAEFMRMIG---------NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317 (326)
T ss_dssp GGGSHHHHHHHHHC---------TTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CCCCCHHHHHHhhc---------cccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 88754322111000 0000000111111111111 012223588999999999999999999998887
Q ss_pred HHhh
Q 009274 163 RELI 166 (538)
Q Consensus 163 ~~l~ 166 (538)
.++.
T Consensus 318 ~~l~ 321 (326)
T 2w1i_A 318 DQIR 321 (326)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 444
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.18 E-value=1.1e-11 Score=121.41 Aligned_cols=124 Identities=10% Similarity=0.104 Sum_probs=67.4
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++....... .....||+.|||||++ .+ ...+++++|||||||++|+|++|+ |
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 171 NDITICDFNLAREDTADAN---KTHYVTHRWYRAPELV------MQ--------FKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp CCEEECCTTC------------------CGGGCCHHHH------TT--------CTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEecCcccccccccc---cceecccceecCcHHh------cC--------CCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 457888 55554443322 4468999999999998 32 245788999999999999999999 9
Q ss_pred cchhhhhhee-eccccccCcchhhcchhhHH------HHHHHHHHH------------hhhcCccchHHHHHhhhhccCC
Q 009274 89 FTKELIDYIR-CVSTKASDDNIACLGMYMAW------MEKVTYLLE------------NKFGSEFVSLQLMFCQCLNFDP 149 (538)
Q Consensus 89 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~~~~~~~~l~~~~~~~l~~~p 149 (538)
|.+....... .+.. ....+... ......... ...+.....+.+++.+||..+|
T Consensus 234 f~~~~~~~~~~~i~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 305 (362)
T 3pg1_A 234 FRGSTFYNQLNKIVE--------VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305 (362)
T ss_dssp CCCSSHHHHHHHHHH--------HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred CCCCCHHHHHHHHHH--------HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCCh
Confidence 9875433111 0000 00000000 000000000 0001122347889999999999
Q ss_pred CCCcchhhHHH
Q 009274 150 GCRPLLTNVWK 160 (538)
Q Consensus 150 ~~r~~~~~~~~ 160 (538)
.+||++.++.+
T Consensus 306 ~~Rpt~~ell~ 316 (362)
T 3pg1_A 306 QRRISTEQALR 316 (362)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHHc
Confidence 99999887665
No 445
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.18 E-value=8.5e-12 Score=121.61 Aligned_cols=134 Identities=21% Similarity=0.248 Sum_probs=74.1
Q ss_pred eeeeec--cccccccccchh--------hhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhh
Q 009274 12 SVAKVG--CVGSRICDKEVG--------LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILL 81 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~ 81 (538)
+..|+. |+++.+...... ......+||+.|||||++ .+ ...++.++|||||||+||
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~ 214 (353)
T 2b9h_A 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM------LT--------SAKYSRAMDVWSCGCILA 214 (353)
T ss_dssp CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHH------HS--------CCCCCHHHHHHHHHHHHH
T ss_pred CcEEEEecccccccccccccccCccccccchhhccccccccCCeee------cc--------CCCccchhhHHHHHHHHH
Confidence 457888 556655432211 013347899999999998 22 245788999999999999
Q ss_pred hhhhcC-ccchhhhhhee-e----ccccccCcchhhcchhhHHHHHHHHHH-------HhhhcCccchHHHHHhhhhccC
Q 009274 82 SLLIGE-QFTKELIDYIR-C----VSTKASDDNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFD 148 (538)
Q Consensus 82 ~lltg~-pf~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~ 148 (538)
+|++|+ ||.+....... . ............. ......+.....+ ....+.....+.+++.+||..+
T Consensus 215 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 293 (353)
T 2b9h_A 215 ELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI-ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293 (353)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTC-CCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSS
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcccccc-ccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcC
Confidence 999999 99875432111 0 0000000000000 0000001000000 0001122334788999999999
Q ss_pred CCCCcchhhHHH
Q 009274 149 PGCRPLLTNVWK 160 (538)
Q Consensus 149 p~~r~~~~~~~~ 160 (538)
|.+||++.++.+
T Consensus 294 P~~Rpt~~ell~ 305 (353)
T 2b9h_A 294 PAKRITAKEALE 305 (353)
T ss_dssp GGGSCCHHHHHT
T ss_pred cccCCCHHHHhc
Confidence 999999888765
No 446
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.18 E-value=1.1e-08 Score=109.83 Aligned_cols=233 Identities=12% Similarity=-0.038 Sum_probs=140.7
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCCC----cEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc---
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSGG----GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~--- 363 (538)
|...+..++|+|++..++++.+.+| .|++||+.++...... ... ......+|++| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~--~~~----~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE--LKW----VKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE--EEE----EESCCCEESTT-SEEEEEECCCC---
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc--CCC----ceeccEEEECC-CEEEEEEecCcccc
Confidence 3346889999998776666655444 5999999877542210 000 11123478999 98888776654
Q ss_pred -----------EEEEECCCCce----eEEecCCCCCeEEEEEe--CCEEEEEecCC-----cEEEEECCCC--ceeEEEe
Q 009274 364 -----------IKAWSLLDGTL----SCTMSGHKSAVSTLAVC--NGVLYSGSRDG-----TIRLWSLSDH--SLLTVLE 419 (538)
Q Consensus 364 -----------i~iwd~~~~~~----~~~~~~h~~~v~~l~~~--~~~l~s~s~dg-----~i~iwd~~~~--~~~~~~~ 419 (538)
|++|++.++.. +.....+...+.++.|+ +++|+..+.++ .|++||+.++ +....+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 89999987652 22223344468899999 44677666543 8999999877 4144454
Q ss_pred cCCCCceEEEEEEcCCCCEEEEEeCC----CcEEEEeCCc----ceeeeccccceEEEEEe-CCCEEEEEeCCCeEEEEe
Q 009274 420 EDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDK----FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQE 490 (538)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~----~~~~~~~h~~~v~~~~~-~~~~l~sgs~dg~v~iwd 490 (538)
.+.... .. .++++++.|+..+.+ +.|.+||... ....+..+...+..+++ ++.++++...|+..++|.
T Consensus 314 ~~~~~~-~~--~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 314 PDLKAQ-WD--FVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp CSSSSC-EE--EEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEE
T ss_pred CCCCce-EE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEE
Confidence 443333 22 234888888887764 4599999654 23334445556667777 666788888899877775
Q ss_pred cC-CCeeEeeeecCCcccCCCceEEEEE-eCC-EEE-EEE---CCCeEEEEEcC
Q 009274 491 LA-GDEFEEDVIPTGAIPCGSVITALLY-WQG-KLF-VGC---ADRTVKVYYYG 537 (538)
Q Consensus 491 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~-sg~---~dg~v~vw~~~ 537 (538)
+. ++........ +....+..+.+ +++ .++ +.+ ..++|++||+.
T Consensus 391 ~~~~g~~~~~l~~----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 391 FDLDGKPAGAVSL----PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EETTSCEEEECBC----SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EeCCCCceeeccC----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 54 2322222211 11223344433 344 344 322 35789999874
No 447
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.18 E-value=1.1e-11 Score=119.04 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=64.3
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+.+|+. |+++.+..... .....||+.|+|||++.... .....+++++|||||||+||+|++|+ |
T Consensus 162 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~----------~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (318)
T 2dyl_A 162 GQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPD----------PTKPDYDIRADVWSLGISLVELATGQFP 228 (318)
T ss_dssp SCEEECCCTTC-----------------CCTTCCHHHHC------------------CCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEEECCCchhccCCcc---ccccCCCccccChhhccccc----------ccccCCccccchhhHHHHHHHHHhCCCC
Confidence 467888 45555544322 44678999999999982111 01345778999999999999999999 9
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhh---cCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF---GSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+. .. ......... ......+.+++.+||..+|.+||++.++.+
T Consensus 229 f~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 229 YKNCKTDFEVL--------------------TK-VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp TTTCCSHHHHH--------------------HH-HHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCCccHHHH--------------------HH-HhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 9763211 000 00 000000000 011234788999999999999999887665
No 448
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.17 E-value=8.8e-12 Score=119.27 Aligned_cols=104 Identities=20% Similarity=0.313 Sum_probs=71.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
+..|+. |+++...... .....||+.|+|||++. + ....+.++|||||||++|+|++|+ |
T Consensus 177 ~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~------~--------~~~~~~~~Di~slG~il~~l~~g~~p 238 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWIS------R--------HQYHALPATVWSLGILLYDMVCGDIP 238 (312)
T ss_dssp TEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHH------H--------SCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CeEEEEEcchhhhcccCc----ccccCCcccccCceeee------c--------CCCCCccchHHHHHHHHHHHHHCCCC
Confidence 467888 5566665443 45688999999999982 1 122345899999999999999999 9
Q ss_pred cchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|......... ....+ ......+.+++.+||..+|.+||++.++.+
T Consensus 239 f~~~~~~~~~------------~~~~~---------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 239 FERDQEILEA------------ELHFP---------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CCSHHHHHHT------------CCCCC---------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCChHHHhhh------------ccCCc---------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9764322000 00000 001123678999999999999999888765
No 449
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.16 E-value=9.2e-09 Score=108.89 Aligned_cols=270 Identities=11% Similarity=0.090 Sum_probs=169.6
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcC----------e-EEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK----------V-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 260 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
..++.++.++.++.|..+|..+|+.+..+..+... + ..+++. +..++.++.|+.|..+|..+++..
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE---CCEEEEEccCCEEEEEECCCCCEe
Confidence 34788888888999999999999999998654321 1 112231 336678888999999999988765
Q ss_pred cceeee-cccCCceeeeEEEEeecCCEEEEee------CCCcEEEEECCCCceeEEecCCC-------------------
Q 009274 329 EPLKKW-NEEKDWRYSGIHALTTSGRYLYTGS------GDRTIKAWSLLDGTLSCTMSGHK------------------- 382 (538)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~h~------------------- 382 (538)
...... ........... -.-. +..+++++ .+|.|+.||.++|+.++.+....
T Consensus 145 W~~~~~~~~~~~~~~~~s-P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGA-PRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEECCSCTTSCCBCCSC-CEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred eeecCcCCCCCCccccCC-cEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 444332 11000000000 0111 44555554 36899999999999998875210
Q ss_pred ------------CCeEEEEEe--CCEEEEEecCCc-------------------EEEEECCCCceeEEEecCCCC-----
Q 009274 383 ------------SAVSTLAVC--NGVLYSGSRDGT-------------------IRLWSLSDHSLLTVLEEDSSG----- 424 (538)
Q Consensus 383 ------------~~v~~l~~~--~~~l~s~s~dg~-------------------i~iwd~~~~~~~~~~~~~~~~----- 424 (538)
.....++++ .++++.++.++. |..+|.++|+.+..+...+..
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 001246666 568888887763 999999999999888753211
Q ss_pred --ceEEEEEEcCCCC---EEEEEeCCCcEEEEeCC--cceeeecc-------c---------------------cce---
Q 009274 425 --AVSSVLSLTAVQH---TLVVSHESGSIKVWRND--KFMKSMQT-------H---------------------KGS--- 466 (538)
Q Consensus 425 --~~~~~~~~~~~~~---~l~~~~~dg~i~iwd~~--~~~~~~~~-------h---------------------~~~--- 466 (538)
..........+|+ .++.++.+|.++++|.. +.+..... + ...
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1111122333554 78899999999999943 33321110 0 000
Q ss_pred ----------EEEEEeCCCEEEEEeC---------------------------------------------CCeEEEEec
Q 009274 467 ----------VFAVFLEGKWLFTGGW---------------------------------------------DKTVSVQEL 491 (538)
Q Consensus 467 ----------v~~~~~~~~~l~sgs~---------------------------------------------dg~v~iwd~ 491 (538)
-.+++++..++++... +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 0234445566665421 478999999
Q ss_pred CCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcCC
Q 009274 492 AGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYGK 538 (538)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~~ 538 (538)
.+++............. ..+...++.+++|+.||.++.||..+
T Consensus 463 ~tG~~~W~~~~~~~~~~----g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 463 VKQQAAWEVPYVTIFNG----GTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp TTTEEEEEEEESSSCCC----CEEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCCCeEeEccCCCCccC----ccceECCCEEEEECCCCcEEEEECCC
Confidence 99998877665432111 13334578899999999999999753
No 450
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.15 E-value=8.8e-08 Score=94.83 Aligned_cols=233 Identities=12% Similarity=0.130 Sum_probs=144.5
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCC--cEEEEEccCCCCC
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIFVWSFSFPLGH 328 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~ 328 (538)
.....++++ ++++++...++.|++||.++++..........+ . ++|+++++ .+++++.++ .|.+|+.......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCC-cEEEEecCCCceEEEEEcCCCcee
Confidence 467899998 666666667799999999887776665543333 3 88988666 555665544 7888887654332
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE----ecCCCCCe--EEEEEeC--CE-EEEEe
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT----MSGHKSAV--STLAVCN--GV-LYSGS 399 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~----~~~h~~~v--~~l~~~~--~~-l~s~s 399 (538)
..+........ ......++++++..|+++..++.|+.||..++..... ..++...- ..++|++ +. +++-.
T Consensus 208 ~~~g~~~~~~~-~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFS-GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSC-SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhc-CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 22211111011 1112347788555566677789999999987764332 22222222 3899983 44 44555
Q ss_pred cCCcEEEEECCCCceeEEEecCC--C-----------CceEEEEEEcCCCCEEEEEe-CCCcEEEEe-CCcceeeeccc-
Q 009274 400 RDGTIRLWSLSDHSLLTVLEEDS--S-----------GAVSSVLSLTAVQHTLVVSH-ESGSIKVWR-NDKFMKSMQTH- 463 (538)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd-~~~~~~~~~~h- 463 (538)
.++.|+.||.... ...+.... . -....-++++++|+++++-+ .++.|+.|+ ....+..+.++
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCC
Confidence 6788999987643 22332221 0 01133479999999777777 789999999 44444555443
Q ss_pred --------------cceEEEEEe--CCCEEEEEeCCCeEEEEec
Q 009274 464 --------------KGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (538)
Q Consensus 464 --------------~~~v~~~~~--~~~~l~sgs~dg~v~iwd~ 491 (538)
-.....+++ ++.++++-..++.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 123455655 6667777777788887765
No 451
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.14 E-value=1.8e-12 Score=123.45 Aligned_cols=124 Identities=15% Similarity=0.247 Sum_probs=69.2
Q ss_pred eeeeecc--ccccccccc---hhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhc
Q 009274 12 SVAKVGC--VGSRICDKE---VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (538)
Q Consensus 12 ~~~~~~~--~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg 86 (538)
+..|+.+ +++.+.... .........||+.|+|||++... ..+++++|||||||+||+|++|
T Consensus 158 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------------~~~~~~~Di~slG~il~~l~~g 223 (303)
T 2vwi_A 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--------------RGYDFKADIWSFGITAIELATG 223 (303)
T ss_dssp CCEEECCCHHHHHCC---------------CCCTTCCHHHHHHH--------------HCCCTHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccc--------------cCCCchhhHHHHHHHHHHHHhC
Confidence 4578884 444443221 11113457899999999998221 2367899999999999999999
Q ss_pred C-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
+ ||.............+.. ......... ...........+.+++.+||..+|.+||++.++.+
T Consensus 224 ~~pf~~~~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 224 AAPYHKYPPMKVLMLTLQND---------PPSLETGVQ--DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCTTTTSCGGGHHHHHHTSS---------CCCTTC-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCccCchhhHHHHHhccC---------CCccccccc--cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 9 998753331110000000 000000000 00001112234788999999999999999888765
No 452
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.14 E-value=1.9e-11 Score=117.38 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=74.4
Q ss_pred eeeeec--cccccccccch-hhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~- 87 (538)
..+|+. |+++...+... ........||+.|+|||++ .+ ...++.++|||||||+||+|++|+
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~el~~g~~ 223 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL------LS--------PNNYTKAIDMWAAGCIFAEMLTGKT 223 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHH------HC--------TTCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHh------cC--------cccCCchhhhHhHHHHHHHHHhCCC
Confidence 467888 55665543211 1113457889999999998 22 245778999999999999999999
Q ss_pred ccchhhhhheeeccccccCcchhhcchhhHHHHHHHH----HHH-----------hhhcCccchHHHHHhhhhccCCCCC
Q 009274 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY----LLE-----------NKFGSEFVSLQLMFCQCLNFDPGCR 152 (538)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----------~~~~~~~~~l~~~~~~~l~~~p~~r 152 (538)
||.+............. ........+..... ... .........+.+++.+||+.+|.+|
T Consensus 224 pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 297 (320)
T 2i6l_A 224 LFAGAHELEQMQLILES------IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297 (320)
T ss_dssp SSCCSSHHHHHHHHHHH------SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred CCCCCCHHHHHHHHHHh------cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcccc
Confidence 99875433111000000 00000000000000 000 0001123348899999999999999
Q ss_pred cchhhHHH
Q 009274 153 PLLTNVWK 160 (538)
Q Consensus 153 ~~~~~~~~ 160 (538)
|++.++.+
T Consensus 298 pt~~ell~ 305 (320)
T 2i6l_A 298 LTAEEALS 305 (320)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhC
Confidence 99888765
No 453
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.14 E-value=1.1e-11 Score=116.92 Aligned_cols=105 Identities=17% Similarity=0.096 Sum_probs=68.8
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-c
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-p 88 (538)
...|+. |+++...... ...||+.|||||++ .+ ...+++++|||||||++|+|++|. |
T Consensus 171 ~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~~~~~ 230 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVL------QE--------NYTHLPKADIFALALTVVCAAGAEPL 230 (289)
T ss_dssp CCEEECCCTTCEETTCSC------CCCCCGGGCCHHHH------TT--------CCTTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred eEEEEcccccccccCCcc------ccCCCccccChhHh------cC--------CCCCCchhhHHHHHHHHHHHhcCCCC
Confidence 357888 5555554332 35699999999999 33 235668999999999999999999 4
Q ss_pred cchhhhh-heeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
|...... .+.. . . .... .......+.+++.+||..+|.+||++.++.+
T Consensus 231 ~~~~~~~~~~~~-----~-~---~~~~---------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 231 PRNGDQWHEIRQ-----G-R---LPRI---------------PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CSSSHHHHHHHT-----T-C---CCCC---------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CcchhHHHHHHc-----C-C---CCCC---------------CcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 4332111 1110 0 0 0000 0011224778999999999999999887654
No 454
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.13 E-value=1.5e-08 Score=94.26 Aligned_cols=193 Identities=8% Similarity=-0.002 Sum_probs=127.9
Q ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCc
Q 009274 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (538)
..+.+++++ ++.+++.. ++.|.+||....... .+. .....+.++++.+++ .++++...++.|.+|+..+....
