Query 009282
Match_columns 538
No_of_seqs 224 out of 1855
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 22:39:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02942 dihydropyrimidinase 100.0 1.4E-66 2.9E-71 539.6 52.9 482 52-533 4-485 (486)
2 KOG2584 Dihydroorotase and rel 100.0 1.3E-64 2.9E-69 474.8 34.2 483 52-534 13-501 (522)
3 PRK13404 dihydropyrimidinase; 100.0 3.4E-58 7.3E-63 474.7 52.2 454 52-510 3-465 (477)
4 TIGR02033 D-hydantoinase D-hyd 100.0 4.5E-58 9.8E-63 477.1 50.8 451 55-506 1-454 (454)
5 PRK08323 phenylhydantoinase; V 100.0 1.3E-57 2.8E-62 473.8 51.5 452 54-510 2-456 (459)
6 cd01314 D-HYD D-hydantoinases 100.0 2.6E-57 5.5E-62 469.7 50.3 445 55-501 1-447 (447)
7 PLN02795 allantoinase 100.0 7.9E-56 1.7E-60 458.6 53.7 449 46-506 37-504 (505)
8 COG0044 PyrC Dihydroorotase an 100.0 1E-55 2.2E-60 442.2 46.8 425 54-497 2-428 (430)
9 PRK06189 allantoinase; Provisi 100.0 1.2E-54 2.6E-59 447.6 50.5 442 51-507 1-448 (451)
10 PRK08044 allantoinase; Provisi 100.0 1.5E-54 3.2E-59 444.8 49.7 438 52-505 2-449 (449)
11 TIGR03178 allantoinase allanto 100.0 6.9E-54 1.5E-58 441.8 49.4 436 54-504 1-442 (443)
12 cd01315 L-HYD_ALN L-Hydantoina 100.0 1.4E-53 3.1E-58 441.7 50.9 441 54-505 1-447 (447)
13 PRK07627 dihydroorotase; Provi 100.0 1E-53 2.2E-58 434.5 43.2 418 54-491 2-424 (425)
14 PRK07369 dihydroorotase; Provi 100.0 5.4E-53 1.2E-57 427.8 42.8 411 53-483 2-418 (418)
15 PRK09236 dihydroorotase; Revie 100.0 1.2E-51 2.5E-56 424.5 50.0 436 53-507 2-443 (444)
16 PRK09059 dihydroorotase; Valid 100.0 1.6E-52 3.4E-57 426.3 43.0 419 52-490 2-428 (429)
17 PRK07575 dihydroorotase; Provi 100.0 2.1E-51 4.5E-56 421.1 48.5 430 52-506 2-436 (438)
18 PRK02382 dihydroorotase; Provi 100.0 1.9E-51 4E-56 422.9 47.7 431 53-507 2-436 (443)
19 PRK09060 dihydroorotase; Valid 100.0 3.7E-51 7.9E-56 419.6 48.6 431 52-507 4-439 (444)
20 PRK09357 pyrC dihydroorotase; 100.0 2E-50 4.3E-55 414.9 45.1 418 54-491 2-423 (423)
21 PRK08417 dihydroorotase; Provi 100.0 2.3E-50 4.9E-55 406.7 41.0 382 73-490 1-386 (386)
22 TIGR00857 pyrC_multi dihydroor 100.0 9.5E-49 2.1E-53 399.0 44.8 405 69-491 4-411 (411)
23 PRK01211 dihydroorotase; Provi 100.0 1.1E-48 2.5E-53 393.0 39.8 402 57-507 3-406 (409)
24 PRK04250 dihydroorotase; Provi 100.0 8.1E-47 1.8E-51 380.3 43.7 392 59-503 3-397 (398)
25 PRK00369 pyrC dihydroorotase; 100.0 3.7E-44 8.1E-49 358.4 40.5 375 70-507 13-390 (392)
26 cd01318 DHOase_IIb Dihydroorot 100.0 4.1E-43 8.9E-48 349.6 37.8 358 100-485 1-361 (361)
27 cd01317 DHOase_IIa Dihydroorot 100.0 1.1E-42 2.3E-47 350.7 36.5 370 93-481 2-374 (374)
28 cd01302 Cyclic_amidohydrolases 100.0 1.6E-41 3.5E-46 336.4 35.4 332 101-481 1-337 (337)
29 PRK09061 D-glutamate deacylase 100.0 5.3E-41 1.2E-45 348.3 40.3 400 52-507 18-507 (509)
30 PRK06687 chlorohydrolase; Vali 100.0 5E-41 1.1E-45 344.6 34.1 379 55-498 2-418 (419)
31 PRK15493 5-methylthioadenosine 100.0 3.7E-40 8.1E-45 338.0 35.0 379 54-498 2-418 (435)
32 cd01297 D-aminoacylase D-amino 100.0 4.6E-39 1E-43 328.5 35.3 356 54-497 1-411 (415)
33 PRK07228 N-ethylammeline chlor 100.0 1.5E-38 3.2E-43 329.1 35.6 380 54-498 2-422 (445)
34 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 1.2E-38 2.6E-43 328.0 33.6 372 55-495 1-411 (411)
35 PRK09045 N-ethylammeline chlor 100.0 3.7E-38 7.9E-43 325.2 35.0 378 52-498 6-423 (443)
36 PRK06380 metal-dependent hydro 100.0 1.2E-37 2.5E-42 319.8 35.9 376 54-498 2-408 (418)
37 cd01316 CAD_DHOase The eukaryo 100.0 4.8E-37 1.1E-41 302.2 37.3 339 101-500 2-343 (344)
38 PRK08204 hypothetical protein; 100.0 1.2E-37 2.5E-42 323.0 34.7 373 53-498 2-425 (449)
39 PRK08203 hydroxydechloroatrazi 100.0 1.1E-37 2.3E-42 322.8 33.9 375 55-498 4-432 (451)
40 PRK07203 putative chlorohydrol 100.0 4.9E-37 1.1E-41 316.8 35.9 375 55-498 2-423 (442)
41 PRK15446 phosphonate metabolis 100.0 5E-37 1.1E-41 308.4 33.1 359 53-492 2-383 (383)
42 TIGR03314 Se_ssnA putative sel 100.0 2.1E-36 4.5E-41 310.9 35.5 375 55-498 1-422 (441)
43 PRK06151 N-ethylammeline chlor 100.0 1.6E-36 3.4E-41 315.8 33.5 375 54-498 2-446 (488)
44 PRK06038 N-ethylammeline chlor 100.0 3.9E-36 8.5E-41 308.4 35.4 374 54-498 3-409 (430)
45 PRK12393 amidohydrolase; Provi 100.0 6.6E-36 1.4E-40 308.6 35.9 379 53-498 2-437 (457)
46 PRK08393 N-ethylammeline chlor 100.0 1.2E-35 2.5E-40 304.6 36.3 373 54-498 2-408 (424)
47 PRK09228 guanine deaminase; Pr 100.0 4.6E-36 9.9E-41 307.3 32.0 361 69-491 30-432 (433)
48 TIGR02318 phosphono_phnM phosp 100.0 1.5E-34 3.3E-39 289.4 33.4 354 56-489 1-376 (376)
49 COG1574 Predicted metal-depend 100.0 6.2E-36 1.3E-40 304.6 23.4 371 52-491 4-534 (535)
50 COG1228 HutI Imidazolonepropio 100.0 3E-35 6.6E-40 293.5 27.0 344 53-493 10-405 (406)
51 TIGR02967 guan_deamin guanine 100.0 7.7E-35 1.7E-39 297.5 30.7 355 69-485 5-401 (401)
52 cd01303 GDEase Guanine deamina 100.0 1.5E-34 3.3E-39 296.3 32.3 356 69-485 25-429 (429)
53 PRK12394 putative metallo-depe 100.0 8.5E-34 1.9E-38 286.5 34.6 345 52-493 2-378 (379)
54 PRK09356 imidazolonepropionase 100.0 7.1E-34 1.5E-38 291.2 32.2 345 51-490 1-406 (406)
55 cd01293 Bact_CD Bacterial cyto 100.0 6.2E-34 1.4E-38 291.8 29.4 352 57-488 2-398 (398)
56 TIGR02022 hutF formiminoglutam 100.0 6.1E-34 1.3E-38 293.5 29.4 371 55-498 4-440 (455)
57 PRK13206 ureC urease subunit a 100.0 2.3E-33 4.9E-38 284.1 31.3 355 52-497 70-470 (573)
58 PRK07213 chlorohydrolase; Prov 100.0 3.4E-33 7.5E-38 281.5 32.6 341 55-487 2-375 (375)
59 PRK13985 ureB urease subunit b 100.0 4.5E-33 9.8E-38 279.2 30.8 350 52-497 64-465 (568)
60 PRK09229 N-formimino-L-glutama 100.0 2.3E-33 4.9E-38 290.2 29.7 369 53-495 3-437 (456)
61 PRK13308 ureC urease subunit a 100.0 7.4E-33 1.6E-37 279.0 31.7 348 52-496 67-465 (569)
62 cd00375 Urease_alpha Urease al 100.0 1.1E-32 2.4E-37 277.6 32.4 349 52-498 64-466 (567)
63 PRK13309 ureC urease subunit a 100.0 1.2E-32 2.6E-37 280.6 32.8 356 52-498 67-470 (572)
64 PRK08418 chlorohydrolase; Prov 100.0 2.1E-33 4.5E-38 285.2 27.0 368 55-488 2-407 (408)
65 PRK13207 ureC urease subunit a 100.0 1.7E-32 3.8E-37 278.6 32.3 352 52-498 66-466 (568)
66 cd01313 Met_dep_hydrolase_E Me 100.0 1.1E-32 2.4E-37 281.6 29.4 349 65-486 4-418 (418)
67 COG0402 SsnA Cytosine deaminas 100.0 2.9E-32 6.2E-37 279.1 32.1 373 54-495 3-414 (421)
68 TIGR01975 isoAsp_dipep isoaspa 100.0 1.3E-31 2.8E-36 267.5 35.1 360 55-497 2-385 (389)
69 COG1820 NagA N-acetylglucosami 100.0 6.7E-33 1.5E-37 264.9 24.0 354 55-490 2-380 (380)
70 PRK14085 imidazolonepropionase 100.0 7.6E-32 1.6E-36 272.8 32.8 315 54-452 2-365 (382)
71 COG1001 AdeC Adenine deaminase 100.0 2.3E-32 5E-37 271.8 27.5 333 50-498 21-367 (584)
72 PRK10657 isoaspartyl dipeptida 100.0 3.1E-31 6.7E-36 270.0 36.3 357 54-497 2-384 (388)
73 PRK07572 cytosine deaminase; V 100.0 6.7E-32 1.4E-36 276.8 30.7 359 53-492 2-404 (426)
74 TIGR01792 urease_alph urease, 100.0 4.8E-32 1E-36 275.9 29.2 348 52-498 65-465 (567)
75 PRK05985 cytosine deaminase; P 100.0 2.3E-31 5E-36 270.6 33.6 349 53-492 2-391 (391)
76 PRK09230 cytosine deaminase; P 100.0 2.5E-31 5.4E-36 271.3 32.9 360 53-491 4-407 (426)
77 PRK10027 cryptic adenine deami 100.0 1.2E-30 2.6E-35 270.8 34.2 328 52-495 29-370 (588)
78 TIGR01178 ade adenine deaminas 100.0 1.6E-30 3.6E-35 270.0 35.2 324 54-495 1-342 (552)
79 TIGR00221 nagA N-acetylglucosa 100.0 3.1E-31 6.8E-36 263.9 27.0 356 52-486 2-380 (380)
80 cd01312 Met_dep_hydrolase_D Me 100.0 1.5E-31 3.2E-36 268.9 24.6 343 78-486 1-381 (381)
81 PRK09237 dihydroorotase; Provi 100.0 2.8E-30 6.1E-35 261.6 32.7 351 55-496 1-375 (380)
82 cd01296 Imidazolone-5PH Imidaz 100.0 9.8E-31 2.1E-35 265.0 29.4 318 73-485 1-371 (371)
83 TIGR01224 hutI imidazoloneprop 100.0 1E-30 2.3E-35 265.2 29.4 323 69-487 2-377 (377)
84 PRK11170 nagA N-acetylglucosam 100.0 1E-30 2.2E-35 261.1 28.3 355 55-490 2-381 (382)
85 cd01299 Met_dep_hydrolase_A Me 100.0 3.1E-31 6.8E-36 265.6 22.8 301 93-455 1-339 (342)
86 PLN02303 urease 100.0 2E-30 4.3E-35 269.5 28.7 348 52-497 333-734 (837)
87 PRK07583 cytosine deaminase-li 100.0 9.4E-30 2E-34 261.7 33.2 358 52-492 10-425 (438)
88 cd01308 Isoaspartyl-dipeptidas 100.0 3.6E-29 7.8E-34 254.6 36.9 361 55-498 2-384 (387)
89 cd01294 DHOase Dihydroorotase 100.0 4.3E-29 9.3E-34 248.0 28.2 320 104-473 3-331 (335)
90 cd00854 NagA N-acetylglucosami 100.0 9.2E-29 2E-33 248.8 29.9 325 56-450 2-364 (374)
91 KOG3968 Atrazine chlorohydrola 100.0 7.3E-30 1.6E-34 242.2 18.8 360 69-490 26-438 (439)
92 cd01309 Met_dep_hydrolase_C Me 100.0 2.6E-28 5.6E-33 244.2 27.8 315 77-489 1-359 (359)
93 PRK06846 putative deaminase; V 100.0 1.1E-27 2.4E-32 244.6 32.6 349 54-491 5-406 (410)
94 COG3964 Predicted amidohydrola 100.0 9.6E-27 2.1E-31 210.4 25.1 311 52-450 3-339 (386)
95 cd01304 FMDH_A Formylmethanofu 100.0 1.2E-25 2.7E-30 226.6 35.9 401 57-508 1-514 (541)
96 COG3454 Metal-dependent hydrol 100.0 1E-26 2.2E-31 212.8 24.7 344 56-489 2-377 (377)
97 cd01300 YtcJ_like YtcJ_like me 100.0 8.8E-28 1.9E-32 251.1 19.4 190 210-446 290-479 (479)
98 cd01307 Met_dep_hydrolase_B Me 100.0 5.2E-26 1.1E-30 226.5 30.2 295 72-451 1-317 (338)
99 TIGR03121 one_C_dehyd_A formyl 100.0 3.6E-25 7.7E-30 224.4 34.2 398 55-507 2-515 (556)
100 TIGR00856 pyrC_dimer dihydroor 100.0 8.4E-26 1.8E-30 222.6 28.8 326 102-478 2-340 (341)
101 TIGR03583 EF_0837 probable ami 99.9 8.6E-25 1.9E-29 220.3 31.0 334 54-488 2-364 (365)
102 PRK05451 dihydroorotase; Provi 99.9 1.4E-24 3.1E-29 215.2 29.7 324 102-479 5-344 (345)
103 cd01295 AdeC Adenine deaminase 99.9 4.7E-24 1E-28 218.2 29.6 282 97-492 1-293 (422)
104 COG0804 UreC Urea amidohydrola 99.9 4E-24 8.7E-29 200.3 22.7 356 52-496 66-464 (568)
105 PLN02599 dihydroorotase 99.9 2.2E-22 4.9E-27 198.3 27.6 292 102-436 23-329 (364)
106 COG3653 N-acyl-D-aspartate/D-g 99.9 1.3E-21 2.9E-26 185.1 26.5 101 408-513 472-575 (579)
107 cd01306 PhnM PhnM is believed 99.9 3E-21 6.5E-26 187.1 24.8 274 104-485 1-325 (325)
108 PF13147 Amidohydro_4: Amidohy 99.9 7.1E-21 1.5E-25 187.0 22.2 299 97-445 1-304 (304)
109 PF01979 Amidohydro_1: Amidohy 99.8 1.5E-20 3.2E-25 188.0 16.2 290 102-448 1-333 (333)
110 KOG3892 N-acetyl-glucosamine-6 99.8 2.8E-20 6.2E-25 165.8 13.5 367 55-491 14-405 (407)
111 COG1229 FwdA Formylmethanofura 99.8 3.9E-17 8.5E-22 153.9 19.2 82 409-498 437-518 (575)
112 cd01305 archeal_chlorohydrolas 99.7 1.2E-16 2.6E-21 153.6 15.8 235 102-426 1-263 (263)
113 PF07969 Amidohydro_3: Amidohy 99.6 8.3E-15 1.8E-19 150.5 19.1 252 131-446 136-404 (404)
114 PF13594 Amidohydro_5: Amidohy 99.6 3.7E-15 8E-20 110.6 7.3 67 73-142 1-68 (68)
115 PRK06886 hypothetical protein; 99.6 1.3E-12 2.8E-17 127.5 24.2 267 105-430 20-328 (329)
116 cd01292 metallo-dependent_hydr 99.5 3E-13 6.6E-18 130.8 19.0 247 107-426 1-275 (275)
117 TIGR01430 aden_deam adenosine 99.1 2.5E-08 5.5E-13 98.9 22.1 142 211-430 168-313 (324)
118 COG0418 PyrC Dihydroorotase [N 99.0 9.3E-08 2E-12 88.2 21.9 284 103-430 6-304 (344)
119 cd01310 TatD_DNAse TatD like p 99.0 8.2E-08 1.8E-12 91.7 20.6 243 107-428 1-251 (251)
120 cd01320 ADA Adenosine deaminas 98.9 1.6E-07 3.5E-12 93.2 22.1 144 212-430 170-314 (325)
121 TIGR00010 hydrolase, TatD fami 98.9 1.6E-07 3.5E-12 89.7 19.4 245 107-429 1-252 (252)
122 cd00530 PTE Phosphotriesterase 98.8 5E-07 1.1E-11 88.4 21.5 263 106-427 1-293 (293)
123 COG0084 TatD Mg-dependent DNas 98.8 5.9E-07 1.3E-11 84.1 20.6 244 107-429 3-256 (256)
124 PRK10812 putative DNAse; Provi 98.8 5.6E-07 1.2E-11 85.8 20.9 249 107-430 3-257 (265)
125 PRK09358 adenosine deaminase; 98.8 7.3E-07 1.6E-11 89.1 21.7 145 211-430 178-323 (340)
126 PRK09875 putative hydrolase; P 98.8 1.7E-06 3.6E-11 83.1 22.1 260 106-428 7-292 (292)
127 KOG2902 Dihydroorotase [Nucleo 98.6 5.1E-06 1.1E-10 74.1 18.7 285 103-432 6-303 (344)
128 PRK11449 putative deoxyribonuc 98.6 8.1E-06 1.8E-10 77.6 21.8 248 104-429 2-258 (258)
129 PRK10425 DNase TatD; Provision 98.6 1E-05 2.3E-10 76.8 20.6 251 107-429 1-258 (258)
130 PF02126 PTE: Phosphotriestera 98.4 9.7E-06 2.1E-10 78.6 16.1 267 106-427 7-307 (308)
131 PF01026 TatD_DNase: TatD rela 98.4 2.8E-05 6.1E-10 74.2 18.5 244 108-428 1-255 (255)
132 COG1099 Predicted metal-depend 98.1 0.00031 6.8E-09 62.4 17.0 231 107-429 2-253 (254)
133 COG1735 Php Predicted metal-de 98.1 0.00055 1.2E-08 64.2 18.7 156 131-315 54-225 (316)
134 PF12890 DHOase: Dihydro-orota 97.9 5.3E-05 1.2E-09 61.5 7.2 135 100-293 1-139 (142)
135 cd01321 ADGF Adenosine deamina 97.8 0.0065 1.4E-07 60.4 21.8 148 212-429 176-329 (345)
136 PTZ00124 adenosine deaminase; 97.8 0.0034 7.3E-08 62.6 19.6 140 215-429 206-349 (362)
137 cd00443 ADA_AMPD Adenosine/AMP 97.4 0.02 4.4E-07 56.1 20.0 141 213-429 151-293 (305)
138 PF04909 Amidohydro_2: Amidohy 97.4 0.01 2.2E-07 57.1 16.7 186 181-429 83-273 (273)
139 PF00962 A_deaminase: Adenosin 97.3 0.0072 1.6E-07 60.2 15.6 173 181-429 146-320 (331)
140 cd01311 PDC_hydrolase 2-pyrone 97.1 0.12 2.5E-06 49.6 20.5 123 106-237 1-132 (263)
141 COG1816 Add Adenosine deaminas 97.0 0.037 8E-07 54.3 15.6 144 210-430 180-326 (345)
142 PF07908 D-aminoacyl_C: D-amin 96.5 0.0026 5.6E-08 42.9 3.1 30 476-506 18-47 (48)
143 COG2159 Predicted metal-depend 96.5 0.32 6.9E-06 47.3 18.8 176 182-430 112-291 (293)
144 TIGR01431 adm_rel adenosine de 96.5 0.51 1.1E-05 49.1 21.4 53 298-371 363-415 (479)
145 PF00449 Urease_alpha: Urease 96.5 0.0043 9.4E-08 49.0 4.4 35 52-86 65-99 (121)
146 KOG1097 Adenine deaminase/aden 96.0 0.26 5.7E-06 48.7 14.7 147 213-430 225-372 (399)
147 PRK00912 ribonuclease P protei 94.4 2.6 5.6E-05 39.6 16.0 69 351-440 159-228 (237)
148 COG4464 CapC Capsular polysacc 90.7 3.6 7.9E-05 37.0 10.4 40 107-146 1-41 (254)
149 PRK08609 hypothetical protein; 89.6 33 0.00072 36.9 19.4 38 103-144 324-368 (570)
150 COG3618 Predicted metal-depend 89.6 19 0.00042 34.2 22.2 25 214-238 123-147 (279)
151 PF07969 Amidohydro_3: Amidohy 88.2 0.16 3.4E-06 52.1 0.2 15 102-116 1-15 (404)
152 COG1831 Predicted metal-depend 85.1 34 0.00074 32.2 14.3 68 350-430 216-283 (285)
153 PRK06361 hypothetical protein; 83.6 15 0.00033 33.7 11.0 58 351-429 153-210 (212)
154 PRK08392 hypothetical protein; 83.6 36 0.00079 31.3 17.0 179 108-317 1-184 (215)
155 KOG3020 TatD-related DNase [Re 82.7 48 0.001 32.0 17.6 179 96-311 7-200 (296)
156 cd01319 AMPD AMP deaminase (AM 82.4 7.8 0.00017 40.4 9.2 91 298-430 363-453 (496)
157 PLN03055 AMP deaminase; Provis 81.9 7.8 0.00017 41.2 9.0 91 298-430 453-543 (602)
158 COG5016 Pyruvate/oxaloacetate 80.7 43 0.00092 33.6 12.9 124 128-255 101-227 (472)
159 TIGR01429 AMP_deaminase AMP de 79.8 21 0.00046 38.1 11.4 91 298-430 475-565 (611)
160 PRK14042 pyruvate carboxylase 77.8 59 0.0013 35.0 14.2 124 127-254 98-224 (596)
161 COG0826 Collagenase and relate 77.5 27 0.00058 34.8 10.9 116 182-310 13-140 (347)
162 PRK12330 oxaloacetate decarbox 77.0 66 0.0014 33.8 13.9 125 127-255 99-228 (499)
163 PTZ00310 AMP deaminase; Provis 76.4 12 0.00027 43.5 9.1 92 298-430 515-607 (1453)
164 PRK12581 oxaloacetate decarbox 76.3 93 0.002 32.4 14.6 123 128-254 108-233 (468)
165 PRK01060 endonuclease IV; Prov 75.5 62 0.0013 31.0 12.9 91 186-292 15-111 (281)
166 cd00959 DeoC 2-deoxyribose-5-p 73.8 66 0.0014 29.3 11.9 131 121-290 13-151 (203)
167 PLN02768 AMP deaminase 72.7 14 0.0003 40.5 7.9 91 298-430 686-776 (835)
168 PRK07945 hypothetical protein; 70.7 1.2E+02 0.0025 30.2 18.5 33 107-143 97-129 (335)
169 PTZ00310 AMP deaminase; Provis 70.0 20 0.00043 42.0 8.7 101 288-430 1135-1236(1453)
170 TIGR01496 DHPS dihydropteroate 69.3 69 0.0015 30.4 11.2 63 182-245 23-92 (257)
171 PRK12737 gatY tagatose-bisphos 67.2 86 0.0019 30.3 11.4 106 180-287 26-132 (284)
172 PRK12738 kbaY tagatose-bisphos 66.7 93 0.002 30.1 11.5 106 180-287 26-132 (286)
173 PRK07328 histidinol-phosphatas 66.7 1.2E+02 0.0026 28.9 17.7 47 270-317 177-231 (269)
174 TIGR01858 tag_bisphos_ald clas 66.6 92 0.002 30.0 11.4 106 180-287 24-130 (282)
175 PRK06852 aldolase; Validated 66.5 75 0.0016 30.9 10.8 86 185-292 118-210 (304)
176 PRK12331 oxaloacetate decarbox 64.9 1.8E+02 0.0039 30.2 14.7 123 128-254 99-224 (448)
177 PRK14041 oxaloacetate decarbox 64.3 1.6E+02 0.0035 30.7 13.4 121 129-254 99-223 (467)
178 PRK09195 gatY tagatose-bisphos 63.8 97 0.0021 29.9 11.0 106 180-287 26-132 (284)
179 smart00518 AP2Ec AP endonuclea 63.7 42 0.0009 32.1 8.8 90 186-292 14-106 (273)
180 cd00950 DHDPS Dihydrodipicolin 60.6 1.5E+02 0.0032 28.6 12.0 113 194-306 32-153 (284)
181 COG5016 Pyruvate/oxaloacetate 60.1 2E+02 0.0043 29.1 14.8 141 107-255 13-172 (472)
182 PRK06801 hypothetical protein; 59.6 1.7E+02 0.0037 28.3 11.9 105 180-286 26-131 (286)
183 cd00952 CHBPH_aldolase Trans-o 59.0 1.8E+02 0.004 28.4 12.5 112 194-305 40-161 (309)
184 PRK12857 fructose-1,6-bisphosp 57.3 1.7E+02 0.0037 28.2 11.4 105 181-287 27-132 (284)
185 PRK12738 kbaY tagatose-bisphos 56.6 1.9E+02 0.0042 27.9 12.5 66 185-254 157-227 (286)
186 PRK03170 dihydrodipicolinate s 56.3 2E+02 0.0042 27.9 12.2 112 194-305 33-153 (292)
187 PRK07709 fructose-bisphosphate 55.6 2E+02 0.0044 27.8 12.8 67 184-254 157-228 (285)
188 PRK09195 gatY tagatose-bisphos 54.8 2.1E+02 0.0045 27.7 12.2 67 184-254 156-227 (284)
189 PTZ00372 endonuclease 4-like p 54.5 2.6E+02 0.0056 28.7 14.3 121 153-293 115-241 (413)
190 cd00408 DHDPS-like Dihydrodipi 53.3 2.1E+02 0.0046 27.4 12.6 112 194-305 29-149 (281)
191 PRK08185 hypothetical protein; 53.1 2.2E+02 0.0048 27.5 11.8 105 180-286 21-125 (283)
192 PRK08227 autoinducer 2 aldolas 52.2 2.2E+02 0.0047 27.2 15.4 82 186-292 98-180 (264)
193 PRK07998 gatY putative fructos 52.1 2.2E+02 0.0048 27.4 11.2 104 181-286 27-131 (283)
194 PF01244 Peptidase_M19: Membra 51.9 1.5E+02 0.0033 29.1 10.5 55 359-427 263-318 (320)
195 PF01791 DeoC: DeoC/LacD famil 51.8 2E+02 0.0044 26.7 12.9 101 126-235 20-132 (236)
196 cd00947 TBP_aldolase_IIB Tagat 51.3 2.3E+02 0.005 27.2 12.3 66 185-254 150-221 (276)
197 COG0191 Fba Fructose/tagatose 50.2 2.4E+02 0.0052 27.1 11.7 106 181-288 27-134 (286)
198 PRK15446 phosphonate metabolis 49.0 75 0.0016 32.2 8.1 43 211-257 210-253 (383)
199 cd00947 TBP_aldolase_IIB Tagat 48.7 2.5E+02 0.0055 26.9 12.1 105 181-287 22-127 (276)
200 PRK14042 pyruvate carboxylase 48.6 3.9E+02 0.0083 29.0 20.4 140 107-254 11-169 (596)
201 PRK09282 pyruvate carboxylase 46.8 3.9E+02 0.0084 29.0 13.3 155 127-285 98-255 (592)
202 TIGR01858 tag_bisphos_ald clas 46.7 2.8E+02 0.006 26.8 12.1 66 185-254 155-225 (282)
203 PRK07998 gatY putative fructos 46.2 2.8E+02 0.0061 26.7 11.0 67 184-254 154-224 (283)
204 PRK12737 gatY tagatose-bisphos 46.2 2.8E+02 0.0062 26.8 12.5 66 185-254 157-227 (284)
205 cd01301 rDP_like renal dipepti 46.1 3E+02 0.0065 27.0 17.1 51 359-423 255-306 (309)
206 PRK07709 fructose-bisphosphate 46.0 2.9E+02 0.0062 26.7 11.9 106 180-287 26-135 (285)
207 PRK13352 thiamine biosynthesis 45.9 3.4E+02 0.0074 27.6 15.9 23 128-150 80-102 (431)
208 PRK08610 fructose-bisphosphate 45.7 2.9E+02 0.0063 26.7 11.3 107 180-287 26-135 (286)
209 PRK05835 fructose-bisphosphate 44.8 3.1E+02 0.0067 26.8 11.3 106 180-287 25-132 (307)
210 PRK07084 fructose-bisphosphate 44.5 2.9E+02 0.0064 27.1 10.8 68 219-287 74-143 (321)
211 TIGR00167 cbbA ketose-bisphosp 44.4 3.1E+02 0.0066 26.6 11.3 106 180-287 26-135 (288)
212 PRK06806 fructose-bisphosphate 44.1 3E+02 0.0066 26.5 11.8 111 180-292 26-139 (281)
213 TIGR01235 pyruv_carbox pyruvat 43.9 5E+02 0.011 30.8 14.4 107 129-238 629-742 (1143)
214 TIGR00126 deoC deoxyribose-pho 43.3 2.6E+02 0.0057 25.6 15.5 132 120-290 13-152 (211)
215 cd00953 KDG_aldolase KDG (2-ke 41.8 3.2E+02 0.007 26.2 13.4 107 120-235 15-128 (279)
216 PRK10657 isoaspartyl dipeptida 41.7 3E+02 0.0065 27.7 11.3 86 257-366 161-250 (388)
217 TIGR00587 nfo apurinic endonuc 41.3 3.2E+02 0.007 26.0 11.6 92 185-293 14-111 (274)
218 TIGR03249 KdgD 5-dehydro-4-deo 41.3 3.4E+02 0.0074 26.3 12.4 111 194-305 37-153 (296)
219 PRK12999 pyruvate carboxylase; 41.3 6.2E+02 0.013 30.0 14.7 181 123-306 624-813 (1146)
220 PRK08610 fructose-bisphosphate 41.3 3.4E+02 0.0074 26.3 12.6 67 184-254 157-228 (286)
221 PF02811 PHP: PHP domain; Int 41.2 21 0.00045 31.2 2.4 35 108-145 1-36 (175)
222 PF01116 F_bP_aldolase: Fructo 41.1 1.2E+02 0.0025 29.5 7.6 131 180-312 25-173 (287)
223 PRK06015 keto-hydroxyglutarate 39.8 2.8E+02 0.0061 25.2 9.4 99 122-242 13-111 (201)
224 TIGR00674 dapA dihydrodipicoli 39.8 3.5E+02 0.0076 26.0 12.5 113 194-306 30-151 (285)
225 PRK14040 oxaloacetate decarbox 39.7 5.3E+02 0.011 28.0 14.2 156 127-286 99-257 (593)
226 COG1387 HIS2 Histidinol phosph 39.6 3.2E+02 0.007 25.5 17.2 34 107-144 2-35 (237)
227 COG1830 FbaB DhnA-type fructos 39.4 3.4E+02 0.0073 25.8 9.9 106 184-313 99-208 (265)
228 COG1060 ThiH Thiamine biosynth 39.1 4E+02 0.0087 26.9 11.2 119 121-240 89-229 (370)
229 PRK05835 fructose-bisphosphate 38.7 3.9E+02 0.0084 26.2 12.2 51 185-238 157-214 (307)
230 COG0329 DapA Dihydrodipicolina 37.9 3.9E+02 0.0085 26.0 12.5 123 183-305 25-156 (299)
231 cd00951 KDGDH 5-dehydro-4-deox 37.8 3.8E+02 0.0083 25.8 12.5 111 194-305 32-148 (289)
232 TIGR01182 eda Entner-Doudoroff 36.8 3.3E+02 0.0072 24.8 9.5 99 122-242 17-115 (204)
233 cd00408 DHDPS-like Dihydrodipi 36.8 3.8E+02 0.0083 25.6 11.9 110 120-235 13-130 (281)
234 COG0075 Serine-pyruvate aminot 36.6 4.1E+02 0.0088 27.0 10.8 97 185-312 92-188 (383)
235 TIGR00284 dihydropteroate synt 36.3 5.4E+02 0.012 27.2 12.8 118 183-316 166-289 (499)
236 PRK07535 methyltetrahydrofolat 36.1 3.9E+02 0.0084 25.4 13.1 121 185-316 28-163 (261)
237 cd00019 AP2Ec AP endonuclease 35.6 3.9E+02 0.0086 25.4 11.4 93 185-293 12-108 (279)
238 COG2089 SpsE Sialic acid synth 35.2 4.5E+02 0.0097 25.9 10.8 30 212-241 87-116 (347)
239 TIGR01108 oadA oxaloacetate de 34.2 6.3E+02 0.014 27.3 14.4 175 127-305 93-270 (582)
240 PLN02417 dihydrodipicolinate s 33.9 4.3E+02 0.0094 25.3 12.5 112 120-235 17-132 (280)
241 PF01261 AP_endonuc_2: Xylose 33.7 1.5E+02 0.0032 26.5 6.9 103 190-316 2-134 (213)
242 TIGR00190 thiC thiamine biosyn 33.6 5.3E+02 0.011 26.2 16.7 23 128-150 80-102 (423)
243 cd00950 DHDPS Dihydrodipicolin 33.6 4.3E+02 0.0094 25.3 11.7 110 120-235 16-133 (284)
244 COG2108 Uncharacterized conser 32.9 3.5E+02 0.0076 26.6 9.1 89 108-202 109-198 (353)
245 PF01081 Aldolase: KDPG and KH 32.8 3.8E+02 0.0082 24.3 11.0 100 122-243 17-116 (196)
246 PF07071 DUF1341: Protein of u 32.6 2.7E+02 0.0058 25.2 7.7 75 186-293 138-212 (218)
247 TIGR02318 phosphono_phnM phosp 32.4 1.7E+02 0.0037 29.6 7.7 41 213-257 207-248 (376)
248 PRK09856 fructoselysine 3-epim 32.2 4.4E+02 0.0095 24.9 13.8 118 186-315 16-150 (275)
249 TIGR00683 nanA N-acetylneurami 31.6 4.8E+02 0.01 25.2 12.5 112 194-305 32-154 (290)
250 PF01964 ThiC: ThiC family; I 31.3 4.5E+02 0.0097 26.7 9.8 144 129-290 80-262 (420)
251 TIGR00674 dapA dihydrodipicoli 31.0 4.8E+02 0.011 25.0 11.8 110 120-235 14-131 (285)
252 PF00701 DHDPS: Dihydrodipicol 30.8 4.9E+02 0.011 25.0 12.9 111 120-236 17-135 (289)
253 PRK03170 dihydrodipicolinate s 30.7 5E+02 0.011 25.0 11.6 110 120-235 17-134 (292)
254 COG4939 Major membrane immunog 30.4 1.7E+02 0.0037 24.1 5.6 16 70-85 49-64 (147)
255 cd00952 CHBPH_aldolase Trans-o 30.4 5.2E+02 0.011 25.2 12.8 109 120-235 24-142 (309)
256 COG1242 Predicted Fe-S oxidore 30.4 5E+02 0.011 25.0 13.2 24 213-236 166-189 (312)
257 PRK09196 fructose-1,6-bisphosp 30.3 5.6E+02 0.012 25.5 11.6 106 180-287 26-140 (347)
258 PRK08508 biotin synthase; Prov 30.3 5E+02 0.011 24.9 14.1 116 194-309 54-181 (279)
259 TIGR01856 hisJ_fam histidinol 30.3 4.7E+02 0.01 24.6 19.2 33 108-143 1-33 (253)
260 PRK03892 ribonuclease P protei 30.2 4.3E+02 0.0093 24.1 16.5 53 355-428 162-214 (216)
261 PF10055 DUF2292: Uncharacteri 29.4 59 0.0013 20.6 2.3 16 71-86 18-33 (38)
262 TIGR01949 AroFGH_arch predicte 29.3 4.9E+02 0.011 24.5 10.8 161 122-312 33-197 (258)
263 TIGR01521 FruBisAldo_II_B fruc 29.0 5.9E+02 0.013 25.4 11.3 105 180-286 24-137 (347)
264 cd01733 LSm10 The eukaryotic S 28.8 1.2E+02 0.0027 22.7 4.4 32 52-83 42-75 (78)
265 PRK09250 fructose-bisphosphate 28.6 2.4E+02 0.0052 28.0 7.5 89 185-293 149-240 (348)
266 cd08205 RuBisCO_IV_RLP Ribulos 28.6 5E+02 0.011 26.1 10.1 109 121-238 142-257 (367)
267 TIGR00167 cbbA ketose-bisphosp 28.4 5.5E+02 0.012 24.8 11.7 66 185-254 160-231 (288)
268 PRK15452 putative protease; Pr 28.4 4.3E+02 0.0093 27.4 9.7 50 185-235 13-66 (443)
269 cd07937 DRE_TIM_PC_TC_5S Pyruv 28.2 5.4E+02 0.012 24.6 13.7 107 128-239 94-203 (275)
270 PF03932 CutC: CutC family; I 28.1 4.6E+02 0.01 23.8 11.0 66 187-256 77-144 (201)
271 PRK07315 fructose-bisphosphate 28.0 5.7E+02 0.012 24.8 11.3 104 180-286 26-133 (293)
272 PRK12857 fructose-1,6-bisphosp 28.0 5.6E+02 0.012 24.8 12.3 66 185-254 157-227 (284)
273 PF00701 DHDPS: Dihydrodipicol 27.6 5.6E+02 0.012 24.6 12.0 113 194-306 33-154 (289)
274 PRK09248 putative hydrolase; V 27.3 5.1E+02 0.011 24.1 17.1 35 107-144 4-38 (246)
275 PRK03620 5-dehydro-4-deoxygluc 27.3 5.9E+02 0.013 24.8 14.3 111 194-304 39-154 (303)
276 PRK07226 fructose-bisphosphate 27.2 5.5E+02 0.012 24.4 15.5 159 122-312 36-201 (267)
277 COG0800 Eda 2-keto-3-deoxy-6-p 27.0 4.3E+02 0.0093 24.2 8.2 98 122-241 22-119 (211)
278 cd00951 KDGDH 5-dehydro-4-deox 26.8 5.8E+02 0.013 24.6 12.6 109 120-235 16-132 (289)
279 PF14871 GHL6: Hypothetical gl 26.8 2.1E+02 0.0046 23.9 6.0 47 190-236 7-65 (132)
280 PF03102 NeuB: NeuB family; I 26.5 3.5E+02 0.0077 25.4 8.0 70 211-291 52-121 (241)
281 cd00959 DeoC 2-deoxyribose-5-p 26.4 4.4E+02 0.0096 23.8 8.6 101 122-225 66-172 (203)
282 PF07287 DUF1446: Protein of u 26.4 5.2E+02 0.011 26.0 9.6 111 214-366 57-167 (362)
283 PF15581 Imm35: Immunity prote 26.3 1.8E+02 0.0039 22.2 4.7 38 406-448 42-79 (93)
284 PLN02858 fructose-bisphosphate 26.1 6.8E+02 0.015 30.4 12.0 106 180-287 1122-1227(1378)
285 PRK04208 rbcL ribulose bisopho 26.0 7.6E+02 0.016 25.9 10.9 112 122-239 173-292 (468)
286 cd00954 NAL N-Acetylneuraminic 25.6 6.1E+02 0.013 24.4 12.7 112 194-305 32-154 (288)
287 TIGR02313 HpaI-NOT-DapA 2,4-di 25.4 6.2E+02 0.014 24.4 14.9 112 194-305 32-153 (294)
288 cd01308 Isoaspartyl-dipeptidas 25.2 7.1E+02 0.015 25.0 14.7 62 258-320 160-225 (387)
289 TIGR03581 EF_0839 conserved hy 25.1 4.9E+02 0.011 24.0 8.1 73 188-293 140-212 (236)
290 COG2108 Uncharacterized conser 25.1 5.5E+02 0.012 25.3 8.9 75 212-287 91-168 (353)
291 KOG4127 Renal dipeptidase [Pos 25.0 7E+02 0.015 24.9 9.9 44 384-429 347-390 (419)
292 PRK03620 5-dehydro-4-deoxygluc 25.0 6.4E+02 0.014 24.5 11.2 109 120-235 23-139 (303)
293 PF12690 BsuPI: Intracellular 24.8 57 0.0012 24.7 2.0 14 437-450 21-34 (82)
294 PRK04147 N-acetylneuraminate l 24.5 6.4E+02 0.014 24.3 12.4 111 195-305 37-156 (293)
295 cd00945 Aldolase_Class_I Class 24.4 4.9E+02 0.011 22.9 13.0 105 123-236 11-121 (201)
296 PRK08444 hypothetical protein; 24.4 7.2E+02 0.016 24.9 10.9 131 122-252 80-231 (353)
297 TIGR03249 KdgD 5-dehydro-4-deo 24.0 6.6E+02 0.014 24.3 11.4 109 120-235 21-137 (296)
298 TIGR01302 IMP_dehydrog inosine 23.9 8.3E+02 0.018 25.4 11.5 95 130-233 228-332 (450)
299 TIGR03326 rubisco_III ribulose 23.8 8E+02 0.017 25.2 11.0 112 122-239 157-275 (412)
300 PRK07807 inosine 5-monophospha 23.6 5.9E+02 0.013 26.8 9.8 99 127-234 228-336 (479)
301 COG0269 SgbH 3-hexulose-6-phos 23.4 5.9E+02 0.013 23.4 10.3 64 190-259 74-137 (217)
302 PF02679 ComA: (2R)-phospho-3- 23.3 6.3E+02 0.014 23.8 10.5 93 196-315 37-134 (244)
303 TIGR03569 NeuB_NnaB N-acetylne 22.7 4.3E+02 0.0093 26.2 8.2 86 212-308 73-160 (329)
304 cd00453 FTBP_aldolase_II Fruct 22.7 7.6E+02 0.017 24.5 11.8 73 214-287 70-156 (340)
305 KOG0369 Pyruvate carboxylase [ 22.5 6.4E+02 0.014 27.5 9.4 178 214-429 42-226 (1176)
306 smart00481 POLIIIAc DNA polyme 22.5 97 0.0021 22.1 2.8 32 109-143 1-33 (67)
307 COG0135 TrpF Phosphoribosylant 22.4 6E+02 0.013 23.2 14.9 89 186-311 13-102 (208)
308 cd01721 Sm_D3 The eukaryotic S 22.1 2.1E+02 0.0044 20.9 4.5 31 53-83 34-66 (70)
309 cd08213 RuBisCO_large_III Ribu 21.8 7.9E+02 0.017 25.2 10.0 112 122-239 144-262 (412)
310 KOG4549 Magnesium-dependent ph 21.6 2.1E+02 0.0046 23.7 4.7 55 92-147 6-69 (144)
311 TIGR03849 arch_ComA phosphosul 21.5 6.8E+02 0.015 23.4 11.2 93 196-315 24-121 (237)
312 PF07172 GRP: Glycine rich pro 21.5 76 0.0017 24.9 2.2 6 5-10 1-6 (95)
313 CHL00040 rbcL ribulose-1,5-bis 21.2 7.9E+02 0.017 25.8 9.9 111 122-238 180-298 (475)
314 PRK13399 fructose-1,6-bisphosp 20.9 8.4E+02 0.018 24.3 11.5 106 180-287 26-140 (347)
315 COG0413 PanB Ketopantoate hydr 20.9 3.7E+02 0.008 25.5 6.7 46 181-235 92-137 (268)
316 PRK05301 pyrroloquinoline quin 20.8 8.4E+02 0.018 24.5 10.3 42 269-310 140-185 (378)
317 cd00953 KDG_aldolase KDG (2-ke 20.8 7.5E+02 0.016 23.7 14.2 111 194-306 31-148 (279)
318 TIGR02109 PQQ_syn_pqqE coenzym 20.6 8.4E+02 0.018 24.2 10.2 41 269-309 131-175 (358)
319 PF04131 NanE: Putative N-acet 20.4 6.4E+02 0.014 22.7 10.0 157 130-310 4-169 (192)
320 TIGR02313 HpaI-NOT-DapA 2,4-di 20.2 7.9E+02 0.017 23.7 11.9 110 120-235 16-134 (294)
321 cd08210 RLP_RrRLP Ribulose bis 20.2 8.9E+02 0.019 24.4 10.4 108 122-238 138-253 (364)
322 COG1038 PycA Pyruvate carboxyl 20.2 3.8E+02 0.0082 29.9 7.5 178 214-429 16-200 (1149)
No 1
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=1.4e-66 Score=539.64 Aligned_cols=482 Identities=85% Similarity=1.332 Sum_probs=424.8
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+.+++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+..+....+++.++.
