Query 009279
Match_columns 538
No_of_seqs 354 out of 2452
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 22:54:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009279.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009279hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hv4_A UDP-N-acetylmuramate--L 100.0 1.4E-69 4.7E-74 586.1 47.4 404 72-515 19-433 (494)
2 1p3d_A UDP-N-acetylmuramate--a 100.0 6.5E-66 2.2E-70 555.6 47.9 401 75-515 18-424 (475)
3 3hn7_A UDP-N-acetylmuramate-L- 100.0 1.1E-65 3.8E-70 559.1 46.5 383 74-496 18-452 (524)
4 2f00_A UDP-N-acetylmuramate--L 100.0 1.2E-65 4.1E-70 555.6 46.0 400 75-514 19-429 (491)
5 1j6u_A UDP-N-acetylmuramate-al 100.0 7.7E-64 2.6E-68 538.1 47.4 388 76-515 13-408 (469)
6 3lk7_A UDP-N-acetylmuramoylala 100.0 4.7E-59 1.6E-63 498.9 34.2 363 76-495 10-380 (451)
7 3eag_A UDP-N-acetylmuramate:L- 100.0 4.8E-54 1.7E-58 441.2 37.1 307 73-420 2-325 (326)
8 2x5o_A UDP-N-acetylmuramoylala 100.0 5.9E-54 2E-58 458.0 22.3 360 76-496 6-372 (439)
9 2wtz_A UDP-N-acetylmuramoyl-L- 100.0 3.5E-51 1.2E-55 446.3 27.9 391 40-499 27-452 (535)
10 1e8c_A UDP-N-acetylmuramoylala 100.0 5.4E-51 1.8E-55 441.7 27.1 368 65-499 18-417 (498)
11 1gg4_A UDP-N-acetylmuramoylala 100.0 4.7E-50 1.6E-54 429.3 33.3 379 46-498 3-395 (452)
12 2am1_A SP protein, UDP-N-acety 100.0 7E-49 2.4E-53 420.7 21.1 369 47-497 3-390 (454)
13 2vos_A Folylpolyglutamate synt 100.0 2.5E-43 8.7E-48 379.8 37.0 298 171-512 54-419 (487)
14 1o5z_A Folylpolyglutamate synt 100.0 3.8E-43 1.3E-47 374.5 32.4 296 172-514 43-391 (442)
15 1jbw_A Folylpolyglutamate synt 100.0 8.1E-43 2.8E-47 370.9 30.1 284 172-499 30-372 (428)
16 3nrs_A Dihydrofolate:folylpoly 100.0 3.6E-41 1.2E-45 358.8 28.6 282 172-499 43-382 (437)
17 1w78_A FOLC bifunctional prote 100.0 1.8E-40 6.1E-45 352.3 31.3 276 171-499 39-361 (422)
18 3mvn_A UDP-N-acetylmuramate:L- 99.6 2E-16 6.9E-21 145.3 8.8 90 406-495 11-101 (163)
19 1pjq_A CYSG, siroheme synthase 98.7 1.6E-08 5.4E-13 107.7 6.5 127 70-206 9-146 (457)
20 1kyq_A Met8P, siroheme biosynt 97.7 5.4E-06 1.8E-10 81.7 0.5 128 76-205 14-183 (274)
21 3dfz_A SIRC, precorrin-2 dehyd 97.7 0.0001 3.4E-09 70.4 9.1 126 67-206 25-164 (223)
22 3g0o_A 3-hydroxyisobutyrate de 95.6 0.094 3.2E-06 51.9 12.3 115 75-208 7-121 (303)
23 4gbj_A 6-phosphogluconate dehy 94.7 0.14 4.9E-06 50.6 10.4 112 76-209 6-117 (297)
24 4ezb_A Uncharacterized conserv 94.4 0.14 4.8E-06 51.1 9.6 110 76-209 25-141 (317)
25 3ic5_A Putative saccharopine d 94.1 0.047 1.6E-06 45.2 4.7 70 76-149 6-78 (118)
26 3fwz_A Inner membrane protein 93.8 0.46 1.6E-05 41.0 10.5 71 76-149 8-80 (140)
27 3pef_A 6-phosphogluconate dehy 93.7 0.23 7.8E-06 48.6 9.5 113 76-208 2-114 (287)
28 2p4q_A 6-phosphogluconate dehy 93.5 0.4 1.4E-05 51.0 11.5 114 76-209 11-129 (497)
29 4dll_A 2-hydroxy-3-oxopropiona 93.5 0.32 1.1E-05 48.5 10.3 113 76-209 32-144 (320)
30 3qha_A Putative oxidoreductase 93.4 0.26 9.1E-06 48.5 9.4 109 76-208 16-124 (296)
31 3g79_A NDP-N-acetyl-D-galactos 93.3 0.88 3E-05 48.0 13.7 117 74-208 17-168 (478)
32 3ggo_A Prephenate dehydrogenas 93.3 0.36 1.2E-05 48.1 10.3 108 76-205 34-144 (314)
33 2h78_A Hibadh, 3-hydroxyisobut 93.1 0.4 1.4E-05 47.1 10.3 114 76-209 4-117 (302)
34 4gwg_A 6-phosphogluconate dehy 93.1 0.35 1.2E-05 51.2 10.1 116 76-209 5-123 (484)
35 3obb_A Probable 3-hydroxyisobu 93.1 0.33 1.1E-05 48.0 9.4 114 76-209 4-117 (300)
36 2zyd_A 6-phosphogluconate dehy 92.9 0.34 1.2E-05 51.3 9.7 114 76-209 16-133 (480)
37 4e21_A 6-phosphogluconate dehy 92.7 0.33 1.1E-05 49.4 9.0 117 72-209 19-135 (358)
38 3llv_A Exopolyphosphatase-rela 92.3 0.38 1.3E-05 41.3 7.7 71 76-149 7-79 (141)
39 2g5c_A Prephenate dehydrogenas 92.2 0.81 2.8E-05 44.3 11.0 108 76-205 2-112 (281)
40 1mv8_A GMD, GDP-mannose 6-dehy 91.8 0.63 2.2E-05 48.5 10.2 114 77-208 2-144 (436)
41 2pgd_A 6-phosphogluconate dehy 91.8 1.3 4.4E-05 46.8 12.5 113 77-209 4-121 (482)
42 3c85_A Putative glutathione-re 91.6 1 3.5E-05 40.4 10.2 71 76-148 40-113 (183)
43 3doj_A AT3G25530, dehydrogenas 91.5 0.66 2.3E-05 45.9 9.5 113 76-208 22-134 (310)
44 3pdu_A 3-hydroxyisobutyrate de 91.2 0.25 8.7E-06 48.2 6.0 113 77-209 3-115 (287)
45 3qsg_A NAD-binding phosphogluc 91.0 0.51 1.7E-05 46.8 8.0 108 76-206 25-134 (312)
46 1vpd_A Tartronate semialdehyde 90.7 0.75 2.5E-05 44.9 8.8 112 77-208 7-118 (299)
47 3fwy_A Light-independent proto 90.6 0.25 8.5E-06 49.3 5.3 34 180-213 47-82 (314)
48 3l6d_A Putative oxidoreductase 90.6 0.53 1.8E-05 46.5 7.7 112 76-209 10-121 (306)
49 3cky_A 2-hydroxymethyl glutara 90.3 1 3.5E-05 44.0 9.5 113 76-208 5-117 (301)
50 2cvz_A Dehydrogenase, 3-hydrox 90.3 1.2 4.2E-05 43.0 10.0 106 77-207 3-108 (289)
51 1b0a_A Protein (fold bifunctio 90.2 1.1 3.7E-05 43.8 9.3 120 75-206 159-279 (288)
52 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.5 1.6 5.4E-05 46.1 10.6 114 77-208 3-122 (478)
53 1i36_A Conserved hypothetical 89.4 0.58 2E-05 44.9 6.7 62 77-148 2-64 (264)
54 3kkj_A Amine oxidase, flavin-c 89.4 0.25 8.6E-06 45.8 4.0 30 77-107 4-33 (336)
55 3gg2_A Sugar dehydrogenase, UD 88.9 3 0.0001 43.5 12.3 32 76-108 3-34 (450)
56 3e8x_A Putative NAD-dependent 88.6 6.7 0.00023 36.3 13.5 78 69-152 17-96 (236)
57 1xjc_A MOBB protein homolog; s 88.6 0.53 1.8E-05 42.4 5.3 35 180-214 3-39 (169)
58 1lss_A TRK system potassium up 88.3 0.9 3.1E-05 38.3 6.5 71 76-149 5-78 (140)
59 3of5_A Dethiobiotin synthetase 88.3 0.44 1.5E-05 45.1 4.9 34 180-213 3-39 (228)
60 3k6j_A Protein F01G10.3, confi 88.2 2.3 7.8E-05 44.6 10.7 34 76-110 55-88 (460)
61 1np3_A Ketol-acid reductoisome 88.1 0.66 2.3E-05 46.6 6.3 69 69-148 12-80 (338)
62 3l07_A Bifunctional protein fo 88.0 0.62 2.1E-05 45.6 5.7 117 75-206 161-280 (285)
63 1a4i_A Methylenetetrahydrofola 87.9 0.77 2.7E-05 45.2 6.4 124 75-206 165-291 (301)
64 4a7p_A UDP-glucose dehydrogena 87.8 4.1 0.00014 42.5 12.3 35 75-110 8-42 (446)
65 3l9w_A Glutathione-regulated p 87.6 0.69 2.4E-05 47.9 6.2 71 76-149 5-77 (413)
66 1wwk_A Phosphoglycerate dehydr 87.5 0.88 3E-05 45.1 6.7 108 76-207 143-250 (307)
67 1byi_A Dethiobiotin synthase; 87.4 0.52 1.8E-05 43.8 4.7 31 182-212 2-35 (224)
68 3d4o_A Dipicolinate synthase s 87.3 1.1 3.6E-05 44.0 7.2 67 75-148 155-221 (293)
69 3fgn_A Dethiobiotin synthetase 87.1 0.6 2E-05 44.9 5.0 35 179-213 24-61 (251)
70 3ojo_A CAP5O; rossmann fold, c 87.1 5.1 0.00018 41.5 12.5 112 77-209 13-150 (431)
71 1lld_A L-lactate dehydrogenase 86.9 5.8 0.0002 38.9 12.4 115 76-201 8-136 (319)
72 1zej_A HBD-9, 3-hydroxyacyl-CO 86.9 1.4 4.8E-05 43.3 7.7 70 75-158 12-88 (293)
73 2ewd_A Lactate dehydrogenase,; 86.9 8.3 0.00028 37.9 13.5 71 76-153 5-85 (317)
74 4dzz_A Plasmid partitioning pr 86.9 0.62 2.1E-05 42.4 4.8 33 181-213 1-36 (206)
75 1yb4_A Tartronic semialdehyde 86.7 1.1 3.8E-05 43.5 6.9 111 76-207 4-114 (295)
76 2uyy_A N-PAC protein; long-cha 86.5 2.5 8.7E-05 41.5 9.5 113 76-208 31-143 (316)
77 3p2o_A Bifunctional protein fo 86.3 0.7 2.4E-05 45.2 5.0 115 75-206 160-280 (285)
78 2dbq_A Glyoxylate reductase; D 86.3 0.73 2.5E-05 46.3 5.4 107 76-206 151-257 (334)
79 2iz1_A 6-phosphogluconate dehy 86.3 2 6.7E-05 45.3 9.0 113 76-208 6-122 (474)
80 2hjr_A Malate dehydrogenase; m 86.3 5 0.00017 39.9 11.6 70 76-152 15-94 (328)
81 2hmt_A YUAA protein; RCK, KTN, 86.2 0.99 3.4E-05 38.2 5.6 72 76-150 7-80 (144)
82 1dlj_A UDP-glucose dehydrogena 86.2 2.4 8.4E-05 43.5 9.4 42 77-121 2-43 (402)
83 3hwr_A 2-dehydropantoate 2-red 86.0 1.3 4.5E-05 43.9 7.0 52 70-124 14-65 (318)
84 2obn_A Hypothetical protein; s 85.9 0.8 2.7E-05 46.2 5.4 81 111-212 94-186 (349)
85 4a5o_A Bifunctional protein fo 85.8 1 3.6E-05 43.9 6.0 117 76-206 162-281 (286)
86 2f1k_A Prephenate dehydrogenas 85.7 4.3 0.00015 38.9 10.5 64 77-148 2-65 (279)
87 3vtf_A UDP-glucose 6-dehydroge 85.5 2.8 9.5E-05 43.7 9.4 114 75-206 21-162 (444)
88 3b1f_A Putative prephenate deh 85.4 6.2 0.00021 38.0 11.6 106 76-205 7-117 (290)
89 1f0y_A HCDH, L-3-hydroxyacyl-C 85.3 4 0.00014 39.9 10.2 33 76-109 16-48 (302)
90 2ph1_A Nucleotide-binding prot 85.2 1.4 4.7E-05 42.2 6.6 40 174-213 11-53 (262)
91 2g1u_A Hypothetical protein TM 85.2 1.1 3.9E-05 39.0 5.5 72 75-149 19-93 (155)
92 2g76_A 3-PGDH, D-3-phosphoglyc 85.2 1.3 4.5E-05 44.4 6.6 107 76-206 166-272 (335)
93 1guz_A Malate dehydrogenase; o 85.1 12 0.0004 36.8 13.5 68 77-152 2-81 (310)
94 3qxc_A Dethiobiotin synthetase 85.1 0.88 3E-05 43.5 5.0 35 179-213 19-56 (242)
95 2ekl_A D-3-phosphoglycerate de 84.9 1 3.6E-05 44.7 5.7 108 76-207 143-250 (313)
96 2d0i_A Dehydrogenase; structur 84.5 1.1 3.8E-05 44.9 5.7 106 76-206 147-252 (333)
97 1g3q_A MIND ATPase, cell divis 84.1 1.1 3.6E-05 41.9 5.1 32 182-213 3-37 (237)
98 1id1_A Putative potassium chan 83.9 1.5 5.3E-05 38.0 5.8 51 76-127 4-57 (153)
99 4dgk_A Phytoene dehydrogenase; 83.9 0.63 2.2E-05 48.9 3.7 32 76-108 2-33 (501)
100 3ktd_A Prephenate dehydrogenas 83.8 1.4 4.7E-05 44.4 6.0 47 75-123 8-54 (341)
101 2gcg_A Glyoxylate reductase/hy 83.6 1.6 5.6E-05 43.5 6.5 109 76-207 156-264 (330)
102 1wcv_1 SOJ, segregation protei 83.0 0.98 3.4E-05 43.1 4.4 34 180-213 5-41 (257)
103 3phh_A Shikimate dehydrogenase 82.9 3 0.0001 40.4 7.9 62 75-147 118-179 (269)
104 3ea0_A ATPase, para family; al 82.6 1.1 3.6E-05 42.1 4.5 34 180-213 3-40 (245)
105 3tri_A Pyrroline-5-carboxylate 82.4 4.9 0.00017 38.9 9.3 64 76-148 4-71 (280)
106 3i83_A 2-dehydropantoate 2-red 82.3 4.7 0.00016 39.8 9.3 44 76-123 3-46 (320)
107 3bfv_A CAPA1, CAPB2, membrane 82.3 1.5 5.1E-05 42.5 5.5 34 179-212 80-116 (271)
108 1a5z_A L-lactate dehydrogenase 82.1 9.7 0.00033 37.6 11.5 67 77-152 2-79 (319)
109 3pid_A UDP-glucose 6-dehydroge 81.7 6.7 0.00023 40.7 10.4 31 76-108 37-67 (432)
110 3cio_A ETK, tyrosine-protein k 81.6 1.5 5E-05 43.2 5.2 34 180-213 103-139 (299)
111 3oj0_A Glutr, glutamyl-tRNA re 81.4 0.62 2.1E-05 40.2 2.1 67 76-149 22-89 (144)
112 2rir_A Dipicolinate synthase, 81.3 2.5 8.5E-05 41.5 6.7 67 75-148 157-223 (300)
113 3la6_A Tyrosine-protein kinase 81.0 1.3 4.4E-05 43.4 4.5 34 179-212 90-126 (286)
114 1ps9_A 2,4-dienoyl-COA reducta 80.5 4.2 0.00014 44.7 8.9 125 75-209 373-519 (671)
115 1hyq_A MIND, cell division inh 80.5 1.6 5.4E-05 41.5 4.9 32 182-213 3-37 (263)
116 3mog_A Probable 3-hydroxybutyr 80.2 7.9 0.00027 40.7 10.6 33 76-109 6-38 (483)
117 2y0c_A BCEC, UDP-glucose dehyd 80.2 11 0.00038 39.5 11.8 33 75-108 8-40 (478)
118 2pv7_A T-protein [includes: ch 80.0 7.2 0.00024 38.0 9.6 33 76-109 22-55 (298)
119 3hn2_A 2-dehydropantoate 2-red 80.0 4.2 0.00014 40.0 7.9 45 76-124 3-47 (312)
120 3q9l_A Septum site-determining 80.0 1.8 6.3E-05 40.8 5.1 32 182-213 3-37 (260)
121 3l4b_C TRKA K+ channel protien 79.9 3 0.0001 38.5 6.5 70 77-149 2-74 (218)
122 2o3j_A UDP-glucose 6-dehydroge 79.8 6.2 0.00021 41.5 9.6 32 76-108 10-43 (481)
123 2oze_A ORF delta'; para, walke 79.8 1.7 5.9E-05 42.2 5.0 33 181-213 34-71 (298)
124 3c24_A Putative oxidoreductase 79.6 2.8 9.4E-05 40.6 6.4 63 76-148 12-75 (286)
125 1zu4_A FTSY; GTPase, signal re 79.5 2 6.7E-05 42.8 5.3 32 180-211 104-137 (320)
126 3end_A Light-independent proto 79.4 2 6.8E-05 42.1 5.3 34 180-213 40-75 (307)
127 3ngx_A Bifunctional protein fo 79.3 3.4 0.00012 40.1 6.7 118 76-206 151-269 (276)
128 4huj_A Uncharacterized protein 79.2 2 6.9E-05 40.0 5.0 64 76-148 24-89 (220)
129 1yqg_A Pyrroline-5-carboxylate 79.0 3.6 0.00012 39.1 6.9 62 77-148 2-65 (263)
130 2v6b_A L-LDH, L-lactate dehydr 78.7 9.8 0.00034 37.2 10.2 32 77-109 2-35 (304)
131 1t2d_A LDH-P, L-lactate dehydr 78.7 6.9 0.00024 38.8 9.1 71 76-153 5-85 (322)
132 2xj4_A MIPZ; replication, cell 78.6 1.9 6.5E-05 41.9 4.8 33 181-213 4-39 (286)
133 2w2k_A D-mandelate dehydrogena 78.5 2.1 7.2E-05 43.1 5.3 108 76-205 164-272 (348)
134 2afh_E Nitrogenase iron protei 78.5 2.2 7.5E-05 41.3 5.3 33 181-213 2-36 (289)
135 3ghy_A Ketopantoate reductase 78.4 2.4 8.3E-05 42.2 5.7 46 76-124 4-49 (335)
136 3tum_A Shikimate dehydrogenase 78.2 8.5 0.00029 37.1 9.3 33 75-108 125-158 (269)
137 2pi1_A D-lactate dehydrogenase 78.0 3.3 0.00011 41.5 6.5 106 76-206 142-247 (334)
138 1cp2_A CP2, nitrogenase iron p 77.9 2.1 7.1E-05 40.9 4.8 32 182-213 2-35 (269)
139 3ius_A Uncharacterized conserv 77.7 30 0.001 32.6 13.2 69 76-151 6-74 (286)
140 1vma_A Cell division protein F 77.5 2.5 8.5E-05 41.8 5.3 32 180-211 103-136 (306)
141 1leh_A Leucine dehydrogenase; 77.4 2.7 9.4E-05 42.6 5.7 104 76-208 174-278 (364)
142 4a26_A Putative C-1-tetrahydro 77.4 7.1 0.00024 38.3 8.4 124 75-206 165-293 (300)
143 3sho_A Transcriptional regulat 77.1 15 0.00052 32.6 10.3 32 75-106 39-72 (187)
144 3ego_A Probable 2-dehydropanto 76.9 4.6 0.00016 39.6 7.2 46 76-124 3-48 (307)
145 3oz2_A Digeranylgeranylglycero 76.8 1.7 5.7E-05 43.5 4.0 31 77-108 6-36 (397)
146 4hb9_A Similarities with proba 76.8 1.7 6E-05 43.7 4.1 31 76-107 2-32 (412)
147 3p7m_A Malate dehydrogenase; p 76.8 8.7 0.0003 38.1 9.1 71 76-153 6-86 (321)
148 3k9g_A PF-32 protein; ssgcid, 76.8 2 6.7E-05 41.1 4.3 34 179-213 25-61 (267)
149 3euw_A MYO-inositol dehydrogen 76.5 3.1 0.0001 41.5 5.8 88 76-169 5-94 (344)
150 3ba1_A HPPR, hydroxyphenylpyru 75.9 4.3 0.00015 40.5 6.7 106 76-208 165-270 (333)
151 4dio_A NAD(P) transhydrogenase 75.9 4 0.00014 42.0 6.4 47 75-123 190-236 (405)
152 1hyh_A L-hicdh, L-2-hydroxyiso 75.7 9.2 0.00032 37.4 9.0 32 76-108 2-35 (309)
153 3tl2_A Malate dehydrogenase; c 75.6 6.2 0.00021 39.1 7.6 73 74-153 7-91 (315)
154 3ka7_A Oxidoreductase; structu 75.6 2 6.9E-05 43.8 4.2 30 77-107 2-31 (425)
155 1zcj_A Peroxisomal bifunctiona 75.3 7.8 0.00027 40.5 8.7 33 76-109 38-70 (463)
156 3gvi_A Malate dehydrogenase; N 75.1 9.3 0.00032 37.9 8.8 71 76-153 8-88 (324)
157 1rz3_A Hypothetical protein rb 75.1 3.1 0.00011 37.9 5.0 31 180-210 21-53 (201)
158 2vns_A Metalloreductase steap3 75.0 2.1 7.3E-05 39.7 3.9 63 76-148 29-91 (215)
159 3jtm_A Formate dehydrogenase, 74.5 5.1 0.00017 40.3 6.8 110 76-207 165-274 (351)
160 3cwq_A Para family chromosome 74.5 2.9 9.8E-05 38.5 4.6 30 183-213 2-34 (209)
161 1edz_A 5,10-methylenetetrahydr 74.5 23 0.00079 35.0 11.4 106 75-206 177-311 (320)
162 3abi_A Putative uncharacterize 74.4 1.4 4.9E-05 44.5 2.7 39 68-108 9-47 (365)
163 1z82_A Glycerol-3-phosphate de 74.3 4.1 0.00014 40.5 6.0 44 76-121 15-58 (335)
164 3p2y_A Alanine dehydrogenase/p 74.1 3.6 0.00012 41.9 5.5 48 75-124 184-231 (381)
165 1tlt_A Putative oxidoreductase 73.8 3.1 0.00011 41.0 4.9 66 75-148 5-73 (319)
166 1mx3_A CTBP1, C-terminal bindi 73.8 3.5 0.00012 41.5 5.3 110 76-208 169-278 (347)
167 1pzg_A LDH, lactate dehydrogen 73.8 5.4 0.00018 39.8 6.7 71 75-152 9-90 (331)
168 3nrn_A Uncharacterized protein 73.8 2.3 7.9E-05 43.4 4.1 30 77-107 2-31 (421)
169 3nks_A Protoporphyrinogen oxid 73.4 2.4 8.2E-05 44.0 4.2 31 76-107 3-35 (477)
170 2px0_A Flagellar biosynthesis 73.3 3.5 0.00012 40.4 5.2 33 180-212 104-139 (296)
171 1xea_A Oxidoreductase, GFO/IDH 73.3 3.1 0.00011 41.1 4.8 86 76-168 3-91 (323)
172 3don_A Shikimate dehydrogenase 73.2 21 0.00073 34.4 10.7 96 76-174 118-236 (277)
173 3two_A Mannitol dehydrogenase; 72.8 8.2 0.00028 38.3 7.9 68 76-151 178-245 (348)
174 3dme_A Conserved exported prot 72.8 2.6 9E-05 41.6 4.2 31 76-107 5-35 (369)
175 3fkq_A NTRC-like two-domain pr 72.6 3.3 0.00011 41.9 4.9 34 180-213 142-178 (373)
176 3ond_A Adenosylhomocysteinase; 72.5 7.7 0.00026 40.8 7.7 64 76-149 266-329 (488)
177 1wdk_A Fatty oxidation complex 72.4 13 0.00046 41.1 10.1 34 75-109 314-347 (715)
178 3ew7_A LMO0794 protein; Q8Y8U8 72.4 21 0.00071 32.1 10.1 72 77-153 2-74 (221)
179 1bg6_A N-(1-D-carboxylethyl)-L 72.3 13 0.00045 36.7 9.3 42 76-119 5-46 (359)
180 2ahr_A Putative pyrroline carb 72.3 1.8 6.2E-05 41.2 2.7 64 76-148 4-68 (259)
181 1c0p_A D-amino acid oxidase; a 72.0 3 0.0001 41.6 4.4 31 76-107 7-37 (363)
182 3d0o_A L-LDH 1, L-lactate dehy 71.9 20 0.00068 35.3 10.4 70 76-153 7-87 (317)
183 2qyt_A 2-dehydropantoate 2-red 71.8 3.1 0.00011 40.6 4.4 46 76-124 9-61 (317)
184 3nyc_A D-arginine dehydrogenas 71.4 1.7 5.8E-05 43.4 2.4 32 75-108 9-40 (381)
185 2c2x_A Methylenetetrahydrofola 71.4 4.3 0.00015 39.5 5.1 116 75-206 158-278 (281)
186 4e5n_A Thermostable phosphite 71.4 2.5 8.5E-05 42.3 3.5 109 76-207 146-254 (330)
187 3c8u_A Fructokinase; YP_612366 71.3 5.2 0.00018 36.6 5.5 30 180-209 21-52 (208)
188 1oju_A MDH, malate dehydrogena 71.3 8.4 0.00029 37.7 7.3 70 77-153 2-82 (294)
189 2dpo_A L-gulonate 3-dehydrogen 71.3 3.4 0.00012 41.1 4.5 33 76-109 7-39 (319)
190 2q3e_A UDP-glucose 6-dehydroge 71.2 7.8 0.00027 40.5 7.5 32 76-108 6-39 (467)
191 3e9m_A Oxidoreductase, GFO/IDH 71.1 3.3 0.00011 41.1 4.4 89 75-169 5-96 (330)
192 2oln_A NIKD protein; flavoprot 71.0 2.8 9.7E-05 42.3 4.0 30 77-107 6-35 (397)
193 3pg5_A Uncharacterized protein 70.7 2.2 7.5E-05 43.1 3.0 33 181-213 1-36 (361)
194 3kl4_A SRP54, signal recogniti 70.7 3.9 0.00013 42.4 5.0 33 181-213 97-131 (433)
195 4b4u_A Bifunctional protein fo 70.7 4.5 0.00015 39.7 5.1 117 76-206 180-298 (303)
196 2yjz_A Metalloreductase steap4 73.4 0.87 3E-05 42.1 0.0 62 76-148 20-81 (201)
197 1gdh_A D-glycerate dehydrogena 70.5 5.4 0.00018 39.6 5.8 109 76-207 147-256 (320)
198 3ce6_A Adenosylhomocysteinase; 70.5 5.1 0.00018 42.3 5.9 64 76-149 275-338 (494)
199 2aef_A Calcium-gated potassium 70.4 7.1 0.00024 36.3 6.4 69 76-149 10-80 (234)
200 3h9u_A Adenosylhomocysteinase; 70.3 5 0.00017 41.6 5.6 64 76-149 212-275 (436)
201 3ez9_A Para; DNA binding, wing 70.3 3 0.0001 42.6 4.0 37 177-213 107-152 (403)
202 1np6_A Molybdopterin-guanine d 70.1 5.9 0.0002 35.5 5.5 34 180-213 5-40 (174)
203 1y56_B Sarcosine oxidase; dehy 70.1 3.2 0.00011 41.5 4.1 32 76-108 6-37 (382)
204 1gpj_A Glutamyl-tRNA reductase 70.0 2.5 8.6E-05 43.4 3.3 47 76-123 168-215 (404)
205 2e1m_A L-glutamate oxidase; L- 70.0 3.6 0.00012 41.9 4.4 32 75-107 44-75 (376)
206 3ug7_A Arsenical pump-driving 70.0 4.9 0.00017 40.3 5.5 36 179-214 23-61 (349)
207 3q2i_A Dehydrogenase; rossmann 69.9 3.3 0.00011 41.5 4.1 90 73-169 11-104 (354)
208 3i6d_A Protoporphyrinogen oxid 69.9 1.8 6.3E-05 44.6 2.3 31 76-107 6-42 (470)
209 3uuw_A Putative oxidoreductase 69.6 2.6 9E-05 41.2 3.3 85 76-169 7-95 (308)
210 2izz_A Pyrroline-5-carboxylate 69.6 5.8 0.0002 39.2 5.8 65 76-148 23-92 (322)
211 2hk9_A Shikimate dehydrogenase 69.5 3.4 0.00012 39.9 4.0 32 76-108 130-161 (275)
212 3vku_A L-LDH, L-lactate dehydr 69.4 10 0.00035 37.7 7.5 87 76-170 10-107 (326)
213 3itj_A Thioredoxin reductase 1 69.3 3 0.0001 40.7 3.6 31 76-107 23-53 (338)
214 2i6t_A Ubiquitin-conjugating e 69.3 13 0.00045 36.4 8.3 69 76-151 15-88 (303)
215 1ryi_A Glycine oxidase; flavop 69.3 3.5 0.00012 41.2 4.2 32 76-108 18-49 (382)
216 1ur5_A Malate dehydrogenase; o 69.3 14 0.00049 36.2 8.6 71 76-153 3-83 (309)
217 1ygy_A PGDH, D-3-phosphoglycer 69.2 2.3 8E-05 45.4 3.0 62 76-148 143-204 (529)
218 1l7d_A Nicotinamide nucleotide 68.7 7.2 0.00025 39.6 6.5 47 76-124 173-219 (384)
219 3d1l_A Putative NADP oxidoredu 68.7 7.5 0.00026 36.9 6.3 63 77-148 12-76 (266)
220 3nix_A Flavoprotein/dehydrogen 68.7 3.4 0.00012 41.9 4.0 32 76-108 6-37 (421)
221 2ew2_A 2-dehydropantoate 2-red 68.6 4.7 0.00016 39.1 4.9 45 77-123 5-49 (316)
222 3dtt_A NADP oxidoreductase; st 68.6 4.2 0.00014 38.5 4.4 33 75-108 19-51 (245)
223 3r9u_A Thioredoxin reductase; 68.6 2.8 9.7E-05 40.4 3.3 32 75-107 4-36 (315)
224 2gf3_A MSOX, monomeric sarcosi 68.6 3.7 0.00013 41.1 4.2 30 77-107 5-34 (389)
225 2jae_A L-amino acid oxidase; o 68.3 3.7 0.00013 42.8 4.3 31 76-107 12-42 (489)
226 3v76_A Flavoprotein; structura 68.2 3.5 0.00012 42.6 3.9 33 76-109 28-60 (417)
227 1s3e_A Amine oxidase [flavin-c 68.2 3.5 0.00012 43.5 4.1 31 76-107 5-35 (520)
228 1yvv_A Amine oxidase, flavin-c 68.1 3.7 0.00013 40.1 4.1 31 77-108 4-34 (336)
229 2f1r_A Molybdopterin-guanine d 68.0 4.5 0.00015 36.2 4.2 32 181-212 2-35 (171)
230 1a7j_A Phosphoribulokinase; tr 68.0 4.1 0.00014 39.8 4.2 30 180-209 4-35 (290)
231 3ihm_A Styrene monooxygenase A 68.0 3.3 0.00011 42.6 3.8 32 76-108 23-54 (430)
232 3pwz_A Shikimate dehydrogenase 68.0 28 0.00095 33.5 10.2 33 75-108 120-153 (272)
233 3ec7_A Putative dehydrogenase; 68.0 5 0.00017 40.3 5.0 90 75-170 23-117 (357)
234 1x13_A NAD(P) transhydrogenase 67.9 6.9 0.00023 40.1 6.1 47 76-124 173-219 (401)
235 4e12_A Diketoreductase; oxidor 67.9 4.3 0.00015 39.3 4.4 33 76-109 5-37 (283)
236 3k7m_X 6-hydroxy-L-nicotine ox 67.9 3.9 0.00013 41.7 4.2 30 77-107 3-32 (431)
237 3rp8_A Flavoprotein monooxygen 67.9 3.7 0.00013 41.6 4.1 32 76-108 24-55 (407)
238 2b9w_A Putative aminooxidase; 67.8 3.8 0.00013 41.7 4.2 31 76-107 7-38 (424)
239 1rsg_A FMS1 protein; FAD bindi 67.6 3.8 0.00013 43.2 4.2 31 76-107 9-40 (516)
240 3e18_A Oxidoreductase; dehydro 67.6 3.3 0.00011 41.7 3.6 89 75-170 5-95 (359)
241 2ph5_A Homospermidine synthase 67.5 13 0.00044 39.0 8.0 91 76-170 14-113 (480)
242 3fbs_A Oxidoreductase; structu 67.5 3.9 0.00013 38.9 4.0 31 76-107 3-33 (297)
243 3cea_A MYO-inositol 2-dehydrog 67.4 4.4 0.00015 40.3 4.4 70 74-148 7-79 (346)
244 2vou_A 2,6-dihydroxypyridine h 67.4 4.5 0.00015 40.9 4.6 32 76-108 6-37 (397)
245 2ivd_A PPO, PPOX, protoporphyr 67.3 3.7 0.00012 42.6 4.0 31 76-107 17-47 (478)
246 3dm5_A SRP54, signal recogniti 67.3 5.5 0.00019 41.4 5.2 34 181-214 100-135 (443)
247 3f8d_A Thioredoxin reductase ( 66.9 4.1 0.00014 39.3 4.0 31 76-107 16-46 (323)
248 2vvm_A Monoamine oxidase N; FA 66.8 4.4 0.00015 42.3 4.5 31 76-107 40-70 (495)
249 3lzw_A Ferredoxin--NADP reduct 66.7 4.3 0.00015 39.4 4.2 32 76-108 8-39 (332)
250 4hy3_A Phosphoglycerate oxidor 66.7 7.1 0.00024 39.5 5.8 108 76-207 177-284 (365)
251 3ldh_A Lactate dehydrogenase; 66.2 11 0.00037 37.6 7.0 70 76-152 22-101 (330)
252 3zq6_A Putative arsenical pump 66.1 5.8 0.0002 39.2 5.0 33 182-214 14-49 (324)
253 2pez_A Bifunctional 3'-phospho 66.1 7.5 0.00026 34.3 5.3 30 181-210 5-36 (179)
254 2g0t_A Conserved hypothetical 66.0 5.8 0.0002 39.9 4.9 33 180-212 168-203 (350)
255 2uzz_A N-methyl-L-tryptophan o 65.6 3.3 0.00011 41.2 3.2 31 77-108 4-34 (372)
256 1vim_A Hypothetical protein AF 65.5 21 0.00073 32.2 8.5 16 75-90 47-62 (200)
257 2d5c_A AROE, shikimate 5-dehyd 65.5 8 0.00027 36.9 5.7 31 77-108 118-148 (263)
258 3cgv_A Geranylgeranyl reductas 65.5 4.6 0.00016 40.5 4.2 31 77-108 6-36 (397)
259 3rc1_A Sugar 3-ketoreductase; 65.3 4 0.00014 40.9 3.7 88 76-170 28-119 (350)
260 2yq5_A D-isomer specific 2-hyd 65.3 5.8 0.0002 39.8 4.8 107 76-208 149-255 (343)
261 2zbw_A Thioredoxin reductase; 65.1 4.6 0.00016 39.5 4.0 32 76-108 6-37 (335)
262 4g65_A TRK system potassium up 65.0 6.9 0.00024 40.9 5.5 71 76-149 4-77 (461)
263 2gf2_A Hibadh, 3-hydroxyisobut 65.0 8.3 0.00028 37.1 5.8 63 77-148 2-64 (296)
264 2vdc_G Glutamate synthase [NAD 64.7 3.9 0.00013 42.7 3.5 32 75-107 122-153 (456)
265 2z0h_A DTMP kinase, thymidylat 64.6 7.1 0.00024 34.8 4.9 28 183-210 2-31 (197)
266 2raf_A Putative dinucleotide-b 64.3 6.7 0.00023 36.1 4.7 33 75-108 19-51 (209)
267 4a5l_A Thioredoxin reductase; 64.2 4.9 0.00017 38.8 4.0 30 77-107 6-35 (314)
268 3dje_A Fructosyl amine: oxygen 64.1 4.9 0.00017 41.1 4.2 32 76-108 7-39 (438)
269 4hkt_A Inositol 2-dehydrogenas 64.0 5.3 0.00018 39.5 4.2 66 76-148 4-71 (331)
270 1c1d_A L-phenylalanine dehydro 63.9 8.9 0.0003 38.6 5.8 104 76-208 176-279 (355)
271 4gde_A UDP-galactopyranose mut 63.8 4.9 0.00017 41.9 4.2 31 77-108 12-43 (513)
272 2woo_A ATPase GET3; tail-ancho 63.7 5.8 0.0002 39.4 4.5 33 181-213 18-53 (329)
273 2vo1_A CTP synthase 1; pyrimid 63.5 7.9 0.00027 37.3 5.0 34 179-212 21-58 (295)
274 3ez2_A Plasmid partition prote 63.4 6.3 0.00022 40.1 4.8 33 180-212 107-148 (398)
275 2wtb_A MFP2, fatty acid multif 63.4 31 0.0011 38.2 10.7 33 76-109 313-345 (725)
276 1vdc_A NTR, NADPH dependent th 63.4 3.5 0.00012 40.3 2.8 31 76-107 9-39 (333)
277 3db2_A Putative NADPH-dependen 63.3 4.4 0.00015 40.5 3.5 88 75-169 5-95 (354)
278 2x3n_A Probable FAD-dependent 63.2 5.3 0.00018 40.3 4.2 32 76-108 7-38 (399)
279 2jeo_A Uridine-cytidine kinase 63.2 4.8 0.00016 37.9 3.6 24 180-203 24-49 (245)
280 3gem_A Short chain dehydrogena 63.0 8.5 0.00029 36.5 5.4 49 76-125 28-77 (260)
281 3etn_A Putative phosphosugar i 62.9 24 0.00082 32.5 8.4 31 75-105 59-91 (220)
282 3u3x_A Oxidoreductase; structu 62.9 5.4 0.00018 40.1 4.1 88 76-170 27-118 (361)
283 2yg5_A Putrescine oxidase; oxi 62.9 5.3 0.00018 41.0 4.2 31 76-107 6-36 (453)
284 3gvx_A Glycerate dehydrogenase 62.8 5.5 0.00019 39.0 4.0 107 76-209 123-229 (290)
285 3evn_A Oxidoreductase, GFO/IDH 62.8 5.2 0.00018 39.5 3.9 90 75-170 5-97 (329)
286 3pp8_A Glyoxylate/hydroxypyruv 62.6 5.9 0.0002 39.2 4.2 107 76-207 140-247 (315)
287 3alj_A 2-methyl-3-hydroxypyrid 62.5 5.5 0.00019 39.9 4.1 32 76-108 12-43 (379)
288 1sez_A Protoporphyrinogen oxid 62.3 5.6 0.00019 41.6 4.2 32 76-108 14-45 (504)
289 3hg7_A D-isomer specific 2-hyd 62.3 5.9 0.0002 39.4 4.2 32 76-108 141-172 (324)
290 3asz_A Uridine kinase; cytidin 62.2 4.8 0.00016 36.6 3.3 25 180-204 5-31 (211)
291 3nep_X Malate dehydrogenase; h 62.0 21 0.00071 35.2 8.1 69 77-152 2-81 (314)
292 3gg9_A D-3-phosphoglycerate de 62.0 6 0.0002 39.9 4.2 110 76-208 161-270 (352)
293 2bcg_G Secretory pathway GDP d 62.0 5.6 0.00019 41.3 4.1 31 77-108 13-43 (453)
294 2xdo_A TETX2 protein; tetracyc 61.9 5.9 0.0002 40.1 4.2 32 76-108 27-58 (398)
295 3dqp_A Oxidoreductase YLBE; al 61.7 29 0.001 31.3 8.7 70 77-152 2-75 (219)
296 1y6j_A L-lactate dehydrogenase 61.6 14 0.00049 36.4 6.9 70 75-152 7-86 (318)
297 1nks_A Adenylate kinase; therm 61.5 8 0.00027 34.2 4.6 29 182-210 2-32 (194)
298 3ezy_A Dehydrogenase; structur 61.4 3.8 0.00013 40.8 2.6 87 76-168 3-92 (344)
299 3qj4_A Renalase; FAD/NAD(P)-bi 61.3 5.1 0.00017 39.5 3.5 30 77-107 3-35 (342)
300 4gcm_A TRXR, thioredoxin reduc 61.2 5.6 0.00019 38.5 3.8 29 78-107 9-37 (312)
301 3evt_A Phosphoglycerate dehydr 61.2 6 0.00021 39.4 4.0 108 76-208 138-246 (324)
302 3klj_A NAD(FAD)-dependent dehy 61.2 7.8 0.00027 39.3 5.0 74 76-157 147-236 (385)
303 3bio_A Oxidoreductase, GFO/IDH 61.2 6.3 0.00022 38.7 4.1 34 75-108 9-43 (304)
304 1dxy_A D-2-hydroxyisocaproate 61.2 6.3 0.00022 39.3 4.2 33 76-109 146-178 (333)
305 3pqe_A L-LDH, L-lactate dehydr 61.2 21 0.00071 35.4 8.0 71 75-153 5-86 (326)
306 1ks9_A KPA reductase;, 2-dehyd 61.1 7.4 0.00025 37.2 4.6 32 77-109 2-33 (291)
307 3gt0_A Pyrroline-5-carboxylate 61.0 7.5 0.00026 36.6 4.5 64 76-148 3-71 (247)
308 3ps9_A TRNA 5-methylaminomethy 61.0 5.3 0.00018 43.8 3.9 31 76-107 273-303 (676)
309 4a9w_A Monooxygenase; baeyer-v 60.9 6.3 0.00021 38.5 4.1 32 76-108 4-35 (357)
310 1j4a_A D-LDH, D-lactate dehydr 60.8 7.7 0.00026 38.7 4.7 107 76-207 147-253 (333)
311 4fk1_A Putative thioredoxin re 60.8 5.8 0.0002 38.4 3.8 30 77-107 8-37 (304)
312 2ywl_A Thioredoxin reductase r 60.7 6.9 0.00024 34.5 4.0 30 77-107 3-32 (180)
313 3nkl_A UDP-D-quinovosamine 4-d 60.7 6.7 0.00023 33.2 3.8 33 73-105 2-34 (141)
314 1xdw_A NAD+-dependent (R)-2-hy 60.7 6.5 0.00022 39.2 4.2 33 76-109 147-179 (331)
315 3cty_A Thioredoxin reductase; 60.6 6.2 0.00021 38.3 4.0 31 76-107 17-47 (319)
316 4dgs_A Dehydrogenase; structur 60.6 7.7 0.00026 38.8 4.7 104 76-206 172-275 (340)
317 2ho3_A Oxidoreductase, GFO/IDH 60.5 5.7 0.00019 39.1 3.7 31 77-107 3-34 (325)
318 2xhz_A KDSD, YRBH, arabinose 5 60.5 50 0.0017 28.9 9.8 36 71-106 45-82 (183)
319 3b9q_A Chloroplast SRP recepto 60.5 9.8 0.00034 37.3 5.4 30 181-210 100-131 (302)
320 2i3b_A HCR-ntpase, human cance 60.5 5.8 0.0002 36.0 3.5 25 183-207 3-29 (189)
321 3pvc_A TRNA 5-methylaminomethy 60.4 5 0.00017 44.2 3.6 31 76-107 265-295 (689)
322 3dfu_A Uncharacterized protein 60.3 3.8 0.00013 38.7 2.2 31 76-107 7-37 (232)
323 3k30_A Histamine dehydrogenase 60.3 5.2 0.00018 44.1 3.7 32 75-107 391-422 (690)
324 3ado_A Lambda-crystallin; L-gu 60.2 7 0.00024 38.8 4.2 33 76-109 7-39 (319)
325 2p2s_A Putative oxidoreductase 60.1 12 0.0004 37.0 5.9 89 76-170 5-96 (336)
326 1y81_A Conserved hypothetical 59.8 11 0.00038 32.2 5.0 100 75-209 14-118 (138)
327 2bi7_A UDP-galactopyranose mut 59.7 6.2 0.00021 40.0 3.9 32 76-108 4-35 (384)
328 4aj2_A L-lactate dehydrogenase 59.6 21 0.00072 35.4 7.7 72 75-153 19-100 (331)
329 3lov_A Protoporphyrinogen oxid 59.6 5.6 0.00019 41.2 3.7 31 76-107 5-37 (475)
330 1nyt_A Shikimate 5-dehydrogena 59.4 7.8 0.00027 37.2 4.4 33 75-108 119-151 (271)
331 2iid_A L-amino-acid oxidase; f 59.4 5.7 0.00019 41.5 3.7 32 75-107 33-64 (498)
332 1nn5_A Similar to deoxythymidy 59.4 11 0.00037 34.1 5.2 31 180-210 8-40 (215)
333 3hdq_A UDP-galactopyranose mut 59.3 6.9 0.00024 40.1 4.2 31 76-107 30-60 (397)
334 4fn4_A Short chain dehydrogena 59.0 11 0.00036 36.1 5.2 52 69-123 3-58 (254)
335 3mz0_A Inositol 2-dehydrogenas 58.9 6.7 0.00023 39.0 3.9 87 76-169 3-95 (344)
336 3ihg_A RDME; flavoenzyme, anth 58.8 7.5 0.00026 41.1 4.6 32 76-108 6-37 (535)
337 1m3s_A Hypothetical protein YC 58.7 33 0.0011 30.3 8.3 32 74-105 36-69 (186)
338 3d1c_A Flavin-containing putat 58.7 7.3 0.00025 38.5 4.2 32 76-108 5-37 (369)
339 4hp8_A 2-deoxy-D-gluconate 3-d 58.7 34 0.0012 32.4 8.7 79 76-155 10-94 (247)
340 2cuk_A Glycerate dehydrogenase 58.7 8.7 0.0003 37.8 4.7 33 76-109 145-177 (311)
341 1trb_A Thioredoxin reductase; 58.6 6.2 0.00021 38.2 3.6 30 76-106 6-35 (320)
342 2gag_B Heterotetrameric sarcos 58.6 5.9 0.0002 39.8 3.5 32 76-108 22-55 (405)
343 4g2n_A D-isomer specific 2-hyd 58.5 7.3 0.00025 39.1 4.1 107 76-206 174-280 (345)
344 3c96_A Flavin-containing monoo 58.5 6.8 0.00023 39.8 4.0 32 76-108 5-37 (410)
345 2q0l_A TRXR, thioredoxin reduc 58.2 7.7 0.00026 37.3 4.2 30 77-107 3-33 (311)
346 1v0j_A UDP-galactopyranose mut 58.1 5.9 0.0002 40.3 3.4 32 76-108 8-40 (399)
347 2rgh_A Alpha-glycerophosphate 58.0 6.9 0.00023 42.1 4.1 31 76-107 33-63 (571)
348 3ab1_A Ferredoxin--NADP reduct 58.0 7.6 0.00026 38.4 4.2 32 76-108 15-46 (360)
349 1uf9_A TT1252 protein; P-loop, 57.9 5.9 0.0002 35.5 3.1 28 174-201 1-30 (203)
350 2q7v_A Thioredoxin reductase; 57.7 7.5 0.00025 37.8 4.0 31 76-107 9-39 (325)
351 1qp8_A Formate dehydrogenase; 57.7 7.9 0.00027 38.0 4.1 104 76-207 125-228 (303)
352 1k0i_A P-hydroxybenzoate hydro 57.5 5.5 0.00019 40.1 3.1 31 77-108 4-34 (394)
353 2duw_A Putative COA-binding pr 57.5 10 0.00035 32.7 4.4 38 70-108 8-49 (145)
354 2cul_A Glucose-inhibited divis 57.5 7 0.00024 36.3 3.6 30 77-107 5-34 (232)
355 2gv8_A Monooxygenase; FMO, FAD 57.4 7.8 0.00027 39.9 4.3 31 76-107 7-39 (447)
356 1pjc_A Protein (L-alanine dehy 57.3 8.1 0.00028 38.9 4.2 32 76-108 168-199 (361)
357 3oet_A Erythronate-4-phosphate 57.2 8.1 0.00028 39.3 4.2 109 76-207 120-228 (381)
358 2if2_A Dephospho-COA kinase; a 57.2 5.3 0.00018 36.1 2.6 22 181-203 1-24 (204)
359 2z2v_A Hypothetical protein PH 57.1 3.3 0.00011 41.9 1.3 38 69-108 10-47 (365)
360 4had_A Probable oxidoreductase 57.0 6 0.0002 39.3 3.2 89 76-170 24-116 (350)
361 2qa2_A CABE, polyketide oxygen 57.0 7.9 0.00027 40.8 4.3 33 75-108 12-44 (499)
362 2pbr_A DTMP kinase, thymidylat 57.0 13 0.00044 32.9 5.2 28 183-210 2-31 (195)
363 3e1t_A Halogenase; flavoprotei 57.0 7.6 0.00026 40.9 4.2 32 76-108 8-39 (512)
364 2vhw_A Alanine dehydrogenase; 56.6 8.4 0.00029 39.1 4.2 32 76-108 169-200 (377)
365 1o94_A Tmadh, trimethylamine d 56.6 7.9 0.00027 42.9 4.4 32 75-107 389-420 (729)
366 2gqw_A Ferredoxin reductase; f 56.5 25 0.00087 35.6 8.0 80 75-155 145-242 (408)
367 3e70_C DPA, signal recognition 56.5 12 0.00042 37.1 5.3 31 180-210 128-160 (328)
368 3g3e_A D-amino-acid oxidase; F 56.4 5.2 0.00018 39.6 2.6 30 77-107 2-37 (351)
369 1i8t_A UDP-galactopyranose mut 56.4 6.8 0.00023 39.4 3.5 31 77-108 3-33 (367)
370 3fg2_P Putative rubredoxin red 56.3 8 0.00027 39.3 4.1 32 76-108 2-35 (404)
371 4dsg_A UDP-galactopyranose mut 56.1 8.1 0.00028 40.5 4.2 32 76-108 10-42 (484)
372 2glx_A 1,5-anhydro-D-fructose 56.1 8.3 0.00028 37.9 4.1 67 77-148 2-70 (332)
373 2gqf_A Hypothetical protein HI 56.0 7.4 0.00025 39.7 3.8 32 77-109 6-37 (401)
374 3da1_A Glycerol-3-phosphate de 55.8 9.6 0.00033 40.8 4.8 36 71-107 14-49 (561)
375 2z3y_A Lysine-specific histone 55.7 8.8 0.0003 42.0 4.5 33 75-108 107-139 (662)
376 3c4a_A Probable tryptophan hyd 55.7 6.9 0.00024 39.3 3.4 31 77-108 2-34 (381)
377 3s2e_A Zinc-containing alcohol 55.6 16 0.00054 36.0 6.1 48 76-125 168-215 (340)
378 3goh_A Alcohol dehydrogenase, 55.6 9.8 0.00033 37.1 4.4 65 76-149 144-208 (315)
379 2og2_A Putative signal recogni 55.5 13 0.00044 37.5 5.3 30 181-210 157-188 (359)
380 2bry_A NEDD9 interacting prote 55.4 8.3 0.00028 40.6 4.1 33 75-108 92-124 (497)
381 1nvt_A Shikimate 5'-dehydrogen 55.2 11 0.00037 36.5 4.7 32 75-108 128-159 (287)
382 3tr0_A Guanylate kinase, GMP k 55.1 7.2 0.00025 35.1 3.2 24 180-203 6-31 (205)
383 3c4n_A Uncharacterized protein 55.1 7.1 0.00024 39.7 3.4 32 76-108 37-70 (405)
384 2o4c_A Erythronate-4-phosphate 55.1 9.2 0.00031 38.9 4.2 30 76-106 117-146 (380)
385 2eez_A Alanine dehydrogenase; 54.8 9.4 0.00032 38.5 4.2 32 76-108 167-198 (369)
386 1xhc_A NADH oxidase /nitrite r 54.8 19 0.00064 36.1 6.5 78 76-160 144-242 (367)
387 2qcu_A Aerobic glycerol-3-phos 54.7 8.3 0.00028 40.5 4.0 30 77-107 5-34 (501)
388 2c5m_A CTP synthase; cytidine 54.7 11 0.00038 36.0 4.3 33 179-211 21-57 (294)
389 3axb_A Putative oxidoreductase 54.7 5.5 0.00019 40.9 2.5 31 76-107 24-55 (448)
390 2a87_A TRXR, TR, thioredoxin r 54.6 8.4 0.00029 37.7 3.8 30 76-106 15-44 (335)
391 3atr_A Conserved archaeal prot 54.6 6.1 0.00021 40.8 2.9 31 77-108 8-38 (453)
392 3fpz_A Thiazole biosynthetic e 54.2 7.2 0.00025 38.3 3.2 30 77-107 67-98 (326)
393 2xag_A Lysine-specific histone 54.2 8.9 0.0003 43.4 4.3 32 75-107 278-309 (852)
394 1y0p_A Fumarate reductase flav 54.2 8.4 0.00029 41.2 4.0 31 77-108 128-158 (571)
395 2yhs_A FTSY, cell division pro 54.1 14 0.00048 38.9 5.5 30 181-210 293-324 (503)
396 1jeo_A MJ1247, hypothetical pr 54.0 33 0.0011 30.1 7.4 16 75-90 40-55 (180)
397 3o0h_A Glutathione reductase; 54.0 8.7 0.0003 40.1 4.0 31 76-107 27-57 (484)
398 3aez_A Pantothenate kinase; tr 54.0 9.1 0.00031 37.7 3.9 26 180-205 89-116 (312)
399 2yvu_A Probable adenylyl-sulfa 54.0 16 0.00056 32.2 5.4 32 180-211 12-45 (186)
400 1mld_A Malate dehydrogenase; o 54.0 81 0.0028 30.7 10.9 121 77-206 2-134 (314)
401 1rp0_A ARA6, thiazole biosynth 53.9 9.3 0.00032 36.7 3.9 31 76-107 40-71 (284)
402 1u8f_O GAPDH, glyceraldehyde-3 53.9 48 0.0017 32.8 9.3 43 76-118 4-48 (335)
403 4at0_A 3-ketosteroid-delta4-5a 53.8 9.2 0.00032 40.3 4.2 30 77-107 43-72 (510)
404 1fl2_A Alkyl hydroperoxide red 53.7 10 0.00034 36.5 4.2 29 77-106 3-31 (310)
405 2woj_A ATPase GET3; tail-ancho 53.7 10 0.00034 38.1 4.2 34 181-214 17-55 (354)
406 2qa1_A PGAE, polyketide oxygen 53.6 8.7 0.0003 40.4 3.9 32 76-108 12-43 (500)
407 3k5p_A D-3-phosphoglycerate de 53.6 9.9 0.00034 39.2 4.2 105 76-206 157-261 (416)
408 2wwf_A Thymidilate kinase, put 53.6 12 0.00041 33.7 4.5 31 180-210 9-41 (212)
409 2i0z_A NAD(FAD)-utilizing dehy 53.4 9.1 0.00031 39.5 4.0 31 77-108 28-58 (447)
410 4dna_A Probable glutathione re 53.4 9 0.00031 39.7 4.0 31 76-107 6-36 (463)
411 2aqj_A Tryptophan halogenase, 53.4 9.2 0.00031 40.5 4.1 32 76-108 6-40 (538)
412 1j8m_F SRP54, signal recogniti 53.2 14 0.00048 36.1 5.1 31 181-211 98-130 (297)
413 2egg_A AROE, shikimate 5-dehyd 53.2 12 0.00043 36.4 4.7 33 75-108 141-174 (297)
414 1p77_A Shikimate 5-dehydrogena 53.1 8.4 0.00029 37.1 3.4 33 75-108 119-151 (272)
415 3d64_A Adenosylhomocysteinase; 53.1 9.9 0.00034 40.1 4.2 63 76-148 278-340 (494)
416 1ldn_A L-lactate dehydrogenase 53.0 16 0.00054 36.0 5.5 34 75-109 6-41 (316)
417 1txg_A Glycerol-3-phosphate de 53.0 9.4 0.00032 37.4 3.8 44 77-121 2-46 (335)
418 4eez_A Alcohol dehydrogenase 1 52.8 19 0.00063 35.5 6.1 50 76-126 165-214 (348)
419 2zqz_A L-LDH, L-lactate dehydr 52.7 1.2E+02 0.0041 29.8 11.9 71 75-153 9-89 (326)
420 2x0j_A Malate dehydrogenase; o 52.7 18 0.00061 35.3 5.7 70 77-153 2-82 (294)
421 2r0c_A REBC; flavin adenine di 52.5 9.9 0.00034 40.5 4.2 31 77-108 28-58 (549)
422 2i99_A MU-crystallin homolog; 52.4 16 0.00054 35.9 5.4 35 74-108 134-169 (312)
423 2d59_A Hypothetical protein PH 52.2 14 0.0005 31.7 4.5 40 66-106 13-56 (144)
424 2xve_A Flavin-containing monoo 52.0 11 0.00036 39.3 4.2 32 76-108 3-40 (464)
425 2bka_A CC3, TAT-interacting pr 51.9 29 0.00099 31.8 7.0 72 76-151 19-95 (242)
426 1sq5_A Pantothenate kinase; P- 51.9 8.8 0.0003 37.6 3.4 26 179-204 78-105 (308)
427 3i3l_A Alkylhalidase CMLS; fla 51.9 11 0.00036 40.8 4.3 32 76-108 24-55 (591)
428 3uie_A Adenylyl-sulfate kinase 51.8 23 0.00079 31.8 6.1 31 179-209 23-55 (200)
429 3h8l_A NADH oxidase; membrane 51.8 8.1 0.00028 39.2 3.2 32 76-108 2-36 (409)
430 1zk7_A HGII, reductase, mercur 51.7 11 0.00039 38.9 4.4 32 76-108 5-36 (467)
431 2d8a_A PH0655, probable L-thre 51.3 18 0.00062 35.7 5.7 48 76-125 169-217 (348)
432 2p67_A LAO/AO transport system 51.3 15 0.00052 36.4 5.1 34 179-212 54-89 (341)
433 1jjv_A Dephospho-COA kinase; P 51.2 8.5 0.00029 34.8 2.9 20 181-200 2-23 (206)
434 3h28_A Sulfide-quinone reducta 51.1 11 0.00038 38.5 4.2 32 76-108 3-36 (430)
435 3kjh_A CO dehydrogenase/acetyl 51.1 5.4 0.00019 37.0 1.6 30 184-213 3-34 (254)
436 2d4a_B Malate dehydrogenase; a 51.1 35 0.0012 33.3 7.7 69 77-152 1-79 (308)
437 1v8b_A Adenosylhomocysteinase; 51.1 9.1 0.00031 40.2 3.5 63 76-148 258-320 (479)
438 3iwa_A FAD-dependent pyridine 51.0 8.6 0.0003 39.9 3.4 32 76-108 4-37 (472)
439 1sc6_A PGDH, D-3-phosphoglycer 50.9 12 0.00039 38.5 4.2 32 76-108 146-177 (404)
440 2hcy_A Alcohol dehydrogenase 1 50.8 21 0.00072 35.2 6.1 46 76-123 171-217 (347)
441 1rjw_A ADH-HT, alcohol dehydro 50.7 25 0.00085 34.6 6.6 47 76-124 166-212 (339)
442 3ake_A Cytidylate kinase; CMP 50.7 10 0.00035 34.1 3.4 22 182-203 3-26 (208)
443 3urh_A Dihydrolipoyl dehydroge 50.4 9.9 0.00034 39.7 3.7 32 76-108 26-57 (491)
444 4g81_D Putative hexonate dehyd 50.3 13 0.00043 35.6 4.1 48 76-124 10-61 (255)
445 1qo8_A Flavocytochrome C3 fuma 50.3 9.1 0.00031 40.9 3.5 32 76-108 122-153 (566)
446 1ye8_A Protein THEP1, hypothet 50.3 11 0.00037 33.7 3.5 22 183-204 2-25 (178)
447 1ez4_A Lactate dehydrogenase; 50.1 1.3E+02 0.0045 29.3 11.8 70 75-152 5-84 (318)
448 1ydw_A AX110P-like protein; st 50.1 23 0.00079 35.2 6.3 33 75-107 6-39 (362)
449 3tnl_A Shikimate dehydrogenase 50.1 13 0.00044 36.8 4.2 33 75-108 154-187 (315)
450 3b1j_A Glyceraldehyde 3-phosph 49.9 85 0.0029 31.1 10.3 91 77-169 4-122 (339)
451 2cdc_A Glucose dehydrogenase g 49.9 16 0.00056 36.4 5.1 48 76-124 182-231 (366)
452 2qae_A Lipoamide, dihydrolipoy 49.7 12 0.00042 38.7 4.3 32 76-108 3-34 (468)
453 1cke_A CK, MSSA, protein (cyti 49.7 11 0.00037 34.5 3.5 22 182-203 6-29 (227)
454 2xxa_A Signal recognition part 49.7 17 0.00058 37.6 5.3 33 181-213 100-135 (433)
455 1yqd_A Sinapyl alcohol dehydro 49.5 20 0.00067 35.9 5.6 48 76-125 189-237 (366)
456 4eun_A Thermoresistant glucoki 49.5 12 0.00042 33.7 3.8 24 180-203 28-53 (200)
457 3kb6_A D-lactate dehydrogenase 49.1 19 0.00064 35.9 5.3 104 76-205 142-246 (334)
458 2b5w_A Glucose dehydrogenase; 49.0 23 0.00077 35.2 6.0 49 76-124 174-226 (357)
459 2j6i_A Formate dehydrogenase; 49.0 11 0.00037 38.1 3.6 110 76-207 165-275 (364)
460 1zh8_A Oxidoreductase; TM0312, 48.7 10 0.00035 37.6 3.3 92 73-170 16-112 (340)
461 1rj9_A FTSY, signal recognitio 48.7 17 0.00057 35.6 4.8 30 181-210 102-133 (304)
462 2nac_A NAD-dependent formate d 48.6 11 0.00037 38.6 3.5 109 76-206 192-300 (393)
463 4fs3_A Enoyl-[acyl-carrier-pro 48.5 13 0.00043 35.3 3.8 37 70-109 3-42 (256)
464 3lnc_A Guanylate kinase, GMP k 48.4 8.6 0.00029 35.6 2.6 25 180-204 26-53 (231)
465 3jyo_A Quinate/shikimate dehyd 48.4 16 0.00056 35.4 4.6 33 75-108 127-160 (283)
466 3k96_A Glycerol-3-phosphate de 48.4 15 0.00052 36.8 4.5 44 75-120 29-72 (356)
467 2hqm_A GR, grase, glutathione 48.1 12 0.00042 38.9 4.0 32 76-108 12-43 (479)
468 3gvp_A Adenosylhomocysteinase 48.1 14 0.00047 38.2 4.2 45 76-122 221-265 (435)
469 3ef6_A Toluene 1,2-dioxygenase 48.0 29 0.00098 35.2 6.7 80 75-155 143-244 (410)
470 3o8q_A Shikimate 5-dehydrogena 48.0 16 0.00054 35.5 4.4 33 75-108 126-159 (281)
471 2ffh_A Protein (FFH); SRP54, s 47.8 17 0.00059 37.4 4.9 32 181-212 98-131 (425)
472 2wdq_A Succinate dehydrogenase 47.7 12 0.00042 40.2 4.0 31 77-108 9-39 (588)
473 2r9z_A Glutathione amide reduc 47.7 14 0.00049 38.2 4.4 32 76-108 5-36 (463)
474 2h88_A Succinate dehydrogenase 47.7 12 0.00042 40.6 4.0 31 77-108 20-50 (621)
475 3fbt_A Chorismate mutase and s 47.5 16 0.00055 35.5 4.4 33 75-108 122-155 (282)
476 3moi_A Probable dehydrogenase; 47.3 9.1 0.00031 38.8 2.7 88 76-170 3-94 (387)
477 1h6d_A Precursor form of gluco 47.2 18 0.00062 37.2 5.1 71 74-148 82-158 (433)
478 2e4g_A Tryptophan halogenase; 47.2 14 0.00048 39.3 4.3 33 75-108 25-60 (550)
479 3lv8_A DTMP kinase, thymidylat 47.2 22 0.00074 33.5 5.2 30 180-209 26-57 (236)
480 3g5s_A Methylenetetrahydrofola 47.2 16 0.00053 37.7 4.3 31 77-108 3-33 (443)
481 1mo9_A ORF3; nucleotide bindin 47.1 13 0.00043 39.4 3.9 33 76-109 44-76 (523)
482 3nlc_A Uncharacterized protein 47.1 9.4 0.00032 40.9 2.9 33 76-109 108-140 (549)
483 3a00_A Guanylate kinase, GMP k 47.0 8 0.00027 34.5 2.0 23 182-204 2-26 (186)
484 3n58_A Adenosylhomocysteinase; 47.0 15 0.0005 38.2 4.2 32 76-108 248-279 (464)
485 3uko_A Alcohol dehydrogenase c 47.0 20 0.00069 35.9 5.3 49 76-126 195-244 (378)
486 2bs2_A Quinol-fumarate reducta 46.9 13 0.00043 40.8 3.9 30 78-108 8-37 (660)
487 3fmw_A Oxygenase; mithramycin, 46.7 13 0.00044 39.9 3.9 31 77-108 51-81 (570)
488 3ip1_A Alcohol dehydrogenase, 46.7 25 0.00084 35.7 5.9 49 76-126 215-264 (404)
489 3ef6_A Toluene 1,2-dioxygenase 46.5 14 0.00048 37.5 4.1 31 76-107 3-35 (410)
490 1uj2_A Uridine-cytidine kinase 46.4 11 0.00038 35.5 3.0 25 180-204 21-47 (252)
491 1e3j_A NADP(H)-dependent ketos 46.4 24 0.0008 35.0 5.6 48 76-125 170-217 (352)
492 1v59_A Dihydrolipoamide dehydr 46.4 14 0.00047 38.4 4.0 31 76-107 6-36 (478)
493 3l8k_A Dihydrolipoyl dehydroge 46.3 14 0.0005 38.2 4.2 30 77-107 6-35 (466)
494 1ges_A Glutathione reductase; 46.2 14 0.00047 38.2 4.0 32 76-108 5-36 (450)
495 3e82_A Putative oxidoreductase 45.9 18 0.00063 36.1 4.7 88 73-170 5-97 (364)
496 3t4e_A Quinate/shikimate dehyd 45.7 18 0.00061 35.7 4.5 33 75-108 148-181 (312)
497 1uuf_A YAHK, zinc-type alcohol 45.7 23 0.0008 35.4 5.5 49 76-126 196-244 (369)
498 3h2s_A Putative NADH-flavin re 45.6 20 0.0007 32.3 4.7 48 77-126 2-50 (224)
499 3dgh_A TRXR-1, thioredoxin red 45.6 15 0.00051 38.2 4.2 30 76-106 10-39 (483)
500 3dk9_A Grase, GR, glutathione 45.5 13 0.00043 38.7 3.6 31 77-108 22-52 (478)
No 1
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=100.00 E-value=1.4e-69 Score=586.14 Aligned_cols=404 Identities=36% Similarity=0.535 Sum_probs=348.8
Q ss_pred cCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 72 ~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
..+.++|+|||+|+||||++|++|+.+|++|.|+|.+..+..+.+.+.|+.+..+++++.+. .+|+||+|||||
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~------~~d~vV~Spgi~ 92 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVL------DASVVVVSTAIS 92 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGT------TCSEEEECTTSC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcC------CCCEEEECCCCC
Confidence 33446799999999999999999999999999999887777888999999999998776654 589999999999
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCccccCCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGG 231 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~~~~~~~ 231 (538)
+++|++++|++.|+||+++.+++.+..+..++|+||||||||||++|++++|+.+|++++..+|+....++. +...+..
T Consensus 93 ~~~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~~~gg~~~~~g~-~~~~~~~ 171 (494)
T 4hv4_A 93 ADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTFVNGGLVKAAGT-HARLGSS 171 (494)
T ss_dssp TTCHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCCCEEEEEEEETTTTE-EEECCSS
T ss_pred CCCHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccccccc-ccccCCC
Confidence 999999999999999999999999887767899999999999999999999999998765556655444432 3334567
Q ss_pred cEEEEeecCcceeeccccCcEEEEcCCCccccccC-CCHHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcC
Q 009279 232 KNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310 (538)
Q Consensus 232 ~~~VlE~~~~d~~~~~~~p~vaVITNI~~DHld~~-gs~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~ 310 (538)
+++|+|+++.+..+..++|+++|||||++||+||| +|+|+|+++|.++++.+++++.+|+|.||+....+.+..
T Consensus 172 d~~VlE~~e~~~s~~~~~P~iaVITNI~~DHld~~G~t~e~~a~aK~~i~~~~~~~g~~V~n~dd~~~~~~~~~~----- 246 (494)
T 4hv4_A 172 RYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPRV----- 246 (494)
T ss_dssp SEEEEECCCGGGGGGGCCCSEEEECCCCCSSCCSSTTHHHHHHHHHHHHHTTSCTTCEEEEETTSHHHHHHGGGC-----
T ss_pred cEEEEEccccccccccccCCEEEEcCCCHHHhhhhccCHHHHHHHHHHHHhcCCCCCEEEEECCCHHHHHHHHhc-----
Confidence 89999999888766778999999999999999999 799999999999999888889999999999877654321
Q ss_pred ccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHH
Q 009279 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIA 390 (538)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia 390 (538)
..++++||....+|+++.++... .++..|.+...+.....+.++++|.||++|+++|++
T Consensus 247 --------------------~~~~~~~g~~~~~d~~~~~~~~~-~~~~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia 305 (494)
T 4hv4_A 247 --------------------GRHITTYGFSDDADVQIASYRQE-GPQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVA 305 (494)
T ss_dssp --------------------CSCEEEEESSTTCSEEEEEEEEE-TTEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHH
T ss_pred --------------------CCCEEEEecCCCCceEEEEEEEe-CCEEEEEEEECCceEEEEEecCCcHHHHHHHHHHHH
Confidence 14678999877788888877654 245667776555433568999999999999999999
Q ss_pred HHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeee---------CCeEEEEECCCCHHHHHHHHHHHHhhCCCCeE
Q 009279 391 TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI---------YGCHIYDDFAHHPTEVRAVLQAARQRFPNKAL 461 (538)
Q Consensus 391 ~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~---------~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~ 461 (538)
++..+|++ .+.|+++|++|+++|||||++... +++.+|+||||||++++++++++++.++++|+
T Consensus 306 ~a~~lgi~-------~~~i~~~L~~f~g~~~R~e~v~~~~~~~~~~~~~g~~vi~DyaHnp~~i~a~l~al~~~~~~~ri 378 (494)
T 4hv4_A 306 VATEEGIE-------DEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDDYGHHPTEVDATIKAARAGWPDKRI 378 (494)
T ss_dssp HHHHHTCC-------HHHHHHHHHHCCCBTTSSEEEEEEESHHHHSCSSEEEEEEECCCSHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHcCCC-------HHHHHHHHHhCCCCCCccEEeeeccccccccCCCCeEEEEeCCCCHHHHHHHHHHHHhhcCCCeE
Confidence 99999997 899999999999999999999764 48999999999999999999999987777799
Q ss_pred EEEEccCCCCchHHHHHHHHHHhccCCEEEEeccCCCCc-ccccCcHHHHHHHHh
Q 009279 462 IAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWL-IIFAVSSFWLIMAIN 515 (538)
Q Consensus 462 i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~-~~~~~~~~~~~~~~~ 515 (538)
++|||+++|++++++..+++++++.+|.||+++.|++++ |+.+.+.++|.+.+.