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~- 142 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQT- 142 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCE-
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeE-
Confidence 567889998 56555554 889999998765433 333 233678999998855 57777777899999975432211
Q ss_pred ceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C-CEEEEEecCCcEEEE
Q 009274 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-GVLYSGSRDGTIRLW 407 (538)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-~~l~s~s~dg~i~iw 407 (538)
... .........++++++++.+++...++.|.+||............+...+.+++++ + .++++...++.|.+|
T Consensus 143 -~~~---~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 143 -VLP---FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp -ECC---CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred -eec---cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 110 0111112245778888877777778899999987766544433444678899998 4 355555568899999
Q ss_pred ECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc
Q 009274 408 SLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (538)
Q Consensus 408 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 455 (538)
|........ ......... ..++++++|+++++...++.|++++...
T Consensus 219 ~~~~~~~~~-~~~~~~~~p-~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 219 LAGSTTSTV-LPFTGLNTP-LAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CTTCSCCEE-CCCCSCSCE-EEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred cCCCCccee-eccCCCCCc-eeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 987654332 222111223 3468999999888888999999998654
No 455
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.10 E-value=2.3e-09 Score=104.02 Aligned_cols=171 Identities=11% Similarity=0.084 Sum_probs=119.8
Q ss_pred cEEEEEEc--CCEEEEEeCCCcEEEEeCCCCc-----------eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 009274 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----------HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (538)
Q Consensus 254 ~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 320 (538)
+++.++++ .+++++|+.| .+++|++++.+ ..... .+.. |+.++| ++.+++++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 57888888 8889999988 56669865332 11223 3566 999999 45566777 88999999
Q ss_pred EccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEec
Q 009274 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSR 400 (538)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~ 400 (538)
|+.+.........+.. . +..+.+....+++++.||.|.+||+.+++... +...|+|++|+++-++.|..
T Consensus 112 dv~sl~~~~~~~~~~~----~---v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSFEK----P---VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLK 180 (388)
T ss_dssp ESSSTTCEEEEEECSS----C---EEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEET
T ss_pred EchhhhccCccceeec----c---eeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEc
Confidence 9987654333322211 1 22334444458999999999999999887653 34689999999554889999
Q ss_pred CCcEEEEECCCCce--eEEEec--------CCCCceEEEEEEcCCCCEEEEEe
Q 009274 401 DGTIRLWSLSDHSL--LTVLEE--------DSSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 401 dg~i~iwd~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
||++++|+...++. ..++.. .+...+. .+.|.+++.++++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~-sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPL-SVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEE-EEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEE-EEEEecCCeEEEEEc
Confidence 99999999987775 555521 1233344 468888888887643
No 456
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.09 E-value=6.5e-07 Score=87.32 Aligned_cols=242 Identities=8% Similarity=0.018 Sum_probs=151.0
Q ss_pred EEEeecCCCcEEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCceEEEEecC-------CcCeEEEEEecCCC
Q 009274 245 FKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH-------DHKVMAVVYVDEDQ 305 (538)
Q Consensus 245 i~~l~~h~~~V~~l~~~--~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~ 305 (538)
+..+.....+ .++++ +++++.+. .++.|.+||..+.+.+..+... ...-..++|+|+++
T Consensus 60 ~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 60 LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC
Confidence 3444433344 78888 88888875 3678999999998888777532 12345789999877
Q ss_pred CEEEEEcC-CCcEEEEEccCCCCCcc-eeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEEec---
Q 009274 306 PLCISGDS-GGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMS--- 379 (538)
Q Consensus 306 ~~l~s~~~-dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~--- 379 (538)
.++++... ++.|.++| .+++.... +. .. .+..+.+++ +.+++.+.||.+.++|. +++.+....
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~~i~---~~------~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~ 206 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQLLS---SP------TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGA 206 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeEEcC---CC------ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccc
Confidence 66665543 68899999 87643322 11 11 122344554 46677788999999999 887664322
Q ss_pred --CCCCCe-EEEEEe--CCEEEEEecCCcEEEEECCCCce--eEEEecCC---------CCceEEEEEEcCCCCEEEEEe
Q 009274 380 --GHKSAV-STLAVC--NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDS---------SGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 380 --~h~~~v-~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~ 443 (538)
....++ ....+. ++.++..+.++.+.+.|+.+... +..+.... ... ...+.++++++.++++.
T Consensus 207 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 207 MLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLT 285 (373)
T ss_pred cccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEe
Confidence 112222 223333 34444444788999999976532 22222110 111 12257899998888765
Q ss_pred C----------CCcEEEEeCC--cceeeecccc-ceEEEEEeCCC-EEEEEe-CCCeEEEEecCCCeeEeee
Q 009274 444 E----------SGSIKVWRND--KFMKSMQTHK-GSVFAVFLEGK-WLFTGG-WDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 444 ~----------dg~i~iwd~~--~~~~~~~~h~-~~v~~~~~~~~-~l~sgs-~dg~v~iwd~~~~~~~~~~ 500 (538)
. ++.|.++|.. +.+..+.... ..-..+++||+ .++++. .++.|.+||+.+.+.....
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 4 3579999965 3455554322 22234455888 788877 4899999999998876553
No 457
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.09 E-value=4.4e-09 Score=102.03 Aligned_cols=170 Identities=12% Similarity=0.043 Sum_probs=120.4
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC--------CCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEE
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL--------GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 365 (538)
+++.+++++..+ ++++|+.+ .+.+|++.... ......... .. . +..+..++++|+++ .++.|+
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~--lp-~---V~~l~fd~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE--IP-D---VIFVCFHGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE--CT-T---EEEEEEETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee--CC-C---eeEEEECCCEEEEE-cCCcEE
Confidence 688999988555 66777776 55669876432 011101111 11 1 33333388999998 889999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCC
Q 009274 366 AWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (538)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 445 (538)
+||+++.........|...+.++.+....+++++.||.|.+||+.++.... + ... ..+++|+|+| ++.|..|
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~----~~~-Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L----AQN-VTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E----EES-EEEEEECSSE--EEEEETT
T ss_pred EEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c----cCC-ceEEEEcCCc--eEEEEcC
Confidence 999988777667777888899988885569999999999999999887653 2 122 3447999999 7889999
Q ss_pred CcEEEEeCCc-c---eeee------c---cccceEEEEEe--CCCEEEEE
Q 009274 446 GSIKVWRNDK-F---MKSM------Q---THKGSVFAVFL--EGKWLFTG 480 (538)
Q Consensus 446 g~i~iwd~~~-~---~~~~------~---~h~~~v~~~~~--~~~~l~sg 480 (538)
|++++|+... . ...+ . +|...|.++.| ++.++++=
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999998432 2 3344 2 37789999999 66666653
No 458
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.09 E-value=7.5e-07 Score=88.11 Aligned_cols=236 Identities=9% Similarity=0.045 Sum_probs=148.7
Q ss_pred cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCC--cEEEEECC
Q 009274 293 HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR--TIKAWSLL 370 (538)
Q Consensus 293 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~iwd~~ 370 (538)
.....++|.+++. ++++...++.|+.||..++....... .. .... .+++++++.++++..++ .|..||..
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~----~~--~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHP----GF--KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEE----TC--CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeec----cC--CCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3578899987554 77777788999999987543221111 11 1112 58899999888888766 79999987
Q ss_pred CCceeEEe----cCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEE---ecCCCCce-EEEEEEcCC-CCEE
Q 009274 371 DGTLSCTM----SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVL---EEDSSGAV-SSVLSLTAV-QHTL 439 (538)
Q Consensus 371 ~~~~~~~~----~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~~~~~-~~~~~~~~~-~~~l 439 (538)
.+.....+ ......+.+++++ ++.|+.+..++.|+.||..++...... ........ ..-++++|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 66544443 2245667889998 457777888899999999877643220 11111111 113789995 5555
Q ss_pred EEEeCCCcEEEEeCCcceeeecccc---------------ceEEEEEe--CCCEEEEEe-CCCeEEEEecCCCeeEeeee
Q 009274 440 VVSHESGSIKVWRNDKFMKSMQTHK---------------GSVFAVFL--EGKWLFTGG-WDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 440 ~~~~~dg~i~iwd~~~~~~~~~~h~---------------~~v~~~~~--~~~~l~sgs-~dg~v~iwd~~~~~~~~~~~ 501 (538)
++-..++.|+.|+.......+.++. .....+++ +|+++++-+ .++.|+.|++.++.......
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 5666788999998654444443332 22455555 788777777 78999999987777554433
Q ss_pred cCCcc----------cCCCceEEEEEeCCEEEEE-ECCCeEEEEEc
Q 009274 502 PTGAI----------PCGSVITALLYWQGKLFVG-CADRTVKVYYY 536 (538)
Q Consensus 502 ~~~~~----------~~~~~~~~~~~~~~~l~sg-~~dg~v~vw~~ 536 (538)
..... ....+......+++.|+++ ..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 21100 0122333344456776654 56778888765
No 459
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.07 E-value=2.9e-11 Score=117.55 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=73.2
Q ss_pred eeeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccc-cCcchhhhhhhhhhhhcC-
Q 009274 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGY-GSDVWPVACILLSLLIGE- 87 (538)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~-~sDi~slG~~l~~lltg~- 87 (538)
+..|+. |+++...... .....||+.|+|||++ .+ ...++. ++|||||||++|+|++|+
T Consensus 189 ~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~------~~--------~~~~~~~~~Di~slG~il~~l~~g~~ 250 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFF------SN--------ESSYNGAKVDIWSLGICLYVMFYNVV 250 (348)
T ss_dssp SCEEECCCTTCEECBTTE----ECSSCSCGGGCCGGGG------SS--------CCCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred CcEEEecccccccccccc----ccCCCCCcCccCchhh------cC--------CCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 457888 4555554432 4568999999999998 43 114445 899999999999999999
Q ss_pred ccchhhh-hhee-ec-----cccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 88 QFTKELI-DYIR-CV-----STKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 88 pf~~~~~-~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
||..... ..+. .+ ........ ....... . .. ..........+.+++.+||..+|.+||++.++.+
T Consensus 251 pf~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~--~-~~---~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 251 PFSLKISLVELFNNIRTKNIEYPLDRNH--FLYPLTN--K-KS---TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SSCCSSCSHHHHHHHTSCCCCCCCSSSS--STTTTCC--------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCCCcHHHHHHHHhccCcCCccchhh--hhccccc--c-cc---ccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 9986533 1111 00 00000000 0000000 0 00 0000112234788999999999999999887655
No 460
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=9.1e-07 Score=83.19 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=142.7
Q ss_pred eecCCCcEEEEEEc--CCEEEEEeCCCcEEEEeCCCCceEEE-EecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 009274 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT-FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 248 l~~h~~~V~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (538)
+..+...+.+++++ ++.+++...++.|..||.. ++.... +......+.++++.++ +.++++...++.|..+|..
T Consensus 57 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 57 VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-
T ss_pred CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-
Confidence 33445678899997 6666666667899999987 554322 2224467889999874 4576777768889999875
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CC-EEEEEecC
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NG-VLYSGSRD 401 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~-~l~s~s~d 401 (538)
+... ..............++.++++..++...++.|..+|. +++.... ...+...+.+++++ ++ +.++....
T Consensus 134 g~~~----~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 134 GTIY----EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp SCEE----EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CCEE----EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCC
Confidence 2211 1111111112234466778886666666789999998 5554432 23345678899998 44 44444456
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCcceeee--ccccceEEEEEe--CCCEE
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL--EGKWL 477 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~h~~~v~~~~~--~~~~l 477 (538)
+.|..||. +++............ ...++++++|++.++...++.|..||.......+ ......+.++.. +|++.
T Consensus 209 ~~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 209 NKIGRITT-TGEISEYDIPTPNAR-PHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVW 286 (300)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCC-EEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred CEEEEEcC-CCcEEEEECCCCCCC-ceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEE
Confidence 78999998 555443322211222 3346899999877766667899999965433333 222344555655 56655
Q ss_pred EEEeCCCeEEEEecC
Q 009274 478 FTGGWDKTVSVQELA 492 (538)
Q Consensus 478 ~sgs~dg~v~iwd~~ 492 (538)
++.. + .|..+|.+
T Consensus 287 v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 287 FALK-C-KIGKLNLN 299 (300)
T ss_dssp EECS-S-EEEEEEEC
T ss_pred EEcc-C-ceEEeCCC
Confidence 5444 4 77777653
No 461
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.06 E-value=2e-11 Score=116.10 Aligned_cols=95 Identities=14% Similarity=0.236 Sum_probs=54.9
Q ss_pred hhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcCccchhhh-hhee-eccccccCcch
Q 009274 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGEQFTKELI-DYIR-CVSTKASDDNI 109 (538)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~pf~~~~~-~~~~-~~~~~~~~~~~ 109 (538)
.....||+.|||||++ .+ ...++.++|||||||++|+|++ ||..... ..+. .+. ..