T Consensus 4 ~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s 83 (486)
T PLN02942 4 STKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFFSGQ 83 (486)
T ss_pred CCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCCCCCeEEECCCCEEecCEeeeeeccCcccCCCcccchHHHHH
Confidence 56799999999997766778999999999999876433335789999999999999999999988754556789999999
Q ss_pred HHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 132 AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
++++.+||||++||..+......+.++.......+..++++++........+...++..+.+..|+..+|+|+.+++...
T Consensus 84 ~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~~~~~~~~~ 163 (486)
T PLN02942 84 AAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFFMAYKGSLM 163 (486)
T ss_pred HHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEEEecCCCCC
Confidence 99999999999999765544446666665555555667887776555444444567777765678889999988877667
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.+.+.++.++++|..+++|+++........+.....|..++..|...+|..+|..++.+++.++...+.++|+.|+
T Consensus 164 ~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~ 243 (486)
T PLN02942 164 VTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHV 243 (486)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 78999999999999999999999998877777777777788888888888899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
++....+.++.+++.|+.|++++++|++.++++.+...++..++.++++||+|...+++.++++++.|+++++||||.|+
T Consensus 244 s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~ 323 (486)
T PLN02942 244 MSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPF 323 (486)
T ss_pred CCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCC
Confidence 99999899999999999999999999999999887655555668899999999999999999999999999999999999
Q ss_pred ChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
+...++++.++|+.++.|+++++..++..+++++..+.++++++++++|.|||+++|+.+++|+|++|+.||||++|++.
T Consensus 324 ~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~ 403 (486)
T PLN02942 324 NSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNS 403 (486)
T ss_pred ChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCc
Confidence 99888876668999999999999999988877787878999999999999999999997778999999999999999999
Q ss_pred ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCccccccchhhhHHHhhhccccc
Q 009282 452 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKADAKYLSSLQAPV 531 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (538)
.+.++...+.++..|+||+|..+.++|..||++|++||++|+++...+.|+++++..++++|.+..+.|+.|+++|++|+
T Consensus 404 ~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (486)
T PLN02942 404 TFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWENGELKVVRGSGRYIEMPPFSYLFDGIQKADAAYLSSLRAPV 483 (486)
T ss_pred cEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEECCEEeccCCCceEecCCCcccccccccccccccCccccccc
Confidence 99999888889999999999999999999999999999999999888899999998776688888999999999999999
Q ss_pred cc
Q 009282 532 KR 533 (538)
Q Consensus 532 ~~ 533 (538)
|+
T Consensus 484 ~~ 485 (486)
T PLN02942 484 KR 485 (486)
T ss_pred cc
Confidence 87
No 2
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.3e-64 Score=474.78 Aligned_cols=483 Identities=55% Similarity=0.906 Sum_probs=458.0
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
...++|+|++|++.+.....||+++||.|.+|+++..++.+.++||++|++|+||.||.|+|+-.+++|..+.+++.++.
T Consensus 13 s~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ipgg~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~DdF~~GT 92 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIPGGVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDDFFQGT 92 (522)
T ss_pred ccceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcCCCceEEecCCcEEecCccCccceeccccCCccchhhhhccc
Confidence 45689999999999988999999999999999999988989999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
+++++.|+|+++|+..+... .+.+.++.+.+.+. ...++++++..++.|.....+++.-+.++.|++.|++|+.|.+.
T Consensus 93 kAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~fmayk~~ 172 (522)
T KOG2584|consen 93 KAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFFMAYKDL 172 (522)
T ss_pred HHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEeeeeeccc
Confidence 99999999999999877764 78888888888875 68999999999999999999999999989999999999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
++++++++.+.+..+++.|....+|+++.+.+.+..+.+.+.|++++++|...||...|.+++.+++.++...+.+++++
T Consensus 173 ~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvv 252 (522)
T KOG2584|consen 173 YMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVV 252 (522)
T ss_pred cccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcc-cHHHHHHHHhcCCceEEeCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG-HNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~-~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
|..+....+.|.+++++|..|..++....+..+...+++.+|..+..+.+.||+|... ....++++|..|..-..||||
T Consensus 253 hVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdh 332 (522)
T KOG2584|consen 253 HVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDH 332 (522)
T ss_pred EEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCC
Confidence 9999988899999999999999999999999999999999999999999999999887 789999999999999999999
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
++++..+|.++.+.|...|.|++|.+.++++.|.+.+..|.|++.+-+.-.+.|+|+++++.+++|+|++|.+||+||||
T Consensus 333 ctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwd 412 (522)
T KOG2584|consen 333 CTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWD 412 (522)
T ss_pred CCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhheeccCcCceecccCCCcEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc-cccccchhhh--HHHhh
Q 009282 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN-YLFHGLDKAD--AKYLS 525 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~ 525 (538)
++...+|++........++.|+|+...+.+.-|+.+||+||++|.+....+.||++++.+++ .++.+++++| ..+..
T Consensus 413 p~at~tIS~~th~~~~d~NifEGm~~~G~plvtIsrGriv~eng~~~v~~g~G~fip~~~f~~~vy~~i~~r~~~~~~~~ 492 (522)
T KOG2584|consen 413 PNATKTISAKTHHSANDFNIFEGMTVHGVPLVTISRGRVVYENGNLVVTEGSGRFIPRSPFPDYVYKRIKARDKTAELRG 492 (522)
T ss_pred CCcceEeccccccccccceeecCcEecceeEEEEeCCeEEEecCcEEEecCCCceeeCCCCcHHHHHHHHhhhccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999 5999999998 66667
Q ss_pred hcccccccc
Q 009282 526 SLQAPVKRL 534 (538)
Q Consensus 526 ~~~~~~~~~ 534 (538)
..|.|.+.+
T Consensus 493 v~r~~y~~~ 501 (522)
T KOG2584|consen 493 VPRGPYDGP 501 (522)
T ss_pred ccccccCCc
Confidence 777766543
No 3
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=3.4e-58 Score=474.72 Aligned_cols=454 Identities=37% Similarity=0.614 Sum_probs=386.2
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccccc-CCCCChhhHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFSG 130 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~-~~~~~~~~~~~~ 130 (538)
+++++|+|++|++++...+++|+|+||+|++|++.. +.+.++||++|++|+|||||+|+|+..+. .+....+++...
T Consensus 3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~ 80 (477)
T PRK13404 3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--GPGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDFYTG 80 (477)
T ss_pred CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--CCCCeEEECCCCEEecCEEEeEEcCCccccCCccccchHHHH
Confidence 457899999999987666789999999999998753 34578999999999999999999997641 134456888899
Q ss_pred HHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhH-HHHHHHHHHcCCcEEEEEeeeC
Q 009282 131 QAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVS-DEMEVMVKEKGINSFKFFMAYK 207 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ik~~~~~~ 207 (538)
.+.++.+||||++++..... ....+.++...... ....++++++........+.. +++..+. +.|+..+|+|.++.
T Consensus 81 s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~-~~G~~~iKi~~~~~ 159 (477)
T PRK13404 81 TVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALI-AQGYTSFKVFMTYD 159 (477)
T ss_pred HHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHH-HcCCCEEEEEecCC
Confidence 99999999999999864322 25566666665544 335778887766654444433 5777776 78999999998654
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 208 ~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
+ ...+.+.+.++++.|+++|.++..|+++...+....+.+...|......|...+|...|...+.+++.+++..+.++|
T Consensus 160 ~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~h 238 (477)
T PRK13404 160 D-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPIL 238 (477)
T ss_pred C-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 3 456889999999999999999999999887766666677788988888888899999999999999999999999999
Q ss_pred EEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCC
Q 009282 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (538)
Q Consensus 288 ~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD 367 (538)
+.|+++....+.++.+++.|+.+++++++|++.++++.+..... .+..++++||+|...+++++|+++..|..++++||
T Consensus 239 i~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~-~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sD 317 (477)
T PRK13404 239 IVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGM-EGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSD 317 (477)
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccc-cCCceEECCCCCChHHHHHHHHHHhCCCceEEecC
Confidence 99999999999999999999999999999999999987743211 24789999999999999999999999999999999
Q ss_pred CCCCChhhhh---c-C-ccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCc
Q 009282 368 HCAFNSTQKA---F-G-IDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDA 442 (538)
Q Consensus 368 ~~~~~~~~~~---~-~-~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~A 442 (538)
|.|++..+|. + . ..+|+.+|.|++|++..++.+++.++..+++|++++++++|.|||++||+.+++|+|++|+.|
T Consensus 318 Hap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~A 397 (477)
T PRK13404 318 HAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADA 397 (477)
T ss_pred CCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcC
Confidence 9999865441 1 1 136888999999999999999988887778999999999999999999997678999999999
Q ss_pred cEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc
Q 009282 443 DIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 510 (538)
Q Consensus 443 Dlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~ 510 (538)
|||++|.+..+.++.+.+.+...|+||+|..+.++|..||++|++||++|+++...+.|+++++.+..
T Consensus 398 Dlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~vv~~~g~~~~~~~~G~~~~~~~~~ 465 (477)
T PRK13404 398 DIAIWDPDREVTITNADLHHAADYTPYEGMRVTGWPVTVLSRGRVVVEDGELVAERGSGQFLARSLPD 465 (477)
T ss_pred CEEEEcCCccEEEchHHhcccCCCCcccceEEeeeEEEEEECCEEEEECCEEecCCCceeEecCCCcc
Confidence 99999999999999988999999999999999999999999999999999999877789999975433
No 4
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=4.5e-58 Score=477.13 Aligned_cols=451 Identities=53% Similarity=0.821 Sum_probs=383.5
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (538)
++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+..+..+++++....+++
T Consensus 1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a 80 (454)
T TIGR02033 1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPPDAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAA 80 (454)
T ss_pred CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHHHHH
Confidence 37999999998877789999999999999975433334689999999999999999999987644456788898889999
Q ss_pred HhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccC
Q 009282 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (538)
Q Consensus 135 l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (538)
+++||||++||....+. ...+.++....... ...++++++......+.+...+......+.|+..+|+++++++.+..
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 160 (454)
T TIGR02033 81 AAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAYKNLLMV 160 (454)
T ss_pred HhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeecCCCCCC
Confidence 99999999998755432 45566665554443 24566666655444444445553333336789999999988777788
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.+.+++.++.|+++|.++++|+++........+.+.+.|......|...+|...+...+.+++.++...+.+++++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s 240 (454)
T TIGR02033 161 DDEELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVS 240 (454)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 99999999999999999999999887777667777778899888899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCC
Q 009282 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (538)
Q Consensus 293 ~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~ 372 (538)
+...++.++.+++.|+.++++.++|++.++.+.+...++.. ..++++||+|...+++.++++++.|+.+++||||.|++
T Consensus 241 ~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~-~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~ 319 (454)
T TIGR02033 241 TASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEG-AKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFN 319 (454)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCccccc-ceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCC
Confidence 98878999999999999999999999999988775444433 56789999999999999999999999999999999998
Q ss_pred hhhhh-cCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 373 STQKA-FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 373 ~~~~~-~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
...+. ...++|+..|+|++|+++.++.++++++..+.++++++++++|.|||++||+.+++|+|++|+.||||++|.+.
T Consensus 320 ~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~ 399 (454)
T TIGR02033 320 FAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNR 399 (454)
T ss_pred HHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCc
Confidence 77652 22347888999999999999999988887788999999999999999999997678999999999999999999
Q ss_pred ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeec
Q 009282 452 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 506 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~ 506 (538)
.+.++.+++.+...|+||.|....++|..||++|++||++|+++...+.|+++++
T Consensus 400 ~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~g~~~~~ 454 (454)
T TIGR02033 400 TTVISAETHHDNADYNPFEGFKVQGAVVSVLSRGRVVVEDGQFVGTAGSGRFIKR 454 (454)
T ss_pred CeeechHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEecCCCCcceecC
Confidence 9999988888999999999998899999999999999999999987777999873
No 5
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=1.3e-57 Score=473.77 Aligned_cols=452 Identities=51% Similarity=0.813 Sum_probs=390.1
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|++|++++...+++|+|+||||++|++. .+.++||++|++|+|||||+|+|+..++.+....+++....+.
T Consensus 2 d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~----~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 77 (459)
T PRK08323 2 STLIKNGTVVTADDTYKADVLIEDGKIAAIGAN----LGDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFETGTRA 77 (459)
T ss_pred cEEEECCEEEcCCCceEEEEEEECCEEEEEecC----CCceEEECCCCEEeccEEeeeeccccccCCccccCcHHHHHHH
Confidence 589999999998877789999999999999875 2468999999999999999999997654444567888888899
Q ss_pred HHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
++++||||++|+....+. ...+.++....... ...++++++......+.+.++++..+. +.|...+|+++++++.+.
T Consensus 78 a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~ 156 (459)
T PRK08323 78 AACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELV-EEGITSFKLFMAYKGALM 156 (459)
T ss_pred HHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHH-HcCCCEEEEEEecCCCCC
Confidence 999999999998654432 45566665555432 356777766554444555677787777 678899999988877778
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.++++++.|+++|.++++|+++........+.+.+.|......|...+|...+...+.++++++...+.++++.|+
T Consensus 157 ~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~ 236 (459)
T PRK08323 157 LDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHV 236 (459)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 89999999999999999999999988777766666767778887777888899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
++....+.++.+++.|+.|+++.++|++.++.+.+...++..+..++++||+|...+.+++++++++|+.++++|||.|+
T Consensus 237 s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~ 316 (459)
T PRK08323 237 SCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPF 316 (459)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCC
Confidence 99988899999999999999999999999998877544332356789999999999999999999999999999999999
Q ss_pred Chhhhhc-CccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCC
Q 009282 372 NSTQKAF-GIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 450 (538)
Q Consensus 372 ~~~~~~~-~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~ 450 (538)
+...+++ +.++|+..|+|+++.+..++.+++..+..+.++++++++++|.|||++||+.+++|+|++|+.|||||+|.+
T Consensus 317 ~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~ 396 (459)
T PRK08323 317 CFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPN 396 (459)
T ss_pred ChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCC
Confidence 8877763 345788999999999999999997777777899999999999999999999777899999999999999999
Q ss_pred CceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc
Q 009282 451 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 510 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~ 510 (538)
..+.++.+++.+...++||+|..+.++|..||++|++||++|+++...+.|++++++.++
T Consensus 397 ~~~~v~~~~~~s~~~~s~~~g~~~~g~v~~viv~G~~v~~~g~~~~~~~~G~~~~~~~~~ 456 (459)
T PRK08323 397 ATKTISASTLHSNVDYNPYEGFEVTGWPVTTLSRGEVVVEDGEFRGKAGHGRFLKRKPFQ 456 (459)
T ss_pred cccccCHHHHhhcCCCCcccCcEEeeeEEEEEECCEEEEECCEEeccCCCceEeeCCCCC
Confidence 999999988999999999999988899999999999999999999877789999987554
No 6
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=2.6e-57 Score=469.66 Aligned_cols=445 Identities=54% Similarity=0.862 Sum_probs=381.8
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (538)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+........++++++...+.+
T Consensus 1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a 80 (447)
T cd01314 1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGTRAA 80 (447)
T ss_pred CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCCCCceEEECCCCEEecCEEeccccccccccCccCcchHHHHHHHH
Confidence 47999999998877789999999999999976433334689999999999999999999987633346788898899999
Q ss_pred HhCCcEEEecccCCCC-CCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccC
Q 009282 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (538)
Q Consensus 135 l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (538)
+++||||++||....+ ....+.++...... ....++++++........+.++++..+. +.|...+|+++.+++.+.+
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~-~~g~~~ik~~~~~~~~~~~ 159 (447)
T cd01314 81 AAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELV-KKGISSFKVFMAYKGLLMV 159 (447)
T ss_pred HhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHH-HcCCCEEEEEeccCCCCCC
Confidence 9999999999975433 34556666554433 2356666666554444455677777777 4788899999888777788
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.+.++++++.|+++|.++++|+++........+.+...|......|...+|...+...+.+++.++...+.++++.|++
T Consensus 160 s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s 239 (447)
T cd01314 160 DDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVS 239 (447)
T ss_pred CHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999888777777776667788888888888999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCC
Q 009282 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (538)
Q Consensus 293 ~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~ 372 (538)
+....+.++.+++.|+.++++.++|++.++.+.+.... ..+..++++||+|...+++++++++++|+.+++|||+.|++
T Consensus 240 ~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~-~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~ 318 (447)
T cd01314 240 SKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDW-FEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFN 318 (447)
T ss_pred CHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhcccc-ccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 99888899999999999999999999999988764211 12467899999999999999999999999999999999999
Q ss_pred hhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCc
Q 009282 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 452 (538)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~ 452 (538)
...+++...+|+.+|+|++|+++.++.++.+++..+.++++++++++|.|||++||+.+++|+|++|+.|||||+|.+..
T Consensus 319 ~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~ 398 (447)
T cd01314 319 FAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAE 398 (447)
T ss_pred HHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcC
Confidence 98888765689999999999999999999888877789999999999999999999978899999999999999999999
Q ss_pred eeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCc
Q 009282 453 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSG 501 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~ 501 (538)
+.++.+++.+...++||.|..+.++|..||++|++||++|+++..++.|
T Consensus 399 ~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~~~~~~~~~~g 447 (447)
T cd01314 399 KTISADTHHHNVDYNIFEGMKVKGWPVVTISRGKVVVEDGELVGEKGSG 447 (447)
T ss_pred EEecHHHhhccCCCCcccCeEEeeeEEEEEECCEEEEECCEEeccCCCC
Confidence 9999888888999999999998899999999999999999999876544
No 7
>PLN02795 allantoinase
Probab=100.00 E-value=7.9e-56 Score=458.55 Aligned_cols=449 Identities=24% Similarity=0.321 Sum_probs=370.5
Q ss_pred cccccCcccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCC---CCceEEecCCCeeeccccccccccccccCCCC
Q 009282 46 QCGIQSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE 122 (538)
Q Consensus 46 ~~~~~~~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~ 122 (538)
.|...++.+++|+|++|+++++...++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+... +..
T Consensus 37 ~~~~~~~~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~--~~~ 114 (505)
T PLN02795 37 RCSLLPWPHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEAPKSQKKPHVLDYGNAVVMPGLIDVHVHLNEP--GRT 114 (505)
T ss_pred ccccccccceEEECCEEEECCCeEEEEEEEECCEEEEecCccccccccCCCEEEECCCCEEecCEEecccCcCCC--Ccc
Confidence 343444569999999999987777899999999999999754321 256899999999999999999999775 455
Q ss_pred ChhhHHHHHHHHHhCCcEEEecccC--CCCCCHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 123 TIDDFFSGQAAALAGGTTMHIDFVI--PINGSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTt~~d~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
.++++....++++++||||++||.. .+.....+.++...+... ...++++++........+..+++.++. +.|+.+
T Consensus 115 ~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~l~~~~-~~G~~g 193 (505)
T PLN02795 115 EWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPENAHNASVLEELL-DAGALG 193 (505)
T ss_pred chhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCceeeeeceecccCcchhHHHHHHHHH-HCCCcE
Confidence 6788999999999999999999962 222245555555555543 356777766544333334556666665 678988
Q ss_pred EEEEeeeCCCc---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHH
Q 009282 200 FKFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (538)
Q Consensus 200 ik~~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l 276 (538)
+|+|+.+++.. ..+.+.+.++++.++++|.++++|+++........ ....+...+..|...+|..+|...+.+++
T Consensus 194 ~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~--~~~~~~~~~~~~~~~rP~~aE~~ai~~~~ 271 (505)
T PLN02795 194 LKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDS--RLDADPRSYSTYLKSRPPSWEQEAIRQLL 271 (505)
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhhh--hhhcCCcChhHhcccCCHHHHHHHHHHHH
Confidence 99987654433 56789999999999999999999999876443221 11233334445566789999999999999
Q ss_pred HHHHHc-------CCCEEEEeccCH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCccc
Q 009282 277 RLAEFV-------NTPLYVVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGH 348 (538)
Q Consensus 277 ~~~~~~-------~~~~~~~h~~~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 348 (538)
.++... +.++|+.|.++. ...+.++.+++.|+.|++++++||+.++++.+.. .+..++++||+|...+
T Consensus 272 ~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~d 347 (505)
T PLN02795 272 EVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPD----GDTRYKCAPPIRDAAN 347 (505)
T ss_pred HHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHccC----CCCceEEcCCCCChHH
Confidence 999999 999999999998 8889999999999999999999999999887643 2478999999999999
Q ss_pred HHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 349 NKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 349 ~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
++.+|++++.|...+++|||.|++...|+.....|+.++.|++|++..++..+..++ .+++|++++++++|.|||+++|
T Consensus 348 ~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~~-~~~l~l~~~v~~~s~~pA~~~g 426 (505)
T PLN02795 348 RELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAGR-AYGLTLEQLARWWSERPAKLAG 426 (505)
T ss_pred HHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999998876556799999999999999999986665 4559999999999999999999
Q ss_pred CCCCCcccccCCCccEEEEcCCCceeeccCc-ccCCCC-CCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeec
Q 009282 429 VYPRKGAILVGSDADIIIFNPNSSFEITARS-HHSRLD-TNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 506 (538)
Q Consensus 429 ~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~ 506 (538)
+ +++|+|++|+.|||||+|.+..+.++... ..+... |+||+|+.+.++|.+|+++|++||++|+++ .+..|+++..
T Consensus 427 l-~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v~~tiv~G~~v~~~g~~~-~~~~G~~~~~ 504 (505)
T PLN02795 427 L-DSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKVIATFVRGNLVFLEGKHA-KQACGSPILA 504 (505)
T ss_pred C-CCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEEEEEEECCEEEEECCeEc-CCCCCeEecC
Confidence 9 67899999999999999999999998764 567776 999999999999999999999999999998 4557888763
No 8
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=1e-55 Score=442.21 Aligned_cols=425 Identities=31% Similarity=0.502 Sum_probs=376.3
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|+++++++....++|+|+||+|++|+.......+.++||++|++|+|||||.|+|+..+ |....|++.++.++
T Consensus 2 ~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~~~~~iiD~~g~~v~PG~ID~HVH~rep--g~~~ke~~~tgs~A 79 (430)
T COG0044 2 DLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPTSGAEIIDAKGLLVLPGLVDLHVHFREP--GFEHKETFETGSRA 79 (430)
T ss_pred cEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCCCCCcEEECCCCEEccCeeEEEEecCCC--CcchhhhHHHHHHH
Confidence 5799999999996668999999999999999864433578999999999999999999999999 88999999999999
Q ss_pred HHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
++++||||++||....+. ...+.++....... ...+++.++...+..+......+.... ..++|.|.+..+ ..
T Consensus 80 Aa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~~~~~~~----~~g~~~F~~~~~-~~ 154 (430)
T COG0044 80 AAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLELTERGV----EAGFKGFMDDST-GA 154 (430)
T ss_pred HHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhhhhhhhh----ccceEEEecCCc-Cc
Confidence 999999999999755544 56677777776665 689999999988877654332222211 456677777644 55
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.+++.++.+...|..+..|+++..... ......|......|...+|..+|...+.+.++++...|.++|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~---~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~Hi 231 (430)
T COG0044 155 LDDDVLEEALEYAAELGALILVHAEDDDLIA---EGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHI 231 (430)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEecCChhHhh---hHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEc
Confidence 6899999999999999999999999886544 3345578777778888899999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
++....+.++..+..|++|++++++||+.++++.+.. .+..++++||+|..++++.+++.++.|..++++|||+|+
T Consensus 232 St~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~----~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPh 307 (430)
T COG0044 232 STKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED----LGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPH 307 (430)
T ss_pred CCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhc----cCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCC
Confidence 9999999999999999999999999999999988865 457899999999999999999999999999999999999
Q ss_pred ChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
+..+|.. +|..+|+|+.|++..++..+. ++..+.+|+.+.+++.|.|||++||+.. .|.|++|+.|||+|+|.+.
T Consensus 308 t~eeK~~---~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~ 382 (430)
T COG0044 308 TLEEKRL---PFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDE 382 (430)
T ss_pred CHHHhcc---chhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCC
Confidence 9999874 599999999999999999996 9999999999999999999999999955 7889999999999999999
Q ss_pred ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 452 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
.+.+..+.+.++..|+||+|..+.+.|.+|+++|++||++++....