T Consensus 379 i~V~g~~~~~r~k~~~~~~~~~~~~aD~vilt~~~~~~e~p~~g~~~~~l~~~~~ 433 (494)
T 4hv4_A 379 VMLFQPHRYTRTRDLYDDFANVLSQVDVLLMLDVYAAGEPPIPGADSRALCRTIR 433 (494)
T ss_dssp EEEECCBCHHHHHHTHHHHHHHHTTSSEEEEECCBCTTCCCCTTCSHHHHHHHHH
T ss_pred EEEEcCCCCCchHHHHHHHHHHHhcCCEEEEeCCcCCccCCcCCccHHHHHHHHH
Confidence 999999988898888889999889999999999998885 668899998887664
No 2
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=100.00 E-value=6.5e-66 Score=555.64 Aligned_cols=401 Identities=34% Similarity=0.524 Sum_probs=339.6
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
.++|+|+|+|+|||+++|++|+.+|++|.|+|.+..+..+.+.+.|+.+..++....+. .+|+||+||++|+++
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~------~a~~vv~s~~i~~~~ 91 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIE------GASVVVVSSAIKDDN 91 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGT------TCSEEEECTTSCTTC
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCHHHcC------CCCEEEECCCCCCCC
Confidence 35799999999999999999999999999999887766778888999999887765443 589999999999999
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCccccCCCcEE
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF 234 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~~~~~~~~~~ 234 (538)
|++++|++.++|++++.+++.......++|+||||||||||++||++||+++|++++..+|+....++. +......+++
T Consensus 92 ~~~~~a~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~p~~~igg~~~~~~~-~~~~~~~d~~ 170 (475)
T 1p3d_A 92 PELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGK-NAHLGASRYL 170 (475)
T ss_dssp HHHHHHHHTTCCEEEHHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEEEEEETTTTE-EEECCSSSEE
T ss_pred HHHHHHHHcCCcEEEHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCCCEEEECCccccccc-ccccCCCCEE
Confidence 999999999999999999998887767999999999999999999999999999855444443333221 2333457899
Q ss_pred EEeecCcceeeccccCcEEEEcCCCccccccC-CCHHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccc
Q 009279 235 VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313 (538)
Q Consensus 235 VlE~~~~d~~~~~~~p~vaVITNI~~DHld~~-gs~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~ 313 (538)
|+|++++|..+..++|+++|||||++||+||| +|+|+|+++|.+++..+++++.+|+|.|||....+.....
T Consensus 171 VlE~~~~~~~~~~~~p~vaviTNI~~DHld~~G~t~e~ia~aK~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~------- 243 (475)
T 1p3d_A 171 IAEADESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVG------- 243 (475)
T ss_dssp EEECCCTTSGGGGCCCSEEEECCCCCCSGGGGTTCHHHHHHHHHHHHTTSCTTCEEEEETTCHHHHHHHHHHC-------
T ss_pred EEEecCCcCccccccCCEEEEcCCChhhhhhhcCCHHHHHHHHHHHHhhCCCCCEEEEECCCHHHHHHHHhcC-------
Confidence 99999988876678999999999999999999 8999999999999999988999999999998777665431
Q ss_pred cCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHH
Q 009279 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVL 393 (538)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~ 393 (538)
.++++|+....+|+++.++.... ++..|.+...+.....+.++++|.||++|+++|++++.
T Consensus 244 ------------------~~~~~~g~~~~~d~~~~~~~~~~-~~~~f~~~~~~~~~~~~~l~l~G~hn~~NalaAia~~~ 304 (475)
T 1p3d_A 244 ------------------RQVITYGFSEQADYRIEDYEQTG-FQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAK 304 (475)
T ss_dssp ------------------SEEEEEESSTTCSEEEEEEEEET-TEEEEEEECTTCCEEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred ------------------CCEEEEecCCCCcEEEEEEEEcC-CceEEEEEECCCeEEEEEEcCccHHHHHHHHHHHHHHH
Confidence 46789997666788877665432 35567665433222368899999999999999999999
Q ss_pred HhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeC----CeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCC
Q 009279 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIY----GCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHT 469 (538)
Q Consensus 394 ~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~----g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~ 469 (538)
.+|++ .+.|+++|++|+++|||||++...+ ++++|+||||||++++++++++++.++++|+++|||+++
T Consensus 305 ~lgi~-------~~~i~~~L~~f~~~~gR~e~v~~~~~~~~~~~vi~DyaHnp~~~~a~l~al~~~~~~~~i~~v~g~~~ 377 (475)
T 1p3d_A 305 EEGIA-------NEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHR 377 (475)
T ss_dssp HTTCC-------HHHHHHHHHTCCCBTTSSEEEEEEEETTEEEEEEEECCCSHHHHHHHHHHHHHHHCSSCEEEEECCBC
T ss_pred HcCCC-------HHHHHHHHHhCCCCCCCCEEEecccccCCCcEEEEeCCCCHHHHHHHHHHHHhhcCCCeEEEEECCCC
Confidence 99997 8999999999999999999997543 799999999999999999999997655678999999887
Q ss_pred CCchHHHHHHHHHHhccCCEEEEeccCCCCc-ccccCcHHHHHHHHh
Q 009279 470 YSRLVVLKDDFANALSEADQVVVSAVLVFWL-IIFAVSSFWLIMAIN 515 (538)
Q Consensus 470 ~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~-~~~~~~~~~~~~~~~ 515 (538)
++|++++..++.+++..+|.+|+|++++.++ |..+.+.+.+.+.+.
T Consensus 378 ~~r~~~~~~~~~~~~~~~d~vi~t~~~~~~e~~~~g~~~~~l~~~~~ 424 (475)
T 1p3d_A 378 YSRTRDLFDDFVQVLSQVDALIMLDVYAAGEAPIVGADSKSLCRSIR 424 (475)
T ss_dssp HHHHHHTHHHHHHHHTTSSEEEEECCBCTTCCCCTTCSHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCEEEEcCCcCCCCCCCCCCCHHHHHHHHH
Confidence 7888888888988888899999999988885 667888888887654
No 3
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.1e-65 Score=559.15 Aligned_cols=383 Identities=29% Similarity=0.473 Sum_probs=314.9
Q ss_pred CCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC-hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 74 RKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS-SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~-~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
+.++|||||+|++|||++|++|+.+|++|.|+|.+.. +..+.|.+.|+.+..|+.+..+. ..+|+||+|||||+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~-----~~~d~vV~Spgi~~ 92 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQ-----PAPDLVVVGNAMKR 92 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGC-----SCCSEEEECTTCCT
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcC-----CCCCEEEECCCcCC
Confidence 3467999999999999999999999999999998754 45567888999999997776553 15899999999999
Q ss_pred CCHHHHHHHHCCCCeeeHHHHHHHH-hcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCC----------CCC
Q 009279 153 DNVEILHAKSVGVPIYKRDYWLAKL-TEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV----------PQF 221 (538)
Q Consensus 153 ~~~~l~~a~~~gi~vi~~~~~l~~~-~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~----------~~~ 221 (538)
++|++++|++.|+||+++.+++.+. .+..++|+|||||||||||+|+++||+++|++++..+|+.. ..+
T Consensus 93 ~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~~~~iGg~~~~~~T~~nln~~i 172 (524)
T 3hn7_A 93 GMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDAGFLIGGVPLVNTTDTNLQQVF 172 (524)
T ss_dssp TSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCCEEECSCCBCCCSSCHHHHHHT
T ss_pred CCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCceEEECCEeccccCchhhhhhh
Confidence 9999999999999999999998873 55678999999999999999999999999998876666432 112
Q ss_pred CCCccccC----------CCcEEEEeecCcceee-------ccccCcEEEEcCCCccccccCCCHHHHHHHHHHHhhccc
Q 009279 222 PDGSIFYG----------GGKNFVLEADEYDGCF-------LGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIR 284 (538)
Q Consensus 222 ~~~~~~~~----------~~~~~VlE~~~~d~~~-------~~~~p~vaVITNI~~DHld~~gs~e~~~~~k~~~~~~~~ 284 (538)
+. +...+ +.+++|+|.+++|... ..++|+++|||||++||+|||||+|+|+++|.+++..++
T Consensus 173 g~-~~~~~~~~~~~~~~~~~~~~V~E~ss~~~~~~~~~~~~~~~~P~iaViTNI~~DHLd~~gs~e~y~~aK~~i~~~~~ 251 (524)
T 3hn7_A 173 AH-SSYLGTEKDDSDNSVNTGYFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFADLDAIQTQFHHMVRMIP 251 (524)
T ss_dssp TS-SEECCCCCCSSCTTCCCCEEEEECCSCCCBTTBCCCHHHHCCCSEEEECCCCCC------CHHHHHHHHHHHHTTSC
T ss_pred hh-HHhhCCCcccccccccCcEEEEECCCCCccccccccceeeecCCEEEEcCCChHHccccCCHHHHHHHHHHHHHhCC
Confidence 11 11111 1369999999988642 347999999999999999999999999999999999888
Q ss_pred CCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeecc--------------------CCCc
Q 009279 285 VGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFS--------------------SFND 344 (538)
Q Consensus 285 ~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--------------------~~~d 344 (538)
+++.+|+|.|||....+..... ..++++||.. ..+|
T Consensus 252 ~~g~~VlN~DD~~~~~~~~~~~------------------------~~~v~~fg~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (524)
T 3hn7_A 252 STGKIIMPAATISLEDTLAKGV------------------------WTPIWRTSVIDSTISSVRREDSPLENSQAENSSD 307 (524)
T ss_dssp TTSEEEEESSCHHHHHHHHTCC------------------------CSCEEEEEEEC-------------------CCCS
T ss_pred CCCEEEEECCCHHHHHHHHhcc------------------------CCcEEEEecCcccccccccccccccccccCCCCc
Confidence 8999999999998876654311 1356777764 2567
Q ss_pred ceEeeeeecCCCCeEEEEEECCee--eeEEEeCCCchhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCCCc
Q 009279 345 WYAESVCPNVQGGSDYILCERGRP--LAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRR 422 (538)
Q Consensus 345 ~~~~~i~~~~~~g~~f~~~~~~~~--~~~~~l~l~G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR 422 (538)
|++.++. .++..|.+..++.. ...+.++++|.||++|+++|++++..+|++ .+.|+++|++|+++|||
T Consensus 308 ~~~~~i~---~~g~~f~l~~~~~~~~~~~~~l~l~G~hn~~NalaA~a~~~~lgi~-------~~~i~~~L~~~~~~~gR 377 (524)
T 3hn7_A 308 WQAELIS---ADGSQFTVSFNDNKEATALVNWSMSGLHNVNNALVAIAAAYNIGVS-------VKTACAALSAFAGIKRR 377 (524)
T ss_dssp EEEEEEE---TTTTEEEEEETTEEEEEEEEECSCCSHHHHHHHHHHHHHHHHTTCC-------HHHHHHHHHTCCCBTTS
T ss_pred EEEEEEE---CCceEEEEEECCccceeEEEEeCCCcHHHHHhHHHHHHHHHHcCCC-------HHHHHHHHHhCCCCCce
Confidence 8777664 24678888776654 357899999999999999999999999997 79999999999999999
Q ss_pred eEEEeeeCCeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCC-chHHHHHHHHHHhccCCEEEEeccC
Q 009279 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYS-RLVVLKDDFANALSEADQVVVSAVL 496 (538)
Q Consensus 423 ~E~v~~~~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~-r~~~~~~~~~~~~~~~D~vi~~~~~ 496 (538)
||++...+++++|+||||||++++++++++++.++++|+++|||+++++ +++++...+..+++.+|.+|+++..
T Consensus 378 ~e~~~~~~g~~vi~D~ahnp~~~~a~l~~l~~~~~~~r~i~V~g~~~~~~~~g~~~~~~~~~~~~aD~vil~~~~ 452 (524)
T 3hn7_A 378 MELIGDVNDILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPRSNTMKMGIHQDSLAQSATLADHTLWYEPT 452 (524)
T ss_dssp SEEEEEETTEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEEECCCCSSCCSCCTTHHHHHTTTSSEEEEECCT
T ss_pred EEEEEecCCcEEEEECCCCHHHHHHHHHHHHhhcCCCCEEEEECCCCcchhhhhhHHHHHHHHhcCCEEEEcCCC
Confidence 9999877899999999999999999999999876667899999998765 6777777888888899999999854
No 4
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-65 Score=555.60 Aligned_cols=400 Identities=35% Similarity=0.535 Sum_probs=336.3
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
.++|+|+|+|+|||+++|++|+.+|++|.|+|.+..+..+.+.+.|+.+..++....+. .+|+||+||++|+++
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~------~a~~vv~s~~i~~~~ 92 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVR------DASVVVVSSAISADN 92 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGT------TCSEEEECTTCCTTC
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCHHHcC------CCCEEEECCCCCCCC
Confidence 35799999999999999999999999999999887766777888999998887665442 589999999999999
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCccccCCCcEE
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNF 234 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~~~~~~~~~~ 234 (538)
|++++|++.++|++++.+++.......++|+||||||||||++||++||+++|++++..+|+....++. +......+++
T Consensus 93 p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~p~~~igg~~~~~~~-~~~~~~~d~~ 171 (491)
T 2f00_A 93 PEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGV-HARLGHGRYL 171 (491)
T ss_dssp HHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEEEEEETTTTE-EEECCSSSEE
T ss_pred HHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhCCCCCEEEECCeeccccc-cccCCCCCEE
Confidence 999999999999999999999887777999999999999999999999999999855444443333221 2333467899
Q ss_pred EEeecCcceeeccccCcEEEEcCCCccccccC-CCHHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccc
Q 009279 235 VLEADEYDGCFLGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKY 313 (538)
Q Consensus 235 VlE~~~~d~~~~~~~p~vaVITNI~~DHld~~-gs~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~ 313 (538)
|+|+++.|..+..++|+++|||||++||+||| +|+|+|+++|.+++..+++++.+|+|.||+....+....
T Consensus 172 VlE~~~~~~~~~~~~p~vaviTNI~~DHld~~G~t~e~ia~aK~~i~~~~~~~~~~V~n~dd~~~~~~~~~~-------- 243 (491)
T 2f00_A 172 IAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRV-------- 243 (491)
T ss_dssp EEECCCTTSGGGGCCCSEEEECCCCSCSGGGTTTCHHHHHHHHHHHHTTSCTTCEEEEETTSHHHHHHGGGC--------
T ss_pred EEEeCCCccchhcCCCCEEEEcCCChhhhhhhcCCHHHHHHHHHHHHHhCCCCCEEEEECCCHHHHHHHHhc--------
Confidence 99999888876678999999999999999999 899999999999999988899999999999876654321
Q ss_pred cCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHH
Q 009279 314 SGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVL 393 (538)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~ 393 (538)
..++++|+....+|+++.++.... ++..|.+...+.....+.++++|.||++|+++|++++.
T Consensus 244 -----------------~~~~~~~g~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~G~hn~~NalaAia~a~ 305 (491)
T 2f00_A 244 -----------------GRQTTTYGFSEDADVRVEDYQQIG-PQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVAT 305 (491)
T ss_dssp -----------------CSEEEEEESSTTCSEEEEEEEEET-TEEEEEEECTTSCCEEEEESSCSHHHHHHHHHHHHHHH
T ss_pred -----------------CCcEEEEeCCCCCCEEEEEEEEcC-CceEEEEEECCceEEEEEEccchHHHHHHHHHHHHHHH
Confidence 146889997666788877665432 35567665433222368899999999999999999999
Q ss_pred HhcCCccCCcccHHHHHHHhccCCCCCCceEEEeee--------CC-eEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEE
Q 009279 394 TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTI--------YG-CHIYDDFAHHPTEVRAVLQAARQRFPNKALIAV 464 (538)
Q Consensus 394 ~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~--------~g-~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V 464 (538)
.+|++ .+.|+++|++|+++|||||++... ++ +++|+||||||++++++++++++.++++|+++|
T Consensus 306 ~lgi~-------~~~i~~~L~~f~~~~gR~e~v~~~~~~~~~~~~g~~~vi~DyaHnp~~~~a~l~al~~~~~~~~i~~v 378 (491)
T 2f00_A 306 EEGID-------DEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVML 378 (491)
T ss_dssp HHTCC-------HHHHHHHHHTCCCBTTSSEEEEEEESSSSSSCSSEEEEEEECCCSHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred HcCCC-------HHHHHHHHHhCCCCCCCCEEEccccccccccCCCcEEEEEeCCCCHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99997 899999999999999999999753 27 999999999999999999999986666789999
Q ss_pred EccCCCCchHHHHHHHHHHhccCCEEEEeccCCCCc-ccccCcHHHHHHHH
Q 009279 465 FQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWL-IIFAVSSFWLIMAI 514 (538)
Q Consensus 465 ~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~-~~~~~~~~~~~~~~ 514 (538)
||+++++|++++..++.+++..+|.||+|++++.++ |..+.+.+.+.+.+
T Consensus 379 ~g~~~~~r~k~~~~~~~~~~~~~d~vilt~~~~~~e~~~~g~~~~~l~~~~ 429 (491)
T 2f00_A 379 FQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTI 429 (491)
T ss_dssp ECCBCHHHHTTTHHHHHHHHTTSSEEEECCCBCSSSCCCTTSSHHHHTTC-
T ss_pred ECCCCCcchHHHHHHHHHHHHhCCEEEEcCCcCCCCCCCCCCCHHHHHHHH
Confidence 998877787777788988888899999999988874 66788888776544
No 5
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=100.00 E-value=7.7e-64 Score=538.10 Aligned_cols=388 Identities=31% Similarity=0.462 Sum_probs=317.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.++|++|+||.||+++|++|+.+|++|.|+|.+..+..+.+.+.|+.+..++....+. .+|+||+|||||+++|
T Consensus 13 ~~~h~i~I~G~G~sglA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~~~~g~~~~~~~------~~d~vV~spgi~~~~p 86 (469)
T 1j6u_A 13 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWY------DPDLVIKTPAVRDDNP 86 (469)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCC------CCSEEEECTTCCTTCH
T ss_pred ccEEEEEEcccCHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEECCCCHHHCC------CCCEEEECCCcCCCCH
Confidence 4689999999999999999999999999999887776778888999998886665543 5899999999999999
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhc--CCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCC-CCccccCCCc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTE--KYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFP-DGSIFYGGGK 232 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~--~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~-~~~~~~~~~~ 232 (538)
++++|++.|+|++++.+++++..+ +.++|+||||||||||++||+++|+++|++++.++|+++..++ . +...++.+
T Consensus 87 ~~~~a~~~gi~v~~~~e~l~~~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~~~~~~~g~~~~~g~~-~~~~~~~~ 165 (469)
T 1j6u_A 87 EIVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHG-NYEKGNGP 165 (469)
T ss_dssp HHHHHHHTTCCEEEHHHHHHHHHHHHCCCEEEEECSSSHHHHHHHHHHHHHHTTCCCEEECSSCCTTSTTS-SEECCSSC
T ss_pred HHHHHHHcCCcEEEHHHHHHHHHhccCCCEEEEECCCCHHHHHHHHHHHHHHcCCCceEEECCeecccCcc-ccccCCCC
Confidence 999999999999999999998876 6899999999999999999999999999998888888766554 3 23234456
Q ss_pred EEEEeecCcceeeccccCcEEEEcCCCccccccCCC-HHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCc
Q 009279 233 NFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFED-EDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311 (538)
Q Consensus 233 ~~VlE~~~~d~~~~~~~p~vaVITNI~~DHld~~gs-~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~ 311 (538)
+|+|.+++|.....++|+++|||||++||+||||| +|+|+++|.++++.++ .+|+|.||+....
T Consensus 166 -~V~E~~~~~~~~~~~~p~vaviTNI~~DHld~~g~t~e~ia~ak~~~~~~~~---~~V~n~dd~~~~~----------- 230 (469)
T 1j6u_A 166 -VVYELDESEEFFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTD---LVVTFAEDELTSH----------- 230 (469)
T ss_dssp -EEEEECTTSGGGGGCCCSEEEECCCCCCCGGGGTTCHHHHHHHHHHHHHTCS---EEEEETTCTTTGG-----------
T ss_pred -EEEECCCccCccccccCCEEEEcCCCcchhhhhcCHHHHHHHHHHHHHhhCC---EEEEECCChhhcc-----------
Confidence 99999999877667899999999999999999998 9999999998887654 8899999875321
Q ss_pred cccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCC-eEEEEEECCeeeeEEEeCCCchhHHHHHHHHHH
Q 009279 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGG-SDYILCERGRPLAQISLQIPGVHNVLNSLAVIA 390 (538)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g-~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia 390 (538)
.++++|+... +|+.+ ++... .++ ..|.+...+.....+.++++|.||++|+++|++
T Consensus 231 --------------------~~~~~~g~~~-~d~~~-~~~~~-~~~~~~f~~~~~~~~~~~~~l~l~G~hn~~NalaAia 287 (469)
T 1j6u_A 231 --------------------LGDVTFGVKK-GTYTL-EMRSA-SRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIA 287 (469)
T ss_dssp --------------------GCSEEECSSS-SSEEE-EEEEE-CSSCEEEEEEETTEEEEEEEESSCSHHHHHHHHHHHH
T ss_pred --------------------ceEEEEECCC-ceEEE-EEEEC-CCCCEEEEEEECCeEEEEEEecCcCHHHHHHHHHHHH
Confidence 1346777654 56766 55443 234 677776555443468899999999999999999
Q ss_pred HHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEE--eeeCCeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccC
Q 009279 391 TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLI--GTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPH 468 (538)
Q Consensus 391 ~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v--~~~~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~ 468 (538)
++..+|++ .+.|+++|++|+++|||||++ ...+++.+|+||||||++++++++++++.++++|+++|||++
T Consensus 288 ~a~~lgi~-------~~~i~~~L~~f~g~~gR~e~v~~~~~~g~~vi~D~aHnp~~~~a~l~al~~~~~~~~i~~I~g~g 360 (469)
T 1j6u_A 288 LFDSLGYD-------LAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPH 360 (469)
T ss_dssp HHHHTTCC-------HHHHHHHHHHCCCCTTSSEEEEEETTTTEEEEEECCCSHHHHHHHHHHHHHHCSSSEEEEEECCB
T ss_pred HHHHcCCC-------HHHHHHHHHhCCCCCCCcEEEcccccCCcEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99999997 899999999999999999999 545789999999999999999999999656667899999988
Q ss_pred CCCchHHHHHHHHHHhccCCEEEEeccCCCCc-ccccCcHHHHHHHHh
Q 009279 469 TYSRLVVLKDDFANALSEADQVVVSAVLVFWL-IIFAVSSFWLIMAIN 515 (538)
Q Consensus 469 ~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~-~~~~~~~~~~~~~~~ 515 (538)
+++|++++...++++++.+|.||+++++++|+ |.++.+.+.+.+.+.
T Consensus 361 ~~~r~~~~~~~l~~~~~~~d~vil~~~~~~~e~p~~g~~~~~l~~~~~ 408 (469)
T 1j6u_A 361 RYSRLEREDGNFAKALQLADEVVVTEVYDAFEEKKNGISGKMIWDSLK 408 (469)
T ss_dssp C--------CHHHHHHTTSSEEEECCCBC---------CHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHhcCCEEEEcccCCCCCCcccCcCHHHHHHHHH
Confidence 77888887788888888899999999988884 778899998887664
No 6
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=100.00 E-value=4.7e-59 Score=498.86 Aligned_cols=363 Identities=22% Similarity=0.259 Sum_probs=288.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC---ChhHHHHHHCCCeEEeCCCCCCcCCCCCCCC-CCEEEEcCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW---SSYMEGLLEAGANLHIGHSVSNIQGNDGSRF-PNAVVASSAIP 151 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~---~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~-~d~vvvsp~i~ 151 (538)
++|+|+|+|+|||++ |++|+.+|++|.|+|.+. .+..+.+.+.|+.+..++.+.... .. +|+||+|||||
T Consensus 10 k~v~viG~G~sG~s~-A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~-----~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 10 KKVLVLGLARSGEAA-ARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELL-----DEDFCYMIKNPGIP 83 (451)
T ss_dssp CEEEEECCTTTHHHH-HHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGG-----GSCEEEEEECTTSC
T ss_pred CEEEEEeeCHHHHHH-HHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhh-----cCCCCEEEECCcCC
Confidence 679999999999997 999999999999999864 356678888999999997765432 13 79999999999
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCccccCCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGG 231 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~~~~~~~ 231 (538)
+++|++++|++.|+||+++.+++++..+ .++|+||||||||||++||+++|+.+|.++ ...|+....+.......+..
T Consensus 84 ~~~p~~~~a~~~gi~v~~~~e~~~~~~~-~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~-~~~Gnig~~~~~~~~~~~~~ 161 (451)
T 3lk7_A 84 YNNPMVKKALEKQIPVLTEVELAYLVSE-SQLIGITGSNGKTTTTTMIAEVLNAGGQRG-LLAGNIGFPASEVVQAANDK 161 (451)
T ss_dssp TTSHHHHHHHHTTCCEECHHHHHHHHCC-SEEEEEECSSCHHHHHHHHHHHHHHTTCCE-EEEETSSSCHHHHTTTCCTT
T ss_pred CCChhHHHHHHCCCcEEeHHHHHHHhcC-CCEEEEECCCCHHHHHHHHHHHHHhcCCCE-EEeeecChhhhhhhhcCCCC
Confidence 9999999999999999999999998764 599999999999999999999999999875 44454221110001112457
Q ss_pred cEEEEeecCcceeec-cccCcEEEEcCCCccccccCCCHHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcC
Q 009279 232 KNFVLEADEYDGCFL-GLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTG 310 (538)
Q Consensus 232 ~~~VlE~~~~d~~~~-~~~p~vaVITNI~~DHld~~gs~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~ 310 (538)
+++|+|+++++.... .++|+++|||||++||+|||||+|+|+++|.++++..++++.+|+|.|||....+.+..
T Consensus 162 d~~VlE~~s~~l~~~~~~~p~iaviTNI~~DHld~~gt~e~i~~aK~~i~~~~~~~~~~V~n~dd~~~~~~~~~~----- 236 (451)
T 3lk7_A 162 DTLVMELSSFQLMGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTT----- 236 (451)
T ss_dssp CEEEEECCHHHHTTCSSCCCSEEEECCCCSCCHHHHSSHHHHHHHHHGGGTTCCTTSEEEEETTSHHHHHHHTTC-----
T ss_pred CEEEEECCccccccccccCCCEEEEcCCChhHhhhcCCHHHHHHHHHHHHhcCCCCCEEEEECCcHHHHHHHhhc-----
Confidence 899999987764322 57999999999999999999999999999999999888899999999999876654321
Q ss_pred ccccCCcccccCcccccCCCCceEEEeeccCCC-cceEeeeeecCCCCeEEEEEECCeee-eEEEeCCCchhHHHHHHHH
Q 009279 311 LKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPL-AQISLQIPGVHNVLNSLAV 388 (538)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-d~~~~~i~~~~~~g~~f~~~~~~~~~-~~~~l~l~G~hnv~NalaA 388 (538)
..++++|+.+... ++... ++ .+. ..+... ..++++++|.||++|+++|
T Consensus 237 --------------------~~~~~~~g~~~~~~~~~~~-------~~-~~~--~~~~~~~~~~~l~l~G~hn~~NalaA 286 (451)
T 3lk7_A 237 --------------------KATIVPFSTTEKVDGAYVQ-------DK-QLF--YKGENIMSVDDIGVPGSHNVENALAT 286 (451)
T ss_dssp --------------------SSEEEEEESSSCCSSEEEE-------TT-EEE--ETTEEEEEGGGSSSCSHHHHHHHHHH
T ss_pred --------------------CCeEEEEccCCCcCCEEEE-------CC-EEE--ECCcEEeeccccCCCcHHHHHHHHHH
Confidence 2467888875432 22211 12 222 223211 2357899999999999999
Q ss_pred HHHHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEEE-CCCCHHHHHHHHHHHHhhCCCCeEEEEEcc
Q 009279 389 IATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD-FAHHPTEVRAVLQAARQRFPNKALIAVFQP 467 (538)
Q Consensus 389 ia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D-~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~ 467 (538)
++++..+|++ .+.|+++|++|+++|||||++...+++.+|+| |||||+++.++++.+ +++|+++|+|.
T Consensus 287 ia~a~~lgi~-------~~~i~~~L~~f~~~~gR~e~v~~~~g~~vi~D~~a~np~a~~~al~~~----~~~rii~I~g~ 355 (451)
T 3lk7_A 287 IAVAKLAGIS-------NQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGF----DNTKVILIAGG 355 (451)
T ss_dssp HHHHHHHTCC-------HHHHHHHHHHCCCCTTSSEEEEEETTEEEEECTTCCSHHHHHHHHHTS----CGGGEEEEECC
T ss_pred HHHHHHcCCC-------HHHHHHHHHhCCCCCCcEEEEeeeCCcEEEEeCCCCCHHHHHHHHHhC----CCCCEEEEECC
Confidence 9999999997 89999999999999999999987789999999 699999999987653 34568889884
Q ss_pred CCCCchHHHHHHHHHHhccCCEEEEecc
Q 009279 468 HTYSRLVVLKDDFANALSEADQVVVSAV 495 (538)
Q Consensus 468 ~~~~r~~~~~~~~~~~~~~~D~vi~~~~ 495 (538)
. ++++++ .++.+.+..+|.+|+++.
T Consensus 356 ~--~r~~d~-~~l~~~l~~~d~vi~~G~ 380 (451)
T 3lk7_A 356 L--DRGNEF-DELIPDITGLKHMVVLGE 380 (451)
T ss_dssp S--CCSCCC-GGGHHHHTTCSEEEECST
T ss_pred C--CCCCCH-HHHHHHHHhcCEEEEECC
Confidence 3 444544 456665556999999864
No 7
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=100.00 E-value=4.8e-54 Score=441.24 Aligned_cols=307 Identities=29% Similarity=0.428 Sum_probs=252.0
Q ss_pred CCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC-hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS-SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 73 ~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~-~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
|+.++|+|||+|++||+++|++|+.+|++|.|+|.+.. +..+.+.+.|+.+..++++..+.. ..+|+||+|||||
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~----~~~d~vV~Spgi~ 77 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDE----FKADVYVIGNVAK 77 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGS----CCCSEEEECTTCC
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCC----CCCCEEEECCCcC
Confidence 34578999999999999999999999999999998754 456778889999999977665420 1489999999999
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHH-hcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCc-c---
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKL-TEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGS-I--- 226 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~-~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~-~--- 226 (538)
+++|++++|++.|+||+++.+++.+. .+..++|+||||||||||++|++++|+.+|++++..+|+....++... .
T Consensus 78 ~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p 157 (326)
T 3eag_A 78 RGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQT 157 (326)
T ss_dssp TTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCC
T ss_pred CCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCc
Confidence 99999999999999999999998873 556789999999999999999999999999987655553222222110 1
Q ss_pred ----ccCCCcEEEEeecCccee-------eccccCcEEEEcCCCccccccCCCHHHHHHHHHHHhhcccCCcEEEEcCCC
Q 009279 227 ----FYGGGKNFVLEADEYDGC-------FLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDS 295 (538)
Q Consensus 227 ----~~~~~~~~VlE~~~~d~~-------~~~~~p~vaVITNI~~DHld~~gs~e~~~~~k~~~~~~~~~~~~~Vln~dd 295 (538)
...+.+++|+|++++|.. ...++|+++|||||++||+|||||+|+|+++|.++++.+++++.+|+|.||
T Consensus 158 ~~~~~~~~~~~~V~E~ss~~~~~~~~~~~~~~~~P~vaviTNI~~DHLd~~gs~e~y~~aK~~i~~~~~~~~~~V~n~Dd 237 (326)
T 3eag_A 158 PRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYLVRTVPSEGLIVCNGRQ 237 (326)
T ss_dssp CSSCTTSCCCEEEEECCCSEEETTEEEEGGGGSCCSEEEECCCCCCCTTTSSSHHHHHHHHHHHHTTSCTTSEEEEESSC
T ss_pred cccccCCCCCEEEEEccccccchhhcccceeEecCCEEEECCCcHHHHhhcCCHHHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 112568999999998754 234799999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEECCeeeeEEEeC
Q 009279 296 QCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLAQISLQ 375 (538)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~ 375 (538)
+....+..... ..++++||. .+||++.++.. ++. |.+..++.....++++
T Consensus 238 ~~~~~~~~~~~------------------------~~~~~~~g~--~~d~~~~~~~~---~g~-f~~~~~~~~~~~~~l~ 287 (326)
T 3eag_A 238 QSLQDTLDKGC------------------------WTPVEKFGT--EHGWQAGEANA---DGS-FDVLLDGKTAGRVKWD 287 (326)
T ss_dssp HHHHHHHTTCC------------------------CSCEEEESS--SSSEEEEEECT---TSC-EEEEETTEEEEEECCC
T ss_pred HHHHHHHhhcc------------------------CCCEEEECC--CCcEEEEEecC---CcE-EEEEECCceEEEEEec
Confidence 98776553211 146778884 46787776642 355 8877766544578999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCC
Q 009279 376 IPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS 420 (538)
Q Consensus 376 l~G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~ 420 (538)
++|+||++|+++|++++..+|++ .+.|+++|++|+|++
T Consensus 288 l~G~hNv~NalaAia~a~~lGi~-------~~~i~~~L~~f~gv~ 325 (326)
T 3eag_A 288 LMGRHNRMNALAVIAAARHVGVD-------IQTACEALGAFKNVK 325 (326)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTCC-------HHHHHHHHHTCCCEE
T ss_pred CCcHHHHHHHHHHHHHHHHcCCC-------HHHHHHHHHhCCCCC
Confidence 99999999999999999999997 899999999999764
No 8
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=100.00 E-value=5.9e-54 Score=458.02 Aligned_cols=360 Identities=18% Similarity=0.230 Sum_probs=274.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChh-HHHHHHCCCeEEeCCCC-CCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY-MEGLLEAGANLHIGHSV-SNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~-~~~~~~~Ga~~~~~~~~-~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
++|+|+|+|++||++ |++|+.+|++|.++|.+.... ...+. .|+.+..++.. +.+. .+|+||+||+++++
T Consensus 6 ~~v~viG~G~~G~~~-a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~------~~d~vV~s~gi~~~ 77 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSC-VDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLM------AADLIVASPGIALA 77 (439)
T ss_dssp CCEEEECCHHHHHHH-HHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHH------TCSEEEECTTSCTT
T ss_pred CEEEEEeecHHHHHH-HHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhc------cCCEEEeCCCCCCC
Confidence 569999999999998 799999999999999765432 23455 79999888643 2232 47999999999999
Q ss_pred CHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCCccccCCCcE
Q 009279 154 NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKN 233 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~~~~~~~~~~ 233 (538)
+|.+..|++.+++++++.+++.+.. +.++|+||||||||||++||+++|+++|++++ ..|+....+ ........++
T Consensus 78 ~p~~~~a~~~~~~v~~~~~~~~~~~-~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~~-~~gnig~~~--~~~~~~~~d~ 153 (439)
T 2x5o_A 78 HPSLSAAADAGIEIVGDIELFCREA-QAPIVAITGSNGKSTVTTLVGEMAKAAGVNVG-VGGNIGLPA--LMLLDDECEL 153 (439)
T ss_dssp CHHHHHHHHTTCEEECHHHHHHHHC-CSCEEEEECSSSHHHHHHHHHHHHHHTTCCEE-EEESSSBCH--HHHCCTTCCE
T ss_pred CHHHHHHHHCCCcEEEHHHHHHHhc-CCCEEEEECCCCHHHHHHHHHHHHHhcCCCEE-EecccCHHH--HHHhCCCCCE
Confidence 9999999999999999999988874 58999999999999999999999999999865 444421110 0111134589
Q ss_pred EEEeecCcceee-ccccCcEEEEcCCCccccccC-CCHHHHHHHHHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCc
Q 009279 234 FVLEADEYDGCF-LGLSPSVAVVTNLDWEHVDIF-EDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGL 311 (538)
Q Consensus 234 ~VlE~~~~d~~~-~~~~p~vaVITNI~~DHld~~-gs~e~~~~~k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~ 311 (538)
+|+|+++.+... ..++|+++|||||++||+|+| +|+|+|+++|.+++. +++.+|+|.|||....+...
T Consensus 154 ~VlE~~~~~l~~~~~~~p~vaviTNI~~DHld~~G~t~e~i~~~K~~i~~---~~~~~V~n~dd~~~~~~~~~------- 223 (439)
T 2x5o_A 154 YVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYE---NAKVCVVNADDALTMPIRGA------- 223 (439)
T ss_dssp EEEECCHHHHHTCCCCCCSEEEECCCCSCCGGGCTTHHHHHHHHHHGGGT---TCSEEEEETTCGGGSCSCCC-------
T ss_pred EEEECCchhhcccccCCCCEEEEeCCChhhcccccCCHHHHHHHHHHHHc---CCCEEEEeCCCHHHHHHhhc-------
Confidence 999998754322 247999999999999999999 799999999988875 46899999999864322110
Q ss_pred cccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEECCeeee-EEEeCCCchhHHHHHHHHHH
Q 009279 312 KYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCERGRPLA-QISLQIPGVHNVLNSLAVIA 390 (538)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~-~~~l~l~G~hnv~NalaAia 390 (538)
..++++|+.+. .++. ++... ++ .+.+. .+.... .+.++++|.||++|+++|++
T Consensus 224 -------------------~~~~~~~g~~~-~~~~--~~~~~--~~-~~~~~-~~~~~~~~~~l~l~G~hn~~NalaA~a 277 (439)
T 2x5o_A 224 -------------------DERCVSFGVNM-GDYH--LNHQQ--GE-TWLRV-KGEKVLNVKEMKLSGQHNYTNALAALA 277 (439)
T ss_dssp -------------------SSCCEEECSSS-SSEE--EEEET--TE-EEEEE-TTEEEEEGGGCSCCSHHHHHHHHHHHH
T ss_pred -------------------CCcEEEEeCCC-cCcC--cEEEE--CC-EEEEe-CCcEEEeehhcCCCCHHHHHHHHHHHH
Confidence 14567887642 2221 12111 12 23222 222111 24689999999999999999
Q ss_pred HHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEEE-CCCCHHHHHHHHHHHHhhCCCCeEEEEEccCC
Q 009279 391 TVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDD-FAHHPTEVRAVLQAARQRFPNKALIAVFQPHT 469 (538)
Q Consensus 391 ~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D-~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~ 469 (538)
++..+|++ .+.|+++|++|+++|||||++...+++.+|+| |||||+|++++++.+++ .+|+++|||+.
T Consensus 278 ~~~~lgi~-------~~~i~~~L~~f~~~~gR~e~~~~~~~~~vi~Ds~a~np~a~~~al~~l~~---~~~~i~v~g~~- 346 (439)
T 2x5o_A 278 LADAAGLP-------RASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHV---DGTLHLLLGGD- 346 (439)
T ss_dssp HHHHTTCC-------HHHHHHHHHHCCCCTTSSEEEEEETTEEEEECTTCCSHHHHHHHHTTCCC---SSCEEEEEESB-
T ss_pred HHHHcCCC-------HHHHHHHHHhCCCCCCceEEEEEECCEEEEEeCCCCCHHHHHHHHHhCCc---CCCEEEEEcCC-
Confidence 99999997 89999999999999999999987778999999 89999999999887653 36889999863
Q ss_pred CCchHHHHHHHHHHhc-cCCEEEEeccC
Q 009279 470 YSRLVVLKDDFANALS-EADQVVVSAVL 496 (538)
Q Consensus 470 ~~r~~~~~~~~~~~~~-~~D~vi~~~~~ 496 (538)
.++.++ ..+.+.+. .+|.+|+++..
T Consensus 347 -~k~~~~-~~~~~~l~~~~d~vi~~g~~ 372 (439)
T 2x5o_A 347 -GKSADF-SPLARYLNGDNVRLYCFGRD 372 (439)
T ss_dssp -CTTCCC-GGGGGGSCSSSEEEEEESTT
T ss_pred -CCCCCH-HHHHHHHHhhCCEEEEECCC
Confidence 343232 34555444 58999998754
No 9
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=100.00 E-value=3.5e-51 Score=446.33 Aligned_cols=391 Identities=19% Similarity=0.212 Sum_probs=283.8
Q ss_pred chhhHhhhccCCceeeecccccc--c-----chhhhhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChh
Q 009279 40 APSILLFMKKKNSVSVLTNCTFK--R-----NEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY 112 (538)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~ 112 (538)
.|.-|..|+++++++.+.+.... + .+..++.+..|+|+| .-|. .|++.+|.++|||| |
T Consensus 27 ~~~~m~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~i~~v~~DSR~v---~~g~-------lFval~G~~~dGh~-----f 91 (535)
T 2wtz_A 27 RPNAVVGVRLAALADQVGAALAEGPAQRAVTEDRTVTGVTLRAQDV---SPGD-------LFAALTGSTTHGAR-----H 91 (535)
T ss_dssp CCSCCCCCBHHHHHHHHTCEESSCC--CCSTTTCBCCEEESCGGGC---CTTE-------EEEECBCSSCBGGG-----G
T ss_pred CCcccccccHHHHHhhccccccccccccccCCCcceeeEEecCCcC---CCCC-------EEEEeccccccHHH-----H
Confidence 44446668999998887765332 1 245678889998876 2222 23344999999999 9
Q ss_pred HHHHHHCCCeEEeCCCCCC--cCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCC
Q 009279 113 MEGLLEAGANLHIGHSVSN--IQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSH 190 (538)
Q Consensus 113 ~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~d~vvvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTn 190 (538)
+.++.++||.+++.+.+.. +.. .....++++. +...++.... ..++++|+.+.++|||||||
T Consensus 92 i~~A~~~GA~avv~~~~~~~~~~~---~~~~~~i~v~----d~~~aL~~la---------~~~~~~p~~~~~vI~VTGTn 155 (535)
T 2wtz_A 92 VGDAIARGAVAVLTDPAGVAEIAG---RAAVPVLVHP----APRGVLGGLA---------ATVYGHPSERLTVIGITGTS 155 (535)
T ss_dssp HHHHHHTTCCEEEECHHHHHHHCS---CCSSCEEECS----SSHHHHHHHH---------HHHTTCGGGSSEEEEEESSS
T ss_pred HHHHHHCCCeEEEEecCccccccc---CCCceEEEEC----CHHHHHHHHH---------HHHhcCccccceEEEeeCCC
Confidence 9999999999887654210 000 0011233332 2333343331 14566777778999999999
Q ss_pred CchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-----Cc--------------cccCCCcEEEEeecCcce---eeccc
Q 009279 191 GKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD-----GS--------------IFYGGGKNFVLEADEYDG---CFLGL 248 (538)
Q Consensus 191 GKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~-----~~--------------~~~~~~~~~VlE~~~~d~---~~~~~ 248 (538)
|||||++||+++|+++|++++ +.|+....++. .. +...+.+++|+|+++... ....+
T Consensus 156 GKTTT~~ml~~iL~~~G~~~g-~~gs~~~~i~~~~~~~~~tt~e~~~l~~~l~~~~~~~~d~~VlEvgs~~l~~~rl~~~ 234 (535)
T 2wtz_A 156 GKTTTTYLVEAGLRAAGRVAG-LIGTIGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGT 234 (535)
T ss_dssp CHHHHHHHHHHHHHHTTCCEE-EESSSCEEETTEEECCSSSSCCHHHHHHHHHHHHHTTCCEEEEECCHHHHHTTTTTTC
T ss_pred ChHHHHHHHHHHHHHCCCCEE-EECCcceeECCEecccCCccCcHHHHHHHHHHHHhCCCCEEEEECCCccccccccccC
Confidence 999999999999999999865 44443222221 00 012457899999985211 12237
Q ss_pred cCcEEEEcCCCccccccCCCHHHHHHHHHHHhhccc--CCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccc
Q 009279 249 SPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIR--VGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLW 326 (538)
Q Consensus 249 ~p~vaVITNI~~DHld~~gs~e~~~~~k~~~~~~~~--~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (538)
+|+++|||||++||+|+|||+|+|+++|.+++...+ +++.+|+|.||+....+....
T Consensus 235 ~p~vaViTNI~~DHld~~gs~e~ia~aK~~i~~~~~~~~~g~~Vln~Dd~~~~~~~~~~--------------------- 293 (535)
T 2wtz_A 235 RFAVGAFTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARA--------------------- 293 (535)
T ss_dssp CEEEEEECCCCSCCTTTSSSHHHHHHHHHTTTCTTSTTCCSEEEEECSSHHHHHHHHHH---------------------
T ss_pred CcCEEEEcCCChHHhhhcCCHHHHHHHHHHHhccccccCCCeEEEECCCHHHHHHHHhc---------------------
Confidence 899999999999999999999999999999987664 568999999999877765432
Q ss_pred cCCCCceEEEeeccCCC-cceEeeeeecCCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHhcCCccCCccc
Q 009279 327 GQGHDYKIITYGFSSFN-DWYAESVCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHES 405 (538)
Q Consensus 327 ~~~~~~~~~~~g~~~~~-d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~lgi~~~~~~~~ 405 (538)
.++++|+....+ |+++.++.....++..|.+...+.....+.++++|.||++|+++|++++..+|++
T Consensus 294 -----~~v~~~g~~~~~~d~~~~~i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~lGi~------- 361 (535)
T 2wtz_A 294 -----ADAITVSAADRPAHWRATDVAPTDAGGQQFTAIDPAGVGHHIGIRLPGRYNVANCLVALAILDTVGVS------- 361 (535)
T ss_dssp -----SSCEEEESSSSCCSEEEEEEEEETTTEEEEEEECTTSCEEEEEESCCSHHHHHHHHHHHHHHHHTTCC-------
T ss_pred -----CCEEEEecCCCcCcEEEEEEEEcCCCCeEEEEEeCCceEEEEEeCCCCHHHHHHHHHHHHHHHHcCCC-------
Confidence 145788876555 8888776654124567777654432236889999999999999999999999997
Q ss_pred HHHHHHHhccCCCCCCceEEEeeeCCeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHH-h
Q 009279 406 IACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANA-L 484 (538)
Q Consensus 406 ~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~-~ 484 (538)
.+.|+++|++|+ +|||||++...+++++|+||||||+|+++++++++ . +.+|+++|||+++ .++......+.+. .
T Consensus 362 ~~~i~~~L~~~~-~~gR~e~v~~~~~~~viiDyahNP~s~~aal~~l~-~-~~~r~i~V~G~~g-dr~~~~~~~~~~~a~ 437 (535)
T 2wtz_A 362 PEQAVPGLREIR-VPGRLEQIDRGQGFLALVDYAHKPEALRSVLTTLA-H-PDRRLAVVFGAGG-DRDPGKRAPMGRIAA 437 (535)
T ss_dssp HHHHHHHHTTCC-CTTSSEECCSSCSSEEEEECCCSHHHHHHHHHTTC-C-SSSCEEEEECCCT-TSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCceEEEEcCCCcEEEEECCCCHHHHHHHHHHhh-C-CCCcEEEEECCCC-ccchhhHHHHHHHHH
Confidence 899999999999 99999999754578899999999999999999998 4 5578999999865 4444433444442 2
Q ss_pred ccCCEEEEeccCCCC
Q 009279 485 SEADQVVVSAVLVFW 499 (538)
Q Consensus 485 ~~~D~vi~~~~~~~~ 499 (538)
+.+|.+++++.+++.
T Consensus 438 ~~~d~vi~~~~~~r~ 452 (535)
T 2wtz_A 438 QLADLVVVTDDNPRD 452 (535)
T ss_dssp HHCSEEEECCSCCTT
T ss_pred hcCCEEEEcCCCCCC
Confidence 468999999876654
No 10
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=100.00 E-value=5.4e-51 Score=441.71 Aligned_cols=368 Identities=19% Similarity=0.172 Sum_probs=266.8
Q ss_pred hhhhhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCC-----c-CCCCCC
Q 009279 65 EECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSN-----I-QGNDGS 138 (538)
Q Consensus 65 ~~~~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~-----~-~~~~~~ 138 (538)
+..++.+..|+|+| .-|. .|++.+|.++|||| |+.++.++||.+++.+.+.. + ..
T Consensus 18 ~~~i~~v~~DSR~v---~~g~-------lFval~G~~~DGh~-----fi~~A~~~GA~avv~~~~~~~~~~e~~~~---- 78 (498)
T 1e8c_A 18 SRALREMTLDSRVA---AAGD-------LFVAVVGHQADGRR-----YIPQAIAQGVAAIIAEAKDEATDGEIREM---- 78 (498)
T ss_dssp CCBCCCEESCGGGC---CTTC-------EEEECBCSSCBGGG-----GHHHHHHTTCSEEEEECTTTCCTTCEEEE----
T ss_pred CceeeeEEeeCcCC---CCCC-------EEEEecCCcCCHHH-----HHHHHHHCCCeEEEEcCcccccccccccc----
Confidence 34566778888876 2222 33344999999999 99999999999888654310 0 00
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCC
Q 009279 139 RFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHV 218 (538)
Q Consensus 139 ~~~d~vvvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~ 218 (538)
....++++. +...++.... ..++++|+.+.++||||||||||||++||+++|+++|++++.+. +..
T Consensus 79 ~~~~~i~V~----d~~~aL~~la---------~~~~~~p~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~~~~~~g-s~~ 144 (498)
T 1e8c_A 79 HGVPVIYLS----QLNERLSALA---------GRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMG-TVG 144 (498)
T ss_dssp TTEEEEEET----THHHHHHHHH---------HHHTTCGGGSSEEEEEESSSCHHHHHHHHHHHHHHTTCCEEEEE-TTE
T ss_pred CCccEEEEC----CHHHHHHHHH---------HHHhCCCcccCeEEEEeCCcChHHHHHHHHHHHHhCCCCEEEEC-CCC
Confidence 001123332 2223333321 14556677778999999999999999999999999999875543 322
Q ss_pred CCCCCC-----c--------------cccCCCcEEEEeecCcce---eeccccCcEEEEcCCCccccccCCCHHHHHHHH
Q 009279 219 PQFPDG-----S--------------IFYGGGKNFVLEADEYDG---CFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIF 276 (538)
Q Consensus 219 ~~~~~~-----~--------------~~~~~~~~~VlE~~~~d~---~~~~~~p~vaVITNI~~DHld~~gs~e~~~~~k 276 (538)
..++.. . +.....+++|+|+++... ....++|+++|||||++||+|+|||+|+|+++|
T Consensus 145 ~~i~~~~~~~~~t~~~~~~l~~~l~~~~~~~~d~~VlEvgs~~l~~~rl~~~~p~vaViTNI~~DHld~~gt~e~ia~aK 224 (498)
T 1e8c_A 145 NGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAK 224 (498)
T ss_dssp EEETTCCBCCSSSSCCHHHHHHHHHHHHHTTCCEEEEECCHHHHHTTTTTTCBCSEEEECCCCSCCHHHHSSHHHHHHHH
T ss_pred cccCCeeeecCCCCCCHHHHHHHHHHHHhCCCCEEEEEcCCchhhcccccccCCCEEEEeCCChhhhhccCCHHHHHHHH
Confidence 111110 0 012456899999974221 122468999999999999999999999999999
Q ss_pred HHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCC---cceEeeeeec
Q 009279 277 RRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFN---DWYAESVCPN 353 (538)
Q Consensus 277 ~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---d~~~~~i~~~ 353 (538)
.+++.. ++++.+|+|.||+....+...... .+.++++||....+ |+++.++...
T Consensus 225 ~~i~~~-~~~~~~V~n~dd~~~~~~~~~~~~----------------------~~~~v~~~g~~~~~~~~d~~~~~~~~~ 281 (498)
T 1e8c_A 225 WLLYSE-HHCGQAIINADDEVGRRWLAKLPD----------------------AVAVSMEDHINPNCHGRWLKATEVNYH 281 (498)
T ss_dssp HHHHHT-SBCCEEEEETTSHHHHHHHTTCTT----------------------CEEEESSSCCCTTTCSEEEEEEEEEEC
T ss_pred HHHhcc-CCCCeEEEECCCHHHHHHHHhhhc----------------------cCCcEEEEecCCCCCcCCEEEEEEEEc
Confidence 999987 667899999999987766543210 01256777765445 7877776654
Q ss_pred CCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeE
Q 009279 354 VQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433 (538)
Q Consensus 354 ~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ 433 (538)
. ++..|.+..++.. ..+.++++|.||++|+++|++++..+|++ .+.|+++|++|+++|||||++...++++
T Consensus 282 ~-~g~~f~~~~~~~~-~~~~l~l~G~hnv~NalaAia~~~~lGi~-------~~~i~~~L~~~~~~~gR~e~v~~~~~~~ 352 (498)
T 1e8c_A 282 D-SGATIRFSSSWGD-GEIESHLMGAFNVSNLLLALATLLALGYP-------LADLLKTAARLQPVCGRMEVFTAPGKPT 352 (498)
T ss_dssp S-SCEEEEEEETTCC-EEEEECSCSHHHHHHHHHHHHHHHHTTCC-------HHHHHHHGGGCCCCTTSSEEECCTTSCE
T ss_pred C-CceEEEEEECCce-EEEEecCCcHHHHHHHHHHHHHHHHcCCC-------HHHHHHHHHhCCCCCCceEEEEcCCCCE
Confidence 3 4667877655443 47889999999999999999999999997 8999999999999999999997545779
Q ss_pred EEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHHh-ccCCEEEEeccCCCC
Q 009279 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANAL-SEADQVVVSAVLVFW 499 (538)
Q Consensus 434 ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~-~~~D~vi~~~~~~~~ 499 (538)
+|+||||||+|++++++++++.. .+|+++|||+.+ .++......+.++. ..+|.+++++.+++.
T Consensus 353 vi~DyahnP~s~~a~l~~l~~~~-~~r~i~V~G~g~-dr~~~~~~~~~~~~~~~~d~vi~~~~~~r~ 417 (498)
T 1e8c_A 353 VVVDYAHTPDALEKALQAARLHC-AGKLWCVFGCGG-DRDKGKRPLMGAIAEEFADVAVVTDDNPRT 417 (498)
T ss_dssp EEEECCCSHHHHHHHHHHHHHTC-SSCEEEEECCCS-SSCSTHHHHHHHHHHHHCSEEEECCSCCBT
T ss_pred EEEECCCCHHHHHHHHHHHHhhC-CCCEEEEECCCC-CcchhHHHHHHHHHHhCCCEEEEcCCCCCC
Confidence 99999999999999999999763 468999999754 34443333444433 468999999876544
No 11
>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=100.00 E-value=4.7e-50 Score=429.35 Aligned_cols=379 Identities=15% Similarity=0.153 Sum_probs=270.2
Q ss_pred hhccCCceeeecccccccchhhhhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEe
Q 009279 46 FMKKKNSVSVLTNCTFKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125 (538)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~ 125 (538)
.|++.++.+.+.++.. +.+..+..+..|+|++ .-|. .|++.+|.+++||| |+.++.++|+.+++
T Consensus 3 ~~~l~~i~~~~~~~~~-~~~~~i~~i~~Dsr~v---~~g~-------lf~al~G~~~dgh~-----f~~~a~~~Ga~~vv 66 (452)
T 1gg4_A 3 SVTLSQLTDILNGELQ-GADITLDAVTTDTRKL---TPGC-------LFVALKGERFDAHD-----FADQAKAGGAGALL 66 (452)
T ss_dssp CEEHHHHHHHTTEEEE-SCCCEESCEESCGGGC---CTTC-------EEECCBCSSCBTTT-----THHHHHHTTCCEEE
T ss_pred cCcHHHHHHHhCCEEe-CCCceEEEEEEeCCCc---CCCc-------EEEEeCCCCCCHHH-----HHHHHHHcCCEEEE
Confidence 3677777777666543 2245677788888766 2221 23344899999999 99999999998877
Q ss_pred CCCCCCcCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 126 GHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
.+..... ....+.+. +....+... ....+...+.++||||||||||||++||+++|++
T Consensus 67 ~~~~~~~-------~~p~i~v~----~~~~~l~~l-----------a~~~~~~~~~~vI~VTGTnGKTTT~~~l~~iL~~ 124 (452)
T 1gg4_A 67 VSRPLDI-------DLPQLIVK----DTRLAFGEL-----------AAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQ 124 (452)
T ss_dssp ESSCCSC-------SSCEEEES----CHHHHHHHH-----------HHHHHHHSCCEEEEEECSSCHHHHHHHHHHHHTT
T ss_pred ECCCcCC-------CCCEEEEC----CHHHHHHHH-----------HHHHhcCCCCCEEEEeCCCCcHHHHHHHHHHHHh
Confidence 6543110 11234442 222222221 1111111357899999999999999999999999
Q ss_pred cCCCeEEEeCCCCCCCCCCc--c-ccCCCcEEEEeecCcce-----eeccccCcEEEEcCCCccccccCCCHHHHHHHHH
Q 009279 206 MGDDLTAIVGAHVPQFPDGS--I-FYGGGKNFVLEADEYDG-----CFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFR 277 (538)
Q Consensus 206 ~G~~v~~~~g~~~~~~~~~~--~-~~~~~~~~VlE~~~~d~-----~~~~~~p~vaVITNI~~DHld~~gs~e~~~~~k~ 277 (538)
+| +++.+.|+....++... . ...+.+++|+|++..+. ....++|+++|||||++||+|+|||+|+|+++|.
T Consensus 125 ~g-~~~~t~g~~n~~ig~p~t~~~~~~~~d~~VlE~g~~~~~~~~~~~~~~~p~vaviTNI~~DHld~~gt~e~~~~aK~ 203 (452)
T 1gg4_A 125 CG-NTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKG 203 (452)
T ss_dssp TS-CEEECCTTCCSTTHHHHHHTTCCTTCSEEEEECCCSSSSHHHHHHHHHCCSEEEECCCC--------CHHHHHHHHH
T ss_pred cC-CEeeccccccCCcchhHHHHcCCCCCcEEEEEeCCCCcchHHHHhCccCCCEEEECCCChHHhhhcCCHHHHHHHHH
Confidence 99 45554455433322110 0 12357899999985433 2224799999999999999999999999999999
Q ss_pred HHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccC-CCcceEeeeeecCCC
Q 009279 278 RFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSS-FNDWYAESVCPNVQG 356 (538)
Q Consensus 278 ~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~i~~~~~~ 356 (538)
+++..+++++.+|+|.||+....+.+ ... ..++++|+... .+|+++.++.... .
T Consensus 204 ~i~~~~~~~~~~V~n~dd~~~~~~~~-~~~-----------------------~~~~~~~g~~~~~~d~~~~~~~~~~-~ 258 (452)
T 1gg4_A 204 EIFSGLPENGIAIMNADNNDWLNWQS-VIG-----------------------SRKVWRFSPNAANSDFTATNIHVTS-H 258 (452)
T ss_dssp GGGGGCCTTCEEEEETTBCCHHHHHH-HHT-----------------------TSEEEEECSSCTTCSBEEEEEEECS-S
T ss_pred HHHhhcccCCEEEEeCCcHHHHHHHH-hhc-----------------------CCCEEEEeCCCCCCcEEEEEEEEcC-C
Confidence 99998888899999999998776542 111 14678898754 4678877765542 4
Q ss_pred CeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEE
Q 009279 357 GSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYD 436 (538)
Q Consensus 357 g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~ 436 (538)
+..|.+..++.. ..+.++++|.||++|+++|++++..+|++ .+.|+++|++|+++|||||++...+++.+|+
T Consensus 259 g~~~~~~~~~~~-~~~~l~l~G~hn~~NalaA~a~~~~lgi~-------~~~i~~~L~~~~~~~gR~e~~~~~~~~~vid 330 (452)
T 1gg4_A 259 GTEFTLQTPTGS-VDVLLPLPGRHNIANALAAAALSMSVGAT-------LDAIKAGLANLKAVPGRLFPIQLAENQLLLD 330 (452)
T ss_dssp SEEEEEEETTEE-EEEEECSSSTHHHHHHHHHHHHHHHTTCC-------HHHHHHHHTTCCCCTTSSEEEEEETTEEEEE
T ss_pred ceEEEEEECCCE-EEEEeCCCcHHHHHHHHHHHHHHHHcCCC-------HHHHHHHHHhCCCCCCCceEEECCCCcEEEE
Confidence 667877765543 46899999999999999999999999997 8999999999999999999998667899999
Q ss_pred E-CCCCHHHHHHHHHHHHhhCCCCeEEEEEccCC--CCchHHHHHHHHHHhc--cCCEEEEeccCCC
Q 009279 437 D-FAHHPTEVRAVLQAARQRFPNKALIAVFQPHT--YSRLVVLKDDFANALS--EADQVVVSAVLVF 498 (538)
Q Consensus 437 D-~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~--~~r~~~~~~~~~~~~~--~~D~vi~~~~~~~ 498 (538)
| |||||+|++++++++++. + +|+++|||++. ..+....+..+.+.+. .+|.||+++..+.
T Consensus 331 Dsyahnp~s~~~~l~~l~~~-~-~~~i~V~G~~~e~g~~~~~~~~~~~~~~~~~~~d~vi~~g~~~~ 395 (452)
T 1gg4_A 331 DSYNANVGSMTAAVQVLAEM-P-GYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSH 395 (452)
T ss_dssp CCSCCCHHHHHHHHHHHHHS-S-SEEEEEECCCCCCTTHHHHHHHHHHHHHHHHTCSEEEEESSSTH
T ss_pred eCCCCCHHHHHHHHHHHHhc-c-CCEEEEECCccccCChhHHHHHHHHHHHHHcCCCEEEEECcCHH
Confidence 9 999999999999999974 4 68999999863 2444444567777443 6999999986543
No 12
>2am1_A SP protein, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-A alanine ligase, MURF protein; HET: 1LG; 2.50A {Streptococcus pneumoniae} PDB: 2am2_A*
Probab=100.00 E-value=7e-49 Score=420.67 Aligned_cols=369 Identities=18% Similarity=0.216 Sum_probs=265.9
Q ss_pred hccCCceeeecccccc-cc--hhhhhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 47 MKKKNSVSVLTNCTFK-RN--EECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 47 ~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
|+++++.+.+.+.. . .. +..+..+..|+|++ .-|. .|++.+|. ++||| |+.++.++|+.+
T Consensus 3 ~~~~~i~~~~~~~~-~~~~~~~~~i~~i~~Dsr~v---~~g~-------lF~al~G~-~dgh~-----~~~~a~~~Ga~~ 65 (454)
T 2am1_A 3 LTIHEIAQVVGAKN-DISIFEDTQLEKAEFDSRLI---GTGD-------LFVPLKGA-RDGHD-----FIETAFENGAAV 65 (454)
T ss_dssp CBHHHHHHHHTCSS-CSTTSCCCBCCCEESCGGGC---CTTC-------EECCCBSS-SBGGG-----GHHHHHHHTCSE
T ss_pred CcHHHHHHHhCCcc-cCCCccCceeeeEEEeCCCC---CCCC-------EEEEccCC-cchHH-----HHHHHHHCCCEE
Confidence 56667776666654 2 11 34677788888876 3322 34445899 99999 999999999988
Q ss_pred EeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHH
Q 009279 124 HIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVL 203 (538)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL 203 (538)
++.+.... . ...+++. +....+.... ..+..++ +.++||||||||||||++||+++|
T Consensus 66 vv~~~~~~-~-------~p~i~v~----~~~~al~~la---------~~~~~~~--~~~vI~VTGTnGKTTT~~~l~~iL 122 (454)
T 2am1_A 66 TLSEKEVS-N-------HPYILVD----DVLTAFQSLA---------SYYLEKT--TVDVFAVTGSNGKTTTKDMLAHLL 122 (454)
T ss_dssp EEESSCCC-S-------SCEEECS----CHHHHHHHHH---------HHHHHHH--CCEEEEEECCCSSSCHHHHHHHHH
T ss_pred EEECCCCC-C-------CCEEEEC----CHHHHHHHHH---------HHHhhCC--CCCEEEEeCCCCcHHHHHHHHHHH
Confidence 77643211 0 1233332 2222232221 0122233 679999999999999999999999
Q ss_pred HHcCCCeEEEeCCCCCCCCCCc--c-ccCCCcEEEEeecCcce-----eeccccCcEEEEcCCCccccccCCCHHHHHHH
Q 009279 204 KAMGDDLTAIVGAHVPQFPDGS--I-FYGGGKNFVLEADEYDG-----CFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSI 275 (538)
Q Consensus 204 ~~~G~~v~~~~g~~~~~~~~~~--~-~~~~~~~~VlE~~~~d~-----~~~~~~p~vaVITNI~~DHld~~gs~e~~~~~ 275 (538)
+++|. +....|+....++... . ...+.+++|+|++..+. ....++|+++|||||++||+|+|||+|+|+++
T Consensus 123 ~~~g~-~~~s~g~~n~~ig~p~t~~~~~~~~d~~VlE~g~~~~~~~~~~~~~~~p~vaviTNi~~DHld~~gt~e~~a~a 201 (454)
T 2am1_A 123 STRYK-TYKTQGNYNNEIGLPYTVLHMPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKG 201 (454)
T ss_dssp TTTSC-EEECCTTCCSTTHHHHHHHTCCTTCCEEEEECCCSSTTHHHHHHHHHCCSEEEECCCCCSSCTTCCCHHHHHHH
T ss_pred HhcCC-EeecCCccCcccchHHHHhcCCCCCcEEEEEcCCCCcchHHHHhCccCCCEEEEcCCchHhhhhcCCHHHHHHH
Confidence 99995 4444454333222110 0 12357899999986432 22247999999999999999999999999999
Q ss_pred HHHHhhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCC
Q 009279 276 FRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQ 355 (538)
Q Consensus 276 k~~~~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~ 355 (538)
|.+++..+++++.+|+|.|| ....+.. . ..++++|+....+|+ .++... .
T Consensus 202 K~~i~~~~~~~~~~V~n~dd-~~~~~~~-------------------------~-~~~~~~~g~~~~~d~--~~i~~~-~ 251 (454)
T 2am1_A 202 KMQIADGMASGSLLLAPADP-IVEDYLP-------------------------I-DKKVVRFGQGAELEI--TDLVER-K 251 (454)
T ss_dssp HGGGGTTCCTTCEEEEESCG-GGGGGCC-------------------------S-SSEEEEESTTSSBCE--EEEEEC-S
T ss_pred HHHHHhhcccCCEEEEEcHH-HHHHHHh-------------------------c-CCcEEEEeCCCCCce--eeeEEe-C
Confidence 99999888788999999998 6432110 0 147788987655666 444433 2
Q ss_pred CCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEE
Q 009279 356 GGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIY 435 (538)
Q Consensus 356 ~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii 435 (538)
++..|.+..++. .+.++++|.||++|+++|++++..+|++ .+.|+++|++|+++|||||++...+++.+|
T Consensus 252 ~~~~~~~~~~~~---~~~l~l~G~hn~~NalaA~a~~~~lgi~-------~~~i~~~L~~~~~~~gR~e~~~~~~~~~ii 321 (454)
T 2am1_A 252 DSLTFKANFLEQ---ALDLPVTGKYNATNAMIASYVALQEGVS-------EEQIRLAFQHLELTRNRTEWKKAANGADIL 321 (454)
T ss_dssp SCEEEEETTCSS---EEEESSCCHHHHHHHHHHHHHHHHTTCC-------HHHHHHHGGGCCCCCCCSCEECCTTTCEEE
T ss_pred CceEEEEEecCc---EEEecCCCHHHHHHHHHHHHHHHHcCCC-------HHHHHHHHHhCCCccCCeeEEECCCCeEEE
Confidence 355666543222 6789999999999999999999999997 899999999999999999999765678899
Q ss_pred EE-CCCCHHHHHHHHHHHHhhCCC---CeEEEEEccCC--CCchHHHHHHHHHHhc--cCCEEEEeccCC
Q 009279 436 DD-FAHHPTEVRAVLQAARQRFPN---KALIAVFQPHT--YSRLVVLKDDFANALS--EADQVVVSAVLV 497 (538)
Q Consensus 436 ~D-~Ahnp~s~~a~l~~l~~~~~~---~r~i~V~g~~~--~~r~~~~~~~~~~~~~--~~D~vi~~~~~~ 497 (538)
|| |||||+|++++++++++. +. +|+++|||++. +.+....+..+.+.+. .+|.||+++..+
T Consensus 322 DDsyahnp~s~~~~l~~l~~~-~~~~~~~~i~V~G~~~e~G~~~~~~~~~~~~~~~~~~~d~vi~~g~~~ 390 (454)
T 2am1_A 322 SDVYNANPTAMKLILETFSAI-PANEGGKKIAVLADMKELGDQSVQLHNQMILSLSPDVLDIVIFYGEDI 390 (454)
T ss_dssp EECSCCSHHHHHHHHHHHTTS-CCCSSCEEEEEEECCCCCCTTHHHHHHHGGGGCCTTTCSEEEEEESTT
T ss_pred EeCCCCCHHHHHHHHHHHHhc-ccccCCCEEEEECCchhcCcHHHHHHHHHHHHHHhcCCCEEEEECcCH
Confidence 99 999999999999999875 44 78999999863 3455555667887554 389999998754
No 13
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=100.00 E-value=2.5e-43 Score=379.78 Aligned_cols=298 Identities=18% Similarity=0.174 Sum_probs=227.3
Q ss_pred HHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCC------c-------------------
Q 009279 171 DYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDG------S------------------- 225 (538)
Q Consensus 171 ~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~------~------------------- 225 (538)
.+++++|+++.++||||||||||||++||++||+++|++++.++++++..+... .