T Consensus 187 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~--p~~~~~~~~~~~~~~~--~~---- 244 (303)
T 1zy4_A 187 LTSAIGTAMYVATEVL------DG--------TGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLR--SV---- 244 (303)
T ss_dssp -------CTTSCHHHH------TS--------CSCCCTHHHHHHHHHHHHHHHS--CCSSHHHHHHHHHHHH--ST----
T ss_pred cccCCCcccccCcccc------cC--------CCCCcchhhHHHHHHHHHHHHh--ccCCchhHHHHHHhcc--cc----
Confidence 3468899999999998 33 2457899999999999999999 4432111 1000 000 00
Q ss_pred hhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchhhHHH
Q 009274 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~~~~~ 160 (538)
....+ ..........+.+++.+||..+|.+||++.++.+
T Consensus 245 -~~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 245 -SIEFP-----------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -TCCCC-----------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -ccccC-----------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 00000 0000111123678999999999999999888765
No 462
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=1.3e-09 Score=104.81 Aligned_cols=269 Identities=13% Similarity=0.048 Sum_probs=159.3
Q ss_pred EEEEEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEE
Q 009274 243 VKFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (538)
Q Consensus 243 ~~i~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 321 (538)
..+|.+..+.....+.... ++.+..++.++.|..|| .+++....+..+...+.++...+ ++ .+..++.+ +..+|
T Consensus 10 ~~~W~~~~~~~~~~~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-~g-~l~v~t~~--l~~~d 84 (330)
T 3hxj_A 10 KIKWEFLIGNSIDSSPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGK-DG-TIYFGSDK--VYAIN 84 (330)
T ss_dssp --CCTTTSCEEECCCCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETT-TT-EECCSSCE--EEEEC
T ss_pred eEEEEEeCCCCcccCceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEec-CC-cEEEecCc--EEEEC
Confidence 3455555444444455664 67788888888999999 88887766554444455565543 23 34555544 77777
Q ss_pred ccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEec
Q 009274 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSR 400 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~ 400 (538)
. +++....... ... ......+. +..+..++.++.|..+|.. ++.......+...+.++... ++.++.++.
T Consensus 85 ~-~g~~~~~~~~---~~~--~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~ 155 (330)
T 3hxj_A 85 P-DGTEKWRFDT---KKA--IVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSN 155 (330)
T ss_dssp C-CGGGGGGSCC----------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECT
T ss_pred C-CCcEEEEEEC---CCC--cccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcC
Confidence 4 3222211111 110 11111222 5678888888999999988 77777776555666677776 667888888
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-cceeeeccccceEEEEEeCC-CEEE
Q 009274 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVFLEG-KWLF 478 (538)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~h~~~v~~~~~~~-~~l~ 478 (538)
++.|..+|.. ++....+..... . ...+...+++.+.+ ++ +.+..+|.. +...........+.++..+. ..|.
T Consensus 156 ~~~l~~~d~~-g~~~~~~~~~~~-~-~~~~~~d~~g~l~v-~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 156 DNYLYAINPD-GTEKWRFKTNDA-I-TSAASIGKDGTIYF-GS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIY 229 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSSC-C-CSCCEECTTCCEEE-ES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEE
T ss_pred CCEEEEECCC-CCEeEEEecCCC-c-eeeeEEcCCCEEEE-Ee--CEEEEECCCCcEEEEEccCCcceeceEECCCCeEE
Confidence 8999999998 777666654322 1 22245556666444 44 788888832 33334444444555666543 3677
Q ss_pred EEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEc
Q 009274 479 TGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 479 sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~ 536 (538)
.++.++.+..+|..+... .......... ...+...++.+++++.+|.|..++-
T Consensus 230 v~t~~~gl~~~~~~g~~~-~~~~~~~~~~----~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 230 VTSLDGHLYAINPDGTEK-WRFKTGKRIE----SSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EEETTTEEEEECTTSCEE-EEEECSSCCC----SCCEECTTSCEEEECTTCEEEEECT
T ss_pred EEcCCCeEEEECCCCCEe-EEeeCCCCcc----ccceEcCCCeEEEecCCCCEEEECC
Confidence 777888888888644433 3322221111 1112223677888888887877763
No 463
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.05 E-value=2.2e-07 Score=97.97 Aligned_cols=269 Identities=13% Similarity=0.083 Sum_probs=164.6
Q ss_pred eeEEeecCCeEEEEEeecCCCc----------E-EEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCC----cCeEE
Q 009274 233 DLVNGLSKGNVKFKDLQGHRDC----------V-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD----HKVMA 297 (538)
Q Consensus 233 ~~~~~~~~~~~~i~~l~~h~~~----------V-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~----~~v~~ 297 (538)
.++.-.......+|.+...... + ..+++.++.++.++.|+.|..+|..+|+.+..+.... ..+.+
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~ 156 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITG 156 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCS
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecC
Confidence 3333333444557877543221 1 2345567888999999999999999999998887531 11111
Q ss_pred -EEEecCCCCEEEEEcC------CCcEEEEEccCCCCCcceeeecccCC--------------------------ceeee
Q 009274 298 -VVYVDEDQPLCISGDS------GGGIFVWSFSFPLGHEPLKKWNEEKD--------------------------WRYSG 344 (538)
Q Consensus 298 -l~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~--------------------------~~~~~ 344 (538)
.... ++ .++.+.. +|.|..+|..+++............. .....
T Consensus 157 ~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~ 233 (668)
T 1kv9_A 157 APRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWD 233 (668)
T ss_dssp CCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCS
T ss_pred CCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCcccc
Confidence 1111 33 3344432 58999999988765544332110000 00011
Q ss_pred EEEEeecCCEEEEeeCCC-------------------cEEEEECCCCceeEEecC--CC-------CCeEE--EEEeCC-
Q 009274 345 IHALTTSGRYLYTGSGDR-------------------TIKAWSLLDGTLSCTMSG--HK-------SAVST--LAVCNG- 393 (538)
Q Consensus 345 ~~~~~~~~~~l~sg~~dg-------------------~i~iwd~~~~~~~~~~~~--h~-------~~v~~--l~~~~~- 393 (538)
..++.++.+.++.++.++ .|..+|..+|+.++.++. |. .+... +.+.++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 246667778888887766 399999999999998864 22 22222 223332
Q ss_pred --EEEEEecCCcEEEEECCCCceeEEEecCCCCceE----------------------------------EEEEEcCCCC
Q 009274 394 --VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVS----------------------------------SVLSLTAVQH 437 (538)
Q Consensus 394 --~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~ 437 (538)
.++.++.+|.++++|..+|+.+............ ..++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 6889999999999999999988554332100000 0136677666
Q ss_pred EEEEEe------------------------------------CCCcEEEEeCCc--ceeeeccccceE-EEEEeCCCEEE
Q 009274 438 TLVVSH------------------------------------ESGSIKVWRNDK--FMKSMQTHKGSV-FAVFLEGKWLF 478 (538)
Q Consensus 438 ~l~~~~------------------------------------~dg~i~iwd~~~--~~~~~~~h~~~v-~~~~~~~~~l~ 478 (538)
.+++.. .+|.|..||..+ .+.....+.... ..+...+.+++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE
Confidence 665421 237788899544 333333222211 23445788999
Q ss_pred EEeCCCeEEEEecCCCeeEeeeecCC
Q 009274 479 TGGWDKTVSVQELAGDEFEEDVIPTG 504 (538)
Q Consensus 479 sgs~dg~v~iwd~~~~~~~~~~~~~~ 504 (538)
.++.||.+++||.++++.........
T Consensus 474 ~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EECCcccchhhhhhcChhheEecCCC
Confidence 99999999999999999877766543
No 464
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.03 E-value=6.3e-09 Score=99.87 Aligned_cols=267 Identities=12% Similarity=0.115 Sum_probs=163.4
Q ss_pred EEEEeecCCCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 244 KFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 244 ~i~~l~~h~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
.+|....+...+.++... +..+..++.+ +..+|. +++.+..+..+.......... +..+..++.++.+..+|.
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~ 124 (330)
T 3hxj_A 51 VKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF---EDILYVTSMDGHLYAINT 124 (330)
T ss_dssp EEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE---TTEEEEECTTSEEEEECT
T ss_pred EEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE---CCEEEEEecCCEEEEEcC
Confidence 356665555666778886 6777777666 888886 666554443333222233333 335677888899999987
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEecC
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRD 401 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~d 401 (538)
. +....... .... .........++ .++.++.++.|..+|.. ++....+......+.++... ++.+..++
T Consensus 125 ~-g~~~~~~~---~~~~--~~~~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t-- 194 (330)
T 3hxj_A 125 D-GTEKWRFK---TKKA--IYATPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS-- 194 (330)
T ss_dssp T-SCEEEEEE---CSSC--CCSCCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--
T ss_pred C-CCEEEEEc---CCCc--eeeeeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--
Confidence 6 33221111 1111 11112333344 46778888999999998 88877776666677778775 66666666
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC-CcceeeeccccceEEEEEeC-CCEEEE
Q 009274 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN-DKFMKSMQTHKGSVFAVFLE-GKWLFT 479 (538)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~h~~~v~~~~~~-~~~l~s 479 (538)
+.|..+| .+++.......... .+ ..+...+++. +..++.++.+..+|. ++....+......+.++..+ +..|..
T Consensus 195 ~~l~~~d-~~g~~~~~~~~~~~-~~-~~~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v 270 (330)
T 3hxj_A 195 DKVYAIN-PDGTEKWNFYAGYW-TV-TRPAISEDGT-IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYF 270 (330)
T ss_dssp SSEEEEC-TTSCEEEEECCSSC-CC-SCCEECTTSC-EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEE
T ss_pred CEEEEEC-CCCcEEEEEccCCc-ce-eceEECCCCe-EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEE
Confidence 8899999 77777666654321 22 2245666665 556777888888884 33334443333323334443 667888
Q ss_pred EeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCEEEEEECCCeEEEEEc
Q 009274 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 480 gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~v~vw~~ 536 (538)
++.+|.+..+|. +++........ ...+..+.. .++.|+.|+.+|.+++...
T Consensus 271 ~t~~ggl~~~d~-~g~~~~~~~~~-----~~~~~~~~~d~~g~l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 271 GSYDGHLYAINP-DGTEKWNFETG-----SWIIATPVIDENGTIYFGTRNGKFYALFN 322 (330)
T ss_dssp ECTTCEEEEECT-TSCEEEEEECS-----SCCCSCCEECTTCCEEEECTTSCEEEEEC
T ss_pred ecCCCCEEEECC-CCcEEEEEEcC-----CccccceEEcCCCEEEEEcCCCeEEEEec
Confidence 888999999996 45444433321 122333344 6888999999999998764
No 465
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.03 E-value=1.9e-11 Score=126.50 Aligned_cols=62 Identities=18% Similarity=0.351 Sum_probs=49.8
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++....... .....||+.|+|||++ .+ ..+++++|||||||++|+|++|. ||
T Consensus 162 ~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l------~~---------~~~s~ksDIwSLGviLyeLltG~~Pf 223 (676)
T 3qa8_A 162 IHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELL------EQ---------KKYTVTVDYWSFGTLAFECITGFRPF 223 (676)
T ss_dssp EEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSS------CC---------SCCSTTHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEEcccccccccccccc---cccccCCcccCChHHh------cc---------CCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 47888 56666654432 4568999999999998 44 67889999999999999999999 99
Q ss_pred chh
Q 009274 90 TKE 92 (538)
Q Consensus 90 ~~~ 92 (538)
.+.
T Consensus 224 ~~~ 226 (676)
T 3qa8_A 224 LPN 226 (676)
T ss_dssp CSS
T ss_pred Ccc
Confidence 753
No 466
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=3.6e-07 Score=88.20 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=156.7
Q ss_pred eEEEEEeecCCCcEEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCceEEEEecCC-------cCeEEEEEec
Q 009274 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGHD-------HKVMAVVYVD 302 (538)
Q Consensus 242 ~~~i~~l~~h~~~V~~l~~~--~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~~~ 302 (538)
...+..+..-..+ . ++++ +++++.++ .++.|.+||..+++.+.++.... ..-..++++|
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 3344555544455 3 8888 77777765 36789999999999998886422 2345789999
Q ss_pred CCCCEEEEEc-CCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCC-CceeEEecC
Q 009274 303 EDQPLCISGD-SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-GTLSCTMSG 380 (538)
Q Consensus 303 ~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~ 380 (538)
++..++++.. .++.|.++|+.+.+....+.... ....+....+.+++.+.||.+.+.++.+ ++.......
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--------~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~ 218 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--------CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 218 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--------EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--------cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc
Confidence 8876666654 37899999998765444432210 0112233455777888899999999876 554332211
Q ss_pred C----CCCeE-EEEEe--CCEEEEEecCCcEEEEECCCCc--eeEEEec---------CCCCceEEEEEEcCCCCEEEEE
Q 009274 381 H----KSAVS-TLAVC--NGVLYSGSRDGTIRLWSLSDHS--LLTVLEE---------DSSGAVSSVLSLTAVQHTLVVS 442 (538)
Q Consensus 381 h----~~~v~-~l~~~--~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~ 442 (538)
+ ..++. ...|. ++.++..+.+|.+++.|+.+.. ....+.. -..+... .+.++++++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV~ 297 (386)
T 3sjl_D 219 VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYLL 297 (386)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEEE
T ss_pred eeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEEE
Confidence 1 12222 24554 5555557778999999997664 2332220 0011111 15778999888886
Q ss_pred eC----------CCcEEEEeCC--cceeeeccccceEEEE--EeCCC-EEEEEe-CCCeEEEEecCCCeeEeeeecC
Q 009274 443 HE----------SGSIKVWRND--KFMKSMQTHKGSVFAV--FLEGK-WLFTGG-WDKTVSVQELAGDEFEEDVIPT 503 (538)
Q Consensus 443 ~~----------dg~i~iwd~~--~~~~~~~~h~~~v~~~--~~~~~-~l~sgs-~dg~v~iwd~~~~~~~~~~~~~ 503 (538)
.. .+.|.++|.. +.+..+..- ..+.++ ++|++ +|++.. .++.|.++|..+++........
T Consensus 298 ~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 298 VDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred eccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 53 2568888954 455555432 234444 45876 666654 5899999999999877665543
No 467
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.99 E-value=1.1e-10 Score=123.78 Aligned_cols=101 Identities=17% Similarity=0.099 Sum_probs=69.0
Q ss_pred eeeec--cccccccccchhhhhhhccccccccChHHHHHHHhhcCceeeeccccccccccCcchhhhhhhhhhhhcC-cc
Q 009274 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (538)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDi~slG~~l~~lltg~-pf 89 (538)
..|+. |+++.+... ...+||+.|||||++ .+ .++.++|||||||+||+|++|. ||
T Consensus 219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~------~~----------~~~~~sDi~slG~~l~~l~~g~~~~ 276 (681)
T 2pzi_A 219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIV------RT----------GPTVATDIYTVGRTLAALTLDLPTR 276 (681)
T ss_dssp CEEECCCTTCEETTCC------SCCCCCTTTSCTTHH------HH----------CSCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cEEEEecccchhcccC------CccCCCccccCHHHH------cC----------CCCCceehhhhHHHHHHHHhCCCCC
Confidence 56888 566665543 357899999999998 22 2368999999999999999999 88
Q ss_pred chhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhccCCCCCcchh-hHHHHH
Q 009274 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT-NVWKCI 162 (538)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~r~~~~-~~~~~l 162 (538)
.+..... ...... ..... ..+.+++.+||..+|.+||+.. ++...+
T Consensus 277 ~~~~~~~--------------~~~~~~-----~~~~~--------~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 277 NGRYVDG--------------LPEDDP-----VLKTY--------DSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp TTEECSS--------------CCTTCH-----HHHHC--------HHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred ccccccc--------------cccccc-----ccccC--------HHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 7643220 000000 01111 1377899999999999999854 343333
No 468
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1.5e-07 Score=99.35 Aligned_cols=269 Identities=13% Similarity=0.077 Sum_probs=167.1
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcC----------e-EEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK----------V-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 260 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
..++.++.++.++.|..+|..+|+.+..+...... + ..+++. +..++.++.|+.|..+|..+++..
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEe
Confidence 34788888888999999999999999988643221 0 122332 235677888999999999988765
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeC------CCcEEEEECCCCceeEEecCCC---C----------------
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHK---S---------------- 383 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~---~---------------- 383 (538)
.................-. ..+..+++++. +|.|+.+|..+|+.++.+.... .