T Consensus 383 ~~~i~~~~~~sk~~~sPf~G~~~~g~v~~Ti~rG~~v~~~~~~~~~ 428 (430)
T COG0044 383 EWTIRAEELYSKAKNSPFEGFELKGRVVATILRGKVVYEDGEVIAK 428 (430)
T ss_pred CeEEchhhhccccCCCCcCCCEEeeeEEEEEECCEEEEECCcEecC
Confidence 9999999999999999999999999999999999999999987654
No 9
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=1.2e-54 Score=447.56 Aligned_cols=442 Identities=27% Similarity=0.393 Sum_probs=372.2
Q ss_pred CcccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHH
Q 009282 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~ 130 (538)
|+++++|+|++|+++++...++|+|+||+|++|++.... ++.++||++|++|+|||||+|+|+..+ +....+++...
T Consensus 1 ~~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~~-~~~~~iD~~g~~vlPG~ID~H~H~~~~--~~~~~~~~~~~ 77 (451)
T PRK06189 1 MMYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEISS-PAREIIDADGLYVFPGMIDVHVHFNEP--GRTHWEGFATG 77 (451)
T ss_pred CCccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCCC-CCCeEEECCCCEEecCEEEeeeccCCC--CCCCcccHHHH
Confidence 356799999999998877789999999999999876432 357899999999999999999999876 55567888888
Q ss_pred HHHHHhCCcEEEecccCCC--CCCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeC
Q 009282 131 QAAALAGGTTMHIDFVIPI--NGSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~ 207 (538)
.+.++++||||+++|.... .....+.+....+.. ....++++++..... +...++..+. +.|+..+|+|++..
T Consensus 78 ~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~l~~l~-~~Gv~~~k~f~~~~ 153 (451)
T PRK06189 78 SAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVP---GNLEHLRELA-EAGVIGFKAFMSNS 153 (451)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEecccc---cCHHHHHHHH-HcCCcEEEEEcccc
Confidence 9999999999999995211 122334444444443 346788887643332 2356677776 78999999987643
Q ss_pred C---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCC
Q 009282 208 G---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284 (538)
Q Consensus 208 ~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 284 (538)
+ .+..+...+.+.++.+.+.+..+..|+++..........+...|......|...+|...|...+.+++.++++.+.
T Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~ 233 (451)
T PRK06189 154 GTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGC 233 (451)
T ss_pred CCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCC
Confidence 2 2345678889999999999999999999877655555555667777776777788999999999999999999999
Q ss_pred CEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEE
Q 009282 285 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLV 364 (538)
Q Consensus 285 ~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~l 364 (538)
++|+.|+++....+.++.+++.|..+++++++|+++++++.+.. .+..++++||+|...+++.++++++.|+.+++
T Consensus 234 ~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i 309 (451)
T PRK06189 234 PLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER----IGAVAKCAPPLRSRSQKEELWRGLLAGEIDMI 309 (451)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC----cCCceEEeCCCCChhhHHHHHHHHhCCCceEE
Confidence 99999999999999999999999999999999999999887653 24678999999999999999999999999999
Q ss_pred eCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccE
Q 009282 365 GTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADI 444 (538)
Q Consensus 365 gtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADl 444 (538)
+|||.|++...|. ..+|+..+.|++|++..++..+..++..++++++++++++|.|||++||+ +++|+|++|+.|||
T Consensus 310 ~sDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~lgl-~~~G~l~~G~~ADl 386 (451)
T PRK06189 310 SSDHSPCPPELKE--GDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKRFGL-PQKGRLEVGADADF 386 (451)
T ss_pred ECCCCCCCHHHcC--cCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHHhCC-CCCCcccCCCcCCE
Confidence 9999999887664 13688899999999999999987777777899999999999999999999 66899999999999
Q ss_pred EEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 445 IIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 445 vvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
+|+|++..+.++++++.+...|+||+|..+.++|.+|+++|++||++|+++.. .+|+++++.
T Consensus 387 vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~~g~~~~~-~~G~~~~~~ 448 (451)
T PRK06189 387 VLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQDGEVFPP-PRGQLLRPS 448 (451)
T ss_pred EEEcCCCCEEECHHHhhhcCCCCCcCCcEEEeEEEEEEECCEEEEECCEEccC-CCCcEecCC
Confidence 99999999999988888888999999999999999999999999999998864 489999873
No 10
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=1.5e-54 Score=444.81 Aligned_cols=438 Identities=28% Similarity=0.404 Sum_probs=374.5
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++++|+|++|++.+....++|+|+||+|++|++... .+.++||++|++|+|||||.|+|+..+ +....+++....
T Consensus 2 ~~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~--~~~~~iD~~G~~v~Pg~iD~h~h~~~~--~~~~~e~~~~~~ 77 (449)
T PRK08044 2 SFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG--DAKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYETGT 77 (449)
T ss_pred CceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC--CCCeEEECCCCEEcCCeeccccccCCC--CccccccHHHHH
Confidence 4578999999998766667899999999999987542 357899999999999999999999876 545578899999
Q ss_pred HHHHhCCcEEEecccC-C-CCCCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCC
Q 009282 132 AAALAGGTTMHIDFVI-P-INGSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (538)
+.+++.||||++|+.. . +.....+.++...+.. ....+++.++...... ...++..+. +.|+.++|.|+.+.+
T Consensus 78 ~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~-~~gv~~fk~~~~~~~ 153 (449)
T PRK08044 78 RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELD-EVGVVGFKCFVATCG 153 (449)
T ss_pred HHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHH-HcCceEEEEEecccC
Confidence 9999999999999962 2 1124556666555554 3467788777655432 356677766 679999999976532
Q ss_pred C-------ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHH
Q 009282 209 S-------FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (538)
Q Consensus 209 ~-------~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 281 (538)
. ...+...+.+.++.+.+.|.++.+|+++........+.....|...+..|...+|...|...+.+++.+++.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~ 233 (449)
T PRK08044 154 DRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKV 233 (449)
T ss_pred cccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHH
Confidence 1 234677888888989999999999999987665544555677877888888889999999999999999999
Q ss_pred cCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCc
Q 009282 282 VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL 361 (538)
Q Consensus 282 ~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~ 361 (538)
.|.++|+.|++.....+.+..+++.|..++++.++|++.++++.+.. .+..++++||+|...+++++|+++..|..
T Consensus 234 ~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~----~~~~~k~~PPlr~~~d~~aL~~~l~~G~i 309 (449)
T PRK08044 234 AGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEE----IGTLAKCSPPIRDLENQKGMWEKLFNGEI 309 (449)
T ss_pred hCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhC----CCCcEEEcCCCCChHHHHHHHHHHhCCCc
Confidence 99999999999988889999999999999999999999999988753 25788999999999999999999999999
Q ss_pred eEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCC
Q 009282 362 QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSD 441 (538)
Q Consensus 362 ~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ 441 (538)
++++|||.|++...|. .+|+.+|.|++|++..++..+..++..++++++++++++|.|||++||+ ++.|+|++|+.
T Consensus 310 d~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl-~~~G~i~~G~~ 385 (449)
T PRK08044 310 DCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGL-QQKGRIAPGKD 385 (449)
T ss_pred eEEEcCCCCCChHHcc---CChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCC-CCCCcCCCCCc
Confidence 9999999999877765 3788999999999999999998888888899999999999999999999 45799999999
Q ss_pred ccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEee
Q 009282 442 ADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 505 (538)
Q Consensus 442 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~ 505 (538)
|||+++|.+..|.++++++.++..|+||+|+.+.++|..||++|++||++++.+..++.|++++
T Consensus 386 ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~~G~~v~~~~~~~~~~~~G~~~~ 449 (449)
T PRK08044 386 ADFVFIQPNSSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFIL 449 (449)
T ss_pred cCEEEECCCCcEEECHHHccccCCCCCCCCCEEeeeEEEEEECCEEEEECCccccCCCCcccCC
Confidence 9999999999999999999999999999999999999999999999999998766666788764
No 11
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=6.9e-54 Score=441.77 Aligned_cols=436 Identities=30% Similarity=0.455 Sum_probs=370.3
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|++|+++++...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+ +...++++....++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~ 77 (443)
T TIGR03178 1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDIL-GPAAKIIDAGGLVVFPGVVDTHVHINEP--GRTEWEGFETGTRA 77 (443)
T ss_pred CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeccEeccccccCCC--CccccchHHHHHHH
Confidence 47899999999887778999999999999987532 3457899999999999999999999875 55567888888999
Q ss_pred HHhCCcEEEeccc-CC-CCCCHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC-
Q 009282 134 ALAGGTTMHIDFV-IP-INGSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (538)
Q Consensus 134 ~l~~GvTt~~d~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~- 209 (538)
++++||||++||. .. +.....+.++...+... ...++++++.... .+..+++..+. +.|+..+|+|+++.+.
T Consensus 78 ~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~i~~~~-~~G~~~ik~~~~~~~~~ 153 (443)
T TIGR03178 78 AAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLV---PYNLDDLRELD-EAGVVGFKAFLSPSGDD 153 (443)
T ss_pred HHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccC---CCCHHHHHHHH-HCCCcEEEEEecccCCC
Confidence 9999999999996 22 12234455555555443 3567777664433 23456666766 7899999999875432
Q ss_pred --ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 210 --~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
...+.+.+.++++.++++|+++.+|+++........+.+...|......|...+|...+...+.+++++++..+.++|
T Consensus 154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vh 233 (443)
T TIGR03178 154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVH 233 (443)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 356789999999999999999999998887776666677788888888888889999999999999999999999999
Q ss_pred EEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCC
Q 009282 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (538)
Q Consensus 288 ~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD 367 (538)
+.|.++....+.++.+++.|+.++++.++|++.++.+.+.. .+..++++||+|...+++.++++++.|..++++||
T Consensus 234 i~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SD 309 (443)
T TIGR03178 234 VVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD----GGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSD 309 (443)
T ss_pred EEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC----cCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCC
Confidence 99999988889999999999999999999999998887643 24678999999999999999999999999999999
Q ss_pred CCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEE
Q 009282 368 HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIF 447 (538)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvl 447 (538)
|.|++...|. ..+|+.++.|++|++..++..+..++..++++++++++++|.|||+++|+ ++.|+|++|+.|||||+
T Consensus 310 h~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~~g~-~~~G~l~~G~~Ad~vi~ 386 (443)
T TIGR03178 310 HSPCTPDLKR--AGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKRFGL-AQKGRIAPGKDADFVFV 386 (443)
T ss_pred CCCCChHHcC--cCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEE
Confidence 9999876653 24788899999999999998887777788899999999999999999999 66799999999999999
Q ss_pred cCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEe
Q 009282 448 NPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYI 504 (538)
Q Consensus 448 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~ 504 (538)
|.+..+.+++..+.+...|+||+|..+.++|..||++|++||++|+++... .|+++
T Consensus 387 d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~g~~~ 442 (443)
T TIGR03178 387 DPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYDDEQFIGAP-KGQLL 442 (443)
T ss_pred cCCCcEEEcHHHhhhcCCCCCcCCcEEeeEEEEEEECCEEEEECCeeccCC-CCccc
Confidence 998899998888888889999999999999999999999999999998765 77764
No 12
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=1.4e-53 Score=441.66 Aligned_cols=441 Identities=30% Similarity=0.429 Sum_probs=371.5
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
|++|+|++|+++++..+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+... +...++++....++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~~~~~~iDa~G~~v~PG~ID~H~H~~~~--~~~~~e~~~~~s~a 78 (447)
T cd01315 1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEP--GRTEWEGFETGTKA 78 (447)
T ss_pred CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEeccEeeceeccCCC--CccccccHHHHHHH
Confidence 4799999999987777899999999999999865434468999999999999999999999865 44567788888999
Q ss_pred HHhCCcEEEecccCC--CCCCHHHHHHHHHHHhcc-cceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC-
Q 009282 134 ALAGGTTMHIDFVIP--INGSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~- 209 (538)
++++||||+++|... +.....+.++...+.... ..++++++...... ..+++.++. +.|+.++|+++.+++.
T Consensus 79 al~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~ei~~l~-~~G~~giKv~~~~~~~~ 154 (447)
T cd01315 79 AAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPG---NLDQLRPLD-EAGVVGFKCFLCPSGVD 154 (447)
T ss_pred HHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecCC---CHHHHHHHH-HcCCcEEEEEecccCCC
Confidence 999999999999621 122345555555555433 56777765543322 355566666 6799999998765432
Q ss_pred --ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 210 --~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
...+.+.+.++++.++++|+++.+|+++..............|......+...+|...+...+.+++.++++.+.++|
T Consensus 155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ih 234 (447)
T cd01315 155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLH 234 (447)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 235788999999999999999999999887666666666666766666677778999999999999999999999999
Q ss_pred EEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCC
Q 009282 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (538)
Q Consensus 288 ~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD 367 (538)
+.|.+.....+.++.++..|..++++.++|++.++.+.+.. .+..++++||+|...+++.++++++.|..++++||
T Consensus 235 i~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SD 310 (447)
T cd01315 235 IVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD----GGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSD 310 (447)
T ss_pred EEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC----CCCceEECCCCCChHHHHHHHHHHhCCceeEEeCC
Confidence 99999998889999999999999999999999999887753 34788999999999999999999999999999999
Q ss_pred CCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEE
Q 009282 368 HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIF 447 (538)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvl 447 (538)
|.|++...|..+..+|+.++.|+++++..++..+..++..++++++++++++|.|||+++|+++++|+|++|+.|||||+
T Consensus 311 h~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~ 390 (447)
T cd01315 311 HSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVW 390 (447)
T ss_pred CCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEE
Confidence 99998777754445788899999999999998887777788899999999999999999999767899999999999999
Q ss_pred cCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEee
Q 009282 448 NPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 505 (538)
Q Consensus 448 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~ 505 (538)
|.+..+.++.+.+.+...++||.|....++|.+||++|++||++|+++... .|++++
T Consensus 391 d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~ti~~G~~v~~~~~~~~~~-~G~~~~ 447 (447)
T cd01315 391 DPEEEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQDGEVVGEP-LGQLLL 447 (447)
T ss_pred cCCCCEEEcHHHccccCCCCCccCeEEeeeEEEEEECCEEEEECCeEccCC-CceEeC
Confidence 999888888878888888999999999999999999999999999999766 888874
No 13
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=1e-53 Score=434.47 Aligned_cols=418 Identities=21% Similarity=0.275 Sum_probs=340.4
Q ss_pred cEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++|+|++|+++.+. .+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +....+++.+..
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~iDa~g~~vlPG~iD~H~H~~~~--g~~~~e~~~t~s 79 (425)
T PRK07627 2 KIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGFNADKTIDASGLIVCPGLVDLSARLREP--GYEYKATLESEM 79 (425)
T ss_pred eEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCCCCCeEEECCCCEEeccEEeccccccCC--CccccCcHHHHH
Confidence 589999999987643 5789999999999998754323467899999999999999999999776 556778889999
Q ss_pred HHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCC
Q 009282 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (538)
++++++||||++++...... .....++....... .....+..+..... .+.+.+.++..+. +.|+..+|.+ +
T Consensus 80 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~-~~G~~~fk~~----~ 154 (425)
T PRK07627 80 AAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELT-EAGCVGFSQA----N 154 (425)
T ss_pred HHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHH-hCCEEEEEcC----C
Confidence 99999999999998643322 23333433333322 23344333333322 3445677788876 6788888853 2
Q ss_pred CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 209 ~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
.+..+...+.+.++.+++.|..+.+|+++...... .....|......+...+|..+|..++.+++.+++..+.++|+
T Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~---~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi 231 (425)
T PRK07627 155 VPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRG---GVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHL 231 (425)
T ss_pred cccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhC---CCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEE
Confidence 23457888999999999999999999998643221 111112222333455689999999999999999999999999
Q ss_pred EeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCC
Q 009282 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 289 ~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
.|+++...++.++..++.|+.|++++++|||.++++.+.. .+..++++||+|..++++.+|++++.|..++++|||
T Consensus 232 ~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDH 307 (425)
T PRK07627 232 ARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY----FDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDH 307 (425)
T ss_pred EeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc----cCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCC
Confidence 9999999999999999999999999999999999887743 246899999999999999999999999999999999
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
.|++...+. .+|+.++.|++|++..++..+... ..++++++++++++|.|||+++|+ +.|+|++|+.||||++|
T Consensus 308 aP~~~~~k~---~~~~~~~~G~~g~e~~~pl~~~~~-~~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ADlvv~d 381 (425)
T PRK07627 308 TPVDDDEKL---LPFAEATPGATGLELLLPLTLKWA-DEAKVPLARALARITSAPARVLGL--PAGRLAEGAPADLCVFD 381 (425)
T ss_pred CCCCHHHcc---CCHhhCCCCceeHHHHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCcCCEEEEC
Confidence 999877664 389999999999999888777444 456799999999999999999999 46999999999999999
Q ss_pred CCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
.+..+.++++++.+...|+||+|....++|..||++|++||++
T Consensus 382 ~~~~~~v~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~ 424 (425)
T PRK07627 382 PDAHWRVEPRALKSQGKNTPFLGYELPGRVRATLVAGQVAFER 424 (425)
T ss_pred CCCcEEEChhhccccCCCCCCcCCEeeeEEEEEEECCEEEeec
Confidence 9999999999999999999999999999999999999999986
No 14
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=5.4e-53 Score=427.77 Aligned_cols=411 Identities=24% Similarity=0.351 Sum_probs=349.3
Q ss_pred ccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCC-CCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~-~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
.+++|+|++|+++.+ ...++|+|+||+|++|+++... +.+.++||++|++|+|||||+|+|+..+ +....+++.+
T Consensus 2 ~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~~iDa~G~~vlPG~ID~H~H~~~~--~~~~~e~~~s 79 (418)
T PRK07369 2 SNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPIPPDTQIIDASGLILGPGLVDLYSHSGEP--GFEERETLAS 79 (418)
T ss_pred CCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccCCCCCEEEECCCCEEecCEEecccccCCC--CcCCCccHHH
Confidence 468999999998653 2678999999999999876432 3467899999999999999999999876 6667899999
Q ss_pred HHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCC-hhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..++++++||||+++|....+. ...+.++...+... ...+++.++....... ++.+.++..+. +.|+..+|.
T Consensus 80 ~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~-~~Gv~~f~~---- 154 (418)
T PRK07369 80 LAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELA-AAGVVGFTD---- 154 (418)
T ss_pred HHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHH-HCCCEEEEC----
Confidence 9999999999999999754333 45566666655553 4678888887776543 34577777776 678887762
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
+....+...+.+.++.+++.|.++.+|+++....... +...|......|...+|..+|..++.+++.+++..+.++
T Consensus 155 -~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~ 230 (418)
T PRK07369 155 -GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNG---VMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPV 230 (418)
T ss_pred -CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcC---cccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcE
Confidence 2233467788899999999999999999987653322 223344444455667899999999999999999999999
Q ss_pred EEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 287 ~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
|+.|+++...++.++.+++.|+.|++++++||+.++++.+.. .+..++++||+|...+++++|++++.|...+++|
T Consensus 231 hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~----~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~S 306 (418)
T PRK07369 231 HLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS----YDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAI 306 (418)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc----cCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEc
Confidence 999999999999999999999999999999999999987753 2367899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
||+|++..+|.. +|+.+++|++|++..++..++.++..++++++++++++|.|||++||+. .|+|++|+.|||++
T Consensus 307 DHaP~~~~~K~~---~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi 381 (418)
T PRK07369 307 DHAPYTYEEKTV---AFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELIL 381 (418)
T ss_pred CCCCCCHHHccC---CHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEE
Confidence 999999888763 7999999999999999999988888888999999999999999999994 49999999999999
Q ss_pred EcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEE
Q 009282 447 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 483 (538)
Q Consensus 447 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v 483 (538)
+|.+..|.++.+++.+...|+||+|+.+.++|..||+
T Consensus 382 ~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~ 418 (418)
T PRK07369 382 FDPQKTWTVSAQTLHSLSRNTPWLGQTLKGRVLQTWV 418 (418)
T ss_pred EcCCCCEEECcccccCCCCCCCCCCCEeeeEEEEEEC
Confidence 9999999999999999999999999999999999985
No 15
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=1.2e-51 Score=424.53 Aligned_cols=436 Identities=25% Similarity=0.360 Sum_probs=354.5
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
++++|+|++|++.+....++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+..+ +....+.+....+
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~ 79 (444)
T PRK09236 2 KRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAKSADTVIDAAGRYLLPGMIDDQVHFREP--GLTHKGDIASESR 79 (444)
T ss_pred ccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCCCCCeEEECCCCEECCCEEEcccccccC--cccccccHHHHHH
Confidence 46899999999977666789999999999998764333457899999999999999999998765 4445577888899
Q ss_pred HHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeC-CC
Q 009282 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-GS 209 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~-~~ 209 (538)
.++++||||++||+...+. ...+.+....+.. ....++++++.+.. .+...++..+. +.|..++|+|.... +.
T Consensus 80 aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~e~~~l~-~~g~~g~k~~~~~~~~~ 155 (444)
T PRK09236 80 AAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSLANYSFYFGAT---NDNLDEIKRLD-PKRVCGVKVFMGASTGN 155 (444)
T ss_pred HHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccC---cccHHHHHHHH-HccCcEEEEEeccCCCC
Confidence 9999999999999743322 3344454444443 34577887776433 22356666666 67889999987532 22
Q ss_pred c-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc-CCC-CcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 210 F-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL-GIT-GPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 210 ~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
. ..+.+.++++++ ..+.++..|+++...+......+... |.. ....|...+|...+..++.+++.+++..+.++
T Consensus 156 ~~~~~~~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~ 232 (444)
T PRK09236 156 MLVDNPETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRL 232 (444)
T ss_pred cccCcHHHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHHCCCE
Confidence 2 233455566654 45899999998876655444333332 532 44566667899999999999999999999999
Q ss_pred EEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 287 ~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
|+.|+++....+.++..+..|..++++.++|+++++++.+.. .+..++++||+|...+++++++++++|+.+++||
T Consensus 233 hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~igt 308 (444)
T PRK09236 233 HVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR----LGNLIKCNPAIKTASDREALRQALADDRIDVIAT 308 (444)
T ss_pred EEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHhCCCCcEEEC
Confidence 999999988888888888889999999999999999987753 2578899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
||.|.....+.. +|+.++.|+++++..++..++ .+..+++|++++++++|.|||++||+ ++.|+|++|+.||||+
T Consensus 309 Dh~p~~~~~k~~---~~~~~~~G~~~~e~~l~~l~~-~v~~~~~~~~~~~~~~t~~pA~~lgl-~~~G~l~~G~~ADlvi 383 (444)
T PRK09236 309 DHAPHTWEEKQG---PYFQAPSGLPLVQHALPALLE-LVHEGKLSLEKVVEKTSHAPAILFDI-KERGFIREGYWADLVL 383 (444)
T ss_pred CCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHhcCCCHHHHHHHHHHhHHHhcCC-CCCCccccCCcCCEEE
Confidence 999987776653 788899999999988888884 56667799999999999999999999 4579999999999999
Q ss_pred EcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 447 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 447 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
+|++.++.++..++.+...|+||+|....++|.+||++|++||++|+++... .|+++++.
T Consensus 384 ~d~~~~~~~~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~-~G~~~~~~ 443 (444)
T PRK09236 384 VDLNSPWTVTKENILYKCGWSPFEGRTFRSRVATTFVNGQLVYHNGQLVESC-RGQRLEFD 443 (444)
T ss_pred EcCCCCEEEchHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEccCc-CceEeecC
Confidence 9999999999888899999999999999999999999999999999999766 89999854
No 16
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=1.6e-52 Score=426.34 Aligned_cols=419 Identities=22% Similarity=0.325 Sum_probs=348.3
Q ss_pred cccEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCC---CCCCceEEecCCCeeeccccccccccccccCCCCChhh
Q 009282 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNIN---VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDD 126 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~---~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~ 126 (538)
+.+++|+|++|+++++. .+++|+|+||+|++|++... .+.+.++||++|++|+|||||+|+|+..+ +....+.
T Consensus 2 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~--~~~~~e~ 79 (429)
T PRK09059 2 MRPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEP--GAEHRET 79 (429)
T ss_pred CcCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCC--Cchhhhh
Confidence 56799999999997764 47899999999999987532 23457899999999999999999999765 5556788
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeecC-ChhhHHHHHHHHHHcCCcEEEEE
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKFF 203 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~ik~~ 203 (538)
+....++++++||||+++|....+. ...+.++........ ..+++.++...... .++.+.++..+. +.|+..++..
T Consensus 80 ~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~~f~~~ 158 (429)
T PRK09059 80 IASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLR-AAGAVAFTDG 158 (429)
T ss_pred HHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHH-hcCcEEEecC
Confidence 8888999999999999999654332 445556665555543 57788877766554 445577777776 6677766521
Q ss_pred eeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC
Q 009282 204 MAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (538)
Q Consensus 204 ~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 283 (538)
+....+...+.++++.+++.|.++.+|+++........ ...|......|...+|..+|..++.+++.++...+
T Consensus 159 ----~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~---~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~ 231 (429)
T PRK09059 159 ----RRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGNGV---MNEGLFASWLGLSGIPREAEVIPLERDLRLAALTR 231 (429)
T ss_pred ----CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCC---cCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 22334667788999999999999999999876432100 11111112234456899999999999999999999
Q ss_pred CCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceE
Q 009282 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQL 363 (538)
Q Consensus 284 ~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~ 363 (538)
.++|+.|+++....+.++.+++.|+.|++++++|||.++++.+.. .+..++++||+|..++++.++++++.|...+
T Consensus 232 ~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~ 307 (429)
T PRK09059 232 GRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE----YRTFFKLSPPLRTEDDRVAMVEAVASGTIDI 307 (429)
T ss_pred CcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc----cCCccEEcCCCCCHHHHHHHHHHHHcCCCcE
Confidence 999999999999999999999999999999999999999887643 2467899999999999999999999999999
Q ss_pred EeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCcc
Q 009282 364 VGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDAD 443 (538)
Q Consensus 364 lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~AD 443 (538)
++|||.|++...|.. +|+..++|++|++..++..+ .++..+++++++++++.|.|||++||+ + .|+|++|+.||
T Consensus 308 i~sDh~p~~~~~K~~---~~~~~~~G~~gle~~l~~~~-~~v~~~~l~l~~~~~~~s~nPA~~~gl-~-~G~l~~G~~AD 381 (429)
T PRK09059 308 IVSSHDPQDVDTKRL---PFSEAAAGAIGLETLLAAAL-RLYHNGEVPLLRLIEALSTRPAEIFGL-P-AGTLKPGAPAD 381 (429)
T ss_pred EEeCCCCCCHHHCcC---ChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHHhCC-C-cCcccCCCcCC
Confidence 999999999888753 79999999999999999888 467788899999999999999999999 4 59999999999
Q ss_pred EEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 444 IIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 444 lvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
||++|.+..|.++.+.+.+...|+||+|+.+.++|..||++|++||+
T Consensus 382 lvl~d~~~~~~v~~~~~~s~~~~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 382 IIVIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred EEEECCCCCEEECcccCccCCCCCCCCCCEEeeEEEEEEECCEEEee
Confidence 99999999999999999999999999999999999999999999985
No 17
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=2.1e-51 Score=421.10 Aligned_cols=430 Identities=25% Similarity=0.385 Sum_probs=343.6
Q ss_pred cccEEEECcEEEcCCC-ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHH
Q 009282 52 SSKILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~-~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~ 130 (538)
+++++|+|++|+++++ ...++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+... +..+.+++...
T Consensus 2 ~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~~~~~vid~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~ 79 (438)
T PRK07575 2 MMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISATAVDTVIDAEGLTLLPGVIDPQVHFREP--GLEHKEDLFTA 79 (438)
T ss_pred cceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEcccEEEeeeccCCC--CCcCcchHHHH
Confidence 5678999999998765 46789999999999999754333236899999999999999999998765 56688999999
Q ss_pred HHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCC
Q 009282 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (538)
.+.++++||||++||....+. ...+.+....... ....++++++..... +.+.++.. ..+..++|.|.....
T Consensus 80 ~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~---~~l~~l~~---~~~~~g~~~f~~~~~ 153 (438)
T PRK07575 80 SRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATP---DNLPELLT---ANPTCGIKIFMGSSH 153 (438)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEccccc---cCHHHHHH---hhCCeEEEEEEeeCC
Confidence 999999999999999643322 3344444433333 456788888765542 22333332 236778888764211
Q ss_pred -Cc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 209 -SF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 209 -~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
.. ..+...+++.+ ...+.++..|+++........ ....|...+..|...+|...|.+.+.+++.+++..+.++
T Consensus 154 ~~~~~~~~~~~~~~~---~~~~~~v~~h~e~~~l~~~~~--~~~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~g~~l 228 (438)
T PRK07575 154 GPLLVDEEAALERIF---AEGTRLIAVHAEDQARIRARR--AEFAGISDPADHSQIQDEEAALLATRLALKLSKKYQRRL 228 (438)
T ss_pred CCcccCcHHHHHHHH---HhCCCEEEEeCcChHHHHhhh--HhhccCcCcccccccCcHHHHHHHHHHHHHHHHHHCCCE
Confidence 11 12334444433 356899999998876432221 222344455566667899999999999999999999999
Q ss_pred EEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 287 ~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
|+.|+++....+.++..+ +..++++.++||++++++.+.. .+..++++||+|...+++++++++++|+.++++|
T Consensus 229 hi~HiSt~~~v~~i~~~k--~~~vt~ev~phhL~l~~~~~~~----~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~s 302 (438)
T PRK07575 229 HILHLSTAIEAELLRQDK--PSWVTAEVTPQHLLLNTDAYER----IGTLAQMNPPLRSPEDNEALWQALRDGVIDFIAT 302 (438)
T ss_pred EEEECCCHHHHHHHHHhc--CCCEEEEEchhhheeCHHHHhC----CCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEec
Confidence 999999988777776544 4789999999999999987653 2467899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
||.|++...|.. +|+..|.|++|++..++.+++.. ..+++|++++++++|.|||++||+ ++.|+|++|+.|||||
T Consensus 303 Dh~p~~~~~k~~---~~~~~~~G~~g~e~~l~~l~~~~-~~~~lsl~~~~~~~s~npAk~lgl-~~~G~L~~G~~ADlvi 377 (438)
T PRK07575 303 DHAPHTLEEKAQ---PYPNSPSGMPGVETSLPLMLTAA-MRGKCTVAQVVRWMSTAVARAYGI-PNKGRIAPGYDADLVL 377 (438)
T ss_pred CCCCCCHHHccC---CcccCCCCcccHHHHHHHHHHHH-hcCCCCHHHHHHHHhhhHHHHcCC-CCCCccCCCCcCCEEE
Confidence 999999887763 78889999999999999999654 567799999999999999999999 5569999999999999
Q ss_pred EcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeec
Q 009282 447 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 506 (538)
Q Consensus 447 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~ 506 (538)
+|.+..+.++.+++.+...|+||+|..+.+++..||++|++||++|+++. ++.|+++++
T Consensus 378 ~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G~v~~tiv~G~~v~~~g~~~~-~~~G~~~~~ 436 (438)
T PRK07575 378 VDLNTYRPVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVFDRGQVNT-EVRGQALTF 436 (438)
T ss_pred EcCCCCEEEchHHccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEcc-CCCceEeec
Confidence 99999999998889999999999999999999999999999999999986 458999874
No 18
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=1.9e-51 Score=422.91 Aligned_cols=431 Identities=28% Similarity=0.444 Sum_probs=353.1
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
.+++|+|++|++.+...+++|+|+||+|++|++....+++.++||++|++|+|||||+|+|+..+ +....+++....+
T Consensus 2 ~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~--g~~~~e~~~~~~~ 79 (443)
T PRK02382 2 RDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHFREP--GYTHKETWYTGSR 79 (443)
T ss_pred ceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCCCCCeEEECCCCEEcCCEeeeeeeccCC--CCCchhhHHHHHH
Confidence 57899999999876667899999999999998654333457899999999999999999998766 5556678888899
Q ss_pred HHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEE-EEEeeeC-C
Q 009282 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSF-KFFMAYK-G 208 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i-k~~~~~~-~ 208 (538)
+++++||||++++...... ...+.++...+... ...++++++.... +..+++..+. +.|+..+ |++..+. +
T Consensus 80 aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~----~~~~~l~~l~-~~gv~~~gkv~~~~~~~ 154 (443)
T PRK02382 80 SAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGINGGVT----GNWDPLESLW-ERGVFALGEIFMADSTG 154 (443)
T ss_pred HHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEEeeec----cchhhHHHHH-hcCccceeEEEEEecCC
Confidence 9999999999998644333 34445555444433 3566666654332 1244566666 4588777 7776542 3
Q ss_pred CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 209 ~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
....+.+.+.++++.+++.|+++.+|+++.......... ..|...+..|...+|...|..++.+++.+++..+.++|+
T Consensus 155 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~--~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi 232 (443)
T PRK02382 155 GMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKL--LKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHI 232 (443)
T ss_pred CcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHh--hcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 345577899999999999999999999887553322211 234445556666789999999999999999999999999
Q ss_pred EeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCC
Q 009282 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 289 ~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
.|+++...++.+.+. . |+++.++|++.++++.+.. .+..++++||+|...+++.++++++.|...+++|||
T Consensus 233 ~h~ss~~~~~~i~~~---~--vt~ev~ph~L~l~~~~~~~----~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh 303 (443)
T PRK02382 233 AHISTPEGVDAARRE---G--ITCEVTPHHLFLSRRDWER----LGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDH 303 (443)
T ss_pred EECCCHHHHHHHHHC---C--cEEEEchhhhhcCHHHHhc----cCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCC
Confidence 999998876766543 2 8999999999999887642 235678999999999999999999999999999999
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
.|++...|.. +|+.+|+|++|++..++.++ .++..++++++++++++|.|||+++|+ ++.|+|++|+.|||+++|
T Consensus 304 ~P~~~~~K~~---~~~~~~~G~~g~e~~~~~~~-~~~~~~~~~l~~~~~~~t~~pA~~~g~-~~~G~l~~G~~AD~vi~d 378 (443)
T PRK02382 304 APHTREEKDA---DIWDAPSGVPGVETMLPLLL-AAVRKNRLPLERVRDVTAANPARIFGL-DGKGRIAEGYDADLVLVD 378 (443)
T ss_pred CCCCHHHhcC---ChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHHcCC-CCCCccCCCCcCCEEEEc
Confidence 9999887764 79999999999999999988 577888899999999999999999999 578999999999999999
Q ss_pred CCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
.+..+.+..+.+.+...|+||++.... .|.+||++|++||++|+++...+.|+++++.
T Consensus 379 ~~~~~~~~~~~~~s~~~~sp~~g~~~~-~v~~tiv~G~~v~~~~~~~~~~~~G~~~~~~ 436 (443)
T PRK02382 379 PDAAREIRGDDLHSKAGWTPFEGMEGV-FPELTMVRGTVVWDGDDINAKRGRGEFLRGR 436 (443)
T ss_pred CCCcEEEcHHHhcccCCCCCcCCCEec-eEEEEEECCEEEEECCEEecCCCCceEeCCc
Confidence 999999998888999999999998755 8899999999999999999876789999874
No 19
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=3.7e-51 Score=419.58 Aligned_cols=431 Identities=27% Similarity=0.366 Sum_probs=350.6
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++++|+|++|++++....++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+ +....+++.+..