T Consensus 54 l~~lg~p~~~~~vI~VtGTNGKtST~~~l~~iL~~~G~~vG~~tSp~l~~~~eri~i~G~~i~~~~~~~~~~~~~~~~~~ 133 (487)
T 2vos_A 54 MDLLGSPQRSYPSIHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYREIEPLVAL 133 (487)
T ss_dssp HHHTTCGGGSSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEECSSCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCchhcCeEEEEeCCCCcHHHHHHHHHHHHHcCCCeEEECCCCcCcccceEEECCEECCHHHHHHHHHHHHHHHhh
Confidence 356778888899999999999999999999999999999988877765322110 0
Q ss_pred ---------------c--------------ccCCCcEEEEee---cCcceeeccccCcEEEEcCCCccccccCC-CHHHH
Q 009279 226 ---------------I--------------FYGGGKNFVLEA---DEYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAV 272 (538)
Q Consensus 226 ---------------~--------------~~~~~~~~VlE~---~~~d~~~~~~~p~vaVITNI~~DHld~~g-s~e~~ 272 (538)
. .....+++|+|. +..|.. ..++|+++|||||++||+|+|| |+|+|
T Consensus 134 ~~~~~~~~~~~~~~~~t~fe~~t~~a~~~f~~~~~d~~VlEvg~gg~~d~t-n~i~p~vaVITnI~~DHld~lG~t~e~i 212 (487)
T 2vos_A 134 IDQQSQASAGKGGPAMSKFEVLTAMAFAAFADAPVDVAVVEVGMGGRWDAT-NVINAPVAVITPISIDHVDYLGADIAGI 212 (487)
T ss_dssp HHHHHHHC-----CCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTTSTT-CSSCCSEEEECCCCCCBCSCSSCCHHHH
T ss_pred hhhccccccccCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCccccc-cccCCCEEEECCcchhhhhhhCCcHHHH
Confidence 0 023468899998 456654 4579999999999999999999 89999
Q ss_pred HHHHHHHhhcc---cCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEee
Q 009279 273 KSIFRRFLKQI---RVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES 349 (538)
Q Consensus 273 ~~~k~~~~~~~---~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~ 349 (538)
+.+|++++..+ ++++.+|+|.||+....++.+.+... +.++++|+. |+.+..
T Consensus 213 a~~Ka~i~~~~~~~k~~~~~V~~~dd~~~~~~~~~~a~~~---------------------~~~~~~~g~----d~~~~~ 267 (487)
T 2vos_A 213 AGEKAGIITRAPDGSPDTVAVIGRQVPKVMEVLLAESVRA---------------------DASVAREDS----EFAVLR 267 (487)
T ss_dssp HHHHHTTCCCCC--CCCCEEEECCCCHHHHHHHHHHHHHT---------------------TCEEEEBTT----TBEEEE
T ss_pred HHHHHHHhhcccccCCCCEEEEeCCCHHHHHHHHHHHHHc---------------------CCeEEEecC----ceEEEe
Confidence 99999998654 77899999999998766654433221 145666653 455544
Q ss_pred eeecCCCCeEEEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHh-------cCCccCCcccHHHHHHHhccCCCCCCc
Q 009279 350 VCPNVQGGSDYILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTL-------IGDKRQSHESIACLKLPLSKFMGVSRR 422 (538)
Q Consensus 350 i~~~~~~g~~f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~l-------gi~~~~~~~~~~~I~~~L~~f~~~~gR 422 (538)
.... .++..|.+...+.....+.++++|.||++|+++|++++..+ |++ .+.|+++|++|+ ||||
T Consensus 268 ~~~~-~~g~~~~~~~~~~~~~~~~l~l~G~hn~~Na~aAiaa~~~l~~~~~~~gi~-------~~~i~~gL~~~~-~pGR 338 (487)
T 2vos_A 268 RQIA-VGGQVLQLQGLGGVYSDIYLPLHGEHQAHNAVLALASVEAFFGAGAQRQLD-------GDAVRAGFAAVT-SPGR 338 (487)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEEECCCSHHHHHHHHHHHHHHHHHTTC----CCC-------HHHHHHHHHTCC-CTTS
T ss_pred eccc-cCCceEEEecCCcccceeecCCCCHHHHHHHHHHHHHHHHHhhccccCCCC-------HHHHHHHHHhCc-CCCc
Confidence 4333 23556766654443336789999999999999999999998 676 799999999999 9999
Q ss_pred eEEEeeeCCeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHHhccCCEEEEeccCCCCccc
Q 009279 423 FDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLII 502 (538)
Q Consensus 423 ~E~v~~~~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~~~ 502 (538)
||++.. ++.+|+|+||||++++++++++++.++.+|+++|||++.+. +....+..+.+.+|.||+++.+..|
T Consensus 339 ~e~v~~--~~~vi~D~AHNp~a~~a~l~~l~~~~~~~~~i~V~G~~~dk---d~~~~~~~l~~~~d~vilt~~~~~r--- 410 (487)
T 2vos_A 339 LERMRS--APTVFIDAAHNPAGASALAQTLAHEFDFRFLVGVLSVLGDK---DVDGILAALEPVFDSVVVTHNGSPR--- 410 (487)
T ss_dssp SEEEET--TTEEEECCCCSHHHHHHHHHHHHHSCCCSEEEEEECCBTTB---CHHHHHHHHTTTCSEEEECCCSCTT---
T ss_pred eEEEcC--CCeEEEECCCCHHHHHHHHHHHHHhcCCCCEEEEEEecCCC---CHHHHHHHHHhhCCEEEEeCCCCcC---
Confidence 999963 67999999999999999999998765667899999987543 2223344445578999999877666
Q ss_pred ccCcHHHHHH
Q 009279 503 FAVSSFWLIM 512 (538)
Q Consensus 503 ~~~~~~~~~~ 512 (538)
+.+.+.+.+
T Consensus 411 -~~~~~~l~~ 419 (487)
T 2vos_A 411 -ALDVEALAL 419 (487)
T ss_dssp -BCCHHHHHH
T ss_pred -CCCHHHHHH
Confidence 334444544
No 14
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=100.00 E-value=3.8e-43 Score=374.52 Aligned_cols=296 Identities=16% Similarity=0.180 Sum_probs=218.9
Q ss_pred HHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-----Cc-c-------------------
Q 009279 172 YWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD-----GS-I------------------- 226 (538)
Q Consensus 172 ~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~-----~~-~------------------- 226 (538)
+.+++|.++.++|+||||||||||++||+++|+++|++++.+.++++..+.. +. +
T Consensus 43 ~~lg~p~~~~~vI~VTGTnGKtTT~~~l~~iL~~~G~~vg~~~Sphl~~~neri~inG~~i~~~~~~~~~~~~~~~~~~~ 122 (442)
T 1o5z_A 43 SKLGNPHLEYKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETMEPILNEL 122 (442)
T ss_dssp HHTTCGGGSSEEEEEECSSSHHHHHHHHHHHHHHHTCCEEEECCSCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCchhcCCEEEEECCcCHHHHHHHHHHHHHHCCCCEEEECCCCcCccceeEEECCEECCHHHHHHHHHHHHHHHhhh
Confidence 5677788888999999999999999999999999999988777654322210 00 0
Q ss_pred ----------------------ccCCCcEEEEeec---CcceeeccccCcEEEEcCCCccccccCC-CHHHHHHHHHHHh
Q 009279 227 ----------------------FYGGGKNFVLEAD---EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFL 280 (538)
Q Consensus 227 ----------------------~~~~~~~~VlE~~---~~d~~~~~~~p~vaVITNI~~DHld~~g-s~e~~~~~k~~~~ 280 (538)
.....+++|+|.+ +.|... .++|+++|||||++||+|+|| |+|+|+.+|.+++
T Consensus 123 ~~~~~~~~T~~e~~t~~a~~~f~~~~~d~~VlEvg~~g~~d~t~-~~~P~vaViTnI~~DHld~~G~t~e~ia~~K~~i~ 201 (442)
T 1o5z_A 123 DKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATN-VVFPLCSTIVTVDRDHEKTLGYTIEQIAWEKSGII 201 (442)
T ss_dssp TTSTTTCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTTCGGG-GCCCSCEEECCCCC-------CCHHHHHHHHGGGC
T ss_pred cccccCCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCccccc-cCCCCEEEECCccHhhhhhhCcCHHHHHHHHHhhc
Confidence 0235689999987 677644 478999999999999999999 8999999998776
Q ss_pred hcccCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEE
Q 009279 281 KQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY 360 (538)
Q Consensus 281 ~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f 360 (538)
++++.+|+|.||+....+....+... +.++++|+. |+.+...... ..+..|
T Consensus 202 ---~~~~~~V~~~dd~~~~~~~~~~a~~~---------------------~~~~~~~~~----d~~~~~~~~~-~~~~~~ 252 (442)
T 1o5z_A 202 ---KERVPLVTGERKREALKVMEDVARKK---------------------SSRMYVIDK----DFSVKVKSLK-LHENRF 252 (442)
T ss_dssp ---CTTCCEEECCCCHHHHHHHHHHHHHH---------------------TCCEEEBTT----TBEEEEEECC-TTCEEE
T ss_pred ---cCCccEEEcCCChHHHHHHHHHHHHc---------------------CCcEEEeCc----ceeeeccccc-cCCceE
Confidence 46789999999998777665543221 135667764 4554433222 234566
Q ss_pred EEEECCeeeeEEEeCCCchhHHHHHHHHHHHHH--HhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEEEC
Q 009279 361 ILCERGRPLAQISLQIPGVHNVLNSLAVIATVL--TLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDF 438 (538)
Q Consensus 361 ~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~--~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D~ 438 (538)
.+... .....+.++++|.||++|+++|++++. .+|++ .+.|+++|++|+ ||||||++.. ++..+|+|+
T Consensus 253 ~~~~~-~~~~~~~l~l~G~hn~~NalaAia~~~~~~lgi~-------~~~i~~~L~~~~-~~gR~e~~~~-~~~~viiD~ 322 (442)
T 1o5z_A 253 DYCGE-NTFEDLVLTMNGPHQIENAGVALKTLEATGLPLS-------EKAIREGLKNAK-NLGRFEILEK-NGKMYILDG 322 (442)
T ss_dssp EEESS-SEEEEEEESSCSTHHHHHHHHHHHHHHHHCCCCC-------HHHHHHHHHHCC-CTTSSEEEEE-TTEEEEECC
T ss_pred EEecc-ccccccccCCCcHhHHHHHHHHHHHHHHhhcCCC-------HHHHHHHHHhCC-CCCceEEEEc-CCCeEEEEC
Confidence 66533 222267899999999999999999999 99997 799999999999 9999999974 447899999
Q ss_pred CCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHHhccCCEEEEeccCCCCcccccCcHHHHHHHH
Q 009279 439 AHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFWLIIFAVSSFWLIMAI 514 (538)
Q Consensus 439 Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~~~~~~~~~~~~~~~~ 514 (538)
||||+|++++++++++.++++|+++|||+. ++++....+..+.+.+|.+++++....| +.+.+.+.+.+
T Consensus 323 AhNp~s~~~~l~~l~~~~~~~~~i~V~g~~---~dkd~~~~~~~l~~~~d~vi~~~~~~~r----~~~~~~i~~~~ 391 (442)
T 1o5z_A 323 AHNPHGAESLVRSLKLYFNGEPLSLVIGIL---DDKNREDILRKYTGIFERVIVTRVPSPR----MKDMNSLVDMA 391 (442)
T ss_dssp CCSHHHHHHHHHHHHHHCTTCCEEEEECCC---TTSCHHHHHGGGTTTCSEEEECCCSSTT----CCCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCCCCEEEEEecC---CCCCHHHHHHHHHhhCCEEEEECCCCCC----CCCHHHHHHHH
Confidence 999999999999999876667899999974 3444444455566679999998866555 55666665544
No 15
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=100.00 E-value=8.1e-43 Score=370.93 Aligned_cols=284 Identities=15% Similarity=0.139 Sum_probs=217.3
Q ss_pred HHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-----C-c--------------------
Q 009279 172 YWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD-----G-S-------------------- 225 (538)
Q Consensus 172 ~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~-----~-~-------------------- 225 (538)
+.+++|+++.++||||||||||||++||+++|+++|++++.+.++++..+.. + .
T Consensus 30 ~~lg~p~~~~~vI~VtGTnGKtTT~~~l~~iL~~~G~~vg~~~sp~l~~~~eri~i~g~~i~~~~~~~~~~~~~~~~~~i 109 (428)
T 1jbw_A 30 HALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERL 109 (428)
T ss_dssp HHTTCGGGSSCEEEEECSSCHHHHHHHHHHHHHHTTCCEEEECSSCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCchhcCcEEEEECCCChHHHHHHHHHHHHHCCCCEEEEeCCccCccceEEEECCEECCHHHHHHHHHHHHHHHHhh
Confidence 5567788888999999999999999999999999999988887765543320 0 0
Q ss_pred --------c--------------ccCCCcEEEEeec---CcceeeccccCcEEEEcCCCccccccCC-CHHHHHHHHHHH
Q 009279 226 --------I--------------FYGGGKNFVLEAD---EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRF 279 (538)
Q Consensus 226 --------~--------------~~~~~~~~VlE~~---~~d~~~~~~~p~vaVITNI~~DHld~~g-s~e~~~~~k~~~ 279 (538)
. .....+++|+|++ +.|... .++|+++|||||++||+|+|| |+|+|+++|.++
T Consensus 110 g~~~~~~~~t~~e~~t~~a~~~f~~~~~d~~VlEvg~~g~~d~t~-~~~p~vaviTnI~~DHld~~g~t~e~ia~~K~~i 188 (428)
T 1jbw_A 110 QQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTN-VITPVVSVLTEVALDHQKLLGHTITAIAKHKAGI 188 (428)
T ss_dssp HHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTTSTTC-SCCCSEEEECCCCSCCHHHHCSSHHHHHHHHGGG
T ss_pred cccccCCCCCHHHHHHHHHHHHHHhCCCCEEEEecCCCccccccc-cCCCCEEEECcCcHhhhhhhCCCHHHHHHHHhcc
Confidence 0 0235689999986 566533 468999999999999999999 999999999877
Q ss_pred hhcccCCcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeE
Q 009279 280 LKQIRVGGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSD 359 (538)
Q Consensus 280 ~~~~~~~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~ 359 (538)
+ ++++.+|+|.||+....++...+... +.++++|+. |+.+...... .++..
T Consensus 189 ~---~~~~~~v~~~dd~~~~~~~~~~a~~~---------------------~~~~~~~g~----~~~~~~~~~~-~~~~~ 239 (428)
T 1jbw_A 189 I---KRGIPVVTGNLVPDAAAVVAAKVATT---------------------GSQWLRFDR----DFSVPKAKLH-GWGQR 239 (428)
T ss_dssp C---CTTCCEEECCCCHHHHHHHHHHHHHH---------------------TCCEEEBTT----TEEEEEEEEC-SSSEE
T ss_pred c---cCCceEEEeCCCHHHHHHHHHHHHHc---------------------CCcEEEeCc----cceeeccccc-cCCce
Confidence 6 56889999999998777665443221 135677763 4544433221 23556
Q ss_pred EEEEECCeeeeEEEeCCCchhHHHHHHHHHHHHHHh-c-----CCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeE
Q 009279 360 YILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTL-I-----GDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCH 433 (538)
Q Consensus 360 f~~~~~~~~~~~~~l~l~G~hnv~NalaAia~a~~l-g-----i~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ 433 (538)
|.+...+.....+.++++|.||++|+++|++++..+ | ++ .+.|+++|++|+ ||||||++.. +..
T Consensus 240 ~~~~~~~~~~~~~~l~l~G~hn~~Na~aAia~~~~l~g~~~~~i~-------~~~i~~~L~~~~-~~gR~e~~~~--~~~ 309 (428)
T 1jbw_A 240 FTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLT-------PQNIRQGLAASH-WPARLEKISD--TPL 309 (428)
T ss_dssp EEEEETTEEEEEEEESCCSTHHHHHHHHHHHHHHHHHHHTTCCCC-------HHHHHHHHHTCC-CTTSSEEEET--TTT
T ss_pred EEEecCCccccccccCCCChhHHHHHHHHHHHHHHHhhccCCCCC-------HHHHHHHHHhCc-CCCceEEecC--CCc
Confidence 776655443236889999999999999999999999 8 76 799999999999 9999999964 457
Q ss_pred EEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHHhccCCEEEE-eccCCCC
Q 009279 434 IYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVV-SAVLVFW 499 (538)
Q Consensus 434 ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~-~~~~~~~ 499 (538)
+|+|+||||+|++++++++++.++ +|+++|||+.+ ++++...+..+.+.+|.+|+ ++++..|
T Consensus 310 viiD~AhNp~s~~a~l~~l~~~~~-~~~i~V~g~~~---~kd~~~~~~~~~~~~d~vi~~~~~~~~r 372 (428)
T 1jbw_A 310 IVIDGAHNPDGINGLITALKQLFS-QPITVIAGILA---DKDYAAMADRLTAAFSTVYLVPVPGTPR 372 (428)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHCS-SCCEEEEECSS---STTHHHHHHHHHHHCSEEEECCCSCC--
T ss_pred EEEECCcCHHHHHHHHHHHHHhcC-CCEEEEEeeCC---CCCHHHHHHHHhhhCCEEEEECCCCCCC
Confidence 899999999999999999998765 78899999853 34444444445556999999 7644444
No 16
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=100.00 E-value=3.6e-41 Score=358.77 Aligned_cols=282 Identities=17% Similarity=0.164 Sum_probs=200.4
Q ss_pred HHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCC------cc-------------------
Q 009279 172 YWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDG------SI------------------- 226 (538)
Q Consensus 172 ~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~~------~~------------------- 226 (538)
+.+++|+.+.|+||||||||||||++||+++|+++|++|+.++++++..+... .+
T Consensus 43 ~~lg~p~~~~~vI~VtGTNGKgSt~~~l~~iL~~~G~~vg~~tSphl~~~neri~i~g~~i~~~~~~~~~~~v~~~~~~~ 122 (437)
T 3nrs_A 43 ERLDLLKPAPKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRGDI 122 (437)
T ss_dssp HHTTCSCSSSEEEEEECSSSHHHHHHHHHHHHHHTTCCEEEECCCCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCccccCCEEEEECCcChHHHHHHHHHHHHHCCCcEEEECCCCcCCcceEEEECCEECCHHHHHHHHHHHHHhhcCC
Confidence 55677777889999999999999999999999999999998888865433211 00
Q ss_pred ----------------ccCCCcEEEEeec---CcceeeccccCcEEEEcCCCccccccCC-CHHHHHHHHHHHhhcccCC
Q 009279 227 ----------------FYGGGKNFVLEAD---EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRVG 286 (538)
Q Consensus 227 ----------------~~~~~~~~VlE~~---~~d~~~~~~~p~vaVITNI~~DHld~~g-s~e~~~~~k~~~~~~~~~~ 286 (538)
...+.+++|+|++ ++|.+ ..++|+++|||||++||+|+|| |+|+|+.+|++++ +++
T Consensus 123 ~~T~fe~~t~~a~~~f~~~~~d~~VlEvGlggrld~t-nii~p~vaVITnI~~DHld~lG~t~e~ia~~Ka~I~---~~~ 198 (437)
T 3nrs_A 123 SLTYFEFGTLSALQLFKQAKLDVVILEVGLGGRLDAT-NIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVF---RGG 198 (437)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCSEEEEECSSSSTTSGG-GGSCCSEEEECCCCCCBCCCTTCSHHHHHHHHGGGC---CTT
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCccccc-cccCCCEEEEcCccHHHHHHhCCcHHHHHHHHHhhc---cCC
Confidence 0235689999986 56653 3478999999999999999999 7999999998776 568
Q ss_pred cEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEee-----eeecCCCCeEEE
Q 009279 287 GHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAES-----VCPNVQGGSDYI 361 (538)
Q Consensus 287 ~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~-----i~~~~~~g~~f~ 361 (538)
+.+|+|.||+. ..+.+.+... +.++++|+.+ .++...+ +... ..+..|.
T Consensus 199 ~~~V~~~d~~~-~~~~~~a~~~----------------------~~~~~~~g~~--~~~~~~~~~~~~~~~~-~~~~~~~ 252 (437)
T 3nrs_A 199 KPAVVGEPDMP-QSIADVAAEL----------------------GAQLYRRDVA--WKFSQQEPFDQQEPVD-QQINGWH 252 (437)
T ss_dssp SEEEECCSSCC-HHHHHHHHHH----------------------TCEEEEBTTT--EEEEC---------------CCEE
T ss_pred CeEEECCccHH-HHHHHHHHHc----------------------CCcEEEeccc--ceeeeccccccccccc-ccCceEE
Confidence 89999988764 2222222211 2466677642 1222110 0011 1133455
Q ss_pred EEECCeeeeEEEeCCC--chhHHHHHHHHHHHHHHhcCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEEECC
Q 009279 362 LCERGRPLAQISLQIP--GVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFA 439 (538)
Q Consensus 362 ~~~~~~~~~~~~l~l~--G~hnv~NalaAia~a~~lgi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D~A 439 (538)
+...+. ..+.++++ |.||+.||++|+++ ..+|++ .+.|+++|++|+ ||||||++.. ++.+|+|||
T Consensus 253 ~~~~~~--~~~~l~l~~~~~~Na~~Alaa~~~-~~lgi~-------~~~i~~gL~~~~-~pGR~e~v~~--~~~vi~D~A 319 (437)
T 3nrs_A 253 WQCGER--QLTGLPVPNVPLANAATALAVLHY-SELPLS-------DEAIRQGLQAAS-LPGRFQVVSE--QPLLILDVA 319 (437)
T ss_dssp EEETTE--EEEEECCCSSCHHHHHHHHHHHHH-HTCCCC-------HHHHHHHHHHCC-CTTSSEEEET--TTEEEECCC
T ss_pred EecCCc--ceeccCCcchhHHHHHHHHHHHHH-hCCCCC-------HHHHHHHHHhCC-CCCceEEEec--CCeEEEECC
Confidence 544332 23556666 78888888888777 456776 789999999999 9999999963 578999999
Q ss_pred CCHHHHHHHHHHHH------hhCCCCeEEEEEccCCCCchHHHHHHHHHHhccCCEEEEeccCCCC
Q 009279 440 HHPTEVRAVLQAAR------QRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFW 499 (538)
Q Consensus 440 hnp~s~~a~l~~l~------~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~ 499 (538)
|||+|+++++++++ +.++.+|+++|||+.+ ++++...+..+.+.+|.+++++....|
T Consensus 320 HNp~a~~all~~l~~~~~~~~~~~~~r~i~V~G~~~---dkd~~~~~~~l~~~~~~v~~~~~~~~r 382 (437)
T 3nrs_A 320 HNPHAARYLVNRLAQVINPVNASKQGKVRAVVGMLS---DKDIAGTLACLSERVDEWYCAPLEGPR 382 (437)
T ss_dssp CSHHHHHHHHHHHHHTC--------CCEEEEECCBT---TBCHHHHHHHHTTTCCEEEECCCSSTT
T ss_pred CCHHHHHHHHHHHHhhcchhhhcCCCCEEEEEeCCC---CCCHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 99999999999998 7656678999999743 444444444455678999999876655
No 17
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=100.00 E-value=1.8e-40 Score=352.31 Aligned_cols=276 Identities=17% Similarity=0.207 Sum_probs=205.8
Q ss_pred HHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCCeEEEeCCCCCCCCC-----C--------------------c
Q 009279 171 DYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPD-----G--------------------S 225 (538)
Q Consensus 171 ~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~v~~~~g~~~~~~~~-----~--------------------~ 225 (538)
.+.+++|+.+.++||||||||||||++||+++|+++|++++.+.++++..++. + +
T Consensus 39 l~~lg~p~~~~~vI~VTGTnGKtTT~~~l~~iL~~~G~~~g~~~s~~l~~~neri~i~g~~i~~~~~~~~~~~v~~~~~~ 118 (422)
T 1w78_A 39 AARLGVLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGD 118 (422)
T ss_dssp HHHHTCSSCSSEEEEEECSSCHHHHHHHHHHHHHHTTCCEEEECCSCSSCGGGGEEETTEECCHHHHHHHHHHHHHHTTT
T ss_pred HHHcCCcccCCcEEEEeCCcChHHHHHHHHHHHHHCCCCEEEECCCCcCcCceEEEECCEECCHHHHHHHHHHHHHHhcc
Confidence 46788888889999999999999999999999999999988887775433321 0 0
Q ss_pred c----------------ccCCCcEEEEeec---CcceeeccccCcEEEEcCCCccccccCC-CHHHHHHHHHHHhhcccC
Q 009279 226 I----------------FYGGGKNFVLEAD---EYDGCFLGLSPSVAVVTNLDWEHVDIFE-DEDAVKSIFRRFLKQIRV 285 (538)
Q Consensus 226 ~----------------~~~~~~~~VlE~~---~~d~~~~~~~p~vaVITNI~~DHld~~g-s~e~~~~~k~~~~~~~~~ 285 (538)
. .....+++|+|++ ..|.. ..++|+++|||||++||+|+|| |+|+|+.+|.+++ ++
T Consensus 119 ~~~t~~e~~t~~a~~~~~~~~~d~~VlEvgl~~~~d~t-~~~~p~vaviTnI~~DHld~~g~t~e~ia~~K~~i~---~~ 194 (422)
T 1w78_A 119 ISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDAT-NIVDADVAVVTSIALDHTDWLGPDRESIGREKAGIF---RS 194 (422)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSSTTSGG-GGSCCSEEEECCCCSCCHHHHCSSHHHHHHHHGGGC---CT
T ss_pred CCCChHHHHHHHHHHHHHHcCCCEEEEecCCCcccccc-cCCCCCEEEECCcChhhhhhhCCCHHHHHHHHHhhc---cC
Confidence 0 0124689999986 45533 3578999999999999999999 8999999887665 56
Q ss_pred CcEEEEcCCCHHHHHHHHHhhhhcCccccCCcccccCcccccCCCCceEEEeeccCCCcceEeeeeecCCCCeEEEEEEC
Q 009279 286 GGHLVICGDSQCARSLLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDYILCER 365 (538)
Q Consensus 286 ~~~~Vln~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~~~~~i~~~~~~g~~f~~~~~ 365 (538)
++.+|+|.|++.. .+.+.+... +.++++|+. |+.... .+..|.+...
T Consensus 195 ~~~~v~~~d~~~~-~~~~~a~~~----------------------~~~~~~~g~----~~~~~~------~~~~~~~~~~ 241 (422)
T 1w78_A 195 EKPAIVGEPEMPS-TIADVAQEK----------------------GALLQRRGV----EWNYSV------TDHDWAFSDA 241 (422)
T ss_dssp TSEEEECCSSCCH-HHHHHHHHH----------------------TCEEEEBTT----TBEEEE------CSSCEEEEET
T ss_pred CCcEEEcCccHHH-HHHHHHHHc----------------------CCceEEeCc----ceeeec------cCceEEEecC
Confidence 7889998877642 222222111 146677763 333221 1223544443
Q ss_pred CeeeeEEEeCCCchhHHHHHHHHHHHHHHh--cCCccCCcccHHHHHHHhccCCCCCCceEEEeeeCCeEEEEECCCCHH
Q 009279 366 GRPLAQISLQIPGVHNVLNSLAVIATVLTL--IGDKRQSHESIACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPT 443 (538)
Q Consensus 366 ~~~~~~~~l~l~G~hnv~NalaAia~a~~l--gi~~~~~~~~~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D~Ahnp~ 443 (538)
+.. . +.++++ .||++|+++|++++..+ |++ .+.|+++|++|+ +|||||++.. +..+|+||||||+
T Consensus 242 ~~~-~-~~l~l~-~hn~~Na~aAia~~~~~~~gi~-------~~~i~~~L~~~~-~~gR~e~~~~--~~~~i~D~Ahnp~ 308 (422)
T 1w78_A 242 HGT-L-ENLPLP-LVPQPNAATALAALRASGLEVS-------ENAIRDGIASAI-LPGRFQIVSE--SPRVIFDVAHNPH 308 (422)
T ss_dssp TEE-E-EEECCC-SSCHHHHHHHHHHHHHHTCCCC-------HHHHHHHHHHCC-CTTSSEEEET--TTEEEEECCCSHH
T ss_pred Ccc-c-ccCCch-HHHHHHHHHHHHHHHHhCCCCC-------HHHHHHHHHhCC-CCceEEEEeC--CCeEEEECCCCHH
Confidence 322 1 678888 99999999999999987 665 799999999999 8999999964 4589999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEEccCCCCchHHHHHHHHHHhccCCEEEEeccCCCC
Q 009279 444 EVRAVLQAARQRFPNKALIAVFQPHTYSRLVVLKDDFANALSEADQVVVSAVLVFW 499 (538)
Q Consensus 444 s~~a~l~~l~~~~~~~r~i~V~g~~~~~r~~~~~~~~~~~~~~~D~vi~~~~~~~~ 499 (538)
|++++++++++..+++|+++|||+.+ ++++...+..+.+.+|.+++++.+.+|
T Consensus 309 s~~~~l~~l~~~~~~~~~i~V~g~~~---~kd~~~~~~~l~~~~d~vi~~~~~~~r 361 (422)
T 1w78_A 309 AAEYLTGRMKALPKNGRVLAVIGMLH---DKDIAGTLAWLKSVVDDWYCAPLEGPR 361 (422)
T ss_dssp HHHHHHHHHHHSCSCSCEEEEECCBT---TSCHHHHHHHHHTTCSEEEECCCCSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeccC---CCCHHHHHHHHHhhCCEEEEECCCCCC
Confidence 99999999998654578999999743 344433333344679999999887666
No 18
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=99.65 E-value=2e-16 Score=145.33 Aligned_cols=90 Identities=29% Similarity=0.508 Sum_probs=60.7
Q ss_pred HHHHHHHhccCCCCCCceEEEeeeCCeEEEEECCCCHHHHHHHHHHHHhhCCCCeEEEEEccCCCC-chHHHHHHHHHHh
Q 009279 406 IACLKLPLSKFMGVSRRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIAVFQPHTYS-RLVVLKDDFANAL 484 (538)
Q Consensus 406 ~~~I~~~L~~f~~~~gR~E~v~~~~g~~ii~D~Ahnp~s~~a~l~~l~~~~~~~r~i~V~g~~~~~-r~~~~~~~~~~~~ 484 (538)
.++|+++|++|+|++||||++...++++||+||||||++++++++++++.++++|+++|||+++++ |++++..++++++
T Consensus 11 ~~~i~~~L~~f~gv~~R~E~i~~~~g~~vi~DyaHnP~si~a~l~al~~~~~~~riivvf~~g~~s~r~k~~~~~~~~~~ 90 (163)
T 3mvn_A 11 VDLGTENLYFQSNAQRRLEVKGVVNNITVYDDFAHHPTAITATIDALRAKVGQQRILAVLEPRSNTMKMGVHKHELATSL 90 (163)
T ss_dssp ----------------CCEEEEEETTEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEECCC---------CHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEecCCCcEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEECCCCcchhhHHHHHHHHHHH
Confidence 467999999999999999999877899999999999999999999999866778999999998876 8888778899888
Q ss_pred ccCCEEEEecc
Q 009279 485 SEADQVVVSAV 495 (538)
Q Consensus 485 ~~~D~vi~~~~ 495 (538)
+.+|.||++++
T Consensus 91 ~~aD~vi~~~~ 101 (163)
T 3mvn_A 91 QDADSVFIYQP 101 (163)
T ss_dssp TTCSEEEEECC
T ss_pred hcCCEEEEECC
Confidence 88999999974
No 19
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=98.67 E-value=1.6e-08 Score=107.66 Aligned_cols=127 Identities=17% Similarity=0.124 Sum_probs=92.9
Q ss_pred hhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHH-CCCeEEeCC-CCCCcCCCCCCCCCCEEEEc
Q 009279 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE-AGANLHIGH-SVSNIQGNDGSRFPNAVVAS 147 (538)
Q Consensus 70 ~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~-~Ga~~~~~~-~~~~~~~~~~~~~~d~vvvs 147 (538)
++++ ++|+|+|.|.+|.+. +++|...|++|.+.|....+.+..+.+ .++.+..+. .+.++. .+|+||++
T Consensus 9 ~l~~--~~vlVvGgG~va~~k-~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~------~~~lVi~a 79 (457)
T 1pjq_A 9 QLRD--RDCLIVGGGDVAERK-ARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLD------SCWLAIAA 79 (457)
T ss_dssp CCBT--CEEEEECCSHHHHHH-HHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGT------TCSEEEEC
T ss_pred ECCC--CEEEEECCCHHHHHH-HHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccC------CccEEEEc
Confidence 3444 679999999999987 566677999999999665555555554 456666553 333343 58999999
Q ss_pred CCCCC-CCHHHHHHHHCCCCe--eeHHHHHHHHh----cCCc-EEEEeCCCCchHH-HHHHHHHHHHc
Q 009279 148 SAIPQ-DNVEILHAKSVGVPI--YKRDYWLAKLT----EKYN-LIAVSGSHGKSTT-ASMLAYVLKAM 206 (538)
Q Consensus 148 p~i~~-~~~~l~~a~~~gi~v--i~~~~~l~~~~----~~~~-vI~VTGTnGKTTT-t~ml~~iL~~~ 206 (538)
|+++. +++....|++.|+++ .+++++..... .+.+ +|+|| |||||+| +.+|.+-|++.
T Consensus 80 t~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIs-T~Gksp~la~~ir~~ie~~ 146 (457)
T 1pjq_A 80 TDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVS-SGGTSPVLARLLREKLESL 146 (457)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEE-CTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEE-CCCCChHHHHHHHHHHHHh
Confidence 99884 677788899999987 66665432211 1234 99999 9999999 88888888764
No 20
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.72 E-value=5.4e-06 Score=81.67 Aligned_cols=128 Identities=9% Similarity=0.007 Sum_probs=75.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhH----HHHH----------------------HC-CC-eEEeCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYM----EGLL----------------------EA-GA-NLHIGH 127 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~----~~~~----------------------~~-Ga-~~~~~~ 127 (538)
++|+|+|.|.+|... +.+|...|++|.+.|....+.+ ..+. +. ++ .++.+.
T Consensus 14 k~VLVVGgG~va~rk-a~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~ 92 (274)
T 1kyq_A 14 KRILLIGGGEVGLTR-LYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYIRSD 92 (274)
T ss_dssp CEEEEEEESHHHHHH-HHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEECSS
T ss_pred CEEEEECCcHHHHHH-HHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEEcCC
Confidence 679999999999986 5677789999999885432111 1221 22 23 444332
Q ss_pred -CCCCcCCCCCCCCCCEEEEcCCCC-CCCHHHHHHHHC---CCCe--eeHHHHHH--HH--hcCCc--EEEEeCCCCchH
Q 009279 128 -SVSNIQGNDGSRFPNAVVASSAIP-QDNVEILHAKSV---GVPI--YKRDYWLA--KL--TEKYN--LIAVSGSHGKST 194 (538)
Q Consensus 128 -~~~~~~~~~~~~~~d~vvvsp~i~-~~~~~l~~a~~~---gi~v--i~~~~~l~--~~--~~~~~--vI~VTGTnGKTT 194 (538)
.+.++........+|+||++++.+ .+.+....|++. +++| ...+++.. -| ....+ +|+|| |||||+
T Consensus 93 ~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~f~~Pa~~~~g~~l~IaIS-T~Gksp 171 (274)
T 1kyq_A 93 FKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCDFYFGANLEIGDRLQILIS-TNGLSP 171 (274)
T ss_dssp CCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBSEECCEEEEETTTEEEEEE-ESSSCH
T ss_pred CCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCeeEeeeEEEeCCCEEEEEE-CCCCCc
Confidence 222221000001578999999876 445567777877 8777 55444322 01 11234 99999 999997
Q ss_pred HH-HHHHHHHHH
Q 009279 195 TA-SMLAYVLKA 205 (538)
Q Consensus 195 Tt-~ml~~iL~~ 205 (538)
+. ..|..-++.
T Consensus 172 ~lA~~ir~~ie~ 183 (274)
T 1kyq_A 172 RFGALVRDEIRN 183 (274)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 63 444444443
No 21
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.71 E-value=0.0001 Score=70.37 Aligned_cols=126 Identities=13% Similarity=0.069 Sum_probs=83.8
Q ss_pred hhhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCC-CeEEeCC-CCCCcCCCCCCCCCCEE
Q 009279 67 CIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG-ANLHIGH-SVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 67 ~~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~G-a~~~~~~-~~~~~~~~~~~~~~d~v 144 (538)
.+.++.+ ++|+|||.|..|... +++|...|++|.+.+....+.+..+.+.| +.+.... .+.++. .+|+|
T Consensus 25 ifl~L~g--k~VLVVGgG~va~~k-a~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~------~adLV 95 (223)
T 3dfz_A 25 VMLDLKG--RSVLVVGGGTIATRR-IKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLL------NVFFI 95 (223)
T ss_dssp EEECCTT--CCEEEECCSHHHHHH-HHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSS------SCSEE
T ss_pred cEEEcCC--CEEEEECCCHHHHHH-HHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhC------CCCEE
Confidence 3345555 569999999999987 56666789999999866555566666554 6655442 233333 68999
Q ss_pred EEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHh-----------cCCcEEEEeCCCCch-HHHHHHHHHHHHc
Q 009279 145 VASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLT-----------EKYNLIAVSGSHGKS-TTASMLAYVLKAM 206 (538)
Q Consensus 145 vvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~-----------~~~~vI~VTGTnGKT-TTt~ml~~iL~~~ 206 (538)
|.+++.+..+..+.++.+.|++|-.. ..|. ...-+|+|+ |+||+ ..+..|..-|++.
T Consensus 96 IaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg~l~iaIS-T~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 96 VVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRGRLSLAIS-TDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp EECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEE-CTTSCHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeCCEEEEEE-CCCCCcHHHHHHHHHHHHH
Confidence 99999888888777665578876432 2221 122368885 99997 5566666666553
No 22
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.62 E-value=0.094 Score=51.91 Aligned_cols=115 Identities=20% Similarity=0.155 Sum_probs=68.3
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
..+|.|||.|.-|.+ +|..|+..|++|.++|.+. +.++.+.+.|+........+-+ ..+|+|++... +.
T Consensus 7 ~~~I~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~-~~~~~~~~~g~~~~~~~~~e~~------~~aDvvi~~vp---~~ 75 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMG-AARSCLRAGLSTWGADLNP-QACANLLAEGACGAAASAREFA------GVVDALVILVV---NA 75 (303)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHHTTCSEEESSSTTTT------TTCSEEEECCS---SH
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCCCeEEEEECCH-HHHHHHHHcCCccccCCHHHHH------hcCCEEEEECC---CH
Confidence 357999999999986 5777888999999998542 3455677778765222221112 25799998752 22
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
..+..... +.. ++... .++. .+.|.-|+.+..++.-+...+.+.|.
T Consensus 76 ~~~~~v~~-~~~-----~l~~~-l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 76 AQVRQVLF-GED-----GVAHL-MKPG-SAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp HHHHHHHC---C-----CCGGG-SCTT-CEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHh-Chh-----hHHhh-CCCC-CEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 22322210 000 00111 1122 34455566788888888888887764
No 23
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.70 E-value=0.14 Score=50.59 Aligned_cols=112 Identities=21% Similarity=0.202 Sum_probs=63.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.||.|||+|.-|.+ +|.-|.+.|++|.++|.+.. -.+.+.+.|+...- ...+.. ...|+|+... ++..
T Consensus 6 ~kIgfIGLG~MG~~-mA~~L~~~G~~V~v~dr~~~-~~~~l~~~G~~~~~--s~~e~~-----~~~dvvi~~l---~~~~ 73 (297)
T 4gbj_A 6 EKIAFLGLGNLGTP-IAEILLEAGYELVVWNRTAS-KAEPLTKLGATVVE--NAIDAI-----TPGGIVFSVL---ADDA 73 (297)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTTCEEEEC--------CTTTTTTCEECS--SGGGGC-----CTTCEEEECC---SSHH
T ss_pred CcEEEEecHHHHHH-HHHHHHHCCCeEEEEeCCHH-HHHHHHHcCCeEeC--CHHHHH-----hcCCceeeec---cchh
Confidence 46999999999986 57777889999999996533 23445567876532 222221 2578888764 2333
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.+.... . ...+... .+..+|--.+|. --.++.-++..+++.|..
T Consensus 74 ~~~~v~-------~-~~~~~~~-~~~~iiid~sT~-~p~~~~~~~~~~~~~g~~ 117 (297)
T 4gbj_A 74 AVEELF-------S-MELVEKL-GKDGVHVSMSTI-SPETSRQLAQVHEWYGAH 117 (297)
T ss_dssp HHHHHS-------C-HHHHHHH-CTTCEEEECSCC-CHHHHHHHHHHHHHTTCE
T ss_pred hHHHHH-------H-HHHHhhc-CCCeEEEECCCC-ChHHHHHHHHHHHhcCCc
Confidence 332221 0 1233333 233455445555 455566667788888864
No 24
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.37 E-value=0.14 Score=51.08 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=66.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecCCCC------hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWS------SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~~~~------~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||+|.-|.+ +|..|+..| ++|.++|.+.. +..+.+.+.|+ ... ...+-+. ..|+|++..
T Consensus 25 m~IgvIG~G~mG~~-lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~-s~~e~~~------~aDvVi~av 95 (317)
T 4ezb_A 25 TTIAFIGFGEAAQS-IAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPL-DDVAGIA------CADVVLSLV 95 (317)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEE-SSGGGGG------GCSEEEECC
T ss_pred CeEEEECccHHHHH-HHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCC-CHHHHHh------cCCEEEEec
Confidence 46999999999986 577788899 99999996542 34455667787 210 1111122 479988865
Q ss_pred CCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 149 AIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 149 ~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
. +. .....+. ++.... ++ ..+-|.-|+.+..|+.-++..+++.|..
T Consensus 96 p--~~-~~~~~~~----------~i~~~l-~~-~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 96 V--GA-ATKAVAA----------SAAPHL-SD-EAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp C--GG-GHHHHHH----------HHGGGC-CT-TCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred C--CH-HHHHHHH----------HHHhhc-CC-CCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 2 22 2222111 122111 12 2344555677888888888889887753
No 25
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.14 E-value=0.047 Score=45.16 Aligned_cols=70 Identities=19% Similarity=0.131 Sum_probs=44.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecCCCChhHHHHHHCCCeEEeCCCC--CCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWSSYMEGLLEAGANLHIGHSV--SNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~~~~~d~vvvsp~ 149 (538)
++|+|+|.|..|.+. +..|...| ++|.+.|.+. +..+.+.+.|+........ ..+.. ....+|+||...+
T Consensus 6 ~~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMI-AALLKTSSNYSVTVADHDL-AALAVLNRMGVATKQVDAKDEAGLAK--ALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHCSSEEEEEEESCH-HHHHHHHTTTCEEEECCTTCHHHHHH--HTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHH-HHHHHhCCCceEEEEeCCH-HHHHHHHhCCCcEEEecCCCHHHHHH--HHcCCCEEEECCC
Confidence 468999999999975 56667789 9999998543 2234444567776554221 11100 0125788888764
No 26
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.76 E-value=0.46 Score=40.98 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=48.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCC-C-cCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS-N-IQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~-~-~~~~~~~~~~d~vvvsp~ 149 (538)
++|.|+|.|..|... |..|...|++|.+.|.+. +.++.+.+.|+.++.+.... + +.. .+...+|.+|+..+
T Consensus 8 ~~viIiG~G~~G~~l-a~~L~~~g~~v~vid~~~-~~~~~~~~~g~~~i~gd~~~~~~l~~-a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLL-GEKLLASDIPLVVIETSR-TRVDELRERGVRAVLGNAANEEIMQL-AHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHH-HHHHHHTTCCEEEEESCH-HHHHHHHHTTCEEEESCTTSHHHHHH-TTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCCEEEEECCH-HHHHHHHHcCCCEEECCCCCHHHHHh-cCcccCCEEEEECC
Confidence 468899999999974 778888999999999643 34566777899887764321 1 110 01125788887643
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.74 E-value=0.23 Score=48.56 Aligned_cols=113 Identities=20% Similarity=0.109 Sum_probs=66.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|..|.+ +|..|+..|++|.++|.+.. ..+.+.+.|+...- +..+.. ..+|+|++... +..
T Consensus 2 ~~i~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~~-~~~~~~~~g~~~~~--~~~~~~-----~~aDvvi~~vp---~~~ 69 (287)
T 3pef_A 2 QKFGFIGLGIMGSA-MAKNLVKAGCSVTIWNRSPE-KAEELAALGAERAA--TPCEVV-----ESCPVTFAMLA---DPA 69 (287)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSGG-GGHHHHHTTCEECS--SHHHHH-----HHCSEEEECCS---SHH
T ss_pred CEEEEEeecHHHHH-HHHHHHHCCCeEEEEcCCHH-HHHHHHHCCCeecC--CHHHHH-----hcCCEEEEEcC---CHH
Confidence 46899999999987 47777889999999986533 35566677875422 111111 14788888642 222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+..... +. .++.... ++..+| |.-|+.+..++.-+...+++.|.
T Consensus 70 ~~~~v~~-~~-----~~l~~~l-~~~~~v-i~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 70 AAEEVCF-GK-----HGVLEGI-GEGRGY-VDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HHHHHHH-ST-----TCHHHHC-CTTCEE-EECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHc-Cc-----chHhhcC-CCCCEE-EeCCCCCHHHHHHHHHHHHHhCC
Confidence 2322210 00 0111222 223344 44467777787888888888775
No 28
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.53 E-value=0.4 Score=51.02 Aligned_cols=114 Identities=15% Similarity=0.093 Sum_probs=68.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHH-----CCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE-----AGANLHIGHSVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~-----~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+. +.++.+.+ .|+.. ..+..++.. ..+.+|+|++..
T Consensus 11 ~~IgvIGlG~MG~~-lA~~La~~G~~V~v~dr~~-~~~~~l~~~~~~~~gi~~--~~s~~e~v~--~l~~aDvVil~V-- 82 (497)
T 2p4q_A 11 ADFGLIGLAVMGQN-LILNAADHGFTVCAYNRTQ-SKVDHFLANEAKGKSIIG--ATSIEDFIS--KLKRPRKVMLLV-- 82 (497)
T ss_dssp CSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSS-HHHHHHHHTTTTTSSEEC--CSSHHHHHH--TSCSSCEEEECC--
T ss_pred CCEEEEeeHHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHcccccCCCeEE--eCCHHHHHh--cCCCCCEEEEEc--
Confidence 45899999999986 5788888999999999653 33455555 34332 222211110 001378888864
Q ss_pred CCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 151 PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 151 ~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
+....+....+ ++. +.-....|.|.++||...++.-+.+.|...|..
T Consensus 83 -p~~~~v~~vl~---------~l~--~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 83 -KAGAPVDALIN---------QIV--PLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp -CSSHHHHHHHH---------HHG--GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred -CChHHHHHHHH---------HHH--HhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 22222322210 111 111223677889999998888888888887754
No 29
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.52 E-value=0.32 Score=48.49 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=67.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|..|.+ +|..|+..|++|.++|.+. +..+.+.+.|+.... +..+.. ..+|+|++.. ++..
T Consensus 32 ~~I~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~-~~~~~l~~~g~~~~~--~~~e~~-----~~aDvVi~~v---p~~~ 99 (320)
T 4dll_A 32 RKITFLGTGSMGLP-MARRLCEAGYALQVWNRTP-ARAASLAALGATIHE--QARAAA-----RDADIVVSML---ENGA 99 (320)
T ss_dssp SEEEEECCTTTHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHTTTCEEES--SHHHHH-----TTCSEEEECC---SSHH
T ss_pred CEEEEECccHHHHH-HHHHHHhCCCeEEEEcCCH-HHHHHHHHCCCEeeC--CHHHHH-----hcCCEEEEEC---CCHH
Confidence 47999999999986 5777788999999998543 234556667876532 111111 1578988865 2222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.+...... . .++... .+ ..+.|.-|+++-.++.-+...++..|..
T Consensus 100 ~~~~v~~~-~------~~~~~l-~~-~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 100 VVQDVLFA-Q------GVAAAM-KP-GSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp HHHHHHTT-T------CHHHHC-CT-TCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHcc-h------hHHhhC-CC-CCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 33322110 0 112222 22 2344555667778888888888887753
No 30
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.41 E-value=0.26 Score=48.46 Aligned_cols=109 Identities=23% Similarity=0.200 Sum_probs=67.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+.. .++.+.+.|+... .+..+.. . +|+|++.. ++..
T Consensus 16 ~~I~vIG~G~mG~~-~A~~l~~~G~~V~~~dr~~~-~~~~~~~~g~~~~--~~~~~~~-----~-aDvvi~~v---p~~~ 82 (296)
T 3qha_A 16 LKLGYIGLGNMGAP-MATRMTEWPGGVTVYDIRIE-AMTPLAEAGATLA--DSVADVA-----A-ADLIHITV---LDDA 82 (296)
T ss_dssp CCEEEECCSTTHHH-HHHHHTTSTTCEEEECSSTT-TSHHHHHTTCEEC--SSHHHHT-----T-SSEEEECC---SSHH
T ss_pred CeEEEECcCHHHHH-HHHHHHHCCCeEEEEeCCHH-HHHHHHHCCCEEc--CCHHHHH-----h-CCEEEEEC---CChH
Confidence 46999999999986 57888889999999996543 3456667787642 2222221 2 78888864 2222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+.... .++... .+. ..+.|.-|+++..++.-+...+.+.|.
T Consensus 83 ~~~~v~---------~~l~~~-l~~-g~ivv~~st~~~~~~~~~~~~~~~~g~ 124 (296)
T 3qha_A 83 QVREVV---------GELAGH-AKP-GTVIAIHSTISDTTAVELARDLKARDI 124 (296)
T ss_dssp HHHHHH---------HHHHTT-CCT-TCEEEECSCCCHHHHHHHHHHHGGGTC
T ss_pred HHHHHH---------HHHHHh-cCC-CCEEEEeCCCCHHHHHHHHHHHHHcCC
Confidence 222211 011111 112 344566667778888888888877765
No 31
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.34 E-value=0.88 Score=48.05 Aligned_cols=117 Identities=23% Similarity=0.193 Sum_probs=71.3
Q ss_pred CCceEEEEeechhhHHHHHHHHHhC-CC-cEEEecCCCCh---hHHHHHH---------------------CCCeEEeCC
Q 009279 74 RKGWIHFVGIGGSGLSALAKLALKQ-GF-EVSGSDLVWSS---YMEGLLE---------------------AGANLHIGH 127 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l~~~-G~-~v~g~D~~~~~---~~~~~~~---------------------~Ga~~~~~~ 127 (538)
+..+|.|||+|.-|.+ +|..|+.. |+ +|.++|.+... -++.+.+ .|. +....
T Consensus 17 ~~mkIaVIGlG~mG~~-lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~-l~~tt 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIP-AAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGK-FECTP 94 (478)
T ss_dssp SCCEEEEECCSTTHHH-HHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTC-EEEES
T ss_pred CCCEEEEECcCHHHHH-HHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCC-eEEeC
Confidence 3457999999999986 57777889 99 99999976540 1222211 222 11222
Q ss_pred CCCCcCCCCCCCCCCEEEEcCCCCC--------CCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHH
Q 009279 128 SVSNIQGNDGSRFPNAVVASSAIPQ--------DNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASML 199 (538)
Q Consensus 128 ~~~~~~~~~~~~~~d~vvvsp~i~~--------~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml 199 (538)
+.+.+. .+|+|++...-|. +-..+..+. +-+....+...+|...-|--=+||..+.
T Consensus 95 d~ea~~------~aDvViiaVptp~~~~~~~~~dl~~v~~~~----------~~i~~~l~~g~iVV~~STv~pgtt~~v~ 158 (478)
T 3g79_A 95 DFSRIS------ELDAVTLAIQTPFANPKDLEPDFSALIDGI----------RNVGKYLKPGMLVVLESTITPGTTEGMA 158 (478)
T ss_dssp CGGGGG------GCSEEEECCCCCCCSSCCSSCCCHHHHHHH----------HHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred cHHHHh------cCCEEEEecCCchhccCCccccHHHHHHHH----------HHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence 222222 5799998765442 223333331 1222222345677788899999999998
Q ss_pred HHHH-HHcCC
Q 009279 200 AYVL-KAMGD 208 (538)
Q Consensus 200 ~~iL-~~~G~ 208 (538)
..++ +..|.
T Consensus 159 ~~ile~~~g~ 168 (478)
T 3g79_A 159 KQILEEESGL 168 (478)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhcCC
Confidence 8899 45664
No 32
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.33 E-value=0.36 Score=48.07 Aligned_cols=108 Identities=20% Similarity=0.167 Sum_probs=62.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChhHHHHHHCCCeEEeCCCCCC-cCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSYMEGLLEAGANLHIGHSVSN-IQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~-~~~~~~~~~~d~vvvsp~i~~ 152 (538)
++|.|||.|..|.+ +|..|+..|+ +|.++|.+. +..+.+.+.|+......+... .. ..+|+||+.. |+
T Consensus 34 ~kI~IIG~G~mG~s-lA~~l~~~G~~~~V~~~dr~~-~~~~~a~~~G~~~~~~~~~~~~~~-----~~aDvVilav--p~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGS-FAKSLRRSGFKGKIYGYDINP-ESISKAVDLGIIDEGTTSIAKVED-----FSPDFVMLSS--PV 104 (314)
T ss_dssp SEEEEESCSHHHHH-HHHHHHHTTCCSEEEEECSCH-HHHHHHHHTTSCSEEESCTTGGGG-----GCCSEEEECS--CG
T ss_pred CEEEEEeeCHHHHH-HHHHHHhCCCCCEEEEEECCH-HHHHHHHHCCCcchhcCCHHHHhh-----ccCCEEEEeC--CH
Confidence 56999999999987 5788888999 999999543 234566777873212222222 11 2589999864 33
Q ss_pred CCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 153 DNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 153 ~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
.. ..... .++.... +.-.+| +.=+..|+.+...+...+..
T Consensus 105 ~~--~~~vl---------~~l~~~l-~~~~iv-~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 105 RT--FREIA---------KKLSYIL-SEDATV-TDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp GG--HHHHH---------HHHHHHS-CTTCEE-EECCSCCTHHHHHHHHHHGG
T ss_pred HH--HHHHH---------HHHhhcc-CCCcEE-EECCCCcHHHHHHHHHhcCC
Confidence 32 11110 1222222 222333 33355677777777777743
No 33
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.15 E-value=0.4 Score=47.06 Aligned_cols=114 Identities=23% Similarity=0.220 Sum_probs=67.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|.-|.+ +|..|+..|++|.++|.+. +..+.+.+.|+...- +..+.. ..+|+|++.. ++..
T Consensus 4 ~~I~iiG~G~mG~~-~a~~l~~~G~~V~~~d~~~-~~~~~~~~~g~~~~~--~~~~~~-----~~aDvvi~~v---p~~~ 71 (302)
T 2h78_A 4 KQIAFIGLGHMGAP-MATNLLKAGYLLNVFDLVQ-SAVDGLVAAGASAAR--SARDAV-----QGADVVISML---PASQ 71 (302)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTTCEEEEECSSH-HHHHHHHHTTCEECS--SHHHHH-----TTCSEEEECC---SCHH
T ss_pred CEEEEEeecHHHHH-HHHHHHhCCCeEEEEcCCH-HHHHHHHHCCCeEcC--CHHHHH-----hCCCeEEEEC---CCHH
Confidence 46999999999986 5777788999999998542 345566777876421 211111 1479998864 2222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.+.......- ++.... .+. .+.|.=|+++..++.-+...+...|..
T Consensus 72 ~~~~v~~~~~------~~~~~l-~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~ 117 (302)
T 2h78_A 72 HVEGLYLDDD------GLLAHI-APG-TLVLECSTIAPTSARKIHAAARERGLA 117 (302)
T ss_dssp HHHHHHHSSS------CGGGSS-CSS-CEEEECSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCch------hHHhcC-CCC-cEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2322211000 001111 122 344555677888888888888887764
No 34
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.08 E-value=0.35 Score=51.25 Aligned_cols=116 Identities=15% Similarity=0.123 Sum_probs=68.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCC---CeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG---ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~G---a~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+. +.++.+.+.| ..+....+..++.. ..+.+|+|++.. |
T Consensus 5 ~kIgiIGlG~MG~~-lA~~L~~~G~~V~v~dr~~-~~~~~l~~~g~~g~~i~~~~s~~e~v~--~l~~aDvVil~V--p- 77 (484)
T 4gwg_A 5 ADIALIGLAVMGQN-LILNMNDHGFVVCAFNRTV-SKVDDFLANEAKGTKVVGAQSLKEMVS--KLKKPRRIILLV--K- 77 (484)
T ss_dssp BSEEEECCSHHHHH-HHHHHHHTTCCEEEECSST-HHHHHHHHTTTTTSSCEECSSHHHHHH--TBCSSCEEEECS--C-
T ss_pred CEEEEEChhHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHhcccCCCceeccCCHHHHHh--hccCCCEEEEec--C-
Confidence 46999999999986 5788888999999999654 3455565553 33322222221110 001478888864 2
Q ss_pred CCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 153 DNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 153 ~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
....+.... .++.. .-....|-|.++|++-.++.-+...|.+.|..
T Consensus 78 ~~~~v~~vl---------~~l~~--~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~ 123 (484)
T 4gwg_A 78 AGQAVDDFI---------EKLVP--LLDTGDIIIDGGNSEYRDTTRRCRDLKAKGIL 123 (484)
T ss_dssp SSHHHHHHH---------HHHGG--GCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred ChHHHHHHH---------HHHHH--hcCCCCEEEEcCCCCchHHHHHHHHHHhhccc
Confidence 222222211 01111 11234677889999977777777788888764
No 35
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=93.06 E-value=0.33 Score=48.02 Aligned_cols=114 Identities=23% Similarity=0.225 Sum_probs=66.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|.-|.+ +|+-|.+.|++|.++|.+. +-.+.+.+.|+...- .+.+.. ...|+|+... ++.+
T Consensus 4 ~kIgfIGlG~MG~~-mA~~L~~~G~~v~v~dr~~-~~~~~l~~~Ga~~a~--s~~e~~-----~~~dvv~~~l---~~~~ 71 (300)
T 3obb_A 4 KQIAFIGLGHMGAP-MATNLLKAGYLLNVFDLVQ-SAVDGLVAAGASAAR--SARDAV-----QGADVVISML---PASQ 71 (300)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTTCEEEEECSSH-HHHHHHHHTTCEECS--SHHHHH-----TTCSEEEECC---SCHH
T ss_pred CEEEEeeehHHHHH-HHHHHHhCCCeEEEEcCCH-HHHHHHHHcCCEEcC--CHHHHH-----hcCCceeecC---CchH
Confidence 46999999999986 5677778999999999643 345677888987632 222211 1578888864 3444
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.+.......-. ++.. .++..+|--++| .--.++.-++..+++.|..
T Consensus 72 ~v~~V~~~~~g------~~~~-~~~g~iiId~sT-~~p~~~~~~a~~~~~~G~~ 117 (300)
T 3obb_A 72 HVEGLYLDDDG------LLAH-IAPGTLVLECST-IAPTSARKIHAAARERGLA 117 (300)
T ss_dssp HHHHHHHSSSS------STTS-CCC-CEEEECSC-CCHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHhchhh------hhhc-CCCCCEEEECCC-CCHHHHHHHHHHHHHcCCE
Confidence 44333110000 0000 112234444455 4555556667788888853
No 36
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.85 E-value=0.34 Score=51.33 Aligned_cols=114 Identities=16% Similarity=0.010 Sum_probs=68.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHC----CCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA----GANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~----Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
++|.|||+|.-|.+ +|..|+..|++|.++|.+.. .++.+.+. |+.. ..+..++.. ..+.+|+|++.. |
T Consensus 16 ~~IgvIGlG~MG~~-lA~~La~~G~~V~v~~r~~~-~~~~l~~~~~~~gi~~--~~s~~e~v~--~l~~aDvVil~V--p 87 (480)
T 2zyd_A 16 QQIGVVGMAVMGRN-LALNIESRGYTVSIFNRSRE-KTEEVIAENPGKKLVP--YYTVKEFVE--SLETPRRILLMV--K 87 (480)
T ss_dssp BSEEEECCSHHHHH-HHHHHHTTTCCEEEECSSHH-HHHHHHHHSTTSCEEE--CSSHHHHHH--TBCSSCEEEECS--C
T ss_pred CeEEEEccHHHHHH-HHHHHHhCCCeEEEEeCCHH-HHHHHHhhCCCCCeEE--eCCHHHHHh--CCCCCCEEEEEC--C
Confidence 56999999999986 67888889999999985432 33444443 5432 222211110 001378888864 2
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
+... +....+ ++. +.-....|-|..+||+..++..+.+.|...|..
T Consensus 88 ~~~~-v~~vl~---------~l~--~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 88 AGAG-TDAAID---------SLK--PYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp SSSH-HHHHHH---------HHG--GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHH-HHHHHH---------HHH--hhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 3222 221110 111 111223577899999988888788999887754
No 37
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.70 E-value=0.33 Score=49.37 Aligned_cols=117 Identities=17% Similarity=0.101 Sum_probs=69.8
Q ss_pred cCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 72 KNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 72 ~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
..+..+|.|||+|.-|.+ +|..|+..|++|.++|.+. +.++.+.+.|+... .+..++.. ..+.+|+|++...
T Consensus 19 Mm~~mkIgiIGlG~mG~~-~A~~L~~~G~~V~v~dr~~-~~~~~l~~~g~~~~--~s~~e~~~--~a~~~DvVi~~vp-- 90 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGAD-MVRRLRKGGHECVVYDLNV-NAVQALEREGIAGA--RSIEEFCA--KLVKPRVVWLMVP-- 90 (358)
T ss_dssp ---CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHTTTCBCC--SSHHHHHH--HSCSSCEEEECSC--
T ss_pred hhcCCEEEEECchHHHHH-HHHHHHhCCCEEEEEeCCH-HHHHHHHHCCCEEe--CCHHHHHh--cCCCCCEEEEeCC--
Confidence 333467999999999986 5778888999999999543 23455666676542 11111100 0013488888642
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
+. .+....+ .+.. .-....|.|..|+++..++.-++..|...|..
T Consensus 91 ~~--~v~~vl~---------~l~~--~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~ 135 (358)
T 4e21_A 91 AA--VVDSMLQ---------RMTP--LLAANDIVIDGGNSHYQDDIRRADQMRAQGIT 135 (358)
T ss_dssp GG--GHHHHHH---------HHGG--GCCTTCEEEECSSCCHHHHHHHHHHHHTTTCE
T ss_pred HH--HHHHHHH---------HHHh--hCCCCCEEEeCCCCChHHHHHHHHHHHHCCCE
Confidence 22 2222210 1111 11224677888999988888888888887754
No 38
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.32 E-value=0.38 Score=41.32 Aligned_cols=71 Identities=17% Similarity=0.095 Sum_probs=48.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCC--CcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS--NIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~--~~~~~~~~~~~d~vvvsp~ 149 (538)
++|+|+|.|..|.+ ++..|...|++|.+.|.++ +..+.+.+.|..++.++... .+.. .....+|.+|+..+
T Consensus 7 ~~v~I~G~G~iG~~-la~~L~~~g~~V~~id~~~-~~~~~~~~~~~~~~~gd~~~~~~l~~-~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVG-LVRELTAAGKKVLAVDKSK-EKIELLEDEGFDAVIADPTDESFYRS-LDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHH-HHHHHHHTTCCEEEEESCH-HHHHHHHHTTCEEEECCTTCHHHHHH-SCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCeEEEEECCH-HHHHHHHHCCCcEEECCCCCHHHHHh-CCcccCCEEEEecC
Confidence 45899999999997 4777888999999999543 34556777888877663321 1110 01125788888765
No 39
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.25 E-value=0.81 Score=44.27 Aligned_cols=108 Identities=20% Similarity=0.182 Sum_probs=60.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCC-CCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSR-FPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~-~~d~vvvsp~i~~ 152 (538)
++|.|||.|..|.+ +|..|+..|+ +|.++|.+. +..+.+.+.|+......+.... .. .+|+|++.. |+
T Consensus 2 ~~I~iIG~G~mG~~-~a~~l~~~g~~~~V~~~d~~~-~~~~~~~~~g~~~~~~~~~~~~-----~~~~aDvVilav--p~ 72 (281)
T 2g5c_A 2 QNVLIVGVGFMGGS-FAKSLRRSGFKGKIYGYDINP-ESISKAVDLGIIDEGTTSIAKV-----EDFSPDFVMLSS--PV 72 (281)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHTTCCSEEEEECSCH-HHHHHHHHTTSCSEEESCGGGG-----GGTCCSEEEECS--CH
T ss_pred cEEEEEecCHHHHH-HHHHHHhcCCCcEEEEEeCCH-HHHHHHHHCCCcccccCCHHHH-----hcCCCCEEEEcC--CH
Confidence 36899999999986 5777778898 899998542 2344566677642111122111 12 479998864 22
Q ss_pred CCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 153 DNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 153 ~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
. ...... .++.... +...+|.. -+++|..+...+.+.+..
T Consensus 73 ~--~~~~v~---------~~l~~~l-~~~~iv~~-~~~~~~~~~~~l~~~l~~ 112 (281)
T 2g5c_A 73 R--TFREIA---------KKLSYIL-SEDATVTD-QGSVKGKLVYDLENILGK 112 (281)
T ss_dssp H--HHHHHH---------HHHHHHS-CTTCEEEE-CCSCCTHHHHHHHHHHGG
T ss_pred H--HHHHHH---------HHHHhhC-CCCcEEEE-CCCCcHHHHHHHHHhccc
Confidence 2 111110 0122111 22234433 346677777777777754
No 40
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.85 E-value=0.63 Score=48.49 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=65.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCe------------------EEeCCCCC-CcCCCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGAN------------------LHIGHSVS-NIQGNDG 137 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~------------------~~~~~~~~-~~~~~~~ 137 (538)
+|.|||.|..|.+ +|..|+..|++|.+.|.+.. .++.+.+.+.. +....+.. .+.
T Consensus 2 kI~VIG~G~vG~~-~A~~la~~G~~V~~~d~~~~-~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~---- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAV-CAGCLSARGHEVIGVDVSST-KIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL---- 75 (436)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTTCEEEEECSCHH-HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH----
T ss_pred EEEEECCCHHHHH-HHHHHHHCCCEEEEEECCHH-HHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc----
Confidence 5899999999987 46777889999999996422 23333332211 11111111 111
Q ss_pred CCCCCEEEEcCCCCCC---CH---HHHHHHHCCCCeeeHHHHHHHHhcC---CcEEEEeCCCCchHHHHHHHHHHHHc-C
Q 009279 138 SRFPNAVVASSAIPQD---NV---EILHAKSVGVPIYKRDYWLAKLTEK---YNLIAVSGSHGKSTTASMLAYVLKAM-G 207 (538)
Q Consensus 138 ~~~~d~vvvsp~i~~~---~~---~l~~a~~~gi~vi~~~~~l~~~~~~---~~vI~VTGTnGKTTTt~ml~~iL~~~-G 207 (538)
.+|+|++...-|.. .+ .+..+. +-+....+. ..+|..+.|++=+||...+..+|.+. |
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~----------~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g 143 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVC----------REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSG 143 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHH----------HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHS
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHH----------HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcC
Confidence 47899887643321 11 122221 112222233 45666677888888888899999874 5
Q ss_pred C
Q 009279 208 D 208 (538)
Q Consensus 208 ~ 208 (538)
.
T Consensus 144 ~ 144 (436)
T 1mv8_A 144 K 144 (436)
T ss_dssp C
T ss_pred c
Confidence 4
No 41
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.76 E-value=1.3 Score=46.85 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=67.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHH-----CCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE-----AGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~-----~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
+|.|||+|.-|.+ +|..|+..|++|.++|.+. +.++.+.+ .|+.. ..+..++.. ....+|+|++.. |
T Consensus 4 ~IgvIG~G~mG~~-lA~~La~~G~~V~v~dr~~-~~~~~l~~~~~~g~gi~~--~~~~~e~v~--~l~~aDvVilaV--p 75 (482)
T 2pgd_A 4 DIALIGLAVMGQN-LILNMNDHGFVVCAFNRTV-SKVDDFLANEAKGTKVLG--AHSLEEMVS--KLKKPRRIILLV--K 75 (482)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTTCCEEEECSST-HHHHHHHHTTTTTSSCEE--CSSHHHHHH--HBCSSCEEEECS--C
T ss_pred eEEEEChHHHHHH-HHHHHHHCCCeEEEEeCCH-HHHHHHHhccccCCCeEE--eCCHHHHHh--hccCCCEEEEeC--C
Confidence 5899999999986 5777888999999998543 34455555 45433 222211100 001478888864 2
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
....+....+ ++.... ....|-|..+||...++.-+...+...|..
T Consensus 76 -~~~~v~~vl~---------~l~~~l--~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 76 -AGQAVDNFIE---------KLVPLL--DIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp -TTHHHHHHHH---------HHHHHC--CTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred -ChHHHHHHHH---------HHHhhc--CCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 2222322210 222111 223466789999998777778888877753
No 42
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.62 E-value=1 Score=40.42 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=46.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhC-CCcEEEecCCCChhHHHHHHCCCeEEeCCCCC--CcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ-GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS--NIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~-G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~--~~~~~~~~~~~d~vvvsp 148 (538)
.+|+|+|.|..|... +..|... |++|.+.|.+. +..+.+.+.|+.++.++... .+........+|.||+..
T Consensus 40 ~~v~IiG~G~~G~~~-a~~L~~~~g~~V~vid~~~-~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 40 AQVLILGMGRIGTGA-YDELRARYGKISLGIEIRE-EAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHHHCSCEEEEESCH-HHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcEEEECCCHHHHHH-HHHHHhccCCeEEEEECCH-HHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 458899999999985 6777778 99999999643 33456677898877663211 111000113588888854
No 43
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.54 E-value=0.66 Score=45.89 Aligned_cols=113 Identities=19% Similarity=0.159 Sum_probs=66.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|.-|.+ +|..|+..|++|.++|.+.. .++.+.+.|+...- +..+.. ..+|+|++.. ++..
T Consensus 22 ~~I~iIG~G~mG~~-~A~~l~~~G~~V~~~dr~~~-~~~~l~~~g~~~~~--~~~~~~-----~~aDvvi~~v---p~~~ 89 (310)
T 3doj_A 22 MEVGFLGLGIMGKA-MSMNLLKNGFKVTVWNRTLS-KCDELVEHGASVCE--SPAEVI-----KKCKYTIAML---SDPC 89 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSGG-GGHHHHHTTCEECS--SHHHHH-----HHCSEEEECC---SSHH
T ss_pred CEEEEECccHHHHH-HHHHHHHCCCeEEEEeCCHH-HHHHHHHCCCeEcC--CHHHHH-----HhCCEEEEEc---CCHH
Confidence 56999999999986 57777889999999996533 45566677876421 111111 1478888864 2222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+..... +- ..+... .....+| |.-|+.+..++.-+...+.+.|.