T Consensus 141 W~~~~~~~~~~~~~~~~P~--v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPR--VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp EEEECSCTTSSCBCCSCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred eeeccCCCCCcceecCCCE--EECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 4443321111100000001 12445666543 5899999999999998875211 0
Q ss_pred ------------CeEEEEEe--CCEEEEEecCC-------------------cEEEEECCCCceeEEEecCCCC------
Q 009274 384 ------------AVSTLAVC--NGVLYSGSRDG-------------------TIRLWSLSDHSLLTVLEEDSSG------ 424 (538)
Q Consensus 384 ------------~v~~l~~~--~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~~~~------ 424 (538)
....++++ .+.++.++.++ .|..+|.++|+.+..+...+..
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred ccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccC
Confidence 01235665 56888887766 3999999999999888753211
Q ss_pred -ceEEEEEEcCCCC---EEEEEeCCCcEEEEeC--Ccceeeecccc------------ceE-------------------
Q 009274 425 -AVSSVLSLTAVQH---TLVVSHESGSIKVWRN--DKFMKSMQTHK------------GSV------------------- 467 (538)
Q Consensus 425 -~~~~~~~~~~~~~---~l~~~~~dg~i~iwd~--~~~~~~~~~h~------------~~v------------------- 467 (538)
.......+..+|+ .++.++.+|.++++|. ++.+....... .++
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~ 378 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPF 378 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTT
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCc
Confidence 1111123334665 6888999999999994 34432211110 000
Q ss_pred -------EEEEeCCCEEEEE------------------------------------eCCCeEEEEecCCCeeEeeeecCC
Q 009274 468 -------FAVFLEGKWLFTG------------------------------------GWDKTVSVQELAGDEFEEDVIPTG 504 (538)
Q Consensus 468 -------~~~~~~~~~l~sg------------------------------------s~dg~v~iwd~~~~~~~~~~~~~~ 504 (538)
.+++++...++.. ..+|.|..||+.+++.........
T Consensus 379 G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~ 458 (668)
T 1kv9_A 379 GAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT 458 (668)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS
T ss_pred cccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC
Confidence 2333333444331 134889999999999877665432
Q ss_pred cccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 505 AIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 505 ~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.. .-..+...++.+++|+.||.|+.||..
T Consensus 459 ~~----~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 459 HW----NGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp SC----CCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CC----cCceeEeCCCEEEEECCcccchhhhhh
Confidence 21 112334458889999999999999864
No 469
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.97 E-value=1.7e-10 Score=112.94 Aligned_cols=182 Identities=12% Similarity=0.040 Sum_probs=101.9
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-
Q 009274 305 QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS- 383 (538)
Q Consensus 305 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~- 383 (538)
+..+++++.||.|+.||..+++....... ... . ...+..++..+++++.||.|+.||..+++.+..+..+..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~---~---s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPV---L---QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCS---C---CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCc---e---ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 45778899999999999998876544433 110 1 112334566788888999999999999988777654321
Q ss_pred Ce-EEEEE-eCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC--cceee
Q 009274 384 AV-STLAV-CNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKS 459 (538)
Q Consensus 384 ~v-~~l~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~ 459 (538)
.+ .+..+ .++.+++++.|+.++.||.++|+.+..+..+.. ..++|++..+++++.|+.|+.||.. +.+..
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~------~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA------DSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc------ccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 11 11122 366888899999999999999998877765421 2445688899999999999999954 33333
Q ss_pred eccccceEEEEEeCC-----CEEEEEeCCCeEEEEecCCCeeEeeee
Q 009274 460 MQTHKGSVFAVFLEG-----KWLFTGGWDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 460 ~~~h~~~v~~~~~~~-----~~l~sgs~dg~v~iwd~~~~~~~~~~~ 501 (538)
+..+. ......++ ..+++++.||.++.||..+++..+...
T Consensus 156 ~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 156 ATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred Eeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 33221 11222232 567888999999999999998877655
No 470
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=1e-07 Score=101.44 Aligned_cols=242 Identities=13% Similarity=0.084 Sum_probs=144.8
Q ss_pred cCCCcEEEEEEc--CCEEEE-----EeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCC--------
Q 009274 250 GHRDCVTGLAVG--GGFLFS-----SSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG-------- 314 (538)
Q Consensus 250 ~h~~~V~~l~~~--~~~l~s-----~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-------- 314 (538)
+|...+..++|+ |++|+- |+.+.+|++||+++++.+... .+......++|+ +++.++++...+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 466678888998 787774 333357999999999865431 111113567899 776555444332
Q ss_pred ----CcEEEEEccCCCCCcceeeecccC-CceeeeEEEEeecCCEEEEeeC----CCcEEEEECCCCc-eeEEecCCCCC
Q 009274 315 ----GGIFVWSFSFPLGHEPLKKWNEEK-DWRYSGIHALTTSGRYLYTGSG----DRTIKAWSLLDGT-LSCTMSGHKSA 384 (538)
Q Consensus 315 ----g~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~sg~~----dg~i~iwd~~~~~-~~~~~~~h~~~ 384 (538)
..|++|++.++....... +.... .........+++||++|+.... +..|+++|+.++. ....+..+...
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v-~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLV-FGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEE-ESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred cCCCcEEEEEECCCCcccceEE-EecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 249999988764322221 11111 0111223478999997754432 3589999998764 34555556665
Q ss_pred eEEEEEe-CCEE-EEEecC---CcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEeCCC---cEEEEeCC
Q 009274 385 VSTLAVC-NGVL-YSGSRD---GTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG---SIKVWRND 454 (538)
Q Consensus 385 v~~l~~~-~~~l-~s~s~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~ 454 (538)
....... ++.| +....+ +.|..+|+.++.. ...+..+.... . .++++++.|+....++ .|++||..
T Consensus 283 ~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~---~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 283 DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-L---TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-E---EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-E---EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 5554333 5544 444443 6799999988754 34454443332 2 7888888887766544 68888864
Q ss_pred c-ceeeecc-ccceEEEEEe--CCCEEEEEeCC----CeEEEEecCCCeeEe
Q 009274 455 K-FMKSMQT-HKGSVFAVFL--EGKWLFTGGWD----KTVSVQELAGDEFEE 498 (538)
Q Consensus 455 ~-~~~~~~~-h~~~v~~~~~--~~~~l~sgs~d----g~v~iwd~~~~~~~~ 498 (538)
. ....+.. ..+.+..+++ +++.++....+ +.++.||+.+++...
T Consensus 359 g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 359 GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 3 3334432 3345555554 56655544444 889999998776443
No 471
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.95 E-value=2.5e-07 Score=87.72 Aligned_cols=231 Identities=13% Similarity=0.074 Sum_probs=141.3
Q ss_pred EEeecCCCcEEEEEEc--CC-EEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEc
Q 009274 246 KDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (538)
Q Consensus 246 ~~l~~h~~~V~~l~~~--~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 322 (538)
..+..+.....+..|+ ++ ++++...++.|..|+. +++ ...+..+...+..+++.+++ +++++...++.|..|+.
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECC
Confidence 3444555667788887 66 6777778899999998 444 45566677789999998865 46666666688999987
Q ss_pred cCCCCCcceeeecccCCceeeeEEEEeecCCEEEE----eeC-------------CCcEEEEECCCCceeEEecCCCCCe
Q 009274 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT----GSG-------------DRTIKAWSLLDGTLSCTMSGHKSAV 385 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~h~~~v 385 (538)
. +.. ..+.............-..+.++|++.++ |.. .+.|+.||..+++..... .....
T Consensus 115 ~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p 190 (305)
T 3dr2_A 115 D-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHP 190 (305)
T ss_dssp T-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSE
T ss_pred C-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCC
Confidence 5 221 11111111100011123577888887776 432 356888888777654433 33456
Q ss_pred EEEEEe--CCEEEEEecC------CcEEEEECCCCcee--EEEecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-
Q 009274 386 STLAVC--NGVLYSGSRD------GTIRLWSLSDHSLL--TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND- 454 (538)
Q Consensus 386 ~~l~~~--~~~l~s~s~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~- 454 (538)
+.++|+ ++.|+.+... +.|.+||+..+... ..+.....+... .+++.++|++. +++.+ .|.+|+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pd-gi~~d~~G~lw-v~~~~-gv~~~~~~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPD-GFCVDRGGWLW-SSSGT-GVCVFDSDG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCC-SEEECTTSCEE-ECCSS-EEEEECTTS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCC-eEEECCCCCEE-EecCC-cEEEECCCC
Confidence 789998 3467766655 78999998765411 111111111112 26889999944 44444 49999954
Q ss_pred cceeeeccccceEEEEEe--CCCEEEEEeCCCeEE
Q 009274 455 KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVS 487 (538)
Q Consensus 455 ~~~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~ 487 (538)
+.+..+..+. .+.++.+ +++.|+.++.++..+
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 4455555444 3566666 777888877764433
No 472
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.94 E-value=1e-06 Score=83.07 Aligned_cols=224 Identities=9% Similarity=0.082 Sum_probs=136.5
Q ss_pred cCCCcEEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 009274 250 GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (538)
Q Consensus 250 ~h~~~V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (538)
.+..--.+..|+ +..+++...++.|..||..+++. ..+. ....+.++++.+++. ++++. ++.|.+||..++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCc
Confidence 344455678887 45666777789999999988765 3333 457799999998766 54443 5789999987543
Q ss_pred CCcceeeecccCCceeeeEEEEeecCCEEEEeeC-----------CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 009274 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-----------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (538)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (538)
.. .+.............-..++++|++.++... .+.|+.+|.. ++.. .+..+....+.++|+ ++
T Consensus 85 ~~-~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 85 AV-VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp EE-EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECTTSC
T ss_pred EE-EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcCCCC
Confidence 22 1111111111122233567888885554422 2344444432 3332 233334456889998 34
Q ss_pred EE-EEEecCCcEEEEEC--CCCcee--EEEec-CCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeC--Ccceeeeccccc
Q 009274 394 VL-YSGSRDGTIRLWSL--SDHSLL--TVLEE-DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKG 465 (538)
Q Consensus 394 ~l-~s~s~dg~i~iwd~--~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~h~~ 465 (538)
.+ ++.+.++.|..||+ .++... ..+.. ........-++++++|++.++...++.|..||. ++.+..+..+..
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 44 55566889999997 455432 11211 111122334789999998888888889999995 467777777777
Q ss_pred eEEEEEe---CCCEEEEEe
Q 009274 466 SVFAVFL---EGKWLFTGG 481 (538)
Q Consensus 466 ~v~~~~~---~~~~l~sgs 481 (538)
.+++++| +++.|+.++
T Consensus 242 ~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp BEEEEEEESGGGCEEEEEE
T ss_pred CceEEEEeCCCCCEEEEEc
Confidence 7888887 445554443
No 473
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.91 E-value=1.6e-06 Score=89.49 Aligned_cols=263 Identities=16% Similarity=0.121 Sum_probs=157.8
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----CeE-EEEEecCCCCEEEEEcC------CCcEEEEEccCCC
Q 009274 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----KVM-AVVYVDEDQPLCISGDS------GGGIFVWSFSFPL 326 (538)
Q Consensus 258 l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----~v~-~l~~~~~~~~~l~s~~~------dg~i~vwd~~~~~ 326 (538)
+++.++.++.++.|+.+..+|..+|+.+........ .+. +.... ++ .++.++. ++.|..+|..+++
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCc
Confidence 455688899999999999999999999988764321 121 11111 33 3444443 7899999998876
Q ss_pred CCcceeeecccC---------------------------------CceeeeEEEEeecCCEEEEeeCC------------
Q 009274 327 GHEPLKKWNEEK---------------------------------DWRYSGIHALTTSGRYLYTGSGD------------ 361 (538)
Q Consensus 327 ~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~l~sg~~d------------ 361 (538)
............ ........++.++...++.++.+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 543332211100 00000112455555666666532
Q ss_pred ----CcEEEEECCCCceeEEecCC--C--------CCeE-EEEEeC---CEEEEEecCCcEEEEECCCCceeEEEecCCC
Q 009274 362 ----RTIKAWSLLDGTLSCTMSGH--K--------SAVS-TLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS 423 (538)
Q Consensus 362 ----g~i~iwd~~~~~~~~~~~~h--~--------~~v~-~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 423 (538)
+.|..+|..+|+.+..++.. . .++. .....+ ..++.++.+|.++++|..+++.+........
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 36999999999999887532 1 2221 111113 2577888999999999999998877654320
Q ss_pred -----------CceE--------------------------EEEEEcCCCCEEEEEe-----------------------
Q 009274 424 -----------GAVS--------------------------SVLSLTAVQHTLVVSH----------------------- 443 (538)
Q Consensus 424 -----------~~~~--------------------------~~~~~~~~~~~l~~~~----------------------- 443 (538)
+... ..++++|+..++++..
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 0000 1136777777777654
Q ss_pred --------------CCCcEEEEeCC--cceeeeccccceEE--EEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCc
Q 009274 444 --------------ESGSIKVWRND--KFMKSMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGA 505 (538)
Q Consensus 444 --------------~dg~i~iwd~~--~~~~~~~~h~~~v~--~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 505 (538)
.+|.|..||.. +.+.++... ..+. .+...+..++.++.||.++.||.++++..........
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 34678888854 333333221 1111 1233677888899999999999999998877765443
Q ss_pred ccCCCceEEEEEeCCEEEEEEC
Q 009274 506 IPCGSVITALLYWQGKLFVGCA 527 (538)
Q Consensus 506 ~~~~~~~~~~~~~~~~l~sg~~ 527 (538)
.... .+ ....+++++.+..
T Consensus 507 ~~~~-p~--~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 507 GIGS-PM--TYSFKGKQYIGSM 525 (571)
T ss_dssp CCSC-CE--EEEETTEEEEEEE
T ss_pred cEee-eE--EEEECCEEEEEEE
Confidence 2222 22 2235777555433
No 474
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.89 E-value=1.9e-06 Score=89.00 Aligned_cols=267 Identities=13% Similarity=0.060 Sum_probs=162.9
Q ss_pred EcCCEEEEEeC-CCcEEEEeC-CCCceEEEEecCCcC----------e-EEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 009274 260 VGGGFLFSSSF-DKSIHVWSL-KDFSHVHTFKGHDHK----------V-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (538)
Q Consensus 260 ~~~~~l~s~s~-dg~i~iwd~-~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (538)
..++.++.++. ++.|..+|. .+|+.+..+...... + ..++.. +..++.++.|+.+..+|..+++
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence 34777777777 899999999 999999887643210 0 122332 3356777889999999998876
Q ss_pred CCcceeeecccC--CceeeeEEEEeecCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCC--------------
Q 009274 327 GHEPLKKWNEEK--DWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSA-------------- 384 (538)
Q Consensus 327 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~~~-------------- 384 (538)
............ ......+ + .+..+++++. ++.|+.+|..+|+.++++......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~--v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~ 212 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPF--V--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANP 212 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCE--E--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred EEEEecCCCCCccceeccCCE--E--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccc
Confidence 554333211100 0011111 1 2455666655 799999999999999877532111
Q ss_pred -----------------------e-EEEEEe--CCEEEEEecC----------------CcEEEEECCCCceeEEEecCC
Q 009274 385 -----------------------V-STLAVC--NGVLYSGSRD----------------GTIRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 385 -----------------------v-~~l~~~--~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~~ 422 (538)
+ ..++++ .+.++.+..+ +.|..+|.++++.+..++...
T Consensus 213 ~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~ 292 (571)
T 2ad6_A 213 HYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP 292 (571)
T ss_dssp GGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC
Confidence 0 124555 4566666532 359999999999988886432
Q ss_pred C------C-ceEEEEEEcCCCC---EEEEEeCCCcEEEEeCC--cceeeecccc-------------ceE----------
Q 009274 423 S------G-AVSSVLSLTAVQH---TLVVSHESGSIKVWRND--KFMKSMQTHK-------------GSV---------- 467 (538)
Q Consensus 423 ~------~-~~~~~~~~~~~~~---~l~~~~~dg~i~iwd~~--~~~~~~~~h~-------------~~v---------- 467 (538)
. . ..........+|+ .++.++.+|.++++|.. +.+....... .++
T Consensus 293 ~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~ 372 (571)
T 2ad6_A 293 HDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMD 372 (571)
T ss_dssp TCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTT
T ss_pred CcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCC
Confidence 1 0 0111123334673 57788899999999943 3333322110 111
Q ss_pred ------------------EEEEeCCCEEEEEe-------------------------------------CCCeEEEEecC
Q 009274 468 ------------------FAVFLEGKWLFTGG-------------------------------------WDKTVSVQELA 492 (538)
Q Consensus 468 ------------------~~~~~~~~~l~sgs-------------------------------------~dg~v~iwd~~ 492 (538)
.+++++..+++..+ .+|.|..||+.