T Consensus 4 ~~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~ID~HvH~~~~--~~~~~e~~~t~~ 80 (444)
T PRK09060 4 TFDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSG-ASAGEVIDCRGLHVLPGVIDSQVHFREP--GLEHKEDLETGS 80 (444)
T ss_pred cCcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCC-CCCceEEECCCCEEccCEEeccccccCC--CCCccchHHHHH
Confidence 4578999999999877677999999999999987543 2346899999999999999999998766 556778999999
Q ss_pred HHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeC--
Q 009282 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-- 207 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~-- 207 (538)
++++++||||++++...... ...+.+....+.... .+++++++......+. .++.++....|+.++|.|+++.
T Consensus 81 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~~~ 157 (444)
T PRK09060 81 RAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSSTG 157 (444)
T ss_pred HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccCCC
Confidence 99999999999998643322 445555555554433 6788887765554333 3444444345888899887542
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 208 ~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.....+...+.++++. .+..+..|+++...+... ......| .+..|...+|...|...+.+++.+++..+.++|
T Consensus 158 ~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~-~~~~~~g--~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lh 231 (444)
T PRK09060 158 DLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRER-KGLRVEG--DPSSHPVWRDEEAALLATRRLVRLARETGRRIH 231 (444)
T ss_pred CcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHH-HHHHhcC--CcccccccCCHHHHHHHHHHHHHHHHHHCCCEE
Confidence 2223355566666544 489999999987655433 3444555 445566778999999999999999999999999
Q ss_pred EEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccc-ccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSW-LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 288 ~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
+.|+++...++.++..++ .++++.++|++.++.+. +.. .+..++++||+|...+++.++++++.|+.++++|
T Consensus 232 i~h~st~~~v~~i~~~~~---~vt~ev~ph~l~l~~~~~~~~----~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~s 304 (444)
T PRK09060 232 VLHVSTAEEIDFLADHKD---VATVEVTPHHLTLAAPECYER----LGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGS 304 (444)
T ss_pred EEeCCCHHHHHHHHHhCC---CeEEEeChHHhccCchhhccc----CCceEEEeCCCCCHHHHHHHHHHHhCCCccEEec
Confidence 999999877666654443 48999999999998876 432 2367899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
||.|+....+.. +|+.+++|++|++..+++.+. .+..+.++++++++++|.|||++||+ ++.|+|++|+.|||||
T Consensus 305 Dh~p~~~~~k~~---~~~~~~~G~~g~e~~~~l~~~-~v~~g~l~~~~~~~~~s~~pa~~~gl-~~~G~l~~G~~ADlvl 379 (444)
T PRK09060 305 DHAPHTLEEKAK---PYPASPSGMTGVQTLVPIMLD-HVNAGRLSLERFVDLTSAGPARIFGI-AGKGRIAVGYDADFTI 379 (444)
T ss_pred CCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHhCC-CCCCcccCCCcCCEEE
Confidence 999999887754 788999999999999998884 57788899999999999999999999 5679999999999999
Q ss_pred EcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 447 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 447 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
+|.+..+.++.+.+.++..|+||+|..+.++|..||++|++||++|+++.. ..|+++++.
T Consensus 380 ~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g~~~~tiv~G~~v~~~g~~~~~-~~G~~~~~~ 439 (444)
T PRK09060 380 VDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRVMWDGELVGP-PTGEPVRFL 439 (444)
T ss_pred EcCCCCEEEChHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEECCEEccC-CCccCcccc
Confidence 999999999998899999999999999999999999999999999999974 489998865
No 20
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=2e-50 Score=414.90 Aligned_cols=418 Identities=28% Similarity=0.423 Sum_probs=340.2
Q ss_pred cEEEECcEEEcCCC-ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 54 ~~~i~n~~vv~~~~-~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
+++|+|++|++++. ..+++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..+ +..+.+++....+
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~-~~~~~~iD~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~~~ 78 (423)
T PRK09357 2 MILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE-AEGAEVIDATGLVVAPGLVDLHVHLREP--GQEDKETIETGSR 78 (423)
T ss_pred cEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeCCEEecccccCCC--CccccccHHHHHH
Confidence 47999999998753 468999999999999986522 2357899999999999999999998765 5567888999999
Q ss_pred HHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
.++++||||++|+....+. .....++...+.... +..++..+..... ..++...++..+. ..|+..++ .++.
T Consensus 79 ~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~----~~~~ 153 (423)
T PRK09357 79 AAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALK-EAGVVAFS----DDGI 153 (423)
T ss_pred HHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHH-hCCcEEEE----CCCc
Confidence 9999999999999743332 445555555555433 4455555443322 1233456666665 45654443 2344
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
+..+.+.+++.++.|+++|.++++|+++....... +...|......+...+|...|...+.+++.+++..+.++++.
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~---~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~ 230 (423)
T PRK09357 154 PVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGG---VMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHIC 230 (423)
T ss_pred ccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcc---cccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEE
Confidence 55678999999999999999999999876432211 122233333344456788899999999999999999999999
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~ 369 (538)
|++.....+.++..++.|+.|+++.++|++.++++.+.. .+..+++.||+|...+.+.+++++++|+.+++||||.
T Consensus 231 H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~----~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~ 306 (423)
T PRK09357 231 HVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT----YDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHA 306 (423)
T ss_pred eCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC----cCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCC
Confidence 999999889999889999999999999999999887643 2467899999999999999999999999999999999
Q ss_pred CCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcC
Q 009282 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 449 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~ 449 (538)
|++...++. +|+..+.|+++++..++..+..++..++++++++++++|.|||+++|+. . |+|++|+.|||+++|.
T Consensus 307 p~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~g~~-~-G~i~~G~~AD~~i~d~ 381 (423)
T PRK09357 307 PHAREEKEC---EFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARILGLP-A-GPLAEGEPADLVIFDP 381 (423)
T ss_pred CCChHHccC---CHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-C-CccCCCCcCCEEEEcC
Confidence 998877653 6889999999999999998876777778999999999999999999995 4 9999999999999999
Q ss_pred CCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 450 NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
+..+.++++++.+...|+||+|..+.++|..||++|++||++
T Consensus 382 ~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~~ 423 (423)
T PRK09357 382 EAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDGKIVYQD 423 (423)
T ss_pred CCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECCEEEecC
Confidence 999999988899999999999999999999999999999975
No 21
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=2.3e-50 Score=406.66 Aligned_cols=382 Identities=21% Similarity=0.320 Sum_probs=318.3
Q ss_pred EEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-
Q 009282 73 VYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING- 151 (538)
Q Consensus 73 V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~- 151 (538)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+..+ +. ..+++.++.++++++||||+++|....+.
T Consensus 1 i~I~dG~I~~i~~~~---~~~~viDa~g~~vlPG~ID~HvH~~~~--~~-~~e~~~t~s~aA~aGGvTtv~dmpnt~P~~ 74 (386)
T PRK08417 1 IRIKDGKITEIGSDL---KGEEILDAKGKTLLPALVDLNVSLKND--SL-SSKNLKSLENECLKGGVGSIVLYPDSTPAI 74 (386)
T ss_pred CEEECCEEEEecCCC---CCCeEEECCCCEEccCeeEEeeeeCCC--Cc-ChhhHHHHHHHHHcCCcEEEEeCCCCCCCC
Confidence 689999999998764 357899999999999999999999765 43 35889999999999999999999753222
Q ss_pred CHHHHHHHHHHHhcc---cceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcC
Q 009282 152 SLTAGFEAYEKKAKN---SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG 228 (538)
Q Consensus 152 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g 228 (538)
...+.++...+.... ..+++. ... ..++...++..+. +.|+..+|.+. ..+.+.+.++++.+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~~l~-~~Gv~~~k~~~------~~~~~~l~~~~~~a~~~g 143 (386)
T PRK08417 75 DNEIALELINSAQRELPMQIFPSI---RAL-DEDGKLSNIATLL-KKGAKALELSS------DLDANLLKVIAQYAKMLD 143 (386)
T ss_pred CCHHHHHHHHHHhhccCCcEEEEE---EEE-CCCccHHHHHHHH-HCCCEEEECCC------CCCHHHHHHHHHHHHHcC
Confidence 333444444333222 233332 122 2344577787776 78999887631 357889999999999999
Q ss_pred CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCC
Q 009282 229 ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ 308 (538)
Q Consensus 229 ~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~ 308 (538)
.++..|+++...... .....|......+...+|..+|..++.+++.++...+.++|+.|+++...++.++..++.|+
T Consensus 144 ~~V~~HaEd~~~~~~---~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~ 220 (386)
T PRK08417 144 VPIFCRCEDSSFDDS---GVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGE 220 (386)
T ss_pred CEEEEeCCCHHHhhH---HHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCC
Confidence 999999998765443 23344555555566778999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCC
Q 009282 309 RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (538)
Q Consensus 309 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 388 (538)
.|++++++|||.++++++.. .+..++++||+|..++++.+|+++..|...+++|||.|++...|.. +|+.+|.
T Consensus 221 ~vt~ev~ph~L~l~~~~~~~----~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~~---~~~~a~~ 293 (386)
T PRK08417 221 KLLKEVSIHHLILDDSACEN----FNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKDL---AFDEAAF 293 (386)
T ss_pred CEEEEechHHHeeCHHHhcC----cCcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhHCCC
Confidence 99999999999999987642 2357899999999999999999999999999999999999887753 7899999
Q ss_pred CCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCc
Q 009282 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNV 468 (538)
Q Consensus 389 g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~ 468 (538)
|++|++..++.++..++..++++++++++++|.|||++||+. + |+|++|+.|||+++|.+..+.++. .|+|
T Consensus 294 G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~~~-------~~~p 364 (386)
T PRK08417 294 GIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQFLGLN-S-GEIEVGKEADLVLFDPNESTIIDD-------NFSL 364 (386)
T ss_pred CchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCC-C-CccCCCCcCCEEEEcCCCCeEeCC-------CCCC
Confidence 999999999999988888888999999999999999999994 4 999999999999999998887763 4789
Q ss_pred cCCeEEeeEEEEEEECCEEEEE
Q 009282 469 YEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 469 ~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
|+|..+.++|..||++|++||+
T Consensus 365 ~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 365 YSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred ccCCEEeccEEEEEECCEEEeC
Confidence 9999999999999999999984
No 22
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=9.5e-49 Score=398.95 Aligned_cols=405 Identities=28% Similarity=0.409 Sum_probs=336.5
Q ss_pred eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCC
Q 009282 69 QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (538)
Q Consensus 69 ~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~ 148 (538)
..++|+|+||||++|++.. .+.+.++||++|++|+|||||+|+|+... +....+++....+.++++||||++++...
T Consensus 4 ~~~~v~I~~g~I~~i~~~~-~~~~~~~ida~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~~~~~GvTtv~~~~~t 80 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLR-IPPDAEVIDAKGLLVLPGFIDLHVHLRDP--GEEYKEDIESGSKAAAHGGFTTVADMPNT 80 (411)
T ss_pred EEEEEEEECCEEEEeeccC-CCCCCeEEECCCCEEecCEEEcccCCCCC--CCccHhHHHHHHHHHHhCCeEEEEEecCC
Confidence 5689999999999997522 23356899999999999999999999754 44567888888999999999999998643
Q ss_pred CCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCCh-hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHH
Q 009282 149 ING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDE-VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (538)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~ 225 (538)
.+. ...+.++...+... ...+++.++........ +.+.++..+. ..|+.+ +.|..+ +.+..+...+.++++.++
T Consensus 81 ~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~g-~~f~~~-~~~~~~~~~l~~~~~~a~ 157 (411)
T TIGR00857 81 KPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELK-EAGAVG-RMFTDD-GSEVQDILSMRRALEYAA 157 (411)
T ss_pred CCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHH-HCCcEE-EEEEeC-CcccCCHHHHHHHHHHHH
Confidence 322 45555665555543 35788887776655432 2456666666 668877 223222 223467899999999999
Q ss_pred hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHH
Q 009282 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK 305 (538)
Q Consensus 226 ~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~ 305 (538)
++|+++.+|+++....... ....|...+..|...+|..+|..++.+++.++...+.++|+.|+++...++.++..++
T Consensus 158 ~~g~~v~iH~E~~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~ 234 (411)
T TIGR00857 158 IAGVPIALHAEDPDLIYGG---VMHEGPSAAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKS 234 (411)
T ss_pred HcCCEEEEecCCHHHHhhh---hhcCCcccHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHH
Confidence 9999999999987654322 3445656666777889999999999999999999999999999999999999999999
Q ss_pred cCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCccc
Q 009282 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (538)
Q Consensus 306 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~ 385 (538)
.|+.|+++.++|+++++.+.+.. .+..++++||+|..++++.++++++.|...+++|||.|+....+.. +|+.
T Consensus 235 ~g~~v~~ev~ph~L~~~~~~~~~----~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~---~~~~ 307 (411)
T TIGR00857 235 QGIKITAEVTPHHLLLSEEDVAR----LDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKTK---EFAA 307 (411)
T ss_pred cCCcEEEeechhhheecHHHHhC----CCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHccC---CHhh
Confidence 99999999999999999887753 3478999999999999999999999999999999999998776653 7889
Q ss_pred CCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCC
Q 009282 386 IPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLD 465 (538)
Q Consensus 386 ~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~ 465 (538)
.+.|+++++..++..+. .+..++++++++++++|.|||+++|++ +.|+|++|+.|||+++|.+..+.++.+++.+...
T Consensus 308 ~~~G~~g~e~~~~~~~~-~~~~~~~~~~~~~~~~t~~pa~~~g~~-~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~ 385 (411)
T TIGR00857 308 APPGIPGLETALPLLLQ-LLVKGLISLKDLIRMLSINPARIFGLP-DKGTLEEGNPADITVFDLKKEWTINAETFYSKAK 385 (411)
T ss_pred CCCCceeHHHHHHHHHH-HHHhCCCCHHHHHHHHhHHHHHHhCCC-CCCccCCCCcCCEEEEcCCCCEEEchHHCccCCC
Confidence 99999999999998884 454557999999999999999999994 4499999999999999999999999888888999
Q ss_pred CCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 466 TNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 466 ~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++||+|..+.++|.+|+++|++||++
T Consensus 386 ~sp~~g~~~~g~v~~tiv~G~~v~~~ 411 (411)
T TIGR00857 386 NTPFEGMSLKGKPIATILRGKVVYED 411 (411)
T ss_pred CCCcCCCEEEeEEEEEEECCEEEecC
Confidence 99999999888999999999999975
No 23
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=1.1e-48 Score=393.05 Aligned_cols=402 Identities=21% Similarity=0.302 Sum_probs=324.2
Q ss_pred EECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHh
Q 009282 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALA 136 (538)
Q Consensus 57 i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~ 136 (538)
|.| ++++.+..+.++|+|+||||++|+++.. +.++||++| +|+|||||+|+|+..+ |....+++.++.+++++
T Consensus 3 ~~~-~~~~~~~~~~~di~I~dGkI~~i~~~~~---~~~~ida~g-~vlPG~ID~HvH~r~p--g~~~ked~~s~s~AAaa 75 (409)
T PRK01211 3 ICG-NFYYKGKFDYLEIEVEDGKIKSIKKDAG---NIGKKELKG-AILPAATDIHVHFRTP--GETEKEDFSTGTLSAIF 75 (409)
T ss_pred eec-eeEEcCcEEEEEEEEECCEEEEecCCCC---CceEEEecc-EEcCCeEEeeeccCCC--CCcccCcHHHHHHHHHc
Confidence 444 4454455667899999999999987542 468999999 9999999999999988 77889999999999999
Q ss_pred CCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCH
Q 009282 137 GGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIND 214 (538)
Q Consensus 137 ~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~ 214 (538)
.||||++||....+. ...+.++...+... ...++++++......+. + +. ..|+.++|+|..+... ....
T Consensus 76 GGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~~----~---~~-~~g~~~~k~f~~~~~~-~~~~ 146 (409)
T PRK01211 76 GGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA----L---IL-DERSIGLKVYMGGTTN-TNGT 146 (409)
T ss_pred CCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCchh----h---HH-hccCcEEEEEcCCCcC-CCcc
Confidence 999999999753322 45666666665553 46888988876533221 1 22 3488899998653210 0011
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH
Q 009282 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (538)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~ 294 (538)
......++.+.+.|..+..|+++......... ..+ ....|...+|..+|..++.+++.++.. ++|+.|.++.
T Consensus 147 ~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~---~~~--~~~~~~~~rP~~aE~~ai~~~~~la~~---~~hi~HvSt~ 218 (409)
T PRK01211 147 DIEGGEIKKINEANIPVFFHAELSECLRKHQF---ESK--NLRDHDLARPIECEIKAVKYVKNLDLK---TKIIAHVSSI 218 (409)
T ss_pred ccCHHHHHHHHccCCEEEEeccChHHhhhhhh---Ccc--hHhhCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEecCh
Confidence 11223446667899999999998765432211 111 112356678999999999999998876 6999999997
Q ss_pred HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChh
Q 009282 295 DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNST 374 (538)
Q Consensus 295 ~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~ 374 (538)
... ..|++++++|||.++++.. .+..++++||+|..++++++|+++..|..++++|||+|++..
T Consensus 219 ~~~----------~~vt~Ev~phhL~l~~~~~------~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~~ 282 (409)
T PRK01211 219 DVI----------GRFLREVTPHHLLLNDDMP------LGSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHTEE 282 (409)
T ss_pred hhc----------CceEEEecHHHHccccccc------cCCceeEcCCCCCHHHHHHHHHHHhCCCCCEEeCCCCCCChh
Confidence 753 2799999999999998751 346899999999999999999999999999999999999877
Q ss_pred hhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCcee
Q 009282 375 QKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFE 454 (538)
Q Consensus 375 ~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~ 454 (538)
+| .+|+.+|+|++|++..+++++ .++..+++|++++++..|.|||++||+ + .|+|++|+.|||||+|++..+.
T Consensus 283 eK----~~~~~a~~G~~gle~~lpl~~-~~v~~~~isl~~~v~~~s~nPAki~gl-~-kG~l~~G~~ADlvi~D~~~~~~ 355 (409)
T PRK01211 283 DK----QEFEYAKSGIIGVETRVPLFL-ALVKKKILPLDVLYKTAIERPASLFGI-K-KGKIEEGYDADFMAFDFTNIKK 355 (409)
T ss_pred Hh----CCHhhCCCCCCcHHHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcCCEEEEcCCCeEE
Confidence 75 378999999999999999988 578888899999999999999999999 4 6999999999999999999999
Q ss_pred eccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 455 ITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
++.+.+.+...|+||+|+.+. +|..||++|++||++++++... .|+++++.
T Consensus 356 v~~~~~~s~~~~spf~G~~~~-~v~~tiv~G~~v~~~~~~~~~~-~G~~~~~~ 406 (409)
T PRK01211 356 INDKRLHSKCPVSPFNGFDAI-FPSHVIMRGEVVIDNYELISER-TGKFVPKG 406 (409)
T ss_pred EChHHhhccCCCCCCCCCEec-cEEEEEECCEEEEECCEEcccc-CceEeccC
Confidence 999999999999999999877 9999999999999999998776 89999864
No 24
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=8.1e-47 Score=380.27 Aligned_cols=392 Identities=25% Similarity=0.334 Sum_probs=312.1
Q ss_pred CcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCC
Q 009282 59 GGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGG 138 (538)
Q Consensus 59 n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~G 138 (538)
+++|++.....+++|+|+||+|++|++. . .++.++||++|++|+|||||+|+|+... +....+++.+..++++++|
T Consensus 3 ~~~v~~~~~~~~~~i~i~~G~I~~i~~~-~-~~~~~~iD~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~aa~~gG 78 (398)
T PRK04250 3 EGKFLLKGRIVEGGIGIENGRISKISLR-D-LKGKEVIKVKGGIILPGLIDVHVHLRDF--EESYKETIESGTKAALHGG 78 (398)
T ss_pred eEEEEECCcEEEEEEEEECCEEEEeeCC-C-CCCCeEEECCCCEEccCEEeccccccCC--CCCcHHHHHHHHHHHHhCC
Confidence 5688887777789999999999999741 1 1256899999999999999999999654 4567788999999999999
Q ss_pred cEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHH
Q 009282 139 TTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216 (538)
Q Consensus 139 vTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~ 216 (538)
|||+++|....+. ...+.++...+... ..+++++++. ....+ ..++.++. . ..+|.|+.+..... ..+.
T Consensus 79 vTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~---~~~l~~l~-~---~~~k~f~~~~~~~~-~~~~ 149 (398)
T PRK04250 79 ITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAGN---CEKAEEIK-A---DFYKIFMGASTGGI-FSEN 149 (398)
T ss_pred eEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCCC---HHHHHHHH-h---hheEEEEecCCCch-hHHH
Confidence 9999999644332 45566666555554 4688888877 43322 33344443 1 24677764422111 1222
Q ss_pred HHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHH
Q 009282 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA 296 (538)
Q Consensus 217 l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~ 296 (538)
+... ..+.+..+.+|+++..... + ...+|..+|..++.+++.++...+.++|+.|.++...
T Consensus 150 ~~~~---~~~~~~~v~~H~E~~~~~~---------~-------~~~~p~~aE~~av~r~~~la~~~~~~lhi~HvSt~~~ 210 (398)
T PRK04250 150 FEVD---YACAPGIVSVHAEDPELIR---------E-------FPERPPEAEVVAIERALEAGKKLKKPLHICHISTKDG 210 (398)
T ss_pred HHHH---HHhcCCeEEEEecChhhhh---------c-------ccCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHH
Confidence 2221 2233567999999875432 1 1247889999999999999999999999999999877
Q ss_pred HHHHHHHHHcCCc-EEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhh
Q 009282 297 MEEIAKARKAGQR-VIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQ 375 (538)
Q Consensus 297 ~~~i~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~ 375 (538)
.+.+ ++.|.. |++++++|||.++++.+. .+..++++||+|...+++++|+++.. .++++|||.|++...
T Consensus 211 ~~~i---~~~g~~~vt~Ev~ph~L~l~~~~~~-----~~~~~k~~PPLR~~~d~~aL~~~l~~--Id~i~sDHaP~~~~~ 280 (398)
T PRK04250 211 LKLI---LKSNLPWVSFEVTPHHLFLTRKDYE-----RNPLLKVYPPLRSEEDRKALWENFSK--IPIIASDHAPHTLED 280 (398)
T ss_pred HHHH---HHcCCCcEEEEeCHHHhccCHHHHC-----CCCceEEcCCCCCHHHHHHHHHhhcc--CCEEEcCCcccCHHH
Confidence 6655 456887 999999999999998762 24789999999999999999999964 899999999999877
Q ss_pred hhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceee
Q 009282 376 KAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEI 455 (538)
Q Consensus 376 ~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~ 455 (538)
+.. .++|++|++..+++++ .++..+++|++++++++|.|||++||+ ++.| |++|+.|||+|+|++..+.+
T Consensus 281 k~~-------~~~G~~g~e~~lpl~~-~~v~~~~lsl~~~v~~~t~npAk~lgl-~~~G-L~~G~~ADlvi~D~~~~~~v 350 (398)
T PRK04250 281 KEA-------GAAGIPGLETEVPLLL-DAANKGMISLFDIVEKMHDNPARIFGI-KNYG-IEEGNYANFAVFDMKKEWTI 350 (398)
T ss_pred hhc-------CCCCcchHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHhCC-CCcC-ccCCCcCCEEEEcCCCcEEE
Confidence 642 4789999999999998 478888899999999999999999999 5579 99999999999999999999
Q ss_pred ccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceE
Q 009282 456 TARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKY 503 (538)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~ 503 (538)
+..++.+...|+||+|..+.++|.+||++|++||++|+++... +|++
T Consensus 351 ~~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~~g~~~~~~-~G~~ 397 (398)
T PRK04250 351 KAEELYTKAGWTPYEGFKLKGKVIMTILRGEVVMEDDEIIGKP-RGVR 397 (398)
T ss_pred ChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEcCCC-CCeE
Confidence 9888889899999999999999999999999999999998754 6665
No 25
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=3.7e-44 Score=358.39 Aligned_cols=375 Identities=21% Similarity=0.249 Sum_probs=297.9
Q ss_pred eeeEEEeCCEEEEecCCCCCCCCceEEec-CCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCC
Q 009282 70 IADVYVEDGIVVAVQPNINVGDDVKVLDA-TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (538)
Q Consensus 70 ~~~V~I~~grI~~Vg~~~~~~~~~~vID~-~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~ 148 (538)
+..|.|++|+|..|++.. +.++++||+ +|++|+|||||+|+|+..+ |....+++.++.+++++.||||+++|...
T Consensus 13 ~~~~~~~~~~~~~i~~~~--~~~~~~id~~~G~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~~mPnt 88 (392)
T PRK00369 13 KEIKEICINFDRRIKEIK--SRCKPDLDLPQGTLILPGAIDLHVHLRGL--KLSYKEDVASGTSEAAYGGVTLVADMPNT 88 (392)
T ss_pred CceEEEeeeeeeeEeecc--CCCCceeecCCCCEEeCCEEEcccccCCC--CCcccccHHHHHHHHHhCCcEEEEECCCC
Confidence 467899999999998753 447889999 6999999999999999887 77788999999999999999999999654
Q ss_pred CCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh
Q 009282 149 ING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS 226 (538)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~ 226 (538)
.+. ...+.++...+... ...++++++...... ..++ . ..|..++|.|.+. ..+. .+++.+.+
T Consensus 89 ~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~----~~el---~-~~~~~g~k~f~~~----~~~~----~~~~~~~~ 152 (392)
T PRK00369 89 IPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKD----PEKV---D-KLPIAGYKIFPED----LERE----ETFRVLLK 152 (392)
T ss_pred CCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCC----HHHH---H-HhhCceEEEECCC----CchH----HHHHHHHH
Confidence 332 55666666666554 468888888754321 1222 2 4477788887421 1122 24444555
Q ss_pred cCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHc
Q 009282 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (538)
Q Consensus 227 ~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~ 306 (538)
++..+.+|+++....... +...+|..+|..++.++..+ .++|+.|.++... ++.+++.
T Consensus 153 ~~~~v~~HaE~~~l~~~~--------------~~~~rp~~aE~~ai~~~~~~-----~~lhi~HvSt~~~---v~~ak~~ 210 (392)
T PRK00369 153 SRKLKILHPEVPLALKSN--------------RKLRRNCWYEIAALYYVKDY-----QNVHITHASNPRT---VRLAKEL 210 (392)
T ss_pred hCCEEEEeCCCHHHhhcc--------------hhcccCHHHHHHHHHHHHHh-----CCEEEEECCCHHH---HHHHHHC
Confidence 669999999987543311 12236666666665555554 7999999999764 4556777
Q ss_pred CCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccC
Q 009282 307 GQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKI 386 (538)
Q Consensus 307 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~ 386 (538)
| +++++++|||.++++. +..++++||+|..++++++|++++. ..+++|||.|+...++.. +|+.+
T Consensus 211 g--vt~Ev~pHhL~l~~~~--------~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~~---~f~~~ 275 (392)
T PRK00369 211 G--FTVDITPHHLLVNGEK--------DCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKLQ---PYEVC 275 (392)
T ss_pred C--CeEEechhHheeccCC--------CCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHccC---CHhhC
Confidence 6 7789999999998751 2568999999999999999999998 789999999998887743 79999
Q ss_pred CCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCC
Q 009282 387 PNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDT 466 (538)
Q Consensus 387 ~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~ 466 (538)
|+|++|++..+++++. ++..++++++++++++|.|||+++|+. .|.|++|+.||||++|++ .+.+ +...+...|
T Consensus 276 ~~Gi~GlE~~lpll~~-~v~~~~lsl~~~v~~~s~nPA~ilgl~--~g~i~~G~~ADlvi~d~~-~~~~--~~~~sk~~~ 349 (392)
T PRK00369 276 PPGIAALSFTPPFIYT-LVSKGILSIDRAVELISTNPARILGIP--YGEIKEGYRANFTVIQFE-DWRY--STKYSKVIE 349 (392)
T ss_pred CCCCeeHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCC-ceeE--ccccccCCC
Confidence 9999999999999885 667888999999999999999999994 388999999999999987 5554 456788899
Q ss_pred CccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 467 NVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 467 ~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
+||+|..+.++|.+||++|++||+++++++..+.|++=+++
T Consensus 350 sp~~G~~l~G~v~~ti~~G~~v~~~~~~~~~~g~G~~~~~~ 390 (392)
T PRK00369 350 TPLDGFELKASVYATIVQGKLAYLEGEVFPVKGINPFGERK 390 (392)
T ss_pred CCCCCCEeeeEEEEEEECCEEEEECCeEecCCCCCCCCccc
Confidence 99999999999999999999999999999888888775544
No 26
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=4.1e-43 Score=349.63 Aligned_cols=358 Identities=30% Similarity=0.420 Sum_probs=296.8
Q ss_pred CCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeee
Q 009282 100 GKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (538)
Q Consensus 100 G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (538)
|++|+|||||+|+|+..+ +....+++.++.++++++||||+++|....+. ...+.++...+.. ....++++++...
T Consensus 1 G~~vlPG~iD~HvH~r~p--g~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~ 78 (361)
T cd01318 1 GLLILPGVIDIHVHFREP--GLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGV 78 (361)
T ss_pred CCEEecCeeEeeecCCCC--CCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCceeEEEEEEee
Confidence 789999999999999887 77788999999999999999999999743332 4556666555554 3468888888765
Q ss_pred ecCChhhHHHHHHHHHHcCCcEEEEEeeeC-CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYK-GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
... +++.++. +.|..++|.|..+. +....+...+.++++.+. .++.+|+++..............+
T Consensus 79 ~~~-----~~l~~~~-~~~~~g~k~f~~~~~~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~---- 145 (361)
T cd01318 79 TGS-----EDLEELD-KAPPAGYKIFMGDSTGDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGES---- 145 (361)
T ss_pred cCh-----hhHHHHH-HhhCcEEEEEEecCCCCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhcc----
Confidence 432 3444554 55788899887542 222257788888887764 789999999876554443322222
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (538)
.|...+|..+|..++.+.+.++...+.++|+.|+++...++.+..++ ..|+++.++|++.++.+.+.. .+..
T Consensus 146 -~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~~~~~~~i~~~k---~~vt~ev~ph~L~l~~~~~~~----~~~~ 217 (361)
T cd01318 146 -AHPRIRDAEAAAVATARALKLARRHGARLHICHVSTPEELKLIKKAK---PGVTVEVTPHHLFLDVEDYDR----LGTL 217 (361)
T ss_pred -CCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHhC---CCeEEEeCHHHhhcCHHHHhc----CCCe
Confidence 56677999999999999999999999999999999988767666555 689999999999999887752 3468
Q ss_pred eeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHH
Q 009282 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (538)
Q Consensus 337 ~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal 416 (538)
++++||+|...+++.++++++.|..++++|||.|+....+.. +|+.+++|++|++..++..+ .++..+++++++++
T Consensus 218 ~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~---~~~~a~~G~~g~e~~l~~~~-~~v~~~~l~l~~a~ 293 (361)
T cd01318 218 GKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRK---GYPAAPSGIPGVETALPLML-TLVNKGILSLSRVV 293 (361)
T ss_pred EEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccC---ChhhCCCCCccHHHHHHHHH-HHHHcCCCCHHHHH
Confidence 999999999999999999999999999999999998877653 78899999999998888877 46677789999999
Q ss_pred HHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 417 RLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 417 ~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
+++|.|||+++|+ +++|+|++|+.|||+|+|++..+.++.+++.+...|+||+|+.+.++|..||++|
T Consensus 294 ~~~t~nPA~~lgl-~~~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~~G~~l~G~v~~t~~~G 361 (361)
T cd01318 294 RLTSHNPARIFGI-KNKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPFEGFEVTGFPVMTIVRG 361 (361)
T ss_pred HHHhHHHHHHhCC-CCCCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEeCc
Confidence 9999999999999 4479999999999999999999999999999999999999999999999999998
No 27
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=1.1e-42 Score=350.72 Aligned_cols=370 Identities=27% Similarity=0.386 Sum_probs=308.0
Q ss_pred ceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-ccee
Q 009282 93 VKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMD 170 (538)
Q Consensus 93 ~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 170 (538)
.++||++|++|+||+||+|+|+..+ +....+++.+..++++.+||||+++|....+. .....++...+.... ...+
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~--~~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREP--GFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGIVR 79 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCC--CccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCcee
Confidence 5789999999999999999999887 55567889999999999999999999754332 455566666555543 5556
Q ss_pred eeeeeeeecCC-hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009282 171 YGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (538)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (538)
+.++......+ .+.++++..+. ..|+..+|.+ +....+...+.++++.+++.|.++.+|+++...... ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~i~~l~-~~G~~~~k~~----~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~---~~~ 151 (374)
T cd01317 80 VLPIGALTKGLKGEELTEIGELL-EAGAVGFSDD----GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGG---GVM 151 (374)
T ss_pred EEEEEEEeeCCCcccHHHHHHHH-HCCcEEEEcC----CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhc---cCc
Confidence 66666555433 23477787776 6788888853 223457888999999999999999999987654331 122
Q ss_pred HcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCC
Q 009282 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (538)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~ 329 (538)
..|......+...+|...+...+.+++.+++..+.++++.|+++....+.++.+++.|+.+++++++|+++++++.+..
T Consensus 152 ~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~- 230 (374)
T cd01317 152 NEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES- 230 (374)
T ss_pred cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc-
Confidence 2343344445556888888889999999999999999999999988888999899999999999999999999988643
Q ss_pred CcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCC
Q 009282 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ 409 (538)
Q Consensus 330 ~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ 409 (538)
.+..++++||+|...+++.++++++.|+.+++||||.|++...++. +|+..+.|++|++..+...++.++..+.
T Consensus 231 ---~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l~~~~~~~~~~~~ 304 (374)
T cd01317 231 ---YDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTLLVKGGL 304 (374)
T ss_pred ---cCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHHHHHHHHHHHcCC
Confidence 2467899999999989999999999999999999999998877654 6889999999999999999988888888
Q ss_pred CCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 410 ISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 410 ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
++++++++++|.|||+++|+. .|+|++|+.|||+++|.+..+.+..+++.+...|+||+|+.+.++|.+|
T Consensus 305 ~~~~~~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~~G~~l~g~~~~t 374 (374)
T cd01317 305 LTLPDLIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374 (374)
T ss_pred CCHHHHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCEEEChhhccccCCCCCCCCCEEeEEEEEC
Confidence 999999999999999999994 3999999999999999999999999999999999999999999988764
No 28
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=1.6e-41 Score=336.36 Aligned_cols=332 Identities=35% Similarity=0.484 Sum_probs=281.0
Q ss_pred CeeeccccccccccccccCCCC-ChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeee
Q 009282 101 KFVMPGGIDPHTHLAMEFMGSE-TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (538)
Q Consensus 101 ~~v~PGlID~H~H~~~~~~~~~-~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (538)
++|+||+||+|+|+..+ +.. ..+++.++.+++++.||||+++|....+. ...+.++...+.. ....++++++...