T Consensus 90 ~~~~v~~-~~-----~~l~~~-l~~g~~v-v~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 90 AALSVVF-DK-----GGVLEQ-ICEGKGY-IDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp HHHHHHH-ST-----TCGGGG-CCTTCEE-EECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHh-Cc-----hhhhhc-cCCCCEE-EECCCCCHHHHHHHHHHHHHcCC
Confidence 2322210 00 001111 1222344 44556677777777888888775
No 44
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.25 E-value=0.25 Score=48.23 Aligned_cols=113 Identities=18% Similarity=0.088 Sum_probs=65.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCHH
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVE 156 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~ 156 (538)
+|.|||.|.-|.+ +|..|+..|++|.++|.+.. ..+.+.+.|+... .+..+.. ...|+|++... +.+.
T Consensus 3 ~I~iiG~G~mG~~-~a~~l~~~G~~V~~~dr~~~-~~~~~~~~g~~~~--~~~~~~~-----~~advvi~~v~---~~~~ 70 (287)
T 3pdu_A 3 TYGFLGLGIMGGP-MAANLVRAGFDVTVWNRNPA-KCAPLVALGARQA--SSPAEVC-----AACDITIAMLA---DPAA 70 (287)
T ss_dssp CEEEECCSTTHHH-HHHHHHHHTCCEEEECSSGG-GGHHHHHHTCEEC--SCHHHHH-----HHCSEEEECCS---SHHH
T ss_pred eEEEEccCHHHHH-HHHHHHHCCCeEEEEcCCHH-HHHHHHHCCCeec--CCHHHHH-----HcCCEEEEEcC---CHHH
Confidence 5899999999987 46777788999999996533 3455666677542 1211111 14788888642 2223
Q ss_pred HHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 157 ILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 157 l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
+.......- .+... .++..+| |.-|+++..++.-+...+.+.|..
T Consensus 71 ~~~v~~~~~------~l~~~-l~~g~~v-v~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 71 AREVCFGAN------GVLEG-IGGGRGY-IDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp HHHHHHSTT------CGGGT-CCTTCEE-EECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHcCch------hhhhc-ccCCCEE-EECCCCCHHHHHHHHHHHHHcCCE
Confidence 322210000 00111 1122344 455567888888888888887753
No 45
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.95 E-value=0.51 Score=46.81 Aligned_cols=108 Identities=13% Similarity=0.110 Sum_probs=64.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCC-ChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVW-SSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.+|.|||+|.-|.+ +|..|+..|+ +|.++|.+. .+-.+.+.+.|+...- +..+.. ..+|+|++... +.
T Consensus 25 ~~I~iIG~G~mG~~-~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~--~~~e~~-----~~aDvVi~~vp--~~ 94 (312)
T 3qsg_A 25 MKLGFIGFGEAASA-IASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKA--SVAEVA-----GECDVIFSLVT--AQ 94 (312)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECS--CHHHHH-----HHCSEEEECSC--TT
T ss_pred CEEEEECccHHHHH-HHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeC--CHHHHH-----hcCCEEEEecC--ch
Confidence 56999999999986 5777778899 999999753 3445566777876522 211111 14788888642 22
Q ss_pred CHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 154 NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
. ....+. ++.... +. ..|.|.-|..+..|+.-+...+...
T Consensus 95 ~-~~~~~~----------~l~~~l-~~-~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 95 A-ALEVAQ----------QAGPHL-CE-GALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp T-HHHHHH----------HHGGGC-CT-TCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred h-HHHHHH----------hhHhhc-CC-CCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 2 111111 111111 12 2455556666777777777777766
No 46
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.68 E-value=0.75 Score=44.91 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=65.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCHH
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVE 156 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~ 156 (538)
+|.|||.|..|.. ++..|+..|++|.++|.+. +..+.+.+.|+... .+..+.. ..+|+|++... +...
T Consensus 7 ~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~--~~~~~~~-----~~~D~vi~~v~---~~~~ 74 (299)
T 1vpd_A 7 KVGFIGLGIMGKP-MSKNLLKAGYSLVVSDRNP-EAIADVIAAGAETA--STAKAIA-----EQCDVIITMLP---NSPH 74 (299)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHHTTCEEC--SSHHHHH-----HHCSEEEECCS---SHHH
T ss_pred eEEEECchHHHHH-HHHHHHhCCCEEEEEeCCH-HHHHHHHHCCCeec--CCHHHHH-----hCCCEEEEECC---CHHH
Confidence 6899999999987 4677777899999998542 23455666676542 1111111 14788888642 1112
Q ss_pred HHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 157 ILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 157 l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
+..+... . .++.... +...+| |.-++|...+...+...+...|.
T Consensus 75 ~~~~~~~-~-----~~l~~~l-~~~~~v-v~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 75 VKEVALG-E-----NGIIEGA-KPGTVL-IDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHHHHS-T-----TCHHHHC-CTTCEE-EECSCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHhC-c-----chHhhcC-CCCCEE-EECCCCCHHHHHHHHHHHHHcCC
Confidence 2222100 0 0111111 222344 66689998888888888877664
No 47
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=90.60 E-value=0.25 Score=49.29 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=30.0
Q ss_pred CCcEEEEeC--CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSG--SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTG--TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+.++|+|+| =.|||||+.-|+..|.+.|++|..+
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllI 82 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQI 82 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEE
Confidence 568999995 6789999999999999999997654
No 48
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.58 E-value=0.53 Score=46.52 Aligned_cols=112 Identities=21% Similarity=0.170 Sum_probs=66.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+. +..+.+.+.|+... .+..+.. ...|+|++.. ++..
T Consensus 10 ~~IgiIG~G~mG~~-~A~~l~~~G~~V~~~dr~~-~~~~~~~~~g~~~~--~~~~e~~-----~~aDvVi~~v---p~~~ 77 (306)
T 3l6d_A 10 FDVSVIGLGAMGTI-MAQVLLKQGKRVAIWNRSP-GKAAALVAAGAHLC--ESVKAAL-----SASPATIFVL---LDNH 77 (306)
T ss_dssp CSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSH-HHHHHHHHHTCEEC--SSHHHHH-----HHSSEEEECC---SSHH
T ss_pred CeEEEECCCHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHHCCCeec--CCHHHHH-----hcCCEEEEEe---CCHH
Confidence 46999999999986 5777788999999998543 23455666677542 1211111 1478888864 2222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.+...... .. +... ....+| |.-|+++..++.-+...++..|..
T Consensus 78 ~~~~v~~~-------~~-l~~~-~~g~iv-id~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 78 ATHEVLGM-------PG-VARA-LAHRTI-VDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp HHHHHHTS-------TT-HHHH-TTTCEE-EECCCCCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHhcc-------cc-hhhc-cCCCEE-EECCCCCHHHHHHHHHHHHHcCCe
Confidence 23322110 01 1112 223344 455667777888888888887754
No 49
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.34 E-value=1 Score=43.96 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=64.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|..|.+ ++..|...|++|.++|.+. +..+.+.+.|+... .+..+.. ..+|+|++... ...
T Consensus 5 ~~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~--~~~~~~~-----~~~D~vi~~vp---~~~ 72 (301)
T 3cky_A 5 IKIGFIGLGAMGKP-MAINLLKEGVTVYAFDLME-ANVAAVVAQGAQAC--ENNQKVA-----AASDIIFTSLP---NAG 72 (301)
T ss_dssp CEEEEECCCTTHHH-HHHHHHHTTCEEEEECSSH-HHHHHHHTTTCEEC--SSHHHHH-----HHCSEEEECCS---SHH
T ss_pred CEEEEECccHHHHH-HHHHHHHCCCeEEEEeCCH-HHHHHHHHCCCeec--CCHHHHH-----hCCCEEEEECC---CHH
Confidence 56999999999986 4666777899999998532 23445555676532 1211111 14788888641 222
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+...... . .++.... +. ..+-|.-++|...+...+...+...|.
T Consensus 73 ~~~~v~~~-~-----~~l~~~l-~~-~~~vv~~~~~~~~~~~~l~~~~~~~g~ 117 (301)
T 3cky_A 73 IVETVMNG-P-----GGVLSAC-KA-GTVIVDMSSVSPSSTLKMAKVAAEKGI 117 (301)
T ss_dssp HHHHHHHS-T-----TCHHHHS-CT-TCEEEECCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcC-c-----chHhhcC-CC-CCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 22222100 0 0111111 22 235566689997777778888877664
No 50
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.29 E-value=1.2 Score=42.96 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=61.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCHH
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVE 156 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~ 156 (538)
+|.|||.|..|.+ ++..|+. |++|.++|.+. +..+.+.+.|+...- ..+.. ..+|+|++... ....
T Consensus 3 ~i~iiG~G~~G~~-~a~~l~~-g~~V~~~~~~~-~~~~~~~~~g~~~~~---~~~~~-----~~~D~vi~~v~---~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYP-MAGHLAR-RFPTLVWNRTF-EKALRHQEEFGSEAV---PLERV-----AEARVIFTCLP---TTRE 68 (289)
T ss_dssp CEEEECCSTTHHH-HHHHHHT-TSCEEEECSST-HHHHHHHHHHCCEEC---CGGGG-----GGCSEEEECCS---SHHH
T ss_pred eEEEEcccHHHHH-HHHHHhC-CCeEEEEeCCH-HHHHHHHHCCCcccC---HHHHH-----hCCCEEEEeCC---ChHH
Confidence 5899999999986 4666777 99999998543 234445555665432 22211 15799988642 1111
Q ss_pred HHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 157 ILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 157 l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
+..+.+ ++... . ....+.|.-+++...+..-+.+.+...|
T Consensus 69 ~~~v~~---------~l~~~-l-~~~~~vv~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 69 VYEVAE---------ALYPY-L-REGTYWVDATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp HHHHHH---------HHTTT-C-CTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHH---------HHHhh-C-CCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 221110 11111 1 1234555556788888777888887655
No 51
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=90.24 E-value=1.1 Score=43.85 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=71.9
Q ss_pred CceEEEEeechh-hHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 75 KGWIHFVGIGGS-GLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 75 ~~~v~vlG~G~s-G~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.++++|||.|.+ |+. +|.+|...|++|+..+.+..+..+.+.+..+.+...-.+..+.. ++. ++..+|+..|+++.
T Consensus 159 gk~vvVIG~s~iVG~p-~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~-~~v-k~GavVIDVgi~r~ 235 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRP-MSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG-DWI-KEGAIVIDVGINRL 235 (288)
T ss_dssp TCEEEEECCCTTTHHH-HHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCT-TTS-CTTCEEEECCCEEC
T ss_pred CCEEEEECCChHHHHH-HHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCH-HHc-CCCcEEEEccCCcc
Confidence 467999999975 887 58888889999999885543333334443333322222222221 111 45678999888753
Q ss_pred CHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 154 NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
. .| .+.+..+|-.-......+--|-|--|.=|++.++.+.++++
T Consensus 236 ~--------~g-~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa 279 (288)
T 1b0a_A 236 E--------NG-KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQAC 279 (288)
T ss_dssp T--------TS-CEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHH
T ss_pred C--------CC-CccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHH
Confidence 1 01 23333333221222233444557899999999999999875
No 52
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.46 E-value=1.6 Score=46.09 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=64.8
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHC-CC-----eEEeCCCCCCcCCCCCCCCCCEEEEcCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA-GA-----NLHIGHSVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~-Ga-----~~~~~~~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
+|.|||.|.-|.+ +|..|+..|++|.++|.+. +.++.+.+. |. .+....+..++.. ..+.+|+|++...
T Consensus 3 kIgVIG~G~mG~~-lA~~La~~G~~V~v~dr~~-~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~--~l~~aDvVilaVp- 77 (478)
T 1pgj_A 3 DVGVVGLGVMGAN-LALNIAEKGFKVAVFNRTY-SKSEEFMKANASAPFAGNLKAFETMEAFAA--SLKKPRKALILVQ- 77 (478)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTTCCEEEECSSH-HHHHHHHHHTTTSTTGGGEEECSCHHHHHH--HBCSSCEEEECCC-
T ss_pred EEEEEChHHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHHhcCCCCCCCCeEEECCHHHHHh--cccCCCEEEEecC-
Confidence 4899999999986 5777888999999998542 233444433 51 1222222211110 0013788888642
Q ss_pred CCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 151 PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 151 ~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
....+.... .++.... ....|-|..+||...++.-+.+.+...|.
T Consensus 78 --~~~~v~~vl---------~~l~~~l--~~g~iIId~sng~~~~~~~l~~~l~~~g~ 122 (478)
T 1pgj_A 78 --AGAATDSTI---------EQLKKVF--EKGDILVDTGNAHFKDQGRRAQQLEAAGL 122 (478)
T ss_dssp --CSHHHHHHH---------HHHHHHC--CTTCEEEECCCCCHHHHHHHHHHHHTTTC
T ss_pred --ChHHHHHHH---------HHHHhhC--CCCCEEEECCCCChHHHHHHHHHHHHCCC
Confidence 222222221 0122111 22346678999998777777788877664
No 53
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.44 E-value=0.58 Score=44.85 Aligned_cols=62 Identities=23% Similarity=0.190 Sum_probs=41.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC-hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS-SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~-~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|.-|.+ +|..|+..|++|.++|.... +..+.+.+.|+. .+..+.. ...|+|++..
T Consensus 2 ~I~iIG~G~mG~~-la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~----~~~~~~~-----~~aDvvi~~v 64 (264)
T 1i36_A 2 RVGFIGFGEVAQT-LASRLRSRGVEVVTSLEGRSPSTIERARTVGVT----ETSEEDV-----YSCPVVISAV 64 (264)
T ss_dssp EEEEESCSHHHHH-HHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE----ECCHHHH-----HTSSEEEECS
T ss_pred eEEEEechHHHHH-HHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc----CCHHHHH-----hcCCEEEEEC
Confidence 5889999999986 57777789999999875322 345556666775 2221211 1479988864
No 54
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.37 E-value=0.25 Score=45.80 Aligned_cols=30 Identities=37% Similarity=0.369 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|.+| |..|+.+|.+|.+.|.
T Consensus 4 dV~IIGaGpaGL~a-A~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSA-AQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEEC
Confidence 38999999999986 8999999999999984
No 55
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.95 E-value=3 Score=43.54 Aligned_cols=32 Identities=34% Similarity=0.200 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+
T Consensus 3 mkI~VIG~G~vG~~-lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLV-SATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHH-HHHHHHhcCCEEEEEECC
Confidence 36899999999987 577778899999999965
No 56
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.59 E-value=6.7 Score=36.25 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=48.5
Q ss_pred hhhcCCCceEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCC-eEEeCCCCCCcCCCCCCCCCCEEEE
Q 009279 69 VDFKNRKGWIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA-NLHIGHSVSNIQGNDGSRFPNAVVA 146 (538)
Q Consensus 69 ~~~~~~~~~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga-~~~~~~~~~~~~~~~~~~~~d~vvv 146 (538)
..+++ ++|+|.|. |+.|... ++.|+.+|++|.+.+.+.. -...+.+.++ .++.++-...+. ...+.+|.||-
T Consensus 17 ~~l~~--~~ilVtGatG~iG~~l-~~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~Dl~~~~~--~~~~~~D~vi~ 90 (236)
T 3e8x_A 17 LYFQG--MRVLVVGANGKVARYL-LSELKNKGHEPVAMVRNEE-QGPELRERGASDIVVANLEEDFS--HAFASIDAVVF 90 (236)
T ss_dssp ----C--CEEEEETTTSHHHHHH-HHHHHHTTCEEEEEESSGG-GHHHHHHTTCSEEEECCTTSCCG--GGGTTCSEEEE
T ss_pred cCcCC--CeEEEECCCChHHHHH-HHHHHhCCCeEEEEECChH-HHHHHHhCCCceEEEcccHHHHH--HHHcCCCEEEE
Confidence 34455 56899998 7888875 5666678999999986543 3445556688 776653222211 11136899998
Q ss_pred cCCCCC
Q 009279 147 SSAIPQ 152 (538)
Q Consensus 147 sp~i~~ 152 (538)
..++..
T Consensus 91 ~ag~~~ 96 (236)
T 3e8x_A 91 AAGSGP 96 (236)
T ss_dssp CCCCCT
T ss_pred CCCCCC
Confidence 777654
No 57
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=88.55 E-value=0.53 Score=42.42 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCCeEEEe
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDDLTAIV 214 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~~~~ 214 (538)
.+++|+|+|.. ||||++..|...|+..|++++.+.
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik 39 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 39 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEE
Confidence 46899999975 899999999999999999976543
No 58
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.32 E-value=0.9 Score=38.34 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=44.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHH-CCCeEEeCCCCC--CcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE-AGANLHIGHSVS--NIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~-~Ga~~~~~~~~~--~~~~~~~~~~~d~vvvsp~ 149 (538)
.+|+|+|.|..|... +..|...|++|.+.|.+. +..+.+.+ .|+..+.+.... .+.. .....+|+|++..+
T Consensus 5 m~i~IiG~G~iG~~~-a~~L~~~g~~v~~~d~~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 5 MYIIIAGIGRVGYTL-AKSLSEKGHDIVLIDIDK-DICKKASAEIDALVINGDCTKIKTLED-AGIEDADMYIAVTG 78 (140)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCH-HHHHHHHHHCSSEEEESCTTSHHHHHH-TTTTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCeEEEEECCH-HHHHHHHHhcCcEEEEcCCCCHHHHHH-cCcccCCEEEEeeC
Confidence 368899999999974 677777999999998543 23344443 477665553211 1100 00125899998754
No 59
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=88.31 E-value=0.44 Score=45.07 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=29.9
Q ss_pred CCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+++.|.|||| .|||+++.-|.+.|++.|++|..+
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 4688999998 599999999999999999997653
No 60
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.25 E-value=2.3 Score=44.60 Aligned_cols=34 Identities=18% Similarity=-0.002 Sum_probs=28.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS 110 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~ 110 (538)
++|.|||.|.-|.+ +|..|+..|++|.+.|.+..
T Consensus 55 ~kVaVIGaG~MG~~-IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKA-MAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCeEEEEECcHH
Confidence 57999999988876 57778889999999997643
No 61
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.11 E-value=0.66 Score=46.61 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=47.7
Q ss_pred hhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 69 ~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
..+.. ++|.|||.|..|.+ +|..|+..|++|.+.|.+.....+.+.+.|+.+. ...+.+. .+|+|++..
T Consensus 12 ~~l~~--~~I~IIG~G~mG~a-lA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~--~~~e~~~------~aDvVilav 80 (338)
T 1np3_A 12 SIIQG--KKVAIIGYGSQGHA-HACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--DVKTAVA------AADVVMILT 80 (338)
T ss_dssp HHHHT--SCEEEECCSHHHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--CHHHHHH------TCSEEEECS
T ss_pred chhcC--CEEEEECchHHHHH-HHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc--cHHHHHh------cCCEEEEeC
Confidence 34444 45999999999987 5777888999999998765544556677888653 1111122 579998864
No 62
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=88.02 E-value=0.62 Score=45.57 Aligned_cols=117 Identities=19% Similarity=0.174 Sum_probs=67.1
Q ss_pred CceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 75 KGWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 75 ~~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
-++++|+|.|+ .|+. +|.+|..+|++|+..+.+.. .+.+.. ..+.+++. -.+..+.. ++. ++..+|+..|++
T Consensus 161 Gk~vvVIG~s~iVG~p-~A~lL~~~gAtVtv~hs~t~-~L~~~~-~~ADIVI~Avg~p~~I~~-~~v-k~GavVIDvgi~ 235 (285)
T 3l07_A 161 GAYAVVVGASNVVGKP-VSQLLLNAKATVTTCHRFTT-DLKSHT-TKADILIVAVGKPNFITA-DMV-KEGAVVIDVGIN 235 (285)
T ss_dssp TCEEEEECCCTTTHHH-HHHHHHHTTCEEEEECTTCS-SHHHHH-TTCSEEEECCCCTTCBCG-GGS-CTTCEEEECCCE
T ss_pred CCEEEEECCCchhHHH-HHHHHHHCCCeEEEEeCCch-hHHHhc-ccCCEEEECCCCCCCCCH-HHc-CCCcEEEEeccc
Confidence 36789999988 5886 48888889999998874322 233322 24444432 12211211 111 456788888877
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
+.. | .+.+..+|-.-......+--|-|=-|.=|++.++.+.++++
T Consensus 236 ~~~---------g-~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~ 280 (285)
T 3l07_A 236 HVD---------G-KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCA 280 (285)
T ss_dssp EET---------T-EEECSBCHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHH
T ss_pred CcC---------C-ceecCccHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHH
Confidence 631 2 23333333221111112222346689999999999999764
No 63
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.94 E-value=0.77 Score=45.21 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=68.9
Q ss_pred CceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 75 KGWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 75 ~~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
.++++|||.|. .|+. +|.+|...|++|+..+.+..+ +.+.. ..+.++++ -.+..+.. ++. ++..+|+..|++
T Consensus 165 gk~vvVIG~s~iVG~p-~A~lL~~~gAtVtv~hs~t~~-L~~~~-~~ADIVI~Avg~p~~I~~-~~v-k~GavVIDVgi~ 239 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAP-MHDLLLWNNATVTTCHSKTAH-LDEEV-NKGDILVVATGQPEMVKG-EWI-KPGAIVIDCGIN 239 (301)
T ss_dssp TCEEEEECCCTTTHHH-HHHHHHHTTCEEEEECTTCSS-HHHHH-TTCSEEEECCCCTTCBCG-GGS-CTTCEEEECCCB
T ss_pred CCEEEEECCCchHHHH-HHHHHHhCCCeEEEEECCccc-HHHHh-ccCCEEEECCCCcccCCH-HHc-CCCcEEEEccCC
Confidence 36799999996 5887 478888899999998754332 33222 24444443 22211211 111 357899999987
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
+..-. .++.|-.+....+|-.-......+--|-|--|.=|++.++.+.++++
T Consensus 240 ~~~d~---~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa 291 (301)
T 1a4i_A 240 YVPDD---KKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESA 291 (301)
T ss_dssp C-------------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHH
T ss_pred Ccccc---cccCCCeeeccccHHHhhhhceEeCCCCCCccHHHHHHHHHHHHHHH
Confidence 63210 11122223333343221112222333447889999999999999875
No 64
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.85 E-value=4.1 Score=42.50 Aligned_cols=35 Identities=26% Similarity=0.152 Sum_probs=29.4
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS 110 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~ 110 (538)
+-+|.|||+|--|.+ +|..|+..|++|.++|.+..
T Consensus 8 ~~~~~vIGlG~vG~~-~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLV-SGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHH-HHHHHHHCCCEEEEEeCCHH
Confidence 456899999999986 57888889999999997643
No 65
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.59 E-value=0.69 Score=47.90 Aligned_cols=71 Identities=17% Similarity=0.258 Sum_probs=50.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCC-C-cCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS-N-IQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~-~-~~~~~~~~~~d~vvvsp~ 149 (538)
.+|.|+|.|..|+.. ++.|...|..|.+.|.++ +.++.+.+.|..++.|+... + +.. .+...++.||+..+
T Consensus 5 ~~viIiG~Gr~G~~v-a~~L~~~g~~vvvId~d~-~~v~~~~~~g~~vi~GDat~~~~L~~-agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQIT-GRLLLSSGVKMVVLDHDP-DHIETLRKFGMKVFYGDATRMDLLES-AGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEEECCH-HHHHHHHHTTCCCEESCTTCHHHHHH-TTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHH-HHHHHHCCCCEEEEECCH-HHHHHHHhCCCeEEEcCCCCHHHHHh-cCCCccCEEEECCC
Confidence 458899999999974 788888999999999543 34567778899988874322 1 110 11235888888653
No 66
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.53 E-value=0.88 Score=45.08 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=64.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|...|.+|.++|..... +.+.+.|+... +...+. ...|+|+......+...
T Consensus 143 ~~vgIiG~G~IG~~~-A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~l~ell-----~~aDvV~l~~p~~~~t~ 211 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQV-AKIANALGMNILLYDPYPNE--ERAKEVNGKFV---DLETLL-----KESDVVTIHVPLVESTY 211 (307)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCH--HHHHHTTCEEC---CHHHHH-----HHCSEEEECCCCSTTTT
T ss_pred ceEEEEccCHHHHHH-HHHHHHCCCEEEEECCCCCh--hhHhhcCcccc---CHHHHH-----hhCCEEEEecCCChHHh
Confidence 469999999999985 77778899999999976544 34556787542 111111 14788887532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
.++.. +.+... ++..++--+|+ |.-....-+...|+...
T Consensus 212 ----------~li~~-~~l~~m-k~ga~lin~ar-g~~vd~~aL~~aL~~g~ 250 (307)
T 1wwk_A 212 ----------HLINE-ERLKLM-KKTAILINTSR-GPVVDTNALVKALKEGW 250 (307)
T ss_dssp ----------TCBCH-HHHHHS-CTTCEEEECSC-GGGBCHHHHHHHHHHTS
T ss_pred ----------hhcCH-HHHhcC-CCCeEEEECCC-CcccCHHHHHHHHHhCC
Confidence 12221 333333 33445555666 66555566666777644
No 67
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=87.41 E-value=0.52 Score=43.76 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=27.2
Q ss_pred cEEEEeCC---CCchHHHHHHHHHHHHcCCCeEE
Q 009279 182 NLIAVSGS---HGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 182 ~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
++|.||++ .|||||+.-|+..|.+.|++|..
T Consensus 2 k~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll 35 (224)
T 1byi_A 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAG 35 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 57888876 68999999999999999999754
No 68
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.31 E-value=1.1 Score=44.00 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=43.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.++|.|+|.|..|+++ |+.|+..|.+|.++|.... ..+.+.+.|+...--....... ...|+|+...
T Consensus 155 g~~v~IiG~G~iG~~~-a~~l~~~G~~V~~~dr~~~-~~~~~~~~g~~~~~~~~l~~~l-----~~aDvVi~~~ 221 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSV-ARKFAALGAKVKVGARESD-LLARIAEMGMEPFHISKAAQEL-----RDVDVCINTI 221 (293)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESSHH-HHHHHHHTTSEEEEGGGHHHHT-----TTCSEEEECC
T ss_pred CCEEEEEeeCHHHHHH-HHHHHhCCCEEEEEECCHH-HHHHHHHCCCeecChhhHHHHh-----cCCCEEEECC
Confidence 3579999999999986 6667789999999995432 1233456687643111111111 2578888754
No 69
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=87.12 E-value=0.6 Score=44.94 Aligned_cols=35 Identities=23% Similarity=0.427 Sum_probs=30.7
Q ss_pred cCCcEEEEeCCC---CchHHHHHHHHHHHHcCCCeEEE
Q 009279 179 EKYNLIAVSGSH---GKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 179 ~~~~vI~VTGTn---GKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
++++.|-||||. |||+++.-|.+.|++.|++|..+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~f 61 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVC 61 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 356899999987 89999999999999999997644
No 70
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.12 E-value=5.1 Score=41.53 Aligned_cols=112 Identities=19% Similarity=0.277 Sum_probs=67.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCe------------------EEeCCCCCCcCCCCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGAN------------------LHIGHSVSNIQGNDGS 138 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~------------------~~~~~~~~~~~~~~~~ 138 (538)
+..|||+|--|.+ +|..|+..|++|.|+|.+.. -++.+.+.+.. +....+ +
T Consensus 13 ~~~ViGlGyvGlp-~A~~La~~G~~V~~~D~~~~-kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd---~------ 81 (431)
T 3ojo_A 13 KLTVVGLGYIGLP-TSIMFAKHGVDVLGVDINQQ-TIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTT---P------ 81 (431)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTTCEEEEECSCHH-HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESS---C------
T ss_pred ccEEEeeCHHHHH-HHHHHHHCCCEEEEEECCHH-HHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCc---h------
Confidence 4679999999997 57778889999999996532 22233221111 111111 1
Q ss_pred CCCCEEEEcCCCCCC-----C---HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 139 RFPNAVVASSAIPQD-----N---VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 139 ~~~d~vvvsp~i~~~-----~---~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
..+|++++...-|.+ . ..+..+. +-+....++..+|...-|--=+||..+...+++..|.+
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~----------~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~ 150 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRAL----------DSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFT 150 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHH----------HHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCC
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHH----------HHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCC
Confidence 247888887655442 1 2233221 11222123445777778999999999998888877753
No 71
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.87 E-value=5.8 Score=38.87 Aligned_cols=115 Identities=20% Similarity=0.176 Sum_probs=60.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChhHH-HHH--HCCC------eEEeCCCCCCcCCCCCCCCCCEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSYME-GLL--EAGA------NLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~~~-~~~--~~Ga------~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
.+|.|+|.|..|.+ +|..|+..|. +|...|.+.. .++ .+. +.|. .+....+...+ +.+|+|
T Consensus 8 mkI~IiGaG~vG~~-~a~~l~~~g~~~~V~l~d~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~aD~V 79 (319)
T 1lld_A 8 TKLAVIGAGAVGST-LAFAAAQRGIAREIVLEDIAKE-RVEAEVLDMQHGSSFYPTVSIDGSDDPEIC------RDADMV 79 (319)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSHH-HHHHHHHHHHHTGGGSTTCEEEEESCGGGG------TTCSEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChh-HHHHHHHHHHhhhhhcCCeEEEeCCCHHHh------CCCCEE
Confidence 46999999999987 5777788898 9999996532 121 111 2232 22222122222 258999
Q ss_pred EEcCCCCCCC--HHHHHHHHCCCCeeeH-HHHHHHHhcCCcEEEEeCCCCchHHHHHHHH
Q 009279 145 VASSAIPQDN--VEILHAKSVGVPIYKR-DYWLAKLTEKYNLIAVSGSHGKSTTASMLAY 201 (538)
Q Consensus 145 vvsp~i~~~~--~~l~~a~~~gi~vi~~-~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~ 201 (538)
|+..+.+... .....+ ..+++++.. ...+... ....+-|.-|||=.+.+.+...
T Consensus 80 ii~v~~~~~~g~~r~~~~-~~n~~~~~~~~~~i~~~--~~~~~vi~~~Np~~~~~~~~~~ 136 (319)
T 1lld_A 80 VITAGPRQKPGQSRLELV-GATVNILKAIMPNLVKV--APNAIYMLITNPVDIATHVAQK 136 (319)
T ss_dssp EECCCCCCCTTCCHHHHH-HHHHHHHHHHHHHHHHH--CTTSEEEECCSSHHHHHHHHHH
T ss_pred EECCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHh--CCCceEEEecCchHHHHHHHHH
Confidence 9988765432 000000 000000000 1111211 2344566679999887766544
No 72
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=86.86 E-value=1.4 Score=43.32 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=45.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHC-------CCeEEeCCCCCCcCCCCCCCCCCEEEEc
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA-------GANLHIGHSVSNIQGNDGSRFPNAVVAS 147 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~-------Ga~~~~~~~~~~~~~~~~~~~~d~vvvs 147 (538)
.++|.|||+|.-|.+ +|..|+ .|++|.++|.+.. .++.+.+. ++... .+...+. .+|+||..
T Consensus 12 ~~~V~vIG~G~MG~~-iA~~la-aG~~V~v~d~~~~-~~~~~~~~l~~~~~~~i~~~--~~~~~~~------~aDlViea 80 (293)
T 1zej_A 12 HMKVFVIGAGLMGRG-IAIAIA-SKHEVVLQDVSEK-ALEAAREQIPEELLSKIEFT--TTLEKVK------DCDIVMEA 80 (293)
T ss_dssp CCEEEEECCSHHHHH-HHHHHH-TTSEEEEECSCHH-HHHHHHHHSCGGGGGGEEEE--SSCTTGG------GCSEEEEC
T ss_pred CCeEEEEeeCHHHHH-HHHHHH-cCCEEEEEECCHH-HHHHHHHHHHHHHhCCeEEe--CCHHHHc------CCCEEEEc
Confidence 467999999988876 567777 9999999996532 34444443 44432 2222232 58999987
Q ss_pred CCCCCCCHHHH
Q 009279 148 SAIPQDNVEIL 158 (538)
Q Consensus 148 p~i~~~~~~l~ 158 (538)
. ++...++
T Consensus 81 v---pe~~~vk 88 (293)
T 1zej_A 81 V---FEDLNTK 88 (293)
T ss_dssp C---CSCHHHH
T ss_pred C---cCCHHHH
Confidence 5 4555554
No 73
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.86 E-value=8.3 Score=37.94 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=45.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhHH---HHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYME---GLLE------AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~~---~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
.+|.|+|.|..|.+ +|..|+..|. +|..+|.+...... ++.. ....+....+.+.+ +.+|+||
T Consensus 5 ~kI~VIGaG~~G~~-ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~------~~aDiVi 77 (317)
T 2ewd_A 5 RKIAVIGSGQIGGN-IAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYADI------SGSDVVI 77 (317)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHHHh------CCCCEEE
Confidence 57999999999987 6777888898 99999976542111 1111 12333332222223 2689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
...++|..
T Consensus 78 ~avg~p~~ 85 (317)
T 2ewd_A 78 ITASIPGR 85 (317)
T ss_dssp ECCCCSSC
T ss_pred EeCCCCCC
Confidence 98877653
No 74
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=86.85 E-value=0.62 Score=42.43 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=27.9
Q ss_pred CcEEEEe---CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVS---GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+++|+|+ |-.||||++..++..|...|++|..+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlli 36 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVV 36 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence 3688898 55779999999999999999987554
No 75
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=86.72 E-value=1.1 Score=43.50 Aligned_cols=111 Identities=16% Similarity=0.135 Sum_probs=62.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|..|.+ +|..|...|++|.++| +.. ..+.+.+.|+... .+..+.. ..+|+|++... ...
T Consensus 4 m~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~-~~~-~~~~~~~~g~~~~--~~~~~~~-----~~~D~vi~~vp---~~~ 70 (295)
T 1yb4_A 4 MKLGFIGLGIMGSP-MAINLARAGHQLHVTT-IGP-VADELLSLGAVNV--ETARQVT-----EFADIIFIMVP---DTP 70 (295)
T ss_dssp CEEEECCCSTTHHH-HHHHHHHTTCEEEECC-SSC-CCHHHHTTTCBCC--SSHHHHH-----HTCSEEEECCS---SHH
T ss_pred CEEEEEccCHHHHH-HHHHHHhCCCEEEEEc-CHH-HHHHHHHcCCccc--CCHHHHH-----hcCCEEEEECC---CHH
Confidence 36999999999986 4666777899999998 543 3445555675431 1111111 14789888642 221
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
.+.......- ++. +.-....+-|.=++|...+..-+...+...|
T Consensus 71 ~~~~v~~~~~------~l~--~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 114 (295)
T 1yb4_A 71 QVEDVLFGEH------GCA--KTSLQGKTIVDMSSISPIETKRFAQRVNEMG 114 (295)
T ss_dssp HHHHHHHSTT------SST--TSCCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHhCch------hHh--hcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 1222211000 000 0011234556667888777777777777654
No 76
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=86.53 E-value=2.5 Score=41.49 Aligned_cols=113 Identities=19% Similarity=0.141 Sum_probs=63.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
.+|.|||.|..|.+ +|..|+..|++|.++|.+.. ..+.+.+.|+... .+..+.. ..+|+|++... +..
T Consensus 31 ~~I~iIG~G~mG~~-~a~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~--~~~~~~~-----~~~DvVi~av~---~~~ 98 (316)
T 2uyy_A 31 KKIGFLGLGLMGSG-IVSNLLKMGHTVTVWNRTAE-KCDLFIQEGARLG--RTPAEVV-----STCDITFACVS---DPK 98 (316)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTTCCEEEECSSGG-GGHHHHHTTCEEC--SCHHHHH-----HHCSEEEECCS---SHH
T ss_pred CeEEEEcccHHHHH-HHHHHHhCCCEEEEEeCCHH-HHHHHHHcCCEEc--CCHHHHH-----hcCCEEEEeCC---CHH
Confidence 45899999999986 46777778999999986432 3455666776542 1111111 14788888642 112
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+......-.. ++... .. ..+-|.-+|+...+..-+...+...|.
T Consensus 99 ~~~~v~~~~~~------~~~~l-~~-~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 99 AAKDLVLGPSG------VLQGI-RP-GKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp HHHHHHHSTTC------GGGGC-CT-TCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCchh------HhhcC-CC-CCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 22221110000 00011 11 234444567888777778888876554
No 77
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=86.34 E-value=0.7 Score=45.18 Aligned_cols=115 Identities=19% Similarity=0.159 Sum_probs=69.4
Q ss_pred CceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 75 KGWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 75 ~~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
-++++|+|.|+ .|+. +|.+|...|++|+..+.+.. .+.+.. ..+.+++. -.+..+.. ++. ++..+|+..|++
T Consensus 160 Gk~vvVvGrs~iVG~p-~A~lL~~~gAtVtv~h~~t~-~L~~~~-~~ADIVI~Avg~p~~I~~-~~v-k~GavVIDVgi~ 234 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRP-MATMLLNAGATVSVCHIKTK-DLSLYT-RQADLIIVAAGCVNLLRS-DMV-KEGVIVVDVGIN 234 (285)
T ss_dssp TCEEEEECCCTTTHHH-HHHHHHHTTCEEEEECTTCS-CHHHHH-TTCSEEEECSSCTTCBCG-GGS-CTTEEEEECCCE
T ss_pred CCEEEEECCCchHHHH-HHHHHHHCCCeEEEEeCCch-hHHHHh-hcCCEEEECCCCCCcCCH-HHc-CCCeEEEEeccC
Confidence 36789999988 5886 58888889999999875432 233322 24444442 22211221 111 467899998887
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEe---CCCCchHHHHHHHHHHHHc
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVS---GSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VT---GTnGKTTTt~ml~~iL~~~ 206 (538)
+.. .| .+....+|-. . .-+.-.|| |=-|.=|++.++.+.++++
T Consensus 235 ~~~--------~g-kl~GDVdf~~-v--~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~ 280 (285)
T 3p2o_A 235 RLE--------SG-KIVGDVDFEE-V--SKKSSYITPVPGGVGPMTIAMLLENTVKSA 280 (285)
T ss_dssp ECT--------TS-CEECSBCHHH-H--TTTEEEECCSSSSHHHHHHHHHHHHHHHHH
T ss_pred ccc--------CC-CEeccccHHH-H--HhhheEeCCCCCcCcHHHHHHHHHHHHHHH
Confidence 531 02 3444434321 1 12355666 5578999999999999865
No 78
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.33 E-value=0.73 Score=46.25 Aligned_cols=107 Identities=19% Similarity=0.199 Sum_probs=62.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||.|..|.+. |..|+..|.+|.++|..... +.+.+.|+.. . +...+. ...|+|++.....+...
T Consensus 151 ~~vgIIG~G~iG~~i-A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~--~-~l~~~l-----~~aDvVil~vp~~~~t~ 219 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAI-AKRAKGFNMRILYYSRTRKE--EVERELNAEF--K-PLEDLL-----RESDFVVLAVPLTRETY 219 (334)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCH--HHHHHHCCEE--C-CHHHHH-----HHCSEEEECCCCCTTTT
T ss_pred CEEEEEccCHHHHHH-HHHHHhCCCEEEEECCCcch--hhHhhcCccc--C-CHHHHH-----hhCCEEEECCCCChHHH
Confidence 469999999999975 77777899999999976543 3344557643 1 111111 14788888643222111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.++.+ +.+... +...++ |--+.|......-+...|+..
T Consensus 220 ----------~~i~~-~~~~~m-k~~ail-In~srg~~v~~~aL~~aL~~~ 257 (334)
T 2dbq_A 220 ----------HLINE-ERLKLM-KKTAIL-INIARGKVVDTNALVKALKEG 257 (334)
T ss_dssp ----------TCBCH-HHHHHS-CTTCEE-EECSCGGGBCHHHHHHHHHHT
T ss_pred ----------HhhCH-HHHhcC-CCCcEE-EECCCCcccCHHHHHHHHHhC
Confidence 12221 223322 233344 444467766666677788774
No 79
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.32 E-value=2 Score=45.27 Aligned_cols=113 Identities=14% Similarity=0.086 Sum_probs=63.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHC----CCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA----GANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~----Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
.+|.|||+|.-|.+ +|..|+..|++|.++|.+. +.++.+.+. |+.. ..+..++.. ..+.+|+|++...
T Consensus 6 ~~IgvIG~G~mG~~-lA~~L~~~G~~V~v~dr~~-~~~~~l~~~~~~~gi~~--~~s~~e~v~--~l~~aDvVilavp-- 77 (474)
T 2iz1_A 6 ANFGVVGMAVMGKN-LALNVESRGYTVAIYNRTT-SKTEEVFKEHQDKNLVF--TKTLEEFVG--SLEKPRRIMLMVQ-- 77 (474)
T ss_dssp BSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSH-HHHHHHHHHTTTSCEEE--CSSHHHHHH--TBCSSCEEEECCC--
T ss_pred CcEEEEeeHHHHHH-HHHHHHhCCCEEEEEcCCH-HHHHHHHHhCcCCCeEE--eCCHHHHHh--hccCCCEEEEEcc--
Confidence 45999999999986 5777788999999998542 223444432 4332 222211110 0013788888642
Q ss_pred CCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 152 QDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 152 ~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
....+....+ ++. +.-....+-|..+||....+.-+...+...|.
T Consensus 78 -~~~~v~~vl~---------~l~--~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~ 122 (474)
T 2iz1_A 78 -AGAATDATIK---------SLL--PLLDIGDILIDGGNTHFPDTMRRNAELADSGI 122 (474)
T ss_dssp -TTHHHHHHHH---------HHG--GGCCTTCEEEECSCCCHHHHHHHHHHTTTSSC
T ss_pred -CchHHHHHHH---------HHH--hhCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 2222222210 111 11112346678899997776666677776664
No 80
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=86.29 E-value=5 Score=39.94 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=45.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhH---HHHH----H--CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYM---EGLL----E--AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~---~~~~----~--~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
.+|.|+|.|..|.+ +|..|+..|. +|..+|.+...-. .++. . ....+....+.+.+ +.+|+||
T Consensus 15 ~kI~ViGaG~vG~~-iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al------~~aD~VI 87 (328)
T 2hjr_A 15 KKISIIGAGQIGST-IALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYL------QNSDVVI 87 (328)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHH------CCCCEEE
Confidence 47999999999987 6888898998 9999998754211 1111 1 12233332222333 2689999
Q ss_pred EcCCCCC
Q 009279 146 ASSAIPQ 152 (538)
Q Consensus 146 vsp~i~~ 152 (538)
...++|.
T Consensus 88 ~avg~p~ 94 (328)
T 2hjr_A 88 ITAGVPR 94 (328)
T ss_dssp ECCSCCC
T ss_pred EcCCCCC
Confidence 9987765
No 81
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.19 E-value=0.99 Score=38.22 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=43.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCC--CCcCCCCCCCCCCEEEEcCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSV--SNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~~~~~d~vvvsp~i 150 (538)
++|+|+|.|..|... +..|...|++|.+.|.+. +..+.+.+.|.....+... +.+.. .....+|+|+...+.
T Consensus 7 ~~v~I~G~G~iG~~~-a~~l~~~g~~v~~~d~~~-~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSI-VKELHRMGHEVLAVDINE-EKVNAYASYATHAVIANATEENELLS-LGIRNFEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCCEEEESCH-HHHHTTTTTCSEEEECCTTCHHHHHT-TTGGGCSEEEECCCS
T ss_pred CcEEEECCCHHHHHH-HHHHHHCCCEEEEEeCCH-HHHHHHHHhCCEEEEeCCCCHHHHHh-cCCCCCCEEEECCCC
Confidence 458999999999975 677778899999998532 2223334456665544221 11110 001257999987653
No 82
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.17 E-value=2.4 Score=43.49 Aligned_cols=42 Identities=26% Similarity=0.158 Sum_probs=29.8
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA 121 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga 121 (538)
+|.|||+|..|.+. |..|+. |++|.+.|.+. +-++.+.+.|.
T Consensus 2 kI~VIG~G~vG~~~-A~~La~-G~~V~~~d~~~-~~~~~l~~~~~ 43 (402)
T 1dlj_A 2 KIAVAGSGYVGLSL-GVLLSL-QNEVTIVDILP-SKVDKINNGLS 43 (402)
T ss_dssp EEEEECCSHHHHHH-HHHHTT-TSEEEEECSCH-HHHHHHHTTCC
T ss_pred EEEEECCCHHHHHH-HHHHhC-CCEEEEEECCH-HHHHHHHcCCC
Confidence 58999999999874 666666 99999999642 22344444444
No 83
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.97 E-value=1.3 Score=43.90 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=35.1
Q ss_pred hhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 70 DFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 70 ~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
++-....+|.|||.|.-|.+ +|..|+..|++|..+ . ..+.++.+.+.|....
T Consensus 14 ~~~~~~~kI~IiGaGa~G~~-~a~~L~~~G~~V~l~-~-~~~~~~~i~~~g~~~~ 65 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAVGCY-YGGMLARAGHEVILI-A-RPQHVQAIEATGLRLE 65 (318)
T ss_dssp ------CEEEEESCSHHHHH-HHHHHHHTTCEEEEE-C-CHHHHHHHHHHCEEEE
T ss_pred hhhccCCcEEEECcCHHHHH-HHHHHHHCCCeEEEE-E-cHhHHHHHHhCCeEEE
Confidence 45555678999999999986 578888899999998 3 3345566666676543
No 84
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=85.85 E-value=0.8 Score=46.18 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=52.8
Q ss_pred hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCHHHHHH-HHCCCCeeeHHH---HH----HHHh-cCC
Q 009279 111 SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHA-KSVGVPIYKRDY---WL----AKLT-EKY 181 (538)
Q Consensus 111 ~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~~l~~a-~~~gi~vi~~~~---~l----~~~~-~~~ 181 (538)
+.+.++.+.|..++-+-+. .+ .+.|++.++ ++ |+.++.... .+ +... -..
T Consensus 94 ~~i~~Al~~G~~Vvsglh~-~l-------------------~~~pel~~~A~~-g~~i~dvr~pp~~l~~~~g~~~~v~~ 152 (349)
T 2obn_A 94 IELKTALQAGMSLVNGLHT-PL-------------------ANIPDLNALLQP-GQLIWDVRKEPANLDVASGAARTLPC 152 (349)
T ss_dssp HHHHHHHHTTCEEEECSSS-CC-------------------TTCHHHHHHCCT-TCCEEETTCCCSSCCCCCSGGGGCSS
T ss_pred HHHHHHHHcCCcEEeCccc-hh-------------------hCCHHHHHHHHc-CCEEEEeccCcccccccccceeeecc
Confidence 4567788999998777221 11 234555543 34 666655311 00 0000 035
Q ss_pred cEEEEeCC---CCchHHHHHHHHHHHHcCCCeEE
Q 009279 182 NLIAVSGS---HGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 182 ~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
+.|.|+|| -|||+|+..|.+.|++.|+++..
T Consensus 153 k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~ 186 (349)
T 2obn_A 153 RRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKF 186 (349)
T ss_dssp EEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEcCCCccccceeHHHHHHHHHHhcCCcEEE
Confidence 78999998 49999999999999999999754
No 85
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=85.84 E-value=1 Score=43.95 Aligned_cols=117 Identities=19% Similarity=0.139 Sum_probs=66.1
Q ss_pred ceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
++++|+|.|+ .|+. +|.+|...|++|+..+.+.. .+++... .+.+++. -.+..+.. ++. ++..+|+..|+.+
T Consensus 162 k~vvVvGrs~iVG~p-lA~lL~~~gAtVtv~hs~T~-~L~~~~~-~ADIVI~Avg~p~~I~~-~~v-k~GavVIDvgi~~ 236 (286)
T 4a5o_A 162 MDAVVVGASNIVGRP-MALELLLGGCTVTVTHRFTR-DLADHVS-RADLVVVAAGKPGLVKG-EWI-KEGAIVIDVGINR 236 (286)
T ss_dssp CEEEEECTTSTTHHH-HHHHHHHTTCEEEEECTTCS-CHHHHHH-TCSEEEECCCCTTCBCG-GGS-CTTCEEEECCSCS
T ss_pred CEEEEECCCchhHHH-HHHHHHHCCCeEEEEeCCCc-CHHHHhc-cCCEEEECCCCCCCCCH-HHc-CCCeEEEEecccc
Confidence 6789999987 6886 58888889999998875332 2333222 3334332 22211211 111 4677888888876
Q ss_pred CCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 153 DNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 153 ~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
... | .+....+|-.-......+--|-|--|.=|++.++.+.++++
T Consensus 237 ~~~--------g-kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa 281 (286)
T 4a5o_A 237 QAD--------G-RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAA 281 (286)
T ss_dssp SCC--------C-CSSCSBCHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHH
T ss_pred ccc--------C-CcccCccHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHH
Confidence 310 1 12222222111111222223446689999999999998764
No 86
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.68 E-value=4.3 Score=38.92 Aligned_cols=64 Identities=23% Similarity=0.198 Sum_probs=42.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|..|.+ ++..|...|++|.++|.+. +..+.+.+.|+......+.... ..+|+|++..
T Consensus 2 ~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~------~~~D~vi~av 65 (279)
T 2f1k_A 2 KIGVVGLGLIGAS-LAGDLRRRGHYLIGVSRQQ-STCEKAVERQLVDEAGQDLSLL------QTAKIIFLCT 65 (279)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHHTTSCSEEESCGGGG------TTCSEEEECS
T ss_pred EEEEEcCcHHHHH-HHHHHHHCCCEEEEEECCH-HHHHHHHhCCCCccccCCHHHh------CCCCEEEEEC
Confidence 5889999999986 5777778999999998542 2344556667642111122111 2589999864
No 87
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.46 E-value=2.8 Score=43.70 Aligned_cols=114 Identities=20% Similarity=0.232 Sum_probs=68.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC--------------hhHH----HHHHCCCeEEeCCCCCC-cCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS--------------SYME----GLLEAGANLHIGHSVSN-IQGN 135 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~--------------~~~~----~~~~~Ga~~~~~~~~~~-~~~~ 135 (538)
..+|.|||+|--|... |..|+.+|++|.|.|.+.. +-++ +..+.|- +.+..+... +.
T Consensus 21 m~~IaViGlGYVGLp~-A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~-l~~tt~~~~ai~-- 96 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVH-AVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGR-LSFAESAEEAVA-- 96 (444)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTC-EEECSSHHHHHH--
T ss_pred CCEEEEEccCHHHHHH-HHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCC-eeEEcCHHHHHh--
Confidence 3569999999999874 6777889999999997521 1112 2222232 222211111 21
Q ss_pred CCCCCCCEEEEcCCCCC------CCHHHHHHHHCCCCeeeHHHHHHH---HhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 136 DGSRFPNAVVASSAIPQ------DNVEILHAKSVGVPIYKRDYWLAK---LTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 136 ~~~~~~d~vvvsp~i~~------~~~~l~~a~~~gi~vi~~~~~l~~---~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
..|++++..+-|. +...+..|. +-.+. +..+..+|.+--|-==+||-.++..+|.+.
T Consensus 97 ----~ad~~~I~VpTP~~~d~~~Dl~~v~~a~----------~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~ 162 (444)
T 3vtf_A 97 ----ATDATFIAVGTPPAPDGSADLRYVEAAA----------RAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEE 162 (444)
T ss_dssp ----TSSEEEECCCCCBCTTSSBCCHHHHHHH----------HHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTT
T ss_pred ----cCCceEEEecCCCCCCCCCCcHHHHHHH----------HHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHh
Confidence 4688888765542 222333332 22221 222456888888998899999888888764
No 88
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.40 E-value=6.2 Score=38.04 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=60.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhC--CCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.+|.|||.|.-|.+. |..|+.. |++|.++|.+. +..+.+.+.|+......+..... ..+|+|++... +.
T Consensus 7 ~~I~iIG~G~mG~~~-a~~l~~~g~~~~V~~~d~~~-~~~~~~~~~g~~~~~~~~~~~~~-----~~aDvVilavp--~~ 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASL-ALGIKRDHPHYKIVGYNRSD-RSRDIALERGIVDEATADFKVFA-----ALADVIILAVP--IK 77 (290)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHCTTSEEEEECSSH-HHHHHHHHTTSCSEEESCTTTTG-----GGCSEEEECSC--HH
T ss_pred ceEEEEeeCHHHHHH-HHHHHhCCCCcEEEEEcCCH-HHHHHHHHcCCcccccCCHHHhh-----cCCCEEEEcCC--HH
Confidence 469999999999875 5555555 68999998542 23445556776311111211111 25799998642 21
Q ss_pred CHHHHHHHHCCCCeeeHHHHHHHHhc---CCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 154 NVEILHAKSVGVPIYKRDYWLAKLTE---KYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~~~~~l~~~~~---~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
... +++..... +...+-|.-+++|..++..+...+..
T Consensus 78 --~~~-------------~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 78 --KTI-------------DFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp --HHH-------------HHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred --HHH-------------HHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccc
Confidence 111 11222111 12344556678888777777877754
No 89
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.33 E-value=4 Score=39.87 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 16 ~~I~VIG~G~mG~~-iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAG-IAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCeEEEEECCH
Confidence 56999999998876 5777788999999999653
No 90
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=85.25 E-value=1.4 Score=42.21 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=31.5
Q ss_pred HHHHhcCCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 174 LAKLTEKYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 174 l~~~~~~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
........++|+|+++ .||||++..|+..|.+.|++|..+
T Consensus 11 a~~l~~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~Vlli 53 (262)
T 2ph1_A 11 KERLGKIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGIL 53 (262)
T ss_dssp HHHHTTCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhhhccCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 3344445679999865 469999999999999999997654
No 91
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.24 E-value=1.1 Score=39.05 Aligned_cols=72 Identities=22% Similarity=0.187 Sum_probs=45.6
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHH-HCCCeEEeCCCC--CCcCCCCCCCCCCEEEEcCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLL-EAGANLHIGHSV--SNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~-~~Ga~~~~~~~~--~~~~~~~~~~~~d~vvvsp~ 149 (538)
..+|+|+|.|..|... +..|...|++|.+.|.+.. ..+.+. +.|+.++.+... ..+.. .....+|+|+...+
T Consensus 19 ~~~v~IiG~G~iG~~l-a~~L~~~g~~V~vid~~~~-~~~~~~~~~g~~~~~~d~~~~~~l~~-~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLI-ANLASSSGHSVVVVDKNEY-AFHRLNSEFSGFTVVGDAAEFETLKE-CGMEKADMVFAFTN 93 (155)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCGG-GGGGSCTTCCSEEEESCTTSHHHHHT-TTGGGCSEEEECSS
T ss_pred CCcEEEECCCHHHHHH-HHHHHhCCCeEEEEECCHH-HHHHHHhcCCCcEEEecCCCHHHHHH-cCcccCCEEEEEeC
Confidence 4579999999999975 6777889999999986432 233444 557766554321 11110 00125788888754
No 92
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=85.15 E-value=1.3 Score=44.45 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=63.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|+..|.+|.++|..... ..+.+.|+... ..+++. ...|+|++.....+...
T Consensus 166 ~tvgIIGlG~IG~~v-A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~l~ell-----~~aDvV~l~~P~t~~t~ 234 (335)
T 2g76_A 166 KTLGILGLGRIGREV-ATRMQSFGMKTIGYDPIISP--EVSASFGVQQL---PLEEIW-----PLCDFITVHTPLLPSTT 234 (335)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEECSSSCH--HHHHHTTCEEC---CHHHHG-----GGCSEEEECCCCCTTTT
T ss_pred CEEEEEeECHHHHHH-HHHHHHCCCEEEEECCCcch--hhhhhcCceeC---CHHHHH-----hcCCEEEEecCCCHHHH
Confidence 469999999999985 77788899999999965443 24556787541 111211 25788888542222111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.++.. +.+... ++..++--+|+ |.--...-+...|+..
T Consensus 235 ----------~li~~-~~l~~m-k~gailIN~ar-g~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 235 ----------GLLND-NTFAQC-KKGVRVVNCAR-GGIVDEGALLRALQSG 272 (335)
T ss_dssp ----------TSBCH-HHHTTS-CTTEEEEECSC-TTSBCHHHHHHHHHHT
T ss_pred ----------HhhCH-HHHhhC-CCCcEEEECCC-ccccCHHHHHHHHHhC
Confidence 11221 223222 23345555666 7665556666677764
No 93
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.14 E-value=12 Score=36.80 Aligned_cols=68 Identities=18% Similarity=0.248 Sum_probs=42.0
Q ss_pred eEEEEeechhhHHHHHHHHHhC--CCcEEEecCCCChhHHH----HHH------CCCeEEeCCCCCCcCCCCCCCCCCEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLVWSSYMEG----LLE------AGANLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~~~~~~~~----~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
+|.|+|.|..|.+. |..|+.+ |++|.+.|.+... ++. +.. ....+....+...+ +.+|+|
T Consensus 2 kI~VIGaG~vG~~l-a~~la~~~~g~~V~l~D~~~~~-~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l------~~aDvV 73 (310)
T 1guz_A 2 KITVIGAGNVGATT-AFRLAEKQLARELVLLDVVEGI-PQGKALDMYESGPVGLFDTKVTGSNDYADT------ANSDIV 73 (310)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCSEEEEECSSSSH-HHHHHHHHHTTHHHHTCCCEEEEESCGGGG------TTCSEE
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCCCEEEEEeCChhH-HHHHHHhHHhhhhcccCCcEEEECCCHHHH------CCCCEE
Confidence 58899999999874 6666664 8999999976542 211 111 12223222232233 268999
Q ss_pred EEcCCCCC
Q 009279 145 VASSAIPQ 152 (538)
Q Consensus 145 vvsp~i~~ 152 (538)
|+..+.|.
T Consensus 74 iiav~~p~ 81 (310)
T 1guz_A 74 IITAGLPR 81 (310)
T ss_dssp EECCSCCC
T ss_pred EEeCCCCC
Confidence 99877654
No 94
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=85.07 E-value=0.88 Score=43.48 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=30.5
Q ss_pred cCCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 179 EKYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 179 ~~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+..+.|-|||| .|||+++.-|.+.|++.|++|..+
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 35689999999 699999999999999999997654
No 95
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.93 E-value=1 Score=44.66 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=64.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|...|.+|.++|..... ..+.+.|+... +..++. ...|+|+......+..
T Consensus 143 ~~vgIIG~G~IG~~~-A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~l~ell-----~~aDvVvl~~P~~~~t- 210 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKV-GIIANAMGMKVLAYDILDIR--EKAEKINAKAV---SLEELL-----KNSDVISLHVTVSKDA- 210 (313)
T ss_dssp CEEEEESCSHHHHHH-HHHHHHTTCEEEEECSSCCH--HHHHHTTCEEC---CHHHHH-----HHCSEEEECCCCCTTS-
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEECCCcch--hHHHhcCceec---CHHHHH-----hhCCEEEEeccCChHH-
Confidence 569999999999985 77777899999999976543 23556787641 111111 1478888754221211
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
..++.. +.+... ++..++--+|+ |.--...-+...|++.+
T Consensus 211 ---------~~li~~-~~l~~m-k~ga~lIn~ar-g~~vd~~aL~~aL~~g~ 250 (313)
T 2ekl_A 211 ---------KPIIDY-PQFELM-KDNVIIVNTSR-AVAVNGKALLDYIKKGK 250 (313)
T ss_dssp ---------CCSBCH-HHHHHS-CTTEEEEESSC-GGGBCHHHHHHHHHTTC
T ss_pred ---------HHhhCH-HHHhcC-CCCCEEEECCC-CcccCHHHHHHHHHcCC
Confidence 112221 233332 33345555555 77666667777787643
No 96
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.47 E-value=1.1 Score=44.91 Aligned_cols=106 Identities=15% Similarity=0.139 Sum_probs=61.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|+..|.+|.++|..... +.+.+.|+.. . +...+. ...|+|++.....+...
T Consensus 147 ~~vgIIG~G~iG~~v-A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~--~-~l~e~l-----~~aDiVil~vp~~~~t~ 215 (333)
T 2d0i_A 147 KKVGILGMGAIGKAI-ARRLIPFGVKLYYWSRHRKV--NVEKELKARY--M-DIDELL-----EKSDIVILALPLTRDTY 215 (333)
T ss_dssp CEEEEECCSHHHHHH-HHHHGGGTCEEEEECSSCCH--HHHHHHTEEE--C-CHHHHH-----HHCSEEEECCCCCTTTT
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEECCCcch--hhhhhcCcee--c-CHHHHH-----hhCCEEEEcCCCChHHH
Confidence 569999999999974 77778899999999976543 3344556543 1 111111 14788888543221111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.++.. +.+... +.. ++ |--+.|......-+...|+..
T Consensus 216 ----------~~i~~-~~~~~m-k~g-il-in~srg~~vd~~aL~~aL~~~ 252 (333)
T 2d0i_A 216 ----------HIINE-ERVKKL-EGK-YL-VNIGRGALVDEKAVTEAIKQG 252 (333)
T ss_dssp ----------TSBCH-HHHHHT-BTC-EE-EECSCGGGBCHHHHHHHHHTT
T ss_pred ----------HHhCH-HHHhhC-CCC-EE-EECCCCcccCHHHHHHHHHcC
Confidence 12221 233333 333 44 544567666666666777764
No 97
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=84.10 E-value=1.1 Score=41.93 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=27.4
Q ss_pred cEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 182 NLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 182 ~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
++|+|+++ .||||++..++..|.+.|++|..+
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~Vlli 37 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAV 37 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEE
Confidence 68888865 589999999999999999997654
No 98
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=83.95 E-value=1.5 Score=38.05 Aligned_cols=51 Identities=14% Similarity=0.052 Sum_probs=36.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChh---HHHHHHCCCeEEeCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSY---MEGLLEAGANLHIGH 127 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~---~~~~~~~Ga~~~~~~ 127 (538)
++|+|+|.|..|... +..|...|++|.+.|.+..+. +......|..++.++
T Consensus 4 ~~vlI~G~G~vG~~l-a~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd 57 (153)
T 1id1_A 4 DHFIVCGHSILAINT-ILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGD 57 (153)
T ss_dssp SCEEEECCSHHHHHH-HHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESC
T ss_pred CcEEEECCCHHHHHH-HHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcC
Confidence 568899999999874 677777999999999653332 223334577777663
No 99
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=83.85 E-value=0.63 Score=48.91 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|.|||.|.+|++| |.+|++.|++|.+.+..
T Consensus 2 k~VvVIGaG~~GL~a-A~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 2 KPTTVIGAGFGGLAL-AIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCEEEECCHHHHHHH-HHHHHHTTCCEEEECCC
T ss_pred CCEEEECCcHHHHHH-HHHHHHCCCcEEEEccC
Confidence 468899999999998 77889999999998743
No 100
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=83.76 E-value=1.4 Score=44.43 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=36.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
.++|.|||+|..|.+ +|..|+..|++|.++|.+. +..+.+.+.|+..
T Consensus 8 ~~kIgIIG~G~mG~s-lA~~L~~~G~~V~~~dr~~-~~~~~a~~~G~~~ 54 (341)
T 3ktd_A 8 SRPVCILGLGLIGGS-LLRDLHAANHSVFGYNRSR-SGAKSAVDEGFDV 54 (341)
T ss_dssp SSCEEEECCSHHHHH-HHHHHHHTTCCEEEECSCH-HHHHHHHHTTCCE
T ss_pred CCEEEEEeecHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHHcCCee
Confidence 467999999999997 5788888999999999543 3455677788854
No 101
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.59 E-value=1.6 Score=43.55 Aligned_cols=109 Identities=14% Similarity=0.118 Sum_probs=62.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |..|+..|.+|.++|.+... .+.+.+.|+... +...+. ...|+|+......+...
T Consensus 156 ~~vgIIG~G~iG~~i-A~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~---~l~e~l-----~~aDvVi~~vp~~~~t~ 225 (330)
T 2gcg_A 156 STVGIIGLGRIGQAI-ARRLKPFGVQRFLYTGRQPR-PEEAAEFQAEFV---STPELA-----AQSDFIVVACSLTPATE 225 (330)
T ss_dssp CEEEEECCSHHHHHH-HHHHGGGTCCEEEEESSSCC-HHHHHTTTCEEC---CHHHHH-----HHCSEEEECCCCCTTTT
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEECCCCcc-hhHHHhcCceeC---CHHHHH-----hhCCEEEEeCCCChHHH
Confidence 469999999999975 67777899999999965431 233445566542 111111 14788887542221111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
.++. .+.+... ++. .+-|--+.|+-.+..-+.+.|+..+
T Consensus 226 ----------~~i~-~~~~~~m-k~g-ailIn~srg~~v~~~aL~~aL~~~~ 264 (330)
T 2gcg_A 226 ----------GLCN-KDFFQKM-KET-AVFINISRGDVVNQDDLYQALASGK 264 (330)
T ss_dssp ----------TCBS-HHHHHHS-CTT-CEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred ----------HhhC-HHHHhcC-CCC-cEEEECCCCcccCHHHHHHHHHcCC
Confidence 1121 1233322 222 3446666777666666677777744
No 102
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=83.01 E-value=0.98 Score=43.08 Aligned_cols=34 Identities=35% Similarity=0.428 Sum_probs=28.9
Q ss_pred CCcEEEEeCCC---CchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSGSH---GKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTGTn---GKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
..++|+|+++. ||||++..++..|...|++|..+
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~Vlli 41 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLV 41 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEE
Confidence 46899999655 79999999999999999997654
No 103
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=82.95 E-value=3 Score=40.38 Aligned_cols=62 Identities=18% Similarity=0.144 Sum_probs=40.4
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEc
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS 147 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvs 147 (538)
.++++|+|.|+.|+++ +..|+..|.+|.+.+.+.+. .+++.+.|+.... .+++. .+|+||-.
T Consensus 118 ~k~vlvlGaGGaarai-a~~L~~~G~~v~V~nRt~~k-a~~la~~~~~~~~---~~~l~------~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGAGGSAKAL-ACELKKQGLQVSVLNRSSRG-LDFFQRLGCDCFM---EPPKS------AFDLIINA 179 (269)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCTT-HHHHHHHTCEEES---SCCSS------CCSEEEEC
T ss_pred CCEEEEECCCHHHHHH-HHHHHHCCCEEEEEeCCHHH-HHHHHHCCCeEec---HHHhc------cCCEEEEc
Confidence 4679999999999986 55666788999999866443 3333355654431 11121 47888853
No 104
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=82.61 E-value=1.1 Score=42.11 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=28.8
Q ss_pred CCcEEEEe---CCCCchHHHHHHHHHHHHc-CCCeEEE
Q 009279 180 KYNLIAVS---GSHGKSTTASMLAYVLKAM-GDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VT---GTnGKTTTt~ml~~iL~~~-G~~v~~~ 213 (538)
..++|+|+ |-.||||++..++..|... |++|..+
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~Vlli 40 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAV 40 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEE
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEE
Confidence 46799998 4567999999999999998 9997654
No 105
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.40 E-value=4.9 Score=38.89 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=43.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC---cEEEecCCCChhHHHHHHC-CCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF---EVSGSDLVWSSYMEGLLEA-GANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~---~v~g~D~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|.-|.+ ++..|...|+ +|.++|.+. +..+.+.+. |+..... ..+.+. .+|+|++..
T Consensus 4 ~~I~iIG~G~mG~a-ia~~l~~~g~~~~~V~v~dr~~-~~~~~l~~~~gi~~~~~-~~~~~~------~aDvVilav 71 (280)
T 3tri_A 4 SNITFIGGGNMARN-IVVGLIANGYDPNRICVTNRSL-DKLDFFKEKCGVHTTQD-NRQGAL------NADVVVLAV 71 (280)
T ss_dssp SCEEEESCSHHHHH-HHHHHHHTTCCGGGEEEECSSS-HHHHHHHHTTCCEEESC-HHHHHS------SCSEEEECS
T ss_pred CEEEEEcccHHHHH-HHHHHHHCCCCCCeEEEEeCCH-HHHHHHHHHcCCEEeCC-hHHHHh------cCCeEEEEe
Confidence 46999999999986 5677777898 999998543 345556554 8765321 111122 579999865
No 106
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.35 E-value=4.7 Score=39.78 Aligned_cols=44 Identities=27% Similarity=0.234 Sum_probs=34.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
.+|+|+|.|..|.+ +|..|+..|++|...+... . +.+.+.|..+
T Consensus 3 mkI~IiGaGaiG~~-~a~~L~~~g~~V~~~~r~~--~-~~i~~~Gl~~ 46 (320)
T 3i83_A 3 LNILVIGTGAIGSF-YGALLAKTGHCVSVVSRSD--Y-ETVKAKGIRI 46 (320)
T ss_dssp CEEEEESCCHHHHH-HHHHHHHTTCEEEEECSTT--H-HHHHHHCEEE
T ss_pred CEEEEECcCHHHHH-HHHHHHhCCCeEEEEeCCh--H-HHHHhCCcEE
Confidence 46899999999985 5788888999999998643 2 5566667654
No 107
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=82.29 E-value=1.5 Score=42.48 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=29.3
Q ss_pred cCCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEE
Q 009279 179 EKYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 179 ~~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
+..++|.||++ -||||++.-|+..|.+.|++|..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLL 116 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLI 116 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEE
Confidence 35689999965 68999999999999999998654
No 108
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=82.13 E-value=9.7 Score=37.55 Aligned_cols=67 Identities=30% Similarity=0.372 Sum_probs=41.6
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChhHHHHH---HC------CCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSYMEGLL---EA------GANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~~~~~~---~~------Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
+|.|||.|..|.+ +|..|+..|. +|.+.|.+.. .++.+. .. ...+... +...+ +.+|+||
T Consensus 2 kI~VIGaG~~G~~-la~~l~~~g~~~~V~l~D~~~~-~~~~~~~~l~~~~~~~~~~~i~~~-d~~~~------~~aDvVi 72 (319)
T 1a5z_A 2 KIGIVGLGRVGSS-TAFALLMKGFAREMVLIDVDKK-RAEGDALDLIHGTPFTRRANIYAG-DYADL------KGSDVVI 72 (319)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSSHH-HHHHHHHHHHHHGGGSCCCEEEEC-CGGGG------TTCSEEE
T ss_pred EEEEECCCHHHHH-HHHHHHhCCCCCeEEEEeCChH-HHHHHHHHHHhhhhhcCCcEEEeC-CHHHh------CCCCEEE
Confidence 5899999999987 4666777898 9999996532 122111 11 2233322 22222 2689999
Q ss_pred EcCCCCC
Q 009279 146 ASSAIPQ 152 (538)
Q Consensus 146 vsp~i~~ 152 (538)
+..+.+.