T Consensus 373 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~ 452 (571)
T 2ad6_A 373 HKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT 452 (571)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT
T ss_pred CCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECC
Confidence 12334445555443 35789999999
Q ss_pred CCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 493 GDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
+++............. ..+...++.+++++.||.|+.||..
T Consensus 453 tG~~~W~~~~~~~~~~----~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 453 TGKAKWTKWEKFAAWG----GTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp TCCEEEEEEESSCCCS----BCEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCEEEEecCCCCccc----eeEEECCCEEEEEcCCCeEEEEECC
Confidence 9988777654332111 1123347888889999999999864
No 475
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.87 E-value=3.7e-06 Score=79.23 Aligned_cols=201 Identities=13% Similarity=0.085 Sum_probs=122.7
Q ss_pred ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEE
Q 009274 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (538)
Q Consensus 289 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd 368 (538)
..+..--.+..|+++++.++++...++.|+.||..++.. ..+... ......++++++++++ +. ++.|.+||
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~~~~---~~~~~i~~~~dG~l~v-~~-~~~l~~~d 79 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----QRVTMD---APVSSVALRQSGGYVA-TI-GTKFCALN 79 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEEECS---SCEEEEEEBTTSSEEE-EE-TTEEEEEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----EEEeCC---CceEEEEECCCCCEEE-EE-CCeEEEEE
Confidence 344455678899998888888888899999999876532 111111 1123457788888544 44 56799999
Q ss_pred CCCCceeEEecC----CCCCeEEEEEe-CCEEEEEe-cC---------CcEEEEECCC-CceeEEEecCCCCceEEEEEE
Q 009274 369 LLDGTLSCTMSG----HKSAVSTLAVC-NGVLYSGS-RD---------GTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSL 432 (538)
Q Consensus 369 ~~~~~~~~~~~~----h~~~v~~l~~~-~~~l~s~s-~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~ 432 (538)
..+++....... ....+++++++ ++.++.++ .+ ..-.+|.+.. ++....... .. ...-+++
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~--~~-~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ--VD-ISNGLDW 156 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE--ES-BEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec--cc-cccceEE
Confidence 988765433221 12357888888 34344333 21 2334555443 333222221 11 2334799
Q ss_pred cCCCCEEEE-EeCCCcEEEEeCC--c--c-----eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCCeeEeee
Q 009274 433 TAVQHTLVV-SHESGSIKVWRND--K--F-----MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 433 ~~~~~~l~~-~~~dg~i~iwd~~--~--~-----~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 500 (538)
+|+++.++. .+.++.|..||.. . . ...+..+......+.+ +|++.++...++.|..||..+++.....
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 999987755 4557889999852 1 1 1222233345566665 7887777777889999999877765544
Q ss_pred e
Q 009274 501 I 501 (538)
Q Consensus 501 ~ 501 (538)
.
T Consensus 237 ~ 237 (297)
T 3g4e_A 237 K 237 (297)
T ss_dssp E
T ss_pred E
Confidence 3
No 476
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=2.2e-06 Score=88.62 Aligned_cols=270 Identities=14% Similarity=0.063 Sum_probs=160.3
Q ss_pred eEEeecCCeEEEEEeecCCCc---------EEEEEEcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----CeE-EEE
Q 009274 234 LVNGLSKGNVKFKDLQGHRDC---------VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----KVM-AVV 299 (538)
Q Consensus 234 ~~~~~~~~~~~i~~l~~h~~~---------V~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----~v~-~l~ 299 (538)
++.-.......+|.+...... -..+++.++.++.++.|+.|..+|..+|+.+...+.... .+. ...
T Consensus 80 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~ 159 (582)
T 1flg_A 80 LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT 159 (582)
T ss_dssp EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE
T ss_pred EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE
Confidence 333333344456777654321 123455688899999999999999999999988764331 111 111
Q ss_pred EecC---CCCEEEEEc------CCCcEEEEEccCCCCCcceeeeccc-----------------C---------------
Q 009274 300 YVDE---DQPLCISGD------SGGGIFVWSFSFPLGHEPLKKWNEE-----------------K--------------- 338 (538)
Q Consensus 300 ~~~~---~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~-----------------~--------------- 338 (538)
...+ +...++.++ .+|.|+-+|..+++........... .
T Consensus 160 v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~ 239 (582)
T 1flg_A 160 IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVES 239 (582)
T ss_dssp EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGG
T ss_pred EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccc
Confidence 1121 111455554 3788999998877644322110000 0
Q ss_pred ----CceeeeEEEEeecCCEEEEeeC--------------------C----CcEEEEECCCCceeEEecC--CC------
Q 009274 339 ----DWRYSGIHALTTSGRYLYTGSG--------------------D----RTIKAWSLLDGTLSCTMSG--HK------ 382 (538)
Q Consensus 339 ----~~~~~~~~~~~~~~~~l~sg~~--------------------d----g~i~iwd~~~~~~~~~~~~--h~------ 382 (538)
....-...++.+..+.++.++. | +.|..+|..+|+.+..++. |.
T Consensus 240 ~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~ 319 (582)
T 1flg_A 240 WSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSG 319 (582)
T ss_dssp GGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccC
Confidence 0000012355666677776653 2 6899999999999998753 32
Q ss_pred --CCeEEEEE---eC---CEEEEEecCCcEEEEECCCCceeEEEecCCCC-----------ce-----------------
Q 009274 383 --SAVSTLAV---CN---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----------AV----------------- 426 (538)
Q Consensus 383 --~~v~~l~~---~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~----------------- 426 (538)
.++. +.. .+ ..++.++.+|.++++|.++|+.+..+...... ..
T Consensus 320 ~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 398 (582)
T 1flg_A 320 NNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKH 398 (582)
T ss_dssp CCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSS
T ss_pred CCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccC
Confidence 1222 122 13 37888999999999999999988776543200 00
Q ss_pred ---E------------EEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCC--cc
Q 009274 427 ---S------------SVLSLTAVQHTLVVSH---------------------------------ESGSIKVWRND--KF 456 (538)
Q Consensus 427 ---~------------~~~~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~--~~ 456 (538)
. ..++++|+..++++.. .+|.|..||.. +.
T Consensus 399 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~ 478 (582)
T 1flg_A 399 GKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKV 478 (582)
T ss_dssp CCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCE
T ss_pred CCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCE
Confidence 0 0124555555555433 25778888854 33
Q ss_pred eeeeccccceEE--EEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCc
Q 009274 457 MKSMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGA 505 (538)
Q Consensus 457 ~~~~~~h~~~v~--~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 505 (538)
+.+..... ++. .+...+.+++.|+.||.++.||.++++..........
T Consensus 479 ~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 479 VWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp EEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred EEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 33332221 111 2234677888899999999999999998887766443
No 477
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.87 E-value=9.4e-07 Score=93.99 Aligned_cols=196 Identities=12% Similarity=0.059 Sum_probs=122.4
Q ss_pred CCcCeEEEEEecCCCCEEEEEcCC----CcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc---
Q 009274 291 HDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (538)
Q Consensus 291 h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~--- 363 (538)
|...+..++|+|++..++++.+.. ..|++||+.+++.... .... ......+|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~----~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKD----VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEE----EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCC----ceeccEEEe-CCCEEEEEEecCcccc
Confidence 555788899999887776655443 4799999998753221 1110 111234788 9998888887743
Q ss_pred ----------EEEEECCCCce----eEEecC-CCCCeEEEEEe--CCEEE-EEec---CCcEEEEECCCCc-eeEEEecC
Q 009274 364 ----------IKAWSLLDGTL----SCTMSG-HKSAVSTLAVC--NGVLY-SGSR---DGTIRLWSLSDHS-LLTVLEED 421 (538)
Q Consensus 364 ----------i~iwd~~~~~~----~~~~~~-h~~~v~~l~~~--~~~l~-s~s~---dg~i~iwd~~~~~-~~~~~~~~ 421 (538)
|++|++.++.. +..... |...+.++.|+ +++|+ +.+. ++.|+++|+.++. ....+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 99999987653 333333 45567888898 44554 3332 3589999998764 34445444
Q ss_pred CCCceEEEEEEcCCCCEEEEEeC-C---CcEEEEeCCcc----eeeeccccceEEEEEeCCCEEEEEeCC-C--eEEEEe
Q 009274 422 SSGAVSSVLSLTAVQHTLVVSHE-S---GSIKVWRNDKF----MKSMQTHKGSVFAVFLEGKWLFTGGWD-K--TVSVQE 490 (538)
Q Consensus 422 ~~~~~~~~~~~~~~~~~l~~~~~-d---g~i~iwd~~~~----~~~~~~h~~~v~~~~~~~~~l~sgs~d-g--~v~iwd 490 (538)
... ... .+++++..|+..+. + +.|..+|.... .+.+..|...+..++++++.|+....+ + .|++||
T Consensus 280 ~~~-~~~--~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDA-DVS--LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSS-CEE--EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCc-eEE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEE
Confidence 332 222 25566665554443 3 57888886542 245555554444777888877766654 4 689999
Q ss_pred cCCCee
Q 009274 491 LAGDEF 496 (538)
Q Consensus 491 ~~~~~~ 496 (538)
+.++..
T Consensus 357 ~~g~~~ 362 (693)
T 3iuj_A 357 YEGKRV 362 (693)
T ss_dssp TTSCEE
T ss_pred CCCCee
Confidence 987654
No 478
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.86 E-value=1.8e-07 Score=90.50 Aligned_cols=247 Identities=9% Similarity=-0.078 Sum_probs=153.9
Q ss_pred cEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEc---------CCCcEEEEEccCCCCCcceeeecccC--Cce
Q 009274 273 SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK--DWR 341 (538)
Q Consensus 273 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~ 341 (538)
+|.++|..+++.+.++.....+ .+.++|++..++++.+ .++.|.+||..+.+....+....... ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999876666 7999998888777653 47899999999877655554320000 000
Q ss_pred eeeEEEEeecCCEEEEeeC--CCcEEE--EECCCCceeEEecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCC-----
Q 009274 342 YSGIHALTTSGRYLYTGSG--DRTIKA--WSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSD----- 411 (538)
Q Consensus 342 ~~~~~~~~~~~~~l~sg~~--dg~i~i--wd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~----- 411 (538)
......++|||++++++.. +..+.+ +|..+ +.++..... ..+... ...+++.+.|+.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 1124589999998888874 467888 99877 444432111 112223 44666777899999999886
Q ss_pred CceeEE----EecCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc----ceeeecc------------ccceEEEEE
Q 009274 412 HSLLTV----LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----FMKSMQT------------HKGSVFAVF 471 (538)
Q Consensus 412 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~------------h~~~v~~~~ 471 (538)
++.... +... ... . . .+++..++..+. +.+.+.|... ....+.. +......++
T Consensus 200 ~~v~~~~t~~i~vg-~~P-~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 200 GIVGAQCTGAQNCS-SQA-A---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp EECCCCSCTTSCBC-SCC-E---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred CeEEEEeeeeeeCC-CCc-c---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 333211 1111 111 1 3 555666655556 8999999642 1222211 111124577
Q ss_pred eCCCEEEEEeC---------CCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCE--EEEEE-CCCeEEEEEcCC
Q 009274 472 LEGKWLFTGGW---------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGC-ADRTVKVYYYGK 538 (538)
Q Consensus 472 ~~~~~l~sgs~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~sg~-~dg~v~vw~~~~ 538 (538)
++++.++.+.. ++.+.++|+.+.+......... ......+.+|++ +++.. .++.|.++|..+
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-----DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-----CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 78888776543 2356699999988665443221 133444555664 55566 599999999753
No 479
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.86 E-value=7.6e-07 Score=84.49 Aligned_cols=193 Identities=12% Similarity=0.133 Sum_probs=121.1
Q ss_pred CCCcEEEEEEc-C-CEEEEEeCCCcEEEEeCCCCceEEE-Eec----CCcCeEEEEEecCCCCEEEEEcCC---------
Q 009274 251 HRDCVTGLAVG-G-GFLFSSSFDKSIHVWSLKDFSHVHT-FKG----HDHKVMAVVYVDEDQPLCISGDSG--------- 314 (538)
Q Consensus 251 h~~~V~~l~~~-~-~~l~s~s~dg~i~iwd~~~~~~~~~-~~~----h~~~v~~l~~~~~~~~~l~s~~~d--------- 314 (538)
+...+.+++++ . ..++.++.++.|.+||.+ ++.... ... +...+.++++.+++ .++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccc
Confidence 44678899998 4 676666666689999988 665432 221 12357899998865 465655544
Q ss_pred ------CcEEEEEccCCCCCcceeeecccCCceeeeEEEEe----ecCCEEEEe-eCCCcEEEEECC-CCc-----eeEE
Q 009274 315 ------GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT----TSGRYLYTG-SGDRTIKAWSLL-DGT-----LSCT 377 (538)
Q Consensus 315 ------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~sg-~~dg~i~iwd~~-~~~-----~~~~ 377 (538)
+.|..||.. +. ........ ......+++ ++++.++.+ ..++.|.+||.. +++ ....
T Consensus 147 ~~~~~~~~l~~~~~~-g~----~~~~~~~~--~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQ----MIQVDTAF--QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp TTSSSCEEEEEECTT-SC----EEEEEEEE--SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred cccCCCCeEEEECCC-CC----EEEeccCC--CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 456555543 21 11111111 111234677 888655544 567899999986 443 2233
Q ss_pred ecCCC-CCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE-eCCCcEEEEeC
Q 009274 378 MSGHK-SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRN 453 (538)
Q Consensus 378 ~~~h~-~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~ 453 (538)
+..+. .....++++ ++++++...++.|.+||..+++....+..+. .... .++++++++.|+++ ..++.|..|+.
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~-~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-EKPS-NLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS-SCEE-EEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-CCce-eEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 34444 567889998 4456666678899999998787776665442 2333 36889999955544 45688999986
Q ss_pred C
Q 009274 454 D 454 (538)
Q Consensus 454 ~ 454 (538)
.
T Consensus 298 ~ 298 (314)
T 1pjx_A 298 Q 298 (314)
T ss_dssp S
T ss_pred C
Confidence 4
No 480
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.86 E-value=2.5e-06 Score=88.04 Aligned_cols=271 Identities=10% Similarity=0.022 Sum_probs=163.7
Q ss_pred cCCEEEEEeC-CCcEEEEeC-CCCceEEEEecCCcC-----------eEEEEEecCCCC---EEEEEcCCCcEEEEEccC
Q 009274 261 GGGFLFSSSF-DKSIHVWSL-KDFSHVHTFKGHDHK-----------VMAVVYVDEDQP---LCISGDSGGGIFVWSFSF 324 (538)
Q Consensus 261 ~~~~l~s~s~-dg~i~iwd~-~~~~~~~~~~~h~~~-----------v~~l~~~~~~~~---~l~s~~~dg~i~vwd~~~ 324 (538)
.++.++.++. ++.|.-+|. .+|+.+..+...... ...+++.|.++. .++.++.|+.+.-+|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 4777888887 899999999 999999988643321 123455433333 357788899999999988
Q ss_pred CCCCcceeeecccCCceeeeEEEEeecCCEEEEee------CCCcEEEEECCCCceeEEecCCCCC--------------
Q 009274 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS------GDRTIKAWSLLDGTLSCTMSGHKSA-------------- 384 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~h~~~-------------- 384 (538)
++...................-.+ .+..+++++ .+|.|+.+|.++|+.++.+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 765543322111000000000011 244566665 3899999999999999887532211
Q ss_pred -----------------------e-EEEEEe--CCEEEEEecC----------------CcEEEEECCCCceeEEEecCC
Q 009274 385 -----------------------V-STLAVC--NGVLYSGSRD----------------GTIRLWSLSDHSLLTVLEEDS 422 (538)
Q Consensus 385 -----------------------v-~~l~~~--~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~~ 422 (538)
+ ..+++. .++++.+..+ +.|..+|.++|+.+..++..+
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 123444 5677777665 389999999999998887543
Q ss_pred CCc-------eEEEEEEc-CCC---CEEEEEeCCCcEEEEeCC--cceeeeccc-------------cceE---------
Q 009274 423 SGA-------VSSVLSLT-AVQ---HTLVVSHESGSIKVWRND--KFMKSMQTH-------------KGSV--------- 467 (538)
Q Consensus 423 ~~~-------~~~~~~~~-~~~---~~l~~~~~dg~i~iwd~~--~~~~~~~~h-------------~~~v--------- 467 (538)
... ........ .+| ..++.++.+|.++++|.. +.+...... ..++
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 211 11112232 567 467778899999999943 333322110 0011
Q ss_pred -------------------EEEEeCCCEEEEE---------------------------------e------CCCeEEEE
Q 009274 468 -------------------FAVFLEGKWLFTG---------------------------------G------WDKTVSVQ 489 (538)
Q Consensus 468 -------------------~~~~~~~~~l~sg---------------------------------s------~dg~v~iw 489 (538)
.+++++.+++++. + .+|.+..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 1222222222221 1 45889999
Q ss_pred ecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 490 ELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 490 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
|+.+++............. ..+...++.++.++.||.++.||..