T Consensus 1 ~~vlPG~iD~HvH~r~p--g~~~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~ 78 (337)
T cd01302 1 LLVLPGFIDIHVHLRDP--GGTTYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSYVDFSFHAGI 78 (337)
T ss_pred CEecCCeeEeeeccCCC--CCCCchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEec
Confidence 57999999999999887 554 78999999999999999999999754332 3455555544444 3467888888766
Q ss_pred ecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCc--cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
... +...++.++. +.|+.++|+|..+.... ..+.+.+.+.++.+.+.|+++.+|++
T Consensus 79 ~~~--~~~~el~~l~-~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E------------------- 136 (337)
T cd01302 79 GPG--DVTDELKKLF-DAGINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAE------------------- 136 (337)
T ss_pred cCc--cCHHHHHHHH-HcCCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHH-------------------
Confidence 543 3466777776 78999999998654322 56888999999999999999999998
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (538)
+++.++...+.++++.|+++...++.++.+++.|+.|+++.++|+++++++.+.. .+.
T Consensus 137 ------------------r~~~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~----~~~ 194 (337)
T cd01302 137 ------------------RAAQLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL----NGA 194 (337)
T ss_pred ------------------HHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhC----CCc
Confidence 1234566778999999999999999999999999999999999999999887742 246
Q ss_pred ceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHH
Q 009282 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (538)
Q Consensus 336 ~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~ea 415 (538)
.++++||+|...+++.+|++++.|..++++|||.|++...+..+ ++|+.+|+|++|++..++..+..+++. +++++++
T Consensus 195 ~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l~~~~~~~~~~-~i~~~~~ 272 (337)
T cd01302 195 WGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRLPILLTEGVKR-GLSLETL 272 (337)
T ss_pred eEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHHHHHHHHHHhc-CCCHHHH
Confidence 78999999999999999999999999999999999988776542 368899999999999999988766654 6999999
Q ss_pred HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 416 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 416 l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
++++|.|||+++|+. ..|+|++|+.|||+++|++..+.++++++.++..|+||+|+.+.++|..|
T Consensus 273 ~~~~s~~pA~~~gl~-~~g~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t 337 (337)
T cd01302 273 VEILSENPARIFGLY-PKGTIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPFEGMEVTGKPVST 337 (337)
T ss_pred HHHHHHHHHHHcCCC-CCCccccCCcCCEEEEeCCCcEEEcHHHhcccCCCCCcCCcEEEEEEEEC
Confidence 999999999999994 46999999999999999999999999999999999999999999988764
No 29
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=5.3e-41 Score=348.32 Aligned_cols=400 Identities=19% Similarity=0.202 Sum_probs=294.4
Q ss_pred cccEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+++++|+|++|+++++. ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|.... +
T Consensus 18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~--~--------- 84 (509)
T PRK09061 18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAAI--EGDRTIDATGLVVAPGFIDLHAHGQSV--A--------- 84 (509)
T ss_pred cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCCC--CCCeEEeCCCCEEecCeEeeeeCCCCC--c---------
Confidence 46789999999997764 45799999999999987532 356899999999999999999997643 1
Q ss_pred HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee-------------------------------
Q 009282 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT------------------------------- 178 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 178 (538)
..+.++..||||++++.. ........++...+. ...++++++.+..
T Consensus 85 ~~~~~~~~GvTtvv~~~~-~~~p~~~~~~~~~~~--~~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (509)
T PRK09061 85 AYRMQAFDGVTTALELEA-GVLPVARWYAEQAGE--GRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPRWQER 161 (509)
T ss_pred cchhhccCCceeEEeecc-CCCCHHHHHHHHHhc--CCcceeehhcCcHHHHHHHhCCcccccccccccccccccccccC
Confidence 145668899999999731 111222223222221 1234555433321
Q ss_pred cCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 179 KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 179 ~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
..+.+.+.++..+.+ +.|+.+++.+..|. +..+.+++.++++.|+++|.++..|+++.....
T Consensus 162 ~~t~~el~~m~~ll~~al~~Ga~gis~~~~y~--p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~~------------- 226 (509)
T PRK09061 162 AATPAELAEILELLEQGLDEGALGIGIGAGYA--PGTGHKEYLELARLAARAGVPTYTHVRYLSNVD------------- 226 (509)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEecCCccC--CCCCHHHHHHHHHHHHHcCCEEEEEecCcccCC-------------
Confidence 011345666766664 57999998765542 345899999999999999999999998653210
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC------HHHHHHHHHHHHcCCcEEEeccccc--------ccc
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------MDAMEEIAKARKAGQRVIGEPVVSG--------LVL 321 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~------~~~~~~i~~~~~~g~~v~~~~~~~~--------~~~ 321 (538)
...+.+.+.++++++...|.++++.|++. ....+.++++++.|+.|+++.+||+ +.+
T Consensus 227 ---------~~~e~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l 297 (509)
T PRK09061 227 ---------PRSSVDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAYPYGAGSTVVGAAFF 297 (509)
T ss_pred ---------chhHHHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEecCcchhhhhhccccc
Confidence 12345778999999999999999999998 6667889999999999999999999 666
Q ss_pred CcccccCCCcccccceee---cCCCCC-------------------------cccHHHHHHHHhcCCceEEeCCCCCCCh
Q 009282 322 DDSWLWHSDFVTAAKYVM---SPPIRA-------------------------SGHNKALQAALATGILQLVGTDHCAFNS 373 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~---~p~~r~-------------------------~~~~~~l~~~l~~Gv~~~lgtD~~~~~~ 373 (538)
++++....+... ...++ .||+|. ..+.+.++..++.+.. +++||+.|...
T Consensus 298 ~~~~~~~~~~~~-~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~~-~i~sD~~p~~~ 375 (509)
T PRK09061 298 DPGWLERMGLGY-GSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPGA-AIASDAMPWTW 375 (509)
T ss_pred CHHHHHHhCCCH-HHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCCc-eEecCCccccc
Confidence 555544211110 11245 777777 3447788889998876 99999999887
Q ss_pred hhhhcCccCcccCCCCCcchh------hhHHHHHHHhhhc-CCCCHHHHHHHHhHhHHHHcC-----CCCCCcccccCCC
Q 009282 374 TQKAFGIDDFRKIPNGVNGIE------ERMHLVWDTMVES-GQISVTDYVRLTSTECARIFN-----VYPRKGAILVGSD 441 (538)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~g~~------~~~~~~~~~~~~~-~~ls~~eal~~aT~~~A~~lg-----~~~~~GsI~~Gk~ 441 (538)
..+. +.|...|+|..+.+ ..++..++.++.. +.+|++++++++|.+||++|| + +++|+|++|+.
T Consensus 376 ~~~~---~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~~l-~~~G~i~~G~~ 451 (509)
T PRK09061 376 SDGT---VYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVPAM-RRKGRLQAGAD 451 (509)
T ss_pred cccc---cccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccccccc-cCCEeeCCCCC
Confidence 7664 47778888876655 5667777666655 459999999999999999999 8 44799999999
Q ss_pred ccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 442 ADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 442 ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
|||||+|++...... .+.++ +.|+.| |++||++|++||++|++++-..+|++++++
T Consensus 452 ADlvv~D~~~~~~~~--~~~~~--~~~~~g------i~~v~v~G~~v~~~g~~~~~~~~G~~lr~~ 507 (509)
T PRK09061 452 ADIVVFDPETITDRA--TFEDP--NRPSEG------VRHVLVNGVPVVSNGELVRDARPGRPVRRP 507 (509)
T ss_pred cCEEEEchhhccccc--ccccc--CCCCCC------ceEEEECCEEEEECCEecCCCCCCeEecCC
Confidence 999999988643221 12221 344443 889999999999999998656689999875
No 30
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=5e-41 Score=344.57 Aligned_cols=379 Identities=18% Similarity=0.231 Sum_probs=256.0
Q ss_pred EEEECcEEEcCCCc----eeeeEEEeCCEEEEecCCCCC--CCCceEEecCCCeeeccccccccccccccCC--------
Q 009282 55 ILIKGGTVVNAHHQ----QIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------- 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~~----~~~~V~I~~grI~~Vg~~~~~--~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-------- 120 (538)
.+|+|++|++++.. ++++|+|+||+|++||+.... +...++||+.|++|+|||||+|+|+++....
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~~ 81 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFLEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSNL 81 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccccccCeEEeCCCCEEccceeeeccCCCccccccccCCCCH
Confidence 47999999998752 579999999999999985432 2356899999999999999999999887321
Q ss_pred -------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChh
Q 009282 121 -------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (538)
Q Consensus 121 -------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (538)
..+++..+.. ...++++||||++|+...........+++..+.+.+..+...+.........+
T Consensus 82 ~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~~~~~~ 161 (419)
T PRK06687 82 HEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSETETTAE 161 (419)
T ss_pred HHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCcccHHH
Confidence 1122223332 33458999999999864322234555666666665543332222111112233
Q ss_pred hHHHHHHHHHH---cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccc
Q 009282 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 184 ~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~ 259 (538)
..++..++.++ .+...++.++.++..+.++++.++++++.|+++|+++.+|+.+.. +.....+ .+|...
T Consensus 162 ~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~---~~g~~~---- 234 (419)
T PRK06687 162 TISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILK---RYGKRP---- 234 (419)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HHCcCH----
Confidence 34444444422 234568888888888899999999999999999999999995543 3322222 223211
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
+ +.+.....++.++.+.|+...++ ++++++++.|+.+++||.+ ++..+.++
T Consensus 235 ------------~-~~l~~~g~l~~~~~~~H~~~~~~-~~~~~la~~g~~v~~~P~s-------------n~~l~~g~-- 285 (419)
T PRK06687 235 ------------L-AFLEELGYLDHPSVFAHGVELNE-REIERLASSQVAIAHNPIS-------------NLKLASGI-- 285 (419)
T ss_pred ------------H-HHHHHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEECcHH-------------hhhhccCC--
Confidence 1 11222344567888999998887 8899999999999988775 22222221
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCHHHHHH
Q 009282 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYVR 417 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~~eal~ 417 (538)
.++++++++|+++++|||....+....++ . ++.....+++.. ....++++++|+
T Consensus 286 ----------~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (419)
T PRK06687 286 ----------APIIQLQKAGVAVGIATDSVASNNNLDMF-----E---------EGRTAALLQKMKSGDASQFPIETALK 341 (419)
T ss_pred ----------CcHHHHHHCCCeEEEeCCCCCCCCChhHH-----H---------HHHHHHHHhccccCCCccCCHHHHHH
Confidence 22789999999999999975433222111 1 222222222211 122489999999
Q ss_pred HHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC-ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeec
Q 009282 418 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNS-SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 418 ~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~ 496 (538)
++|.+||+++|+++++|+|++||.|||+++|.+. +...+ ..++.....|.+. ..+|..|||+|++|+++|++++
T Consensus 342 ~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p---~~~~~~~lv~~~~--~~~v~~v~v~G~~v~~~g~~~~ 416 (419)
T PRK06687 342 VLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQP---QENMLSHLVYAVK--SSDVDDVYIAGEQVVKQGQVLT 416 (419)
T ss_pred HHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcCC---ccCHHHHhheeCC--CCCccEEEECCEEEEECCeEec
Confidence 9999999999998789999999999999999763 32222 1223333455543 4689999999999999999988
Q ss_pred cC
Q 009282 497 VP 498 (538)
Q Consensus 497 ~~ 498 (538)
.|
T Consensus 417 ~d 418 (419)
T PRK06687 417 VE 418 (419)
T ss_pred CC
Confidence 75
No 31
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=3.7e-40 Score=338.01 Aligned_cols=379 Identities=20% Similarity=0.253 Sum_probs=255.2
Q ss_pred cEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCC--CCCCceEEecCCCeeeccccccccccccccCC-------
Q 009282 54 KILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG------- 120 (538)
Q Consensus 54 ~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~--~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~------- 120 (538)
+++|+|++|++++. .++++|+|+||+|++||+... .+++.++||++|++|+|||||+|+|+++.+..
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~~~ 81 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASDFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDDML 81 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccccCCCCeEEeCCCCEEccceeecccCccchhhhccCCCCC
Confidence 57999999998764 268899999999999998532 23457899999999999999999999865210
Q ss_pred --------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-eeecCC
Q 009282 121 --------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AITKWD 181 (538)
Q Consensus 121 --------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 181 (538)
..+++..+. ....++++||||++|+............++..+.+.+..+...... ......
T Consensus 82 l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~ 161 (435)
T PRK15493 82 LQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTKEDE 161 (435)
T ss_pred HHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCCCccH
Confidence 112232222 2344689999999998643322233445556666666544332221 111111
Q ss_pred hhhHHHHHHHHHHc-C-CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHHcCCCCccc
Q 009282 182 EVVSDEMEVMVKEK-G-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 182 ~~~~~~~~~~~~~~-g-~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+++...+.++. + ...++..+.++..+.++++.++++++.|+++|+++++|+.+ ..+.....+ .+|...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~---~~g~~~--- 235 (435)
T PRK15493 162 KKAIEEAEKYVKRYYNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEA---QYGKRP--- 235 (435)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCCCH---
Confidence 22333444443222 2 35578888888888899999999999999999999999954 333322222 223211
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
++ .+.....++.++.+.|+...++ ++++++++.|+.+++||.+ ++..+.++
T Consensus 236 -------------~~-~l~~~Gll~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~s-------------n~~l~~g~- 286 (435)
T PRK15493 236 -------------VE-YAASCGLFKRPTVIAHGVVLND-NERAFLAEHDVRVAHNPNS-------------NLKLGSGI- 286 (435)
T ss_pred -------------HH-HHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCeEEEChHH-------------HHHHhcCc-
Confidence 11 1222344567889999999887 8899999999999998875 22222222
Q ss_pred ecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCHHHHH
Q 009282 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYV 416 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~~eal 416 (538)
.+++.++++|+++++|||+...+....+ |. ++.+...+++.+ ....++++++|
T Consensus 287 -----------~p~~~~~~~Gv~v~lGtD~~~~~~~~d~-----~~---------~~~~a~~~~~~~~~~~~~~~~~~~l 341 (435)
T PRK15493 287 -----------ANVKAMLEAGIKVGIATDSVASNNNLDM-----FE---------EMRIATLLQKGIHQDATALPVETAL 341 (435)
T ss_pred -----------ccHHHHHHCCCeEEEccCccccCCCcCH-----HH---------HHHHHHHHHhhccCCCCcCCHHHHH
Confidence 2378999999999999997543322211 11 333333333322 23469999999
Q ss_pred HHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC-ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 417 RLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS-SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 417 ~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
+++|.+||+++|++ +.|+|++||.||||++|.+. +...+. .++.....|.+. ...|..|||+|++|+++|+++
T Consensus 342 ~~aT~~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~p~---~d~~~~lv~~~~--~~~V~~v~V~G~~v~~~g~~~ 415 (435)
T PRK15493 342 TLATKGAAEVIGMK-QTGSLEVGKCADFITIDPSNKPHLQPA---DEVLSHLVYAAS--GKDISDVIINGKRVVWNGECK 415 (435)
T ss_pred HHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCCCCcCCc---cChHHhEEEeCC--CCCccEEEECCEEEEECCeEC
Confidence 99999999999994 58999999999999999653 322222 222233344432 357999999999999999999
Q ss_pred ccC
Q 009282 496 VVP 498 (538)
Q Consensus 496 ~~~ 498 (538)
+.|
T Consensus 416 ~~d 418 (435)
T PRK15493 416 TLD 418 (435)
T ss_pred CCC
Confidence 987
No 32
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=4.6e-39 Score=328.54 Aligned_cols=356 Identities=22% Similarity=0.257 Sum_probs=258.8
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 54 ~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++|+|++|+++.+ ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+ ... ....
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~iD~H~H~~~~--~~~-----~~~~ 72 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILS-TSAREVIDAAGLVVAPGFIDVHTHYDGQ--VFW-----DPDL 72 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCC-CCCCeEEECCCCEEccCEeeeeecCCcc--ccc-----Ccch
Confidence 47899999999865 357899999999999987543 2357899999999999999999999765 211 1226
Q ss_pred HHHHhCCcEEEecccCC---CCCCH------H-----------------HHHHHHHHHh-cc-cceeee---eeeeee--
Q 009282 132 AAALAGGTTMHIDFVIP---INGSL------T-----------------AGFEAYEKKA-KN-SCMDYG---FHMAIT-- 178 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~---~~~~~------~-----------------~~~~~~~~~~-~~-~~~~~~---~~~~~~-- 178 (538)
+.++++||||++++... ..... . +.++.+.+.. .. ..++++ ++....
T Consensus 73 ~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~ 152 (415)
T cd01297 73 RPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRRA 152 (415)
T ss_pred hhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHHH
Confidence 77899999999987431 11100 0 2233334433 22 356666 443332
Q ss_pred -------cCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHH
Q 009282 179 -------KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248 (538)
Q Consensus 179 -------~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~ 248 (538)
..+++.++++.++.+ +.|+.++|.+..|......+.+++.++++.|+++|.++.+|+++...
T Consensus 153 ~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-------- 224 (415)
T cd01297 153 VMGLDAREATEEELAKMRELLREALEAGALGISTGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEGD-------- 224 (415)
T ss_pred HhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECcccc--------
Confidence 234456677777652 47999999877664323568999999999999999999999987641
Q ss_pred HHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHH---------HHHHHHHHHcCCcEEEecccccc
Q 009282 249 IELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA---------MEEIAKARKAGQRVIGEPVVSGL 319 (538)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~---------~~~i~~~~~~g~~v~~~~~~~~~ 319 (538)
.+.+.+.++++++...+.++++.|++.... .+.++++++.|+.|+++.+++++
T Consensus 225 ------------------~e~~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~ 286 (415)
T cd01297 225 ------------------SILEALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGA 286 (415)
T ss_pred ------------------cHHHHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCC
Confidence 234678899999999999999999998776 78888899999999999998655
Q ss_pred ccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHH
Q 009282 320 VLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (538)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~ 399 (538)
.+ ...++.+++. ..++++||+.+.+. +....+ + .+..
T Consensus 287 ~~---------------------------~~~~~~l~~~-~~~~i~SDh~~~~~--------~~~~~~----~---~~~~ 323 (415)
T cd01297 287 GS---------------------------EDDVRRIMAH-PVVMGGSDGGALGK--------PHPRSY----G---DFTR 323 (415)
T ss_pred Cc---------------------------HHHHHHHHcC-CCceeeeCCCcCCC--------CCcchh----C---CHHH
Confidence 43 1335666666 89999999987531 011111 1 1444
Q ss_pred HHHHhhhc-CCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEE
Q 009282 400 VWDTMVES-GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKV 478 (538)
Q Consensus 400 ~~~~~~~~-~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 478 (538)
.+...+.. +.+|++++++++|.|||+++|+. ++|+|++|+.|||||+|++.....+. +.++... ...|
T Consensus 324 ~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~-~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~--~~~v 392 (415)
T cd01297 324 VLGHYVRERKLLSLEEAVRKMTGLPARVFGLA-DRGRIAPGYRADIVVFDPDTLADRAT--------FTRPNQP--AEGI 392 (415)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHhCCC-CCceeCCCCCCCEEEEcccccccccc--------hhhhccC--CCCc
Confidence 44444433 35999999999999999999995 57999999999999999886544332 1122211 3469
Q ss_pred EEEEECCEEEEECCeeecc
Q 009282 479 EVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 479 ~~V~v~G~~V~~~~~~~~~ 497 (538)
.+||++|++||+++++++.
T Consensus 393 ~~viv~G~~v~~~~~~~~~ 411 (415)
T cd01297 393 EAVLVNGVPVVRDGAFTGA 411 (415)
T ss_pred eEEEECCEEEEECCEECCC
Confidence 9999999999999998864
No 33
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.5e-38 Score=329.11 Aligned_cols=380 Identities=21% Similarity=0.285 Sum_probs=245.9
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-CC--------
Q 009282 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------- 121 (538)
Q Consensus 54 ~~~i~n~~vv~~~~---~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~-------- 121 (538)
+++|+|++|+++++ .++++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+...+. +.
T Consensus 2 ~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~~~~~ 81 (445)
T PRK07228 2 TILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLEDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDLELLD 81 (445)
T ss_pred eEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccCcCCeEEeCCCCEEecCEEecccCCccccceeccCCCCHHH
Confidence 58999999999874 4689999999999999986543336789999999999999999999986521 11
Q ss_pred ------------CChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-------eee
Q 009282 122 ------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-------AIT 178 (538)
Q Consensus 122 ------------~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 178 (538)
.+++.... ....++++||||++|+.... .....+++..+.+.+......+.. ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~--~~~~~~~a~~~~g~r~~~~~~~~~~~~~~p~~~~ 159 (445)
T PRK07228 82 WLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVH--HTDSAFEAAGESGIRAVLGKVMMDYGDDVPEGLQ 159 (445)
T ss_pred HHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEcccccc--ChHHHHHHHHHcCCeEEEecceecCCcCCCcccc
Confidence 11222221 23345799999999986432 123445555555544322211110 001
Q ss_pred cCChhhHHHHHHHHHHc-CCc--EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCC
Q 009282 179 KWDEVVSDEMEVMVKEK-GIN--SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGIT 254 (538)
Q Consensus 179 ~~~~~~~~~~~~~~~~~-g~~--~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~ 254 (538)
....+.+++...+.+.. |.. .+...+.+.....++.+.++++++.|+++|+++++|+.+. .......+ ..|..
T Consensus 160 ~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~---~~g~~ 236 (445)
T PRK07228 160 EDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEE---ETGMR 236 (445)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCCC
Confidence 11123344444444332 332 3333344445556789999999999999999999999543 32221111 22322
Q ss_pred CcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc
Q 009282 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (538)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (538)
. ++ .+......+.++++.|+...++ +.++++++.|+.++.||... +..+
T Consensus 237 ~----------------~~-~l~~~g~~~~~~~l~H~~~~~~-~~~~~~~~~g~~v~~~P~~~-------------~~~~ 285 (445)
T PRK07228 237 N----------------IH-YLDEVGLTGEDLILAHCVWLDE-EEREILAETGTHVTHCPSSN-------------LKLA 285 (445)
T ss_pred H----------------HH-HHHHCCCCCCCcEEEEEecCCH-HHHHHHHHcCCeEEEChHHh-------------hhcc
Confidence 1 11 1111223467889999998776 78899999999998887641 1111
Q ss_pred cceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCH
Q 009282 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISV 412 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~ 412 (538)
.. ..+++++++.|+++++|||+.+.+.... +|. +..+...+.+.. ....+++
T Consensus 286 ~~------------~~p~~~~~~~Gv~v~lGtD~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~s~ 339 (445)
T PRK07228 286 SG------------IAPVPDLLERGINVALGADGAPCNNTLD-----PFT---------EMRQAALIQKVDRLGPTAMPA 339 (445)
T ss_pred cc------------cCcHHHHHHCCCeEEEcCCCCccCCCcc-----HHH---------HHHHHHHHhhhccCCCcccCH
Confidence 11 1338999999999999999865432211 111 222222222221 1135999
Q ss_pred HHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECC
Q 009282 413 TDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 492 (538)
Q Consensus 413 ~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~ 492 (538)
+++|+++|.|||+++|+++++|+|++||.|||||+|.+.+...+.+. .++.....+... ..+|..||++|++||++|
T Consensus 340 ~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~-~~~~~~~~~~~~--~~~v~~v~v~G~~v~~~g 416 (445)
T PRK07228 340 RTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHG-VDVLSHLVYAAH--GSDVETTMVDGKIVMEDG 416 (445)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcc-cCHHHHhheeCC--CCCeeEEEECCEEEEECC
Confidence 99999999999999999888999999999999999998765544320 011111112221 357999999999999999
Q ss_pred eeeccC
Q 009282 493 ELNVVP 498 (538)
Q Consensus 493 ~~~~~~ 498 (538)
+++..+
T Consensus 417 ~~~~~d 422 (445)
T PRK07228 417 ELTTID 422 (445)
T ss_pred eEccCC
Confidence 999876
No 34
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=1.2e-38 Score=328.05 Aligned_cols=372 Identities=27% Similarity=0.372 Sum_probs=243.5
Q ss_pred EEEECcEEEcCCC---ceeeeEEEeCCEEEEecCCCCCC--CCceEEecCCCeeeccccccccccccccC-C--------
Q 009282 55 ILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-------- 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~---~~~~~V~I~~grI~~Vg~~~~~~--~~~~vID~~G~~v~PGlID~H~H~~~~~~-~-------- 120 (538)
++|+|++|+++++ ..+++|+|+||||++|++..+.+ ++.++||++|++|+|||||+|+|+..+.. +
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~~ 80 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPAYPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPLM 80 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCccccccCCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCHH
Confidence 4799999999852 46899999999999999865542 46889999999999999999999875311 1
Q ss_pred ------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee---cCC
Q 009282 121 ------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWD 181 (538)
Q Consensus 121 ------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 181 (538)
..++++++.. +..++++||||++|+..... ....+.....+.+..+...+..... ...
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~ 157 (411)
T cd01298 81 EWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP---DAVAEAAEELGIRAVLGRGIMDLGTEDVEET 157 (411)
T ss_pred HHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccch---HHHHHHHHHhCCeEEEEcceecCCCcccccH
Confidence 1223444332 34457899999999865432 2333334344444333222211111 111
Q ss_pred hhhHHHHHHHHHH---cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCcc
Q 009282 182 EVVSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 182 ~~~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~ 257 (538)
.+..++...+.++ .|.+.+|+++.+++...++.+.+.++++.|+++|+++.+|+.+. .......+ ..|...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~~~~~-- 232 (411)
T cd01298 158 EEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLE---KYGKRP-- 232 (411)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH---HhCCCH--
Confidence 2334444444422 24678898888776667789999999999999999999998443 32222221 122210
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccce
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
++.+. .....+.++.+.|+....+ +.++++++.|+.++.||.... ..+..
T Consensus 233 --------------~~~~~-~~~~~~~~~~i~H~~~l~~-~~~~~l~~~gi~~~~~p~~~~-------------~~~~~- 282 (411)
T cd01298 233 --------------VEYLE-ELGLLGPDVVLAHCVWLTD-EEIELLAETGTGVAHNPASNM-------------KLASG- 282 (411)
T ss_pred --------------HHHHH-HcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEEChHHhh-------------hhhhC-
Confidence 11111 1223356778999998876 889999999998887765311 11111
Q ss_pred eecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh--cCCCCHHHH
Q 009282 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISVTDY 415 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~--~~~ls~~ea 415 (538)
. .+++.++++|+++++|||+....... +++. +..+......... ..+++++++
T Consensus 283 --~---------~~~~~~~~~Gv~~~~GsD~~~~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~~~~~a 337 (411)
T cd01298 283 --I---------APVPEMLEAGVNVGLGTDGAASNNNL-----DMFE---------EMRLAALLQKLAHGDPTALPAEEA 337 (411)
T ss_pred --C---------CCHHHHHHCCCcEEEeCCCCccCCCc-----CHHH---------HHHHHHHHhccccCCCCcCCHHHH
Confidence 1 22789999999999999976432111 0111 1222222211111 125999999
Q ss_pred HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 416 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 416 l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
|+++|.|||+++|++ ++|+|++||.|||||+|.+.++.++.+++.+.. .+... ..+|..||++|++||++|+++
T Consensus 338 l~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~---~~~~~--~~~v~~v~~~G~~v~~~~~~~ 411 (411)
T cd01298 338 LEMATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPISHL---VYSAN--GGDVDTVIVNGRVVMEDGELL 411 (411)
T ss_pred HHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchhhHh---eEecC--CCCeeEEEECCEEEEECCEeC
Confidence 999999999999996 789999999999999999877666544433222 11111 458999999999999999875
No 35
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.7e-38 Score=325.24 Aligned_cols=378 Identities=19% Similarity=0.211 Sum_probs=250.5
Q ss_pred cccEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-CC--
Q 009282 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-- 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~-- 121 (538)
+.+++|+|+.|++++. .++++|+|+||+|++||+.... +++.++||++|++|+|||||+|+|+..... +.
T Consensus 6 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~~ 85 (443)
T PRK09045 6 PVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLAD 85 (443)
T ss_pred cccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhccC
Confidence 4589999999999763 2688999999999999986433 235789999999999999999999986521 10
Q ss_pred -------------------CChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-e-
Q 009282 122 -------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-A- 176 (538)
Q Consensus 122 -------------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 176 (538)
.+++..+ .....++++||||++|+... .....+...+.+.+..+...... +
T Consensus 86 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~----~~~~~~~~~~~G~R~~~~~~~~~~~~ 161 (443)
T PRK09045 86 DLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF----PEAAAEAAHQAGMRAQIGMPVLDFPT 161 (443)
T ss_pred CCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecccc----HHHHHHHHHHcCCeEEEecccccCCC
Confidence 1122221 22345689999999987421 12234444444444333222111 0
Q ss_pred -eecCChhhHHHHHHHHH-HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHHcCC
Q 009282 177 -ITKWDEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGI 253 (538)
Q Consensus 177 -~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~~~~~~~~~~~~~g~ 253 (538)
.....++.+++...+.+ ..+.+.+++.+.+++.+.++.+.++++++.|+++|+++.+|+.. ..+....+ ...|.
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~---~~~g~ 238 (443)
T PRK09045 162 AWASDADEYLAKGLELHDQWRHHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSL---KQHGQ 238 (443)
T ss_pred ccccCHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHH---HHhCC
Confidence 01111233333333332 24567788888888888889999999999999999999999953 33322222 22332
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (538)
. .++.+. .....+.++.+.|+...++ +.++++++.|+.++.||... +..
T Consensus 239 ~----------------~~~~l~-~~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~i~~~P~~~-------------~~~ 287 (443)
T PRK09045 239 R----------------PLARLA-RLGLLGPRLIAVHMTQLTD-AEIALLAETGCSVVHCPESN-------------LKL 287 (443)
T ss_pred C----------------HHHHHH-HcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEECHHHH-------------hhh
Confidence 1 122222 2345567888999998876 88999999999998887641 111
Q ss_pred ccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCC
Q 009282 334 AAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQIS 411 (538)
Q Consensus 334 ~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls 411 (538)
+.. ..+++.+++.|+++++|||+.+.+...+ ++. ++.+...+.+.. ...+++
T Consensus 288 ~~~------------~~~~~~l~~~Gv~v~lGtD~~~~~~~~~-----~~~---------~~~~a~~~~~~~~~~~~~~~ 341 (443)
T PRK09045 288 ASG------------FCPVAKLLQAGVNVALGTDGAASNNDLD-----LFG---------EMRTAALLAKAVAGDATALP 341 (443)
T ss_pred ccC------------CCcHHHHHHCCCeEEEecCCCCCCCCcc-----HHH---------HHHHHHHHHhhccCCCCcCC
Confidence 111 1237899999999999999764322211 111 222222222222 134599
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 412 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 412 ~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++++|+++|.|||+++|+++++|+|++||.||||++|.+++...+.. ++....++... ..+|..||++|++||++
T Consensus 342 ~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~~---~~~~~lv~~~~--~~~v~~v~v~G~~v~~~ 416 (443)
T PRK09045 342 AHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPVY---DPVSQLVYAAG--REQVSHVWVAGKQLLDD 416 (443)
T ss_pred HHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCcc---ChHhHhhEeCC--CCCccEEEECCEEEEEC
Confidence 99999999999999999988899999999999999998876332211 11112233322 45899999999999999
Q ss_pred CeeeccC
Q 009282 492 DELNVVP 498 (538)
Q Consensus 492 ~~~~~~~ 498 (538)
|++++.|
T Consensus 417 g~~~~~d 423 (443)
T PRK09045 417 RELTTLD 423 (443)
T ss_pred CcCCCCC
Confidence 9999987
No 36
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=1.2e-37 Score=319.81 Aligned_cols=376 Identities=22% Similarity=0.299 Sum_probs=246.3
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C---------
Q 009282 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (538)
Q Consensus 54 ~~~i~n~~vv~~~~---~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~--------- 120 (538)
+++|+|++|++++. ..+++|+|+||+|++||+... .+.++||++|++|+|||||+|+|++.... +
T Consensus 2 ~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~--~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~~l~~ 79 (418)
T PRK06380 2 SILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE--EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDVDLEE 79 (418)
T ss_pred eEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC--CCCEEEECCCCEEccCEEeeccCCCccccCCcccCCCHHH
Confidence 47999999998763 358899999999999998543 24689999999999999999999986621 1
Q ss_pred ----------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-eecCChhhH
Q 009282 121 ----------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVS 185 (538)
Q Consensus 121 ----------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 185 (538)
..++++++. ....++++||||++|+... .....++..+.+.+.++.+..... .........
T Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~----~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~~ 155 (418)
T PRK06380 80 FLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS----EDIIAKAAEELGIRAFLSWAVLDEEITTQKGDPL 155 (418)
T ss_pred HHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC----hHHHHHHHHHhCCeEEEecccccCCcccccchHH
Confidence 123333322 2345689999999998532 123344555555554443322111 000111122
Q ss_pred HHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC
Q 009282 186 DEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (538)
Q Consensus 186 ~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (538)
.+...+.++ .+...+...+.+++...++.+.++++++.|+++|+++++|+.+... +......+.|...
T Consensus 156 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~--------- 224 (418)
T PRK06380 156 NNAENFIREHRNEELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRK--EVYDHVKRTGERP--------- 224 (418)
T ss_pred HHHHHHHHHhcCCCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHH--HHHHHHHHhCCCH---------
Confidence 233333322 2234466666777888889999999999999999999999965421 2222333445421
Q ss_pred chHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCC
Q 009282 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR 344 (538)
Q Consensus 265 ~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 344 (538)
++.+ ......+.++.+.|+.+.+. +.++++++.|+.++.||.+ ++..+.. ..