T Consensus 73 iav~~~~ 79 (319)
T 1a5z_A 73 VAAGVPQ 79 (319)
T ss_dssp ECCCCCC
T ss_pred EccCCCC
Confidence 9877654
No 109
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.69 E-value=6.7 Score=40.66 Aligned_cols=31 Identities=35% Similarity=0.346 Sum_probs=26.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||+|.-|.+ +|..|+. |++|.++|.+
T Consensus 37 mkIaVIGlG~mG~~-lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLS-NGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHH-HHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHH-HHHHHHc-CCeEEEEecC
Confidence 46999999999986 4677776 9999999965
No 110
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=81.57 E-value=1.5 Score=43.21 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=29.3
Q ss_pred CCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
..++|.||++ -||||++.-|+..|.+.|++|..+
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLI 139 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI 139 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 4689999986 589999999999999999986543
No 111
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=81.36 E-value=0.62 Score=40.23 Aligned_cols=67 Identities=9% Similarity=0.065 Sum_probs=40.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
++|+|+|.|..|... +..|+..|.+|.++|.+.. ..+. +.+.|+......+..... ..+|+|+...+
T Consensus 22 ~~v~iiG~G~iG~~~-a~~l~~~g~~v~v~~r~~~-~~~~~a~~~~~~~~~~~~~~~~~-----~~~Divi~at~ 89 (144)
T 3oj0_A 22 NKILLVGNGMLASEI-APYFSYPQYKVTVAGRNID-HVRAFAEKYEYEYVLINDIDSLI-----KNNDVIITATS 89 (144)
T ss_dssp CEEEEECCSHHHHHH-GGGCCTTTCEEEEEESCHH-HHHHHHHHHTCEEEECSCHHHHH-----HTCSEEEECSC
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCEEEEEcCCHH-HHHHHHHHhCCceEeecCHHHHh-----cCCCEEEEeCC
Confidence 579999999999975 5666678999999986432 2222 234465543322211111 14677777543
No 112
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.30 E-value=2.5 Score=41.46 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=42.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.++|.|+|.|..|+++ |+.|...|.+|.++|.... ..+.+.+.|+...-.....+.. ..+|+|+...
T Consensus 157 g~~v~IiG~G~iG~~~-a~~l~~~G~~V~~~d~~~~-~~~~~~~~g~~~~~~~~l~~~l-----~~aDvVi~~~ 223 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTI-ARTFAALGANVKVGARSSA-HLARITEMGLVPFHTDELKEHV-----KDIDICINTI 223 (300)
T ss_dssp TSEEEEECCSHHHHHH-HHHHHHTTCEEEEEESSHH-HHHHHHHTTCEEEEGGGHHHHS-----TTCSEEEECC
T ss_pred CCEEEEEcccHHHHHH-HHHHHHCCCEEEEEECCHH-HHHHHHHCCCeEEchhhHHHHh-----hCCCEEEECC
Confidence 3579999999999986 5666778999999995432 2233445677643111111111 2578888754
No 113
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=80.96 E-value=1.3 Score=43.38 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=28.9
Q ss_pred cCCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEE
Q 009279 179 EKYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 179 ~~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
.+.++|.||++ .||||++.-|+..|.+.|++|..
T Consensus 90 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLL 126 (286)
T 3la6_A 90 AQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLL 126 (286)
T ss_dssp TTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEE
Confidence 35689999976 58999999999999999998643
No 114
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=80.49 E-value=4.2 Score=44.67 Aligned_cols=125 Identities=22% Similarity=0.164 Sum_probs=73.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC---------------h-------hHHHHHHCCCeEEeCCCCCCc
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS---------------S-------YMEGLLEAGANLHIGHSVSNI 132 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~---------------~-------~~~~~~~~Ga~~~~~~~~~~~ 132 (538)
.++|+|||.|.+|++| |..|+.+|++|...|.... + +...+.+.|+.+..+......
T Consensus 373 ~~~vvIIGgG~AGl~a-A~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~ 451 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAF-AINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTAD 451 (671)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSS
T ss_pred CCeEEEECCCHHHHHH-HHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHH
Confidence 3579999999999987 7778889999999985310 1 112344568888776543211
Q ss_pred CCCCCCCCCCEEEEcCCCCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 133 QGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 133 ~~~~~~~~~d~vvvsp~i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
. ...+|.+|+..|..+..|.+.-. + .-.+++..+++.......+.|.|-|. +-+..=++..|...|.+
T Consensus 452 ~----~~~~d~lviAtG~~p~~~~i~G~-~-~~~v~~~~~~l~~~~~~~~~VvVIGg---G~~g~E~A~~l~~~G~~ 519 (671)
T 1ps9_A 452 Q----LQAFDETILASGIVPRTPPIDGI-D-HPKVLSYLDVLRDKAPVGNKVAIIGC---GGIGFDTAMYLSQPGES 519 (671)
T ss_dssp S----SCCSSEEEECCCEEECCCCCBTT-T-STTEEEHHHHHTSCCCCCSEEEEECC---HHHHHHHHHHHTCCSSC
T ss_pred H----hhcCCEEEEccCCCcCCCCCCCC-C-CCcEeeHHHHhhCCCCCCCeEEEECC---ChhHHHHHHHHHhcCCC
Confidence 1 01479999988864433321100 0 11356655554332222345555543 45555567777777754
No 115
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=80.47 E-value=1.6 Score=41.53 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=27.0
Q ss_pred cEEEEeC---CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 182 NLIAVSG---SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 182 ~vI~VTG---TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
++|+|++ -.||||++..++..|...|++|..+
T Consensus 3 ~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~Vlli 37 (263)
T 1hyq_A 3 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIV 37 (263)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 5788875 4589999999999999999997654
No 116
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.24 E-value=7.9 Score=40.73 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 6 ~kVgVIGaG~MG~~-IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAG-IAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHH-HHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHH-HHHHHHHCCCeEEEEECCH
Confidence 46999999988886 5777888999999999653
No 117
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=80.21 E-value=11 Score=39.48 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=28.2
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+.+|.|||+|--|.+ +|..|+..|++|.++|.+
T Consensus 8 ~~~I~VIG~G~vG~~-lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLV-TGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHH-HHHHHHhCCCEEEEEECC
Confidence 457999999999986 577888899999999964
No 118
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=80.03 E-value=7.2 Score=38.02 Aligned_cols=33 Identities=27% Similarity=0.201 Sum_probs=27.8
Q ss_pred ceEEEEe-echhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVG-IGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG-~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.||| .|..|.+ +|..|+..|++|.++|.+.
T Consensus 22 ~~I~iIGg~G~mG~~-la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGL-FARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHH-HHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHH-HHHHHHhCCCeEEEEECCc
Confidence 4699999 9999986 5788888999999998543
No 119
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=80.01 E-value=4.2 Score=39.97 Aligned_cols=45 Identities=24% Similarity=0.191 Sum_probs=34.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|..|.+ +|..|+..|++|...+... .+.+.+.|..+.
T Consensus 3 mkI~IiGaGaiG~~-~a~~L~~~g~~V~~~~r~~---~~~i~~~g~~~~ 47 (312)
T 3hn2_A 3 LRIAIVGAGALGLY-YGALLQRSGEDVHFLLRRD---YEAIAGNGLKVF 47 (312)
T ss_dssp -CEEEECCSTTHHH-HHHHHHHTSCCEEEECSTT---HHHHHHTCEEEE
T ss_pred CEEEEECcCHHHHH-HHHHHHHCCCeEEEEEcCc---HHHHHhCCCEEE
Confidence 35899999999986 5777888999999998643 366667786653
No 120
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=79.96 E-value=1.8 Score=40.84 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=27.3
Q ss_pred cEEEEeC---CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 182 NLIAVSG---SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 182 ~vI~VTG---TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
++|+|++ -.||||++..++..|...|++|..+
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~Vlli 37 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVI 37 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEE
Confidence 6888875 4579999999999999999997654
No 121
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=79.94 E-value=3 Score=38.49 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=45.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHH-HCCCeEEeCCCCC--CcCCCCCCCCCCEEEEcCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLL-EAGANLHIGHSVS--NIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~-~~Ga~~~~~~~~~--~~~~~~~~~~~d~vvvsp~ 149 (538)
+|.|+|.|..|... |..|...|++|.+.|.++. .++.+. +.|..++.+.... .+.. .....+|.+++..+
T Consensus 2 ~iiIiG~G~~G~~l-a~~L~~~g~~v~vid~~~~-~~~~l~~~~~~~~i~gd~~~~~~l~~-a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYL-ARSMLSRKYGVVIINKDRE-LCEEFAKKLKATIIHGDGSHKEILRD-AEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECCHHHHHHH-HHHHHHTTCCEEEEESCHH-HHHHHHHHSSSEEEESCTTSHHHHHH-HTCCTTCEEEECCS
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCeEEEEECCHH-HHHHHHHHcCCeEEEcCCCCHHHHHh-cCcccCCEEEEecC
Confidence 47899999999975 6777889999999995432 334443 4588877764321 1110 01135888888754
No 122
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=79.83 E-value=6.2 Score=41.48 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=25.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhC--CCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~ 108 (538)
.+|.|||+|.-|.+. |..|+.. |++|.++|.+
T Consensus 10 mkI~VIG~G~vG~~~-A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPT-CAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHH-HHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHH-HHHHHhcCCCCEEEEEECC
Confidence 469999999999875 5555666 7999999964
No 123
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=79.79 E-value=1.7 Score=42.19 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=26.5
Q ss_pred CcEEEEeC-----CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVSG-----SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VTG-----TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
.++|.|++ -.||||++..|+..|...|++|..+
T Consensus 34 ~~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlli 71 (298)
T 2oze_A 34 NEAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMI 71 (298)
T ss_dssp CSCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEE
Confidence 34566654 5899999999999999999997543
No 124
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.59 E-value=2.8 Score=40.64 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=42.1
Q ss_pred ceEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||. |..|.+ +|..|+..|++|.++|.+. +..+.+.+.|+.. ....+.+ ..+|+|++..
T Consensus 12 m~I~iIG~tG~mG~~-la~~l~~~g~~V~~~~r~~-~~~~~~~~~g~~~--~~~~~~~------~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGAR-ITRKIHDSAHHLAAIEIAP-EGRDRLQGMGIPL--TDGDGWI------DEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHSSSEEEEECCSH-HHHHHHHHTTCCC--CCSSGGG------GTCSEEEECS
T ss_pred CEEEEECCCCHHHHH-HHHHHHhCCCEEEEEECCH-HHHHHHHhcCCCc--CCHHHHh------cCCCEEEEcC
Confidence 36999999 999987 5677778999999998542 2344555567543 1111112 2589999864
No 125
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=79.48 E-value=2 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=27.3
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCCeE
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDDLT 211 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~ 211 (538)
...+|+|+|.| |||||+..|+..|...|.++.
T Consensus 104 ~~~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVl 137 (320)
T 1zu4_A 104 RLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVL 137 (320)
T ss_dssp SCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEE
Confidence 35699999876 799999999999999888754
No 126
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=79.35 E-value=2 Score=42.06 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=28.9
Q ss_pred CCcEEEEeC--CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSG--SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTG--TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
..++|+|+| -.||||++.-++..|.+.|++|..+
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~Vlli 75 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQI 75 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence 567899984 5689999999999999999997654
No 127
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=79.27 E-value=3.4 Score=40.10 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=67.8
Q ss_pred ceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++++|+|.|+ .|+. +|.+|...|++|+..+.+.....+.+.+..+.+...-.+..+.. ++. ++..+|+..|+++.+
T Consensus 151 k~vvVvG~s~iVG~p-lA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~-~~v-k~GavVIDvgi~~~~ 227 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRP-LSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNR-EMV-TPGSVVIDVGINYVN 227 (276)
T ss_dssp CEEEEECCCTTTHHH-HHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCG-GGC-CTTCEEEECCCEEET
T ss_pred CEEEEEcCChHHHHH-HHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccH-hhc-cCCcEEEEeccCccC
Confidence 6689999986 6876 57888889999999875433222334443433322222211211 111 456788888887511
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
| .+....+|-.-......+--|-|--|.=|++.++.+.++++
T Consensus 228 ---------g-kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~n~v~a~ 269 (276)
T 3ngx_A 228 ---------D-KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAA 269 (276)
T ss_dssp ---------T-EEECSBCHHHHHTTSSEECCTTTSSHHHHHHHHHHHHHHHH
T ss_pred ---------C-ceeccccHHHHhhhceEeCCCCCcChHHHHHHHHHHHHHHH
Confidence 1 23333333221111222223447889999999999999764
No 128
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.21 E-value=2 Score=40.00 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=41.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEE-ecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSG-SDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g-~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|.-|.+ +|..|+..|++|.+ .|.+.+ .++.+ .+.|+..... ..+.+. .+|+|++..
T Consensus 24 mkI~IIG~G~mG~~-la~~l~~~g~~V~~v~~r~~~-~~~~l~~~~g~~~~~~-~~~~~~------~aDvVilav 89 (220)
T 4huj_A 24 TTYAIIGAGAIGSA-LAERFTAAQIPAIIANSRGPA-SLSSVTDRFGASVKAV-ELKDAL------QADVVILAV 89 (220)
T ss_dssp CCEEEEECHHHHHH-HHHHHHHTTCCEEEECTTCGG-GGHHHHHHHTTTEEEC-CHHHHT------TSSEEEEES
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCEEEEEECCCHH-HHHHHHHHhCCCcccC-hHHHHh------cCCEEEEeC
Confidence 45899999999986 57777788999999 885533 33333 3346654332 111122 578888864
No 129
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.03 E-value=3.6 Score=39.07 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=40.8
Q ss_pred eEEEEeechhhHHHHHHHHHhCC-CcEEEecCCCChhHHHHHH-CCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQG-FEVSGSDLVWSSYMEGLLE-AGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|.-|.+ ++..|+..| ++|.++|.+. +..+.+.+ .|+.+.-. ..+. . .+|+|++..
T Consensus 2 ~i~iiG~G~mG~~-~a~~l~~~g~~~v~~~~r~~-~~~~~~~~~~g~~~~~~--~~~~-----~-~~D~vi~~v 65 (263)
T 1yqg_A 2 NVYFLGGGNMAAA-VAGGLVKQGGYRIYIANRGA-EKRERLEKELGVETSAT--LPEL-----H-SDDVLILAV 65 (263)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHCSCEEEEECSSH-HHHHHHHHHTCCEEESS--CCCC-----C-TTSEEEECS
T ss_pred EEEEECchHHHHH-HHHHHHHCCCCeEEEECCCH-HHHHHHHHhcCCEEeCC--HHHH-----h-cCCEEEEEe
Confidence 5899999999986 566677789 9999998542 23444544 38765321 1111 1 479999864
No 130
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=78.68 E-value=9.8 Score=37.25 Aligned_cols=32 Identities=25% Similarity=0.095 Sum_probs=27.1
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC--cEEEecCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVW 109 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~ 109 (538)
+|.|+|.|..|.+ +|..|+.+|. +|...|.+.
T Consensus 2 kI~VIGaG~vG~~-la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGST-AAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCCH
Confidence 6899999999987 5777888898 999999753
No 131
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=78.66 E-value=6.9 Score=38.81 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=45.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHHH----HC--CCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGLL----EA--GANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~~----~~--Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
.+|.|+|.|..|.+ +|..|+.+|. +|...|.+...- ..++. .. ...+....+.+.+ +.+|+||
T Consensus 5 ~kI~VIGaG~vG~~-ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al------~~aD~Vi 77 (322)
T 1t2d_A 5 AKIVLVGSGMIGGV-MATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDL------AGADVVI 77 (322)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHh------CCCCEEE
Confidence 47999999999998 6888888998 899999765411 11111 11 2233332222333 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
...++|..
T Consensus 78 ~a~g~p~k 85 (322)
T 1t2d_A 78 VTAGFTKA 85 (322)
T ss_dssp ECCSCSSC
T ss_pred EeCCCCCC
Confidence 99877653
No 132
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=78.56 E-value=1.9 Score=41.87 Aligned_cols=33 Identities=36% Similarity=0.406 Sum_probs=27.9
Q ss_pred CcEEEEe---CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVS---GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
.++|+|+ |-.||||++..|+..|...|++|..+
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~Vlli 39 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVI 39 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 3589998 45689999999999999999997544
No 133
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=78.55 E-value=2.1 Score=43.11 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=63.8
Q ss_pred ceEEEEeechhhHHHHHHHHH-hCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLAL-KQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~-~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|||+|..|.+. |+.++ ..|.+|.++|..... .+.+.+.|+... .+...+. ...|+|++.. |.+
T Consensus 164 ~~vgIIG~G~IG~~v-A~~l~~~~G~~V~~~d~~~~~-~~~~~~~g~~~~--~~l~ell-----~~aDvVil~v--p~~- 231 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEI-ARKAVHGLGMKLVYYDVAPAD-AETEKALGAERV--DSLEELA-----RRSDCVSVSV--PYM- 231 (348)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCCEEEEECSSCCC-HHHHHHHTCEEC--SSHHHHH-----HHCSEEEECC--CCS-
T ss_pred CEEEEEEECHHHHHH-HHHHHHhcCCEEEEECCCCcc-hhhHhhcCcEEe--CCHHHHh-----ccCCEEEEeC--CCC-
Confidence 569999999999975 67777 899999999965432 222344576542 1211111 1478888853 222
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
+... .++.. +.+... ++ ..+-|--+.|+-....-+...|+.
T Consensus 232 ~~t~-------~li~~-~~l~~m-k~-gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 232 KLTH-------HLIDE-AFFAAM-KP-GSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp GGGT-------TCBCH-HHHHHS-CT-TEEEEECSCGGGBCHHHHHHHHHT
T ss_pred hHHH-------HHhhH-HHHhcC-CC-CCEEEECCCCchhCHHHHHHHHHh
Confidence 1111 12221 233322 22 345577778887777777778876
No 134
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=78.53 E-value=2.2 Score=41.31 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=27.1
Q ss_pred CcEEEEe--CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVS--GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VT--GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+++|+|+ |-.||||++.-|+..|.+.|++|..+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlli 36 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 3566666 56799999999999999999997544
No 135
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.44 E-value=2.4 Score=42.18 Aligned_cols=46 Identities=24% Similarity=0.202 Sum_probs=35.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|.|||.|.-|.+ +|..|+..|++|.+.|.. +..+.+.+.|..+.
T Consensus 4 mkI~IiGaG~~G~~-~a~~L~~~g~~V~~~~r~--~~~~~~~~~g~~~~ 49 (335)
T 3ghy_A 4 TRICIVGAGAVGGY-LGARLALAGEAINVLARG--ATLQALQTAGLRLT 49 (335)
T ss_dssp CCEEEESCCHHHHH-HHHHHHHTTCCEEEECCH--HHHHHHHHTCEEEE
T ss_pred CEEEEECcCHHHHH-HHHHHHHCCCEEEEEECh--HHHHHHHHCCCEEe
Confidence 46899999999986 577788899999999853 34566777787653
No 136
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=78.20 E-value=8.5 Score=37.14 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=25.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCC-CcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~~ 108 (538)
.++++|+|.|+++++++..+ +..| .++...+..
T Consensus 125 ~~~~lilGaGGaarai~~aL-~~~g~~~i~i~nRt 158 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYAL-AEAGIASITLCDPS 158 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSC
T ss_pred cCeEEEEecHHHHHHHHHHH-HHhCCCeEEEeCCC
Confidence 45799999999999876554 5566 578888754
No 137
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=78.05 E-value=3.3 Score=41.47 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=64.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|...|.+|.++|...... ..+.|+...- .+++. ...|+|++..-..+...
T Consensus 142 ~tvgIiG~G~IG~~v-A~~l~~~G~~V~~~d~~~~~~---~~~~g~~~~~---l~ell-----~~aDvV~l~~P~t~~t~ 209 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRV-AMYGLAFGMKVLCYDVVKRED---LKEKGCVYTS---LDELL-----KESDVISLHVPYTKETH 209 (334)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCHH---HHHTTCEECC---HHHHH-----HHCSEEEECCCCCTTTT
T ss_pred ceEEEECcCHHHHHH-HHHHHHCcCEEEEECCCcchh---hHhcCceecC---HHHHH-----hhCCEEEEeCCCChHHH
Confidence 569999999999985 777788999999999654432 2245665421 11111 14788887532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.++.. +.+... +...|-|--+.|+--...-|...|+..
T Consensus 210 ----------~li~~-~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 210 ----------HMINE-ERISLM--KDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp ----------TCBCH-HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred ----------HhhCH-HHHhhC--CCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 12222 333333 234677777778887777778888654
No 138
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=77.92 E-value=2.1 Score=40.85 Aligned_cols=32 Identities=38% Similarity=0.511 Sum_probs=25.9
Q ss_pred cEEEEe--CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 182 NLIAVS--GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 182 ~vI~VT--GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
++|+|. |-.||||++..|+..|...|++|..+
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~Vlli 35 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVV 35 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 456665 56789999999999999999997543
No 139
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=77.72 E-value=30 Score=32.62 Aligned_cols=69 Identities=17% Similarity=0.117 Sum_probs=46.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
++|+|.|.|..|... +..|..+|++|.+.+.+.. ....+...++.++.++-.+ +. ...+|.||-.-+..
T Consensus 6 ~~ilVtGaG~iG~~l-~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~D~~d-~~----~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGHGYTARVL-SRALAPQGWRIIGTSRNPD-QMEAIRASGAEPLLWPGEE-PS----LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETCCHHHHHH-HHHHGGGTCEEEEEESCGG-GHHHHHHTTEEEEESSSSC-CC----CTTCCEEEECCCCB
T ss_pred CcEEEECCcHHHHHH-HHHHHHCCCEEEEEEcChh-hhhhHhhCCCeEEEecccc-cc----cCCCCEEEECCCcc
Confidence 469999998899875 5666678999999986533 3345556787776653221 11 23688888766543
No 140
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=77.55 E-value=2.5 Score=41.79 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=27.0
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCCeE
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDDLT 211 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~ 211 (538)
...+|+|+|.| |||||+..++..|...|.++.
T Consensus 103 ~~~vi~ivG~~GsGKTTl~~~LA~~l~~~g~kV~ 136 (306)
T 1vma_A 103 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVV 136 (306)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEEcCCCChHHHHHHHHHHHHHhcCCEEE
Confidence 34689999976 699999999999998887753
No 141
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=77.44 E-value=2.7 Score=42.58 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=61.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHH-HCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLL-EAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~-~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|+|.|..|..+ |+.|...|++|.++|.+.. .+.++. +.|+..+-... +. ...+|+++... . .+
T Consensus 174 ktV~V~G~G~VG~~~-A~~L~~~GakVvv~D~~~~-~l~~~a~~~ga~~v~~~~---ll----~~~~DIvip~a-~--~~ 241 (364)
T 1leh_A 174 LAVSVQGLGNVAKAL-CKKLNTEGAKLVVTDVNKA-AVSAAVAEEGADAVAPNA---IY----GVTCDIFAPCA-L--GA 241 (364)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHH-HHHHHHHHHCCEECCGGG---TT----TCCCSEEEECS-C--SC
T ss_pred CEEEEECchHHHHHH-HHHHHHCCCEEEEEcCCHH-HHHHHHHHcCCEEEChHH---Hh----ccCCcEeeccc-h--HH
Confidence 569999999999975 7788889999999996432 223222 33765532111 11 12478776531 1 10
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
++... .+... +. .+-+-++||-+|.-. ...+|++.|.
T Consensus 242 ------------~I~~~-~~~~l--g~-~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 242 ------------VLNDF-TIPQL--KA-KVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp ------------CBSTT-HHHHC--CC-SEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred ------------HhCHH-HHHhC--CC-cEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 11111 11111 22 355668999987645 5678888885
No 142
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=77.35 E-value=7.1 Score=38.30 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=69.0
Q ss_pred CceEEEEeech-hhHHHHHHHHHhCCCcEEEecCCCChhHH--HHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCC
Q 009279 75 KGWIHFVGIGG-SGLSALAKLALKQGFEVSGSDLVWSSYME--GLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 75 ~~~v~vlG~G~-sG~~~la~~l~~~G~~v~g~D~~~~~~~~--~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
-++++|||.|+ .|+. +|.+|...|++|+..+.+..+ +. +.. ..+.+++. -.+..+.. ++. ++..+|+..+
T Consensus 165 Gk~vvVIG~s~iVG~p-~A~lL~~~gAtVtv~~~~T~~-l~l~~~~-~~ADIVI~Avg~p~~I~~-~~v-k~GavVIDvg 239 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAP-VAALLMKENATVTIVHSGTST-EDMIDYL-RTADIVIAAMGQPGYVKG-EWI-KEGAAVVDVG 239 (300)
T ss_dssp TCEEEEECCCTTTHHH-HHHHHHHTTCEEEEECTTSCH-HHHHHHH-HTCSEEEECSCCTTCBCG-GGS-CTTCEEEECC
T ss_pred CCEEEEECCCchHHHH-HHHHHHHCCCeEEEEeCCCCC-chhhhhh-ccCCEEEECCCCCCCCcH-Hhc-CCCcEEEEEe
Confidence 36789999988 5886 578888899999998853322 22 322 23444332 22211221 111 4567888888
Q ss_pred CCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 150 IPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 150 i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
+++..-. -...|-.+....+|-.-......+--|-|--|.=|++.++.+.++++
T Consensus 240 i~~~~~~---~~~~g~kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa 293 (300)
T 4a26_A 240 TTPVPDP---SRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAF 293 (300)
T ss_dssp CEEESCS---CSTTSCEEECSBCHHHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHH
T ss_pred ccCCcCC---cccCCceeecCccHHHHHhhceEeCCCCCcChHHHHHHHHHHHHHHH
Confidence 7642100 00112234444343221111222333447899999999999999764
No 143
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=77.11 E-value=15 Score=32.57 Aligned_cols=32 Identities=19% Similarity=0.144 Sum_probs=20.7
Q ss_pred CceEEEEeechhhHHHH--HHHHHhCCCcEEEec
Q 009279 75 KGWIHFVGIGGSGLSAL--AKLALKQGFEVSGSD 106 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~l--a~~l~~~G~~v~g~D 106 (538)
.++|+|+|.|.|+..|. +..|..-|..+...+
T Consensus 39 a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 39 ADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEecCchHHHHHHHHHHHHhcCCCEEEec
Confidence 46799999999997653 233344566655443
No 144
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=76.92 E-value=4.6 Score=39.62 Aligned_cols=46 Identities=20% Similarity=0.069 Sum_probs=34.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|..|.+ +|..|+ .|++|...+... +..+.+.+.|..+.
T Consensus 3 mkI~IiGaGa~G~~-~a~~L~-~g~~V~~~~r~~-~~~~~l~~~G~~~~ 48 (307)
T 3ego_A 3 LKIGIIGGGSVGLL-CAYYLS-LYHDVTVVTRRQ-EQAAAIQSEGIRLY 48 (307)
T ss_dssp CEEEEECCSHHHHH-HHHHHH-TTSEEEEECSCH-HHHHHHHHHCEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHh-cCCceEEEECCH-HHHHHHHhCCceEe
Confidence 36899999999985 577778 999999988432 23455666787664
No 145
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.82 E-value=1.7 Score=43.46 Aligned_cols=31 Identities=29% Similarity=0.262 Sum_probs=27.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|.++ |..|+.+|.+|.+.|..
T Consensus 6 DViIVGaGpaGl~~-A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTA-ARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCcEEEEeCC
Confidence 37899999999986 89999999999999853
No 146
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=76.79 E-value=1.7 Score=43.70 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
-+|+|||.|.+|.++ |..|+.+|.+|.+.|.
T Consensus 2 m~V~IVGaGpaGl~~-A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCL-AHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHH-HHHHHhCCCCEEEEec
Confidence 368999999999975 8999999999999984
No 147
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=76.76 E-value=8.7 Score=38.08 Aligned_cols=71 Identities=23% Similarity=0.310 Sum_probs=46.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
++|.|+|.|..|.+ +|..|+.+|. ++...|.....- ..++.. ....+....+.+.+ +.+|+||
T Consensus 6 ~kI~iiGaG~vG~~-~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~------~~aDvVI 78 (321)
T 3p7m_A 6 KKITLVGAGNIGGT-LAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDL------ENSDVVI 78 (321)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHH------CCCCEEE
Confidence 57999999999986 5788888887 899999765421 112221 23334322333333 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
+..++|+.
T Consensus 79 i~ag~p~k 86 (321)
T 3p7m_A 79 VTAGVPRK 86 (321)
T ss_dssp ECCSCCCC
T ss_pred EcCCcCCC
Confidence 98887653
No 148
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=76.75 E-value=2 Score=41.07 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=28.0
Q ss_pred cCCcEEEEeCC---CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 179 EKYNLIAVSGS---HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 179 ~~~~vI~VTGT---nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+..++|+|++. .||||++..++..|. .|++|..+
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~Vlli 61 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLI 61 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEE
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEE
Confidence 45789999865 479999999999999 99987544
No 149
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=76.50 E-value=3.1 Score=41.48 Aligned_cols=88 Identities=20% Similarity=0.153 Sum_probs=46.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.+|.|||.|..|..-+..+....|.++. +.|.+. +....+ .+.|+..+- +..++.. ...+|+|++...-...
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~-~~~~~~a~~~g~~~~~--~~~~~l~---~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFI-EGAQRLAEANGAEAVA--SPDEVFA---RDDIDGIVIGSPTSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSH-HHHHHHHHTTTCEEES--SHHHHTT---CSCCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCH-HHHHHHHHHcCCceeC--CHHHHhc---CCCCCEEEEeCCchhh
Confidence 4699999999998765555555688777 456432 223333 344755432 2111110 1157888885421111
Q ss_pred CHHHHHHHHCCCCeee
Q 009279 154 NVEILHAKSVGVPIYK 169 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~ 169 (538)
.+...+|.+.|..|+.
T Consensus 79 ~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 79 VDLITRAVERGIPALC 94 (344)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCcEEE
Confidence 2233444455555544
No 150
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=75.93 E-value=4.3 Score=40.54 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=62.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+ +|+.|+..|.+|.++|...... .|+... .+...+. ...|+|++.. |.+ +
T Consensus 165 ~~vgIIG~G~iG~~-vA~~l~~~G~~V~~~dr~~~~~------~g~~~~--~~l~ell-----~~aDvVil~v--P~~-~ 227 (333)
T 3ba1_A 165 KRVGIIGLGRIGLA-VAERAEAFDCPISYFSRSKKPN------TNYTYY--GSVVELA-----SNSDILVVAC--PLT-P 227 (333)
T ss_dssp CCEEEECCSHHHHH-HHHHHHTTTCCEEEECSSCCTT------CCSEEE--SCHHHHH-----HTCSEEEECS--CCC-G
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCEEEEECCCchhc------cCceec--CCHHHHH-----hcCCEEEEec--CCC-h
Confidence 46999999999997 4788888999999999654321 144321 1111111 1478888854 222 1
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
... .++.. +.+... ++. .+-|--+.|+.....-+...|+..+.
T Consensus 228 ~t~-------~li~~-~~l~~m-k~g-ailIn~srG~~vd~~aL~~aL~~g~i 270 (333)
T 3ba1_A 228 ETT-------HIINR-EVIDAL-GPK-GVLINIGRGPHVDEPELVSALVEGRL 270 (333)
T ss_dssp GGT-------TCBCH-HHHHHH-CTT-CEEEECSCGGGBCHHHHHHHHHHTSS
T ss_pred HHH-------HHhhH-HHHhcC-CCC-CEEEECCCCchhCHHHHHHHHHcCCC
Confidence 111 12221 233333 223 34477778888877777778877544
No 151
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=75.87 E-value=4 Score=41.96 Aligned_cols=47 Identities=30% Similarity=0.347 Sum_probs=36.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
..+|+|+|.|..|+.+ ++.+...|++|.+.|.+... .+.+.+.|+.+
T Consensus 190 ~~kV~ViG~G~iG~~a-a~~a~~lGa~V~v~D~~~~~-l~~~~~~G~~~ 236 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQA-IATARRLGAVVSATDVRPAA-KEQVASLGAKF 236 (405)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSTTH-HHHHHHTTCEE
T ss_pred CCEEEEECCcHHHHHH-HHHHHHCCCEEEEEcCCHHH-HHHHHHcCCce
Confidence 3579999999999987 56667789999999976542 45566678875
No 152
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=75.68 E-value=9.2 Score=37.43 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=26.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC--CcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG--FEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G--~~v~g~D~~ 108 (538)
.+|.|+|.|..|.+ +|..|+..| .+|.+.|.+
T Consensus 2 ~kI~VIGaG~~G~~-la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAA-VAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEcCC
Confidence 36899999999998 577777788 799999965
No 153
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=75.64 E-value=6.2 Score=39.08 Aligned_cols=73 Identities=18% Similarity=0.200 Sum_probs=46.4
Q ss_pred CCceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCC-ChhH----HHHH------HCCCeEEeCCCCCCcCCCCCCCCC
Q 009279 74 RKGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVW-SSYM----EGLL------EAGANLHIGHSVSNIQGNDGSRFP 141 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~-~~~~----~~~~------~~Ga~~~~~~~~~~~~~~~~~~~~ 141 (538)
+.++|.|+|.|..|.+ +|..|+..|. +|...|... .+.. .++. .....+....+...+ +.+
T Consensus 7 ~~~kv~ViGaG~vG~~-ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~------~~a 79 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGAT-TAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADT------ADS 79 (315)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG------TTC
T ss_pred CCCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHh------CCC
Confidence 3467999999999987 5777888998 999999763 1111 1111 123333333333333 368
Q ss_pred CEEEEcCCCCCC
Q 009279 142 NAVVASSAIPQD 153 (538)
Q Consensus 142 d~vvvsp~i~~~ 153 (538)
|+||+..|.|+.
T Consensus 80 DvVIiaag~p~k 91 (315)
T 3tl2_A 80 DVVVITAGIARK 91 (315)
T ss_dssp SEEEECCSCCCC
T ss_pred CEEEEeCCCCCC
Confidence 999998887653
No 154
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=75.60 E-value=2 Score=43.77 Aligned_cols=30 Identities=30% Similarity=0.254 Sum_probs=26.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
+|.|||.|.+|++| |..|+++|.+|.+.+.
T Consensus 2 dVvVIGaGiaGLsa-A~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 2 KTVVIGAGLGGLLS-AARLSKAGHEVEVFER 31 (425)
T ss_dssp EEEEECCBHHHHHH-HHHHHHTTCEEEEECS
T ss_pred cEEEECCCHHHHHH-HHHHHhCCCceEEEeC
Confidence 47899999999997 7888889999999884
No 155
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=75.26 E-value=7.8 Score=40.50 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 38 ~kV~VIGaG~MG~~-iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRG-IAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHH-HHHHHHhCCCeEEEEECCH
Confidence 46999999988875 5788888999999999653
No 156
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=75.07 E-value=9.3 Score=37.94 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=46.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
.+|.|+|.|..|.+ +|..|+..|. ++...|.+...- ..++.. ....+....+.+.+ +.+|+||
T Consensus 8 ~kI~viGaG~vG~~-~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~------~~aDiVI 80 (324)
T 3gvi_A 8 NKIALIGSGMIGGT-LAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAI------EGADVVI 80 (324)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHH------CCCCEEE
Confidence 57999999999986 5888888898 999999875421 112211 23444332333333 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
+..|+|+.
T Consensus 81 iaag~p~k 88 (324)
T 3gvi_A 81 VTAGVPRK 88 (324)
T ss_dssp ECCSCCCC
T ss_pred EccCcCCC
Confidence 98887653
No 157
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=75.07 E-value=3.1 Score=37.90 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=25.9
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
...+|+|+|.+ ||||++.+|...|...|..+
T Consensus 21 ~~~~i~i~G~~GsGKstl~~~l~~~~~~~~~~v 53 (201)
T 1rz3_A 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQGISV 53 (201)
T ss_dssp SSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCeE
Confidence 45699999976 89999999999998776553
No 158
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=75.02 E-value=2.1 Score=39.67 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=41.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|+|.|..|.+. +..|+..|++|.+.|.+. +..+.+.+.|+... +..... ..+|+|++..
T Consensus 29 ~~I~iiG~G~~G~~l-a~~l~~~g~~V~~~~r~~-~~~~~~~~~g~~~~---~~~~~~-----~~~DvVi~av 91 (215)
T 2vns_A 29 PKVGILGSGDFARSL-ATRLVGSGFKVVVGSRNP-KRTARLFPSAAQVT---FQEEAV-----SSPEVIFVAV 91 (215)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCEEEEESSH-HHHHHHSBTTSEEE---EHHHHT-----TSCSEEEECS
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEEeCCH-HHHHHHHHcCCcee---cHHHHH-----hCCCEEEECC
Confidence 469999999999874 666777899999998542 22334444576653 111111 2579988864
No 159
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=74.52 E-value=5.1 Score=40.34 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=67.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|+..|.+|.++|.... ..+.+.+.|+... ...+++. ...|+|++..-..+...
T Consensus 165 ktvGIIG~G~IG~~v-A~~l~~~G~~V~~~dr~~~-~~~~~~~~g~~~~--~~l~ell-----~~aDvV~l~~Plt~~t~ 235 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLL-LQRLKPFGCNLLYHDRLQM-APELEKETGAKFV--EDLNEML-----PKCDVIVINMPLTEKTR 235 (351)
T ss_dssp CEEEEECCSHHHHHH-HHHHGGGCCEEEEECSSCC-CHHHHHHHCCEEC--SCHHHHG-----GGCSEEEECSCCCTTTT
T ss_pred CEEeEEEeCHHHHHH-HHHHHHCCCEEEEeCCCcc-CHHHHHhCCCeEc--CCHHHHH-----hcCCEEEECCCCCHHHH
Confidence 569999999999975 7778889999999996532 1233445576542 1112211 25788887542221111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
.++.. +.+... +...+-|--+.|+--...-+...|+...
T Consensus 236 ----------~li~~-~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g~ 274 (351)
T 3jtm_A 236 ----------GMFNK-ELIGKL--KKGVLIVNNARGAIMERQAVVDAVESGH 274 (351)
T ss_dssp ----------TCBSH-HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred ----------HhhcH-HHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhCC
Confidence 11221 334333 2346777777788888888888887753
No 160
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=74.49 E-value=2.9 Score=38.52 Aligned_cols=30 Identities=40% Similarity=0.512 Sum_probs=25.0
Q ss_pred EEEEe---CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 183 LIAVS---GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 183 vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+|+|+ |-.||||++..++..|...| +|..+
T Consensus 2 vI~v~s~KGGvGKTT~a~~LA~~la~~g-~Vlli 34 (209)
T 3cwq_A 2 IITVASFKGGVGKTTTAVHLSAYLALQG-ETLLI 34 (209)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHTTS-CEEEE
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHhcC-CEEEE
Confidence 67776 56799999999999999999 87543
No 161
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=74.49 E-value=23 Score=35.03 Aligned_cols=106 Identities=16% Similarity=0.099 Sum_probs=63.3
Q ss_pred CceEEEEeechh-hHHHHHHHHHhCCCcEEEecCC---------------CC---------hhHHHHHHCCCeEEeC--C
Q 009279 75 KGWIHFVGIGGS-GLSALAKLALKQGFEVSGSDLV---------------WS---------SYMEGLLEAGANLHIG--H 127 (538)
Q Consensus 75 ~~~v~vlG~G~s-G~~~la~~l~~~G~~v~g~D~~---------------~~---------~~~~~~~~~Ga~~~~~--~ 127 (538)
.++++|||.|.. |+.+ |.+|...|++|+..|.+ .. +.+.+.. ..+.++++ -
T Consensus 177 gk~vvVIG~G~iVG~~~-A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l-~~ADIVIsAtg 254 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPL-AALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCS-LDSDVVITGVP 254 (320)
T ss_dssp TCEEEEECCCTTTHHHH-HHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHH-HHCSEEEECCC
T ss_pred CCEEEEECCCcchHHHH-HHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHh-ccCCEEEECCC
Confidence 367999999975 8874 78888899999988753 11 1122221 13444442 1
Q ss_pred CCCC-cCCCCCCCCCCEEEEcCCCCCCC-HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 128 SVSN-IQGNDGSRFPNAVVASSAIPQDN-VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 128 ~~~~-~~~~~~~~~~d~vvvsp~i~~~~-~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
.+.. +.. ++. .+..+|+..|++++- +.+ .. ..-.||=.-|+=|++.++.+.++.
T Consensus 255 ~p~~vI~~-e~v-k~GavVIDVgi~rD~d~~v---------------------~~-~a~~itPvVGpmT~a~Ll~n~~~a 310 (320)
T 1edz_A 255 SENYKFPT-EYI-KEGAVCINFACTKNFSDDV---------------------KE-KASLYVPMTGKVTIAMLLRNMLRL 310 (320)
T ss_dssp CTTCCBCT-TTS-CTTEEEEECSSSCCBCGGG---------------------GT-TEEEEESCCHHHHHHHHHHHHHHH
T ss_pred CCcceeCH-HHc-CCCeEEEEcCCCcccchhH---------------------Hh-hCCeeCCCccHHHHHHHHHHHHHH
Confidence 1211 211 111 356788888887632 211 01 123355448999999999999987
Q ss_pred c
Q 009279 206 M 206 (538)
Q Consensus 206 ~ 206 (538)
+
T Consensus 311 ~ 311 (320)
T 1edz_A 311 V 311 (320)
T ss_dssp H
T ss_pred H
Confidence 4
No 162
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.40 E-value=1.4 Score=44.52 Aligned_cols=39 Identities=21% Similarity=0.172 Sum_probs=25.7
Q ss_pred hhhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 68 IVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 68 ~~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..++++++.||+|+|.|..|..+ +..|+ +.++|.+.|..
T Consensus 9 ~~~~~g~~mkilvlGaG~vG~~~-~~~L~-~~~~v~~~~~~ 47 (365)
T 3abi_A 9 HHHIEGRHMKVLILGAGNIGRAI-AWDLK-DEFDVYIGDVN 47 (365)
T ss_dssp -------CCEEEEECCSHHHHHH-HHHHT-TTSEEEEEESC
T ss_pred cccccCCccEEEEECCCHHHHHH-HHHHh-cCCCeEEEEcC
Confidence 34677777889999999999875 66665 56888888853
No 163
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=74.32 E-value=4.1 Score=40.45 Aligned_cols=44 Identities=16% Similarity=0.096 Sum_probs=32.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGA 121 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga 121 (538)
-+|.|||.|.-|.+ +|..|+..|++|.++|.+ .+.++.+.+.|.
T Consensus 15 ~kI~iIG~G~mG~a-la~~L~~~G~~V~~~~r~-~~~~~~l~~~g~ 58 (335)
T 1z82_A 15 MRFFVLGAGSWGTV-FAQMLHENGEEVILWARR-KEIVDLINVSHT 58 (335)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSS-HHHHHHHHHHSC
T ss_pred CcEEEECcCHHHHH-HHHHHHhCCCeEEEEeCC-HHHHHHHHHhCC
Confidence 46899999999875 577778899999999854 223455555563
No 164
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=74.07 E-value=3.6 Score=41.94 Aligned_cols=48 Identities=25% Similarity=0.285 Sum_probs=36.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
..+|+|+|.|..|+.+ ++.+...|++|.+.|.+.. ..+.+.+.|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~a-a~~a~~lGa~V~v~D~~~~-~l~~~~~lGa~~~ 231 (381)
T 3p2y_A 184 PASALVLGVGVAGLQA-LATAKRLGAKTTGYDVRPE-VAEQVRSVGAQWL 231 (381)
T ss_dssp CCEEEEESCSHHHHHH-HHHHHHHTCEEEEECSSGG-GHHHHHHTTCEEC
T ss_pred CCEEEEECchHHHHHH-HHHHHHCCCEEEEEeCCHH-HHHHHHHcCCeEE
Confidence 3579999999999987 5666778999999996543 3456667788753
No 165
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=73.83 E-value=3.1 Score=40.97 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=37.4
Q ss_pred CceEEEEeechhhHHHHHHHHH-hCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 75 KGWIHFVGIGGSGLSALAKLAL-KQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~-~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+.+|.|||.|..|...++..|. ..|.++. +.|.+... .+.+ .+.|+.+ ..+.+.+. ..+|+|++..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~-~~~~~~~~g~~~--~~~~~~l~-----~~~D~V~i~t 73 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAK-ALPICESWRIPY--ADSLSSLA-----ASCDAVFVHS 73 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTT-HHHHHHHHTCCB--CSSHHHHH-----TTCSEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHcCCCc--cCcHHHhh-----cCCCEEEEeC
Confidence 3569999999999863344444 4577766 66755432 3333 3347652 11212221 2578888754
No 166
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=73.81 E-value=3.5 Score=41.52 Aligned_cols=110 Identities=17% Similarity=0.149 Sum_probs=63.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|...|.+|.++|....+. ...+.|+.... ...++. ...|+|++.....+...
T Consensus 169 ~tvGIIG~G~IG~~v-A~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~--~l~ell-----~~aDvV~l~~P~t~~t~ 238 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAV-ALRAKAFGFNVLFYDPYLSDG--VERALGLQRVS--TLQDLL-----FHSDCVTLHCGLNEHNH 238 (347)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEECTTSCTT--HHHHHTCEECS--SHHHHH-----HHCSEEEECCCCCTTCT
T ss_pred CEEEEEeECHHHHHH-HHHHHHCCCEEEEECCCcchh--hHhhcCCeecC--CHHHHH-----hcCCEEEEcCCCCHHHH
Confidence 569999999999975 777788999999999654331 22344664321 111111 14788887532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.++.. +.+... + ...+-|--+.|+--...-+...|+..+.
T Consensus 239 ----------~li~~-~~l~~m-k-~gailIN~arg~~vd~~aL~~aL~~g~i 278 (347)
T 1mx3_A 239 ----------HLIND-FTVKQM-R-QGAFLVNTARGGLVDEKALAQALKEGRI 278 (347)
T ss_dssp ----------TSBSH-HHHTTS-C-TTEEEEECSCTTSBCHHHHHHHHHHTSE
T ss_pred ----------HHhHH-HHHhcC-C-CCCEEEECCCChHHhHHHHHHHHHhCCC
Confidence 11221 223221 2 2356666667777777777777877543
No 167
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=73.78 E-value=5.4 Score=39.76 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=45.2
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHH----HHCC--CeEEeCCCCC-CcCCCCCCCCCCE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGL----LEAG--ANLHIGHSVS-NIQGNDGSRFPNA 143 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~----~~~G--a~~~~~~~~~-~~~~~~~~~~~d~ 143 (538)
+.+|.|+|.|..|.+ +|..|+..|. +|..+|.+...- ..++ ...+ ..+....+.. .+ +.+|+
T Consensus 9 ~~kI~VIGaG~vG~~-lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~------~~aDi 81 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-MGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL------TGADC 81 (331)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH------TTCSE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHh------CCCCE
Confidence 357999999999987 6888888998 999999775411 1111 1122 2232222222 23 26899
Q ss_pred EEEcCCCCC
Q 009279 144 VVASSAIPQ 152 (538)
Q Consensus 144 vvvsp~i~~ 152 (538)
||...++|.
T Consensus 82 Vi~a~g~p~ 90 (331)
T 1pzg_A 82 VIVTAGLTK 90 (331)
T ss_dssp EEECCSCSS
T ss_pred EEEccCCCC
Confidence 999887765
No 168
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=73.78 E-value=2.3 Score=43.44 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=26.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
+|.|||.|.+|+++ |..|+++|.+|.+.+.
T Consensus 2 dVvVIGaGiaGLsa-A~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 2 RAVVVGAGLGGLLA-GAFLARNGHEIIVLEK 31 (421)
T ss_dssp EEEEESCSHHHHHH-HHHHHHTTCEEEEECS
T ss_pred cEEEECCCHHHHHH-HHHHHHCCCeEEEEeC
Confidence 58899999999987 7888889999999984
No 169
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=73.43 E-value=2.4 Score=43.98 Aligned_cols=31 Identities=23% Similarity=0.128 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~ 107 (538)
++|.|||.|.+|++| |..|+++|. +|.+.+.
T Consensus 3 ~dVvVIGaGiaGLsa-A~~L~~~G~~~~V~vlEa 35 (477)
T 3nks_A 3 RTVVVLGGGISGLAA-SYHLSRAPCPPKVVLVES 35 (477)
T ss_dssp CEEEEECCBHHHHHH-HHHHHTSSSCCEEEEECS
T ss_pred ceEEEECCcHHHHHH-HHHHHhCCCCCcEEEEeC
Confidence 468999999999997 888899999 9999874
No 170
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=73.31 E-value=3.5 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.282 Sum_probs=26.1
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHH-cCCCeEE
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKA-MGDDLTA 212 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~-~G~~v~~ 212 (538)
+..+|+++|.| |||||+..|+..+.. .|+++..
T Consensus 104 ~g~vi~lvG~~GsGKTTl~~~LA~~l~~~~G~~V~l 139 (296)
T 2px0_A 104 HSKYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAF 139 (296)
T ss_dssp CSSEEEEEESTTSSHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCEEEE
Confidence 34578888765 799999999999985 8887643
No 171
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=73.30 E-value=3.1 Score=41.06 Aligned_cols=86 Identities=14% Similarity=0.083 Sum_probs=44.2
Q ss_pred ceEEEEeechhhHHHHHHHHH-hCCCcEEEecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLAL-KQGFEVSGSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~-~~G~~v~g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.+|.|||.|..|..+++..|. ..|.++.+.|.+.. ..+.+ .+.|+........+.+. ...|+|++... +..
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~-~~~~~a~~~g~~~~~~~~~~~l~-----~~~D~V~i~tp-~~~ 75 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPK-VLGTLATRYRVSATCTDYRDVLQ-----YGVDAVMIHAA-TDV 75 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHH-HHHHHHHHTTCCCCCSSTTGGGG-----GCCSEEEECSC-GGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHH-HHHHHHHHcCCCccccCHHHHhh-----cCCCEEEEECC-chh
Confidence 358999999988743344444 35777777775432 23333 34576531222222221 25798888642 122
Q ss_pred CHHH-HHHHHCCCCee
Q 009279 154 NVEI-LHAKSVGVPIY 168 (538)
Q Consensus 154 ~~~l-~~a~~~gi~vi 168 (538)
+..+ .++.+.|..|+
T Consensus 76 h~~~~~~al~~Gk~V~ 91 (323)
T 1xea_A 76 HSTLAAFFLHLGIPTF 91 (323)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHCCCeEE
Confidence 3332 23444455444
No 172
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=73.17 E-value=21 Score=34.43 Aligned_cols=96 Identities=17% Similarity=0.184 Sum_probs=55.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCCh-----------hHHHHHH--CCCeEEeCCCCC--------CcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSS-----------YMEGLLE--AGANLHIGHSVS--------NIQ 133 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~-----------~~~~~~~--~Ga~~~~~~~~~--------~~~ 133 (538)
++++|+|.|+.|+++ +..|+..|. +|.+.+.+... ..+++.+ .++.+++.-.+. .+.
T Consensus 118 k~vlvlGaGg~g~ai-a~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~ 196 (277)
T 3don_A 118 AYILILGAGGASKGI-ANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVIS 196 (277)
T ss_dssp CCEEEECCSHHHHHH-HHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSSC
T ss_pred CEEEEECCcHHHHHH-HHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCC
Confidence 569999999999986 666778998 89988865321 1223332 245555421110 111
Q ss_pred CCCCCCCCCEEEEcCC-CCCCCHHHHHHHHCCCCeeeHHHHH
Q 009279 134 GNDGSRFPNAVVASSA-IPQDNVEILHAKSVGVPIYKRDYWL 174 (538)
Q Consensus 134 ~~~~~~~~d~vvvsp~-i~~~~~~l~~a~~~gi~vi~~~~~l 174 (538)
.... ..+.+|+.-. .|...+.+++|++.|+.++.-.+.+
T Consensus 197 -~~~l-~~~~~V~D~vY~P~~T~ll~~A~~~G~~~~~Gl~ML 236 (277)
T 3don_A 197 -LNRL-ASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMF 236 (277)
T ss_dssp -CTTC-CSSCEEEESCCSSSSCHHHHHHHHTTCCEECTHHHH
T ss_pred -HHHc-CCCCEEEEecCCCCCCHHHHHHHHCcCEEeCCHHHH
Confidence 0111 2334444322 2445688889999999887765544
No 173
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=72.81 E-value=8.2 Score=38.32 Aligned_cols=68 Identities=19% Similarity=0.152 Sum_probs=47.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIP 151 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~ 151 (538)
.+|+|+|.|+.|..+ +.+++..|++|.+.|.... ..+.+.+.|+..++ .+.+.+. ..+|+++-..+.+
T Consensus 178 ~~VlV~GaG~vG~~a-~qla~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~v~-~~~~~~~-----~~~D~vid~~g~~ 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMA-VKYAVAMGAEVSVFARNEH-KKQDALSMGVKHFY-TDPKQCK-----EELDFIISTIPTH 245 (348)
T ss_dssp CEEEEESCSHHHHHH-HHHHHHTTCEEEEECSSST-THHHHHHTTCSEEE-SSGGGCC-----SCEEEEEECCCSC
T ss_pred CEEEEECCcHHHHHH-HHHHHHCCCeEEEEeCCHH-HHHHHHhcCCCeec-CCHHHHh-----cCCCEEEECCCcH
Confidence 458999999999987 4666778999999885443 34567788998777 3333332 1578888776643
No 174
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=72.77 E-value=2.6 Score=41.61 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
-.|+|||.|.+|+++ |..|+.+|.+|.+.|.
T Consensus 5 ~dvvIIG~G~~Gl~~-A~~La~~G~~V~vlE~ 35 (369)
T 3dme_A 5 IDCIVIGAGVVGLAI-ARALAAGGHEVLVAEA 35 (369)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCeEEEEeC
Confidence 358899999999986 7888899999999984
No 175
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=72.64 E-value=3.3 Score=41.94 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=28.5
Q ss_pred CCcEEEEeC---CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSG---SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTG---TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+.++|+|++ -.||||++.-++..|...|++|..+
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlli 178 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYL 178 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEE
Confidence 468999985 4579999999999999999987543
No 176
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=72.49 E-value=7.7 Score=40.77 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=43.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
++++|+|.|+.|+++ |..|+..|++|.+.|.+.. -..++...|+.+.- ..... ...|+++...+
T Consensus 266 KtVvVtGaGgIG~ai-A~~Laa~GA~Viv~D~~~~-~a~~Aa~~g~dv~~---lee~~-----~~aDvVi~atG 329 (488)
T 3ond_A 266 KVAVVAGYGDVGKGC-AAALKQAGARVIVTEIDPI-CALQATMEGLQVLT---LEDVV-----SEADIFVTTTG 329 (488)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHH-HHHHHHHTTCEECC---GGGTT-----TTCSEEEECSS
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCEEEEEcCCHH-HHHHHHHhCCccCC---HHHHH-----HhcCEEEeCCC
Confidence 568999999999986 7778889999999985421 23445566764421 11111 25788887655
No 177
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=72.39 E-value=13 Score=41.05 Aligned_cols=34 Identities=18% Similarity=0.095 Sum_probs=28.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
.++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 314 i~kV~VIGaG~MG~~-iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGG-IAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHH-HHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHH-HHHHHHhCCCEEEEEECCH
Confidence 356999999988865 5777888999999999753
No 178
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=72.38 E-value=21 Score=32.12 Aligned_cols=72 Identities=19% Similarity=0.130 Sum_probs=43.2
Q ss_pred eEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 77 WIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 77 ~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
+|+|.|. |..|... ++.|+.+|++|.+.+.+... ...+. .++.++.++-.+.-. .....+|.||-.-+.+..
T Consensus 2 kvlVtGatG~iG~~l-~~~L~~~g~~V~~~~R~~~~-~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~ 74 (221)
T 3ew7_A 2 KIGIIGATGRAGSRI-LEEAKNRGHEVTAIVRNAGK-ITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD 74 (221)
T ss_dssp EEEEETTTSHHHHHH-HHHHHHTTCEEEEEESCSHH-HHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT
T ss_pred eEEEEcCCchhHHHH-HHHHHhCCCEEEEEEcCchh-hhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc
Confidence 5889996 7888865 56667789999999865322 22222 577766542111000 001257888887776543
No 179
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=72.31 E-value=13 Score=36.73 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=31.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEA 119 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~ 119 (538)
.+|.|+|.|..|.. +|..|+..|++|.+.|.+. +..+.+.+.
T Consensus 5 mki~iiG~G~~G~~-~a~~L~~~g~~V~~~~r~~-~~~~~~~~~ 46 (359)
T 1bg6_A 5 KTYAVLGLGNGGHA-FAAYLALKGQSVLAWDIDA-QRIKEIQDR 46 (359)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHHH
T ss_pred CeEEEECCCHHHHH-HHHHHHhCCCEEEEEeCCH-HHHHHHHhc
Confidence 46999999999986 5777788999999998532 234445454
No 180
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=72.30 E-value=1.8 Score=41.17 Aligned_cols=64 Identities=14% Similarity=0.051 Sum_probs=40.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHH-CCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLE-AGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|..|.+ ++..|...|++|.++|.+. +..+.+.+ .|+... .+..+.. ..+|+|++..
T Consensus 4 m~i~iiG~G~mG~~-~a~~l~~~g~~v~~~~~~~-~~~~~~~~~~g~~~~--~~~~~~~-----~~~D~Vi~~v 68 (259)
T 2ahr_A 4 MKIGIIGVGKMASA-IIKGLKQTPHELIISGSSL-ERSKEIAEQLALPYA--MSHQDLI-----DQVDLVILGI 68 (259)
T ss_dssp CEEEEECCSHHHHH-HHHHHTTSSCEEEEECSSH-HHHHHHHHHHTCCBC--SSHHHHH-----HTCSEEEECS
T ss_pred cEEEEECCCHHHHH-HHHHHHhCCCeEEEECCCH-HHHHHHHHHcCCEee--CCHHHHH-----hcCCEEEEEe
Confidence 46999999999986 4677777899999998543 22334443 375531 1111111 1479988865
No 181
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=71.97 E-value=3 Score=41.55 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
..|.|||.|.+|.++ |..|+++|.+|.+.|.
T Consensus 7 ~dVvVIG~Gi~Gls~-A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSS-ALILARKGYSVHILAR 37 (363)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEES
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCEEEEEec
Confidence 468999999999986 7888999999999984
No 182
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=71.92 E-value=20 Score=35.27 Aligned_cols=70 Identities=20% Similarity=0.120 Sum_probs=43.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC--CcEEEecCCCCh---hHHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG--FEVSGSDLVWSS---YMEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G--~~v~g~D~~~~~---~~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
.||.|+|.|..|.+. +..|+.+| .++...|.+... .+.++.. ..+.+.. ...+.+ +.+|+|
T Consensus 7 ~KI~IIGaG~vG~~l-a~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~~~a~------~~aDvV 78 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSY-AFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GEYSDC------HDADLV 78 (317)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CCGGGG------TTCSEE
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CCHHHh------CCCCEE
Confidence 579999999999985 55666677 489999975321 1112211 1223322 222233 368999
Q ss_pred EEcCCCCCC
Q 009279 145 VASSAIPQD 153 (538)
Q Consensus 145 vvsp~i~~~ 153 (538)
|+..+.|..
T Consensus 79 vi~ag~~~~ 87 (317)
T 3d0o_A 79 VICAGAAQK 87 (317)
T ss_dssp EECCCCCCC
T ss_pred EECCCCCCC
Confidence 998887754
No 183
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=71.78 E-value=3.1 Score=40.63 Aligned_cols=46 Identities=24% Similarity=0.288 Sum_probs=35.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhC-----C-CcEEEecCCCChhHHHHHH-CCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ-----G-FEVSGSDLVWSSYMEGLLE-AGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~-----G-~~v~g~D~~~~~~~~~~~~-~Ga~~~ 124 (538)
.+|+|||.|.-|.+ +|..|+.. | ++|.++|. .+..+.+.+ .|+.+.
T Consensus 9 m~I~iiG~G~mG~~-~a~~L~~~~~~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~ 61 (317)
T 2qyt_A 9 IKIAVFGLGGVGGY-YGAMLALRAAATDGLLEVSWIAR--GAHLEAIRAAGGLRVV 61 (317)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHHHHHTTSSEEEEEECC--HHHHHHHHHHTSEEEE
T ss_pred CEEEEECcCHHHHH-HHHHHHhCccccCCCCCEEEEEc--HHHHHHHHhcCCeEEE
Confidence 46999999999965 57777777 9 99999985 344566666 787654
No 184
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=71.41 E-value=1.7 Score=43.36 Aligned_cols=32 Identities=16% Similarity=-0.019 Sum_probs=26.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+..|.|||.|.+|.++ |..|+ +|.+|.+.|..
T Consensus 9 ~~dv~IIGaGi~Gls~-A~~La-~G~~V~vlE~~ 40 (381)
T 3nyc_A 9 EADYLVIGAGIAGAST-GYWLS-AHGRVVVLERE 40 (381)
T ss_dssp ECSEEEECCSHHHHHH-HHHHT-TTSCEEEECSS
T ss_pred cCCEEEECCcHHHHHH-HHHHh-CCCCEEEEECC
Confidence 3568999999999987 77777 79999999854
No 185
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=71.40 E-value=4.3 Score=39.46 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=65.6
Q ss_pred CceEEEEeechh-hHHHHHHHHHhC--CCcEEEecCCCChhHHHHHHCCCeEEeC--CCCCCcCCCCCCCCCCEEEEcCC
Q 009279 75 KGWIHFVGIGGS-GLSALAKLALKQ--GFEVSGSDLVWSSYMEGLLEAGANLHIG--HSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 75 ~~~v~vlG~G~s-G~~~la~~l~~~--G~~v~g~D~~~~~~~~~~~~~Ga~~~~~--~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
.++++|+|.|.. |+.+ |.+|..+ |++|+..+.+..+..+.+. .+.++++ -.+..+.. ++. ++..+|+..|
T Consensus 158 gk~vvVvG~s~iVG~p~-A~lL~~~g~~atVtv~h~~t~~L~~~~~--~ADIVI~Avg~p~~I~~-~~v-k~GavVIDVg 232 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPL-GLLLTRRSENATVTLCHTGTRDLPALTR--QADIVVAAVGVAHLLTA-DMV-RPGAAVIDVG 232 (281)
T ss_dssp TCEEEEECCCTTTHHHH-HHHHTSTTTCCEEEEECTTCSCHHHHHT--TCSEEEECSCCTTCBCG-GGS-CTTCEEEECC
T ss_pred CCEEEEECCCcHHHHHH-HHHHhcCCCCCEEEEEECchhHHHHHHh--hCCEEEECCCCCcccCH-HHc-CCCcEEEEcc
Confidence 467999999976 8874 7777888 8999988754332222232 3444432 22211211 111 3467888888
Q ss_pred CCCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 150 IPQDNVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 150 i~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
+++.. .| +....+ -.-......+--|-|--|.=|++.++.+.++++
T Consensus 233 i~r~~--------~g--lvGDVd-~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa 278 (281)
T 2c2x_A 233 VSRTD--------DG--LVGDVH-PDVWELAGHVSPNPGGVGPLTRAFLLTNVVELA 278 (281)
T ss_dssp EEEET--------TE--EEESBC-GGGGGTCSEEECSSSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCC--------CC--ccCccc-cchhhheeeecCCCCCccHHHHHHHHHHHHHHH
Confidence 76521 01 222211 000011223344457899999999999999864
No 186
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=71.39 E-value=2.5 Score=42.28 Aligned_cols=109 Identities=14% Similarity=0.141 Sum_probs=65.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|+..|.+|.++|..... .+.+.+.|+... ...++. ...|+|++..-..+...
T Consensus 146 ~tvGIIG~G~IG~~v-A~~l~~~G~~V~~~d~~~~~-~~~~~~~g~~~~---~l~ell-----~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAM-ADRLQGWGATLQYHEAKALD-TQTEQRLGLRQV---ACSELF-----ASSDFILLALPLNADTL 215 (330)
T ss_dssp CEEEEECCSHHHHHH-HHHTTTSCCEEEEECSSCCC-HHHHHHHTEEEC---CHHHHH-----HHCSEEEECCCCSTTTT
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEECCCCCc-HhHHHhcCceeC---CHHHHH-----hhCCEEEEcCCCCHHHH
Confidence 579999999999975 77788899999999965421 223334565431 111111 14788887532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
.++.. +.+... +...+-|--+.|+--...-+...|+..+
T Consensus 216 ----------~li~~-~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~g~ 254 (330)
T 4e5n_A 216 ----------HLVNA-ELLALV--RPGALLVNPCRGSVVDEAAVLAALERGQ 254 (330)
T ss_dssp ----------TCBCH-HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred ----------HHhCH-HHHhhC--CCCcEEEECCCCchhCHHHHHHHHHhCC
Confidence 11221 233222 2346777777788888888888887754
No 187
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=71.32 E-value=5.2 Score=36.57 Aligned_cols=30 Identities=43% Similarity=0.472 Sum_probs=25.2
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCC
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~ 209 (538)
...+|+|.|-| ||||+..+|..++...|..
T Consensus 21 ~g~~v~I~G~sGsGKSTl~~~l~~~~~~~g~~ 52 (208)
T 3c8u_A 21 GRQLVALSGAPGSGKSTLSNPLAAALSAQGLP 52 (208)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCc
Confidence 45799999977 8999999999999876533
No 188
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=71.25 E-value=8.4 Score=37.71 Aligned_cols=70 Identities=19% Similarity=0.144 Sum_probs=44.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChh---HHHH---HH---CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSY---MEGL---LE---AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~---~~~~---~~---~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
||.|+|.|..|.+ +|..|+..|. ++...|.+...- ..++ .. ....+....+.+.+ +.+|+||
T Consensus 2 kI~ViGaG~vG~~-la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~------~~aDiVV 74 (294)
T 1oju_A 2 KLGFVGAGRVGST-SAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL------KGSEIIV 74 (294)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGG------TTCSEEE
T ss_pred EEEEECCCHHHHH-HHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHh------CCCCEEE
Confidence 5889999999987 4777787887 899999754321 1111 11 23334333333333 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
+..|.|+.
T Consensus 75 iaag~~~k 82 (294)
T 1oju_A 75 VTAGLARK 82 (294)
T ss_dssp ECCCCCCC
T ss_pred ECCCCCCC
Confidence 98887753
No 189
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=71.25 E-value=3.4 Score=41.07 Aligned_cols=33 Identities=36% Similarity=0.318 Sum_probs=28.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 7 ~kI~vIGaG~MG~~-iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRS-WAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHH-HHHHHHHCCCEEEEEeCCH
Confidence 57999999998886 5777788999999999753
No 190
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=71.18 E-value=7.8 Score=40.49 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=26.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhC--CCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~ 108 (538)
.+|.|||+|.-|.+. |..|+.. |++|.++|.+
T Consensus 6 mkI~VIG~G~mG~~l-A~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPT-CSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHH-HHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHH-HHHHHhcCCCCEEEEEECC
Confidence 469999999999875 5666666 8999999964
No 191
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=71.05 E-value=3.3 Score=41.05 Aligned_cols=89 Identities=15% Similarity=0.016 Sum_probs=46.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
+.+|.|||.|..|..-+..+....|.++. +.|.+. +..+.+ .+.|+.-... +...+.. ....|+|++...- .
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~-~~~~~~~~~~~~~~~~~-~~~~ll~---~~~~D~V~i~tp~-~ 78 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRL-ENAQKMAKELAIPVAYG-SYEELCK---DETIDIIYIPTYN-Q 78 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSS-HHHHHHHHHTTCCCCBS-SHHHHHH---CTTCSEEEECCCG-G
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCH-HHHHHHHHHcCCCceeC-CHHHHhc---CCCCCEEEEcCCC-H
Confidence 35799999999998765555555677777 456433 233333 3456632111 1111110 0147888875321 2
Q ss_pred CCH-HHHHHHHCCCCeee
Q 009279 153 DNV-EILHAKSVGVPIYK 169 (538)
Q Consensus 153 ~~~-~l~~a~~~gi~vi~ 169 (538)
.+. ...+|.+.|..|+.
T Consensus 79 ~h~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 79 GHYSAAKLALSQGKPVLL 96 (330)
T ss_dssp GHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHCCCeEEE
Confidence 232 33444455555554
No 192
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=71.03 E-value=2.8 Score=42.29 Aligned_cols=30 Identities=27% Similarity=0.224 Sum_probs=27.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|+++ |..|+.+|.+|.+.|.
T Consensus 6 DVvIIGaG~~Gl~~-A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 6 DVVVVGGGPVGLAT-AWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHH-HHHHHHCCCeEEEEeC
Confidence 58899999999986 8888999999999984
No 193
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=70.75 E-value=2.2 Score=43.11 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=27.6
Q ss_pred CcEEEEeC---CCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVSG---SHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VTG---TnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
+++|+|++ -.||||++.-++..|...|++|..+
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlI 36 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYV 36 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEE
Confidence 36788874 4689999999999999999997654
No 194
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=70.69 E-value=3.9 Score=42.45 Aligned_cols=33 Identities=36% Similarity=0.481 Sum_probs=28.0
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
..+|.++|.+ |||||+..|+..|+..|.+|...
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv 131 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLV 131 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4689999865 59999999999999999987543
No 195
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=70.66 E-value=4.5 Score=39.72 Aligned_cols=117 Identities=15% Similarity=0.039 Sum_probs=66.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEe--CCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI--GHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
+++.|||-+..-...+|.+|..+|+.|+....+.. .+.+..+ .|.+++ .-.+..+.. ++- ++..+|+..||.+.
T Consensus 180 k~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~-dl~~~~~-~ADIvV~A~G~p~~i~~-d~v-k~GavVIDVGin~~ 255 (303)
T 4b4u_A 180 KHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQ-NLPELVK-QADIIVGAVGKAELIQK-DWI-KQGAVVVDAGFHPR 255 (303)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-SHHHHHH-TCSEEEECSCSTTCBCG-GGS-CTTCEEEECCCBCC
T ss_pred CEEEEEeccccccchHHHHHHhcCCEEEEecCCCC-CHHHHhh-cCCeEEeccCCCCcccc-ccc-cCCCEEEEeceecC
Confidence 56889998866555678999999999997764322 2333322 233333 222222221 111 46789999998653
Q ss_pred CHHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 154 NVEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 154 ~~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.- .+....+|-.-......+-=|-|--|.=|++.|+.+.++++
T Consensus 256 ~~----------~~vGDVdf~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa 298 (303)
T 4b4u_A 256 DG----------GGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAA 298 (303)
T ss_dssp TT----------SCBCSBCCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHH
T ss_pred CC----------CeECCcCHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHH
Confidence 21 11121121100011112223448899999999999999875
No 196
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=73.39 E-value=0.87 Score=42.07 Aligned_cols=62 Identities=23% Similarity=0.246 Sum_probs=38.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|..|.+ ++..|...|++|.++|.... .+.+.+.|+... ...+.+ ..+|+|++..
T Consensus 20 ~~I~iIG~G~mG~~-la~~L~~~G~~V~~~~r~~~--~~~~~~~g~~~~--~~~~~~------~~aDvVilav 81 (201)
T 2yjz_A 20 GVVCIFGTGDFGKS-LGLKMLQCGYSVVFGSRNPQ--VSSLLPRGAEVL--CYSEAA------SRSDVIVLAV 81 (201)
Confidence 45899999999986 46777778999999885432 333434454432 111111 2478877753
No 197
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=70.54 E-value=5.4 Score=39.55 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=61.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC-CCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL-VWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~-~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|||+|..|.+. |+.|...|.+|.++|. .... ..+.+.|+... ....++. ...|+|++.....+..