T Consensus 459 D~~tG~~~W~~~~~~~~~~----g~~~tagg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 459 NAITGDYKWEKMERFAVWG----GTMATAGDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp CTTTCCEEEEEEESSCCCS----BCEEETTTEEEEECTTSEEEEEETT
T ss_pred ECCCCCEEeEecCCCCccC----cceEecCCEEEEECCCCeEEEEECC
Confidence 9999998777654322111 1233457888889999999999864
No 481
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.83 E-value=6.8e-07 Score=80.60 Aligned_cols=178 Identities=15% Similarity=0.148 Sum_probs=128.0
Q ss_pred EEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee
Q 009274 255 VTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH-KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (538)
Q Consensus 255 V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (538)
...+.|+ +.++.+.+.+|.|+++|+++++.+..+ -... .-..+++ .++.+.+....++.+.+||..+.+....+.
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 4688888 566667778889999999999998887 3322 1233544 466787888889999999998766554444
Q ss_pred eecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecC--CC---CCeEEEEEeCCEEEEEe-cCCcEEE
Q 009274 333 KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--HK---SAVSTLAVCNGVLYSGS-RDGTIRL 406 (538)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~l~~~~~~l~s~s-~dg~i~i 406 (538)
.. .. -..++++++.|+.+..++.|.++|..+.+.+.++.. +. ..++.+.|.++.|++.. .++.|.+
T Consensus 134 ~~--~e------GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 134 YS--GE------GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLE 205 (268)
T ss_dssp CS--SC------CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred CC--Cc------eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEE
Confidence 31 11 125567888888887899999999999998887743 22 24577888866666665 5889999
Q ss_pred EECCCCceeEEEecC-----------CCCceEEEEEEcCCCCEEEEEe
Q 009274 407 WSLSDHSLLTVLEED-----------SSGAVSSVLSLTAVQHTLVVSH 443 (538)
Q Consensus 407 wd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~ 443 (538)
.|.++++.+..+... ....+..-++++|+++.|++.+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999998887643 1223455579999776555554
No 482
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.80 E-value=4e-06 Score=86.52 Aligned_cols=243 Identities=16% Similarity=0.152 Sum_probs=148.2
Q ss_pred EEEE--cCCE----EEEEeCCCcEEEEeCCCCceEEEEecCCc----CeE-EEEEecCCCCEEEEEc------CCCcEEE
Q 009274 257 GLAV--GGGF----LFSSSFDKSIHVWSLKDFSHVHTFKGHDH----KVM-AVVYVDEDQPLCISGD------SGGGIFV 319 (538)
Q Consensus 257 ~l~~--~~~~----l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----~v~-~l~~~~~~~~~l~s~~------~dg~i~v 319 (538)
.+++ .+.. ++.++.|+.+..+|..+|+.+........ .+. ..... ++ .++.++ .+|.|+.
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A 186 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTA 186 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEE
Confidence 3566 5444 88888999999999999999988764321 121 11111 33 344444 3799999
Q ss_pred EEccCCCCCcceeeecccC---------------------------------CceeeeEEEEeecCCEEEEeeCC-----
Q 009274 320 WSFSFPLGHEPLKKWNEEK---------------------------------DWRYSGIHALTTSGRYLYTGSGD----- 361 (538)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~l~sg~~d----- 361 (538)
+|..+++............ ....-...++.+....++.++.+
T Consensus 187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~ 266 (599)
T 1w6s_A 187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN 266 (599)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence 9998876543332211100 00000123455666777777665
Q ss_pred -----------CcEEEEECCCCceeEEecCCC----------CCeEEEEE---eC---CEEEEEecCCcEEEEECCCCce
Q 009274 362 -----------RTIKAWSLLDGTLSCTMSGHK----------SAVSTLAV---CN---GVLYSGSRDGTIRLWSLSDHSL 414 (538)
Q Consensus 362 -----------g~i~iwd~~~~~~~~~~~~h~----------~~v~~l~~---~~---~~l~s~s~dg~i~iwd~~~~~~ 414 (538)
+.|..+|..+|+.+..++... .++. +.. .+ ..++.++.+|.++++|.++|+.
T Consensus 267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 389999999999998875422 1222 222 13 3677789999999999999998
Q ss_pred eEEEecCC-----------CCceE--------------------------EEEEEcCCCCEEEEEe--------------
Q 009274 415 LTVLEEDS-----------SGAVS--------------------------SVLSLTAVQHTLVVSH-------------- 443 (538)
Q Consensus 415 ~~~~~~~~-----------~~~~~--------------------------~~~~~~~~~~~l~~~~-------------- 443 (538)
+....... .+... ..++++|+..++++..
T Consensus 346 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (599)
T 1w6s_A 346 VSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPY 425 (599)
T ss_dssp EEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred eecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccc
Confidence 87765321 00000 1135666666655532
Q ss_pred -------------------------CCCcEEEEeCCc--ceeeeccccceEE--EEEeCCCEEEEEeCCCeEEEEecCCC
Q 009274 444 -------------------------ESGSIKVWRNDK--FMKSMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 444 -------------------------~dg~i~iwd~~~--~~~~~~~h~~~v~--~~~~~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
.+|.+..||..+ .+..... ..+.. .+...+.+++.++.||.++.||.+++
T Consensus 426 ~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 426 KAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 236677777543 2222221 11111 13346788888999999999999999
Q ss_pred eeEeeeecCC
Q 009274 495 EFEEDVIPTG 504 (538)
Q Consensus 495 ~~~~~~~~~~ 504 (538)
+.........
T Consensus 505 ~~lW~~~l~~ 514 (599)
T 1w6s_A 505 DLLWKFKIPS 514 (599)
T ss_dssp CEEEEEECSS
T ss_pred CEEEEeeCCC
Confidence 9888776543
No 483
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=2.9e-06 Score=76.50 Aligned_cols=185 Identities=14% Similarity=0.116 Sum_probs=130.6
Q ss_pred cCCCc--EEEEEEc-CCEEEEEeCCC--cEEEEeCCCCceEEEEecCCcC-eEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 250 GHRDC--VTGLAVG-GGFLFSSSFDK--SIHVWSLKDFSHVHTFKGHDHK-VMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 250 ~h~~~--V~~l~~~-~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
.|... ...+.|+ +.++.+.+.+| .|+++|+++++.+..+...... -..++. .++.+.+....++.+.++|..
T Consensus 38 phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 38 PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETT
T ss_pred cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECc
Confidence 45433 3788888 55556666665 8999999999999988754332 133444 356677777789999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCC--C---CCeEEEEEeCCEEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH--K---SAVSTLAVCNGVLYSG 398 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h--~---~~v~~l~~~~~~l~s~ 398 (538)
+.+....+.... . -..++++++.|+....++.|.++|..+.+.+.++... . ..++.+.|.++.+++.
T Consensus 116 t~~~~~ti~~~~--e------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 116 NLRQVRSFNYDG--E------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFAN 187 (262)
T ss_dssp TCCEEEEEECSS--C------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEECCC--C------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEE
Confidence 776554444311 1 1256678887777777889999999999988876532 1 3355678886666666
Q ss_pred e-cCCcEEEEECCCCceeEEEecC----------CCCceEEEEEEcCCCCEEEEEeC
Q 009274 399 S-RDGTIRLWSLSDHSLLTVLEED----------SSGAVSSVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 399 s-~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~ 444 (538)
. .++.|.+.|.++++.+..+... ....+..-++++|+++.|++.+.
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5 5889999999999998888653 11234455799998887777664
No 484
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=2.5e-06 Score=83.90 Aligned_cols=248 Identities=12% Similarity=0.074 Sum_probs=155.4
Q ss_pred CCeEEEEEeecCCCcEEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCceEEEEecC-------CcCeEEEEE
Q 009274 240 KGNVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH-------DHKVMAVVY 300 (538)
Q Consensus 240 ~~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~ 300 (538)
.....+..+.--..+ .++++ +++++.+. .++.|.++|..+++.+.++.-. ...-..+.+
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~ 184 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL 184 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE
T ss_pred CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE
Confidence 333445555544455 78998 77777765 4679999999999998887632 123457889
Q ss_pred ecCCCCEEEEEcC-CCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEE-
Q 009274 301 VDEDQPLCISGDS-GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCT- 377 (538)
Q Consensus 301 ~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~- 377 (538)
+|+++.++++... ++.|.+.|+.+.+....+... .+..+.|++ +.+++.+.||.+.+.+..+++....
T Consensus 185 spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~---------g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 185 TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP---------DCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---------SEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC---------CceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 9977766665543 689999999876544333221 012344443 4667777889888888866655432
Q ss_pred ---ecCCCCCe-EEEEEe--CCEEEEEecCCcEEEEECCCCcee--EEEecC--C-------CCceEEEEEEcCCCCEEE
Q 009274 378 ---MSGHKSAV-STLAVC--NGVLYSGSRDGTIRLWSLSDHSLL--TVLEED--S-------SGAVSSVLSLTAVQHTLV 440 (538)
Q Consensus 378 ---~~~h~~~v-~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~--~-------~~~~~~~~~~~~~~~~l~ 440 (538)
+.....++ ..+.+. ++.++..+..+.+.+.|....... ..+... . ..... .+.++++++.++
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~-~va~s~dg~rly 334 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ-QTAYHRQSDRIY 334 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS-CEEEEGGGTEEE
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce-eeEEcCCCCEEE
Confidence 21112221 123445 455556667889999998765422 111100 0 00000 147899988777
Q ss_pred EEeC----------CCcEEEEeCC--cceeeeccccceEEEE--EeCCC-EEEEEe-CCCeEEEEecCCCeeEeee
Q 009274 441 VSHE----------SGSIKVWRND--KFMKSMQTHKGSVFAV--FLEGK-WLFTGG-WDKTVSVQELAGDEFEEDV 500 (538)
Q Consensus 441 ~~~~----------dg~i~iwd~~--~~~~~~~~h~~~v~~~--~~~~~-~l~sgs-~dg~v~iwd~~~~~~~~~~ 500 (538)
+... ++.|.++|.. +.+..+.... ...++ ++|++ ++++.. .++.|.++|+.+.+.....
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 7642 3579999954 4555554322 23344 45888 888888 5899999999999887664
No 485
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.77 E-value=7.9e-06 Score=84.43 Aligned_cols=271 Identities=9% Similarity=-0.001 Sum_probs=159.2
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCe---------EEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcc
Q 009274 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKV---------MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (538)
Q Consensus 260 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v---------~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (538)
..++.++.++.++.|..+|..+|+.+..+....... ..+++. +..++.++.|+.+.-+|..+++....
T Consensus 66 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~---~~~v~~~t~dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 66 VSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY---GDKVFFGTLDASVVALNKNTGKVVWK 142 (582)
T ss_dssp EETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE---TTEEEEEETTTEEEEEESSSCCEEEE
T ss_pred EECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE---CCEEEEEeCCCEEEEEECCCCCEEee
Confidence 346667777764559999999999999887543210 122231 23567778899999999988876543
Q ss_pred eeeecccCC--ceeeeEEEEe-ecCC-EEEEeeC------CCcEEEEECCCCceeEEecCCCCCe---------------
Q 009274 331 LKKWNEEKD--WRYSGIHALT-TSGR-YLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAV--------------- 385 (538)
Q Consensus 331 ~~~~~~~~~--~~~~~~~~~~-~~~~-~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~~~v--------------- 385 (538)
......... .....+..-. .+++ .+++++. ++.|+.+|..+|+.+.........+
T Consensus 143 ~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g 222 (582)
T 1flg_A 143 KKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVK 222 (582)
T ss_dssp EECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTT
T ss_pred ecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccc
Confidence 332211100 0111111100 0122 6666653 7899999999999988764321100
Q ss_pred --------------------------EEEEEe--CCEEEEEec--------------------C----CcEEEEECCCCc
Q 009274 386 --------------------------STLAVC--NGVLYSGSR--------------------D----GTIRLWSLSDHS 413 (538)
Q Consensus 386 --------------------------~~l~~~--~~~l~s~s~--------------------d----g~i~iwd~~~~~ 413 (538)
..++++ .++++.+.. | +.|..+|.++|+
T Consensus 223 ~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~ 302 (582)
T 1flg_A 223 APSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGE 302 (582)
T ss_dssp CTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCC
T ss_pred cccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCC
Confidence 123444 456766653 2 589999999999
Q ss_pred eeEEEecCCCC------ceEEE-EEEc-CCCC---EEEEEeCCCcEEEEeCC--cceeeecccc-------------ce-
Q 009274 414 LLTVLEEDSSG------AVSSV-LSLT-AVQH---TLVVSHESGSIKVWRND--KFMKSMQTHK-------------GS- 466 (538)
Q Consensus 414 ~~~~~~~~~~~------~~~~~-~~~~-~~~~---~l~~~~~dg~i~iwd~~--~~~~~~~~h~-------------~~- 466 (538)
.+..++..+.. ....+ .... .+|+ .++.++.+|.++++|.. +.+....... .+
T Consensus 303 ~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 303 VKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 99888653211 11111 2222 4664 78889999999999943 3333222110 00
Q ss_pred --------------------E-------------EEEEeCCCEEEEEe--------------------------------
Q 009274 467 --------------------V-------------FAVFLEGKWLFTGG-------------------------------- 481 (538)
Q Consensus 467 --------------------v-------------~~~~~~~~~l~sgs-------------------------------- 481 (538)
+ .+++++...+++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 0 01112222333221
Q ss_pred -CCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEeCCEEEEEECCCeEEEEEcC
Q 009274 482 -WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKVYYYG 537 (538)
Q Consensus 482 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~v~vw~~~ 537 (538)
.+|.|..||+.+++............. ..+...++.++.|+.||.++.||..