T Consensus 225 -------ie~~-~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~s-------------n~~l~~~--g~---- 276 (418)
T PRK06380 225 -------VEHL-EKIGFLNSKLIAAHCVWATY-HEIKLLSKNGVKVSWNSVS-------------NFKLGTG--GS---- 276 (418)
T ss_pred -------HHHH-HHCCCCCCCeEEEEeecCCH-HHHHHHHHcCCEEEECHHH-------------HHhhccC--CC----
Confidence 2221 22234567888999998876 8899999999999988875 2211110 01
Q ss_pred CcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCHHHHHHHHhHh
Q 009282 345 ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYVRLTSTE 422 (538)
Q Consensus 345 ~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~~eal~~aT~~ 422 (538)
.+++++++.|+++++|||....+....+ |. ++.+.....+.. ....++++++|+++|.|
T Consensus 277 -----~p~~~~~~~Gv~v~lGTD~~~~~~~~d~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~ 337 (418)
T PRK06380 277 -----PPIPEMLDNGINVTIGTDSNGSNNSLDM-----FE---------AMKFSALSVKNERWDASIIKAQEILDFATIN 337 (418)
T ss_pred -----CcHHHHHHCCCeEEEcCCCCcCCCCcCH-----HH---------HHHHHHHHhhhccCCCCcCCHHHHHHHHHHH
Confidence 2288999999999999997533222111 11 222221111111 12248999999999999
Q ss_pred HHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 423 CARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 423 ~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
+|++||+ +.|+|++||+||||++|.+.+...+.. ..++.....+.+. ..+|..||++|++|+++|++++.|
T Consensus 338 gA~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~p~~-~~~~~~~lv~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 408 (418)
T PRK06380 338 AAKALEL--NAGSIEVGKLADLVILDARAPNMIPTR-KNNIVSNIVYSLN--PLNVDHVIVNGKILKENGRLNGFN 408 (418)
T ss_pred HHHHhCC--CCCccCCCccCCEEEEeCCCCccCCCC-ccChHHheeecCC--CCceeEEEECCEEEEECCeECccC
Confidence 9999999 379999999999999998866554421 1112222223322 357999999999999999999987
No 37
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=4.8e-37 Score=302.21 Aligned_cols=339 Identities=24% Similarity=0.342 Sum_probs=269.2
Q ss_pred CeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeee
Q 009282 101 KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAIT 178 (538)
Q Consensus 101 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 178 (538)
.+|+|||||.|+|+..+ +....+++.++.++++++||||++||....+. ...+.++...+... ...++++++....
T Consensus 2 ~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~ 79 (344)
T cd01316 2 TIRLPGLIDVHVHLREP--GATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKARCDYAFSIGAT 79 (344)
T ss_pred eEEeCCeEEeeeccCCC--CcCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeec
Confidence 47999999999999988 77789999999999999999999999654332 45666666666554 4688999887665
Q ss_pred cCChhhHHHHHHHHHHcCCcEEEEEeeeCCCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 179 ~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
..+.+ ++.++. . ...++|.|..+.... ..+..........++..+.++..|++..
T Consensus 80 ~~~~~---~~~~l~-~-~~~g~k~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~e~~------------------- 135 (344)
T cd01316 80 STNAA---TVGELA-S-EAVGLKFYLNETFSTLILDKITAWASHFNAWPSTKPIVTHAKSQ------------------- 135 (344)
T ss_pred CCCHH---HHHHHH-h-ccCeEEEEECCCCCCCccchHHHHHHHHHhcccCCCeEEehhhH-------------------
Confidence 54433 233333 2 256788876432111 0111111122233444466777666432
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccce
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
.+.+++.+++..+.++|+.|+++...++.++..++.|+.|+++.++|||.++++.+.. ..+
T Consensus 136 -------------~~~~~l~la~~~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~------~~~ 196 (344)
T cd01316 136 -------------TLAAVLLLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR------GQY 196 (344)
T ss_pred -------------HHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc------CCc
Confidence 3455678888899999999999999999999999999999999999999999987643 367
Q ss_pred eecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
+++||+|..++++++|+++. ...+++|||.|+....|.. + ..|+|++|++..++..+. ++..+++++.++++
T Consensus 197 k~~PPLR~~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~~---~--~a~~G~~g~e~~lpl~~~-~v~~~~i~l~~l~~ 268 (344)
T cd01316 197 EVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEKTG---N--KPPPGFPGVETSLPLLLT-AVHEGRLTIEDIVD 268 (344)
T ss_pred eeCCCCcCHHHHHHHHHHHh--cCCEEEcCCCCCCHHHhcC---C--CCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHH
Confidence 89999999999999999995 4789999999998776642 2 789999999999999995 78888899999999
Q ss_pred HHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 418 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 418 ~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
..+.|||++||+.. + .+|||++|++..|.++.+.+.+...|+||+|+.+.++|..||++|++||++|+++..
T Consensus 269 ~~s~nPAk~~gl~~-------~-~~~lvi~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~ti~rG~~v~~~g~~~~~ 340 (344)
T cd01316 269 RLHTNPKRIFNLPP-------Q-SDTYVEVDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAFIDGEIVAP 340 (344)
T ss_pred HHHHhHHHHhCCCC-------C-CCCEEEEeCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEECCEEccC
Confidence 99999999999943 2 347999999999999999999999999999999999999999999999999998765
Q ss_pred CCC
Q 009282 498 PGS 500 (538)
Q Consensus 498 ~~~ 500 (538)
.+.
T Consensus 341 ~~~ 343 (344)
T cd01316 341 PGF 343 (344)
T ss_pred CCC
Confidence 543
No 38
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=322.98 Aligned_cols=373 Identities=21% Similarity=0.274 Sum_probs=239.7
Q ss_pred ccEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC---------
Q 009282 53 SKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM--------- 119 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~--------- 119 (538)
.+++|+|++|+++++ ..+++|+|+||+|++||+..+.+ +.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~~-~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~ 80 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEAP-DAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGADWTL 80 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEecCEEeeeeccchhhhccccCCCcH
Confidence 457899999998653 26889999999999999865433 5689999999999999999999864311
Q ss_pred ------------CCCChhhHH----HHHHHHHhCCcEEEecccCCCC--CCHHHHHHHHHHHhcccceeeeeeeeeec--
Q 009282 120 ------------GSETIDDFF----SGQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKKAKNSCMDYGFHMAITK-- 179 (538)
Q Consensus 120 ------------~~~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 179 (538)
...++++.+ .....++++||||++++..... ......++...+.+.+..+..+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~~~~~~ 160 (449)
T PRK08204 81 QTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGPSPYWP 160 (449)
T ss_pred HHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCCCCCCC
Confidence 011222221 2334678999999999764332 12334455555555443322221111010
Q ss_pred --CChhhHHHHHHHHHH--cCCc-EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 180 --WDEVVSDEMEVMVKE--KGIN-SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 180 --~~~~~~~~~~~~~~~--~g~~-~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
...+...+...+.++ .+.+ .+......++....+++.++++++.|+++|+++.+|+.+.... .+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~---------~~~- 230 (449)
T PRK08204 161 FDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG---------ATP- 230 (449)
T ss_pred cchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---------cCC-
Confidence 111223333333321 2222 3344444555566678999999999999999999999543110 000
Q ss_pred CcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc
Q 009282 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (538)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (538)
..++.+.+ ....+.++.+.|+...++ +.++++++.|+.+++||... +..+
T Consensus 231 ---------------~~~~~l~~-~g~~~~~~~i~H~~~~~~-~~~~~la~~g~~v~~~P~~~-------------~~~g 280 (449)
T PRK08204 231 ---------------RGVEQLHD-AGLLGPDLNLVHGNDLSD-DELKLLADSGGSFSVTPEIE-------------MMMG 280 (449)
T ss_pred ---------------CHHHHHHH-CCCCCCCeEEEecCCCCH-HHHHHHHHcCCCEEEChHHH-------------hhhc
Confidence 01111111 234466788999999887 88999999999999887641 1111
Q ss_pred cceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh----------
Q 009282 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM---------- 404 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~---------- 404 (538)
..+ .++..++++|+++++|||..+.+.. ++|. ++......+..
T Consensus 281 ~~~------------~~~~~~~~~Gv~v~lGtD~~~~~~~------~~~~---------~~~~a~~~~~~~~~~~~~~~~ 333 (449)
T PRK08204 281 HGY------------PVTGRLLAHGVRPSLGVDVVTSTGG------DMFT---------QMRFALQAERARDNAVHLREG 333 (449)
T ss_pred CCC------------CcHHHHHhcCCceeeccccCCCCCc------CHHH---------HHHHHHHHHHhhccccccccc
Confidence 111 2278899999999999997543221 1111 11221111111
Q ss_pred ---hhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 405 ---VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 405 ---~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
....++++.++|+++|.|+|+++|+++++|+|++||.|||||+|.+.+...+.. ++.....+.+. ..+|..|
T Consensus 334 ~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p~~---dp~~~lv~~~~--~~~v~~v 408 (449)
T PRK08204 334 GMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAPVH---DPVGAVVQSAH--PGNVDSV 408 (449)
T ss_pred ccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccCCc---ChhhhheeccC--CCCceEE
Confidence 123569999999999999999999988899999999999999998876443321 11111122221 3689999
Q ss_pred EECCEEEEECCeeeccC
Q 009282 482 IAGGRVVWENDELNVVP 498 (538)
Q Consensus 482 ~v~G~~V~~~~~~~~~~ 498 (538)
|++|++|++++++++.|
T Consensus 409 ~v~G~~v~~~~~~~~~d 425 (449)
T PRK08204 409 MVAGRAVKRNGKLLGVD 425 (449)
T ss_pred EECCEEEEECCEeccCC
Confidence 99999999999999987
No 39
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=322.77 Aligned_cols=375 Identities=18% Similarity=0.201 Sum_probs=250.5
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccC-CC-------
Q 009282 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS------- 121 (538)
Q Consensus 55 ~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~------- 121 (538)
+++.|+.|+++++ ..+++|+|+||+|++|++..+.+ ++.++||+.|++|+|||||+|+|++.... +.
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~~~ 83 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQDAE 83 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCCCCCeEEeCCCCEEecceEeccccccchhcccccccCCCc
Confidence 4555578999875 35789999999999999975533 35789999999999999999999987522 11
Q ss_pred --------------CChhhHHH----HHHHHHhCCcEEEecccCCCC--C--CHHHHHHHHHHHhcccceeeeeee----
Q 009282 122 --------------ETIDDFFS----GQAAALAGGTTMHIDFVIPIN--G--SLTAGFEAYEKKAKNSCMDYGFHM---- 175 (538)
Q Consensus 122 --------------~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~---- 175 (538)
.++++++. ....++++||||++|+..... . .....+++..+.+.+..+......
T Consensus 84 ~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~ 163 (451)
T PRK08203 84 LFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGES 163 (451)
T ss_pred HHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEecceeecCCc
Confidence 12222222 234568899999999753211 1 245667777777766443322110
Q ss_pred --eee-c----CChhhHHHHHHHHHHc----CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHH
Q 009282 176 --AIT-K----WDEVVSDEMEVMVKEK----GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFE 243 (538)
Q Consensus 176 --~~~-~----~~~~~~~~~~~~~~~~----g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~~~~~ 243 (538)
... . ..++.++...++.++. ..+.+++.+.+++.+.++.+.++++++.|+++|+++++|+.+ ......
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 243 (451)
T PRK08203 164 DGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETLDEEAF 243 (451)
T ss_pred cCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Confidence 000 0 1123344444444221 125677777777777889999999999999999999999843 332222
Q ss_pred HHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCc
Q 009282 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (538)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~ 323 (538)
.. ...|... ++.+ ......+.++.+.|+...++ +.++++++.|+.++.||...
T Consensus 244 ~~---~~~g~~~----------------~~~l-~~~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~~~------ 296 (451)
T PRK08203 244 CL---ERFGMRP----------------VDYL-EDLGWLGPDVWLAHCVHLDD-AEIARLARTGTGVAHCPCSN------ 296 (451)
T ss_pred HH---HHhCCCH----------------HHHH-HHcCCCCCCeEEEEEeCCCH-HHHHHHHhcCCeEEECcHHh------
Confidence 22 1233321 2222 22244567888999998887 88999999999998887642
Q ss_pred ccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHH
Q 009282 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~ 403 (538)
+..+... .+++.+++.|+++++|||+...+.... ++. ++.+......
T Consensus 297 -------~~l~~~~------------~~~~~~~~~Gv~v~lGtD~~~~~~~~~-----~~~---------~~~~~~~~~~ 343 (451)
T PRK08203 297 -------MRLASGI------------APVRELRAAGVPVGLGVDGSASNDGSN-----LIG---------EARQALLLQR 343 (451)
T ss_pred -------hhhccCC------------CCHHHHHHCCCeEEEecCCCccCCCcC-----HHH---------HHHHHHHHhh
Confidence 1111111 227899999999999999754322111 111 2222222222
Q ss_pred hhh-cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEE--eeEEEE
Q 009282 404 MVE-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV--KGKVEV 480 (538)
Q Consensus 404 ~~~-~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~ 480 (538)
... ...+++.++|+++|.|||+++|++ .+|+|++||.|||||+|.+.+...+ .+.|+.+... ..+|..
T Consensus 344 ~~~~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~--------~~~p~~~l~~~~~~~v~~ 414 (451)
T PRK08203 344 LRYGPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFDLDELRFAG--------AHDPVAALVLCGPPRADR 414 (451)
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEcCCccccCC--------ccChHHHHHccCCCCccE
Confidence 221 235999999999999999999996 7899999999999999988763321 1345543322 358999
Q ss_pred EEECCEEEEECCeeeccC
Q 009282 481 TIAGGRVVWENDELNVVP 498 (538)
Q Consensus 481 V~v~G~~V~~~~~~~~~~ 498 (538)
||++|++||++|++++.|
T Consensus 415 v~v~G~~v~~~~~~~~~d 432 (451)
T PRK08203 415 VMVGGRWVVRDGQLTTLD 432 (451)
T ss_pred EEECCEEEEECCcccCCC
Confidence 999999999999999876
No 40
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=4.9e-37 Score=316.79 Aligned_cols=375 Identities=20% Similarity=0.246 Sum_probs=247.1
Q ss_pred EEEECcEEEcCCC---c-eeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-C------
Q 009282 55 ILIKGGTVVNAHH---Q-QIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------ 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~---~-~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~------ 120 (538)
++|+|++|+++++ . .+++|+|+||+|++||+.... .++.++||++|++|+|||||+|+|++.... +
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~ 81 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP 81 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence 6899999998653 2 478999999999999964221 235689999999999999999999875421 1
Q ss_pred ------------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccceeeeeee
Q 009282 121 ------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHM 175 (538)
Q Consensus 121 ------------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
..++++++.. ...++++||||++|+...... ......++..+.+.+..+.+.+..
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~d 161 (442)
T PRK07203 82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYETSD 161 (442)
T ss_pred CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccccc
Confidence 0122333222 245689999999998532211 222334444445544433322211
Q ss_pred ee-ecCChhhHHHHHHHHHH-cC--CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHH
Q 009282 176 AI-TKWDEVVSDEMEVMVKE-KG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIE 250 (538)
Q Consensus 176 ~~-~~~~~~~~~~~~~~~~~-~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~~~~ 250 (538)
.. .....+.+++..++.+. .+ ...+...+.+++.+.++.+.++++.+.|+++|+++++|.. ...+.....+ .
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~~~~---~ 238 (442)
T PRK07203 162 RDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSDSHK---K 238 (442)
T ss_pred CCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHHHHH---H
Confidence 10 01112223333333322 12 2256677778888888999999999999999999999994 4444333332 2
Q ss_pred cCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
+|... ++ .+.....++.++.+.||.+.++ ++++.+++.|+.|++||.+ |
T Consensus 239 ~g~~~----------------v~-~l~~~Gll~~~~~~~H~~~~~~-~d~~~la~~g~~v~~~P~s-------------n 287 (442)
T PRK07203 239 YGKDI----------------VE-RLADFGLLGEKTLAAHCIYLSD-EEIDLLKETDTFVVHNPES-------------N 287 (442)
T ss_pred cCCCH----------------HH-HHHhCCCCCCCcEEEEeecCCH-HHHHHHHhcCCeEEECchh-------------h
Confidence 34321 11 2222345677889999999887 8899999999999999986 3
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh-hcCC
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV-ESGQ 409 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~ 409 (538)
+..+.+. .++++++++|+++++|||+...+ .|. ++.+...+++.. ....
T Consensus 288 ~~l~~g~------------~p~~~~~~~Gv~v~lGtD~~~~d---------~~~---------~~~~a~~~~~~~~~~~~ 337 (442)
T PRK07203 288 MGNAVGY------------NPVLEMIKNGILLGLGTDGYTSD---------MFE---------SYKVANFKHKHAGGDPN 337 (442)
T ss_pred hhcccCC------------CCHHHHHHCCCeEEEcCCCCCcc---------HHH---------HHHHHHHHhccccCCCC
Confidence 3333332 22889999999999999975321 111 233333332221 1112
Q ss_pred CCHHHHHHHHhHhHHHHcC--CCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 410 ISVTDYVRLTSTECARIFN--VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 410 ls~~eal~~aT~~~A~~lg--~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
++.+++++|+|.+||+++| ++++.|+|++||.||||++|.+.+...+.. ++.....|.+. ...|..||++|++
T Consensus 338 ~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~---~~~~~~v~~~~--~~~v~~v~v~G~~ 412 (442)
T PRK07203 338 VGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDYNPPTPLNED---NINGHILFGMN--GGSVDTTIVNGKV 412 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCcc---ccccceEeecC--CCceEEEEECCEE
Confidence 4578999999999999999 456799999999999999998766444321 12222334332 4689999999999
Q ss_pred EEECCeeeccC
Q 009282 488 VWENDELNVVP 498 (538)
Q Consensus 488 V~~~~~~~~~~ 498 (538)
|+++|++++.|
T Consensus 413 v~~~g~~~~~d 423 (442)
T PRK07203 413 VMEDRKFLNFD 423 (442)
T ss_pred EEECCcccccC
Confidence 99999999987
No 41
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=5e-37 Score=308.39 Aligned_cols=359 Identities=18% Similarity=0.205 Sum_probs=248.8
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccc----ccCCC--CChhh
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAM----EFMGS--ETIDD 126 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~----~~~~~--~~~~~ 126 (538)
++++|+|++|++.+...+++|+|+||||++|++... ...++||++|++|+|||||+|+|... +..+. ...++
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~--~~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~~ 79 (383)
T PRK15446 2 MEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS--ALPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWPADAA 79 (383)
T ss_pred ccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccchHHH
Confidence 568999999999876668999999999999998543 24578999999999999999996542 21111 22277
Q ss_pred HHHHHHHHHhCCcEEEecccCCC--C------CCHHHHH-HHHH--HHhcccceeeeeeeeeecCChhhHHHHHHHHHHc
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPI--N------GSLTAGF-EAYE--KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~--~------~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (538)
+.++.++++++||||++|+.... . ......+ +... ....+..+++++|.....++.+.++++..+. +.
T Consensus 80 ~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~-~~ 158 (383)
T PRK15446 80 LAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALL-AH 158 (383)
T ss_pred HHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHh-cC
Confidence 88899999999999999974221 1 1122122 2222 2235678999999999888888888999987 78
Q ss_pred CCcEEEEEeeeC-CCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 196 GINSFKFFMAYK-GSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 196 g~~~ik~~~~~~-~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
|...+|.|++.. +.. ....+.+++.. +.+.| ..|++.......... +|...+.+++.
T Consensus 159 g~~~~k~fm~~~p~~~~~~~~~~~~~~~--~~~~g---~~~~e~~~~~~~~~~----------------~~~~~~~e~i~ 217 (383)
T PRK15446 159 PRVDLVSLMDHTPGQRQFRDLEKYREYY--AGKYG---LSDEEFDAFVEERIA----------------LSARYAPPNRR 217 (383)
T ss_pred CCcCEEEEeCCCCccccccCHHHHHHHH--HhhcC---CCHHHHHHHHHHHHH----------------hHhhcCHHHHH
Confidence 999999998764 422 22445555555 44667 667776544322211 24445678899
Q ss_pred HHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee-ecC-CCCC--cccH
Q 009282 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV-MSP-PIRA--SGHN 349 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~r~--~~~~ 349 (538)
++++.++..|.++ ..|..... +.++.+++.|+.++-.+.. .+.... ....+.... ..| ++|. ....
T Consensus 218 ~~v~~A~~~g~~v-~sH~~~~~--~~i~~a~~~Gv~~~e~~~~------~e~~~~-~~~~g~~v~~~~p~~~r~~~~~~~ 287 (383)
T PRK15446 218 AIAALARARGIPL-ASHDDDTP--EHVAEAHALGVAIAEFPTT------LEAARA-ARALGMSVLMGAPNVVRGGSHSGN 287 (383)
T ss_pred HHHHHHHHCCCce-eecCCCCH--HHHHHHHHcCCceeeCCCc------HHHHHH-HHHCCCEEEeCCcccccCCcccch
Confidence 9999999999997 77874222 5677888889887632211 111100 000111111 112 2333 3456
Q ss_pred HHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 350 ~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
..++++++.|++++++||+.|.+. +...+ .+....++|++++|+++|.|||+++|+
T Consensus 288 ~~~~~~~~~Gv~~~lgSD~~p~~~-----------------------~~~~~-~~~~~~gls~~~al~~~T~npA~~lgl 343 (383)
T PRK15446 288 VSALDLAAAGLLDILSSDYYPASL-----------------------LDAAF-RLADDGGLDLPQAVALVTANPARAAGL 343 (383)
T ss_pred HhHHHHHHCCCcEEEEcCCChhhH-----------------------HHHHH-HHHHhcCCCHHHHHHHHhHHHHHHcCC
Confidence 788999999999999999864321 11122 233355799999999999999999999
Q ss_pred CCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECC
Q 009282 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 492 (538)
Q Consensus 430 ~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~ 492 (538)
++ .|+|++|+.|||+++|.++. ...+..||++|++||+.+
T Consensus 344 ~~-~G~I~~G~~ADlvv~d~~~~----------------------~~~v~~v~~~G~~v~~~~ 383 (383)
T PRK15446 344 DD-RGEIAPGKRADLVRVRRAGG----------------------LPVVRAVWRGGRRVFLAG 383 (383)
T ss_pred CC-CcCcCCCCcCCEEEEcCCCC----------------------CcchheEEECCEEEEeCC
Confidence 54 49999999999999997721 236889999999999753
No 42
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=2.1e-36 Score=310.88 Aligned_cols=375 Identities=21% Similarity=0.267 Sum_probs=252.1
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-C------
Q 009282 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------ 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~------ 120 (538)
++|+|++|++++. .++++|+|+||+|++||+..+. .++.++||++|++|+|||||+|+|+..... +
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~ 80 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIP 80 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCC
Confidence 3789999997653 2578999999999999975321 135688999999999999999999976521 1
Q ss_pred ------------------CCChhhHHHH----HHHHHhCCcEEEecccCCCC---CCHHHHHHHHHHHhcccceeeeeee
Q 009282 121 ------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPIN---GSLTAGFEAYEKKAKNSCMDYGFHM 175 (538)
Q Consensus 121 ------------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
..++++++.. ...++++||||++|+..... .......++..+.+.+..+.+.+..
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~ 160 (441)
T TIGR03314 81 PPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYETSD 160 (441)
T ss_pred CCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeeeec
Confidence 0122232222 23458999999999854322 1233445666666666555444322
Q ss_pred eee-cCChhhHHHHHHHHH-HcC--CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHH
Q 009282 176 AIT-KWDEVVSDEMEVMVK-EKG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIE 250 (538)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~-~~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~~~~ 250 (538)
... ....+.+.+..++.+ ..+ ...++..+.++..+.++++.++++.+.|+++++++++|+. +..+.....+ .
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~---~ 237 (441)
T TIGR03314 161 RDGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHH---K 237 (441)
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHH---H
Confidence 110 111222333333322 222 2357777888888889999999999999999999999994 4444333332 2
Q ss_pred cCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 251 ~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
+|... ++.+ .....++.++.+.||.+.++ ++++.+++.|+.|++||.+ |
T Consensus 238 ~g~~~----------------~~~l-~~~G~l~~~~~~~H~~~~~~-~d~~~la~~g~~v~~cP~s-------------n 286 (441)
T TIGR03314 238 YGKDI----------------VERL-ADFGLLGSKTLAAHCIYLSD-REIELLNETDTFVVHNPES-------------N 286 (441)
T ss_pred cCCCH----------------HHHH-HHCCCCCCCeEEEEEecCCH-HHHHHHHHcCCcEEECHHH-------------H
Confidence 33321 2222 22345678899999999887 8999999999999999986 4
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhc-CC
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVES-GQ 409 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~-~~ 409 (538)
+..+.++ +| +.+++++|++++||||+...+ .|. ++.+...+++.... ..
T Consensus 287 ~~l~~G~---~p---------~~~~~~~Gv~v~LGtD~~~~d---------~~~---------em~~a~~~~~~~~~~~~ 336 (441)
T TIGR03314 287 MGNAVGY---NP---------VLRMFKNGILLGLGTDGYTSD---------MFE---------SLKFANFKHKDAGGDLN 336 (441)
T ss_pred hhhccCC---CC---------HHHHHHCCCEEEEcCCCCCcC---------HHH---------HHHHHHHHhccccCCCC
Confidence 4433332 22 788999999999999975332 121 33443333332211 11
Q ss_pred CCHHHHHHHHhHhHHHHcC--CCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 410 ISVTDYVRLTSTECARIFN--VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 410 ls~~eal~~aT~~~A~~lg--~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
..+.++++++|.++|+++| ++.+.|+|++||.|||+++|.+.++.++..++.+ ...|... .++|..||++|++
T Consensus 337 ~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~~~---~lv~~~~--~~~V~~v~V~G~~ 411 (441)
T TIGR03314 337 AAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNING---HILFGMN--GGSVDSTMVNGKV 411 (441)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhccc---cceecCC--CCeeEEEEECCEE
Confidence 2457899999999999997 4567899999999999999988776665433222 2233322 5689999999999
Q ss_pred EEECCeeeccC
Q 009282 488 VWENDELNVVP 498 (538)
Q Consensus 488 V~~~~~~~~~~ 498 (538)
||+++++++.|
T Consensus 412 v~~~~~~~~~d 422 (441)
T TIGR03314 412 VMEDREFLHFD 422 (441)
T ss_pred EEECCcccccC
Confidence 99999999987
No 43
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.6e-36 Score=315.80 Aligned_cols=375 Identities=19% Similarity=0.195 Sum_probs=240.2
Q ss_pred cEEEECcEEEcCCC-----ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc-----cC----
Q 009282 54 KILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME-----FM---- 119 (538)
Q Consensus 54 ~~~i~n~~vv~~~~-----~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~-----~~---- 119 (538)
.++|+|++|++.++ .++++|+|+||+|++||+.... .+.++||+.|++|+|||||+|+|+... ..
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~-~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~~~~ 80 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG-EVDRVIDAGNALVGPGFIDLDALSDLDTTILGLDNGPG 80 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC-CCCeEEeCCCCEEecCEEeeecccchhhhhcccccchh
Confidence 47999999977553 2578999999999999985432 246899999999999999999997421 00
Q ss_pred ---C--------------CCChhhHH----HHHHHHHhCCcEEEecccCCCC---C----CHHHHHHHHHHHhcccceee
Q 009282 120 ---G--------------SETIDDFF----SGQAAALAGGTTMHIDFVIPIN---G----SLTAGFEAYEKKAKNSCMDY 171 (538)
Q Consensus 120 ---~--------------~~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~---~----~~~~~~~~~~~~~~~~~~~~ 171 (538)
+ ..++++++ ..+..++++||||++|+..... . .....+++..+.+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~ 160 (488)
T PRK06151 81 WAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLGP 160 (488)
T ss_pred HHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEEecc
Confidence 0 12233332 2345568999999998743211 1 13444555555554432221
Q ss_pred eeeee-----e-----ecC----ChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEE
Q 009282 172 GFHMA-----I-----TKW----DEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (538)
Q Consensus 172 ~~~~~-----~-----~~~----~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (538)
.+... . ... ..+.+.+..++.+ ..|.+.+|....++..+.++.+.+.++++.|+++|+++.+|
T Consensus 161 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H 240 (488)
T PRK06151 161 AYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRLH 240 (488)
T ss_pred hhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 11000 0 000 1112233333322 34667888888877777889999999999999999999999
Q ss_pred cC-ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHH--------HHHHHHHH
Q 009282 235 AE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM--------EEIAKARK 305 (538)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~--------~~i~~~~~ 305 (538)
+. +..+.....+ .+|... ++. +......+.++.+.|+...++. ++++++++
T Consensus 241 ~~e~~~~~~~~~~---~~g~~~----------------~~~-~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~ 300 (488)
T PRK06151 241 CAQGVLEVETVRR---LHGTTP----------------LEW-LADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAE 300 (488)
T ss_pred ECCchHHHHHHHH---HcCCCH----------------HHH-HHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHh
Confidence 94 4433222221 223211 111 1112334667888998876531 67889999
Q ss_pred cCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCccc
Q 009282 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (538)
Q Consensus 306 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~ 385 (538)
.|+.+++||... ...+.. ..++..++++|+++++|||..+.+ +|.
T Consensus 301 ~g~~v~~~P~~~-------------~~~g~~------------~~p~~~l~~~Gv~v~lGtD~~~~~---------~~~- 345 (488)
T PRK06151 301 HGVSIVHCPLVS-------------ARHGSA------------LNSFDRYREAGINLALGTDTFPPD---------MVM- 345 (488)
T ss_pred cCCEEEECchhh-------------hhhccc------------cccHHHHHHCCCcEEEECCCCCcc---------HHH-
Confidence 999998887531 111111 123789999999999999964321 111
Q ss_pred CCCCCcchhhhHHHHHHHhhh--cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCC
Q 009282 386 IPNGVNGIEERMHLVWDTMVE--SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSR 463 (538)
Q Consensus 386 ~~~g~~g~~~~~~~~~~~~~~--~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~ 463 (538)
+.........+.. ...++++++|+++|.|||+++|+++ +|+|++||.|||||+|.+.+...+. .++
T Consensus 346 --------~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~~---~d~ 413 (488)
T PRK06151 346 --------NMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGPV---FDP 413 (488)
T ss_pred --------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCCc---cCH
Confidence 1222222222221 1238999999999999999999965 8999999999999999876533321 111
Q ss_pred CCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 464 LDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 464 ~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
.....+.+. ..+|..||++|++||++|+++..|
T Consensus 414 ~~~lv~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 446 (488)
T PRK06151 414 IRTLVTGGS--GRDVRAVFVDGRVVMEDGRLPGVD 446 (488)
T ss_pred HHHHHhhCC--CCCccEEEECCEEEEECCeecCCC
Confidence 111222222 347999999999999999999987
No 44
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.9e-36 Score=308.40 Aligned_cols=374 Identities=23% Similarity=0.319 Sum_probs=244.1
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C----------
Q 009282 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (538)
Q Consensus 54 ~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~---------- 120 (538)
+++|+|++|+++++ ..+++|+|+||+|++|++.... ...++||+.|++|+|||||+|+|+..... +
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~-~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~~~~~~ 81 (430)
T PRK06038 3 DIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDLPLAEW 81 (430)
T ss_pred CEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC-CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCCCHHHH
Confidence 58999999998764 3578999999999999986433 34689999999999999999999986411 0
Q ss_pred ----------CCChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-eeecCChhhH
Q 009282 121 ----------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AITKWDEVVS 185 (538)
Q Consensus 121 ----------~~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 185 (538)
..++++++ ..+..++++||||++|+... .....++..+.+.+....++... .......+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~----~~~~~~a~~~~GiR~~~~~~~~d~~~~~~~~~~l 157 (430)
T PRK06038 82 LNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY----MDEVAKAVEESGLRAALSYGMIDLGDDEKGEAEL 157 (430)
T ss_pred HHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC----HHHHHHHHHHhCCeEEEEchhccCCCccchHHHH
Confidence 11222222 12345688999999998532 22344444444444333222110 0001112233
Q ss_pred HHHHHHHHHc---CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 186 DEMEVMVKEK---GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 186 ~~~~~~~~~~---g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
++...+.+.. ....++....++....++++.++++++.|+++|+++.+|+.+......... ...|...
T Consensus 158 ~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~--~~~G~~~------- 228 (430)
T PRK06038 158 KEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMK--EQYGMCS------- 228 (430)
T ss_pred HHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHH--HHhCCCH-------
Confidence 3333333221 123566666777777889999999999999999999999966543222211 1223321
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCC
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (538)
++. ++....++.++.+.|+...++ +.++++++.|+.+++||.. ++..+...
T Consensus 229 ---------i~~-l~~~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~v~~~P~~-------------n~~~~~~~----- 279 (430)
T PRK06038 229 ---------VNY-LDDIGFLGPDVLAAHCVWLSD-GDIEILRERGVNVSHNPVS-------------NMKLASGI----- 279 (430)
T ss_pred ---------HHH-HHHcCCCCCCeEEEEEecCCH-HHHHHHHhcCCEEEEChHH-------------hhhhccCC-----
Confidence 111 222234577888999998887 8899999999999988764 22111111
Q ss_pred CCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCHHHHHHHHh
Q 009282 343 IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYVRLTS 420 (538)
Q Consensus 343 ~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~~eal~~aT 420 (538)
.++..++++|+++++|||+...+.... ++. ++.......... ...+++++++|+|+|
T Consensus 280 -------~p~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~---------~~~~a~~~~~~~~~~~~~~~~~~al~~aT 338 (430)
T PRK06038 280 -------APVPKLLERGVNVSLGTDGCASNNNLD-----MFE---------EMKTAALLHKVNTMDPTALPARQVLEMAT 338 (430)
T ss_pred -------CCHHHHHHCCCeEEEeCCCCccCCCcC-----HHH---------HHHHHHHHhhhccCCCCcCCHHHHHHHHh
Confidence 228899999999999999653322111 111 222222222211 234689999999999
Q ss_pred HhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 421 TECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 421 ~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
.|||+++|++ .|+|++||.||||++|.+.+...+.. ++....+|.+. ..+|..||++|+++|++|+++..|
T Consensus 339 ~~gA~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~---~~~~~~v~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 409 (430)
T PRK06038 339 VNGAKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVR---DVPSHLVYSAS--GSDVDTTIVDGRILMEDYKVLCMD 409 (430)
T ss_pred HHHHHHhCCC--CCccCCCcccCEEEEeCCCCccCCCC---ChHHheeEeCC--CCceeEEEECCEEEEECCeECCCC
Confidence 9999999994 59999999999999998865433321 11112233332 357999999999999999999987
No 45
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=6.6e-36 Score=308.57 Aligned_cols=379 Identities=20% Similarity=0.217 Sum_probs=245.4
Q ss_pred ccEEEECcE-EEcCCC----cee-eeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-CC----
Q 009282 53 SKILIKGGT-VVNAHH----QQI-ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---- 121 (538)
Q Consensus 53 ~~~~i~n~~-vv~~~~----~~~-~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~---- 121 (538)
.+++|+|++ |++.++ ..+ ++|+|+||+|++||+. ...+++++||+.|++|+|||||+|+|+++.+. |.
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~~~~~ 80 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-TPLPGERVIDATDCVVYPGWVNTHHHLFQSLLKGVPAGI 80 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-CCCCCCeEEeCCCCEEecCEeecccCccccccccccccc
Confidence 468999996 677553 234 4899999999999983 33346799999999999999999999997631 11
Q ss_pred ------------------CChhhHH----HHHHHHHhCCcEEEecccCC---CCC--CHHHHHHHHHHHhcccceeeeee
Q 009282 122 ------------------ETIDDFF----SGQAAALAGGTTMHIDFVIP---ING--SLTAGFEAYEKKAKNSCMDYGFH 174 (538)
Q Consensus 122 ------------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~ 174 (538)
.+++.++ .+...++++||||++|+... ... .....+++..+.+.+..+..+..