T Consensus 147 ~~vgIIG~G~IG~~~-A~~l~~~G~~V~~~d~~~~~~--~~~~~~g~~~~--~~l~ell-----~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 147 KTLGIYGFGSIGQAL-AKRAQGFDMDIDYFDTHRASS--SDEASYQATFH--DSLDSLL-----SVSQFFSLNAPSTPET 216 (320)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEECSSCCCH--HHHHHHTCEEC--SSHHHHH-----HHCSEEEECCCCCTTT
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEECCCCcCh--hhhhhcCcEEc--CCHHHHH-----hhCCEEEEeccCchHH
Confidence 569999999999985 7777889999999997 5543 23445677541 1111111 1478888854222211
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
. .++.. +.+... ++..++--+|+ |.-....-+...|+..+
T Consensus 217 ~----------~~i~~-~~l~~m-k~gailIn~ar-g~~vd~~aL~~aL~~g~ 256 (320)
T 1gdh_A 217 R----------YFFNK-ATIKSL-PQGAIVVNTAR-GDLVDNELVVAALEAGR 256 (320)
T ss_dssp T----------TCBSH-HHHTTS-CTTEEEEECSC-GGGBCHHHHHHHHHHTS
T ss_pred H----------hhcCH-HHHhhC-CCCcEEEECCC-CcccCHHHHHHHHHhCC
Confidence 1 11221 222222 22334444555 76655566667777643
No 198
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=70.53 E-value=5.1 Score=42.30 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=44.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
++|+|+|.|..|..+ |..++..|.+|.++|.... -...+.+.|+.+ .. ..+.. ...|+|+..++
T Consensus 275 ktV~IiG~G~IG~~~-A~~lka~Ga~Viv~d~~~~-~~~~A~~~Ga~~-~~--l~e~l-----~~aDvVi~atg 338 (494)
T 3ce6_A 275 KKVLICGYGDVGKGC-AEAMKGQGARVSVTEIDPI-NALQAMMEGFDV-VT--VEEAI-----GDADIVVTATG 338 (494)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHH-HHHHHHHTTCEE-CC--HHHHG-----GGCSEEEECSS
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEEeCCHH-HHHHHHHcCCEE-ec--HHHHH-----hCCCEEEECCC
Confidence 569999999999986 6777789999999995422 234566788864 21 11111 25799998765
No 199
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.39 E-value=7.1 Score=36.32 Aligned_cols=69 Identities=16% Similarity=0.098 Sum_probs=44.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCC--CcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS--NIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~--~~~~~~~~~~~d~vvvsp~ 149 (538)
++|+|+|.|..|... +..|...|+ |.+.|.++. ..+.+. .|+.++.+.... .+.. .....+|.+|+..+
T Consensus 10 ~~viI~G~G~~G~~l-a~~L~~~g~-v~vid~~~~-~~~~~~-~~~~~i~gd~~~~~~l~~-a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLEC-LRELRGSEV-FVLAEDENV-RKKVLR-SGANFVHGDPTRVSDLEK-ANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHH-HHHSTTSEE-EEEESCGGG-HHHHHH-TTCEEEESCTTCHHHHHH-TTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHH-HHHHHhCCe-EEEEECCHH-HHHHHh-cCCeEEEcCCCCHHHHHh-cCcchhcEEEEcCC
Confidence 568899999999874 677777899 999985432 344455 788887764321 1100 01235788887643
No 200
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=70.30 E-value=5 Score=41.57 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=43.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
++|.|+|.|..|+++ |..|...|.+|.++|.+.. ....+...|..+. ..++.. ...|+|+..++
T Consensus 212 ktVgIiG~G~IG~~v-A~~Lka~Ga~Viv~D~~p~-~a~~A~~~G~~~~---sL~eal-----~~ADVVilt~g 275 (436)
T 3h9u_A 212 KTACVCGYGDVGKGC-AAALRGFGARVVVTEVDPI-NALQAAMEGYQVL---LVEDVV-----EEAHIFVTTTG 275 (436)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHH-HHHHHHHTTCEEC---CHHHHT-----TTCSEEEECSS
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEECCChh-hhHHHHHhCCeec---CHHHHH-----hhCCEEEECCC
Confidence 579999999999986 7777889999999995421 1234556776542 111111 25798887654
No 201
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=70.28 E-value=3 Score=42.64 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=23.8
Q ss_pred HhcCCcEEEEe---CCCCchHHHHHHHHHHH------HcCCCeEEE
Q 009279 177 LTEKYNLIAVS---GSHGKSTTASMLAYVLK------AMGDDLTAI 213 (538)
Q Consensus 177 ~~~~~~vI~VT---GTnGKTTTt~ml~~iL~------~~G~~v~~~ 213 (538)
+....++|+|+ |-.|||||+..++..|. ..|++|..+
T Consensus 107 ~~~~~~vIav~s~KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlli 152 (403)
T 3ez9_A 107 IHKSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVI 152 (403)
T ss_dssp HSCSCEEEEECCC--------CHHHHHHHHHSCGGGGGGCCCEEEE
T ss_pred CCCCceEEEEEcCCCCchHHHHHHHHHHHHHhcchhhcCCCeEEEE
Confidence 33467899999 66799999999999998 578886543
No 202
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=70.14 E-value=5.9 Score=35.50 Aligned_cols=34 Identities=29% Similarity=0.181 Sum_probs=28.5
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCCeEEE
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
..++|+|+|. .||||+...+...|...|++++.+
T Consensus 5 ~~~~i~i~G~sGsGKTTl~~~l~~~l~~~g~~v~~i 40 (174)
T 1np6_A 5 MIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLI 40 (174)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cceEEEEEeCCCCCHHHHHHHHHHhccccCCceeEE
Confidence 4689999997 489999999999998889887644
No 203
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=70.09 E-value=3.2 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.219 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|.++ |..|+++|.+|...|..
T Consensus 6 ~dVvIIGgGi~Gl~~-A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 6 SEIVVIGGGIVGVTI-AHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCeEEEEeCC
Confidence 358899999999986 78888899999999854
No 204
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=70.03 E-value=2.5 Score=43.42 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=31.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhHHHHHHCCCeE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
++|+|+|.|+.|..+ +..|+..|. +|.+.|.....-.+-+.+.|+.+
T Consensus 168 ~~VlIiGaG~iG~~~-a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~ 215 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTV-AKSLVDRGVRAVLVANRTYERAVELARDLGGEA 215 (404)
T ss_dssp CEEEEESCCHHHHHH-HHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE
T ss_pred CEEEEEChHHHHHHH-HHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce
Confidence 569999999999986 556666798 89999854221112233457763
No 205
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=69.99 E-value=3.6 Score=41.91 Aligned_cols=32 Identities=31% Similarity=0.399 Sum_probs=27.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
..+|+|||.|.+|+++ |..|+..|.+|.+.+.
T Consensus 44 ~~~V~IIGAGiaGL~a-A~~L~~~G~~V~VlE~ 75 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVA-GDLLTRAGHDVTILEA 75 (376)
T ss_dssp CCEEEEECCBHHHHHH-HHHHHHTSCEEEEECS
T ss_pred CceEEEECCCHHHHHH-HHHHHHCCCcEEEEec
Confidence 3568999999999987 7888889999999873
No 206
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=69.96 E-value=4.9 Score=40.28 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=29.6
Q ss_pred cCCcEEEEe---CCCCchHHHHHHHHHHHHcCCCeEEEe
Q 009279 179 EKYNLIAVS---GSHGKSTTASMLAYVLKAMGDDLTAIV 214 (538)
Q Consensus 179 ~~~~vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~~ 214 (538)
+..++|.|+ |-.||||++.-++..|...|++|..+.
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD 61 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVS 61 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 456788887 567899999999999999999975543
No 207
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=69.94 E-value=3.3 Score=41.49 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCCceEEEEeechhhHHHHHHHHHh-CCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 73 NRKGWIHFVGIGGSGLSALAKLALK-QGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 73 ~~~~~v~vlG~G~sG~~~la~~l~~-~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
+++.+|.|||.|..|..-+..+... .|.++. +.|.+.. ..+.+ .+.|+..+- +.+++.. ....|+|++...
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~-~~~~~~~~~~~~~~~--~~~~ll~---~~~~D~V~i~tp 84 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPA-ALKAAVERTGARGHA--SLTDMLA---QTDADIVILTTP 84 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHH-HHHHHHHHHCCEEES--CHHHHHH---HCCCSEEEECSC
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHH-HHHHHHHHcCCceeC--CHHHHhc---CCCCCEEEECCC
Confidence 3446799999999998765555554 577765 5664322 23333 344774432 2211110 014788888532
Q ss_pred CCCCCH-HHHHHHHCCCCeee
Q 009279 150 IPQDNV-EILHAKSVGVPIYK 169 (538)
Q Consensus 150 i~~~~~-~l~~a~~~gi~vi~ 169 (538)
. ..|. ...+|.+.|..|+.
T Consensus 85 ~-~~h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 85 S-GLHPTQSIECSEAGFHVMT 104 (354)
T ss_dssp G-GGHHHHHHHHHHTTCEEEE
T ss_pred c-HHHHHHHHHHHHCCCCEEE
Confidence 1 2232 33444455555554
No 208
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=69.89 E-value=1.8 Score=44.57 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC------CcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG------FEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G------~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|++.| .+|.+.+.
T Consensus 6 ~dVvIIGaGiaGLsa-A~~L~~~G~~~~~~~~V~vlEa 42 (470)
T 3i6d_A 6 KHVVIIGGGITGLAA-AFYMEKEIKEKNLPLELTLVEA 42 (470)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHHHTTTTCSEEEEEECS
T ss_pred CcEEEECCCHHHHHH-HHHHHHhccccCCCCCEEEEEC
Confidence 568999999999997 78888889 99999884
No 209
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=69.64 E-value=2.6 Score=41.22 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=44.9
Q ss_pred ceEEEEeechhhHHHHHHHHHh-CCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK-QGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~-~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
.+|.|||.|..|....+..|+. .|.++. +.|.+. +..+.+ .+.|+.. . .+.+++. ..+|+|++...- .
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~~~~~a~~~~~~~-~-~~~~~ll-----~~~D~V~i~tp~-~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNK-VKREKICSDYRIMP-F-DSIESLA-----KKCDCIFLHSST-E 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCH-HHHHHHHHHHTCCB-C-SCHHHHH-----TTCSEEEECCCG-G
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCH-HHHHHHHHHcCCCC-c-CCHHHHH-----hcCCEEEEeCCc-H
Confidence 5699999999998744555544 677777 466432 223333 3347654 2 2222221 147888885321 2
Q ss_pred CCH-HHHHHHHCCCCeee
Q 009279 153 DNV-EILHAKSVGVPIYK 169 (538)
Q Consensus 153 ~~~-~l~~a~~~gi~vi~ 169 (538)
.|. ...+|.+.|..|+.
T Consensus 78 ~h~~~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 78 THYEIIKILLNLGVHVYV 95 (308)
T ss_dssp GHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHCCCcEEE
Confidence 233 23344445555443
No 210
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=69.58 E-value=5.8 Score=39.19 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=44.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC----CcEEEecCCCC-hhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG----FEVSGSDLVWS-SYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G----~~v~g~D~~~~-~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|.-|.+ +|..|...| ++|.++|.+.. +..+.+.+.|+.+.-. ..+... .+|+|++..
T Consensus 23 mkI~iIG~G~mG~a-la~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~-~~e~~~------~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFA-LAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPH-NKETVQ------HSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHH-HHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESC-HHHHHH------HCSEEEECS
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCC-hHHHhc------cCCEEEEEe
Confidence 35899999999986 567777789 89999987654 3455666778765321 111111 479999875
No 211
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=69.46 E-value=3.4 Score=39.91 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=26.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|+|||.|+.|++. +..|...|.+|.+.|.+
T Consensus 130 ~~v~iiGaG~~g~ai-a~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAV-IYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHH-HHHHHHcCCEEEEEECC
Confidence 579999999999975 56666779999999854
No 212
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=69.43 E-value=10 Score=37.72 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=44.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChh---HHHHHH-----CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSY---MEGLLE-----AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~---~~~~~~-----~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
++|.|+|.|..|.+. |..|+..|. ++...|.+...- ..++.. .+..+..+ +.+.+ +.+|+||
T Consensus 10 ~kV~ViGaG~vG~~~-a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~-~~~a~------~~aDiVv 81 (326)
T 3vku_A 10 QKVILVGDGAVGSSY-AYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA-EYSDA------KDADLVV 81 (326)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC-CGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC-cHHHh------cCCCEEE
Confidence 579999999999875 677777776 889999643210 112211 12232222 22233 3689999
Q ss_pred EcCCCCCCC-HHHHHHHHCCCCeeeH
Q 009279 146 ASSAIPQDN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 146 vsp~i~~~~-~~l~~a~~~gi~vi~~ 170 (538)
+..|.|+.. .......+.+++++..
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~ 107 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKS 107 (326)
T ss_dssp ECCCCC----------------CHHH
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHH
Confidence 988876532 1122223445666554
No 213
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=69.33 E-value=3 Score=40.71 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=27.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|.
T Consensus 23 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 23 NKVTIIGSGPAAHTA-AIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCCEEEEec
Confidence 568999999999987 7778889999999984
No 214
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=69.30 E-value=13 Score=36.43 Aligned_cols=69 Identities=19% Similarity=0.117 Sum_probs=40.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh--hHHHHHHC-CCeEEeCCCCCCcCCCCCCCCCCEEEEcCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS--YMEGLLEA-GANLHIGHSVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~--~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
++|.|+|.|..|.+ +|..++.+|. ++...|.+... ...++... ...+....+...+ +.+|+||...++
T Consensus 15 ~kV~ViGaG~vG~~-~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~~~l------~~aD~Vi~aag~ 87 (303)
T 2i6t_A 15 NKITVVGGGELGIA-CTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSAS------AHSKVVIFTVNS 87 (303)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCGGGG------TTCSEEEECCCC
T ss_pred CEEEEECCCHHHHH-HHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCHHHH------CCCCEEEEcCCC
Confidence 57999999865654 3566677888 89999976531 11122221 1133332233333 368999998877
Q ss_pred C
Q 009279 151 P 151 (538)
Q Consensus 151 ~ 151 (538)
+
T Consensus 88 ~ 88 (303)
T 2i6t_A 88 L 88 (303)
T ss_dssp -
T ss_pred C
Confidence 4
No 215
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=69.28 E-value=3.5 Score=41.22 Aligned_cols=32 Identities=16% Similarity=-0.088 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|.++ |..|+++|.+|.+.|..
T Consensus 18 ~dvvIIGgG~~Gl~~-A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAI-AYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHH-HHHHHhCCCcEEEEeCC
Confidence 458899999999986 78888899999999854
No 216
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=69.25 E-value=14 Score=36.18 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=43.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
.+|.|+|.|..|.+. +..|+.+|. ++...|.+...- +.++.+ ....+....+.+.+ +.+|+||
T Consensus 3 ~kI~VIGaG~vG~~~-a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~------~~aD~Vi 75 (309)
T 1ur5_A 3 KKISIIGAGFVGSTT-AHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT------ANSDVIV 75 (309)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG------TTCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHH------CCCCEEE
Confidence 469999999999974 667788886 899999765311 112221 12233322223333 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
...+.|..
T Consensus 76 ~a~g~p~~ 83 (309)
T 1ur5_A 76 VTSGAPRK 83 (309)
T ss_dssp ECCCC---
T ss_pred EcCCCCCC
Confidence 99887653
No 217
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=69.18 E-value=2.3 Score=45.38 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=42.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
++|.|||+|..|.+. |+.|+..|.+|.++|.... .+.+.+.|+... +..++. ..+|+|++..
T Consensus 143 ~~vgIIG~G~IG~~v-A~~l~~~G~~V~~~d~~~~--~~~a~~~g~~~~---~l~e~~-----~~aDvV~l~~ 204 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLV-AQRIAAFGAYVVAYDPYVS--PARAAQLGIELL---SLDDLL-----ARADFISVHL 204 (529)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEECTTSC--HHHHHHHTCEEC---CHHHHH-----HHCSEEEECC
T ss_pred CEEEEEeeCHHHHHH-HHHHHhCCCEEEEECCCCC--hhHHHhcCcEEc---CHHHHH-----hcCCEEEECC
Confidence 569999999999985 7777889999999996543 234556687642 111111 1478888864
No 218
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=68.75 E-value=7.2 Score=39.62 Aligned_cols=47 Identities=23% Similarity=0.285 Sum_probs=35.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|+.|+.+ +..++..|.+|.++|.+.. -.+.+.+.|+...
T Consensus 173 ~~V~ViGaG~iG~~a-a~~a~~~Ga~V~~~d~~~~-~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQA-IATAKRLGAVVMATDVRAA-TKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCST-THHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCEEEEEeCCHH-HHHHHHHcCCeEE
Confidence 569999999999987 5666778999999996543 2344556788754
No 219
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=68.72 E-value=7.5 Score=36.91 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=40.3
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCc-EEEecCCCChhHHHHHHC-CCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFE-VSGSDLVWSSYMEGLLEA-GANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~-v~g~D~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|..|.+ ++..|+..|++ |.++|.+. +..+.+.+. |+...- +..+.. ..+|+|++..
T Consensus 12 ~i~iiG~G~mG~~-~a~~l~~~g~~~v~~~~~~~-~~~~~~~~~~g~~~~~--~~~~~~-----~~~Dvvi~av 76 (266)
T 3d1l_A 12 PIVLIGAGNLATN-LAKALYRKGFRIVQVYSRTE-ESARELAQKVEAEYTT--DLAEVN-----PYAKLYIVSL 76 (266)
T ss_dssp CEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSH-HHHHHHHHHTTCEEES--CGGGSC-----SCCSEEEECC
T ss_pred eEEEEcCCHHHHH-HHHHHHHCCCeEEEEEeCCH-HHHHHHHHHcCCceeC--CHHHHh-----cCCCEEEEec
Confidence 5899999999986 46666777998 88998542 233444443 766432 221111 2579998864
No 220
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=68.71 E-value=3.4 Score=41.94 Aligned_cols=32 Identities=31% Similarity=0.349 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|.++ |..|+++|.+|...|..
T Consensus 6 ~dVvIIGgG~aGl~~-A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVA-ASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCEEEECSS
T ss_pred CcEEEECCCHHHHHH-HHHHHhCCCCEEEEeCC
Confidence 468999999999986 78889999999999854
No 221
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=68.64 E-value=4.7 Score=39.10 Aligned_cols=45 Identities=22% Similarity=0.209 Sum_probs=33.8
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
+|.|||.|..|.+ +|..|+..|++|.+.|.+. +..+.+.+.|+..
T Consensus 5 ~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~r~~-~~~~~~~~~g~~~ 49 (316)
T 2ew2_A 5 KIAIAGAGAMGSR-LGIMLHQGGNDVTLIDQWP-AHIEAIRKNGLIA 49 (316)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTTCEEEEECSCH-HHHHHHHHHCEEE
T ss_pred eEEEECcCHHHHH-HHHHHHhCCCcEEEEECCH-HHHHHHHhCCEEE
Confidence 6899999999986 5777788999999998542 2345565667654
No 222
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=68.61 E-value=4.2 Score=38.45 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=28.3
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.++|.|||.|.-|.+ +|..|+..|++|.++|.+
T Consensus 19 ~~kIgiIG~G~mG~a-lA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRT-MAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCCCEEEEEeCC
Confidence 467999999999986 577788899999999965
No 223
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=68.61 E-value=2.8 Score=40.37 Aligned_cols=32 Identities=25% Similarity=0.222 Sum_probs=27.0
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEE-ecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSG-SDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g-~D~ 107 (538)
..+|+|||.|.+|+++ |..|+.+|++|.. .|.
T Consensus 4 ~~~vvIIG~G~aGl~a-A~~l~~~g~~v~li~e~ 36 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSA-GLYATRGGLKNVVMFEK 36 (315)
T ss_dssp CEEEEEECCSHHHHHH-HHHHHHHTCSCEEEECS
T ss_pred CceEEEECCCHHHHHH-HHHHHHCCCCeEEEEeC
Confidence 4578999999999997 6777788999998 873
No 224
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=68.57 E-value=3.7 Score=41.11 Aligned_cols=30 Identities=30% Similarity=0.309 Sum_probs=26.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|.++ |..|+.+|.+|.+.|.
T Consensus 5 dvvIIGaG~~Gl~~-A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 5 DVIVVGAGSMGMAA-GYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CEEEECCCHHHHHH-HHHHHhCCCeEEEEeC
Confidence 58899999999986 7888899999999984
No 225
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=68.32 E-value=3.7 Score=42.81 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|++.|.+|.+.+.
T Consensus 12 ~~v~IIGaG~aGl~a-A~~L~~~g~~v~v~E~ 42 (489)
T 2jae_A 12 HSVVVLGGGPAGLCS-AFELQKAGYKVTVLEA 42 (489)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCCEEEEec
Confidence 468999999999987 7888889999999874
No 226
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=68.22 E-value=3.5 Score=42.56 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=28.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|...
T Consensus 28 ~dViIIGgG~AGl~a-A~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 28 QDVVIIGAGAAGMMC-AIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCcEEEEeCCC
Confidence 458899999999986 788888999999999553
No 227
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=68.21 E-value=3.5 Score=43.53 Aligned_cols=31 Identities=35% Similarity=0.345 Sum_probs=26.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+..|++|.+.+.
T Consensus 5 ~~vvIIGaG~aGL~a-A~~L~~~G~~V~vlE~ 35 (520)
T 1s3e_A 5 CDVVVVGGGISGMAA-AKLLHDSGLNVVVLEA 35 (520)
T ss_dssp CSEEEECCBHHHHHH-HHHHHHTTCCEEEECS
T ss_pred ceEEEECCCHHHHHH-HHHHHHCCCCEEEEeC
Confidence 358899999999997 7788889999999874
No 228
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=68.12 E-value=3.7 Score=40.08 Aligned_cols=31 Identities=35% Similarity=0.347 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 4 dV~IIGaG~~Gl~~-A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 4 PIAIIGTGIAGLSA-AQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHH-HHHHHHCCCcEEEEECC
Confidence 48899999999986 88889999999999843
No 229
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=68.03 E-value=4.5 Score=36.20 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=26.8
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCeEE
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~~ 212 (538)
.++|+|+|.+ ||||+..+|...+...|++++.
T Consensus 2 ~~~v~IvG~SGsGKSTL~~~L~~~~~~~g~~~G~ 35 (171)
T 2f1r_A 2 SLILSIVGTSDSGKTTLITRMMPILRERGLRVAV 35 (171)
T ss_dssp -CEEEEEESCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhhhcCCceEE
Confidence 3689999976 6999999999999998887653
No 230
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=68.02 E-value=4.1 Score=39.80 Aligned_cols=30 Identities=30% Similarity=0.451 Sum_probs=23.4
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCC
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~ 209 (538)
+..+|+|||. .||||++.+++..|...|.+
T Consensus 4 ~~~iIgItG~sGSGKSTva~~L~~~lg~~~~~ 35 (290)
T 1a7j_A 4 KHPIISVTGSSGAGTSTVKHTFDQIFRREGVK 35 (290)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHHHHTCC
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHhhcCCC
Confidence 3569999995 58999999999999766654
No 231
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=68.00 E-value=3.3 Score=42.64 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=28.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|+|||.|.+|+++ |..|+..|.+|...|..
T Consensus 23 ~~ViIVGaGpaGl~~-A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHL-GLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHH-HHHHHHTTCEEEEEESC
T ss_pred CCEEEECCcHHHHHH-HHHHHHCCCeEEEEcCC
Confidence 468999999999985 88889999999999854
No 232
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=67.97 E-value=28 Score=33.48 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=26.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|...+.+
T Consensus 120 ~k~~lvlGaGg~~~ai-a~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGA-LLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHH-HHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHH-HHHHHHcCCCEEEEEeCC
Confidence 4679999999999986 566667895 89988754
No 233
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=67.97 E-value=5 Score=40.28 Aligned_cols=90 Identities=19% Similarity=0.134 Sum_probs=48.0
Q ss_pred CceEEEEeechhhHHHHHHHH-HhCCCcEE-EecCCCChhHHH-HHHCC--CeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLA-LKQGFEVS-GSDLVWSSYMEG-LLEAG--ANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l-~~~G~~v~-g~D~~~~~~~~~-~~~~G--a~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
+.+|.|||.|..|..-+..+. ...|.++. +.|.+.. ..+. +.+.| +..+- +.+++.. ....|+|++...
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~-~~~~~a~~~g~~~~~~~--~~~~ll~---~~~~D~V~i~tp 96 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAG-RAQAALDKYAIEAKDYN--DYHDLIN---DKDVEVVIITAS 96 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTT-HHHHHHHHHTCCCEEES--SHHHHHH---CTTCCEEEECSC
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHH-HHHHHHHHhCCCCeeeC--CHHHHhc---CCCCCEEEEcCC
Confidence 457999999999987655554 34688876 4665443 2333 33446 33332 2111110 014788888542
Q ss_pred CCCCCHHHHHHHHCCCCeeeH
Q 009279 150 IPQDNVEILHAKSVGVPIYKR 170 (538)
Q Consensus 150 i~~~~~~l~~a~~~gi~vi~~ 170 (538)
-....+...+|.+.|..|+.+
T Consensus 97 ~~~h~~~~~~al~aGk~Vl~E 117 (357)
T 3ec7_A 97 NEAHADVAVAALNANKYVFCE 117 (357)
T ss_dssp GGGHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCCEEee
Confidence 111223344555667666654
No 234
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=67.94 E-value=6.9 Score=40.13 Aligned_cols=47 Identities=26% Similarity=0.215 Sum_probs=35.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|..|+.+ +..+...|.+|.++|.+.. -.+.+.+.|+...
T Consensus 173 ~~V~ViGaG~iG~~a-a~~a~~~Ga~V~v~D~~~~-~~~~~~~lGa~~~ 219 (401)
T 1x13_A 173 AKVMVIGAGVAGLAA-IGAANSLGAIVRAFDTRPE-VKEQVQSMGAEFL 219 (401)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCGG-GHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCEEEEEcCCHH-HHHHHHHcCCEEE
Confidence 568999999999987 5566778999999996543 2344566787653
No 235
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=67.91 E-value=4.3 Score=39.29 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=28.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 5 ~kV~VIGaG~mG~~-iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQ-IAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCeEEEEeCCH
Confidence 57999999999986 5788888999999999653
No 236
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=67.89 E-value=3.9 Score=41.75 Aligned_cols=30 Identities=33% Similarity=0.123 Sum_probs=26.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|.|||.|.+|++| |..|++.|.+|.+.+.
T Consensus 3 dVvVIGaG~aGl~a-A~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSGLKA-ARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHHH-HHHHHHcCCeEEEEec
Confidence 47899999999987 7888889999999883
No 237
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=67.89 E-value=3.7 Score=41.62 Aligned_cols=32 Identities=28% Similarity=0.263 Sum_probs=28.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
-+|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 24 ~dV~IVGaG~aGl~~-A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSA-AVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCCEEEEeCC
Confidence 468999999999975 88889999999999854
No 238
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=67.79 E-value=3.8 Score=41.71 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=26.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+..| .+|.+.+.
T Consensus 7 ~~v~IIGaG~aGl~a-A~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAA-GMYLEQAGFHDYTILER 38 (424)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCCEEEECS
T ss_pred CCEEEECcCHHHHHH-HHHHHhCCCCcEEEEEC
Confidence 458899999999987 77888899 89999873
No 239
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=67.63 E-value=3.8 Score=43.24 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+..| .+|.+.+.
T Consensus 9 ~~VvIIGaG~aGL~A-A~~L~~~G~~~V~VlEa 40 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKA-ASTLHQNGIQDCLVLEA 40 (516)
T ss_dssp EEEEEECCBHHHHHH-HHHHHHTTCCSEEEECS
T ss_pred CcEEEECCCHHHHHH-HHHHHhcCCCCEEEEeC
Confidence 568999999999998 77788899 99999874
No 240
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=67.59 E-value=3.3 Score=41.67 Aligned_cols=89 Identities=19% Similarity=0.218 Sum_probs=46.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEE-ecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSG-SDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g-~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
+-+|.|||.|..|..-+..+....|.++.+ .|.+. +-.+.+.+.|+..+ .+.+++.. ....|+|++...- ..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~-~~~~~a~~~g~~~~--~~~~~ll~---~~~~D~V~i~tp~-~~ 77 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILA-EKREAAAQKGLKIY--ESYEAVLA---DEKVDAVLIATPN-DS 77 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSH-HHHHHHHTTTCCBC--SCHHHHHH---CTTCCEEEECSCG-GG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCH-HHHHHHHhcCCcee--CCHHHHhc---CCCCCEEEEcCCc-HH
Confidence 356899999999986544443445777764 46432 22333445677542 22221110 0147888875421 22
Q ss_pred CH-HHHHHHHCCCCeeeH
Q 009279 154 NV-EILHAKSVGVPIYKR 170 (538)
Q Consensus 154 ~~-~l~~a~~~gi~vi~~ 170 (538)
|. ...+|.+.|..|+.+
T Consensus 78 h~~~~~~al~aGkhVl~E 95 (359)
T 3e18_A 78 HKELAISALEAGKHVVCE 95 (359)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCCEEee
Confidence 32 344445556665543
No 241
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=67.54 E-value=13 Score=38.99 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=51.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC---cEEEecCCCChhHHHHHHCCCeEEeCC-CCCC----cCCCCCCCCCCEEEEc
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF---EVSGSDLVWSSYMEGLLEAGANLHIGH-SVSN----IQGNDGSRFPNAVVAS 147 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~---~v~g~D~~~~~~~~~~~~~Ga~~~~~~-~~~~----~~~~~~~~~~d~vvvs 147 (538)
++|+|||+|+.|..++..++...+. ++...|..... .+.+...|....... +.++ +.. ..+..|+|| +
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~a--Ll~~~DvVI-N 89 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGS--TLEENDFLI-D 89 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGG--GCCTTCEEE-E
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHH--HhcCCCEEE-E
Confidence 4589999999999987666666666 68888854321 111223366554321 1111 110 011247666 4
Q ss_pred CCCCCCCH-HHHHHHHCCCCeeeH
Q 009279 148 SAIPQDNV-EILHAKSVGVPIYKR 170 (538)
Q Consensus 148 p~i~~~~~-~l~~a~~~gi~vi~~ 170 (538)
.+.+..+. .+.+|.+.|+.++.-
T Consensus 90 ~s~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCEEEES
T ss_pred CCccccCHHHHHHHHHcCCCEEEC
Confidence 55555554 455667788877764
No 242
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=67.49 E-value=3.9 Score=38.94 Aligned_cols=31 Identities=23% Similarity=0.010 Sum_probs=26.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|.
T Consensus 3 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSA-ALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCCEEEEeC
Confidence 358899999999987 7778889999999884
No 243
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=67.45 E-value=4.4 Score=40.25 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=37.2
Q ss_pred CCceEEEEeechhhHHHHHHHH-HhCCCcEE-EecCCCChhHHHHH-HCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 74 RKGWIHFVGIGGSGLSALAKLA-LKQGFEVS-GSDLVWSSYMEGLL-EAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l-~~~G~~v~-g~D~~~~~~~~~~~-~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
++.+|.|||.|..|...+..+. ...|.++. +.|.+.. ..+.+. +.|+..... +..++.. ...+|+|++..
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~-~~~~~a~~~g~~~~~~-~~~~~l~---~~~~D~V~i~t 79 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSN-QLEWAKNELGVETTYT-NYKDMID---TENIDAIFIVA 79 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHH-HHHHHHHTTCCSEEES-CHHHHHT---TSCCSEEEECS
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHH-HHHHHHHHhCCCcccC-CHHHHhc---CCCCCEEEEeC
Confidence 3457999999999986544443 34577754 5674322 233333 347632222 2111110 01478888754
No 244
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=67.39 E-value=4.5 Score=40.94 Aligned_cols=32 Identities=31% Similarity=0.288 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+..|.+|...|..
T Consensus 6 ~~V~IVGaG~aGl~~-A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 6 DRIAVVGGSISGLTA-ALMLRDAGVDVDVYERS 37 (397)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHH-HHHHHhCCCCEEEEecC
Confidence 468999999999986 88889999999999843
No 245
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=67.35 E-value=3.7 Score=42.63 Aligned_cols=31 Identities=26% Similarity=0.179 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+.+|.+|.+.+.
T Consensus 17 ~~v~iiG~G~~Gl~a-a~~l~~~g~~v~v~E~ 47 (478)
T 2ivd_A 17 MNVAVVGGGISGLAV-AHHLRSRGTDAVLLES 47 (478)
T ss_dssp CCEEEECCBHHHHHH-HHHHHTTTCCEEEECS
T ss_pred CcEEEECCCHHHHHH-HHHHHHCCCCEEEEEc
Confidence 458899999999987 7888899999999884
No 246
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=67.32 E-value=5.5 Score=41.45 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=28.4
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCeEEEe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDLTAIV 214 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~~~~ 214 (538)
..+|.++|.+ |||||+.-|+..|+..|++|..+.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~ 135 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVC 135 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4688888865 699999999999999999976543
No 247
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.92 E-value=4.1 Score=39.34 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=26.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|.
T Consensus 16 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGA-ALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHH-HHHHHHCCCcEEEEec
Confidence 468999999999987 6777889999999984
No 248
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=66.77 E-value=4.4 Score=42.28 Aligned_cols=31 Identities=23% Similarity=0.183 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+..|.+|.+.+.
T Consensus 40 ~~v~iiGaG~aGl~a-A~~l~~~g~~v~v~E~ 70 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTA-TRDLTVAGFKTLLLEA 70 (495)
T ss_dssp EEEEEECCBHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CCEEEECCcHHHHHH-HHHHHHCCCCEEEEeC
Confidence 568999999999987 7888889999999884
No 249
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=66.69 E-value=4.3 Score=39.36 Aligned_cols=32 Identities=22% Similarity=0.053 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|..
T Consensus 8 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFT-AFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred ceEEEECCCHHHHHH-HHHHHHCCCCEEEEEcC
Confidence 468999999999987 67778899999999853
No 250
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=66.67 E-value=7.1 Score=39.54 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=63.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.++.-|.+|.++|.... ...+.+.|+... ..+++. ...|+|++..-..+...
T Consensus 177 ktvGIIGlG~IG~~v-A~~l~~fG~~V~~~d~~~~--~~~~~~~g~~~~---~l~ell-----~~aDvV~l~~Plt~~T~ 245 (365)
T 4hy3_A 177 SEIGIVGFGDLGKAL-RRVLSGFRARIRVFDPWLP--RSMLEENGVEPA---SLEDVL-----TKSDFIFVVAAVTSENK 245 (365)
T ss_dssp SEEEEECCSHHHHHH-HHHHTTSCCEEEEECSSSC--HHHHHHTTCEEC---CHHHHH-----HSCSEEEECSCSSCC--
T ss_pred CEEEEecCCcccHHH-HHhhhhCCCEEEEECCCCC--HHHHhhcCeeeC---CHHHHH-----hcCCEEEEcCcCCHHHH
Confidence 579999999999985 7778888999999996532 234556777531 111111 25788887532222111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
. ++.. +.+... + ...+-|-=+.|.---..-|...|+...
T Consensus 246 ~----------li~~-~~l~~m-k-~gailIN~aRG~~vde~aL~~aL~~g~ 284 (365)
T 4hy3_A 246 R----------FLGA-EAFSSM-R-RGAAFILLSRADVVDFDALMAAVSSGH 284 (365)
T ss_dssp -----------CCCH-HHHHTS-C-TTCEEEECSCGGGSCHHHHHHHHHTTS
T ss_pred h----------hcCH-HHHhcC-C-CCcEEEECcCCchhCHHHHHHHHHcCC
Confidence 1 1211 333322 2 235566666777777777777887643
No 251
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.22 E-value=11 Score=37.58 Aligned_cols=70 Identities=24% Similarity=0.189 Sum_probs=43.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh---hHHHHHHC-----CCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS---YMEGLLEA-----GANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~---~~~~~~~~-----Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
++|.|+|.|..|.+ +|..++.+|. ++...|.+.+. .+.++... ...+....+.+.+ +.+|+||
T Consensus 22 ~kV~ViGaG~vG~~-~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~------~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMA-DAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVS------AGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHH-HHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSC------SSCSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHh------CCCCEEE
Confidence 57999999999987 4777777886 89999975321 11122211 1222222333333 3689999
Q ss_pred EcCCCCC
Q 009279 146 ASSAIPQ 152 (538)
Q Consensus 146 vsp~i~~ 152 (538)
+..|.|+
T Consensus 95 itaG~p~ 101 (330)
T 3ldh_A 95 ITAGARQ 101 (330)
T ss_dssp ECCSCCC
T ss_pred EeCCCCC
Confidence 9877764
No 252
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=66.14 E-value=5.8 Score=39.23 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=27.7
Q ss_pred cEEEEe---CCCCchHHHHHHHHHHHHcCCCeEEEe
Q 009279 182 NLIAVS---GSHGKSTTASMLAYVLKAMGDDLTAIV 214 (538)
Q Consensus 182 ~vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~~ 214 (538)
++|.|+ |-.||||++.-++..|.+.|++|..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD 49 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVIS 49 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEe
Confidence 677777 677899999999999999999976543
No 253
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=66.13 E-value=7.5 Score=34.30 Aligned_cols=30 Identities=23% Similarity=0.170 Sum_probs=25.3
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
..+|+++|.+ ||||++.+|+..|...|+.+
T Consensus 5 g~~i~l~G~~GsGKST~~~~L~~~l~~~g~~~ 36 (179)
T 2pez_A 5 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPC 36 (179)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHhhCCCcE
Confidence 4689999975 79999999999998877654
No 254
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=66.04 E-value=5.8 Score=39.92 Aligned_cols=33 Identities=30% Similarity=0.229 Sum_probs=29.3
Q ss_pred CCcEEEEeCCC---CchHHHHHHHHHHHHcCCCeEE
Q 009279 180 KYNLIAVSGSH---GKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 180 ~~~vI~VTGTn---GKTTTt~ml~~iL~~~G~~v~~ 212 (538)
..+.|.||||. |||+|+..+.+.|++.|++++.
T Consensus 168 ~~~ri~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~ 203 (350)
T 2g0t_A 168 KIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGF 203 (350)
T ss_dssp CSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred cceEEEEecCCCCccCccHHHHHHHHHHhcCCeEEE
Confidence 46789999985 9999999999999999999754
No 255
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=65.62 E-value=3.3 Score=41.17 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=27.1
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|.|||.|.+|.++ |..|+++|.+|.+.|..
T Consensus 4 dvvIIG~Gi~Gl~~-A~~La~~G~~V~vle~~ 34 (372)
T 2uzz_A 4 DLIIIGSGSVGAAA-GYYATRAGLNVLMTDAH 34 (372)
T ss_dssp EEEESCTTHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHH-HHHHHHCCCeEEEEecC
Confidence 48899999999986 78888999999999843
No 256
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=65.54 E-value=21 Score=32.24 Aligned_cols=16 Identities=38% Similarity=0.484 Sum_probs=13.1
Q ss_pred CceEEEEeechhhHHH
Q 009279 75 KGWIHFVGIGGSGLSA 90 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~ 90 (538)
.++|+|+|.|.|+..|
T Consensus 47 a~~I~i~G~G~S~~~A 62 (200)
T 1vim_A 47 ARSIFVIGAGRSGYIA 62 (200)
T ss_dssp SSCEEEECSHHHHHHH
T ss_pred CCEEEEEEecHHHHHH
Confidence 4579999999998754
No 257
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=65.53 E-value=8 Score=36.85 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=26.1
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+|.|||.|+.|++. +..|...|.+|.++|.+
T Consensus 118 ~v~iiG~G~~g~~~-a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAV-AFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHH-HHHHHHCCCEEEEEECC
Confidence 69999999999975 66667789999999854
No 258
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=65.50 E-value=4.6 Score=40.45 Aligned_cols=31 Identities=29% Similarity=0.262 Sum_probs=27.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 6 dVvIvG~G~aGl~~-A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 6 DVLVVGGGPGGSTA-ARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 58899999999986 78889999999999854
No 259
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=65.28 E-value=4 Score=40.86 Aligned_cols=88 Identities=15% Similarity=0.053 Sum_probs=46.2
Q ss_pred ceEEEEeechhhH-HHHHHHHHhCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGL-SALAKLALKQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~-~~la~~l~~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
.+|.|||.|..|. ..+..+....|.++. +.|.+. +..+.+ .+.|+..+- +.+++.. ....|+|++..-- .
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~~~~~a~~~g~~~~~--~~~~ll~---~~~~D~V~i~tp~-~ 100 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRW-DRAKRFTERFGGEPVE--GYPALLE---RDDVDAVYVPLPA-V 100 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSH-HHHHHHHHHHCSEEEE--SHHHHHT---CTTCSEEEECCCG-G
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCH-HHHHHHHHHcCCCCcC--CHHHHhc---CCCCCEEEECCCc-H
Confidence 4689999999998 333444444587776 456432 223333 344887652 2222110 0247888885321 2
Q ss_pred CC-HHHHHHHHCCCCeeeH
Q 009279 153 DN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 153 ~~-~~l~~a~~~gi~vi~~ 170 (538)
.| +...+|.+.|..|+.+
T Consensus 101 ~h~~~~~~al~aGk~Vl~E 119 (350)
T 3rc1_A 101 LHAEWIDRALRAGKHVLAE 119 (350)
T ss_dssp GHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCcEEEe
Confidence 23 2344445556655543
No 260
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=65.25 E-value=5.8 Score=39.78 Aligned_cols=107 Identities=12% Similarity=0.143 Sum_probs=62.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|+..|.+|.++|...... .+.++... ..+++. ...|+|++..-..+...
T Consensus 149 ktvgIiGlG~IG~~v-A~~l~~~G~~V~~~d~~~~~~----~~~~~~~~---~l~ell-----~~aDvV~l~~Plt~~t~ 215 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAV-AEIFSAMGAKVIAYDVAYNPE----FEPFLTYT---DFDTVL-----KEADIVSLHTPLFPSTE 215 (343)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCGG----GTTTCEEC---CHHHHH-----HHCSEEEECCCCCTTTT
T ss_pred CeEEEEecCHHHHHH-HHHHhhCCCEEEEECCChhhh----hhcccccc---CHHHHH-----hcCCEEEEcCCCCHHHH
Confidence 569999999999985 777788999999999754431 12233221 111111 14788877532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.++.. +.+... + ...+-|--+.|+---..-|...|+....
T Consensus 216 ----------~li~~-~~l~~m-k-~gailIN~aRg~~vd~~aL~~aL~~g~i 255 (343)
T 2yq5_A 216 ----------NMIGE-KQLKEM-K-KSAYLINCARGELVDTGALIKALQDGEI 255 (343)
T ss_dssp ----------TCBCH-HHHHHS-C-TTCEEEECSCGGGBCHHHHHHHHHHTSS
T ss_pred ----------HHhhH-HHHhhC-C-CCcEEEECCCChhhhHHHHHHHHHcCCC
Confidence 12222 334333 2 2356666667777777777778876543
No 261
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.11 E-value=4.6 Score=39.47 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=27.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|..
T Consensus 6 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFA-GFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHHHHH-HHHHHhCCCCEEEEeCC
Confidence 568999999999986 67778899999999843
No 262
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=64.99 E-value=6.9 Score=40.89 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=47.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHH-HCCCeEEeCCCCC-C-cCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLL-EAGANLHIGHSVS-N-IQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~-~~Ga~~~~~~~~~-~-~~~~~~~~~~d~vvvsp~ 149 (538)
.+|.|+|.|..|.. +|+.|...|++|.+.|.+.. .++.+. +.++.++.|+... + +.. .+-..+|++|...+
T Consensus 4 M~iiI~G~G~vG~~-la~~L~~~~~~v~vId~d~~-~~~~~~~~~~~~~i~Gd~~~~~~L~~-Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 4 MKIIILGAGQVGGT-LAENLVGENNDITIVDKDGD-RLRELQDKYDLRVVNGHASHPDVLHE-AGAQDADMLVAVTN 77 (461)
T ss_dssp EEEEEECCSHHHHH-HHHHTCSTTEEEEEEESCHH-HHHHHHHHSSCEEEESCTTCHHHHHH-HTTTTCSEEEECCS
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCCEEEEECCHH-HHHHHHHhcCcEEEEEcCCCHHHHHh-cCCCcCCEEEEEcC
Confidence 46889999999997 58888889999999995432 344454 4588888874321 1 110 11236888887554
No 263
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=64.98 E-value=8.3 Score=37.15 Aligned_cols=63 Identities=19% Similarity=0.333 Sum_probs=42.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|.-|.+ ++..|+..|++|.++|.+. +..+.+.+.|+.+. .+..+.. ..+|+|++..
T Consensus 2 ~i~iiG~G~mG~~-~a~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~--~~~~~~~-----~~~Dvvi~~v 64 (296)
T 2gf2_A 2 PVGFIGLGNMGNP-MAKNLMKHGYPLIIYDVFP-DACKEFQDAGEQVV--SSPADVA-----EKADRIITML 64 (296)
T ss_dssp CEEEECCSTTHHH-HHHHHHHTTCCEEEECSST-HHHHHHHTTTCEEC--SSHHHHH-----HHCSEEEECC
T ss_pred eEEEEeccHHHHH-HHHHHHHCCCEEEEEeCCH-HHHHHHHHcCCeec--CCHHHHH-----hcCCEEEEeC
Confidence 4889999999986 4677777899999998543 34455666676542 1111111 1478888873
No 264
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=64.69 E-value=3.9 Score=42.72 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=27.6
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.++|+|||.|.+|+++ |..|+..|++|...|.
T Consensus 122 ~~~V~IIGgGpAGl~a-A~~L~~~G~~V~v~e~ 153 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAA-AEELRAKGYEVHVYDR 153 (456)
T ss_dssp CCCEEEECCSHHHHHH-HHHHHHHTCCEEEECS
T ss_pred CCEEEEECCCHHHHHH-HHHHHHCCCeEEEEec
Confidence 3569999999999987 7778888999999984
No 265
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=64.63 E-value=7.1 Score=34.78 Aligned_cols=28 Identities=36% Similarity=0.528 Sum_probs=23.9
Q ss_pred EEEEeCC--CCchHHHHHHHHHHHHcCCCe
Q 009279 183 LIAVSGS--HGKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 183 vI~VTGT--nGKTTTt~ml~~iL~~~G~~v 210 (538)
+|+|+|. .||||.+.+|++.|...|+.+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~g~~v 31 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKV 31 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHCCC-E
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeE
Confidence 6899994 689999999999999988865
No 266
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=64.27 E-value=6.7 Score=36.06 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=27.2
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..+|.|+|.|.-|.+ +|..|+..|++|.+.|.+
T Consensus 19 ~~~I~iiG~G~mG~~-la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQA-IGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHH-HHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCCCEEEEEcCC
Confidence 356999999999986 577778899999999854
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=64.24 E-value=4.9 Score=38.79 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=26.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|.|||.|..|++| |..|+..|.+|...|.
T Consensus 6 DvvIIG~GpAGl~A-A~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 6 DVVIIGSGPAAHTA-AIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCCEEECC
T ss_pred cEEEECCCHHHHHH-HHHHHHCCCCEEEEec
Confidence 48899999999997 7888889999999883
No 268
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=64.05 E-value=4.9 Score=41.12 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
..|+|||.|.+|+++ |..|+.+|. +|.+.|..
T Consensus 7 ~dVvIIGgG~aGlsa-A~~La~~G~~~V~vlE~~ 39 (438)
T 3dje_A 7 SSLLIVGAGTWGTST-ALHLARRGYTNVTVLDPY 39 (438)
T ss_dssp SCEEEECCSHHHHHH-HHHHHHTTCCCEEEEESS
T ss_pred CCEEEECCCHHHHHH-HHHHHHcCCCcEEEEeCC
Confidence 358899999999986 788899999 99998843
No 269
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=63.98 E-value=5.3 Score=39.48 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=37.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|..|..-+..+....|.++. +.|.+.. ..+. +.+.|+. + . +..++.. ....|+|++..
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~-~~~~~~~~~~~~-~-~-~~~~~l~---~~~~D~V~i~t 71 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPA-AAEAIAGAYGCE-V-R-TIDAIEA---AADIDAVVICT 71 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHH-HHHHHHHHTTCE-E-C-CHHHHHH---CTTCCEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHH-HHHHHHHHhCCC-c-C-CHHHHhc---CCCCCEEEEeC
Confidence 4689999999998755445445688877 4664322 2333 3345776 2 2 1111110 01478888754
No 270
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=63.89 E-value=8.9 Score=38.64 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=60.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|+|.|..|+.+ |++|+..|.+|.++|.+... .+.+.+.|+..+-.. .+. ...+|+++- .+..
T Consensus 176 ktV~I~G~GnVG~~~-A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~v~~~---ell----~~~~DIliP-~A~~---- 241 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSL-ASLAAEAGAQLLVADTDTER-VAHAVALGHTAVALE---DVL----STPCDVFAP-CAMG---- 241 (355)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHHH-HHHHHHTTCEECCGG---GGG----GCCCSEEEE-CSCS----
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEEeCCccH-HHHHHhcCCEEeChH---Hhh----cCccceecH-hHHH----
Confidence 579999999999986 77788899999999965321 222344677653111 111 114676642 1111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.+|...+ +... +. -+-|-|.||-+|.-.- ..+|+..|.
T Consensus 242 ----------~~I~~~~-~~~l--k~-~iVie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 242 ----------GVITTEV-ARTL--DC-SVVAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp ----------CCBCHHH-HHHC--CC-SEECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred ----------hhcCHHH-HhhC--CC-CEEEECCCCCCCCHHH-HHHHHhCCE
Confidence 1222222 2221 22 3556788999876333 588888874
No 271
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=63.79 E-value=4.9 Score=41.92 Aligned_cols=31 Identities=29% Similarity=0.221 Sum_probs=25.3
Q ss_pred eEEEEeechhhHHHHHHHHHh-CCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALK-QGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~-~G~~v~g~D~~ 108 (538)
.|+|||.|.+|++| |..|++ .|++|.+.+.+
T Consensus 12 DVvIIGaGisGLsa-A~~L~k~~G~~V~VlE~~ 43 (513)
T 4gde_A 12 DVLVIGAGPTGLGA-AKRLNQIDGPSWMIVDSN 43 (513)
T ss_dssp EEEEECCSHHHHHH-HHHHHHHCCSCEEEEESS
T ss_pred CEEEECCcHHHHHH-HHHHHhhCCCCEEEEECC
Confidence 48899999999998 566654 69999998743
No 272
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=63.69 E-value=5.8 Score=39.37 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=26.9
Q ss_pred CcEEEEe---CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 181 YNLIAVS---GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 181 ~~vI~VT---GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
.+.|.|+ |-.||||++..++..|.+.|++|..+
T Consensus 18 ~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllv 53 (329)
T 2woo_A 18 SLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLI 53 (329)
T ss_dssp TCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 3556666 56889999999999999999997654
No 273
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=63.47 E-value=7.9 Score=37.27 Aligned_cols=34 Identities=32% Similarity=0.456 Sum_probs=30.7
Q ss_pred cCCcEEEEeC----CCCchHHHHHHHHHHHHcCCCeEE
Q 009279 179 EKYNLIAVSG----SHGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 179 ~~~~vI~VTG----TnGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
...+.|.||| +=||+-|++-+..+|+..|++|..
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~ 58 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTS 58 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCccee
Confidence 4679999999 789999999999999999999764
No 274
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=63.45 E-value=6.3 Score=40.05 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=27.3
Q ss_pred CCcEEEEe---CCCCchHHHHHHHHHHHH------cCCCeEE
Q 009279 180 KYNLIAVS---GSHGKSTTASMLAYVLKA------MGDDLTA 212 (538)
Q Consensus 180 ~~~vI~VT---GTnGKTTTt~ml~~iL~~------~G~~v~~ 212 (538)
..++|+|+ |-.|||||+..++..|.. .|++|..
T Consensus 107 ~~~vIav~s~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVll 148 (398)
T 3ez2_A 107 EAYVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILV 148 (398)
T ss_dssp SCEEEEECCSSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEE
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhcchhhcCCCeEEE
Confidence 46899999 557899999999999984 6888654
No 275
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=63.38 E-value=31 Score=38.15 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..|+..|++|.++|.+.
T Consensus 313 ~kV~VIGaG~MG~~-iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSG-IATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHH-HHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHH-HHHHHHhCCCEEEEEECCH
Confidence 46999999988865 6788889999999999753
No 276
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=63.37 E-value=3.5 Score=40.27 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=26.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+..|.+|...|.
T Consensus 9 ~~vvIIG~G~aGl~~-A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTA-AIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCeEEEEec
Confidence 468999999999987 7778889999999883
No 277
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=63.33 E-value=4.4 Score=40.48 Aligned_cols=88 Identities=9% Similarity=0.035 Sum_probs=44.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
+.+|.|||.|..|..-+..+....|.++. +.|.+.. ..+.+ .+.|+..+ .+..++.. ....|+|++...- .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~-~~~~~~~~~g~~~~--~~~~~~l~---~~~~D~V~i~tp~-~ 77 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTED-KREKFGKRYNCAGD--ATMEALLA---REDVEMVIITVPN-D 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHH-HHHHHHHHHTCCCC--SSHHHHHH---CSSCCEEEECSCT-T
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHH-HHHHHHHHcCCCCc--CCHHHHhc---CCCCCEEEEeCCh-H
Confidence 35699999999998654444344477766 5564322 23333 33476541 11111110 0147888875421 2
Q ss_pred CCH-HHHHHHHCCCCeee
Q 009279 153 DNV-EILHAKSVGVPIYK 169 (538)
Q Consensus 153 ~~~-~l~~a~~~gi~vi~ 169 (538)
.|. ...+|.+.|..|+.
T Consensus 78 ~h~~~~~~al~~gk~vl~ 95 (354)
T 3db2_A 78 KHAEVIEQCARSGKHIYV 95 (354)
T ss_dssp SHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCEEEE
Confidence 333 33444455555544
No 278
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=63.20 E-value=5.3 Score=40.27 Aligned_cols=32 Identities=25% Similarity=0.121 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+..|.+|...|..
T Consensus 7 ~dVvIVGaG~aGl~~-A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 7 IDVLINGCGIGGAML-AYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHH-HHHHHhCCCcEEEEeCC
Confidence 458999999999976 88889999999999853
No 279
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=63.16 E-value=4.8 Score=37.90 Aligned_cols=24 Identities=42% Similarity=0.505 Sum_probs=21.0
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVL 203 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL 203 (538)
...+|||+|-| ||||++.+|+..|
T Consensus 24 ~g~iigI~G~~GsGKSTl~k~L~~~l 49 (245)
T 2jeo_A 24 RPFLIGVSGGTASGKSTVCEKIMELL 49 (245)
T ss_dssp CSEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 45699999977 7999999999987
No 280
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=62.96 E-value=8.5 Score=36.55 Aligned_cols=49 Identities=27% Similarity=0.132 Sum_probs=34.1
Q ss_pred ceEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEe
Q 009279 76 GWIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125 (538)
Q Consensus 76 ~~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~ 125 (538)
++++|.|. |+.|.+ +|+.|+.+|++|.+.|.+.....+.+.+.++.++.
T Consensus 28 k~vlVTGas~gIG~a-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~ 77 (260)
T 3gem_A 28 APILITGASQRVGLH-CALRLLEHGHRVIISYRTEHASVTELRQAGAVALY 77 (260)
T ss_dssp CCEEESSTTSHHHHH-HHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEE
T ss_pred CEEEEECCCCHHHHH-HHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEE
Confidence 45777776 466765 57778889999999997766545555555665543
No 281
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=62.93 E-value=24 Score=32.55 Aligned_cols=31 Identities=26% Similarity=0.252 Sum_probs=19.8
Q ss_pred CceEEEEeechhhHHHH--HHHHHhCCCcEEEe
Q 009279 75 KGWIHFVGIGGSGLSAL--AKLALKQGFEVSGS 105 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~l--a~~l~~~G~~v~g~ 105 (538)
.++|+|+|.|.|+..|. +..|..-|..+...
T Consensus 59 a~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~ 91 (220)
T 3etn_A 59 KGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFL 91 (220)
T ss_dssp CCCEEEECSHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHhcCCcEEEe
Confidence 56799999999987653 22233445555544
No 282
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=62.93 E-value=5.4 Score=40.14 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=48.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHH-HHHCC-CeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEG-LLEAG-ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~-~~~~G-a~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
-+|.|||.|..|...++..+...|.++. +.|.+. +..+. +.+.| +.++- +.+++.. ....|+|++...- .
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~-~~a~~~a~~~~~~~~~~--~~~~ll~---~~~vD~V~I~tp~-~ 99 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDD-ALAAEFSAVYADARRIA--TAEEILE---DENIGLIVSAAVS-S 99 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCH-HHHHHHHHHSSSCCEES--CHHHHHT---CTTCCEEEECCCH-H
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCH-HHHHHHHHHcCCCcccC--CHHHHhc---CCCCCEEEEeCCh-H
Confidence 5699999999887666666667898866 445332 22333 33445 33322 1111110 1247888875321 1
Q ss_pred CC-HHHHHHHHCCCCeeeH
Q 009279 153 DN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 153 ~~-~~l~~a~~~gi~vi~~ 170 (538)
.| +...+|.+.|..|+.+
T Consensus 100 ~H~~~~~~al~aGkhVl~E 118 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVLVD 118 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEe
Confidence 23 3345566777777765
No 283
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=62.93 E-value=5.3 Score=41.02 Aligned_cols=31 Identities=35% Similarity=0.412 Sum_probs=27.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|++| |..|+..|.+|.+.+.
T Consensus 6 ~~v~iiG~G~~Gl~a-A~~l~~~g~~v~v~E~ 36 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAA-ATALRKAGLSVAVIEA 36 (453)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCcEEEEEC
Confidence 468899999999987 7778889999999874
No 284
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=62.81 E-value=5.5 Score=38.99 Aligned_cols=107 Identities=19% Similarity=0.163 Sum_probs=60.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|+..|.+|.++|...... ..+.. ....+++. ...|+|++..-..+...
T Consensus 123 ~tvGIIGlG~IG~~v-A~~l~~~G~~V~~~dr~~~~~------~~~~~--~~~l~ell-----~~aDiV~l~~P~t~~t~ 188 (290)
T 3gvx_A 123 KALGILGYGGIGRRV-AHLAKAFGMRVIAYTRSSVDQ------NVDVI--SESPADLF-----RQSDFVLIAIPLTDKTR 188 (290)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHTCEEEEECSSCCCT------TCSEE--CSSHHHHH-----HHCSEEEECCCCCTTTT
T ss_pred chheeeccCchhHHH-HHHHHhhCcEEEEEecccccc------ccccc--cCChHHHh-----hccCeEEEEeeccccch
Confidence 569999999999975 777788899999999653210 01111 11111111 14688777542211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
.++.. +.+... + ...+-|--+.|+.-...-+...|++.+..
T Consensus 189 ----------~li~~-~~l~~m-k-~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 189 ----------GMVNS-RLLANA-R-KNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp ----------TCBSH-HHHTTC-C-TTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred ----------hhhhH-HHHhhh-h-cCceEEEeehhcccCCcchhhhhhhccce
Confidence 11211 223222 2 23566666778888888888888876543
No 285
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=62.80 E-value=5.2 Score=39.51 Aligned_cols=90 Identities=12% Similarity=-0.001 Sum_probs=45.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
+.+|.|||.|..|..-+..+....+.++. +.|.+... .+. +.+.|+.-... +.+++.. ....|+|++.... .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~-~~~~a~~~~~~~~~~-~~~~ll~---~~~~D~V~i~tp~-~ 78 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLES-AQAFANKYHLPKAYD-KLEDMLA---DESIDVIYVATIN-Q 78 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSST-TCC---CCCCSCEES-CHHHHHT---CTTCCEEEECSCG-G
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHH-HHHHHHHcCCCcccC-CHHHHhc---CCCCCEEEECCCc-H
Confidence 35689999999998765555555666666 45644332 222 22346531121 1111110 0147888875321 2
Q ss_pred CCH-HHHHHHHCCCCeeeH
Q 009279 153 DNV-EILHAKSVGVPIYKR 170 (538)
Q Consensus 153 ~~~-~l~~a~~~gi~vi~~ 170 (538)
.+. ...+|.+.|..|+.+
T Consensus 79 ~h~~~~~~al~aGk~Vl~E 97 (329)
T 3evn_A 79 DHYKVAKAALLAGKHVLVE 97 (329)
T ss_dssp GHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEc
Confidence 233 344555666666543
No 286
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=62.65 E-value=5.9 Score=39.23 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=61.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCC-CCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGH-SVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~-~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|||+|..|++. |+.|+..|.+|.++|..... ..++....+. ..+++. ...|+|++..- . .
T Consensus 140 ~tvGIiG~G~IG~~v-A~~l~~~G~~V~~~dr~~~~------~~~~~~~~~~~~l~ell-----~~aDiV~l~~P--l-t 204 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKV-AESLQAWGFPLRCWSRSRKS------WPGVESYVGREELRAFL-----NQTRVLINLLP--N-T 204 (315)
T ss_dssp CCEEEECCSHHHHHH-HHHHHTTTCCEEEEESSCCC------CTTCEEEESHHHHHHHH-----HTCSEEEECCC--C-C
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEEcCCchh------hhhhhhhcccCCHHHHH-----hhCCEEEEecC--C-c
Confidence 569999999999974 78888899999999964321 0122221110 111111 14687777531 1 1
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
+... .++.. +.+... +...+-|--+.|+--...-|...|+...
T Consensus 205 ~~t~-------~li~~-~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g~ 247 (315)
T 3pp8_A 205 AQTV-------GIINS-ELLDQL--PDGAYVLNLARGVHVQEADLLAALDSGK 247 (315)
T ss_dssp GGGT-------TCBSH-HHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred hhhh-------hhccH-HHHhhC--CCCCEEEECCCChhhhHHHHHHHHHhCC
Confidence 1111 11221 223222 2347778888888888888888887643
No 287
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=62.53 E-value=5.5 Score=39.92 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+..|.+|...|..
T Consensus 12 ~dVvIVGaG~aGl~~-A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 12 RRAEVAGGGFAGLTA-AIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHH-HHHHHHCCCCEEEEecC
Confidence 468999999999986 88889999999999843
No 288
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=62.32 E-value=5.6 Score=41.58 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|.+|+++ |..|+.+|.+|.+.+..
T Consensus 14 ~~v~iiG~G~~Gl~a-A~~l~~~g~~v~v~E~~ 45 (504)
T 1sez_A 14 KRVAVIGAGVSGLAA-AYKLKIHGLNVTVFEAE 45 (504)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTSCEEEEECSS
T ss_pred CeEEEECCCHHHHHH-HHHHHHCCCcEEEEEeC
Confidence 568999999999987 78888899999998743
No 289
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=62.29 E-value=5.9 Score=39.39 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|.|||+|..|++. |+.|+..|.+|.++|..
T Consensus 141 ~tvGIIGlG~IG~~v-A~~l~~~G~~V~~~dr~ 172 (324)
T 3hg7_A 141 RTLLILGTGSIGQHI-AHTGKHFGMKVLGVSRS 172 (324)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred ceEEEEEECHHHHHH-HHHHHhCCCEEEEEcCC
Confidence 569999999999975 77778899999999964
No 290
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=62.17 E-value=4.8 Score=36.61 Aligned_cols=25 Identities=40% Similarity=0.482 Sum_probs=21.3
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLK 204 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~ 204 (538)
+..+|+|+|-| ||||++.+|+..+.
T Consensus 5 ~~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 5 KPFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45699999976 59999999999885
No 291
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=62.02 E-value=21 Score=35.19 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=42.6
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChh---HHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSY---MEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~---~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
+|.|+|.|..|.+. |..|+.+|. ++...|.....- +.++.. ....+.-....+.+. .+|+||
T Consensus 2 kv~ViGaG~vG~~~-a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~------~aDvVi 74 (314)
T 3nep_X 2 KVTVIGAGNVGATV-AECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTE------DSDVCI 74 (314)
T ss_dssp EEEEECCSHHHHHH-HHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGT------TCSEEE
T ss_pred EEEEECCCHHHHHH-HHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhC------CCCEEE
Confidence 58899999999875 676776776 899999765421 112211 233443223333333 689999
Q ss_pred EcCCCCC
Q 009279 146 ASSAIPQ 152 (538)
Q Consensus 146 vsp~i~~ 152 (538)
+..|.|+
T Consensus 75 i~ag~~~ 81 (314)
T 3nep_X 75 ITAGLPR 81 (314)
T ss_dssp ECCCC--
T ss_pred ECCCCCC
Confidence 9888764
No 292
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=62.00 E-value=6 Score=39.87 Aligned_cols=110 Identities=13% Similarity=0.042 Sum_probs=66.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|+..|.+|.++|... ....+.+.|+... ...+++. ...|+|++..-..+...
T Consensus 161 ~tvGIIGlG~IG~~v-A~~l~~~G~~V~~~d~~~--~~~~~~~~g~~~~--~~l~ell-----~~aDiV~l~~Plt~~t~ 230 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLV-AGYGRAFGMNVLVWGREN--SKERARADGFAVA--ESKDALF-----EQSDVLSVHLRLNDETR 230 (352)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSHH--HHHHHHHTTCEEC--SSHHHHH-----HHCSEEEECCCCSTTTT
T ss_pred CEEEEEeECHHHHHH-HHHHHhCCCEEEEECCCC--CHHHHHhcCceEe--CCHHHHH-----hhCCEEEEeccCcHHHH
Confidence 569999999999985 777788999999999531 1234556787642 1111111 14788887532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
.++.. +.+... + ...+-|--+.|+--...-+...|++...
T Consensus 231 ----------~li~~-~~l~~m-k-~gailIN~aRg~~vd~~aL~~aL~~g~i 270 (352)
T 3gg9_A 231 ----------SIITV-ADLTRM-K-PTALFVNTSRAELVEENGMVTALNRGRP 270 (352)
T ss_dssp ----------TCBCH-HHHTTS-C-TTCEEEECSCGGGBCTTHHHHHHHHTSS
T ss_pred ----------HhhCH-HHHhhC-C-CCcEEEECCCchhhcHHHHHHHHHhCCc
Confidence 11221 223222 2 2355666666888888888888887654
No 293
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=61.96 E-value=5.6 Score=41.27 Aligned_cols=31 Identities=19% Similarity=0.062 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|.|||.|.+|.+| |..|+..|.+|...+.+
T Consensus 13 dvvVIGaG~~GL~a-A~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 13 DVIVLGTGITECIL-SGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCeEEEEeCC
Confidence 48899999999987 77888899999999864
No 294
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=61.88 E-value=5.9 Score=40.06 Aligned_cols=32 Identities=31% Similarity=0.382 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 27 ~dV~IVGaG~aGl~~-A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTM-AKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEEECS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 468999999999975 88889999999999843
No 295
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=61.72 E-value=29 Score=31.30 Aligned_cols=70 Identities=13% Similarity=0.015 Sum_probs=41.3
Q ss_pred eEEEEe-echhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCC---CcCCCCCCCCCCEEEEcCCCCC
Q 009279 77 WIHFVG-IGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVS---NIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 77 ~v~vlG-~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~---~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
+|+|.| .|..|... ++.|+.+|++|.+.+.+.... ..+ .++.++.++-.+ .+. ...+.+|.||-..++..
T Consensus 2 ~ilItGatG~iG~~l-~~~L~~~g~~V~~~~R~~~~~-~~~--~~~~~~~~D~~d~~~~~~--~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSL-LKSLSTTDYQIYAGARKVEQV-PQY--NNVKAVHFDVDWTPEEMA--KQLHGMDAIINVSGSGG 75 (219)
T ss_dssp EEEEESTTSHHHHHH-HHHHTTSSCEEEEEESSGGGS-CCC--TTEEEEECCTTSCHHHHH--TTTTTCSEEEECCCCTT
T ss_pred eEEEECCCCHHHHHH-HHHHHHCCCEEEEEECCccch-hhc--CCceEEEecccCCHHHHH--HHHcCCCEEEECCcCCC
Confidence 588998 56788764 666677899999998653211 111 455555542211 111 11235788888777654
No 296
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=61.59 E-value=14 Score=36.37 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=41.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCC--h-hHHHHHHCCC----eEEeC-CCCCCcCCCCCCCCCCEE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWS--S-YMEGLLEAGA----NLHIG-HSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~--~-~~~~~~~~Ga----~~~~~-~~~~~~~~~~~~~~~d~v 144 (538)
+.||.|+|.|..|.+. +..|+.+|. ++.+.|.+.. + .+.++. .+. .+.+. .+.+.+ +.+|+|
T Consensus 7 ~~KI~IiGaG~vG~~~-a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~-~~~~~~~~~~i~~~~~~a~------~~aDvV 78 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASA-AFTMALRQTANELVLIDVFKEKAIGEAMDIN-HGLPFMGQMSLYAGDYSDV------KDCDVI 78 (318)
T ss_dssp CCCEEEECCSHHHHHH-HHHHHHTTCSSEEEEECCC---CCHHHHHHT-TSCCCTTCEEEC--CGGGG------TTCSEE
T ss_pred CCEEEEECCCHHHHHH-HHHHHhCCCCCEEEEEeCChHHHHHHHHHHH-HhHHhcCCeEEEECCHHHh------CCCCEE
Confidence 3579999999999985 666777787 8999997643 1 122222 222 12121 122223 368999
Q ss_pred EEcCCCCC
Q 009279 145 VASSAIPQ 152 (538)
Q Consensus 145 vvsp~i~~ 152 (538)
|+..+.|.
T Consensus 79 ii~~g~p~ 86 (318)
T 1y6j_A 79 VVTAGANR 86 (318)
T ss_dssp EECCCC--
T ss_pred EEcCCCCC
Confidence 99888765
No 297
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=61.47 E-value=8 Score=34.19 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=24.4
Q ss_pred cEEEEeCC--CCchHHHHHHHHHHHHcCCCe
Q 009279 182 NLIAVSGS--HGKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 182 ~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v 210 (538)
++|.|+|. .||||.+..|+.-|...|+.+
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~ 32 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINN 32 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCceE
Confidence 47888885 789999999999998777764
No 298
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=61.43 E-value=3.8 Score=40.82 Aligned_cols=87 Identities=14% Similarity=0.132 Sum_probs=43.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
.+|.|||.|..|..-+..+....|.++. +.|.+. +..+.+ .+.|+.-......+-+.. ..+|+|++.... ..
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~-~~~~~~~~~~~~~~~~~~~~~ll~~----~~~D~V~i~tp~-~~ 76 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVRE-DRLREMKEKLGVEKAYKDPHELIED----PNVDAVLVCSST-NT 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCH-HHHHHHHHHHTCSEEESSHHHHHHC----TTCCEEEECSCG-GG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCH-HHHHHHHHHhCCCceeCCHHHHhcC----CCCCEEEEcCCC-cc
Confidence 3689999999998754444444577776 456432 223333 334654222211111110 147888885421 12
Q ss_pred CH-HHHHHHHCCCCee
Q 009279 154 NV-EILHAKSVGVPIY 168 (538)
Q Consensus 154 ~~-~l~~a~~~gi~vi 168 (538)
+. ...+|.+.|..|+
T Consensus 77 h~~~~~~al~~gk~v~ 92 (344)
T 3ezy_A 77 HSELVIACAKAKKHVF 92 (344)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHhcCCeEE
Confidence 22 3334444455444
No 299
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=61.32 E-value=5.1 Score=39.51 Aligned_cols=30 Identities=23% Similarity=0.192 Sum_probs=26.6
Q ss_pred eEEEEeechhhHHHHHHHHHh---CCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALK---QGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~---~G~~v~g~D~ 107 (538)
+|.|||.|.+|.++ |..|+. .|.+|.+.|.