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~~~~~~----g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEHLPLWA----GVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESSCCCS----CCEEETTTEEEEECTTSEEEEEETT
T ss_pred CCcceEEEEECCCCCEEEEecCCCCCcc----cceEeCCCEEEEECCCCcEEEEECC
Confidence 368899999999998776654332211 1223357888899999999999865
No 486
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.77 E-value=9.9e-06 Score=77.44 Aligned_cols=218 Identities=11% Similarity=0.082 Sum_probs=130.5
Q ss_pred EEEEEEc---CCEEEEEeCCCcEEEEeCCCCceEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcce
Q 009274 255 VTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (538)
Q Consensus 255 V~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (538)
..+.+|+ +..+++...++.|..||.++++.. .+. ....+.++++.+++. ++++. . ..|.+||..++.... +
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~-l~v~~-~-~gl~~~d~~~g~~~~-~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSK-QLIAS-D-DGLFLRDTATGVLTL-H 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTE-EEEEE-T-TEEEEEETTTCCEEE-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCe-EEEEE-C-CCEEEEECCCCcEEE-E
Confidence 4566777 455666667889999999877543 333 356799999998655 44443 3 349999987654221 1
Q ss_pred eeecccCCceeeeEEEEeecCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEE-EEecCC
Q 009274 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLY-SGSRDG 402 (538)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~dg 402 (538)
................++++|++.++... .+.|..+| +++... +..+......++|+ ++.++ +.+.++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 11111111122234567888886555432 24566666 454332 32233456789998 33554 445678
Q ss_pred cEEEEECC--CC-cee--EEEe-cCCCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCC-cceeeeccccceEEEEEe---
Q 009274 403 TIRLWSLS--DH-SLL--TVLE-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVFL--- 472 (538)
Q Consensus 403 ~i~iwd~~--~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~h~~~v~~~~~--- 472 (538)
.|.+||+. ++ +.. ..+. ..........++++++|++.++...++.|..||.. +....+..+...+.++++
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecC
Confidence 99999986 55 321 1221 11112233447889999888877777899999953 445566666667888876
Q ss_pred CCCEEEEEe
Q 009274 473 EGKWLFTGG 481 (538)
Q Consensus 473 ~~~~l~sgs 481 (538)
+++.|+.++
T Consensus 282 d~~~L~vt~ 290 (326)
T 2ghs_A 282 DASRLLVTS 290 (326)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEe
Confidence 445554444
No 487
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.76 E-value=3.3e-06 Score=75.49 Aligned_cols=185 Identities=15% Similarity=0.080 Sum_probs=129.7
Q ss_pred cCC--CcEEEEEEcCCE-EEEEeCC--CcEEEEeCCCCceEEEEecCCcC-eEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 250 GHR--DCVTGLAVGGGF-LFSSSFD--KSIHVWSLKDFSHVHTFKGHDHK-VMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 250 ~h~--~~V~~l~~~~~~-l~s~s~d--g~i~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
.|. .-...+.|+++. +.+.+.+ ..|+.+|+++++.+..+...... -..++.. ++.+......++.+.++|..
T Consensus 16 phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECC
Confidence 454 345689999544 4555554 48999999999999988754332 2334443 56677777889999999998
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSG 398 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~ 398 (538)
+.+....+... .. -..++++++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.+.++.+++.
T Consensus 94 tl~~~~ti~~~--~~------Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTPRARFRYP--GE------GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEEEEEEECS--SC------CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEeCC--CC------ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 76554444331 11 13566788877777778999999999998888775321 3567788887766666
Q ss_pred e-cCCcEEEEECCCCceeEEEecC-----------CCCceEEEEEEcCCCCEEEEEeC
Q 009274 399 S-RDGTIRLWSLSDHSLLTVLEED-----------SSGAVSSVLSLTAVQHTLVVSHE 444 (538)
Q Consensus 399 s-~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~ 444 (538)
. .+..|.+.|.++++.+..+... ....+..-++++|+++.|++.+.
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5 5789999999999998887633 12234555799998777766654
No 488
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=8.2e-07 Score=85.72 Aligned_cols=251 Identities=12% Similarity=0.058 Sum_probs=142.1
Q ss_pred CcEEEEEEc--CCEEEEEe--CCCcEEEEeCCCCceEEEEe-------cCCcCeEEEEEecCCCCEEEEEcC-----CCc
Q 009274 253 DCVTGLAVG--GGFLFSSS--FDKSIHVWSLKDFSHVHTFK-------GHDHKVMAVVYVDEDQPLCISGDS-----GGG 316 (538)
Q Consensus 253 ~~V~~l~~~--~~~l~s~s--~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~~~-----dg~ 316 (538)
..+..++++ |+.+++.. .++.++||.+.+++. ..+. .|-..+.++++.+++. ++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 678899998 67777753 234356666555543 2221 2456789999988644 5444332 578
Q ss_pred EEEEEccCCCCCcceeeecc-cCCceeeeEEEEeecCCEE-EEee---CCCcEEEEECCCCceeEEecCCCCCe---EEE
Q 009274 317 IFVWSFSFPLGHEPLKKWNE-EKDWRYSGIHALTTSGRYL-YTGS---GDRTIKAWSLLDGTLSCTMSGHKSAV---STL 388 (538)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l-~sg~---~dg~i~iwd~~~~~~~~~~~~h~~~v---~~l 388 (538)
|.+||+.+++....+..... ........-..+++++..+ ++.. .++.|.+||+.+++....+.+|.... ..+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999886643222221100 0000111234667655544 4444 57899999999888777666543221 112
Q ss_pred EEeCCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEeCCC-cEEEEeCCcc----------e
Q 009274 389 AVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG-SIKVWRNDKF----------M 457 (538)
Q Consensus 389 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~----------~ 457 (538)
...+..+.+.+.++.++.|.. ... -++++|+++.|+.+..++ .+..++.... .
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~---------------~~~-gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL---------------GVN-GIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EETTEECBEECTTSCEECCCC---------------CEE-EEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred eECCEEEEeccCCCceeceec---------------ccc-eeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 222345666777777765531 122 279999999898887766 4555542110 0
Q ss_pred e--eeccccceEE--EEEeCCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEE-eCCEEEEE
Q 009274 458 K--SMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGKLFVG 525 (538)
Q Consensus 458 ~--~~~~h~~~v~--~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg 525 (538)
. ...++.+... +++.+|+++++...++.|.+||..+++........ .......+++ +++.|+..
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~----~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE----KLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG----GGSCEEEEEECTTSCEEEE
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC----ceecCCeeEECCCCcEEEE
Confidence 0 1112222222 33448888888888999999999555543332211 1223344444 46665543
No 489
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.75 E-value=6.3e-06 Score=75.26 Aligned_cols=192 Identities=14% Similarity=0.057 Sum_probs=134.3
Q ss_pred cEEEEEEcC-CEEEEEeC---CCcEEEEeCCCCceEEEEecCC-cCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 009274 254 CVTGLAVGG-GFLFSSSF---DKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (538)
Q Consensus 254 ~V~~l~~~~-~~l~s~s~---dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (538)
....++|++ +.|+.++. ++.|++.|+.+++.+..+.-.. .....+++. ++.+.++.-.++.+.++|..+.+..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 367899983 56665543 5899999999999998876322 233455554 5567777778999999999876544
Q ss_pred cceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEEe-cCC
Q 009274 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSGS-RDG 402 (538)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~s-~dg 402 (538)
..+..- .... ..+++|++.++++..++.|.++|..+.+.+..+.-.. ...+.+.|.++.+++.. .++
T Consensus 100 ~~i~~g-~~~g------~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~ 172 (266)
T 2iwa_A 100 KNFTHQ-MKDG------WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp EEEECC-SSSC------CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSS
T ss_pred EEEECC-CCCe------EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCC
Confidence 433321 1111 3577888877777788999999999998887775321 23677888866666655 578
Q ss_pred cEEEEECCCCceeEEEecCC-----------CCceEEEEEEcCCCCEEE-EEeCCCcEEEEeCC
Q 009274 403 TIRLWSLSDHSLLTVLEEDS-----------SGAVSSVLSLTAVQHTLV-VSHESGSIKVWRND 454 (538)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~ 454 (538)
.|.+.|..+++.+..+.... ......-++++|+++.++ ++...+.+...++.
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 99999999999988886421 112334479999986555 55567888887743
No 490
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.75 E-value=1.4e-09 Score=102.32 Aligned_cols=85 Identities=9% Similarity=0.085 Sum_probs=55.8
Q ss_pred cccCcchhhhhhhhhhhhcC-ccchhhhhheeeccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHhhhhc
Q 009274 68 GYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLN 146 (538)
Q Consensus 68 ~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 146 (538)
+.++|||||||+||+|+||+ ||.+...........+. ............+ .....+.+++.+||+
T Consensus 180 ~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--------~~~~~l~~li~~~l~ 245 (286)
T 3uqc_A 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD------TAGQPIEPADIDR--------DIPFQISAVAARSVQ 245 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC------TTSCBCCHHHHCT--------TSCHHHHHHHHHHHC
T ss_pred CchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH------hccCCCChhhccc--------CCCHHHHHHHHHHcc
Confidence 47999999999999999999 99986543111000000 1111111111111 122248889999999
Q ss_pred cCCCCCcchhhHHHHHHHhhc
Q 009274 147 FDPGCRPLLTNVWKCIRELII 167 (538)
Q Consensus 147 ~~p~~r~~~~~~~~~l~~l~~ 167 (538)
.+|.+| ++.++.+.+.+...
T Consensus 246 ~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 246 GDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TTSSCC-CHHHHHHHHHHHHC
T ss_pred cCCccC-CHHHHHHHHHHHhc
Confidence 999999 99999998888653
No 491
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.68 E-value=0.00016 Score=78.23 Aligned_cols=279 Identities=9% Similarity=0.124 Sum_probs=160.9
Q ss_pred CCcEEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEEec-------CCcCeEEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 009274 252 RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-------HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (538)
Q Consensus 252 ~~~V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (538)
...|.++... .+.+..|+.++-+.+||..+++....... ....|.++...+++. + ..|+.+ -|.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-l-Wigt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-L-WIGTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-E-EEEESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC-E-EEEeCC-hhheEcCC
Confidence 4568888876 66677777665689999877654432221 135688888765443 3 444444 68888876
Q ss_pred CCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCCCceeEEec------CCCCCeEEEEEe-CCEE
Q 009274 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMS------GHKSAVSTLAVC-NGVL 395 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~-~~~l 395 (538)
+....................+.++..|.+ .+..|+.++-|..|+..++....... -....|.++..+ ++.|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l 370 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL 370 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE
Confidence 432111000000011111223445555433 57778887889999876543322111 124568999887 6678
Q ss_pred EEEecCCcEEEEECCCCceeEEEecC------CCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeec-----cc
Q 009274 396 YSGSRDGTIRLWSLSDHSLLTVLEED------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQ-----TH 463 (538)
Q Consensus 396 ~s~s~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~-----~h 463 (538)
..|+.++-|..||..+++........ ........+...++++.|..|+.++-+..||..+ ....+. .+
T Consensus 371 WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 371 WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCS
T ss_pred EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcC
Confidence 88888888999998877644332111 0112233356677787577788877799998553 233332 23
Q ss_pred cceEEEEEeC-CCEEEEEeCCCeEEEEecCCCeeEeeeecC--CcccCCCceEEEEE-eCCEEEEEECCCeEEEEEc
Q 009274 464 KGSVFAVFLE-GKWLFTGGWDKTVSVQELAGDEFEEDVIPT--GAIPCGSVITALLY-WQGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 464 ~~~v~~~~~~-~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~l~sg~~dg~v~vw~~ 536 (538)
...|.++..+ ...|..|+. +.+.+||..+++........ ... ....+..+.. +++.+..|+. +.|..|+.
T Consensus 451 ~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~ 524 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPV-VSKQITTLFRDSHKRLWIGGE-EGLSVFKQ 524 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBC-CCCCEEEEEECTTCCEEEEES-SCEEEEEE
T ss_pred CCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccccccc-CCceEEEEEECCCCCEEEEeC-CceEEEeC
Confidence 4578888773 234455555 45889999887654432210 111 1233455544 4777888887 44777764
No 492
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.67 E-value=5.6e-05 Score=73.62 Aligned_cols=190 Identities=14% Similarity=0.120 Sum_probs=119.9
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCC-CCCcceeeecc-----cCCceeeeEEEEeecCCEEEEeeCC------CcEEEEEC
Q 009274 302 DEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWNE-----EKDWRYSGIHALTTSGRYLYTGSGD------RTIKAWSL 369 (538)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~sg~~d------g~i~iwd~ 369 (538)
.+...+++++-.+++|+++|+.+. ......+.... ........-....|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 666777888889999999999654 22223332210 0011111223566888 77766655 78999999
Q ss_pred CCCceeEEecCCCC---CeEEEEEe--CCEEEEEe-------------------cCCcEEEEECCCCceeEEEecCCCCc
Q 009274 370 LDGTLSCTMSGHKS---AVSTLAVC--NGVLYSGS-------------------RDGTIRLWSLSDHSLLTVLEEDSSGA 425 (538)
Q Consensus 370 ~~~~~~~~~~~h~~---~v~~l~~~--~~~l~s~s-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~ 425 (538)
.+++.+.++..... .-+.+.|+ .+.+++.. .+.+|.+||+.+++.+.++.....+.
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999998863222 23457777 45666664 37899999999998888887642222
Q ss_pred eEEEE--EEcCCCCEEEEEe------CCCcEEEEeCCc----ceeee--ccc----------------cceE--EEEEeC
Q 009274 426 VSSVL--SLTAVQHTLVVSH------ESGSIKVWRNDK----FMKSM--QTH----------------KGSV--FAVFLE 473 (538)
Q Consensus 426 ~~~~~--~~~~~~~~l~~~~------~dg~i~iwd~~~----~~~~~--~~h----------------~~~v--~~~~~~ 473 (538)
...-+ .++|+++++++++ .+++|.+|.... ..+.+ ... .... ..+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 22223 4599999988877 456777654211 01110 000 0112 235569
Q ss_pred CCEEEEEeC-CCeEEEEecC
Q 009274 474 GKWLFTGGW-DKTVSVQELA 492 (538)
Q Consensus 474 ~~~l~sgs~-dg~v~iwd~~ 492 (538)
|++|+++.. .+.|.+||+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEeCCCCEEEEEEec
Confidence 999888886 5899999986
No 493
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.67 E-value=5.3e-05 Score=72.31 Aligned_cols=187 Identities=10% Similarity=-0.025 Sum_probs=113.1
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCcEEEEECCCCc
Q 009274 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (538)
Q Consensus 294 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~ 373 (538)
-..+..|+|+++.++++...++.|..||..++.. ..+... .......++++++++++. .+ .|.+||..+++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~~~~---~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK----TVHALP---FMGSALAKISDSKQLIAS-DD-GLFLRDTATGV 120 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE----EEEECS---SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE----EEEECC---CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc
Confidence 3467789998788888888889999999875432 111111 112234677888766654 44 49999998877
Q ss_pred eeEEecC---C-CCCeEEEEEe-CC-EEEEEec------CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 009274 374 LSCTMSG---H-KSAVSTLAVC-NG-VLYSGSR------DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (538)
Q Consensus 374 ~~~~~~~---h-~~~v~~l~~~-~~-~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 441 (538)
....... . ...+++++++ ++ ++++... .+.|..+| +++... +... .. ....++++++++.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~-~~-~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFAD-IS-IPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEE-ES-SEEEEEECTTSCEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCC-Cc-ccCCeEEcCCCCEEEE
Confidence 5433221 1 2357889998 33 4443332 24566666 454332 2211 11 2334789999987765
Q ss_pred E-eCCCcEEEEeCC--cc--------eeeeccccceEEEEEe--CCCEEEEEeCCCeEEEEecCCC
Q 009274 442 S-HESGSIKVWRND--KF--------MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (538)
Q Consensus 442 ~-~~dg~i~iwd~~--~~--------~~~~~~h~~~v~~~~~--~~~~l~sgs~dg~v~iwd~~~~ 494 (538)
+ +.++.|.+||.. .. ...+.........+.+ +|++.++...++.|.+||..+.