T Consensus 81 ~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 160 (457)
T PRK12393 81 NQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGA 160 (457)
T ss_pred CCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEEEcccc
Confidence 1222222 22345689999999998521 111 23445566666665644332221
Q ss_pred e-------eeec-----CChhhHHHHHHHHHHc-C-C--cEEEEEeeeCCC-ccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 175 M-------AITK-----WDEVVSDEMEVMVKEK-G-I--NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 175 ~-------~~~~-----~~~~~~~~~~~~~~~~-g-~--~~ik~~~~~~~~-~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
. .... ..++.++....+.+.. + . ..+.+.+.++.. +.++++.++++++.|+++|+++.+|+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e 240 (457)
T PRK12393 161 TQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLHSHLSE 240 (457)
T ss_pred ccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 1 0000 0122333344443221 1 1 124555565555 6778999999999999999999999954
Q ss_pred -hhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccc
Q 009282 238 -GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (538)
Q Consensus 238 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~ 316 (538)
..++.... ...|... ++ .+.....++.++.+.|+...++ ++++++++.|+.++.||.+
T Consensus 241 ~~~~~~~~~---~~~g~~~----------------~~-~l~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~s 299 (457)
T PRK12393 241 TVDYVDFCR---EKYGMTP----------------VQ-FVAEHDWLGPDVWFAHLVKLDA-EEIALLAQTGTGIAHCPQS 299 (457)
T ss_pred CHHHHHHHH---HHhCCCH----------------HH-HHHHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEECchh
Confidence 33332222 2223211 11 1122234567888999999887 8999999999999999865
Q ss_pred cccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhh
Q 009282 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 396 (538)
++..+.+. .+++.+++.|+++++|||+...+.... +|. ++.
T Consensus 300 -------------n~~lg~g~------------~~~~~~~~~Gv~v~lGtD~~~~~~~~d-----~~~---------~~~ 340 (457)
T PRK12393 300 -------------NGRLGSGI------------APALAMEAAGVPVSLGVDGAASNESAD-----MLS---------EAH 340 (457)
T ss_pred -------------hhhhcccC------------CCHHHHHHCCCeEEEecCCcccCCCcc-----HHH---------HHH
Confidence 22222221 227899999999999999754322211 111 222
Q ss_pred HHHHHHHhh-hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEe
Q 009282 397 MHLVWDTMV-ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVK 475 (538)
Q Consensus 397 ~~~~~~~~~-~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (538)
......... ....++++++|+++|.+||+++|++ ++|+|++||.|||+|+|.+.+...+.. ++. ++++.... .
T Consensus 341 ~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~-~~G~l~~G~~ADlvv~d~~~~~~~~~~---~~~-~~~~~~~~-~ 414 (457)
T PRK12393 341 AAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLD-AIGTLAVGQAADLAIYDLDDPRFFGLH---DPA-IAPVACGG-P 414 (457)
T ss_pred HHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCC-CCCCcCCCCcCCEEEEeCCCcccCCCC---Cch-hhhhccCC-C
Confidence 222221110 1234899999999999999999995 489999999999999999877555421 221 22322211 4
Q ss_pred eEEEEEEECCEEEEECCeeeccC
Q 009282 476 GKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 476 ~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
.+|..||++|++||++|+++..|
T Consensus 415 ~~v~~v~v~G~~v~~~~~~~~~d 437 (457)
T PRK12393 415 APVKALLVNGRPVVENGAIPGLD 437 (457)
T ss_pred CCeeEEEECCEEEEECCccCCCC
Confidence 68999999999999999998876
No 46
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.2e-35 Score=304.62 Aligned_cols=373 Identities=23% Similarity=0.294 Sum_probs=243.8
Q ss_pred cEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C----------
Q 009282 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~---------- 120 (538)
+++|+|++|++++.. .+++|+|+||+|++|++....+ ..++||+.|++|+|||||+|+|+..... +
T Consensus 2 ~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~~-~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~l~~~ 80 (424)
T PRK08393 2 SILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINKP-ADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVPLMEW 80 (424)
T ss_pred eEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCCHHHH
Confidence 589999999998863 5789999999999999865433 4679999999999999999999876411 0
Q ss_pred ----------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-ecCChhhH
Q 009282 121 ----------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (538)
Q Consensus 121 ----------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (538)
..++++++. ....++++||||++|+... .....++..+.+.+....++..... .....+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~----~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~l 156 (424)
T PRK08393 81 LQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYFH----MEEVAKATLEVGLRGYLSYGMVDLGDEEKREKEI 156 (424)
T ss_pred HHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccccC----HHHHHHHHHHhCCeEEEeceEecCCCccchHHHH
Confidence 122333332 3345689999999988532 2344555555555544443321111 11111222
Q ss_pred HHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
++..+..+ ..+...+...+.++..+.++++.++++++.|+++|+++++|+. ...++....+ .+|...
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~g~~~------ 227 (424)
T PRK08393 157 KETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIRE---KYGKSP------ 227 (424)
T ss_pred HHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCcCH------
Confidence 22222221 1233345555566667778999999999999999999999994 3433332222 223211
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
+ +.+.....++.++.+.|+...++ +.++++++.|+.+++||.. ++..+.+.
T Consensus 228 ----------~-~~l~~~G~l~~~~~~~H~~~l~~-~~l~~la~~g~~v~~~P~s-------------n~~lg~g~---- 278 (424)
T PRK08393 228 ----------V-VLLDEIGFLNEDVIAAHGVWLSS-RDIRILASAGVTVAHNPAS-------------NMKLGSGV---- 278 (424)
T ss_pred ----------H-HHHHHcCCCCCCcEEEEeecCCH-HHHHHHHhcCCEEEECHHH-------------HHhhccCC----
Confidence 1 11222344567788999998876 8899999999999988764 11111111
Q ss_pred CCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCCHHHHHHHH
Q 009282 342 PIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYVRLT 419 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls~~eal~~a 419 (538)
.++..++++|+++++|||....+....+ +. ++.+...+.+.. ....++++++|+++
T Consensus 279 --------~~~~~~~~~Gv~v~lGtD~~~~~~~~d~-----~~---------~~~~a~~~~~~~~~~~~~~~~~~al~~a 336 (424)
T PRK08393 279 --------MPLRKLLNAGVNVALGTDGAASNNNLDM-----LR---------EMKLAALLHKVHNLDPTIADAETVFRMA 336 (424)
T ss_pred --------CCHHHHHHCCCcEEEecCCCccCCchhH-----HH---------HHHHHHHHHhhccCCCCcCCHHHHHHHH
Confidence 2278899999999999997543222111 11 222222222221 11236889999999
Q ss_pred hHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 420 STECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 420 T~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
|.|||+++|++ .|+|++||+||||++|.+.+...+..++... ..+.+. ..+|..|||+|++||++|+++..|
T Consensus 337 T~~~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~---~~~~~~--~~~v~~v~v~G~~v~~~g~~~~~d 408 (424)
T PRK08393 337 TQNGAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINNPISH---LVYSAN--GNDVETTIVDGKIVMLDGEVLTLD 408 (424)
T ss_pred HHHHHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCChHHH---eeeeCC--CCCeeEEEECCEEEEECCeECCCC
Confidence 99999999994 5999999999999999987655543322222 222221 358999999999999999998876
No 47
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=4.6e-36 Score=307.33 Aligned_cols=361 Identities=19% Similarity=0.172 Sum_probs=230.7
Q ss_pred eeeeEEEeCCEEEEecCCCCC----CCCceEEecCCCeeeccccccccccccccC-CC--------------------CC
Q 009282 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------------------ET 123 (538)
Q Consensus 69 ~~~~V~I~~grI~~Vg~~~~~----~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~--------------------~~ 123 (538)
++++|+|+||||++||+..+. +.+.++||++|++|+|||||+|+|+..... +. .+
T Consensus 30 ~~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~ 109 (433)
T PRK09228 30 EDGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFAD 109 (433)
T ss_pred CCeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCC
Confidence 588999999999999985432 223689999999999999999999876521 10 11
Q ss_pred hhhHHHH----HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-ee----cCChhhHHHHHHHHHH
Q 009282 124 IDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-IT----KWDEVVSDEMEVMVKE 194 (538)
Q Consensus 124 ~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~ 194 (538)
++..+.. ...++++||||++|+............+...+.+.+..+..++... .. ....+.+++..++.++
T Consensus 110 ~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 189 (433)
T PRK09228 110 PAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDSKALIER 189 (433)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 2222222 3446899999999875432222333344444445454443332211 01 1112223333333322
Q ss_pred -cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
.+...++..+.++..+.++.+.++++.+.|+++ ++++++|.. +..+.....+ .+|.. + .
T Consensus 190 ~~~~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~---~~g~~---------~-----~- 251 (433)
T PRK09228 190 WHGKGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKE---LFPEA---------R-----D- 251 (433)
T ss_pred HhCCCCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHH---HcCCC---------C-----C-
Confidence 233456666677777788899999999999998 999999994 4443332222 22221 0 0
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHH
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (538)
..+.++....++.++.+.|+...++ +.++++++.|+.++.||... +..+.+. .+
T Consensus 252 ~~~~l~~~G~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~sn-------------~~lg~g~------------~~ 305 (433)
T PRK09228 252 YLDVYERYGLLGPRAVFAHCIHLED-RERRRLAETGAAIAFCPTSN-------------LFLGSGL------------FD 305 (433)
T ss_pred HHHHHHHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCeEEECCccH-------------HhhcCCC------------cC
Confidence 0111222334577899999999887 88999999999999888752 2221221 22
Q ss_pred HHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCC
Q 009282 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYP 431 (538)
Q Consensus 352 l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~ 431 (538)
+..++++|+++++|||....+ ... ++. ++.......++ ...+++++++|+++|.+||+++|+++
T Consensus 306 ~~~~~~~Gv~v~lGtD~~~~~-~~d-----~~~---------~~~~~~~~~~~-~~~~~~~~~~l~~aT~~~A~~lg~~~ 369 (433)
T PRK09228 306 LKRADAAGVRVGLGTDVGGGT-SFS-----MLQ---------TMNEAYKVQQL-QGYRLSPFQAFYLATLGGARALGLDD 369 (433)
T ss_pred HHHHHHCCCeEEEecCCCCCC-CCC-----HHH---------HHHHHHHHhhc-ccCCCCHHHHHHHHhHHHHHHhCCCC
Confidence 788999999999999974321 110 111 22222222222 23458999999999999999999987
Q ss_pred CCcccccCCCccEEEEcCCCceeecc-----CcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 432 RKGAILVGSDADIIIFNPNSSFEITA-----RSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 432 ~~GsI~~Gk~ADlvvld~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++|+|++||.||||++|.+..+...+ ..+.++.....|.+. .++|+.|||+|++|+++
T Consensus 370 ~~G~l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~--~~~V~~v~VdG~~v~~~ 432 (433)
T PRK09228 370 RIGNLAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGD--DRAVAETYVAGRPVYRR 432 (433)
T ss_pred CCcccCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCC--ccceeEEEECCEEeccC
Confidence 89999999999999999876433211 011223333455544 56899999999999875
No 48
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=100.00 E-value=1.5e-34 Score=289.42 Aligned_cols=354 Identities=18% Similarity=0.198 Sum_probs=242.5
Q ss_pred EEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccccc----CCC--CChhhHHH
Q 009282 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF----MGS--ETIDDFFS 129 (538)
Q Consensus 56 ~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~----~~~--~~~~~~~~ 129 (538)
+|+|++|+++++...++|.|+||+|++|++... ...++||++|++|+|||||+|+|..... .+. ...+.+..
T Consensus 1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~--~~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp~~~~~~~~~~~~ 78 (376)
T TIGR02318 1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV--ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPRPGVDWPIDAAIVE 78 (376)
T ss_pred CEeCeEEECCCceEeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEeccEEEcccCccccCcCCCCCCCcchHHHHHH
Confidence 489999999887766799999999999987432 2466899999999999999999987720 032 12267888
Q ss_pred HHHHHHhCCcEEEecccCCC----C-C---CHHHHHHHHHHHhcc--cceeeeeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 130 GQAAALAGGTTMHIDFVIPI----N-G---SLTAGFEAYEKKAKN--SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~----~-~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
..++++++||||++|+.... . . .....++.......+ ..+++++|.++.....+..+++..+. +.|...
T Consensus 79 ~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~-~~g~~~ 157 (376)
T TIGR02318 79 HDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELI-DDPRVD 157 (376)
T ss_pred HHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHh-cCCCcC
Confidence 88999999999999995322 1 1 223333333333333 77899999988766666788888887 889999
Q ss_pred EEEEeeeCCC--ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHH
Q 009282 200 FKFFMAYKGS--FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (538)
Q Consensus 200 ik~~~~~~~~--~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~ 277 (538)
+|.|++..+. +..+.+.+.+.+.. +.| ..|++....+...... .+. ...+.+.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~---~~~-------------~~~e~i~~~v~ 216 (376)
T TIGR02318 158 LISLMDHTPGQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIAR---RAE-------------YGLANRSEIAA 216 (376)
T ss_pred EEEEeCCCCCcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHHH---Hhh-------------ccHHHHHHHHH
Confidence 9999875432 24456666666644 555 6677765443322221 111 11478999999
Q ss_pred HHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccc-eeecC-CCCCccc--HHHHH
Q 009282 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK-YVMSP-PIRASGH--NKALQ 353 (538)
Q Consensus 278 ~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~r~~~~--~~~l~ 353 (538)
++++.|.++ ..|..... +.++.+++.|+.++-.+. ..+.... ....|.. ....| ++|.... ...++
T Consensus 217 ~A~~~G~~v-~sH~~~~~--e~i~~a~~~Gv~~~E~~~------t~e~a~~-~~~~G~~v~~~~p~~~r~~~~~~~~~l~ 286 (376)
T TIGR02318 217 LARARGIPL-ASHDDDTP--EHVAEAHDLGVTISEFPT------TLEAAKE-ARSLGMQILMGAPNIVRGGSHSGNLSAR 286 (376)
T ss_pred HHHHCCCeE-EEecCCCH--HHHHHHHHCCCChhccCC------CHHHHHH-HHHcCCeEEECCccccccccccchHHHH
Confidence 999999987 77874222 456777778874432211 1111110 0111222 22233 3444333 67889
Q ss_pred HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCC
Q 009282 354 AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRK 433 (538)
Q Consensus 354 ~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~ 433 (538)
++++.|+.++++||+.|.+. +...+.......++++.++++++|.|||+++|++ ++
T Consensus 287 ~~~~~G~~~~l~SD~~p~~~-----------------------l~~~~~~~~~~~gl~~~~al~~~T~npA~~lgl~-~~ 342 (376)
T TIGR02318 287 ELAHEGLLDVLASDYVPASL-----------------------LLAAFQLADDVEGIPLPQAVKMVTKNPARAVGLS-DR 342 (376)
T ss_pred HHHHCCCcEEEEcCCCcHHH-----------------------HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCCC-CC
Confidence 99999999999999865321 1222222333346999999999999999999994 67
Q ss_pred cccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEE
Q 009282 434 GAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 489 (538)
Q Consensus 434 GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~ 489 (538)
|+|++||.|||+++|.+.. ...+..||++|++||
T Consensus 343 G~I~~G~~ADlvvvd~~~~----------------------~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 343 GSIAPGKRADLVRVHRVDG----------------------VPRIRAVWRAGRRVY 376 (376)
T ss_pred CcCCCCCcccEEEEcCCCC----------------------CccceEEEECCEEeC
Confidence 9999999999999996311 136889999999986
No 49
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=6.2e-36 Score=304.60 Aligned_cols=371 Identities=20% Similarity=0.253 Sum_probs=240.3
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCC----CCCceEEecCCCeeeccccccccccccccC------
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM------ 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~----~~~~~vID~~G~~v~PGlID~H~H~~~~~~------ 119 (538)
..+++|+||+|+|++. .....|.|+||||++||++.+. .+.+++||++|++|+|||||+|.|+...-.
T Consensus 4 ~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~~ 83 (535)
T COG1574 4 AADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLELN 83 (535)
T ss_pred ccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhccc
Confidence 6789999999999986 3678999999999999986432 257899999999999999999999866400
Q ss_pred ------------------------------------------------------------------------------CC
Q 009282 120 ------------------------------------------------------------------------------GS 121 (538)
Q Consensus 120 ------------------------------------------------------------------------------~~ 121 (538)
|.
T Consensus 84 ~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~Gi 163 (535)
T COG1574 84 LDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAGI 163 (535)
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcCC
Confidence 00
Q ss_pred C--------------------------------------ChhhHH----H-HHHHHHhCCcEEEecccCCCCCCHHHHHH
Q 009282 122 E--------------------------------------TIDDFF----S-GQAAALAGGTTMHIDFVIPINGSLTAGFE 158 (538)
Q Consensus 122 ~--------------------------------------~~~~~~----~-~~~~~l~~GvTt~~d~~~~~~~~~~~~~~ 158 (538)
. .++... . ..+.+.+.|||++.|+.. . ......+.
T Consensus 164 ~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~-~-~~~~~~~~ 241 (535)
T COG1574 164 TRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAG-Y-QGYYADYE 241 (535)
T ss_pred CCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccc-c-ccchhHHH
Confidence 0 011111 0 233556899999999976 2 22223333
Q ss_pred HHHHHhcc--cceeeeeeeeeecCChhhHHHHHHHHHH------cCCcEEEEEeee----------------C---CCcc
Q 009282 159 AYEKKAKN--SCMDYGFHMAITKWDEVVSDEMEVMVKE------KGINSFKFFMAY----------------K---GSFM 211 (538)
Q Consensus 159 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~ik~~~~~----------------~---~~~~ 211 (538)
.+...... ..+.+........... +....... .....+|+|.+. + |...
T Consensus 242 ~~r~~~~~~~l~~rv~~~l~~~~~~~----~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G~~l 317 (535)
T COG1574 242 AYRALAAGGELPVRVALLLFTEDLKE----ERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSGELL 317 (535)
T ss_pred HHHHHHhcCcceEEEEeeccccchhh----HHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCCCcc
Confidence 33333322 3333332221111111 11111111 123355666652 1 4567
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
++.+++.++++.|.++|+++.+|+.++..++..++.+.. +.......+.+..+.|+
T Consensus 318 ~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~LdafE~------------------------~~~~~~~~~~r~rieH~ 373 (535)
T COG1574 318 LTEEELEELVRAADERGLPVAVHAIGDGAVDAALDAFEK------------------------ARKKNGLKGLRHRIEHA 373 (535)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHHHHH------------------------HhhhcCCccCCceeeee
Confidence 889999999999999999999999999888777755433 22222234677789999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
...++ ++++++++.|+ ++++.++++.....++.+ .+.. ......+ +++.++++|+++++|||++..
T Consensus 374 ~~v~~-~~i~R~~~Lgv--~~svQP~f~~~~~~~~~~-rlG~-~r~~~~~---------p~~~ll~~G~~la~gSD~Pv~ 439 (535)
T COG1574 374 ELVSP-DQIERFAKLGV--IASVQPNFLFSDGEWYVD-RLGE-ERASRSY---------PFRSLLKAGVPLAGGSDAPVE 439 (535)
T ss_pred eecCH-hHHHHHHhcCc--eEeeccccccccchHHHH-hhhh-hhhhccC---------cHHHHHHCCCeEeccCCCCCC
Confidence 99887 99999998885 455555444433222221 1111 1122222 378999999999999997543
Q ss_pred ChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
+. +||......+++....-. ....+..||++|||++.|.++|++.+.++++|+|++||.|||+|+|.|+
T Consensus 440 ~~-------dP~~~i~~AVtr~~~~g~----~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~ 508 (535)
T COG1574 440 PY-------DPWLGIYAAVTRKTPGGR----VLGPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDP 508 (535)
T ss_pred CC-------ChHHHHHHHHcCCCCCCC----CCccccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCc
Confidence 22 244322211111000000 0000115999999999999999999999999999999999999999654
Q ss_pred ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 452 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
+.++++.++ ..+|..|+++|++||+.
T Consensus 509 -f~~~~~~i~-------------~~~v~~T~~~Gk~VY~~ 534 (535)
T COG1574 509 -FTVDPDSIK-------------DTKVVLTIVAGKVVYRA 534 (535)
T ss_pred -ccCChHHhc-------------cceEEEEEEcCeEeecC
Confidence 445444333 45899999999999985
No 50
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-35 Score=293.52 Aligned_cols=344 Identities=23% Similarity=0.264 Sum_probs=212.9
Q ss_pred ccEEEECcEEEcCC-CceeeeEEEeCCEEEEecCC-CCCCCCceEEecCCCeeeccccccccccccccCCCCChh-----
Q 009282 53 SKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPN-INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETID----- 125 (538)
Q Consensus 53 ~~~~i~n~~vv~~~-~~~~~~V~I~~grI~~Vg~~-~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~----- 125 (538)
..+++.+++.+++- ..+++.|+|+||||++||+. ...+++.++||++|++|+|||||+|+|+... +....+
T Consensus 10 ~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~~~~~viD~~G~~V~PGLID~HtHl~~~--~~~~~~~~~~~ 87 (406)
T COG1228 10 AMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPAGAEVIDAKGKTVTPGLIDAHTHLGFG--GSRGGEFELRE 87 (406)
T ss_pred hhheeeccccCCCcceeecceEEEECCEEEEecCcccCCCCCCeEEeCCCCEEccceeecccccccc--CCccchhhhcc
Confidence 45788899988843 34679999999999999988 5667789999999999999999999999885 110000
Q ss_pred --------------------------------hHHHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceee
Q 009282 126 --------------------------------DFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDY 171 (538)
Q Consensus 126 --------------------------------~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 171 (538)
.....+..++++|+|+.-........ ......+............+
T Consensus 88 ~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~ 167 (406)
T COG1228 88 AGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLKESRPVAV 167 (406)
T ss_pred cCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhccccccccc
Confidence 00111223355666665433221111 00001111111110000111
Q ss_pred ee-----ee--eeecCC-hhhHHHHHHHHHHcCCcEEEEEee-eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009282 172 GF-----HM--AITKWD-EVVSDEMEVMVKEKGINSFKFFMA-YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (538)
Q Consensus 172 ~~-----~~--~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~~-~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~ 242 (538)
.. +. ...... +...+.+..+........+.-+.+ .+....++.++++++++.|++.|+++.+|++..+
T Consensus 168 ~~t~~~~~~~~~~~~~~r~~~~~g~~~~i~~~a~~~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~--- 244 (406)
T COG1228 168 GSTPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVDAFCEGGQFSPEEIRAVLAAALKAGIPVKAHAHGAD--- 244 (406)
T ss_pred cCccccccCCcccccchHHHHHHHHHHHHHHHHhccccchhhccccccccCHHHHHHHHHHHHHCCCceEEEecccc---
Confidence 10 00 001111 112222222111111111222222 2344667899999999999999999999998775
Q ss_pred HHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHH--cCCcEEEeccccccc
Q 009282 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK--AGQRVIGEPVVSGLV 320 (538)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~--~g~~v~~~~~~~~~~ 320 (538)
..+.+.+.|.. .+.|....+. +.+..+++ .|.++ +...+..
T Consensus 245 -g~~~A~~~g~~--------------------------------s~~H~~~ld~-~~~~~~a~~~~g~~~-~~l~p~~-- 287 (406)
T COG1228 245 -GIKLAIRLGAK--------------------------------SAEHGTLLDH-ETAALLAEKGAGTPV-PVLLPRT-- 287 (406)
T ss_pred -hHHHHHHhCcc--------------------------------eehhhhhcCH-hHHHHHhhccCCCcc-ccccchh--
Confidence 33333344443 3566666555 77888888 66531 2222110
Q ss_pred cCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
.+.. .......++.+++.|++++++||+.+.+.. ..+.+.
T Consensus 288 ---------~~~l-----------~e~~~~~~~~l~~~GV~vai~TD~~~~~~~--------------------~~l~~~ 327 (406)
T COG1228 288 ---------KFEL-----------RELDYKPARKLIDAGVKVAIGTDHNPGTSH--------------------GSLALE 327 (406)
T ss_pred ---------hhhh-----------hcccchhHHHHHHCCCEEEEEcCCCCCchh--------------------hHHHHH
Confidence 0110 001234588999999999999998876531 133444
Q ss_pred HHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEE
Q 009282 401 WDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 480 (538)
Q Consensus 401 ~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (538)
+..++..+ ||++|||+++|.|||++||+++++||||+||.|||||||.|++.++ +|... ...+.+
T Consensus 328 m~l~~~~g-mtp~EaL~a~T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i------------~y~~~--~~~v~~ 392 (406)
T COG1228 328 MALAVRLG-MTPEEALKAATINAAKALGLADKVGSLEPGKDADLVVWDGDPLADI------------PYFLG--LNKVEA 392 (406)
T ss_pred HHHHHHcC-CCHHHHHHHHHHHHHHHcCCccccccccCCCccCEEEEcCCChhhc------------ccccc--CCceEE
Confidence 44556677 9999999999999999999999999999999999999999987554 22211 468999
Q ss_pred EEECCEEEEECCe
Q 009282 481 TIAGGRVVWENDE 493 (538)
Q Consensus 481 V~v~G~~V~~~~~ 493 (538)
||++|+++++.+.
T Consensus 393 v~k~G~~~~~~~~ 405 (406)
T COG1228 393 VIKDGKVVYERGS 405 (406)
T ss_pred EEECCEEeecCCC
Confidence 9999999998764
No 51
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=7.7e-35 Score=297.47 Aligned_cols=355 Identities=20% Similarity=0.195 Sum_probs=227.8
Q ss_pred eeeeEEEeCCEEEEecCCCCC----CCCceEEecCCCeeeccccccccccccccC-CC--------------------CC
Q 009282 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------------------ET 123 (538)
Q Consensus 69 ~~~~V~I~~grI~~Vg~~~~~----~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~--------------------~~ 123 (538)
++++|+|+||||++||+.... +.+.++||++|++|+|||||+|+|+..... +. .+
T Consensus 5 ~~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (401)
T TIGR02967 5 EDGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFAD 84 (401)
T ss_pred eceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCC
Confidence 478999999999999985332 335689999999999999999999875311 10 01
Q ss_pred hhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-eee----cCChhhHHHHHHHHHH
Q 009282 124 IDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AIT----KWDEVVSDEMEVMVKE 194 (538)
Q Consensus 124 ~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~ 194 (538)
++... .....++++||||++|+............++..+.+.+......... ..+ ....+..++..++.++
T Consensus 85 ~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 164 (401)
T TIGR02967 85 PDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKALIER 164 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 22221 22356789999999998643322223344555555554333222111 001 1112333444444432
Q ss_pred -cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
.+...++....++..+.++.+.++++++.|+++ |+++++|+. +..+.....+. +|.. +.
T Consensus 165 ~~~~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~---~~~~---------~~------ 226 (401)
T TIGR02967 165 WHGKGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKEL---FPEA---------KD------ 226 (401)
T ss_pred HhCcCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHH---cCCC---------Cc------
Confidence 344457777787777788999999999999999 999999995 44433333321 2221 00
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHH
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (538)
..+.++....++.++++.|+...++ +.++++++.|+.++.||... +..+.+. .+
T Consensus 227 ~~~~l~~~g~lg~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~P~~~-------------~~~~~g~------------~~ 280 (401)
T TIGR02967 227 YLDVYDHYGLLGRRSVFAHCIHLSD-EECQRLAETGAAIAHCPTSN-------------LFLGSGL------------FN 280 (401)
T ss_pred HHHHHHHCCCCCCCeEEEecccCCH-HHHHHHHHcCCeEEEChHHH-------------HHhccCC------------CC
Confidence 1112222334567888999998887 88999999999999888752 1111111 22
Q ss_pred HHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCC
Q 009282 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYP 431 (538)
Q Consensus 352 l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~ 431 (538)
++.++++|+++++|||....+.. . ++. ++.....+.++. ..++++.++|+++|.|||+++|+++
T Consensus 281 ~~~~~~~Gv~v~lGtD~~~~~~~-~-----~~~---------~~~~~~~~~~~~-~~~~~~~~~l~~aT~~~A~~lg~~~ 344 (401)
T TIGR02967 281 LKKALEHGVRVGLGTDVGGGTSF-S-----MLQ---------TLREAYKVSQLQ-GARLSPFEAFYLATLGGARALDLDD 344 (401)
T ss_pred HHHHHHCCCeEEEecCCCCCCCc-C-----HHH---------HHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHhCCcC
Confidence 78899999999999996432111 0 111 112222221222 2459999999999999999999977
Q ss_pred CCcccccCCCccEEEEcCCCceeec----cC-cccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 432 RKGAILVGSDADIIIFNPNSSFEIT----AR-SHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 432 ~~GsI~~Gk~ADlvvld~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
++|+|++||.||||++|.+.+...+ +. ...++.....|.+. ..+|+.|||+|
T Consensus 345 ~~G~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~v~~v~v~G 401 (401)
T TIGR02967 345 RIGNFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKLMYLGD--DRNVAETYVAG 401 (401)
T ss_pred CccccCCCCccCEEEEcCCCCcccccccccccchhhHHHHheeecC--ccceeEEEeCC
Confidence 8999999999999999987654322 00 11234445566654 56899999998
No 52
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=1.5e-34 Score=296.35 Aligned_cols=356 Identities=18% Similarity=0.153 Sum_probs=228.9
Q ss_pred eeeeEEEeCCEEEEecCCCC----CCCCceEEecCCCeeeccccccccccccccC-CC---------------------C
Q 009282 69 QIADVYVEDGIVVAVQPNIN----VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------------------E 122 (538)
Q Consensus 69 ~~~~V~I~~grI~~Vg~~~~----~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~---------------------~ 122 (538)
++++|+|+||+|++||+... .++++++||++|++|+|||||+|+|++.... +. .
T Consensus 25 ~~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~~ 104 (429)
T cd01303 25 EDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKFA 104 (429)
T ss_pred CCeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhcC
Confidence 58899999999999998542 2345789999999999999999999976421 11 0
Q ss_pred ChhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-ee----cCChhhHHHHHHHHH
Q 009282 123 TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-IT----KWDEVVSDEMEVMVK 193 (538)
Q Consensus 123 ~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 193 (538)
+++.. ...+..++++||||++|+...........+++..+.+.+..+....... .+ ....+.++....+.+
T Consensus 105 ~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 184 (429)
T cd01303 105 DPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLIE 184 (429)
T ss_pred CHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHH
Confidence 11111 1223456899999999876432223345556666666665443322211 01 111122333333332
Q ss_pred H-cCC-cEEEEEeeeCCCccCCHHHHHHHHHHHHhcC-CeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 E-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g-~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
. .+. ..+...+.++..+.++.+.++++++.|+++| +++++|+.+ ..+.....+ .+|-.. +
T Consensus 185 ~~~~~~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~---~~g~~~-------~------ 248 (429)
T cd01303 185 RWHGKSGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKE---LFPGAR-------D------ 248 (429)
T ss_pred HHhCcCCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHH---HcCCCC-------C------
Confidence 2 222 4566667777778889999999999999999 999999944 433322221 122000 0
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 349 (538)
..+.+.....++.++.+.|+...++ +.++++++.|+.|+.||.+. +..+.+.
T Consensus 249 --p~~~l~~~G~l~~~~~l~H~~~l~~-~~~~~l~~~g~~v~~~P~sn-------------~~l~~g~------------ 300 (429)
T cd01303 249 --YLDVYDKYGLLTEKTVLAHCVHLSE-EEFNLLKERGASVAHCPTSN-------------LFLGSGL------------ 300 (429)
T ss_pred --HHHHHHHCCCCCCCcEEEeCCCCCH-HHHHHHHHcCCEEEECccch-------------hhhccCC------------
Confidence 0111222234467889999999887 88999999999999988752 2222221
Q ss_pred HHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh-----hcCCCCHHHHHHHHhHhHH
Q 009282 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV-----ESGQISVTDYVRLTSTECA 424 (538)
Q Consensus 350 ~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-----~~~~ls~~eal~~aT~~~A 424 (538)
.+++.++++|+++++|||+...+.. +++. ++.+.....+.. ...+++++++|+++|.|||
T Consensus 301 ~~~~~~~~~Gv~v~lGtD~~~~~~~------d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA 365 (429)
T cd01303 301 FDVRKLLDAGIKVGLGTDVGGGTSF------SMLD---------TLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGA 365 (429)
T ss_pred CCHHHHHHCCCeEEEeccCCCCCCc------cHHH---------HHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHH
Confidence 2378999999999999997533211 1111 222222221211 2245899999999999999
Q ss_pred HHcCCCCCCcccccCCCccEEEEcCCCceeeccC-----cccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 425 RIFNVYPRKGAILVGSDADIIIFNPNSSFEITAR-----SHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 425 ~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
+++|+++++|+|++||+||||++|.+++....+. .+.++.....|.+. ...|+.|||+|
T Consensus 366 ~~lg~~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~~~~~d~~~~lV~~~~--~~~V~~v~V~G 429 (429)
T cd01303 366 EALGLDDKIGNFEVGKEFDAVVIDPSATPLLADRMFRVESLEEALFKFLYLGD--DRNIREVYVAG 429 (429)
T ss_pred HHcCCCCCCcCcCCCCccCEEEEcCCCccccccccccccchhhHHHHHeeeCC--CCCeeEEEeCC
Confidence 9999988899999999999999998876433111 11344445566654 56899999998
No 53
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=8.5e-34 Score=286.52 Aligned_cols=345 Identities=15% Similarity=0.201 Sum_probs=223.4
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+++++|+|++|+++.. ..+++|+|+||+|++|++... +...++||++|++|+|||||+|+|+... +. +....
T Consensus 2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PGliD~H~H~~~~--g~---~~~~~ 75 (379)
T PRK12394 2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPV-ASETRIIHADGCIVTPGLIDYHAHVFYD--GT---EGGVR 75 (379)
T ss_pred CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCC-CCCCeEEECCCCEEECCEEEeeecCCCC--Cc---ccccC
Confidence 4578999999998763 356799999999999987532 2346899999999999999999998654 21 11112
Q ss_pred HHHHHHhCCcEEEecccCCCCCCHHHHHHHH----HHHhcccceeeeeeeeeec----CCh-h--hHHHHHHHHHH--cC
Q 009282 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAY----EKKAKNSCMDYGFHMAITK----WDE-V--VSDEMEVMVKE--KG 196 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~-~--~~~~~~~~~~~--~g 196 (538)
....++++||||++|++..... ........ .+.+.+.++.+++...... ... + ..++..++.++ .+
T Consensus 76 ~~~~~l~~G~Ttv~d~g~~~~~-~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (379)
T PRK12394 76 PDMYMPPNGVTTVVDAGSAGTA-NFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQYRNV 154 (379)
T ss_pred HHHHHHhCCccEEEECCCCCcc-cHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHCcCc
Confidence 2355889999999999754332 22222222 2222344455444432211 011 1 13456666543 45
Q ss_pred CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
..++|++.........+.+.+++.++.|+++|+++++|+.+... ..+.