T Consensus 3 dV~IIGaG~aGl~~-A~~L~~~~~~G~~V~v~Ek 35 (342)
T 3qj4_A 3 QVLIVGAGMTGSLC-AALLRRQTSGPLYLAVWDK 35 (342)
T ss_dssp EEEEECCSHHHHHH-HHHHHSCC-CCEEEEEECS
T ss_pred cEEEECCcHHHHHH-HHHHHhhccCCceEEEEEC
Confidence 58899999999986 788888 8999999984
No 300
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=61.24 E-value=5.6 Score=38.51 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=25.9
Q ss_pred EEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 78 v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
|.|||.|..|++| |..|+..|.+|...|.
T Consensus 9 vvIIG~GpAGl~a-A~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 9 IAIIGAGPAGMTA-AVYASRANLKTVMIER 37 (312)
T ss_dssp EEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred EEEECCCHHHHHH-HHHHHHCCCCEEEEec
Confidence 7899999999997 7888889999999883
No 301
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=61.23 E-value=6 Score=39.35 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=60.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC-CCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG-HSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|||+|..|.+. |+.|...|.+|.++|...... .++..... ...+++. +..|+|++..- ..
T Consensus 138 ktvGIiGlG~IG~~v-A~~l~~~G~~V~~~dr~~~~~------~~~~~~~~~~~l~ell-----~~aDvV~l~lP---lt 202 (324)
T 3evt_A 138 QQLLIYGTGQIGQSL-AAKASALGMHVIGVNTTGHPA------DHFHETVAFTATADAL-----ATANFIVNALP---LT 202 (324)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESSCCCC------TTCSEEEEGGGCHHHH-----HHCSEEEECCC---CC
T ss_pred CeEEEECcCHHHHHH-HHHHHhCCCEEEEECCCcchh------HhHhhccccCCHHHHH-----hhCCEEEEcCC---Cc
Confidence 569999999999975 777788999999999643210 01111111 1111111 14688877531 11
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcCC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMGD 208 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G~ 208 (538)
+... .++.. +.+... + ...+-|--+.|+.-...-|...|++...
T Consensus 203 ~~t~-------~li~~-~~l~~m-k-~gailIN~aRG~~vd~~aL~~aL~~g~i 246 (324)
T 3evt_A 203 PTTH-------HLFST-ELFQQT-K-QQPMLINIGRGPAVDTTALMTALDHHQL 246 (324)
T ss_dssp GGGT-------TCBSH-HHHHTC-C-SCCEEEECSCGGGBCHHHHHHHHHTTSC
T ss_pred hHHH-------HhcCH-HHHhcC-C-CCCEEEEcCCChhhhHHHHHHHHHhCCc
Confidence 1110 11221 333322 2 2355666667888888888888876443
No 302
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=61.21 E-value=7.8 Score=39.27 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=0.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCCh------------hHHHHHHCCCeEEeCCCCCC----cCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSS------------YMEGLLEAGANLHIGHSVSN----IQGNDGSR 139 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~------------~~~~~~~~Ga~~~~~~~~~~----~~~~~~~~ 139 (538)
++|.|||.|.+|+-+ |..|+..|.+|+..+..... +.+.+.+.|+.+..+..... ++
T Consensus 147 ~~vvVIGgG~~g~E~-A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~~------ 219 (385)
T 3klj_A 147 GKAFIIGGGILGIEL-AQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLIR------ 219 (385)
T ss_dssp SCEEEECCSHHHHHH-HHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHHH------
T ss_pred CeEEEECCCHHHHHH-HHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEEe------
Q ss_pred CCCEEEEcCCCCCCCHHH
Q 009279 140 FPNAVVASSAIPQDNVEI 157 (538)
Q Consensus 140 ~~d~vvvsp~i~~~~~~l 157 (538)
+|+||+.+|..+....+
T Consensus 220 -~D~vv~a~G~~p~~~~~ 236 (385)
T 3klj_A 220 -SSCVITAVGVKPNLDFI 236 (385)
T ss_dssp -HSEEEECCCEEECCGGG
T ss_pred -cCeEEECcCcccChhhh
No 303
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=61.21 E-value=6.3 Score=38.66 Aligned_cols=34 Identities=29% Similarity=0.237 Sum_probs=23.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEE-EecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~ 108 (538)
+.+|.|||.|..|..-+..+....+.++. +.|.+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~ 43 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRN 43 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 35699999999999764444445678877 46743
No 304
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=61.19 E-value=6.3 Score=39.31 Aligned_cols=33 Identities=27% Similarity=0.154 Sum_probs=28.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||+|..|++. |+.++..|.+|.++|...
T Consensus 146 ~~vgIiG~G~IG~~~-A~~l~~~G~~V~~~d~~~ 178 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVA-IKLFKGFGAKVIAYDPYP 178 (333)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEECCCc
Confidence 469999999999985 777788999999999654
No 305
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=61.18 E-value=21 Score=35.41 Aligned_cols=71 Identities=18% Similarity=0.159 Sum_probs=44.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh---hHHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS---YMEGLLE------AGANLHIGHSVSNIQGNDGSRFPNA 143 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~---~~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~ 143 (538)
.++|.|+|.|..|.+. |..|+..|. ++...|.+... .+.++.. .++.+..+ +...+ +.+|+
T Consensus 5 ~~kI~ViGaG~vG~~~-a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~-~~~a~------~~aDv 76 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSY-AFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG-TYEDC------KDADI 76 (326)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE-CGGGG------TTCSE
T ss_pred CCEEEEECCCHHHHHH-HHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC-cHHHh------CCCCE
Confidence 4679999999999875 677777786 89999964321 1112322 12333222 22223 36899
Q ss_pred EEEcCCCCCC
Q 009279 144 VVASSAIPQD 153 (538)
Q Consensus 144 vvvsp~i~~~ 153 (538)
||+..|.|+.
T Consensus 77 Vvi~ag~p~k 86 (326)
T 3pqe_A 77 VCICAGANQK 86 (326)
T ss_dssp EEECCSCCCC
T ss_pred EEEecccCCC
Confidence 9998887653
No 306
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=61.13 E-value=7.4 Score=37.18 Aligned_cols=32 Identities=34% Similarity=0.261 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
+|.|||.|..|.+ +|..|+..|++|.++|.+.
T Consensus 2 ~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQL-WLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHH-HHHHHHhCCCCEEEEEcCc
Confidence 5899999999985 5777888999999998654
No 307
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=61.03 E-value=7.5 Score=36.60 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=41.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC----cEEEecCCCChhHHHHHH-CCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF----EVSGSDLVWSSYMEGLLE-AGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~----~v~g~D~~~~~~~~~~~~-~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
.+|.|||.|.-|.+ ++..|...|+ +|.++|.+. +..+.+.+ .|+...-. ..+.+. .+|+|++..
T Consensus 3 ~~i~iIG~G~mG~~-~a~~l~~~g~~~~~~V~~~~r~~-~~~~~~~~~~g~~~~~~-~~e~~~------~aDvVilav 71 (247)
T 3gt0_A 3 KQIGFIGCGNMGMA-MIGGMINKNIVSSNQIICSDLNT-ANLKNASEKYGLTTTTD-NNEVAK------NADILILSI 71 (247)
T ss_dssp CCEEEECCSHHHHH-HHHHHHHTTSSCGGGEEEECSCH-HHHHHHHHHHCCEECSC-HHHHHH------HCSEEEECS
T ss_pred CeEEEECccHHHHH-HHHHHHhCCCCCCCeEEEEeCCH-HHHHHHHHHhCCEEeCC-hHHHHH------hCCEEEEEe
Confidence 35899999999986 5677778998 999998643 23444443 47664211 111111 478998875
No 308
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=60.99 E-value=5.3 Score=43.81 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
..|.|||.|.+|+++ |..|+.+|.+|.+.|.
T Consensus 273 ~DVvIIGgGiaGlsa-A~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 273 REAAIIGGGIASALL-SLALLRRGWQVTLYCA 303 (676)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEEES
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCeEEEEeC
Confidence 468999999999986 7888999999999984
No 309
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=60.94 E-value=6.3 Score=38.53 Aligned_cols=32 Identities=28% Similarity=0.236 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|..
T Consensus 4 ~~vvIIG~G~aGl~~-A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSA-GYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHSSCCEEEECCS
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCCEEEEECC
Confidence 358899999999987 67778899999999843
No 310
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=60.83 E-value=7.7 Score=38.66 Aligned_cols=107 Identities=13% Similarity=0.081 Sum_probs=59.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.+...|.+|.++|...... +.+ ++.. .....++. ...|+|+..... .+
T Consensus 147 ~~vgIiG~G~IG~~~-A~~l~~~G~~V~~~d~~~~~~---~~~-~~~~--~~~l~ell-----~~aDvV~l~~p~---~~ 211 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVF-MQIMEGFGAKVITYDIFRNPE---LEK-KGYY--VDSLDDLY-----KQADVISLHVPD---VP 211 (333)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCHH---HHH-TTCB--CSCHHHHH-----HHCSEEEECSCC---CG
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEECCCcchh---HHh-hCee--cCCHHHHH-----hhCCEEEEcCCC---cH
Confidence 469999999999985 777778999999999655432 222 2321 11111111 147888875421 11
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
... .++.+ +.+... ++..++--+|+ |.--...-+...|++.+
T Consensus 212 ~t~-------~li~~-~~l~~m-k~ga~lIn~ar-g~~vd~~aL~~aL~~g~ 253 (333)
T 1j4a_A 212 ANV-------HMIND-ESIAKM-KQDVVIVNVSR-GPLVDTDAVIRGLDSGK 253 (333)
T ss_dssp GGT-------TCBSH-HHHHHS-CTTEEEEECSC-GGGBCHHHHHHHHHHTS
T ss_pred HHH-------HHHhH-HHHhhC-CCCcEEEECCC-CcccCHHHHHHHHHhCC
Confidence 111 12221 233332 33334444555 77666677777787654
No 311
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=60.79 E-value=5.8 Score=38.39 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=26.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|..|++| |..|+..|.+|...|.
T Consensus 8 DVvIIGaGpAGlsA-A~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 8 DCAVIGAGPAGLNA-SLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHH-HHHHHHCCCCEEEEeC
Confidence 37899999999987 7788889999999883
No 312
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=60.74 E-value=6.9 Score=34.46 Aligned_cols=30 Identities=40% Similarity=0.358 Sum_probs=26.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
+|.|||.|.+|+.+ |..|+..|.+|...|.
T Consensus 3 ~vvIIGgG~~Gl~~-A~~l~~~g~~v~lie~ 32 (180)
T 2ywl_A 3 DVIVVGGGPSGLSA-ALFLARAGLKVLVLDG 32 (180)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEEEC
T ss_pred eEEEECCCHHHHHH-HHHHHHCCCcEEEEeC
Confidence 57899999999986 7778889999999884
No 313
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=60.72 E-value=6.7 Score=33.18 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=24.5
Q ss_pred CCCceEEEEeechhhHHHHHHHHHhCCCcEEEe
Q 009279 73 NRKGWIHFVGIGGSGLSALAKLALKQGFEVSGS 105 (538)
Q Consensus 73 ~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~ 105 (538)
+++++++|+|.|..|...+..+....|+++.|.
T Consensus 2 ~~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~ 34 (141)
T 3nkl_A 2 NAKKKVLIYGAGSAGLQLANMLRQGKEFHPIAF 34 (141)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCcEEEEE
Confidence 456789999999999986555544458888875
No 314
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=60.71 E-value=6.5 Score=39.16 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=28.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|+|+|..|++. |+.|+..|.+|.++|...
T Consensus 147 ~~vgIiG~G~IG~~~-A~~l~~~G~~V~~~d~~~ 179 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVA-AQIFHGMGATVIGEDVFE 179 (331)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEECCCc
Confidence 469999999999985 777778999999999654
No 315
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=60.61 E-value=6.2 Score=38.27 Aligned_cols=31 Identities=39% Similarity=0.446 Sum_probs=26.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+..|.+|...|.
T Consensus 17 ~dvvIIG~G~aGl~a-A~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 17 FDVVIVGAGAAGFSA-AVYAARSGFSVAILDK 47 (319)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CcEEEECcCHHHHHH-HHHHHhCCCcEEEEeC
Confidence 458899999999987 7778889999999883
No 316
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=60.56 E-value=7.7 Score=38.83 Aligned_cols=104 Identities=21% Similarity=0.135 Sum_probs=47.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+ +|+.++..|.+|.++|..... ..++.. ..+..++. ...|+|++..- ..+
T Consensus 172 ktiGIIGlG~IG~~-vA~~l~~~G~~V~~~dr~~~~------~~~~~~--~~sl~ell-----~~aDvVil~vP---~t~ 234 (340)
T 4dgs_A 172 KRIGVLGLGQIGRA-LASRAEAFGMSVRYWNRSTLS------GVDWIA--HQSPVDLA-----RDSDVLAVCVA---ASA 234 (340)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTTCEEEEECSSCCT------TSCCEE--CSSHHHHH-----HTCSEEEECC-------
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCEEEEEcCCccc------ccCcee--cCCHHHHH-----hcCCEEEEeCC---CCH
Confidence 56999999999997 477788899999999965332 122221 11111111 14788877531 111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.... ++.+ +.+... +...+-|--+.|+--...-+.+.|+..
T Consensus 235 ~t~~-------li~~-~~l~~m--k~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 235 ATQN-------IVDA-SLLQAL--GPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp -------------CH-HHHHHT--TTTCEEEECSCC--------------C
T ss_pred HHHH-------HhhH-HHHhcC--CCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 1111 1111 333332 223566777778777777777777654
No 317
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=60.53 E-value=5.7 Score=39.10 Aligned_cols=31 Identities=6% Similarity=0.059 Sum_probs=21.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEE-EecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVS-GSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~ 107 (538)
+|.|||.|..|..-+..+....+.++. +.|.
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~ 34 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR 34 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 588999999998754444444566664 5664
No 318
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=60.51 E-value=50 Score=28.93 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=21.4
Q ss_pred hcCCCceEEEEeechhhHHHHH--HHHHhCCCcEEEec
Q 009279 71 FKNRKGWIHFVGIGGSGLSALA--KLALKQGFEVSGSD 106 (538)
Q Consensus 71 ~~~~~~~v~vlG~G~sG~~~la--~~l~~~G~~v~g~D 106 (538)
+....++|+|+|.|.|+..|.. ..|...|..+...+
T Consensus 45 i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 82 (183)
T 2xhz_A 45 MFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVH 82 (183)
T ss_dssp HHTCSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECC
T ss_pred HHhCCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeC
Confidence 3333347999999999975421 22233466665543
No 319
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=60.50 E-value=9.8 Score=37.30 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=24.9
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
..+|++.|-| |||||...|+..++..+.++
T Consensus 100 g~vi~lvG~nGsGKTTll~~Lag~l~~~~g~V 131 (302)
T 3b9q_A 100 PAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKV 131 (302)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 4588888877 79999999999998776554
No 320
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=60.47 E-value=5.8 Score=36.04 Aligned_cols=25 Identities=32% Similarity=0.432 Sum_probs=21.5
Q ss_pred EEEEeCCCC--chHHHHHHHHHHHHcC
Q 009279 183 LIAVSGSHG--KSTTASMLAYVLKAMG 207 (538)
Q Consensus 183 vI~VTGTnG--KTTTt~ml~~iL~~~G 207 (538)
+|+|+|-|| |||+..+|+..++..|
T Consensus 3 ~i~i~G~nG~GKTTll~~l~g~~~~~G 29 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLIHKASEVLKSSG 29 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCChHHHHHHHHHhhcccCC
Confidence 678888775 9999999999998666
No 321
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=60.43 E-value=5 Score=44.20 Aligned_cols=31 Identities=19% Similarity=0.005 Sum_probs=27.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
..|+|||.|.+|+++ |..|+.+|.+|.+.|.
T Consensus 265 ~DVvIIGgGiaGlsa-A~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 265 DDIAIIGGGIVSALT-ALALQRRGAVVTLYCA 295 (689)
T ss_dssp SSEEEECCSHHHHHH-HHHHHTTTCCEEEEES
T ss_pred CCEEEECCcHHHHHH-HHHHHHCCCcEEEEeC
Confidence 458999999999986 8888999999999984
No 322
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=60.32 E-value=3.8 Score=38.74 Aligned_cols=31 Identities=16% Similarity=0.047 Sum_probs=27.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.-|.+ +|..|+..|++|.++|.
T Consensus 7 mkI~IIG~G~~G~s-LA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVN-MAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSC-HHHHHHHTTCEEEECSS
T ss_pred cEEEEEeeCHHHHH-HHHHHHHCCCEEEEecC
Confidence 46999999999986 57888889999999984
No 323
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.30 E-value=5.2 Score=44.07 Aligned_cols=32 Identities=31% Similarity=0.453 Sum_probs=28.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
+++|+|||.|.+|+++ |..|+.+|++|...|.
T Consensus 391 ~~~VvIIGgG~AGl~a-A~~La~~G~~V~liE~ 422 (690)
T 3k30_A 391 DARVLVVGAGPSGLEA-ARALGVRGYDVVLAEA 422 (690)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHHTCEEEEECS
T ss_pred cceEEEECCCHHHHHH-HHHHHHCCCeEEEEec
Confidence 4579999999999997 7778888999999985
No 324
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=60.17 E-value=7 Score=38.80 Aligned_cols=33 Identities=36% Similarity=0.318 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||.|.-|.+ +|..++..|++|...|.+.
T Consensus 7 ~~VaViGaG~MG~g-iA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRS-WAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHH-HHHHHHhCCCeEEEEECCH
Confidence 57999999988886 5777788999999999653
No 325
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=60.10 E-value=12 Score=37.01 Aligned_cols=89 Identities=8% Similarity=0.016 Sum_probs=46.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHHHHHC-CCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEGLLEA-GANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQD 153 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~ 153 (538)
-+|.|||.|..|....+..|...|.++. +.|.+...-..-+.+. ++.++ .+..++.. ....|+|++...- ..
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~--~~~~~ll~---~~~~D~V~i~tp~-~~ 78 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFA--ASAEQLIT---DASIDLIACAVIP-CD 78 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBC--SCHHHHHT---CTTCCEEEECSCG-GG
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCccc--CCHHHHhh---CCCCCEEEEeCCh-hh
Confidence 4689999998886444555566788864 6675543222223334 44322 12222210 1147888885421 22
Q ss_pred C-HHHHHHHHCCCCeeeH
Q 009279 154 N-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 154 ~-~~l~~a~~~gi~vi~~ 170 (538)
| +...+|.+.|..|+.+
T Consensus 79 h~~~~~~al~aGkhVl~E 96 (336)
T 2p2s_A 79 RAELALRTLDAGKDFFTA 96 (336)
T ss_dssp HHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHCCCcEEEe
Confidence 3 3344455666666553
No 326
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=59.84 E-value=11 Score=32.23 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=55.7
Q ss_pred CceEEEEee----chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCC
Q 009279 75 KGWIHFVGI----GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 75 ~~~v~vlG~----G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
.++|.|||+ |.-|... ++.|...|++|...+.+..+ + .|+.++- ...++. ...|++++...
T Consensus 14 p~~IavIGaS~~~g~~G~~~-~~~L~~~G~~V~~vnp~~~~-i-----~G~~~~~--s~~el~-----~~vDlvii~vp- 78 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNII-LKDLLSKGFEVLPVNPNYDE-I-----EGLKCYR--SVRELP-----KDVDVIVFVVP- 78 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHH-HHHHHHTTCEEEEECTTCSE-E-----TTEECBS--SGGGSC-----TTCCEEEECSC-
T ss_pred CCeEEEEeecCCCCCHHHHH-HHHHHHCCCEEEEeCCCCCe-E-----CCeeecC--CHHHhC-----CCCCEEEEEeC-
Confidence 467999999 8888865 56667789998877743211 1 3554431 122222 24788888642
Q ss_pred CCCCHHHHHHHHCCCCeeeHHHHHHHHhcCCc-EEEEeCCCCchHHHHHHHHHHHHcCCC
Q 009279 151 PQDNVEILHAKSVGVPIYKRDYWLAKLTEKYN-LIAVSGSHGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 151 ~~~~~~l~~a~~~gi~vi~~~~~l~~~~~~~~-vI~VTGTnGKTTTt~ml~~iL~~~G~~ 209 (538)
+ +.....-+ +.. . ...+ ++-.+||- ..-+.+..++.|.+
T Consensus 79 -~--~~v~~v~~---------~~~-~--~g~~~i~~~~~~~-----~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 79 -P--KVGLQVAK---------EAV-E--AGFKKLWFQPGAE-----SEEIRRFLEKAGVE 118 (138)
T ss_dssp -H--HHHHHHHH---------HHH-H--TTCCEEEECTTSC-----CHHHHHHHHHHTCE
T ss_pred -H--HHHHHHHH---------HHH-H--cCCCEEEEcCccH-----HHHHHHHHHHCCCE
Confidence 1 22222210 111 1 1233 45555553 56667778888865
No 327
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=59.68 E-value=6.2 Score=39.99 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=27.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+|.+|.+.+..
T Consensus 4 ~~v~iiG~G~~Gl~~-A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 4 KKILIVGAGFSGAVI-GRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEEESS
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCcEEEEEec
Confidence 358899999999986 77888889999998843
No 328
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=59.59 E-value=21 Score=35.45 Aligned_cols=72 Identities=19% Similarity=0.242 Sum_probs=43.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh---hHHHHHHC-----CCeEEeCCCCCCcCCCCCCCCCCEE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS---YMEGLLEA-----GANLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~---~~~~~~~~-----Ga~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
.++|.|+|.|..|.+. |..|+.+|. ++...|.+... .+.++... ...+....+...+ +.+|+|
T Consensus 19 ~~kV~ViGaG~vG~~~-a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~------~~aDiV 91 (331)
T 4aj2_A 19 QNKITVVGVGAVGMAC-AISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVT------ANSKLV 91 (331)
T ss_dssp SSEEEEECCSHHHHHH-HHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGG------TTEEEE
T ss_pred CCEEEEECCCHHHHHH-HHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHh------CCCCEE
Confidence 3679999999888874 666677887 88999965321 11123221 1122223333333 368999
Q ss_pred EEcCCCCCC
Q 009279 145 VASSAIPQD 153 (538)
Q Consensus 145 vvsp~i~~~ 153 (538)
|+..|.|+.
T Consensus 92 vi~aG~~~k 100 (331)
T 4aj2_A 92 IITAGARQQ 100 (331)
T ss_dssp EECCSCCCC
T ss_pred EEccCCCCC
Confidence 998887753
No 329
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=59.59 E-value=5.6 Score=41.17 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC--CcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG--FEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G--~~v~g~D~ 107 (538)
.+|.|||.|.+|+++ |..|++.| .+|.+.+.
T Consensus 5 ~~v~IiGaG~~Gl~~-A~~L~~~g~~~~v~v~E~ 37 (475)
T 3lov_A 5 KRLVIVGGGITGLAA-AYYAERAFPDLNITLLEA 37 (475)
T ss_dssp CEEEEECCBHHHHHH-HHHHHHHCTTSEEEEECS
T ss_pred ccEEEECCCHHHHHH-HHHHHHhCCCCCEEEEEC
Confidence 468999999999997 78888889 99999884
No 330
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=59.42 E-value=7.8 Score=37.24 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=27.3
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.++++|+|.|+.|++. +..|+..|++|.+.|.+
T Consensus 119 ~k~vlViGaGg~g~a~-a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGV-LLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHH-HHHHHHcCCEEEEEECC
Confidence 4679999999999986 66667789999999854
No 331
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=59.42 E-value=5.7 Score=41.48 Aligned_cols=32 Identities=31% Similarity=0.374 Sum_probs=27.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
..+|.|||.|.+|+++ |..|+..|.+|.+.+.
T Consensus 33 ~~~v~IiGaG~~Gl~a-A~~l~~~g~~v~vlE~ 64 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSA-AYVLAGAGHQVTVLEA 64 (498)
T ss_dssp CCEEEEECCBHHHHHH-HHHHHHHTCEEEEECS
T ss_pred CCCEEEECCCHHHHHH-HHHHHhCCCeEEEEEC
Confidence 3568999999999987 7788888999999874
No 332
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=59.41 E-value=11 Score=34.11 Aligned_cols=31 Identities=35% Similarity=0.401 Sum_probs=26.5
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCCe
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v 210 (538)
+..+|.|+|. .||||.+.+|+.-|...|+.+
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v 40 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA 40 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcE
Confidence 3468999994 799999999999998888765
No 333
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=59.28 E-value=6.9 Score=40.05 Aligned_cols=31 Identities=26% Similarity=0.045 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|.++ |..|+.+|.+|.+.|.
T Consensus 30 ~dv~IIGaG~aGl~a-A~~l~~~g~~v~v~E~ 60 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVL-AERLASSGQRVLIVDR 60 (397)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CCEEEECccHHHHHH-HHHHHHCCCceEEEec
Confidence 468899999999986 7888889999999984
No 334
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=59.01 E-value=11 Score=36.09 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=34.0
Q ss_pred hhhcCCCceEEEEeec-hhhHHHHHHHHHhCCCcEEEecCCCC---hhHHHHHHCCCeE
Q 009279 69 VDFKNRKGWIHFVGIG-GSGLSALAKLALKQGFEVSGSDLVWS---SYMEGLLEAGANL 123 (538)
Q Consensus 69 ~~~~~~~~~v~vlG~G-~sG~~~la~~l~~~G~~v~g~D~~~~---~~~~~~~~~Ga~~ 123 (538)
++|++ |.++|-|.+ +.|++ +|+.|+..|++|...|.+.+ +..+++.+.|..+
T Consensus 3 ~sL~g--KvalVTGas~GIG~a-iA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~ 58 (254)
T 4fn4_A 3 QSLKN--KVVIVTGAGSGIGRA-IAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV 58 (254)
T ss_dssp GGGTT--CEEEEETTTSHHHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCE
T ss_pred CCCCC--CEEEEeCCCCHHHHH-HHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 45666 456676754 56665 57888899999999997543 2234455556554
No 335
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=58.95 E-value=6.7 Score=38.98 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=45.1
Q ss_pred ceEEEEeechhhHHHHHHHH-HhCCCcEE-EecCCCChhHHHH-HHCC--CeEEeCCCCCCcCCCCCCCCCCEEEEcCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLA-LKQGFEVS-GSDLVWSSYMEGL-LEAG--ANLHIGHSVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l-~~~G~~v~-g~D~~~~~~~~~~-~~~G--a~~~~~~~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
.+|.|||.|..|..-+..+. ...|.++. +.|.+. +..+.+ .+.| +..+ .+.+++.. ...+|+|++...-
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~-~~~~~~~~~~g~~~~~~--~~~~~ll~---~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQ-EAAQKVVEQYQLNATVY--PNDDSLLA---DENVDAVLVTSWG 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSH-HHHHHHHHHTTCCCEEE--SSHHHHHH---CTTCCEEEECSCG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCH-HHHHHHHHHhCCCCeee--CCHHHHhc---CCCCCEEEECCCc
Confidence 36899999999987554444 34677776 456432 223333 3457 3332 22221110 0147888885421
Q ss_pred CCCCH-HHHHHHHCCCCeee
Q 009279 151 PQDNV-EILHAKSVGVPIYK 169 (538)
Q Consensus 151 ~~~~~-~l~~a~~~gi~vi~ 169 (538)
..|. ...+|.+.|..|+.
T Consensus 77 -~~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 77 -PAHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp -GGHHHHHHHHHHTTCEEEE
T ss_pred -hhHHHHHHHHHHCCCcEEE
Confidence 2233 34444555665554
No 336
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.82 E-value=7.5 Score=41.11 Aligned_cols=32 Identities=31% Similarity=0.279 Sum_probs=28.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
-.|+|||.|.+|+++ |..|+.+|.+|...|..
T Consensus 6 ~dVlIVGaG~aGl~~-A~~La~~G~~v~viEr~ 37 (535)
T 3ihg_A 6 VDVLVVGAGLGGLST-AMFLARQGVRVLVVERR 37 (535)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 468999999999986 89999999999999854
No 337
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=58.71 E-value=33 Score=30.29 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=19.5
Q ss_pred CCceEEEEeechhhHHHHH--HHHHhCCCcEEEe
Q 009279 74 RKGWIHFVGIGGSGLSALA--KLALKQGFEVSGS 105 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la--~~l~~~G~~v~g~ 105 (538)
+.++|+|+|.|.|+..|.. ..|..-|..+...
T Consensus 36 ~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~ 69 (186)
T 1m3s_A 36 SSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIV 69 (186)
T ss_dssp HCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEET
T ss_pred cCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEe
Confidence 3467999999999876522 2223345555443
No 338
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=58.71 E-value=7.3 Score=38.53 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=27.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+..|. +|...|..
T Consensus 5 ~~vvIIGaG~aGl~a-A~~l~~~g~~~v~lie~~ 37 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGM-AITLKDFGITDVIILEKG 37 (369)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCCEEEECSS
T ss_pred CcEEEECcCHHHHHH-HHHHHHcCCCcEEEEecC
Confidence 458899999999987 677788999 99999843
No 339
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=58.70 E-value=34 Score=32.38 Aligned_cols=79 Identities=14% Similarity=0.022 Sum_probs=46.1
Q ss_pred ceEEEEeec-hhhHHHHHHHHHhCCCcEEEecCCCCh-hHHHHHHCCCeEEe--C--CCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIG-GSGLSALAKLALKQGFEVSGSDLVWSS-YMEGLLEAGANLHI--G--HSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G-~sG~~~la~~l~~~G~~v~g~D~~~~~-~~~~~~~~Ga~~~~--~--~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
|.++|-|.+ +.|++ +|+.|+..|++|..+|.+..+ -.+.+.+.|..+.. . .++............|++|-.-|
T Consensus 10 KvalVTGas~GIG~a-iA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAG 88 (247)
T 4hp8_A 10 RKALVTGANTGLGQA-IAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAG 88 (247)
T ss_dssp CEEEETTTTSHHHHH-HHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCC
T ss_pred CEEEEeCcCCHHHHH-HHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCC
Confidence 334454543 55665 588889999999999976543 34456666655432 1 11111110001124799998888
Q ss_pred CCCCCH
Q 009279 150 IPQDNV 155 (538)
Q Consensus 150 i~~~~~ 155 (538)
+....|
T Consensus 89 i~~~~~ 94 (247)
T 4hp8_A 89 IIRRAD 94 (247)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876554
No 340
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=58.67 E-value=8.7 Score=37.85 Aligned_cols=33 Identities=30% Similarity=0.245 Sum_probs=28.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++|.|||+|..|++. |+.|...|.+|.++|...
T Consensus 145 ~~vgIIG~G~IG~~~-A~~l~~~G~~V~~~d~~~ 177 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAV-AKRALAFGMRVVYHARTP 177 (311)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEECHHHHHH-HHHHHHCCCEEEEECCCC
Confidence 469999999999985 777778999999999653
No 341
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=58.62 E-value=6.2 Score=38.15 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=26.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEec
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D 106 (538)
.+|+|||.|.+|+++ |..|+..|.+|...|
T Consensus 6 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie 35 (320)
T 1trb_A 6 SKLLILGSGPAGYTA-AVYAARANLQPVLIT 35 (320)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCCEEEC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCcEEEEc
Confidence 458899999999987 777888999999888
No 342
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=58.58 E-value=5.9 Score=39.81 Aligned_cols=32 Identities=31% Similarity=0.268 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHh-CC-CcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK-QG-FEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~-~G-~~v~g~D~~ 108 (538)
-.|+|||.|.+|.++ |..|++ +| .+|.+.|..
T Consensus 22 ~dVvIIG~G~~Gl~~-A~~La~~~G~~~V~vlE~~ 55 (405)
T 2gag_B 22 YDAIIVGGGGHGLAT-AYFLAKNHGITNVAVLEKG 55 (405)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHHHCCCCEEEECSS
T ss_pred CCEEEECcCHHHHHH-HHHHHHhcCCCcEEEEeCC
Confidence 358899999999987 777788 89 999999843
No 343
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=58.54 E-value=7.3 Score=39.09 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=64.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|...|.+|.++|...... + ...|+... ...+++. ...|+|++..-. .+
T Consensus 174 ktvGIIGlG~IG~~v-A~~l~~~G~~V~~~dr~~~~~--~-~~~g~~~~--~~l~ell-----~~sDvV~l~~Pl---t~ 239 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAI-ATRARGFGLAIHYHNRTRLSH--A-LEEGAIYH--DTLDSLL-----GASDIFLIAAPG---RP 239 (345)
T ss_dssp CEEEEESCSHHHHHH-HHHHHTTTCEEEEECSSCCCH--H-HHTTCEEC--SSHHHHH-----HTCSEEEECSCC---CG
T ss_pred CEEEEEEeChhHHHH-HHHHHHCCCEEEEECCCCcch--h-hhcCCeEe--CCHHHHH-----hhCCEEEEecCC---CH
Confidence 569999999999975 777888999999999653211 1 12265542 1111111 157888875321 11
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
+.. .++.. +.+... +...+-|--+.|+---..-|...|+..
T Consensus 240 ~T~-------~li~~-~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 240 ELK-------GFLDH-DRIAKI--PEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp GGT-------TCBCH-HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHH-------HHhCH-HHHhhC--CCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 111 12222 333333 234777777888888888888888763
No 344
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=58.49 E-value=6.8 Score=39.76 Aligned_cols=32 Identities=28% Similarity=0.181 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCc-EEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFE-VSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~-v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+..|.+ |.+.|..
T Consensus 5 ~dVvIVGaG~aGl~~-A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 5 IDILIAGAGIGGLSC-ALALHQAGIGKVTLLESS 37 (410)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCSEEEEEESS
T ss_pred CeEEEECCCHHHHHH-HHHHHhCCCCeEEEEECC
Confidence 358999999999975 8888999999 9999843
No 345
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=58.21 E-value=7.7 Score=37.33 Aligned_cols=30 Identities=27% Similarity=0.243 Sum_probs=25.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC-cEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF-EVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~ 107 (538)
+|+|||.|.+|+++ |..|+.+|. +|...|.
T Consensus 3 dvvIIG~G~aGl~a-A~~l~~~g~~~v~lie~ 33 (311)
T 2q0l_A 3 DCAIIGGGPAGLSA-GLYATRGGVKNAVLFEK 33 (311)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCSSEEEECS
T ss_pred eEEEECccHHHHHH-HHHHHHCCCCcEEEEcC
Confidence 47899999999987 677788899 9999883
No 346
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=58.15 E-value=5.9 Score=40.35 Aligned_cols=32 Identities=25% Similarity=0.057 Sum_probs=26.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhC-CCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ-GFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~-G~~v~g~D~~ 108 (538)
.+|.|||.|.+|+++ |..|+.+ |.+|.+.+..
T Consensus 8 ~~v~IiGaG~~Gl~a-A~~L~~~~g~~v~v~E~~ 40 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTI-AERVATQLDKRVLVLERR 40 (399)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHHSCCCEEEECSS
T ss_pred CCEEEECCCHHHHHH-HHHHHHhCCCCEEEEeCC
Confidence 458899999999987 6777777 9999998843
No 347
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=58.03 E-value=6.9 Score=42.06 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
-.|+|||.|.+|.++ |..|+.+|.+|...|.
T Consensus 33 ~DVvVIGgGi~G~~~-A~~La~rG~~V~LlE~ 63 (571)
T 2rgh_A 33 LDLLIIGGGITGAGV-AVQAAASGIKTGLIEM 63 (571)
T ss_dssp BSEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCcEEEEeC
Confidence 358899999999986 8888999999999984
No 348
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=58.02 E-value=7.6 Score=38.43 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+|.+|...|..
T Consensus 15 ~dvvIIG~G~aGl~a-A~~l~~~g~~v~lie~~ 46 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFA-AFQCGMNNISCRIIESM 46 (360)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCCEEEEecC
Confidence 468899999999987 67778899999999843
No 349
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=57.88 E-value=5.9 Score=35.52 Aligned_cols=28 Identities=29% Similarity=0.443 Sum_probs=0.0
Q ss_pred HHHHhcCCcEEEEeCCC--CchHHHHHHHH
Q 009279 174 LAKLTEKYNLIAVSGSH--GKSTTASMLAY 201 (538)
Q Consensus 174 l~~~~~~~~vI~VTGTn--GKTTTt~ml~~ 201 (538)
.+++..+..+|+|+|.. ||||++.+|+.
T Consensus 1 ~~~~~~~~~~I~i~G~~GsGKST~~~~La~ 30 (203)
T 1uf9_A 1 MGHEAKHPIIIGITGNIGSGKSTVAALLRS 30 (203)
T ss_dssp -----CCCEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCCcccCceEEEEECCCCCCHHHHHHHHHH
No 350
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=57.69 E-value=7.5 Score=37.81 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=26.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+..|.+|...|.
T Consensus 9 ~dvvIIG~G~aGl~a-A~~l~~~g~~v~lie~ 39 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTA-AIYTGRAQLSTLILEK 39 (325)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHHHHH-HHHHHHcCCcEEEEeC
Confidence 458899999999987 6777889999999884
No 351
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=57.66 E-value=7.9 Score=38.02 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=58.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|+..|.+|.++|....+ .|... .....++. ...|+|++..-..+..
T Consensus 125 ~~vgIIG~G~IG~~~-A~~l~~~G~~V~~~dr~~~~-------~~~~~--~~~l~ell-----~~aDvV~l~~P~~~~t- 188 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRV-GKILAALGAQVRGFSRTPKE-------GPWRF--TNSLEEAL-----REARAAVCALPLNKHT- 188 (303)
T ss_dssp CEEEEESCSTHHHHH-HHHHHHTTCEEEEECSSCCC-------SSSCC--BSCSHHHH-----TTCSEEEECCCCSTTT-
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEECCCccc-------cCccc--CCCHHHHH-----hhCCEEEEeCcCchHH-
Confidence 569999999999985 77778899999999964331 02211 11111111 2578888854222111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
..++.+ +.+... ++..++-=+|+ |.--...-+...|+...
T Consensus 189 ---------~~~i~~-~~l~~m-k~gailin~sr-g~~vd~~aL~~aL~~g~ 228 (303)
T 1qp8_A 189 ---------RGLVKY-QHLALM-AEDAVFVNVGR-AEVLDRDGVLRILKERP 228 (303)
T ss_dssp ---------TTCBCH-HHHTTS-CTTCEEEECSC-GGGBCHHHHHHHHHHCT
T ss_pred ---------HHHhCH-HHHhhC-CCCCEEEECCC-CcccCHHHHHHHHHhCC
Confidence 112221 233222 23345555555 76666666777787654
No 352
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=57.54 E-value=5.5 Score=40.05 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=26.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 4 dV~IvGaG~aGl~~-A~~L~~~G~~v~v~E~~ 34 (394)
T 1k0i_A 4 QVAIIGAGPSGLLL-GQLLHKAGIDNVILERQ 34 (394)
T ss_dssp SEEEECCSHHHHHH-HHHHHHHTCCEEEECSS
T ss_pred cEEEECCCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 48899999999975 88888899999999853
No 353
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=57.47 E-value=10 Score=32.75 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=26.7
Q ss_pred hhcCCCceEEEEee----chhhHHHHHHHHHhCCCcEEEecCC
Q 009279 70 DFKNRKGWIHFVGI----GGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 70 ~~~~~~~~v~vlG~----G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+..+.++|.|||+ |.-|... +..|...|++|...+.+
T Consensus 8 ~ll~~p~~IavIGas~~~g~~G~~~-~~~L~~~G~~v~~vnp~ 49 (145)
T 2duw_A 8 GILTSTRTIALVGASDKPDRPSYRV-MKYLLDQGYHVIPVSPK 49 (145)
T ss_dssp HHHHHCCCEEEESCCSCTTSHHHHH-HHHHHHHTCCEEEECSS
T ss_pred HHHhCCCEEEEECcCCCCCChHHHH-HHHHHHCCCEEEEeCCc
Confidence 33433466999999 6677754 56667789998887743
No 354
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=57.46 E-value=7 Score=36.33 Aligned_cols=30 Identities=27% Similarity=0.227 Sum_probs=26.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|.|||.|.+|+.+ |..|+..|.+|...+.
T Consensus 5 dVvVVGgG~aGl~a-A~~la~~g~~v~lie~ 34 (232)
T 2cul_A 5 QVLIVGAGFSGAET-AFWLAQKGVRVGLLTQ 34 (232)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEec
Confidence 47899999999986 7888889999999884
No 355
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=57.44 E-value=7.8 Score=39.94 Aligned_cols=31 Identities=32% Similarity=0.335 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~ 107 (538)
.+|+|||.|.+|+++ |..|+..|. +|.+.|.
T Consensus 7 ~dV~IIGaG~aGl~a-A~~L~~~G~~~~V~v~E~ 39 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVT-AKALLAEKAFDQVTLFER 39 (447)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCCSEEEEECS
T ss_pred CEEEEECccHHHHHH-HHHHHhcCCCCCeEEEec
Confidence 568999999999987 777888999 9999984
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=57.28 E-value=8.1 Score=38.87 Aligned_cols=32 Identities=34% Similarity=0.385 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|+|+|.|+.|+++ +..++..|++|.+.|.+
T Consensus 168 ~~VlViGaGgvG~~a-a~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEA-AKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCEEEEEeCC
Confidence 579999999999987 56667789999999964
No 357
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=57.18 E-value=8.1 Score=39.33 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=59.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|.+. |+.|...|.+|.++|. -......+... ...+.+. ...|+|++..-..+..+
T Consensus 120 ktvGIIGlG~IG~~v-A~~l~a~G~~V~~~d~-----~~~~~~~~~~~---~sl~ell-----~~aDiV~l~~Plt~~g~ 185 (381)
T 3oet_A 120 RTIGIVGVGNVGSRL-QTRLEALGIRTLLCDP-----PRAARGDEGDF---RTLDELV-----QEADVLTFHTPLYKDGP 185 (381)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECH-----HHHHTTCCSCB---CCHHHHH-----HHCSEEEECCCCCCSST
T ss_pred CEEEEEeECHHHHHH-HHHHHHCCCEEEEECC-----ChHHhccCccc---CCHHHHH-----hhCCEEEEcCcCCcccc
Confidence 569999999999975 7777889999999992 11111111110 0111111 14688777532222100
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
..-..++.. +.+... +...|-|--+.|.---..-|...|++.+
T Consensus 186 ------~~T~~li~~-~~l~~m--k~gailIN~aRG~vvde~aL~~aL~~g~ 228 (381)
T 3oet_A 186 ------YKTLHLADE-TLIRRL--KPGAILINACRGPVVDNAALLARLNAGQ 228 (381)
T ss_dssp ------TCCTTSBCH-HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHTTC
T ss_pred ------ccchhhcCH-HHHhcC--CCCcEEEECCCCcccCHHHHHHHHHhCC
Confidence 000012221 334333 2346777777787777777777777644
No 358
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=57.16 E-value=5.3 Score=36.09 Aligned_cols=22 Identities=41% Similarity=0.540 Sum_probs=0.0
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHH
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVL 203 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL 203 (538)
+.+|+|+|.+ ||||.+.+|+. +
T Consensus 1 m~~i~i~G~~GsGKSTl~~~L~~-~ 24 (204)
T 2if2_A 1 MKRIGLTGNIGCGKSTVAQMFRE-L 24 (204)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHH-T
T ss_pred CeEEEEECCCCcCHHHHHHHHHH-C
No 359
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=57.10 E-value=3.3 Score=41.90 Aligned_cols=38 Identities=21% Similarity=0.214 Sum_probs=25.8
Q ss_pred hhhcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 69 VDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 69 ~~~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+.+.+..++|+|+|.|..|.+. +..|+.. ++|.+.|.+
T Consensus 10 ~~~~~~~~~v~IiGaG~iG~~i-a~~L~~~-~~V~V~~R~ 47 (365)
T 2z2v_A 10 HHIEGRHMKVLILGAGNIGRAI-AWDLKDE-FDVYIGDVN 47 (365)
T ss_dssp ------CCEEEEECCSHHHHHH-HHHHTTT-SEEEEEESC
T ss_pred ccccCCCCeEEEEcCCHHHHHH-HHHHHcC-CeEEEEECC
Confidence 4566777889999999999986 4555555 889998854
No 360
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=57.01 E-value=6 Score=39.33 Aligned_cols=89 Identities=8% Similarity=-0.006 Sum_probs=49.4
Q ss_pred ceEEEEeechhhHHHHHH-HHHhCCCcEEE-ecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAK-LALKQGFEVSG-SDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~-~l~~~G~~v~g-~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
-+|.|||.|..|....+. +....+.++.+ .|.+. +-+++ +.+.|+.-......+-+.. ...|+|++..-- .
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~-~~a~~~a~~~g~~~~y~d~~ell~~----~~iDaV~I~tP~-~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDL-TRAREMADRFSVPHAFGSYEEMLAS----DVIDAVYIPLPT-S 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSH-HHHHHHHHHHTCSEEESSHHHHHHC----SSCSEEEECSCG-G
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCH-HHHHHHHHHcCCCeeeCCHHHHhcC----CCCCEEEEeCCC-c
Confidence 469999999999754333 33456778774 56432 22333 3345764333221111111 247888885321 2
Q ss_pred CC-HHHHHHHHCCCCeeeH
Q 009279 153 DN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 153 ~~-~~l~~a~~~gi~vi~~ 170 (538)
.| +...+|.+.|..|+.+
T Consensus 98 ~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 98 QHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp GHHHHHHHHHHTTCEEEEC
T ss_pred hhHHHHHHHHhcCCEEEEe
Confidence 33 4455667888888875
No 361
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=56.99 E-value=7.9 Score=40.78 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=28.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
...|+|||.|.+|+++ |..|+..|.+|.+.|..
T Consensus 12 ~~dVlIVGaGpaGl~~-A~~La~~G~~v~vlE~~ 44 (499)
T 2qa2_A 12 DASVIVVGAGPAGLML-AGELRLGGVDVMVLEQL 44 (499)
T ss_dssp CEEEEEECCSHHHHHH-HHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHH-HHHHHHCCCCEEEEECC
Confidence 3468999999999985 88899999999999854
No 362
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=56.97 E-value=13 Score=32.87 Aligned_cols=28 Identities=43% Similarity=0.417 Sum_probs=23.7
Q ss_pred EEEEeCC--CCchHHHHHHHHHHHHcCCCe
Q 009279 183 LIAVSGS--HGKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 183 vI~VTGT--nGKTTTt~ml~~iL~~~G~~v 210 (538)
+|+++|. .||||.+.+|+.-|...|+.+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~g~~~ 31 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFV 31 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeE
Confidence 6888884 689999999999998888764
No 363
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=56.96 E-value=7.6 Score=40.93 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=28.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+.+|.+|.+.|..
T Consensus 8 ~dVvIVGgG~aGl~a-A~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTL-ASFVAMRGHRVLLLERE 39 (512)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHH-HHHHHhCCCCEEEEccC
Confidence 468999999999876 78889999999999865
No 364
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=56.63 E-value=8.4 Score=39.05 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|+|+|.|+.|+.+ +..++..|.+|.++|.+
T Consensus 169 ~~V~ViG~G~iG~~~-a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNA-ARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCEEEEEeCC
Confidence 569999999999986 56667799999999964
No 365
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=56.63 E-value=7.9 Score=42.92 Aligned_cols=32 Identities=34% Similarity=0.531 Sum_probs=28.0
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.++|+|||.|.+|++| |..|+.+|++|...|.
T Consensus 389 ~~~VvIIGgGpAGl~a-A~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEA-ARVLMESGYTVHLTDT 420 (729)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHTTCEEEEECS
T ss_pred CceEEEECCCHHHHHH-HHHHHHCCCeEEEEeC
Confidence 3579999999999997 7788889999999984
No 366
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=56.54 E-value=25 Score=35.57 Aligned_cols=80 Identities=23% Similarity=0.211 Sum_probs=51.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC-------Ch-----hHHHHHHCCCeEEeCCCCCCc-----CCCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW-------SS-----YMEGLLEAGANLHIGHSVSNI-----QGNDG 137 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~-------~~-----~~~~~~~~Ga~~~~~~~~~~~-----~~~~~ 137 (538)
.++|.|+|.|.+|+-. |..|+..|.+|+..+... ++ ..+.+.+.|+.+..+.....+ ...++
T Consensus 145 ~~~vvViGgG~~g~E~-A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g 223 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLEL-AATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDG 223 (408)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTS
T ss_pred CCeEEEECCCHHHHHH-HHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCC
Confidence 4679999999999985 777888999999876432 11 123466789988665321111 00000
Q ss_pred -CCCCCEEEEcCCCCCCCH
Q 009279 138 -SRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 138 -~~~~d~vvvsp~i~~~~~ 155 (538)
.-.+|.||+.+|..+...
T Consensus 224 ~~i~~D~vi~a~G~~p~~~ 242 (408)
T 2gqw_A 224 TRIAADMVVVGIGVLANDA 242 (408)
T ss_dssp CEEECSEEEECSCEEECCH
T ss_pred CEEEcCEEEECcCCCccHH
Confidence 114789999998876654
No 367
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=56.46 E-value=12 Score=37.13 Aligned_cols=31 Identities=39% Similarity=0.383 Sum_probs=26.0
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
+..+|++.|-| |||||...|+..++..|.++
T Consensus 128 ~g~vi~lvG~nGaGKTTll~~Lag~l~~~~g~V 160 (328)
T 3e70_C 128 KPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSV 160 (328)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 45688888876 69999999999999887664
No 368
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=56.42 E-value=5.2 Score=39.58 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=26.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCC------CcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQG------FEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G------~~v~g~D~ 107 (538)
.|.|||.|.+|.++ |..|+++| .+|.+.|.
T Consensus 2 dVvIIGgGi~Gls~-A~~La~~G~~~~p~~~V~vlE~ 37 (351)
T 3g3e_A 2 RVVVIGAGVIGLST-ALCIHERYHSVLQPLDIKVYAD 37 (351)
T ss_dssp EEEEECCSHHHHHH-HHHHHHHHTTTSSSCEEEEEES
T ss_pred cEEEECCCHHHHHH-HHHHHHhccccCCCceEEEEEC
Confidence 47899999999986 78888888 89999884
No 369
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=56.41 E-value=6.8 Score=39.39 Aligned_cols=31 Identities=23% Similarity=-0.027 Sum_probs=26.6
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+|+|||.|.+|.++ |..|+..|.+|...+..
T Consensus 3 ~v~iiG~G~~Gl~~-A~~l~~~g~~v~v~E~~ 33 (367)
T 1i8t_A 3 DYIIVGSGLFGAVC-ANELKKLNKKVLVIEKR 33 (367)
T ss_dssp EEEEECCSHHHHHH-HHHHGGGTCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHhCCCcEEEEecC
Confidence 47899999999987 77888889999999843
No 370
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=56.33 E-value=8 Score=39.27 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=26.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC--cEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~ 108 (538)
++|.|||.|.+|+++ |..|+..|+ +|...|..
T Consensus 2 k~vvIIGaG~aGl~a-A~~L~~~g~~~~V~lie~~ 35 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQV-AVSLRQAKYPGRIALINDE 35 (404)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCSCEEEECCS
T ss_pred CCEEEEcChHHHHHH-HHHHHhhCcCCCEEEEeCC
Confidence 458899999999997 677788998 88887753
No 371
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=56.09 E-value=8.1 Score=40.48 Aligned_cols=32 Identities=25% Similarity=0.173 Sum_probs=26.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~~ 108 (538)
.+|+|||.|.+|+++ |..|+.+| .+|.+.+..
T Consensus 10 ~~v~iiG~G~~Gl~~-A~~l~~~g~~~v~v~E~~ 42 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGA-AVRLTELGYKNWHLYECN 42 (484)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCSEEEEESS
T ss_pred CCEEEECcCHHHHHH-HHHHHHcCCCCEEEEeCC
Confidence 458899999999987 78888888 799998843
No 372
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=56.06 E-value=8.3 Score=37.89 Aligned_cols=67 Identities=18% Similarity=0.064 Sum_probs=35.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEE-EecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVS-GSDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+|.|||.|..|...++..|...|.++. +.|.+.. ..+. +.+.|+.... .+..++.. ....|+|++..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~-~~~~~~~~~g~~~~~-~~~~~~l~---~~~~D~V~i~t 70 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAE-RGAAYATENGIGKSV-TSVEELVG---DPDVDAVYVST 70 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHH-HHHHHHHHTTCSCCB-SCHHHHHT---CTTCCEEEECS
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHH-HHHHHHHHcCCCccc-CCHHHHhc---CCCCCEEEEeC
Confidence 588999999998752333334788876 5664322 2333 3344653111 11111110 01478888854
No 373
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=56.02 E-value=7.4 Score=39.71 Aligned_cols=32 Identities=28% Similarity=0.147 Sum_probs=27.6
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
.|.|||.|.+|+++ |..|+.+|.+|...|...
T Consensus 6 dViIIGgG~aGl~a-A~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 6 ENIIIGAGAAGLFC-AAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHH-HHHHHhCCCCEEEEeCCC
Confidence 47899999999987 788888999999999543
No 374
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=55.79 E-value=9.6 Score=40.78 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=29.2
Q ss_pred hcCCCceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 71 FKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 71 ~~~~~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
+....-.|+|||.|.+|.++ |..|+.+|.+|...+.
T Consensus 14 m~~~~~DVvVIGgGi~Gl~~-A~~La~~G~~V~LlEk 49 (561)
T 3da1_A 14 MSEKQLDLLVIGGGITGAGI-ALDAQVRGIQTGLVEM 49 (561)
T ss_dssp HTTSCEEEEEECCSHHHHHH-HHHHHTTTCCEEEEES
T ss_pred ccCCCCCEEEECCCHHHHHH-HHHHHhCCCcEEEEEC
Confidence 33333468999999999986 7888999999999884
No 375
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=55.69 E-value=8.8 Score=42.02 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=28.4
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.++|.|||.|.+|+++ |..|+.+|++|.+.+..
T Consensus 107 ~~~v~viG~G~~gl~~-a~~l~~~g~~v~~~e~~ 139 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAA-ARQLQSFGMDVTLLEAR 139 (662)
T ss_dssp CCEEEEECCBHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CCeEEEECcCHHHHHH-HHHHHHCCCeEEEEecC
Confidence 3579999999999987 78888999999998843
No 376
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=55.66 E-value=6.9 Score=39.31 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=26.5
Q ss_pred eEEEEeechhhHHHHHHHHHhC--CCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~ 108 (538)
+|+|||.|.+|+++ |..|+.. |.+|.+.|..
T Consensus 2 dV~IVGaG~aGl~~-A~~L~~~~~G~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVF-ASQLKQARPLWAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHH-HHHHHHHCTTSEEEEECSS
T ss_pred eEEEECCCHHHHHH-HHHHHhcCCCCCEEEEECC
Confidence 58899999999986 7778877 9999999843
No 377
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=55.63 E-value=16 Score=36.04 Aligned_cols=48 Identities=27% Similarity=0.439 Sum_probs=35.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEe
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~ 125 (538)
.+|+|+|.|+.|..+ +.+++..|++|.+.|... +..+.+.+.|+...+
T Consensus 168 ~~VlV~GaG~vG~~a-~qla~~~Ga~Vi~~~~~~-~~~~~~~~lGa~~~i 215 (340)
T 3s2e_A 168 QWVVISGIGGLGHVA-VQYARAMGLRVAAVDIDD-AKLNLARRLGAEVAV 215 (340)
T ss_dssp SEEEEECCSTTHHHH-HHHHHHTTCEEEEEESCH-HHHHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCeEEEEeCCH-HHHHHHHHcCCCEEE
Confidence 458899999999987 566677899999988532 234456677876544
No 378
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=55.57 E-value=9.8 Score=37.13 Aligned_cols=65 Identities=12% Similarity=0.045 Sum_probs=42.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSA 149 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~ 149 (538)
.+|+|+|.|..|+.+ ..+++..|++|.+.+ .. +..+.+.+.|+..++. +...+ ...+|+++-..|
T Consensus 144 ~~VlV~GaG~vG~~a-~qlak~~Ga~Vi~~~-~~-~~~~~~~~lGa~~v~~-d~~~v-----~~g~Dvv~d~~g 208 (315)
T 3goh_A 144 REVLIVGFGAVNNLL-TQMLNNAGYVVDLVS-AS-LSQALAAKRGVRHLYR-EPSQV-----TQKYFAIFDAVN 208 (315)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHTCEEEEEC-SS-CCHHHHHHHTEEEEES-SGGGC-----CSCEEEEECC--
T ss_pred CEEEEECCCHHHHHH-HHHHHHcCCEEEEEE-Ch-hhHHHHHHcCCCEEEc-CHHHh-----CCCccEEEECCC
Confidence 458999999999987 456667899999998 43 3455667789877663 21111 124677665544
No 379
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=55.52 E-value=13 Score=37.51 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=25.1
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
..+|++.|-| |||||...|+..++..+.++
T Consensus 157 g~vi~lvG~nGsGKTTll~~Lag~l~~~~G~V 188 (359)
T 2og2_A 157 PAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKV 188 (359)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEEcCCCChHHHHHHHHHhhccccCCEE
Confidence 4589999877 79999999999998776554
No 380
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=55.40 E-value=8.3 Score=40.57 Aligned_cols=33 Identities=27% Similarity=0.129 Sum_probs=28.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..+|+|||.|.+|+++ |..|+..|.+|...|..
T Consensus 92 ~~dVvIVGgG~aGl~a-A~~La~~G~~V~liEk~ 124 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRA-AVELALLGARVVLVEKR 124 (497)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCEEEEEESC
T ss_pred CCCEEEECccHHHHHH-HHHHHHCCCeEEEEEec
Confidence 3569999999999986 78888899999998843
No 381
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=55.15 E-value=11 Score=36.48 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=26.6
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.++++|+|.|+.|++. |..|+..| +|.+.|.+
T Consensus 128 ~k~vlV~GaGgiG~ai-a~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAV-AFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHH-HHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHH-HHHHHHCC-CEEEEECC
Confidence 4679999999999975 67778899 99998864
No 382
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=55.15 E-value=7.2 Score=35.07 Aligned_cols=24 Identities=33% Similarity=0.443 Sum_probs=20.3
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVL 203 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL 203 (538)
...+|+++|-| ||||+..+|...+
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~ 31 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKAL 31 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHS
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhC
Confidence 34699999987 6999999998875
No 383
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=55.10 E-value=7.1 Score=39.68 Aligned_cols=32 Identities=19% Similarity=0.022 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhC--CCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~ 108 (538)
..|+|||.|.+|.++ |..|+.+ |.+|.+.|..
T Consensus 37 ~dVvIIGaGi~Gls~-A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAAC-AFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHH-HHHHHhcCCCCeEEEEeCC
Confidence 458999999999986 7888888 9999999843
No 384
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=55.05 E-value=9.2 Score=38.92 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=26.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEec
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D 106 (538)
++|.|||+|..|.+. |+.|...|.+|.++|
T Consensus 117 ~tvGIIGlG~IG~~v-A~~l~~~G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRL-VEVLRGLGWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEC
T ss_pred CEEEEEeCCHHHHHH-HHHHHHCCCEEEEEc
Confidence 569999999999985 777788999999999
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=54.79 E-value=9.4 Score=38.50 Aligned_cols=32 Identities=34% Similarity=0.393 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|+|+|.|+.|+.+ +..++..|++|.+.|.+
T Consensus 167 ~~V~ViGaG~iG~~~-a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNA-AKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCEEEEEECC
Confidence 569999999999986 66777899999999964
No 386
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.78 E-value=19 Score=36.06 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=0.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC----------hhHHHHHHCCCeEEeCCCCCCc-----------CC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS----------SYMEGLLEAGANLHIGHSVSNI-----------QG 134 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~----------~~~~~~~~~Ga~~~~~~~~~~~-----------~~ 134 (538)
+++.|+|.|.+|+-. |..|+..|.+|+..+.... ...+.+.+.|+.+..+.....+ .
T Consensus 144 ~~vvViGgG~~g~E~-A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~i- 221 (367)
T 1xhc_A 144 GEAIIIGGGFIGLEL-AGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGFI- 221 (367)
T ss_dssp SEEEEEECSHHHHHH-HHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEEE-
T ss_pred CcEEEECCCHHHHHH-HHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCEE-
Q ss_pred CCCCCCCCEEEEcCCCCCCCHHHHHH
Q 009279 135 NDGSRFPNAVVASSAIPQDNVEILHA 160 (538)
Q Consensus 135 ~~~~~~~d~vvvsp~i~~~~~~l~~a 160 (538)
.+|.|++..|..+....+..+
T Consensus 222 -----~~D~vi~a~G~~p~~~ll~~~ 242 (367)
T 1xhc_A 222 -----EGKVKICAIGIVPNVDLARRS 242 (367)
T ss_dssp -----ECSCEEEECCEEECCHHHHHT
T ss_pred -----EcCEEEECcCCCcCHHHHHhC
No 387
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=54.74 E-value=8.3 Score=40.54 Aligned_cols=30 Identities=23% Similarity=0.161 Sum_probs=26.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|.++ |..|+.+|.+|...|.
T Consensus 5 DVvIIGgGi~G~~~-A~~La~~G~~V~llE~ 34 (501)
T 2qcu_A 5 DLIVIGGGINGAGI-AADAAGRGLSVLMLEA 34 (501)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHH-HHHHHhCCCCEEEEEC
Confidence 48899999999986 8888999999999984
No 388
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=54.73 E-value=11 Score=36.01 Aligned_cols=33 Identities=33% Similarity=0.459 Sum_probs=29.4
Q ss_pred cCCcEEEEeC----CCCchHHHHHHHHHHHHcCCCeE
Q 009279 179 EKYNLIAVSG----SHGKSTTASMLAYVLKAMGDDLT 211 (538)
Q Consensus 179 ~~~~vI~VTG----TnGKTTTt~ml~~iL~~~G~~v~ 211 (538)
..++.|.||| +=||+-|++-+..+|+..|++|.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt 57 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVT 57 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeE
Confidence 3578999998 56999999999999999999975
No 389
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=54.73 E-value=5.5 Score=40.94 Aligned_cols=31 Identities=29% Similarity=0.014 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCC-CcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQG-FEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G-~~v~g~D~ 107 (538)
..|+|||.|.+|.++ |..|+.+| .+|.+.|.
T Consensus 24 ~dVvIIGgGiaGls~-A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAA-AYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHH-HHHHHhCCCCcEEEEcc
Confidence 458899999999986 78888899 99999985
No 390
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=54.58 E-value=8.4 Score=37.72 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=26.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEec
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D 106 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|
T Consensus 15 ~~vvIIG~G~aGl~a-A~~l~~~g~~v~lie 44 (335)
T 2a87_A 15 RDVIVIGSGPAGYTA-ALYAARAQLAPLVFE 44 (335)
T ss_dssp EEEEEECCHHHHHHH-HHHHHHTTCCCEEEC
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCeEEEEe
Confidence 568999999999987 677778899999887
No 391
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=54.56 E-value=6.1 Score=40.83 Aligned_cols=31 Identities=26% Similarity=0.214 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|.++ |..|+..|.+|...|..
T Consensus 8 dVvIVGaG~aGl~a-A~~La~~G~~V~vlE~~ 38 (453)
T 3atr_A 8 DVLIIGGGFAGSSA-AYQLSRRGLKILLVDSK 38 (453)
T ss_dssp SEEEECCSHHHHHH-HHHHSSSSCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEECC
Confidence 48899999999986 88889999999999854
No 392
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=54.21 E-value=7.2 Score=38.25 Aligned_cols=30 Identities=33% Similarity=0.379 Sum_probs=25.0
Q ss_pred eEEEEeechhhHHHHHHHHH--hCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLAL--KQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~--~~G~~v~g~D~ 107 (538)
.|.|||.|.+|++| |..|+ ..|++|...|.
T Consensus 67 DV~IIGaGPAGlsA-A~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 67 DVIIVGAGSSGLSA-AYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp SEEEECCSHHHHHH-HHHHHHHCTTSCEEEECS
T ss_pred CEEEECCCHHHHHH-HHHHHHhCCCCeEEEEEC
Confidence 48899999999998 66665 35999999984
No 393
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=54.19 E-value=8.9 Score=43.39 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=28.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.++|+|||.|.+|+++ |..|+.+|++|.+.+.
T Consensus 278 ~~~v~viG~G~aGl~~-A~~l~~~g~~v~v~E~ 309 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAA-ARQLQSFGMDVTLLEA 309 (852)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHHHH-HHHHHHCCCcEEEEEe
Confidence 3579999999999987 7888899999999984
No 394
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=54.17 E-value=8.4 Score=41.23 Aligned_cols=31 Identities=35% Similarity=0.338 Sum_probs=27.1
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|+++ |..|+.+|.+|.+.+..
T Consensus 128 DVvVVGaG~aGl~a-A~~la~~G~~V~vlEk~ 158 (571)
T 1y0p_A 128 DVVVVGSGGAGFSA-AISATDSGAKVILIEKE 158 (571)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHH-HHHHHHCCCcEEEEeCC
Confidence 58899999999987 77888899999999843
No 395
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=54.14 E-value=14 Score=38.94 Aligned_cols=30 Identities=30% Similarity=0.388 Sum_probs=25.2
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
..+|+|.|-| ||||+...|+.+++..+.++
T Consensus 293 GeVI~LVGpNGSGKTTLl~~LAgll~~~~G~V 324 (503)
T 2yhs_A 293 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSV 324 (503)
T ss_dssp TEEEEEECCTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEECCCcccHHHHHHHHHHHhhhcCCeE
Confidence 4589999987 69999999999998876654
No 396
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=54.05 E-value=33 Score=30.11 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=13.1
Q ss_pred CceEEEEeechhhHHH
Q 009279 75 KGWIHFVGIGGSGLSA 90 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~ 90 (538)
.++|+|+|.|.|+..|
T Consensus 40 a~~I~i~G~G~S~~~A 55 (180)
T 1jeo_A 40 AKKIFIFGVGRSGYIG 55 (180)
T ss_dssp CSSEEEECCHHHHHHH
T ss_pred CCEEEEEeecHHHHHH
Confidence 4579999999998765
No 397
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=54.04 E-value=8.7 Score=40.09 Aligned_cols=31 Identities=29% Similarity=0.304 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
-.|+|||.|.+|+++ |..|+..|.+|...|.
T Consensus 27 ~DVvVIGgG~aGl~a-A~~la~~G~~V~liEk 57 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRA-ARLAGALGKRVAIAEE 57 (484)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CCEEEECcCHHHHHH-HHHHHhCcCEEEEEeC
Confidence 358899999999987 7888889999999985
No 398
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=53.98 E-value=9.1 Score=37.72 Aligned_cols=26 Identities=46% Similarity=0.487 Sum_probs=22.8
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVLKA 205 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL~~ 205 (538)
...+|||.|.| ||||++.+|..+|..
T Consensus 89 ~g~ivgI~G~sGsGKSTL~~~L~gll~~ 116 (312)
T 3aez_A 89 VPFIIGVAGSVAVGKSTTARVLQALLAR 116 (312)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCchHHHHHHHHHhhccc
Confidence 45699999977 799999999999975
No 399
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=53.96 E-value=16 Score=32.22 Aligned_cols=32 Identities=31% Similarity=0.360 Sum_probs=26.6
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCCeE
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDDLT 211 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v~ 211 (538)
...+|.++|- .||||.+..++..|...|.++.
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~ 45 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVE 45 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEE
Confidence 3468999996 6799999999999998887643
No 400
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=53.96 E-value=81 Score=30.75 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=61.0
Q ss_pred eEEEEee-chhhHHHHHHHHHhCC--CcEEEecCCCCh-hHHHHHHCC--CeEEe--C-CCCCC-cCCCCCCCCCCEEEE
Q 009279 77 WIHFVGI-GGSGLSALAKLALKQG--FEVSGSDLVWSS-YMEGLLEAG--ANLHI--G-HSVSN-IQGNDGSRFPNAVVA 146 (538)
Q Consensus 77 ~v~vlG~-G~sG~~~la~~l~~~G--~~v~g~D~~~~~-~~~~~~~~G--a~~~~--~-~~~~~-~~~~~~~~~~d~vvv 146 (538)
||.|+|. |..|.+. +..|+.+| .++...|....+ .+.++.+.. ..+.. + .+... + +.+|+||.
T Consensus 2 KI~IiGa~G~VG~~l-a~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~------~~aDvVvi 74 (314)
T 1mld_A 2 KVAVLGASGGIGQPL-SLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL------KGCDVVVI 74 (314)
T ss_dssp EEEEETTTSTTHHHH-HHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH------TTCSEEEE
T ss_pred EEEEECCCChHHHHH-HHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHh------CCCCEEEE
Confidence 5899998 9999984 66677788 789999976511 111222211 12221 1 12221 2 36899999
Q ss_pred cCCCCCCCH-HHHHHHHCCCCeeeH-HHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 147 SSAIPQDNV-EILHAKSVGVPIYKR-DYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 147 sp~i~~~~~-~l~~a~~~gi~vi~~-~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.-+.|...- ........+++++.. .+.......+. +|.+. ||==.+++.+++..++..
T Consensus 75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a-~viv~-sNPv~~~~~i~~~~~~~~ 134 (314)
T 1mld_A 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDA-MICII-SNPVNSTIPITAEVFKKH 134 (314)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEEC-SSCHHHHHHHHHHHHHHT
T ss_pred CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCe-EEEEE-CCCcchhHHHHHHHHHHc
Confidence 888765321 000000111111111 11122222233 34443 887677777776766554
No 401
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=53.86 E-value=9.3 Score=36.75 Aligned_cols=31 Identities=32% Similarity=0.296 Sum_probs=26.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhC-CCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ-GFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~-G~~v~g~D~ 107 (538)
..|+|||.|.+|+++ |..|+.. |.+|...+.
T Consensus 40 ~dVvIIGgG~aGl~a-A~~la~~~G~~V~viEk 71 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSA-AYEISKNPNVQVAIIEQ 71 (284)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTSTTSCEEEEES
T ss_pred cCEEEECccHHHHHH-HHHHHHcCCCeEEEEEC
Confidence 358899999999987 7777876 999999884
No 402
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=53.86 E-value=48 Score=32.82 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=28.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEe-cC-CCChhHHHHHH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGS-DL-VWSSYMEGLLE 118 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~-D~-~~~~~~~~~~~ 118 (538)
.+|.|+|.|..|+-.+..++...+.++.+. |. ...+++..+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~ 48 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ 48 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhh
Confidence 368999999999988776666677776654 42 23344444443
No 403
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=53.82 E-value=9.2 Score=40.26 Aligned_cols=30 Identities=23% Similarity=0.229 Sum_probs=26.5
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|++| |..|+..|.+|.+.+.