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 5 457889999953 21 1112223344556665 6777777666789999998543
No 494
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.62 E-value=4.9e-06 Score=80.34 Aligned_cols=243 Identities=11% Similarity=0.051 Sum_probs=149.7
Q ss_pred CCeEEEEEeecCCCcEEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCceEEEEecCC-------cCeEEEEE
Q 009274 240 KGNVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGHD-------HKVMAVVY 300 (538)
Q Consensus 240 ~~~~~i~~l~~h~~~V~~l~~~--~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~ 300 (538)
+....+.++..-..+ .+.++ +++++.+. .+++|.+||..+++.+.++..+. .....+++
T Consensus 54 ~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 333445555544456 68998 77777775 37899999999999999987541 23467899
Q ss_pred ecCCCCEEEEEcC-CCcEEE--EEccCCCCCcceeeecccCCceeeeEEEEeecCC-EEEEeeCCCcEEEEECCC-----
Q 009274 301 VDEDQPLCISGDS-GGGIFV--WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLD----- 371 (538)
Q Consensus 301 ~~~~~~~l~s~~~-dg~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~iwd~~~----- 371 (538)
+|++..++++... +..+.+ +|..+ +....... +..+.++++ .+++.+.||.+.+.|+.+
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~~------~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSAS------CFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSS------CCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECCC------ceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 9988877666544 467888 88875 12111111 112334444 566677889998999876
Q ss_pred CceeE----EecCCCCCeEEEEEe-CCEEEEEecCCcEEEEECCCCc--eeEEEecCC-----CCceE---EEEEEcCCC
Q 009274 372 GTLSC----TMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHS--LLTVLEEDS-----SGAVS---SVLSLTAVQ 436 (538)
Q Consensus 372 ~~~~~----~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~~-----~~~~~---~~~~~~~~~ 436 (538)
++... .+.....+. ... ++.++..+. +.+.+.|..+.. .+..+.... .+... ..+.+++++
T Consensus 200 ~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg 275 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp EECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred CeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence 44331 111123343 233 556566666 999999997543 222221110 00000 014799999
Q ss_pred CEEEEEeC---------CCcEEEEeCC--cceeeeccccceEEEEE--eCCC-EEEEEe-CCCeEEEEecCCCeeEeeee
Q 009274 437 HTLVVSHE---------SGSIKVWRND--KFMKSMQTHKGSVFAVF--LEGK-WLFTGG-WDKTVSVQELAGDEFEEDVI 501 (538)
Q Consensus 437 ~~l~~~~~---------dg~i~iwd~~--~~~~~~~~h~~~v~~~~--~~~~-~l~sgs-~dg~v~iwd~~~~~~~~~~~ 501 (538)
+.++++.. ++.+.++|.. +.+..+.... ...++. +||+ .+++.. .++.|.++|+.+.+......
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 98887643 2356699954 4555555433 344554 4787 566666 59999999999998776554
No 495
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.61 E-value=0.00015 Score=66.80 Aligned_cols=230 Identities=15% Similarity=0.059 Sum_probs=136.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCce-----EEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeeccc
Q 009274 263 GFLFSSSFDKSIHVWSLKDFSH-----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (538)
.+|+.+.. +.|+.++++.... ...+.........++|.++++.++++-..++.|..++........ ....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~---~~~~- 76 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT---IIRQ- 76 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE---EECT-
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE---EEEC-
Confidence 45555553 4788888765432 112222234578999998778788888888999999987543211 1111
Q ss_pred CCceeeeEEEEeecCCEEE-EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEec---CCcEEEEECCC
Q 009274 338 KDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR---DGTIRLWSLSD 411 (538)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg~i~iwd~~~ 411 (538)
........++.++++.++ +-...+.|.+++...................++++ ++.|+.+.. .+.|..+++..
T Consensus 77 -~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 77 -DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp -TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred -CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 111122456777655454 44556889999986543322222222456889998 456666654 36888888754
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEe-CCCcEEEEeCCcc-e-eeeccccceEEEEEeCCCEEEEEe-CCCeEE
Q 009274 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDKF-M-KSMQTHKGSVFAVFLEGKWLFTGG-WDKTVS 487 (538)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~-~~~~~h~~~v~~~~~~~~~l~sgs-~dg~v~ 487 (538)
. ....+...... ....++++++++.|+.+. ..+.|..+|.... . ..+..- ..-..+++++..|+.+. .++.|.
T Consensus 156 ~-~~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 156 T-NRRILAQDNLG-LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp C-CCEEEECTTCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEETTEEEEEETTTTEEE
T ss_pred C-CcEEEEECCCC-CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEEEeCCEEEEEECCCCeEE
Confidence 3 33333222122 233478999877665554 5678999996532 1 112221 22245666666666655 458999
Q ss_pred EEecCCCeeEeeee
Q 009274 488 VQELAGDEFEEDVI 501 (538)
Q Consensus 488 iwd~~~~~~~~~~~ 501 (538)
.+|..+++......
T Consensus 233 ~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 233 AMDLAISKEMDTFH 246 (267)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEeCCCCCceEEEc
Confidence 99999887665543
No 496
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.59 E-value=9.5e-06 Score=76.71 Aligned_cols=229 Identities=14% Similarity=0.163 Sum_probs=131.4
Q ss_pred eEEEEecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCcceeeecccCCceeeeEEEEeecCCEEEEeeCCCc
Q 009274 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (538)
Q Consensus 284 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 363 (538)
.+..+..+........|+++++.++++...++.|..|+.. +. ...+.... ......+++++|+++++...++.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~----~~~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT----VDVLLDAT--AFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC----EEEEEESC--SCEEEEEECTTSCEEEEETTTTE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC----EEEEeCCC--CccceeeECCCCCEEEEECCCCE
Confidence 4444555566778899999887788899899999999873 22 12221111 11234577888886666556688
Q ss_pred EEEEECCCCceeEEec---C-CCCCeEEEEEe-CC-EEEE----Eec-------------CCcEEEEECCCCceeEEEec
Q 009274 364 IKAWSLLDGTLSCTMS---G-HKSAVSTLAVC-NG-VLYS----GSR-------------DGTIRLWSLSDHSLLTVLEE 420 (538)
Q Consensus 364 i~iwd~~~~~~~~~~~---~-h~~~v~~l~~~-~~-~l~s----~s~-------------dg~i~iwd~~~~~~~~~~~~ 420 (538)
|..||.. ++...... + ....+++++++ ++ ++++ |.. .+.|..+|..+++..... .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 9999975 55322211 1 12346778888 34 5554 322 256888888777654333 1
Q ss_pred CCCCceEEEEEEcCCCCEEEEEeCC------CcEEEEeCCcc-ee---ee-ccccceEEEEE--eCCCEEEEEeCCCeEE
Q 009274 421 DSSGAVSSVLSLTAVQHTLVVSHES------GSIKVWRNDKF-MK---SM-QTHKGSVFAVF--LEGKWLFTGGWDKTVS 487 (538)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~-~~---~~-~~h~~~v~~~~--~~~~~l~sgs~dg~v~ 487 (538)
... ...++++|+++.|+++... +.|.+|+.... +. .+ ....+....+. .+|+ |.+++.+ .|.
T Consensus 187 --~~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~ 261 (305)
T 3dr2_A 187 --LDH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVC 261 (305)
T ss_dssp --ESS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEE
T ss_pred --CCC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEE
Confidence 122 2337899999988887765 68999985421 11 11 11111122344 3777 4444444 599
Q ss_pred EEecCCCeeEeeeecCCcccCCCceEEEEEeCC-EEEEEECCCeEE
Q 009274 488 VQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVK 532 (538)
Q Consensus 488 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~v~ 532 (538)
+|+..+..... .... . .+..+.+.+++ .|+.++.++..+
T Consensus 262 ~~~~~g~~~~~-~~~~----~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 262 VFDSDGQLLGH-IPTP----G-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EECTTSCEEEE-EECS----S-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EECCCCCEEEE-EECC----C-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 99986554332 2221 1 13333343444 577777765333
No 497
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.57 E-value=0.0002 Score=77.43 Aligned_cols=276 Identities=12% Similarity=0.171 Sum_probs=160.0
Q ss_pred EEEEEEc-CCEEEEEeCCCcEEEEeCCCCceEEEE-ecCCcCeEEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCccee
Q 009274 255 VTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (538)
Q Consensus 255 V~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (538)
|.++... ++.+..++.++.+..||..+++..... ..+...|.++...+++. +..|+.++.+..||..+........
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR--IWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCCeEEEeec
Confidence 8888886 666777777666899998776543321 12346688887755433 4455555558888876432111100
Q ss_pred eecccCCceeeeEEEEeecC-CEEEEeeCCCcEEEEECCCCceeEEecC-------CCCCeEEEEEe-CCEEEEEecCCc
Q 009274 333 KWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSG-------HKSAVSTLAVC-NGVLYSGSRDGT 403 (538)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~~-~~~l~s~s~dg~ 403 (538)
............+.++..+. ..+..|+.+ -|.+||..+++....... ....|.++..+ ++.+..|+.++-
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~G 331 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGG 331 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSC
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCC
Confidence 00000011112344555442 246666666 589999877654432211 23578999888 667888888888
Q ss_pred EEEEECCCCceeEEEecC----CCCceEEEEEEcCCCCEEEEEeCCCcEEEEeCCc-ceeeec---------cccceEEE
Q 009274 404 IRLWSLSDHSLLTVLEED----SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQ---------THKGSVFA 469 (538)
Q Consensus 404 i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~---------~h~~~v~~ 469 (538)
|..|+..++......... ........+...++|+ |..|+.++-|..||..+ ....+. .....|.+
T Consensus 332 l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 410 (795)
T 4a2l_A 332 LNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKA 410 (795)
T ss_dssp EEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEE
T ss_pred eEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEE
Confidence 999987665432221110 0122233356666666 55677777799998653 222221 12356888
Q ss_pred EEe--CCCEEEEEeCCCeEEEEecCCCeeEeeeecCCcccCCCceEEEEEe-CCEEEEEECCCeEEEEEc
Q 009274 470 VFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKVYYY 536 (538)
Q Consensus 470 ~~~--~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~v~vw~~ 536 (538)
+.. +++.|..|+.++.+..||..+++...........+ ...+.++... ++.|..|+.+| |.+|+.
T Consensus 411 i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~g~lwigt~~G-l~~~~~ 478 (795)
T 4a2l_A 411 VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLV-NENVYAILPDGEGNLWLGTLSA-LVRFNP 478 (795)
T ss_dssp EEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCS-CSCEEEEEECSSSCEEEEESSC-EEEEET
T ss_pred EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcC-CCeeEEEEECCCCCEEEEecCc-eeEEeC
Confidence 876 45547888888889999998876544332111122 2344555444 67788888754 777764
No 498
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.51 E-value=2.6e-05 Score=75.94 Aligned_cols=215 Identities=11% Similarity=0.085 Sum_probs=132.3
Q ss_pred CEEEEEeCCCcEEEEeCCCC----ceEEEEe-------cCCcCeEEEEEecCCCCEEEEEcCC------CcEEEEEccCC
Q 009274 263 GFLFSSSFDKSIHVWSLKDF----SHVHTFK-------GHDHKVMAVVYVDEDQPLCISGDSG------GGIFVWSFSFP 325 (538)
Q Consensus 263 ~~l~s~s~dg~i~iwd~~~~----~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~~~d------g~i~vwd~~~~ 325 (538)
..++++..+++|.++|+.+. +..++++ .....-..+..+|++ +++++..+ |.+.+.|..+.
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 34556777899999998755 5666663 111234566777866 66666554 78999998876
Q ss_pred CCCcceeeecccCCceeeeEEEEeecCCEEEEee-------------------CCCcEEEEECCCCceeEEecCC-C-CC
Q 009274 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-------------------GDRTIKAWSLLDGTLSCTMSGH-K-SA 384 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-------------------~dg~i~iwd~~~~~~~~~~~~h-~-~~ 384 (538)
+.......-..... ..--..++|+++.+++.. .+.+|.+||+.+++.+.++... . ..
T Consensus 175 ~v~~~~~~~~~~~~--~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 175 EPLGKWEIDRGDQY--LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp CEEEECCSBCTTCC--CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred eEEEEEccCCCCcc--ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 54433322111111 111246789999888875 3689999999999888887642 1 23
Q ss_pred eEEEEE--e--CCEEEEEe------cCCcEEEEECCCCce--eEEEecCC---C-------------CceEEEEEEcCCC
Q 009274 385 VSTLAV--C--NGVLYSGS------RDGTIRLWSLSDHSL--LTVLEEDS---S-------------GAVSSVLSLTAVQ 436 (538)
Q Consensus 385 v~~l~~--~--~~~l~s~s------~dg~i~iwd~~~~~~--~~~~~~~~---~-------------~~~~~~~~~~~~~ 436 (538)
...+.| + ++++++++ .+++|.+|....++. .+.+.... . +....-+.+++|+
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 456666 5 44555555 567888777655432 11111000 0 1122336899999
Q ss_pred CEEEEEeC-CCcEEEEeCC-----cceeeeccc----------------cceEEEEEeCCCEEEEEe
Q 009274 437 HTLVVSHE-SGSIKVWRND-----KFMKSMQTH----------------KGSVFAVFLEGKWLFTGG 481 (538)
Q Consensus 437 ~~l~~~~~-dg~i~iwd~~-----~~~~~~~~h----------------~~~v~~~~~~~~~l~sgs 481 (538)
++|.++.. .+.|.+||.. +.+..+... ...-..+++||++|+++.
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99988775 6899999953 223333221 123356677999999888
No 499
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.46 E-value=3.1e-08 Score=93.81 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=49.1
Q ss_pred ccccccCcchhhhhhhhhhhhcC-ccchhhhhhee-eccccccCcchhhcchhhHHHHHHHHHHHhhhcCccchHHHHHh
Q 009274 65 FSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIR-CVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFC 142 (538)
Q Consensus 65 ~~~~~~sDi~slG~~l~~lltg~-pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 142 (538)
..++.++|||||||+||+|+||+ ||.......+. ....... . .......... ......+.+++.
T Consensus 173 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~--------~~~~~~~~~li~ 238 (299)
T 3m2w_A 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR-----M-GQYEFPNPEW--------SEVSEEVKMLIR 238 (299)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSC-----T-TCCSSCHHHH--------TTSCHHHHHHHH
T ss_pred ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHh-----h-ccccCCchhc--------ccCCHHHHHHHH
Confidence 45678999999999999999999 99765433211 0000000 0 0000000000 112224788999
Q ss_pred hhhccCCCCCcchhhHHH
Q 009274 143 QCLNFDPGCRPLLTNVWK 160 (538)
Q Consensus 143 ~~l~~~p~~r~~~~~~~~ 160 (538)
+||+.+|.+||++.++.+
T Consensus 239 ~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 239 NLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHTCSSTTTSCCHHHHHT
T ss_pred HHcccChhhCCCHHHHhc
Confidence 999999999999888765
No 500
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=5.4e-06 Score=79.91 Aligned_cols=202 Identities=8% Similarity=0.018 Sum_probs=122.7
Q ss_pred cCCCcEEEEEEc-CCEEEEEe-C-----CCcEEEEeCCCCceEEEEecC------CcCeEEEEEecCCCCEEEEEc---C
Q 009274 250 GHRDCVTGLAVG-GGFLFSSS-F-----DKSIHVWSLKDFSHVHTFKGH------DHKVMAVVYVDEDQPLCISGD---S 313 (538)
Q Consensus 250 ~h~~~V~~l~~~-~~~l~s~s-~-----dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s~~---~ 313 (538)
+|...+.+++++ ...|+.+. . ++.|.+||+.+++.+..+..+ ...+..+++.++++.++++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 466789999998 34444443 3 578999999999887777542 235689999876666666665 6
Q ss_pred CCcEEEEEccCCCCCcceee-----------ecccCC------------c-eeeeEEEEeecCCEEEEeeCCC-cEEEEE
Q 009274 314 GGGIFVWSFSFPLGHEPLKK-----------WNEEKD------------W-RYSGIHALTTSGRYLYTGSGDR-TIKAWS 368 (538)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~-----------~~~~~~------------~-~~~~~~~~~~~~~~l~sg~~dg-~i~iwd 368 (538)
++.|.+||+.+++....+.. ...... + ....-++++++++.|+++..++ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 88999999876532111100 000000 0 0122368889998888877665 555554
Q ss_pred CC---CCc-----eeE--EecCCCCCeEEEEEe--CCEEEEEecCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 009274 369 LL---DGT-----LSC--TMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (538)
Q Consensus 369 ~~---~~~-----~~~--~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (538)
.. .+. ... ...++......++++ +.++++...++.|.+||..+++........ .......+++.+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g 302 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDG 302 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTS
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCC
Confidence 31 111 000 111334455678888 457777778899999998666643333322 12223346888888
Q ss_pred CEEEEEeCCCcEEEEe
Q 009274 437 HTLVVSHESGSIKVWR 452 (538)
Q Consensus 437 ~~l~~~~~dg~i~iwd 452 (538)
.++++.+..+.+.+|.
T Consensus 303 ~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 303 YLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CEEEEECCGGGSGGGB
T ss_pred cEEEEeCccccccccc
Confidence 8887776655544443
Done!