T Consensus 43 DVvVVGaG~AGl~A-A~~aa~~G~~V~vlEk 72 (510)
T 4at0_A 43 DVVVAGYGIAGVAA-SIEAARAGADVLVLER 72 (510)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECS
T ss_pred CEEEECCCHHHHHH-HHHHHHCCCcEEEEeC
Confidence 48899999999987 7888889999999884
No 404
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=53.75 E-value=10 Score=36.47 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=25.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEec
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D 106 (538)
+|+|||.|.+|+++ |..|+..|.+|...+
T Consensus 3 dvvIIG~G~aGl~a-A~~l~~~g~~v~li~ 31 (310)
T 1fl2_A 3 DVLIVGSGPAGAAA-AIYSARKGIRTGLMG 31 (310)
T ss_dssp EEEEECCSHHHHHH-HHHHHTTTCCEEEEC
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCcEEEEe
Confidence 47899999999987 677788999998876
No 405
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=53.68 E-value=10 Score=38.13 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=27.3
Q ss_pred CcEEEEe---CCCCchHHHHHHHHHHH--HcCCCeEEEe
Q 009279 181 YNLIAVS---GSHGKSTTASMLAYVLK--AMGDDLTAIV 214 (538)
Q Consensus 181 ~~vI~VT---GTnGKTTTt~ml~~iL~--~~G~~v~~~~ 214 (538)
.++|.|| |-.||||++.-++..|. +.|++|..+.
T Consensus 17 ~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD 55 (354)
T 2woj_A 17 THKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLIS 55 (354)
T ss_dssp SCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3556665 67899999999999999 8999976543
No 406
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=53.65 E-value=8.7 Score=40.44 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=28.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|+++ |..|+..|.+|.+.|..
T Consensus 12 ~dVlIVGaGpaGl~~-A~~La~~G~~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMML-AGELRLAGVEVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHH-HHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 458999999999985 88899999999999854
No 407
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=53.64 E-value=9.9 Score=39.16 Aligned_cols=105 Identities=18% Similarity=0.157 Sum_probs=59.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
+++.|||+|..|.+. |+.+...|.+|.++|...... ..++.. . ...+++. ...|+|++..- . .+
T Consensus 157 ktvGIIGlG~IG~~v-A~~l~~~G~~V~~yd~~~~~~-----~~~~~~-~-~sl~ell-----~~aDvV~lhvP--l-t~ 220 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQV-GNLAESLGMTVRYYDTSDKLQ-----YGNVKP-A-ASLDELL-----KTSDVVSLHVP--S-SK 220 (416)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECTTCCCC-----BTTBEE-C-SSHHHHH-----HHCSEEEECCC--C---
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEECCcchhc-----ccCcEe-c-CCHHHHH-----hhCCEEEEeCC--C-CH
Confidence 569999999999985 777788999999999542210 011111 1 1111111 14687777532 1 11
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
... .++.. +.+... +...+-|--+.|.---..-+...|+..
T Consensus 221 ~T~-------~li~~-~~l~~m--k~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 221 STS-------KLITE-AKLRKM--KKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp ----------CCBCH-HHHHHS--CTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred HHh-------hhcCH-HHHhhC--CCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 110 12222 333333 234777888888877777777777653
No 408
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=53.58 E-value=12 Score=33.69 Aligned_cols=31 Identities=32% Similarity=0.390 Sum_probs=26.3
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCCe
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v 210 (538)
...+|+|+|. .||||.+.+|+.-|...++++
T Consensus 9 ~~~~I~l~G~~GsGKST~~~~L~~~l~~~~~~~ 41 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEV 41 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred cCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcE
Confidence 3468999995 799999999999998888765
No 409
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=53.43 E-value=9.1 Score=39.53 Aligned_cols=31 Identities=35% Similarity=0.207 Sum_probs=27.1
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|.|||.|.+|+++ |..|+..|.+|...|..
T Consensus 28 dVvIIGgG~aGl~a-A~~la~~G~~V~llEk~ 58 (447)
T 2i0z_A 28 DVIVIGGGPSGLMA-AIGAAEEGANVLLLDKG 58 (447)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECCcHHHHHH-HHHHHHCCCCEEEEECC
Confidence 48899999999987 78888899999999954
No 410
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=53.41 E-value=9 Score=39.68 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
-.|.|||.|.+|+++ |..|+..|.+|...|.
T Consensus 6 ~DVvVIGaG~aGl~a-A~~la~~G~~V~liEk 36 (463)
T 4dna_A 6 YDLFVIGGGSGGVRS-GRLAAALGKKVAIAEE 36 (463)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCEEEEES
T ss_pred CcEEEECcCHHHHHH-HHHHHhCCCEEEEEeC
Confidence 358899999999987 7888889999999985
No 411
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=53.39 E-value=9.2 Score=40.52 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=27.6
Q ss_pred ceEEEEeechhhHHHHHHHHHh---CCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK---QGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~---~G~~v~g~D~~ 108 (538)
.+|+|||.|.+|.++ |..|+. .|.+|.+.|..
T Consensus 6 ~dVvIVGgG~aGl~a-A~~La~~~~~G~~V~liE~~ 40 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMA-ASYLVRALQQQANITLIESA 40 (538)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHCCSSCEEEEEECS
T ss_pred CeEEEECCCHHHHHH-HHHHHhhcCCCCEEEEECCC
Confidence 468999999999986 788888 99999999853
No 412
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=53.24 E-value=14 Score=36.06 Aligned_cols=31 Identities=39% Similarity=0.468 Sum_probs=25.9
Q ss_pred CcEEEEeCC--CCchHHHHHHHHHHHHcCCCeE
Q 009279 181 YNLIAVSGS--HGKSTTASMLAYVLKAMGDDLT 211 (538)
Q Consensus 181 ~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v~ 211 (538)
..+|+++|- .||||++..++..+...|.++.
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~ 130 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVG 130 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEE
Confidence 458888875 4799999999999999888764
No 413
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=53.19 E-value=12 Score=36.40 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=27.1
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|.+.+.+
T Consensus 141 ~~~vlVlGaGg~g~ai-a~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGI-YFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHH-HHHHHHCCCCEEEEEeCC
Confidence 4679999999999986 566677897 99999854
No 414
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=53.12 E-value=8.4 Score=37.05 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=27.2
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.++++|+|.|+.|++. +..|+..|.+|.+.+.+
T Consensus 119 ~~~vlvlGaGg~g~a~-a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGV-LLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTT-HHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHH-HHHHHHCCCEEEEEECC
Confidence 4679999999999986 56667789999999864
No 415
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=53.11 E-value=9.9 Score=40.09 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=41.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
++|.|+|+|..|+++ |+.|+..|.+|.++|..... ..++...|+.+. ..+++. +..|+|+...
T Consensus 278 ktVgIIG~G~IG~~v-A~~l~~~G~~V~v~d~~~~~-~~~a~~~G~~~~---~l~ell-----~~aDiVi~~~ 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGC-AQSLRGLGATVWVTEIDPIC-ALQAAMEGYRVV---TMEYAA-----DKADIFVTAT 340 (494)
T ss_dssp CEEEEECCSHHHHHH-HHHHHTTTCEEEEECSCHHH-HHHHHTTTCEEC---CHHHHT-----TTCSEEEECS
T ss_pred CEEEEEccCHHHHHH-HHHHHHCCCEEEEEeCChHh-HHHHHHcCCEeC---CHHHHH-----hcCCEEEECC
Confidence 679999999999986 77778899999999954322 113344576542 111111 2578888764
No 416
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=53.04 E-value=16 Score=35.97 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=26.6
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVW 109 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~ 109 (538)
.++|.|+|.|..|.+. |..|+.+|. ++.+.|.+.
T Consensus 6 ~~kI~IIGaG~vG~sl-a~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASY-VFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHH-HHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHH-HHHHHhCCCCCEEEEEeCCc
Confidence 4679999999999985 566666664 799999763
No 417
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=52.99 E-value=9.4 Score=37.44 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=31.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC-CChhHHHHHHCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV-WSSYMEGLLEAGA 121 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~-~~~~~~~~~~~Ga 121 (538)
+|.|||.|..|.+ +|..|+..|++|.++|.. ..+..+.+.+.|.
T Consensus 2 ~I~iiG~G~mG~~-~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~ 46 (335)
T 1txg_A 2 IVSILGAGAMGSA-LSVPLVDNGNEVRIWGTEFDTEILKSISAGRE 46 (335)
T ss_dssp EEEEESCCHHHHH-HHHHHHHHCCEEEEECCGGGHHHHHHHHTTCC
T ss_pred EEEEECcCHHHHH-HHHHHHhCCCeEEEEEccCCHHHHHHHHHhCc
Confidence 5899999999986 577777889999999851 1233455556564
No 418
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=52.80 E-value=19 Score=35.53 Aligned_cols=50 Identities=24% Similarity=0.302 Sum_probs=35.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~ 126 (538)
.+|+|+|.|+.|..++..+.+..|.+|.+.|.... ..+.+.+.|+...+.
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~-r~~~~~~~Ga~~~i~ 214 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQD-KLNLAKKIGADVTIN 214 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHH-HHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHH-HhhhhhhcCCeEEEe
Confidence 35899999999987755554556899999985432 244566778776553
No 419
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=52.74 E-value=1.2e+02 Score=29.76 Aligned_cols=71 Identities=23% Similarity=0.218 Sum_probs=41.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCChh---HHHHHH-----CCCeEEeCCCCCCcCCCCCCCCCCEE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSSY---MEGLLE-----AGANLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~~---~~~~~~-----~Ga~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
+.||.|+|.|..|.+. +..|+.+|. ++...|.+...- +.++.. ..+.+.. ...+.+. .+|+|
T Consensus 9 ~~KI~IiGaG~vG~~l-a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~~~a~~------~aDvV 80 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSY-AYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-AEYSDAK------DADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-CCGGGGG------GCSEE
T ss_pred CCEEEEECCCHHHHHH-HHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-CCHHHhC------CCCEE
Confidence 4679999999999985 566666664 788889743211 112221 1222222 2223332 68999
Q ss_pred EEcCCCCCC
Q 009279 145 VASSAIPQD 153 (538)
Q Consensus 145 vvsp~i~~~ 153 (538)
|+.-++|..
T Consensus 81 ii~ag~~~k 89 (326)
T 2zqz_A 81 VITAGAPQK 89 (326)
T ss_dssp EECCCCC--
T ss_pred EEcCCCCCC
Confidence 998887654
No 420
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=52.74 E-value=18 Score=35.35 Aligned_cols=70 Identities=19% Similarity=0.161 Sum_probs=42.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh---hHHHHHH----CC--CeEEeCCCCCCcCCCCCCCCCCEEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS---YMEGLLE----AG--ANLHIGHSVSNIQGNDGSRFPNAVV 145 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~---~~~~~~~----~G--a~~~~~~~~~~~~~~~~~~~~d~vv 145 (538)
||.|+|.|..|.+ +|..|..+|. ++...|.+... .+.++.. .+ ..+.-+.+.+.+ +..|+||
T Consensus 2 KV~IiGaG~VG~~-~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~------~~aDvVv 74 (294)
T 2x0j_A 2 KLGFVGAGRVGST-SAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL------KGSEIIV 74 (294)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGG------TTCSEEE
T ss_pred EEEEECcCHHHHH-HHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHh------CCCCEEE
Confidence 5899999999987 4777766663 68888975321 1112221 11 222222334443 3689999
Q ss_pred EcCCCCCC
Q 009279 146 ASSAIPQD 153 (538)
Q Consensus 146 vsp~i~~~ 153 (538)
+.-|+|+.
T Consensus 75 itAG~prk 82 (294)
T 2x0j_A 75 VTAGLARK 82 (294)
T ss_dssp ECCCCCCC
T ss_pred EecCCCCC
Confidence 99888753
No 421
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=52.45 E-value=9.9 Score=40.48 Aligned_cols=31 Identities=13% Similarity=0.016 Sum_probs=27.6
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|+++ |..|+..|.+|.+.|..
T Consensus 28 dVlIVGaGpaGl~~-A~~La~~G~~V~vlEr~ 58 (549)
T 2r0c_A 28 DVLILGGGPVGMAL-ALDLAHRQVGHLVVEQT 58 (549)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEeCC
Confidence 58999999999985 88889999999999864
No 422
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=52.41 E-value=16 Score=35.88 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=27.1
Q ss_pred CCceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 74 RKGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
+.++|.|||.|..|.+.+..++...|. +|.++|.+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~ 169 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT 169 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 456799999999999876555555575 89999854
No 423
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=52.21 E-value=14 Score=31.69 Aligned_cols=40 Identities=25% Similarity=0.290 Sum_probs=27.4
Q ss_pred hhhhhhcCCCceEEEEee----chhhHHHHHHHHHhCCCcEEEec
Q 009279 66 ECIVDFKNRKGWIHFVGI----GGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 66 ~~~~~~~~~~~~v~vlG~----G~sG~~~la~~l~~~G~~v~g~D 106 (538)
..+..+..+.++|.|||. |.-|... +..|...|++|...+
T Consensus 13 ~~l~~ll~~p~~iaVVGas~~~g~~G~~~-~~~l~~~G~~v~~Vn 56 (144)
T 2d59_A 13 EDIREILTRYKKIALVGASPKPERDANIV-MKYLLEHGYDVYPVN 56 (144)
T ss_dssp HHHHHHHHHCCEEEEETCCSCTTSHHHHH-HHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCCEEEEEccCCCCCchHHHH-HHHHHHCCCEEEEEC
Confidence 344455544577999999 4667654 566778999876665
No 424
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=51.96 E-value=11 Score=39.29 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=26.7
Q ss_pred ceEEEEeechhhHHHHHHHHHh---CCCc---EEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK---QGFE---VSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~---~G~~---v~g~D~~ 108 (538)
++|+|||.|.+|+++ |..|+. .|.+ |...|..
T Consensus 3 ~~V~IIGaG~aGl~a-A~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQ-LRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHHHHTTCCCCEEEEECSS
T ss_pred CcEEEECccHHHHHH-HHHHHhhhhcCCCCCcEEEEEcC
Confidence 468999999999987 666777 8999 9999843
No 425
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=51.94 E-value=29 Score=31.75 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=40.8
Q ss_pred ceEEEEee-chhhHHHHHHHHHhCCC--cEEEecCCCChhHHHHHHCCCeEEeCC--CCCCcCCCCCCCCCCEEEEcCCC
Q 009279 76 GWIHFVGI-GGSGLSALAKLALKQGF--EVSGSDLVWSSYMEGLLEAGANLHIGH--SVSNIQGNDGSRFPNAVVASSAI 150 (538)
Q Consensus 76 ~~v~vlG~-G~sG~~~la~~l~~~G~--~v~g~D~~~~~~~~~~~~~Ga~~~~~~--~~~~~~~~~~~~~~d~vvvsp~i 150 (538)
++|+|.|. |+.|.+. ++.|+.+|+ +|.+.+.+.... ..+...++.++.++ +.+.+.. ..+.+|.||-..++
T Consensus 19 ~~vlVtGasg~iG~~l-~~~L~~~G~~~~V~~~~r~~~~~-~~~~~~~~~~~~~D~~d~~~~~~--~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 19 KSVFILGASGETGRVL-LKEILEQGLFSKVTLIGRRKLTF-DEEAYKNVNQEVVDFEKLDDYAS--AFQGHDVGFCCLGT 94 (242)
T ss_dssp CEEEEECTTSHHHHHH-HHHHHHHTCCSEEEEEESSCCCC-CSGGGGGCEEEECCGGGGGGGGG--GGSSCSEEEECCCC
T ss_pred CeEEEECCCcHHHHHH-HHHHHcCCCCCEEEEEEcCCCCc-cccccCCceEEecCcCCHHHHHH--HhcCCCEEEECCCc
Confidence 56889995 7888875 666677899 999988654321 11112245444332 1111110 11257888887775
Q ss_pred C
Q 009279 151 P 151 (538)
Q Consensus 151 ~ 151 (538)
.
T Consensus 95 ~ 95 (242)
T 2bka_A 95 T 95 (242)
T ss_dssp C
T ss_pred c
Confidence 3
No 426
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=51.91 E-value=8.8 Score=37.58 Aligned_cols=26 Identities=42% Similarity=0.526 Sum_probs=21.9
Q ss_pred cCCcEEEEeCCC--CchHHHHHHHHHHH
Q 009279 179 EKYNLIAVSGSH--GKSTTASMLAYVLK 204 (538)
Q Consensus 179 ~~~~vI~VTGTn--GKTTTt~ml~~iL~ 204 (538)
....+|||+|-| ||||++.+|..++.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 345699999976 59999999999885
No 427
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=51.89 E-value=11 Score=40.83 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=27.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|.++ |..|+..|.+|...|..
T Consensus 24 ~DVvIVGgG~AGl~a-A~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVA-GLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CCEEEECcCHHHHHH-HHHHHcCCCCEEEEcCC
Confidence 468999999999986 78888899999999854
No 428
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=51.80 E-value=23 Score=31.77 Aligned_cols=31 Identities=39% Similarity=0.351 Sum_probs=25.8
Q ss_pred cCCcEEEEeCC--CCchHHHHHHHHHHHHcCCC
Q 009279 179 EKYNLIAVSGS--HGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 179 ~~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~ 209 (538)
....+|+|+|- .||||+..+|+..|...|..
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~~La~~l~~~G~~ 55 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKL 55 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCce
Confidence 34679999997 57999999999999877754
No 429
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=51.80 E-value=8.1 Score=39.15 Aligned_cols=32 Identities=16% Similarity=-0.012 Sum_probs=26.7
Q ss_pred ceEEEEeechhhHHHHHHHHHh---CCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK---QGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~---~G~~v~g~D~~ 108 (538)
++|+|||.|.+|+++ |..|+. .|.+|...|..
T Consensus 2 ~~VvIIGgG~aGl~a-A~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 2 TKVLVLGGRFGALTA-AYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp CEEEEECSSHHHHHH-HHHHHHHHGGGSEEEEEESS
T ss_pred CeEEEECCCHHHHHH-HHHHHhhCCCCCeEEEEeCC
Confidence 358899999999987 666777 89999998854
No 430
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=51.73 E-value=11 Score=38.92 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|..|+++ |..|+..|.+|...|..
T Consensus 5 ~dvvIIGgG~aGl~a-A~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAA-ALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCEEEEEeCC
Confidence 468899999999987 67778899999999854
No 431
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=51.33 E-value=18 Score=35.74 Aligned_cols=48 Identities=25% Similarity=0.133 Sum_probs=34.0
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhHHHHHHCCCeEEe
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYMEGLLEAGANLHI 125 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~~~~~~~Ga~~~~ 125 (538)
.+|+|+|.|+.|..+ +.+++..|+ +|.+.|.+. +..+.+.+.|+...+
T Consensus 169 ~~VlV~GaG~vG~~~-~q~a~~~Ga~~Vi~~~~~~-~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 169 KSVLITGAGPLGLLG-IAVAKASGAYPVIVSEPSD-FRRELAKKVGADYVI 217 (348)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCSEEEECSCH-HHHHHHHHHTCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHcCCCEEEEECCCH-HHHHHHHHhCCCEEE
Confidence 358999999999987 466677899 999988542 233445566775443
No 432
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=51.28 E-value=15 Score=36.44 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=28.5
Q ss_pred cCCcEEEEeCCC--CchHHHHHHHHHHHHcCCCeEE
Q 009279 179 EKYNLIAVSGSH--GKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 179 ~~~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v~~ 212 (538)
.+.++|+++|.+ ||||+...+...+...|.++..
T Consensus 54 ~~~~~i~i~G~~g~GKSTl~~~l~~~~~~~~~~v~v 89 (341)
T 2p67_A 54 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAV 89 (341)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 356799999976 7999999999999988887643
No 433
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=51.16 E-value=8.5 Score=34.80 Aligned_cols=20 Identities=25% Similarity=0.552 Sum_probs=0.0
Q ss_pred CcEEEEeCCC--CchHHHHHHH
Q 009279 181 YNLIAVSGSH--GKSTTASMLA 200 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~ 200 (538)
..+|++||.+ ||||++.+++
T Consensus 2 ~~~i~l~G~~GsGKST~~~~La 23 (206)
T 1jjv_A 2 TYIVGLTGGIGSGKTTIANLFT 23 (206)
T ss_dssp CEEEEEECSTTSCHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHH
No 434
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=51.12 E-value=11 Score=38.48 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=27.0
Q ss_pred ceEEEEeechhhHHHHHHHHHh--CCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALK--QGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~--~G~~v~g~D~~ 108 (538)
++|+|||.|.+|+++ |..|+. +|.+|+..|..
T Consensus 3 ~~vvIIGgG~aGl~a-A~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 3 KHVVVIGGGVGGIAT-AYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHH-HHHHHHHCTTCEEEEECSS
T ss_pred CCEEEECccHHHHHH-HHHHHcCCCCCeEEEECCC
Confidence 468899999999987 677777 79999999864
No 435
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=51.09 E-value=5.4 Score=37.03 Aligned_cols=30 Identities=33% Similarity=0.454 Sum_probs=24.0
Q ss_pred EEEe--CCCCchHHHHHHHHHHHHcCCCeEEE
Q 009279 184 IAVS--GSHGKSTTASMLAYVLKAMGDDLTAI 213 (538)
Q Consensus 184 I~VT--GTnGKTTTt~ml~~iL~~~G~~v~~~ 213 (538)
|+|+ |-.||||++.-++..|.+.|++|..+
T Consensus 3 I~vs~kGGvGKTt~a~~LA~~la~~g~~Vlli 34 (254)
T 3kjh_A 3 LAVAGKGGVGKTTVAAGLIKIMASDYDKIYAV 34 (254)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 4555 45679999999999999999987543
No 436
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=51.08 E-value=35 Score=33.33 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=42.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChh---HHHHHH------CCCeEEeCCCCCCcCCCCCCCCCCEEEE
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSY---MEGLLE------AGANLHIGHSVSNIQGNDGSRFPNAVVA 146 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~---~~~~~~------~Ga~~~~~~~~~~~~~~~~~~~~d~vvv 146 (538)
||.|+|.|..|.+. +..++.+|. ++...|.+...- +.++.. ....+....+...+ +.+|+||.
T Consensus 1 KI~IiGaG~vG~~~-a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~------~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGAGKVGMAT-AVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDM------RGSDIVLV 73 (308)
T ss_dssp CEEEECCSHHHHHH-HHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG------TTCSEEEE
T ss_pred CEEEECcCHHHHHH-HHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHh------CCCCEEEE
Confidence 47899999999985 566666676 688999765311 112211 23444432233333 36899999
Q ss_pred cCCCCC
Q 009279 147 SSAIPQ 152 (538)
Q Consensus 147 sp~i~~ 152 (538)
.-+.|.
T Consensus 74 ~ag~~~ 79 (308)
T 2d4a_B 74 TAGIGR 79 (308)
T ss_dssp CCSCCC
T ss_pred eCCCCC
Confidence 877665
No 437
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=51.05 E-value=9.1 Score=40.19 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=41.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
++|.|+|+|..|.++ |+.++..|.+|.++|..... ..++.+.|+.+. ....+. +..|+|+..+
T Consensus 258 ktVgIIG~G~IG~~v-A~~l~~~G~~Viv~d~~~~~-~~~a~~~g~~~~---~l~ell-----~~aDiVi~~~ 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGC-ASSMKGLGARVYITEIDPIC-AIQAVMEGFNVV---TLDEIV-----DKGDFFITCT 320 (479)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHHTCEEEEECSCHHH-HHHHHTTTCEEC---CHHHHT-----TTCSEEEECC
T ss_pred CEEEEEeeCHHHHHH-HHHHHhCcCEEEEEeCChhh-HHHHHHcCCEec---CHHHHH-----hcCCEEEECC
Confidence 679999999999986 67777789999999954211 123445676542 111111 2579888874
No 438
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=51.05 E-value=8.6 Score=39.91 Aligned_cols=32 Identities=19% Similarity=0.047 Sum_probs=26.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhC--CCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQ--GFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~--G~~v~g~D~~ 108 (538)
++|+|||.|.+|+++ |..|+.+ |.+|...|..
T Consensus 4 ~~VvIIGaG~aGl~a-A~~L~~~~~g~~Vtvie~~ 37 (472)
T 3iwa_A 4 KHVVVIGAVALGPKA-ACRFKRLDPEAHVTMIDQA 37 (472)
T ss_dssp CEEEEECCSSHHHHH-HHHHHHHCTTSEEEEECCC
T ss_pred CcEEEECCCHHHHHH-HHHHHhhCcCCCEEEEECC
Confidence 468999999999998 5666666 9999999854
No 439
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=50.87 E-value=12 Score=38.50 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
+++.|||+|..|... |+.+...|.+|.++|..
T Consensus 146 ktlGiIGlG~IG~~v-A~~l~~~G~~V~~~d~~ 177 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQL-GILAESLGMYVYFYDIE 177 (404)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CEEEEEeECHHHHHH-HHHHHHCCCEEEEEcCC
Confidence 469999999999975 77778899999999954
No 440
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=50.75 E-value=21 Score=35.24 Aligned_cols=46 Identities=28% Similarity=0.383 Sum_probs=33.5
Q ss_pred ceEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeE
Q 009279 76 GWIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANL 123 (538)
Q Consensus 76 ~~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~ 123 (538)
.+|+|+|. |+.|+.+ +.+++..|++|.+.|.+.. ..+.+.+.|+..
T Consensus 171 ~~vlV~Ga~ggiG~~~-~~~a~~~Ga~V~~~~~~~~-~~~~~~~~g~~~ 217 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLA-VQYAKAMGYRVLGIDGGEG-KEELFRSIGGEV 217 (347)
T ss_dssp CEEEEETTTSHHHHHH-HHHHHHTTCEEEEEECSTT-HHHHHHHTTCCE
T ss_pred CEEEEECCCchHHHHH-HHHHHHCCCcEEEEcCCHH-HHHHHHHcCCce
Confidence 46899999 7899976 5666779999999886543 234556667654
No 441
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=50.69 E-value=25 Score=34.62 Aligned_cols=47 Identities=34% Similarity=0.474 Sum_probs=33.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|+.|+.+ +.+++..|++|.+.|.+. +..+.+.+.|+...
T Consensus 166 ~~VlV~GaG~vG~~~-~~~a~~~Ga~Vi~~~~~~-~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVA-VQYAKAMGLNVVAVDIGD-EKLELAKELGADLV 212 (339)
T ss_dssp CEEEEECCSTTHHHH-HHHHHHTTCEEEEECSCH-HHHHHHHHTTCSEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHcCCEEEEEeCCH-HHHHHHHHCCCCEE
Confidence 469999999999987 466677899999988532 23345566777543
No 442
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=50.66 E-value=10 Score=34.08 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=19.3
Q ss_pred cEEEEeCC--CCchHHHHHHHHHH
Q 009279 182 NLIAVSGS--HGKSTTASMLAYVL 203 (538)
Q Consensus 182 ~vI~VTGT--nGKTTTt~ml~~iL 203 (538)
++|+|||. .||||++.+|+..|
T Consensus 3 ~~i~i~G~~GsGKst~~~~la~~l 26 (208)
T 3ake_A 3 GIVTIDGPSASGKSSVARRVAAAL 26 (208)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHhc
Confidence 48999996 58999999998877
No 443
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=50.38 E-value=9.9 Score=39.71 Aligned_cols=32 Identities=22% Similarity=0.194 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
..|+|||.|.+|++| |..|+..|.+|...|..
T Consensus 26 ~dVvVIGgG~aGl~a-A~~la~~G~~V~liEk~ 57 (491)
T 3urh_A 26 YDLIVIGSGPGGYVC-AIKAAQLGMKVAVVEKR 57 (491)
T ss_dssp CCEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCeEEEEecC
Confidence 348899999999987 77788899999999853
No 444
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=50.27 E-value=13 Score=35.58 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=31.8
Q ss_pred ceEEEEeec-hhhHHHHHHHHHhCCCcEEEecCCCC---hhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIG-GSGLSALAKLALKQGFEVSGSDLVWS---SYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G-~sG~~~la~~l~~~G~~v~g~D~~~~---~~~~~~~~~Ga~~~ 124 (538)
|.++|-|.+ +.|++ +|+.|+..|++|..+|.+.+ +..+++.+.|..+.
T Consensus 10 KvalVTGas~GIG~a-ia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~ 61 (255)
T 4g81_D 10 KTALVTGSARGLGFA-YAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAH 61 (255)
T ss_dssp CEEEETTCSSHHHHH-HHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEeCCCcHHHHH-HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEE
Confidence 445555554 56665 58888999999999997643 23345556665553
No 445
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=50.27 E-value=9.1 Score=40.91 Aligned_cols=32 Identities=31% Similarity=0.334 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
-.|+|||.|.+|+++ |..|+..|.+|.+.+..
T Consensus 122 ~DVvVVG~G~aGl~a-A~~la~~G~~V~vlEk~ 153 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNA-SLAAKKAGANVILVDKA 153 (566)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHHTCCEEEECSS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCcEEEEeCC
Confidence 358999999999987 77788899999999843
No 446
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=50.26 E-value=11 Score=33.72 Aligned_cols=22 Identities=27% Similarity=0.362 Sum_probs=19.6
Q ss_pred EEEEeCCCC--chHHHHHHHHHHH
Q 009279 183 LIAVSGSHG--KSTTASMLAYVLK 204 (538)
Q Consensus 183 vI~VTGTnG--KTTTt~ml~~iL~ 204 (538)
.++++|-|| |||+..+|...+.
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l~ 25 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERLG 25 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 589999987 9999999999884
No 447
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=50.14 E-value=1.3e+02 Score=29.25 Aligned_cols=70 Identities=26% Similarity=0.214 Sum_probs=41.0
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC--cEEEecCCCCh---hHHHHHH-----CCCeEEeCCCCCCcCCCCCCCCCCEE
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF--EVSGSDLVWSS---YMEGLLE-----AGANLHIGHSVSNIQGNDGSRFPNAV 144 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~--~v~g~D~~~~~---~~~~~~~-----~Ga~~~~~~~~~~~~~~~~~~~~d~v 144 (538)
+.||.|+|.|..|.+. +..|+.+|. ++...|.+... .+.++.. ..+.+.. ...+.+ +.+|+|
T Consensus 5 ~~KI~IiGaG~vG~~~-a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~~~~a~------~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSY-AFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-GEYSDC------KDADLV 76 (318)
T ss_dssp BCEEEEECCSHHHHHH-HHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-CCGGGG------TTCSEE
T ss_pred CCEEEEECCCHHHHHH-HHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-CCHHHh------CCCCEE
Confidence 3579999999999985 556665665 78889974321 1112221 1222322 222333 368999
Q ss_pred EEcCCCCC
Q 009279 145 VASSAIPQ 152 (538)
Q Consensus 145 vvsp~i~~ 152 (538)
|+.-+.|.
T Consensus 77 ii~ag~~~ 84 (318)
T 1ez4_A 77 VITAGAPQ 84 (318)
T ss_dssp EECCCC--
T ss_pred EECCCCCC
Confidence 99887764
No 448
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=50.12 E-value=23 Score=35.21 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=22.3
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEE-EecC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVS-GSDL 107 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~-g~D~ 107 (538)
+-+|.|||.|..|..-+..+....+.++. +.|.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~ 39 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR 39 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 35689999999998654444444566665 5564
No 449
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=50.09 E-value=13 Score=36.77 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=26.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|...+.+
T Consensus 154 gk~~lVlGaGG~g~ai-a~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAI-CIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHH-HHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHH-HHHHHHCCCCEEEEEECC
Confidence 4679999999999986 566677998 89888765
No 450
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=49.94 E-value=85 Score=31.13 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=48.0
Q ss_pred eEEEEeechhhHHHHHHHHHh--CCCcEEE-ecCCCChhHHHHHHC---------------------CCeEEe--CCCCC
Q 009279 77 WIHFVGIGGSGLSALAKLALK--QGFEVSG-SDLVWSSYMEGLLEA---------------------GANLHI--GHSVS 130 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~--~G~~v~g-~D~~~~~~~~~~~~~---------------------Ga~~~~--~~~~~ 130 (538)
+|.|+|.|..|+..+..++.. ...++.+ .|....+++..+.+. |-.+.+ ..++.
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 83 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNPL 83 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCGG
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCChH
Confidence 689999999999876555443 2344433 454333444444321 111111 11222
Q ss_pred CcCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHCCCC--eee
Q 009279 131 NIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVP--IYK 169 (538)
Q Consensus 131 ~~~~~~~~~~~d~vvvsp~i~~~~~~l~~a~~~gi~--vi~ 169 (538)
++.+ .....|+|+-+.|.-.+.+......+.|.. |++
T Consensus 84 ~l~w--~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId 122 (339)
T 3b1j_A 84 NLPW--KEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLIT 122 (339)
T ss_dssp GSCT--TTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEES
T ss_pred HCcc--cccCCCEEEECCCccccHHHHHHHHHcCCcEEEEe
Confidence 2221 112579999988766555555455555666 554
No 451
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=49.87 E-value=16 Score=36.39 Aligned_cols=48 Identities=21% Similarity=0.079 Sum_probs=34.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC--hhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS--SYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~--~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|+.|..+ +.+++..|++|.+.|.... +..+.+.+.|+..+
T Consensus 182 ~~VlV~GaG~vG~~~-~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLF-TLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp CEEEEESCHHHHHHH-HHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 469999999999987 4566678999999986541 23445556687654
No 452
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=49.72 E-value=12 Score=38.69 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=27.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|..
T Consensus 3 ~dvvIIGgG~aGl~a-A~~l~~~g~~V~lie~~ 34 (468)
T 2qae_A 3 YDVVVIGGGPGGYVA-SIKAAQLGMKTACVEKR 34 (468)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCeEEEEeCC
Confidence 358899999999987 67778899999999854
No 453
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=49.67 E-value=11 Score=34.52 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=18.9
Q ss_pred cEEEEeCCC--CchHHHHHHHHHH
Q 009279 182 NLIAVSGSH--GKSTTASMLAYVL 203 (538)
Q Consensus 182 ~vI~VTGTn--GKTTTt~ml~~iL 203 (538)
.+|+|+|.+ ||||.+.+|+..|
T Consensus 6 ~~i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 6 PVITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 589999975 5999999998876
No 454
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=49.67 E-value=17 Score=37.60 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=27.4
Q ss_pred CcEEEEeC--CCCchHHHHHHHHHHHHc-CCCeEEE
Q 009279 181 YNLIAVSG--SHGKSTTASMLAYVLKAM-GDDLTAI 213 (538)
Q Consensus 181 ~~vI~VTG--TnGKTTTt~ml~~iL~~~-G~~v~~~ 213 (538)
.++|.|+| -.|||||+.-|+..|... |++|..+
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllv 135 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVV 135 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 45788876 458999999999999998 9997654
No 455
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=49.49 E-value=20 Score=35.89 Aligned_cols=48 Identities=33% Similarity=0.328 Sum_probs=34.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHH-HCCCeEEe
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLL-EAGANLHI 125 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~-~~Ga~~~~ 125 (538)
.+|+|+|.|+.|..+ +.+++..|++|.+.|.... ..+.+. +.|+...+
T Consensus 189 ~~VlV~GaG~vG~~~-~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVA-VKFAKAFGSKVTVISTSPS-KKEEALKNFGADSFL 237 (366)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCGG-GHHHHHHTSCCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCEEEEEeCCHH-HHHHHHHhcCCceEE
Confidence 468999999999987 4666779999999885432 234444 66876544
No 456
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=49.49 E-value=12 Score=33.66 Aligned_cols=24 Identities=29% Similarity=0.232 Sum_probs=20.7
Q ss_pred CCcEEEEeCCC--CchHHHHHHHHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLAYVL 203 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~~iL 203 (538)
...+|+|+|-| ||||++.+|+..+
T Consensus 28 ~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 28 PTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 45799999976 5999999999887
No 457
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=49.14 E-value=19 Score=35.87 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=62.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEc-CCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVAS-SAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvs-p~i~~~~ 154 (538)
+++.|+|.|..|+.. |+.+..-|.+|.++|....+ ...+.|+... . .+++. +..|+|++. |.-+.+.
T Consensus 142 ~tvGIiG~G~IG~~v-a~~~~~fg~~v~~~d~~~~~---~~~~~~~~~~-~--l~ell-----~~sDivslh~Plt~~T~ 209 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRV-AMYGLAFGMKVLCYDVVKRE---DLKEKGCVYT-S--LDELL-----KESDVISLHVPYTKETH 209 (334)
T ss_dssp SEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSCCH---HHHHTTCEEC-C--HHHHH-----HHCSEEEECCCCCTTTT
T ss_pred cEEEEECcchHHHHH-HHhhcccCceeeecCCccch---hhhhcCceec-C--HHHHH-----hhCCEEEEcCCCChhhc
Confidence 569999999999975 78888899999999954332 3345565431 1 11111 146777764 2222221
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHH
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKA 205 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~ 205 (538)
.++.. +.+... +...+-|-=+.|.---..-|...|+.
T Consensus 210 -----------~li~~-~~l~~m--k~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 210 -----------HMINE-ERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp -----------TCBCH-HHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred -----------cCcCH-HHHhhc--CCCeEEEecCccccccHHHHHHHHHh
Confidence 22332 334333 23477777778887766767777764
No 458
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=49.04 E-value=23 Score=35.22 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=35.6
Q ss_pred ceEEEEeechhhHHHHHHHH-HhCCCc-EEEecCCCC--hhHHHHHHCCCeEE
Q 009279 76 GWIHFVGIGGSGLSALAKLA-LKQGFE-VSGSDLVWS--SYMEGLLEAGANLH 124 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l-~~~G~~-v~g~D~~~~--~~~~~~~~~Ga~~~ 124 (538)
.+|+|+|.|+.|+.+++.++ +..|++ |.+.|.... ...+.+.+.|+..+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 46999999999997624556 678998 999986543 13455677888654
No 459
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=49.04 E-value=11 Score=38.09 Aligned_cols=110 Identities=15% Similarity=0.118 Sum_probs=62.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCc-EEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFE-VSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDN 154 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~-v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~ 154 (538)
++|.|||+|..|++. |+.|...|.+ |.++|..... .+.+.+.|+... .....+. ...|+|+......+..
T Consensus 165 ~tvgIIG~G~IG~~v-A~~l~~~G~~~V~~~d~~~~~-~~~~~~~g~~~~--~~l~ell-----~~aDvV~l~~P~t~~t 235 (364)
T 2j6i_A 165 KTIATIGAGRIGYRV-LERLVPFNPKELLYYDYQALP-KDAEEKVGARRV--ENIEELV-----AQADIVTVNAPLHAGT 235 (364)
T ss_dssp CEEEEECCSHHHHHH-HHHHGGGCCSEEEEECSSCCC-HHHHHHTTEEEC--SSHHHHH-----HTCSEEEECCCCSTTT
T ss_pred CEEEEECcCHHHHHH-HHHHHhCCCcEEEEECCCccc-hhHHHhcCcEec--CCHHHHH-----hcCCEEEECCCCChHH
Confidence 569999999999975 7777788997 9999965322 233456676532 1111211 1478888753211111
Q ss_pred HHHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHcC
Q 009279 155 VEILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAMG 207 (538)
Q Consensus 155 ~~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~G 207 (538)
. .++.+ +.+... ++ ..+-|--+.|.--...-|...|+..+
T Consensus 236 ~----------~li~~-~~l~~m-k~-ga~lIn~arG~~vd~~aL~~aL~~g~ 275 (364)
T 2j6i_A 236 K----------GLINK-ELLSKF-KK-GAWLVNTARGAICVAEDVAAALESGQ 275 (364)
T ss_dssp T----------TCBCH-HHHTTS-CT-TEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred H----------HHhCH-HHHhhC-CC-CCEEEECCCCchhCHHHHHHHHHcCC
Confidence 0 12221 223222 22 34445545577766676777787654
No 460
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=48.71 E-value=10 Score=37.61 Aligned_cols=92 Identities=23% Similarity=0.147 Sum_probs=45.9
Q ss_pred CCCceEEEEeec-hhhHHHHHHHHHh-CCCcEE-EecCCCChhHHHH-HHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 73 NRKGWIHFVGIG-GSGLSALAKLALK-QGFEVS-GSDLVWSSYMEGL-LEAGANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 73 ~~~~~v~vlG~G-~sG~~~la~~l~~-~G~~v~-g~D~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+++-+|.|||.| ..|..-+..+... .+.++. +.|.+. +..+.+ .+.|+.-... +..++.. ....|+|++..
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~-~~~~~~a~~~~~~~~~~-~~~~ll~---~~~vD~V~i~t 90 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTR-SHAEEFAKMVGNPAVFD-SYEELLE---SGLVDAVDLTL 90 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSH-HHHHHHHHHHSSCEEES-CHHHHHH---SSCCSEEEECC
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCH-HHHHHHHHHhCCCcccC-CHHHHhc---CCCCCEEEEeC
Confidence 445679999999 6776544343333 455654 456432 223333 3346522222 1111110 01478888854
Q ss_pred CCCCCC-HHHHHHHHCCCCeeeH
Q 009279 149 AIPQDN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 149 ~i~~~~-~~l~~a~~~gi~vi~~ 170 (538)
.- ..| +...+|.+.|..|+.+
T Consensus 91 p~-~~H~~~~~~al~aGkhVl~E 112 (340)
T 1zh8_A 91 PV-ELNLPFIEKALRKGVHVICE 112 (340)
T ss_dssp CG-GGHHHHHHHHHHTTCEEEEE
T ss_pred Cc-hHHHHHHHHHHHCCCcEEEe
Confidence 21 223 3444556667777654
No 461
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=48.70 E-value=17 Score=35.64 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=24.8
Q ss_pred CcEEEEeCCC--CchHHHHHHHHHHHHcCCCe
Q 009279 181 YNLIAVSGSH--GKSTTASMLAYVLKAMGDDL 210 (538)
Q Consensus 181 ~~vI~VTGTn--GKTTTt~ml~~iL~~~G~~v 210 (538)
..+|+|.|-| ||||+...|+.+++..+.++
T Consensus 102 g~vi~lvG~nGsGKTTll~~Lagll~~~~g~V 133 (304)
T 1rj9_A 102 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKV 133 (304)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHhcCCEE
Confidence 4688888876 69999999999998776654
No 462
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=48.61 E-value=11 Score=38.56 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=61.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCCCCH
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~~~~ 155 (538)
++|.|||+|..|++. |+.|...|.+|.++|..... .+.+.+.|+.... ..+.+. ...|+|++..-..+...
T Consensus 192 ktvGIIGlG~IG~~v-A~~l~a~G~~V~~~d~~~~~-~~~~~~~G~~~~~--~l~ell-----~~aDvV~l~~Plt~~t~ 262 (393)
T 2nac_A 192 MHVGTVAAGRIGLAV-LRRLAPFDVHLHYTDRHRLP-ESVEKELNLTWHA--TREDMY-----PVCDVVTLNCPLHPETE 262 (393)
T ss_dssp CEEEEECCSHHHHHH-HHHHGGGTCEEEEECSSCCC-HHHHHHHTCEECS--SHHHHG-----GGCSEEEECSCCCTTTT
T ss_pred CEEEEEeECHHHHHH-HHHHHhCCCEEEEEcCCccc-hhhHhhcCceecC--CHHHHH-----hcCCEEEEecCCchHHH
Confidence 569999999999985 77777889999999965322 1234455766421 111211 25788888532211111
Q ss_pred HHHHHHHCCCCeeeHHHHHHHHhcCCcEEEEeCCCCchHHHHHHHHHHHHc
Q 009279 156 EILHAKSVGVPIYKRDYWLAKLTEKYNLIAVSGSHGKSTTASMLAYVLKAM 206 (538)
Q Consensus 156 ~l~~a~~~gi~vi~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 206 (538)
.++.+ +.+... ++ ..+-|--+.|.--...-+.+.|+..
T Consensus 263 ----------~li~~-~~l~~m-k~-gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 263 ----------HMIND-ETLKLF-KR-GAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp ----------TCBSH-HHHTTS-CT-TEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred ----------HHhhH-HHHhhC-CC-CCEEEECCCchHhhHHHHHHHHHcC
Confidence 11221 222222 22 3455544467766666677778753
No 463
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=48.54 E-value=13 Score=35.26 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=28.0
Q ss_pred hhcCCCceEEEEeec---hhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 70 DFKNRKGWIHFVGIG---GSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 70 ~~~~~~~~v~vlG~G---~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
++++ |.++|-|.+ +.|++ +|+.|+..|++|..+|.+.
T Consensus 3 ~l~g--K~alVTGaa~~~GIG~a-iA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 3 NLEN--KTYVIMGIANKRSIAFG-VAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp CCTT--CEEEEECCCSTTCHHHH-HHHHHHHTTCEEEEEESSG
T ss_pred CCCC--CEEEEECCCCCchHHHH-HHHHHHHCCCEEEEEECCH
Confidence 4555 557888874 56775 5888899999999998653
No 464
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=48.42 E-value=8.6 Score=35.59 Aligned_cols=25 Identities=24% Similarity=0.215 Sum_probs=15.8
Q ss_pred CCcEEEEeCCC--CchHHHHHHH-HHHH
Q 009279 180 KYNLIAVSGSH--GKSTTASMLA-YVLK 204 (538)
Q Consensus 180 ~~~vI~VTGTn--GKTTTt~ml~-~iL~ 204 (538)
...+|+|+|-| ||||+..+|. ..+.
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~~ 53 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQKN 53 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC----
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45799999988 6999999998 7763
No 465
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=48.36 E-value=16 Score=35.36 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=26.4
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|...+.+
T Consensus 127 ~k~vlVlGaGG~g~ai-a~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAV-AYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHH-HHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHH-HHHHHHCCCCEEEEEECC
Confidence 4679999999999986 556667898 69888754
No 466
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=48.35 E-value=15 Score=36.85 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=32.8
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG 120 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~G 120 (538)
..+|.|||.|.-|.+ +|..|+..|++|.++|.+. +.++.+.+.|
T Consensus 29 ~mkI~VIGaG~mG~a-lA~~La~~G~~V~l~~r~~-~~~~~i~~~~ 72 (356)
T 3k96_A 29 KHPIAILGAGSWGTA-LALVLARKGQKVRLWSYES-DHVDEMQAEG 72 (356)
T ss_dssp CSCEEEECCSHHHHH-HHHHHHTTTCCEEEECSCH-HHHHHHHHHS
T ss_pred CCeEEEECccHHHHH-HHHHHHHCCCeEEEEeCCH-HHHHHHHHcC
Confidence 346999999999986 6888899999999998542 2344454444
No 467
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=48.10 E-value=12 Score=38.91 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|..
T Consensus 12 ~dVvVIGgG~aGl~a-A~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 12 YDYLVIGGGSGGVAS-ARRAASYGAKTLLVEAK 43 (479)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTSCCEEEEESS
T ss_pred CCEEEEcCCHHHHHH-HHHHHHCCCcEEEEeCC
Confidence 458899999999987 67777899999999854
No 468
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=48.06 E-value=14 Score=38.22 Aligned_cols=45 Identities=13% Similarity=-0.006 Sum_probs=32.6
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCe
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGAN 122 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~ 122 (538)
++|.|+|.|..|+++ |..|+..|.+|.++|.++. -...+...|..
T Consensus 221 ktV~ViG~G~IGk~v-A~~Lra~Ga~Viv~D~dp~-ra~~A~~~G~~ 265 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGC-CAALKAMGSIVYVTEIDPI-CALQACMDGFR 265 (435)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSCHH-HHHHHHHTTCE
T ss_pred CEEEEEeeCHHHHHH-HHHHHHCCCEEEEEeCChh-hhHHHHHcCCE
Confidence 568999999999986 6777889999999995421 12234455653
No 469
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=48.01 E-value=29 Score=35.17 Aligned_cols=80 Identities=21% Similarity=0.203 Sum_probs=50.7
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCC-------h-----hHHHHHHCCCeEEeCCCCCCc---------C
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWS-------S-----YMEGLLEAGANLHIGHSVSNI---------Q 133 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~-------~-----~~~~~~~~Ga~~~~~~~~~~~---------~ 133 (538)
.+++.|+|.|.+|+-+ |..|+..|.+|+..+.... + ..+.+.+.|+.+..+.....+ .
T Consensus 143 ~~~vvViGgG~~g~E~-A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~ 221 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEV-ATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVM 221 (410)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEE
T ss_pred CCeEEEECCCHHHHHH-HHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEE
Confidence 4679999999999986 6777889999998875421 1 123355678887654221111 0
Q ss_pred CCCC-CCCCCEEEEcCCCCCCCH
Q 009279 134 GNDG-SRFPNAVVASSAIPQDNV 155 (538)
Q Consensus 134 ~~~~-~~~~d~vvvsp~i~~~~~ 155 (538)
..++ .-.+|.||+..|..+..+
T Consensus 222 ~~dg~~i~aD~Vv~a~G~~p~~~ 244 (410)
T 3ef6_A 222 ASDGRSFVADSALICVGAEPADQ 244 (410)
T ss_dssp ETTSCEEECSEEEECSCEEECCH
T ss_pred ECCCCEEEcCEEEEeeCCeecHH
Confidence 0000 113789999998876654
No 470
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=47.99 E-value=16 Score=35.46 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=26.9
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|++. +..|+..|. +|.+.+.+
T Consensus 126 ~k~vlvlGaGg~g~ai-a~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGV-LKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHH-HHHHHhcCCCeEEEEECC
Confidence 4679999999999975 666677995 89988864
No 471
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=47.80 E-value=17 Score=37.45 Aligned_cols=32 Identities=38% Similarity=0.358 Sum_probs=26.3
Q ss_pred CcEEEEeCC--CCchHHHHHHHHHHHHcCCCeEE
Q 009279 181 YNLIAVSGS--HGKSTTASMLAYVLKAMGDDLTA 212 (538)
Q Consensus 181 ~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~v~~ 212 (538)
..+|+++|- .|||||+..++..|...|.++..
T Consensus 98 ~~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vll 131 (425)
T 2ffh_A 98 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLL 131 (425)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 357888775 47999999999999998988654
No 472
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=47.71 E-value=12 Score=40.23 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=26.9
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|++| |..|+..|.+|.+.+..
T Consensus 9 DVvVVGaG~AGl~A-A~~la~~G~~V~vlEK~ 39 (588)
T 2wdq_A 9 DAVVIGAGGAGMRA-ALQISQSGQTCALLSKV 39 (588)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCcEEEEecC
Confidence 48899999999987 77888899999999843
No 473
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=47.69 E-value=14 Score=38.24 Aligned_cols=32 Identities=25% Similarity=0.137 Sum_probs=27.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|..
T Consensus 5 ~dVvIIGgG~aGl~a-A~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAV-AEKAAAFGKRVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHHHHH-HHHHHhCCCcEEEEcCC
Confidence 468899999999987 66777799999999854
No 474
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=47.65 E-value=12 Score=40.58 Aligned_cols=31 Identities=32% Similarity=0.357 Sum_probs=27.0
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|++| |..|+.+|.+|.+.+..
T Consensus 20 DVvVVG~G~AGl~A-Al~aa~~G~~V~vlEK~ 50 (621)
T 2h88_A 20 DAVVVGAGGAGLRA-AFGLSEAGFNTACVTKL 50 (621)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CEEEECccHHHHHH-HHHHHHCCCcEEEEecc
Confidence 48899999999987 77888899999998843
No 475
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=47.50 E-value=16 Score=35.46 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=26.4
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|...+.+
T Consensus 122 ~k~vlvlGaGGaarai-a~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAV-LQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHH-HHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHH-HHHHHHcCCCEEEEEeCC
Confidence 4679999999999986 556667898 89888754
No 476
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=47.34 E-value=9.1 Score=38.75 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=45.7
Q ss_pred ceEEEEeec-hhhHHHHHHHHHhCCCcEE-EecCCCChhHHH-HHHCCCeEEeCCCCCCcCCCCCCCCCCEEEEcCCCCC
Q 009279 76 GWIHFVGIG-GSGLSALAKLALKQGFEVS-GSDLVWSSYMEG-LLEAGANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQ 152 (538)
Q Consensus 76 ~~v~vlG~G-~sG~~~la~~l~~~G~~v~-g~D~~~~~~~~~-~~~~Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp~i~~ 152 (538)
.+|.|||.| ..|..-+..+....+.++. +.|.+.. ..+. +.+.|+..+-. .+++.. ....|+|++... +.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~-~~~~~a~~~g~~~~~~--~~ell~---~~~vD~V~i~tp-~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNED-VRERFGKEYGIPVFAT--LAEMMQ---HVQMDAVYIASP-HQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHH-HHHHHHHHHTCCEESS--HHHHHH---HSCCSEEEECSC-GG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHH-HHHHHHHHcCCCeECC--HHHHHc---CCCCCEEEEcCC-cH
Confidence 468999999 6665544444455677766 4564322 2222 23447764322 111110 014788888542 12
Q ss_pred CCH-HHHHHHHCCCCeeeH
Q 009279 153 DNV-EILHAKSVGVPIYKR 170 (538)
Q Consensus 153 ~~~-~l~~a~~~gi~vi~~ 170 (538)
.|. ...+|.+.|..|+.+
T Consensus 76 ~H~~~~~~al~aGk~Vl~E 94 (387)
T 3moi_A 76 FHCEHVVQASEQGLHIIVE 94 (387)
T ss_dssp GHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHCCCceeee
Confidence 233 344555667766654
No 477
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=47.23 E-value=18 Score=37.20 Aligned_cols=71 Identities=15% Similarity=-0.012 Sum_probs=36.7
Q ss_pred CCceEEEEeechhhHHHHHHHHHh-CCCcEE-EecCCCChhHHHH-HHCCCe---EEeCCCCCCcCCCCCCCCCCEEEEc
Q 009279 74 RKGWIHFVGIGGSGLSALAKLALK-QGFEVS-GSDLVWSSYMEGL-LEAGAN---LHIGHSVSNIQGNDGSRFPNAVVAS 147 (538)
Q Consensus 74 ~~~~v~vlG~G~sG~~~la~~l~~-~G~~v~-g~D~~~~~~~~~~-~~~Ga~---~~~~~~~~~~~~~~~~~~~d~vvvs 147 (538)
++-+|.|||.|..|...++..|.. .+.++. +.|.+.. ..+.+ .+.|+. +....+..++.. ....|+|++.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~-~~~~~a~~~g~~~~~~~~~~~~~~ll~---~~~vD~V~ia 157 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAE-KAKIVAAEYGVDPRKIYDYSNFDKIAK---DPKIDAVYII 157 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHH-HHHHHHHHTTCCGGGEECSSSGGGGGG---CTTCCEEEEC
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHH-HHHHHHHHhCCCcccccccCCHHHHhc---CCCCCEEEEc
Confidence 345799999999886334444443 456654 5664322 23333 345764 222222222221 1257888885
Q ss_pred C
Q 009279 148 S 148 (538)
Q Consensus 148 p 148 (538)
.
T Consensus 158 t 158 (433)
T 1h6d_A 158 L 158 (433)
T ss_dssp S
T ss_pred C
Confidence 4
No 478
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=47.21 E-value=14 Score=39.28 Aligned_cols=33 Identities=24% Similarity=0.113 Sum_probs=28.0
Q ss_pred CceEEEEeechhhHHHHHHHHHh---CCCcEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALK---QGFEVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~---~G~~v~g~D~~ 108 (538)
..+|+|||.|.+|.++ |..|+. .|.+|...|..
T Consensus 25 ~~dVvIVGgG~aGl~a-A~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMA-ASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHHHTTTSSEEEEEECC
T ss_pred CCcEEEECCCHHHHHH-HHHHHhhcCCCCcEEEEeCC
Confidence 4569999999999986 778888 99999999853
No 479
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=47.15 E-value=22 Score=33.49 Aligned_cols=30 Identities=30% Similarity=0.428 Sum_probs=26.2
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHHHcCCC
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLKAMGDD 209 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~~~G~~ 209 (538)
+..+|.|.|- .||||.+..|...|...|++
T Consensus 26 ~~~~i~~eG~~GsGKsT~~~~l~~~l~~~~~~ 57 (236)
T 3lv8_A 26 NAKFIVIEGLEGAGKSTAIQVVVETLQQNGID 57 (236)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCC
Confidence 4568999985 47999999999999999987
No 480
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=47.15 E-value=16 Score=37.70 Aligned_cols=31 Identities=29% Similarity=0.320 Sum_probs=27.2
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|..|..| |..++..|.+|...+.+
T Consensus 3 dViVIGgG~AG~~A-A~~la~~G~~V~liE~~ 33 (443)
T 3g5s_A 3 RVNVVGAGLAGSEA-AWTLLRLGVPVRLFEMR 33 (443)
T ss_dssp CEEEECCSHHHHHH-HHHHHHTTCCEEEECCT
T ss_pred CEEEECchHHHHHH-HHHHHHCCCcEEEEecc
Confidence 47899999999987 78889999999999854
No 481
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=47.12 E-value=13 Score=39.36 Aligned_cols=33 Identities=18% Similarity=-0.060 Sum_probs=27.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|...
T Consensus 44 ~dVvIIGgG~aGl~a-A~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFG-SAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHH-HHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCCEEEEeCCC
Confidence 458899999999987 677788899999998543
No 482
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=47.09 E-value=9.4 Score=40.85 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=28.3
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVW 109 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~ 109 (538)
..|+|||.|.+|+++ |..|+.+|.+|...|...
T Consensus 108 ~DVVIVGgGpaGL~a-A~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFA-GLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCEEECCSHHHHHH-HHHHHHTTCCCEEECSSC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCeEEEEEccC
Confidence 358899999999986 788889999999998654
No 483
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=47.02 E-value=8 Score=34.53 Aligned_cols=23 Identities=35% Similarity=0.319 Sum_probs=19.9
Q ss_pred cEEEEeCCC--CchHHHHHHHHHHH
Q 009279 182 NLIAVSGSH--GKSTTASMLAYVLK 204 (538)
Q Consensus 182 ~vI~VTGTn--GKTTTt~ml~~iL~ 204 (538)
++|+|+|-| ||||+..+|...+.
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~ 26 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCG
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCC
Confidence 478999977 59999999999886
No 484
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=47.01 E-value=15 Score=38.25 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=27.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
++|.|+|.|..|+.+ |..++..|.+|.++|.+
T Consensus 248 KTVgVIG~G~IGr~v-A~~lrafGa~Viv~d~d 279 (464)
T 3n58_A 248 KVAVVCGYGDVGKGS-AQSLAGAGARVKVTEVD 279 (464)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHH-HHHHHHCCCEEEEEeCC
Confidence 578999999999986 77788899999999853
No 485
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=47.01 E-value=20 Score=35.88 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=35.5
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhHHHHHHCCCeEEeC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYMEGLLEAGANLHIG 126 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~~~~~~~Ga~~~~~ 126 (538)
.+|+|+|.|..|..++ .+++..|+ +|.+.|.... ..+.+.+.|+...+.
T Consensus 195 ~~VlV~GaG~vG~~a~-q~a~~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~ 244 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVA-EGAKTAGASRIIGIDIDSK-KYETAKKFGVNEFVN 244 (378)
T ss_dssp CCEEEECCSHHHHHHH-HHHHHHTCSCEEEECSCTT-HHHHHHTTTCCEEEC
T ss_pred CEEEEECCCHHHHHHH-HHHHHcCCCeEEEEcCCHH-HHHHHHHcCCcEEEc
Confidence 3589999999999874 55667898 8999985543 345566778866543
No 486
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=46.88 E-value=13 Score=40.83 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=26.4
Q ss_pred EEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 78 IHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 78 v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
|+|||.|.+|++| |..|+..|.+|.+.+..
T Consensus 8 VvVIGgG~AGL~A-Al~aae~G~~V~vlEK~ 37 (660)
T 2bs2_A 8 SLVIGGGLAGLRA-AVATQQKGLSTIVLSLI 37 (660)
T ss_dssp EEEECCSHHHHHH-HHHHHTTTCCEEEECSS
T ss_pred EEEECchHHHHHH-HHHHHHCCCcEEEEecc
Confidence 7899999999987 77888899999999843
No 487
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=46.66 E-value=13 Score=39.94 Aligned_cols=31 Identities=23% Similarity=0.089 Sum_probs=27.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|.++ |..|+..|.+|.+.|..
T Consensus 51 DVvIVGaG~aGL~~-A~~La~~G~~V~VlEr~ 81 (570)
T 3fmw_A 51 DVVVVGGGPVGLML-AGELRAGGVGALVLEKL 81 (570)
T ss_dssp CEEEECCSHHHHHH-HHHHHHTTCCEEEEBSC
T ss_pred CEEEECcCHHHHHH-HHHHHHCCCCEEEEcCC
Confidence 48899999999975 88889999999999854
No 488
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=46.66 E-value=25 Score=35.66 Aligned_cols=49 Identities=24% Similarity=0.151 Sum_probs=34.7
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCC-cEEEecCCCChhHHHHHHCCCeEEeC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLVWSSYMEGLLEAGANLHIG 126 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~~~~~~~~~~~~Ga~~~~~ 126 (538)
.+|+|+|.|+.|..+ +.+++..|+ +|.+.|... +..+.+.+.|+..++.
T Consensus 215 ~~VlV~GaG~vG~~a-iqlak~~Ga~~Vi~~~~~~-~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 215 DNVVILGGGPIGLAA-VAILKHAGASKVILSEPSE-VRRNLAKELGADHVID 264 (404)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCSEEEEECSCH-HHHHHHHHHTCSEEEC
T ss_pred CEEEEECCCHHHHHH-HHHHHHcCCCEEEEECCCH-HHHHHHHHcCCCEEEc
Confidence 358999999999987 456667899 899987432 2344556678765543
No 489
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=46.46 E-value=14 Score=37.52 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=25.8
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCc--EEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFE--VSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~--v~g~D~ 107 (538)
++|+|||.|.+|+++ |..|+.+|++ |...+.
T Consensus 3 ~~vvIIGaG~AGl~a-A~~L~~~g~~~~V~li~~ 35 (410)
T 3ef6_A 3 THVAIIGNGVGGFTT-AQALRAEGFEGRISLIGD 35 (410)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCCSEEEEEEC
T ss_pred CCEEEEcccHHHHHH-HHHHHccCcCCeEEEEEC
Confidence 368899999999997 6777889988 887664
No 490
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=46.43 E-value=11 Score=35.46 Aligned_cols=25 Identities=36% Similarity=0.474 Sum_probs=20.7
Q ss_pred CCcEEEEeCC--CCchHHHHHHHHHHH
Q 009279 180 KYNLIAVSGS--HGKSTTASMLAYVLK 204 (538)
Q Consensus 180 ~~~vI~VTGT--nGKTTTt~ml~~iL~ 204 (538)
...+|+|||. .||||++.+|+..|.
T Consensus 21 ~~~iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 21 EPFLIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4568999995 699999999988764
No 491
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=46.41 E-value=24 Score=34.97 Aligned_cols=48 Identities=21% Similarity=0.162 Sum_probs=33.9
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEe
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHI 125 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~ 125 (538)
.+|+|+|.|+.|+.+ +.+++..|++|.+.|... +..+.+.+.|+...+
T Consensus 170 ~~VlV~GaG~vG~~a-~qla~~~Ga~Vi~~~~~~-~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVS-VLAAKAYGAFVVCTARSP-RRLEVAKNCGADVTL 217 (352)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESCH-HHHHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHcCCEEEEEcCCH-HHHHHHHHhCCCEEE
Confidence 458999999999987 456677899999887432 234456677875433
No 492
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.36 E-value=14 Score=38.40 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=27.1
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.+|.|||.|.+|+++ |..|+..|.+|...|.
T Consensus 6 ~dVvIIGgG~aGl~a-A~~l~~~G~~V~liE~ 36 (478)
T 1v59_A 6 HDVVIIGGGPAGYVA-AIKAAQLGFNTACVEK 36 (478)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHHHHH-HHHHHHCCCeEEEEec
Confidence 458899999999987 7777889999999986
No 493
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.31 E-value=14 Score=38.15 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=26.4
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDL 107 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~ 107 (538)
.|+|||.|.+|+++ |..|+..|.+|...|.
T Consensus 6 DVvVIGgG~aGl~a-A~~l~~~G~~V~liEk 35 (466)
T 3l8k_A 6 DVVVIGAGGAGYHG-AFRLAKAKYNVLMADP 35 (466)
T ss_dssp EEEEECCSHHHHHH-HHHHHHTTCCEEEECT
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCeEEEEEC
Confidence 48899999999987 6777889999999983
No 494
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=46.24 E-value=14 Score=38.17 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=27.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.+|.|||.|..|+++ |..|+..|.+|...|..
T Consensus 5 ~dvvIIGgG~aGl~a-A~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIAS-INRAAMYGQKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHH-HHHHHTTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHH-HHHHHhCCCeEEEEcCC
Confidence 458899999999987 67778899999999854
No 495
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=45.90 E-value=18 Score=36.13 Aligned_cols=88 Identities=17% Similarity=0.047 Sum_probs=44.7
Q ss_pred CCCceEEEEeechhhHHHHHHHHH-hCCCcEE-EecCCCChhHHHH-HHC-CCeEEeCCCCCCcCCCCCCCCCCEEEEcC
Q 009279 73 NRKGWIHFVGIGGSGLSALAKLAL-KQGFEVS-GSDLVWSSYMEGL-LEA-GANLHIGHSVSNIQGNDGSRFPNAVVASS 148 (538)
Q Consensus 73 ~~~~~v~vlG~G~sG~~~la~~l~-~~G~~v~-g~D~~~~~~~~~~-~~~-Ga~~~~~~~~~~~~~~~~~~~~d~vvvsp 148 (538)
+++-+|.|||.|..|....+..++ ..|.++. +.|.+. +.+ .+. |+.++- +.+++.. ....|+|++..
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~----~~~~~~~~~~~~~~--~~~~ll~---~~~~D~V~i~t 75 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDE----EKVKRDLPDVTVIA--SPEAAVQ---HPDVDLVVIAS 75 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCH----HHHHHHCTTSEEES--CHHHHHT---CTTCSEEEECS
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCH----HHHHhhCCCCcEEC--CHHHHhc---CCCCCEEEEeC
Confidence 344579999999999863344444 4577776 456432 122 222 444432 1111110 12578888853
Q ss_pred CCCCCC-HHHHHHHHCCCCeeeH
Q 009279 149 AIPQDN-VEILHAKSVGVPIYKR 170 (538)
Q Consensus 149 ~i~~~~-~~l~~a~~~gi~vi~~ 170 (538)
.- ..| +...+|.+.|..|+.+
T Consensus 76 p~-~~H~~~~~~al~aGk~Vl~E 97 (364)
T 3e82_A 76 PN-ATHAPLARLALNAGKHVVVD 97 (364)
T ss_dssp CG-GGHHHHHHHHHHTTCEEEEC
T ss_pred Ch-HHHHHHHHHHHHCCCcEEEe
Confidence 21 223 3344555666666654
No 496
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=45.72 E-value=18 Score=35.66 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=26.5
Q ss_pred CceEEEEeechhhHHHHHHHHHhCCC-cEEEecCC
Q 009279 75 KGWIHFVGIGGSGLSALAKLALKQGF-EVSGSDLV 108 (538)
Q Consensus 75 ~~~v~vlG~G~sG~~~la~~l~~~G~-~v~g~D~~ 108 (538)
.++++|+|.|+.|+++ +..|+..|. +|...+.+
T Consensus 148 gk~~lVlGAGGaarai-a~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAI-GAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHH-HHHHHHcCCCEEEEEECC
Confidence 4679999999999986 566667898 78888765
No 497
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=45.72 E-value=23 Score=35.42 Aligned_cols=49 Identities=29% Similarity=0.251 Sum_probs=35.2
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~ 126 (538)
.+|+|+|.|+.|..+ +.+++..|++|.+.|.+.. ..+.+.+.|+..++.
T Consensus 196 ~~VlV~GaG~vG~~a-iqlak~~Ga~Vi~~~~~~~-~~~~a~~lGa~~vi~ 244 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMG-IKLAHAMGAHVVAFTTSEA-KREAAKALGADEVVN 244 (369)
T ss_dssp CEEEEECCSHHHHHH-HHHHHHTTCEEEEEESSGG-GHHHHHHHTCSEEEE
T ss_pred CEEEEECCCHHHHHH-HHHHHHCCCEEEEEeCCHH-HHHHHHHcCCcEEec
Confidence 358999999999987 4566778999999885432 344566678866553
No 498
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=45.63 E-value=20 Score=32.33 Aligned_cols=48 Identities=21% Similarity=0.117 Sum_probs=31.6
Q ss_pred eEEEEee-chhhHHHHHHHHHhCCCcEEEecCCCChhHHHHHHCCCeEEeC
Q 009279 77 WIHFVGI-GGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAGANLHIG 126 (538)
Q Consensus 77 ~v~vlG~-G~sG~~~la~~l~~~G~~v~g~D~~~~~~~~~~~~~Ga~~~~~ 126 (538)
+|+|.|. |..|... ++.|+.+|++|.+.+.+.. -...+...++.++.+
T Consensus 2 kilVtGatG~iG~~l-~~~L~~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~ 50 (224)
T 3h2s_A 2 KIAVLGATGRAGSAI-VAEARRRGHEVLAVVRDPQ-KAADRLGATVATLVK 50 (224)
T ss_dssp EEEEETTTSHHHHHH-HHHHHHTTCEEEEEESCHH-HHHHHTCTTSEEEEC
T ss_pred EEEEEcCCCHHHHHH-HHHHHHCCCEEEEEEeccc-ccccccCCCceEEec
Confidence 4889998 7888875 5666678999999985422 222333356666544
No 499
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=45.60 E-value=15 Score=38.21 Aligned_cols=30 Identities=33% Similarity=0.361 Sum_probs=26.4
Q ss_pred ceEEEEeechhhHHHHHHHHHhCCCcEEEec
Q 009279 76 GWIHFVGIGGSGLSALAKLALKQGFEVSGSD 106 (538)
Q Consensus 76 ~~v~vlG~G~sG~~~la~~l~~~G~~v~g~D 106 (538)
-.|+|||.|.+|++| |..|+..|.+|...|
T Consensus 10 ~DvvVIGgG~aGl~a-A~~la~~G~~V~liE 39 (483)
T 3dgh_A 10 YDLIVIGGGSAGLAC-AKEAVLNGARVACLD 39 (483)
T ss_dssp EEEEEECCSHHHHHH-HHHHHHTTCCEEEEC
T ss_pred CCEEEECcCHHHHHH-HHHHHHCCCEEEEEE
Confidence 358899999999987 777788999999998
No 500
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=45.52 E-value=13 Score=38.68 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=26.7
Q ss_pred eEEEEeechhhHHHHHHHHHhCCCcEEEecCC
Q 009279 77 WIHFVGIGGSGLSALAKLALKQGFEVSGSDLV 108 (538)
Q Consensus 77 ~v~vlG~G~sG~~~la~~l~~~G~~v~g~D~~ 108 (538)
.|+|||.|.+|+++ |..|+..|.+|...|..
T Consensus 22 dVvIIGgG~aGl~a-A~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 22 DYLVIGGGSGGLAS-ARRAAELGARAAVVESH 52 (478)
T ss_dssp SEEEECCSHHHHHH-HHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHHHHHH-HHHHHhCCCeEEEEecC
Confidence 47899999999987 77778899999999843
Done!