T Consensus 155 ~~g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~------------------------------- 203 (379)
T PRK12394 155 LQGLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPMKEL------------------------------- 203 (379)
T ss_pred EEEEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccHHHH-------------------------------
Confidence 66777665433222567899999999999999999999965421 1111
Q ss_pred HHHHHHcCCCEEEEeccC-------H---HHHHHHHHHHHcCCcEE-EeccccccccCcccccCCCcccccceeecCCCC
Q 009282 276 IRLAEFVNTPLYVVHVMS-------M---DAMEEIAKARKAGQRVI-GEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR 344 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~-------~---~~~~~i~~~~~~g~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 344 (538)
....+....+.||.. . ...+.+..++++|+.+. .+..
T Consensus 204 ---~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~----------------------------- 251 (379)
T PRK12394 204 ---VSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGR----------------------------- 251 (379)
T ss_pred ---HHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCc-----------------------------
Confidence 111222224555543 1 11356777888886442 1111
Q ss_pred CcccHHHHHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhH
Q 009282 345 ASGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 423 (538)
Q Consensus 345 ~~~~~~~l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~ 423 (538)
...+...++.++++|+ ++++|||+.+.+.... ++ ..+...++++.. .+++++++++++|.||
T Consensus 252 s~~~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~-----~~-----------~~l~~~~~~~~~-~~~~~~~~~~~at~~~ 314 (379)
T PRK12394 252 SHFDMNVARRAIANGFLPDIISSDLSTITKLAW-----PV-----------YSLPWVLSKYLA-LGMALEDVINACTHTP 314 (379)
T ss_pred cccchHHHHHHHHCCCCceEEECCCCCCCcccC-----cc-----------chHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 0112244678999995 8999999987652211 11 123445545554 4599999999999999
Q ss_pred HHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEee----EEEEEEECCEEEEECCe
Q 009282 424 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDE 493 (538)
Q Consensus 424 A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~V~v~G~~V~~~~~ 493 (538)
|+++|++++.|+|++|+.|||+++|.+.++... . -+.+..+.+ .|..||++|++||++-.
T Consensus 315 a~~~g~~~~~G~i~~G~~ADl~~~~~~~~~~~~-~---------d~~g~~~~~~~~~~v~~t~v~G~~v~~~~~ 378 (379)
T PRK12394 315 AVLMGMAAEIGTLAPGAFADIAIFKLKNRHVEF-A---------DIHGETLTGTHVLVPQMTIKSGEILYRQID 378 (379)
T ss_pred HHHhCCCCCCCccCCCCccCEEEEecCcCccee-c---------cCCCCEEEeeeecceEEEEECCEEEEecCC
Confidence 999999657899999999999999988775421 1 134443344 79999999999998543
No 54
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=7.1e-34 Score=291.20 Aligned_cols=345 Identities=21% Similarity=0.208 Sum_probs=216.3
Q ss_pred CcccEEEECcEEEcCCC--------ceeeeEEEeCCEEEEecCCCCCC--CCceEEecCCCeeeccccccccccccccCC
Q 009282 51 SSSKILIKGGTVVNAHH--------QQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~--------~~~~~V~I~~grI~~Vg~~~~~~--~~~~vID~~G~~v~PGlID~H~H~~~~~~~ 120 (538)
|+++++|+|++|+++++ .++++|+|+||||++||+..+.+ ...++||+.|++|+|||||+|+|+......
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~ 80 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAAYAAEVIDAGGKLVTPGLIDCHTHLVFGGNR 80 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCccccccccCceEEECCCCEEeeceEecCCCcccCCCc
Confidence 35679999999998763 24789999999999999865432 236899999999999999999999764110
Q ss_pred ---------C----------------------CChhhHH----HHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHH
Q 009282 121 ---------S----------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (538)
Q Consensus 121 ---------~----------------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~ 163 (538)
. .+++++. ..+..++++||||+.+....... ...+.++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK09356 81 ANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVARRL 160 (406)
T ss_pred HHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHHHH
Confidence 0 0111221 12345688999999976422111 112233333333
Q ss_pred hcccceeee--eee--eeec---CC-hhhHHH----HHHH-HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCe
Q 009282 164 AKNSCMDYG--FHM--AITK---WD-EVVSDE----MEVM-VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGAL 230 (538)
Q Consensus 164 ~~~~~~~~~--~~~--~~~~---~~-~~~~~~----~~~~-~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 230 (538)
+.+..+... +.. .... .. .+.... +.+. ....+...++.+.. ...++.+.++++++.|+++|++
T Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~~~~A~~~g~~ 237 (406)
T PRK09356 161 GEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFCE---TGAFSVEQSERVLEAAKALGLP 237 (406)
T ss_pred hhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEec---CCCCCHHHHHHHHHHHHHCCCC
Confidence 332211111 100 0010 01 111221 1111 11223555554332 3456799999999999999999
Q ss_pred EEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcE
Q 009282 231 AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (538)
Q Consensus 231 v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v 310 (538)
+.+|+.+.... ...+... ..+ ...+.|+...++ +.++++++.|+.+
T Consensus 238 v~~H~~~~~~~-~~~~~~~-------------------------------~~~-~~~~~H~~~~~~-~~~~~la~~g~~~ 283 (406)
T PRK09356 238 VKIHAEQLSNL-GGAELAA-------------------------------EYG-ALSADHLEYLDE-AGIAAMAEAGTVA 283 (406)
T ss_pred EEEEEecccCC-CHHHHHH-------------------------------HcC-CcEehHhhcCCH-HHHHHHHHhCCEE
Confidence 99999642110 0011111 111 224668777766 7899999999988
Q ss_pred EEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC-CChhhhhcCccCcccCCCC
Q 009282 311 IGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA-FNSTQKAFGIDDFRKIPNG 389 (538)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~-~~~~~~~~~~~~~~~~~~g 389 (538)
+.+|..... .+.. ...+++.++++|+++++|||+.+ .++.
T Consensus 284 ~~~P~~~~~-------------l~~~-----------~~~~~~~l~~~Gi~v~lgtD~~~~~~~~--------------- 324 (406)
T PRK09356 284 VLLPGAFYF-------------LRET-----------QYPPARLLRDAGVPVALATDFNPGSSPT--------------- 324 (406)
T ss_pred EECccchhh-------------cCcc-----------cCchHHHHHHCCCeEEEeCCCCCCCChh---------------
Confidence 888764211 1000 01237888999999999999753 2111
Q ss_pred CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCcc
Q 009282 390 VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY 469 (538)
Q Consensus 390 ~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~ 469 (538)
..+...+...+...+++++++|+++|.|||+++|+++++|+|++||.||||++|.+++..+ ++
T Consensus 325 -----~~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~------------~~ 387 (406)
T PRK09356 325 -----ESLLLAMNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWDAPSPAEL------------PY 387 (406)
T ss_pred -----HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEECCCchhhh------------hh
Confidence 1122222222334569999999999999999999988899999999999999998865322 11
Q ss_pred CCeEEeeEEEEEEECCEEEEE
Q 009282 470 EGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 470 ~~~~~~~~v~~V~v~G~~V~~ 490 (538)
... ..+|..||++|++||+
T Consensus 388 ~~~--~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 388 HFG--VNPVETVVKNGEVVVD 406 (406)
T ss_pred hhC--CCCccEEEECCEEeeC
Confidence 111 3589999999999985
No 55
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=6.2e-34 Score=291.77 Aligned_cols=352 Identities=20% Similarity=0.198 Sum_probs=213.1
Q ss_pred EECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC---------------
Q 009282 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------------- 121 (538)
Q Consensus 57 i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~--------------- 121 (538)
|+|++|+|+. ..+++|+|+||+|++||+..+.+++.++||++|++|+|||||+|+|+...+...
T Consensus 2 ~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
T cd01293 2 LRNARLADGG-TALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAII 80 (398)
T ss_pred eeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCCCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHHHHH
Confidence 7899999974 578899999999999998765455789999999999999999999997631110
Q ss_pred --------CChhhH----HHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHH-HHhcccceeeeeeeeeecCC-hhh
Q 009282 122 --------ETIDDF----FSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYE-KKAKNSCMDYGFHMAITKWD-EVV 184 (538)
Q Consensus 122 --------~~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ 184 (538)
.+++++ ...+..++++||||++++...... ...+.+.... +...+............... ++.
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (398)
T cd01293 81 AWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFPQHGLLSTPGG 160 (398)
T ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEeccCccccCCCCH
Confidence 122222 223456789999999876543221 1111221111 11111111110000000011 333
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccccccC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
.+.+++.. +.|...++.+ .+.....++.+.++++++.|+++|+++.+|+.+.. ...
T Consensus 161 ~~~v~~~~-~~g~~~~~~~-~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~--------------------- 217 (398)
T cd01293 161 EELMREAL-KMGADVVGGI-PPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGS--------------------- 217 (398)
T ss_pred HHHHHHHH-HhCCCEEeCC-CCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcch---------------------
Confidence 44444544 4455444322 22223455789999999999999999999995432 111
Q ss_pred CchHHHHHHHHHHHHHHHcC--CCEEEEeccCHHH------HHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc
Q 009282 264 PPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~--~~~~~~h~~~~~~------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (538)
..+.++++.....+ .++.+.|+..... .+.++++++.|+.+++||.+......... .+.
T Consensus 218 ------~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~----~~~--- 284 (398)
T cd01293 218 ------RTLEELAEEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGRED----TTP--- 284 (398)
T ss_pred ------hHHHHHHHHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhccccc----CCC---
Confidence 11122233333333 3678899876531 25689999999999988875322111100 000
Q ss_pred ceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCC----C
Q 009282 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQI----S 411 (538)
Q Consensus 336 ~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~l----s 411 (538)
......++..++++|+++++|||.... ++ .+++... +...+..+....++ +
T Consensus 285 ---------~~~~~~~~~~~~~~Gv~v~lGTD~~~~----------~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~ 339 (398)
T cd01293 285 ---------KRRGVTPVKELRAAGVNVALGSDNVRD----------PW--YPFGSGD----MLEVANLAAHIAQLGTPED 339 (398)
T ss_pred ---------CCCCCCcHHHHHHCCCeEEECCCCCCC----------CC--cCCCCCC----HHHHHHHHHHHHcCCChhh
Confidence 001124489999999999999997421 00 0001000 00111111111123 3
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEE
Q 009282 412 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 488 (538)
Q Consensus 412 ~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V 488 (538)
.+++|+++|.|+|+++|+ +.|+|++||.||||++|.|++.++.. ...++..||++|++|
T Consensus 340 ~~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~d~~~~~~~~~----------------~~~~~~~v~~~G~~~ 398 (398)
T cd01293 340 LALALDLITGNAARALGL--EDYGIKVGCPADLVLLDAEDVAEAVA----------------RQPPRRVVIRKGRVV 398 (398)
T ss_pred HHHHHHhcChhhhhhcCC--cCcccccCCcceEEEECCCCHHHHHh----------------cCCCccEEEECCEEC
Confidence 478999999999999999 57999999999999999987754421 024789999999875
No 56
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=6.1e-34 Score=293.51 Aligned_cols=371 Identities=16% Similarity=0.106 Sum_probs=231.5
Q ss_pred EEEECcEEEcCCCceeeeEEEe-CCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C------------
Q 009282 55 ILIKGGTVVNAHHQQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------------ 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~-~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~------------ 120 (538)
+-++|+.+-++ -.++.+|+|+ ||||++||+....++. .+..|++|+|||||+|+|++..+. |
T Consensus 4 ~~~~~~~~~~~-~~~~~~i~I~~~g~I~~vg~~~~~~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~~~~l 79 (455)
T TIGR02022 4 YWAERALLPDG-WAEGVRIAVAADGRILAIETGVPAAPG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGGDSF 79 (455)
T ss_pred hhHHhccCCCc-cccCceEEEecCCEEEEecCCCCcccc---cccCCCEEccCCcccCcchhhHhhcCCcccccCCCCCH
Confidence 34566666322 1257899999 9999999986543222 234689999999999999976411 0
Q ss_pred ------------CCChhhHHH----HHHHHHhCCcEEEecccCCCC-----------CCHHHHHHHHHHHhcccceeeee
Q 009282 121 ------------SETIDDFFS----GQAAALAGGTTMHIDFVIPIN-----------GSLTAGFEAYEKKAKNSCMDYGF 173 (538)
Q Consensus 121 ------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 173 (538)
..++++++. .+..++++||||++|+..... ......+++..+.+.+..+...+
T Consensus 80 ~~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~R~~~~~~~ 159 (455)
T TIGR02022 80 WTWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGIGLTLLPVF 159 (455)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCCeEEeeeee
Confidence 112233322 234458899999999742110 01244555666665554333221
Q ss_pred eee-----eecC--------C-hhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-C
Q 009282 174 HMA-----ITKW--------D-EVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-N 237 (538)
Q Consensus 174 ~~~-----~~~~--------~-~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~ 237 (538)
... .... + ++..+....+.+. .+...+...+.+++.+.++.+.++++.+ ++++|+++++|+. +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g~~v~~H~~e~ 238 (455)
T TIGR02022 160 YAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAAQPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQAPVHIHVAEQ 238 (455)
T ss_pred eecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhccCCceEEEEecCCCCcCCHHHHHHHHH-HHhCCCceEEEECCC
Confidence 110 0100 0 1122222333211 1223355556667777889999999999 8899999999994 4
Q ss_pred hhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccc
Q 009282 238 GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
..+..... ...|... ++.+ .....++.++.+.||...++ ++++++++.|+.+++||.+
T Consensus 239 ~~e~~~~~---~~~G~~~----------------v~~l-~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~~P~s- 296 (455)
T TIGR02022 239 QKEVDDCL---AWSGRRP----------------VEWL-LDHGPVDARWCLVHATHLTD-EETALLARSGAVAGLCPTT- 296 (455)
T ss_pred hHHHHHHH---HHhCCCH----------------HHHH-HHcCCCCCCEEEEEeecCCH-HHHHHHHHcCCeEEEChhh-
Confidence 43333222 2234321 1111 22234677889999999887 8899999999999999986
Q ss_pred ccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhH
Q 009282 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 397 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~ 397 (538)
++..+.++ +| +++++++|+++++|||.....+ ++. ++..
T Consensus 297 ------------n~~lg~g~---~p---------i~~l~~~Gv~v~lGTD~~~~~d--------~~~---------~m~~ 335 (455)
T TIGR02022 297 ------------EANLGDGI---FP---------AVDFVAAGGRFGIGSDSHVVID--------VAE---------ELRQ 335 (455)
T ss_pred ------------hccccCCC---CC---------HHHHHHCCCeEEEECCCCCCCC--------HHH---------HHHH
Confidence 33333322 22 8899999999999999643211 111 2222
Q ss_pred HHHHHHhhh---------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCc
Q 009282 398 HLVWDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNV 468 (538)
Q Consensus 398 ~~~~~~~~~---------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~ 468 (538)
...+.+... ...++.+++|+|+|.|+|+++|+ + .|+|++||+|||||+|.+.+...+.. ..++....+
T Consensus 336 a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsLe~Gk~ADlvvld~~~~~~~~~~-~~~~~~~lv 412 (455)
T TIGR02022 336 LEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGLRAGARADFLTLDGDHPYLAGAL-GDSLLDRWL 412 (455)
T ss_pred HHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCccCCCCCcCEEEEeCCCcccCCCC-chhHHHHHh
Confidence 222222211 12467889999999999999999 3 89999999999999998755433210 011122234
Q ss_pred cCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 469 YEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 469 ~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
|.+. ..+|..|||+|++|+++|+++..+
T Consensus 413 ~~~~--~~~V~~v~V~G~~v~~~g~~~~~~ 440 (455)
T TIGR02022 413 FAGG--GAAVRDVWVGGRWVVRDGRHALRE 440 (455)
T ss_pred hcCC--CCCccEEEECCEEEEECCccccHH
Confidence 4433 458999999999999999998654
No 57
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=2.3e-33 Score=284.15 Aligned_cols=355 Identities=16% Similarity=0.182 Sum_probs=228.4
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
..+++|+|++|++..+...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~P-- 147 (573)
T PRK13206 70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICP-- 147 (573)
T ss_pred CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCc--
Confidence 56899999999997777788999999999999974211 1357899999999999999999998665
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCC----C----CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN----G----SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+ ..++++++||||+++++..+. . .....+....+......++++++...... ..+++.++
T Consensus 148 g---------~~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~~~pvn~g~~g~g~~~---~~~~L~el 215 (573)
T PRK13206 148 Q---------IVDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALDGWPVNVALLGKGNTV---SAEALWEQ 215 (573)
T ss_pred h---------HHHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhhcCceeEEEecCcCcC---CHHHHHHH
Confidence 2 137899999999998643221 0 11112223333444567788887643222 24567777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|++.++ ..+.+.+.+.++.|+++|.++.+|+++..+. |.
T Consensus 216 ~-~aGA~GfKi~~d~----g~t~~~i~~aL~~A~~~gv~V~iHadtlne~----------g~------------------ 262 (573)
T PRK13206 216 L-RGGAGGFKLHEDW----GSTPAAIDACLRVADAAGVQVALHSDTLNEA----------GF------------------ 262 (573)
T ss_pred H-HCCCcEEeecCcc----CCCHHHHHHHHHHHHHhCCEEEEECCCcccc----------ch------------------
Confidence 6 7899999987543 4689999999999999999999999876542 11
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHH---HHHHHHHHHcCC-cEEEecccccc---------------ccCcccccCCCcc
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGQ-RVIGEPVVSGL---------------VLDDSWLWHSDFV 332 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~---~~~i~~~~~~g~-~v~~~~~~~~~---------------~~~~~~~~~~~~~ 332 (538)
.+. .++...|..+|+.|...... .+.++.....++ +-+.+|+-.+. ++++..-++..|.
T Consensus 263 -~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa 340 (573)
T PRK13206 263 -VED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFA 340 (573)
T ss_pred -hhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCCcCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhh
Confidence 011 23445678889999875332 133333332222 11112211110 1222211111111
Q ss_pred cccceeecCCCCCcccHHHH-HHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh-----hh
Q 009282 333 TAAKYVMSPPIRASGHNKAL-QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM-----VE 406 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l-~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~-----~~ 406 (538)
. .|.+.+..+. ..+++.|+..+++||.+........ ..+.|.+ ......+.. ..
T Consensus 341 ~---------srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~-----~~~~~q~------a~~~~~rr~~l~g~~~ 400 (573)
T PRK13206 341 E---------SRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEV-----VLRTWQT------AHVMKRRRGALPGDGR 400 (573)
T ss_pred h---------hhccceeeccCchHhhCCcEEeccCCccccccccch-----hhhHHHH------HHHHHhccCCCCCCCc
Confidence 1 1111111111 2478889999999998764332111 1111110 000000000 01
Q ss_pred cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCE
Q 009282 407 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 486 (538)
Q Consensus 407 ~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~ 486 (538)
...++..++|++.|+|||+++|+++.+|+|++||.|||||||.+.+ ..++..||++|+
T Consensus 401 ~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f----------------------~~~~~~ti~~G~ 458 (573)
T PRK13206 401 ADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFF----------------------GVRPHAVLKGGA 458 (573)
T ss_pred ccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECcccc----------------------CCCccEEEECCE
Confidence 3448999999999999999999988899999999999999997643 235789999999
Q ss_pred EEEEC-Ceeecc
Q 009282 487 VVWEN-DELNVV 497 (538)
Q Consensus 487 ~V~~~-~~~~~~ 497 (538)
++|.. |.....
T Consensus 459 iv~~~~gd~nas 470 (573)
T PRK13206 459 IAWAAMGDANAS 470 (573)
T ss_pred EEEecCCChhhc
Confidence 99987 666554
No 58
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=3.4e-33 Score=281.47 Aligned_cols=341 Identities=18% Similarity=0.251 Sum_probs=217.0
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC------------
Q 009282 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG------------ 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~------------ 120 (538)
++|+|++|+++.. ..+++|+|+||+|++|++.. ++.++||++|++| |||||+|+|+......
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~---~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~~~~ 77 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV---HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLDELV 77 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC---CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHHHHc
Confidence 6899999999765 36789999999999999752 3468999999999 9999999999875210
Q ss_pred ------------CCChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-ecCChh
Q 009282 121 ------------SETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEV 183 (538)
Q Consensus 121 ------------~~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 183 (538)
..++++++ ..+..++++||||++|+.... ...++...+......+...+.... ....++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~----~~~~~~~~~a~~~~~~r~~~~~~~~~~~~~~ 153 (375)
T PRK07213 78 KPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGG----IKGINLLKKASSDLPIKPIILGRPTEADENE 153 (375)
T ss_pred cCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcC----hhHHHHHHHHHHcCCCceEEecCCCcccchh
Confidence 11223322 224456899999999974221 111222222211111111111000 111122
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hhhHHHHHHHHHHcCCCCccccccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
..+.++...+. ..++ ..++...++.+.++++++.|+++|+++++|+.+ ..+..... ..+|..
T Consensus 154 ~~~~~~~~~~~--~~g~----~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~---~~~G~~-------- 216 (375)
T PRK07213 154 LKKEIREILKN--SDGI----GLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL---EKYGMT-------- 216 (375)
T ss_pred hHHHHHHHHHh--cccc----cccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH---HHcCCC--------
Confidence 23333333311 1222 334445678999999999999999999999944 33322222 123321
Q ss_pred CCchHHHHHHHHHHHHHHHcCCC-EEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~-~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
.++.+.+ .|.. -.+.|+...++ +.++++++.|+.++.||.+ ++..+.++
T Consensus 217 --------~v~~~~~----~G~~~~~i~H~~~~~~-~~i~~la~~g~~v~~~P~s-------------n~~l~~g~---- 266 (375)
T PRK07213 217 --------EIERLIN----LGFKPDFIVHATHPSN-DDLELLKENNIPVVVCPRA-------------NASFNVGL---- 266 (375)
T ss_pred --------hHHHHHh----cCCCCCEEEECCCCCH-HHHHHHHHcCCcEEECCcc-------------hhhhccCC----
Confidence 1222332 2322 14799998887 8899999999999999886 22222221
Q ss_pred CCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhH
Q 009282 342 PIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTST 421 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~ 421 (538)
.++++++++|+++++|||..+.+.. .+...++.+....++++.++|+++|.
T Consensus 267 --------~~v~~l~~~Gv~v~lGTD~~~~~~~---------------------~~~~e~~~~~~~~~~~~~~~l~~aT~ 317 (375)
T PRK07213 267 --------PPLNEMLEKGILLGIGTDNFMANSP---------------------SIFREMEFIYKLYHIEPKEILKMATI 317 (375)
T ss_pred --------ccHHHHHHCCCEEEEeeCCCCCchH---------------------hHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 2388999999999999997543211 11111212223346999999999999
Q ss_pred hHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 422 ECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 422 ~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
|+|+++|++ ++|+|++||.||||++|.+.+. + ..++.....|.+. ..+|..|||||+.
T Consensus 318 ~gA~~lg~~-~~G~l~~G~~ADlvv~d~~~~~--p---~~dp~~~lV~~~~--~~~v~~v~v~G~~ 375 (375)
T PRK07213 318 NGAKILGLI-NVGLIEEGFKADFTFIKPTNIK--F---SKNPYASIITRCE--SGDIVNKILKGKL 375 (375)
T ss_pred HHHHHhCCC-CcCCcCCCCcccEEEEcCcccc--c---cCCchHHHhhhcc--CCCceEEEECCcC
Confidence 999999995 5999999999999999975322 1 2344444555543 4689999999973
No 59
>PRK13985 ureB urease subunit beta; Provisional
Probab=100.00 E-value=4.5e-33 Score=279.25 Aligned_cols=350 Identities=17% Similarity=0.214 Sum_probs=225.2
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
..+++|+|++|++..+...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P-- 141 (568)
T PRK13985 64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 141 (568)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCc--
Confidence 56899999999997666788999999999999974211 2367999999999999999999998654
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCC-----C---CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN-----G---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+ . ...++++||||+++++..+. . .....++...+......++++++.... .+..+++.++
T Consensus 142 ~-----~----~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~~pvn~gf~gkG~---~~~l~eL~el 209 (568)
T PRK13985 142 Q-----Q----IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLGKGN---SSNDASLADQ 209 (568)
T ss_pred c-----H----HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhccCccEEEecCCc---cCCHHHHHHH
Confidence 2 1 24589999999998532211 0 122223444444444557777765332 2335677777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|.+.++ ..+...+.+.++.|.+++.++.+|+.+..+.....
T Consensus 210 ~-~aGA~GfK~~ed~----g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~g~~E-------------------------- 258 (568)
T PRK13985 210 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVE-------------------------- 258 (568)
T ss_pred H-HcCCEEEEECCcc----CCCHHHHHHHHHHHHHcCCEEEEeCCCCCCchhhH--------------------------
Confidence 6 7899999976443 46889999999999999999999997765421100
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCC-cEEEecccccc------------------ccCcccccCCCcc
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ-RVIGEPVVSGL------------------VLDDSWLWHSDFV 332 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~-~v~~~~~~~~~------------------~~~~~~~~~~~~~ 332 (538)
. .++...|..+|..|......-..-+.++-.+. +|....+.... ++++..-++..|.
T Consensus 259 ---~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa 334 (568)
T PRK13985 259 ---D-TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFA 334 (568)
T ss_pred ---H-HHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhh
Confidence 0 22344677889999876332122222332222 12222111111 1222221111111
Q ss_pred cccceeecCCCCCcccHHHHH-HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh-cC--
Q 009282 333 TAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SG-- 408 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~-~~-- 408 (538)
. .|.+.+..+.. -+++.|+...++||+.....-.. ... ++-....++.. .|
T Consensus 335 ~---------srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge-----~~~-----------r~~q~a~k~~~~~g~l 389 (568)
T PRK13985 335 D---------SRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGE-----VIT-----------RTWQTADKNKKEFGRL 389 (568)
T ss_pred h---------hhccccccccCchhhhCCcEEEEeccchhhCcccc-----eee-----------ehHHHHHHHHHhcCCC
Confidence 1 11112222222 36677999999999764433211 111 11111112222 23
Q ss_pred --------CCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEE
Q 009282 409 --------QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 480 (538)
Q Consensus 409 --------~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (538)
.++.++||+++|.|||+++|+++++|+|++||.|||||||.+++ ..++..
T Consensus 390 ~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f----------------------~~~pe~ 447 (568)
T PRK13985 390 KEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF----------------------GVKPNM 447 (568)
T ss_pred CCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccC----------------------CCChhe
Confidence 35666999999999999999999999999999999999998765 235789
Q ss_pred EEECCEEEEEC-Ceeecc
Q 009282 481 TIAGGRVVWEN-DELNVV 497 (538)
Q Consensus 481 V~v~G~~V~~~-~~~~~~ 497 (538)
||++|+++|.. |.-...
T Consensus 448 vi~~G~iv~~~~gd~n~s 465 (568)
T PRK13985 448 IIKGGFIALSQMGDANAS 465 (568)
T ss_pred EEECCEEEEccCCCCCCC
Confidence 99999999997 554443
No 60
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=2.3e-33 Score=290.19 Aligned_cols=369 Identities=14% Similarity=0.089 Sum_probs=229.9
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeC-CEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C----------
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVED-GIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~-grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~---------- 120 (538)
..++++++.+.++ ...+++|+|+| |||++||+... ++ .++..|++|+|||||+|+|+++... |
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~v~i~~~grI~~vg~~~~-~~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~~~~~ 77 (456)
T PRK09229 3 TTLFAERALLPDG-WARNVRLTVDADGRIAAVEPGAA-PA---GAERLAGPVLPGMPNLHSHAFQRAMAGLTEVRGPPQD 77 (456)
T ss_pred hhHHHHHhhCCCc-cccCcEEEEecCCeEEEecCCCC-Cc---cccccCcEEccCcccccccHhhHhhcCcccccCCCCC
Confidence 3455666666333 23678999999 99999998543 22 2456899999999999999874411 0
Q ss_pred --------------CCChhhHHH----HHHHHHhCCcEEEecccCCCC-----------CCHHHHHHHHHHHhcccceee
Q 009282 121 --------------SETIDDFFS----GQAAALAGGTTMHIDFVIPIN-----------GSLTAGFEAYEKKAKNSCMDY 171 (538)
Q Consensus 121 --------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 171 (538)
..++++++. .+..++++||||+.|+..... ......+++..+.+.+..+..
T Consensus 78 ~l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~~~~~ 157 (456)
T PRK09229 78 SFWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAGIGLTLLP 157 (456)
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcCCEEEece
Confidence 012222211 234458899999998742210 012444555555555533322
Q ss_pred eeee--ee---ec---------CChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 172 GFHM--AI---TK---------WDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 172 ~~~~--~~---~~---------~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
..+. .. .. ..++..+..+.+.+. .+...+.+.+.+++...++.+.++++++.| ++|+++++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~A-~~g~~i~~H~~ 236 (456)
T PRK09229 158 VLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAPHSLRAVTPDQLAAVLALA-APDGPVHIHIA 236 (456)
T ss_pred eeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeCCCCCCCCHHHHHHHHHHh-cCCCceEEEeC
Confidence 1111 00 00 001122223333321 223456666777777788999999999999 99999999994
Q ss_pred -ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecc
Q 009282 237 -NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 237 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
+..+.....+ ..|... ++ .+.....++.++.+.||...++ ++++++++.|+.+++||.
T Consensus 237 e~~~e~~~~~~---~~g~~~----------------~~-~l~~~g~l~~~~~l~H~~~l~~-~d~~~la~~g~~v~~~P~ 295 (456)
T PRK09229 237 EQTKEVDDCLA---WSGARP----------------VE-WLLDHAPVDARWCLVHATHLTD-AETARLARSGAVAGLCPT 295 (456)
T ss_pred CCHHHHHHHHH---HcCCCH----------------HH-HHHHcCCCCCCeEEEeeccCCH-HHHHHHHHcCCeEEECch
Confidence 3433333322 233221 11 1122335577889999999887 889999999999999887
Q ss_pred ccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhh
Q 009282 316 VSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE 395 (538)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 395 (538)
+ ++..+.+. .+++.++++|+++++|||...... +|. ++
T Consensus 296 s-------------n~~lg~g~------------~p~~~l~~~Gv~v~lGtD~~~~~d--------~~~---------~~ 333 (456)
T PRK09229 296 T-------------EANLGDGI------------FPAVDYLAAGGRFGIGSDSHVSID--------LVE---------EL 333 (456)
T ss_pred h-------------hhhhcCCC------------CCHHHHHHCCCeEEEecCCCCCCC--------HHH---------HH
Confidence 5 22222222 227899999999999999643211 111 12
Q ss_pred hHHHHHHHhhh---------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCC
Q 009282 396 RMHLVWDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDT 466 (538)
Q Consensus 396 ~~~~~~~~~~~---------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~ 466 (538)
......++... ...++..++|+++|.|+|+++|+ .+|+|++||+|||||+|.+.+...+. ...++...
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~--~~GsLe~Gk~ADlvvld~~~~~~~~~-~~~~~~~~ 410 (456)
T PRK09229 334 RLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR--AIGGLAVGARADLVVLDLDHPALAGR-EGDALLDR 410 (456)
T ss_pred HHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC--CcCCcCCCCccCEEEEeCCCccccCC-ChhhHHHH
Confidence 22222212110 13468999999999999999999 58999999999999999887533221 00111122
Q ss_pred CccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 467 NVYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 467 ~~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
..|.+. ..+|..|||+|++||++|+++
T Consensus 411 lv~~~~--~~~V~~v~V~G~~v~~~g~~~ 437 (456)
T PRK09229 411 WVFAGG--DAAVRDVWVAGRWVVRDGRHR 437 (456)
T ss_pred HhhcCC--CCCeeEEEECCEEEEECCccC
Confidence 233322 458999999999999999854
No 61
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=7.4e-33 Score=278.97 Aligned_cols=348 Identities=18% Similarity=0.175 Sum_probs=226.8
Q ss_pred cccEEEECcEEEcCC-CceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeecccccccccccccc
Q 009282 52 SSKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~-~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~ 118 (538)
..+++|+|++|+|+. +...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~P- 145 (569)
T PRK13308 67 ALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSA- 145 (569)
T ss_pred cCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCc-
Confidence 568999999999864 45688999999999999874311 2357899999999999999999999764
Q ss_pred CCCCChhhHHHHHHHHHhCCcEEEecccCCC----CCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHH
Q 009282 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI----NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (538)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (538)
++ .++++++||||+++++..+ .......++...+......++++++..... ....++.++. +
T Consensus 146 -g~---------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~~pvN~g~~gkG~~---s~~aeL~eli-~ 211 (569)
T PRK13308 146 -QL---------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEAWPVNFGFLGRGNS---SKPAALIEQV-E 211 (569)
T ss_pred -cH---------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhcCCccEEEEcCCcc---cCHHHHHHHH-H
Confidence 21 3788999999999863222 113444455555555455688887754322 3356777777 7
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHH
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~ 274 (538)
.|+.++|++.++ ..+.+.+.+.++.|+++++++.+|+....+.. ++ +.
T Consensus 212 aGA~GfKi~ed~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~g-~~------------------------E~--- 259 (569)
T PRK13308 212 AGACGLKIHEDW----GAMPAAIDTCLEVADEYDFQVQLHTDTLNESG-FV------------------------ED--- 259 (569)
T ss_pred CCCCEEeecCCC----CCCHHHHHHHHHHHHhcCCEEEEeCCCcCcch-HH------------------------HH---
Confidence 899999987554 34789999999999999999999997754321 11 11
Q ss_pred HHHHHHHcCCCEEEEeccCHH---HHHHHHHHHHcCC-cEEEecccccc---------------ccCcccccCCCccccc
Q 009282 275 AIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVVSGL---------------VLDDSWLWHSDFVTAA 335 (538)
Q Consensus 275 ~l~~~~~~~~~~~~~h~~~~~---~~~~i~~~~~~g~-~v~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 335 (538)
.++...|..+|+.|..... ..+.++.....++ +-+.+|+-.+. ++++..-++..|..
T Consensus 260 --t~~a~~gr~iH~~H~egaggghapd~l~~~~~~n~lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~-- 335 (569)
T PRK13308 260 --TLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPSSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAE-- 335 (569)
T ss_pred --HHHHhcCCeEEEEeccCCccCchhHHHHHhCCCCccCCCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhh--
Confidence 1233447788999987632 2133433333332 11122221110 12222222112211
Q ss_pred ceeecCCCCCcccHHHHH-HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHH-HHHHhh-hcCCCCH
Q 009282 336 KYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL-VWDTMV-ESGQISV 412 (538)
Q Consensus 336 ~~~~~p~~r~~~~~~~l~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~-~~~~~~-~~~~ls~ 412 (538)
.|.+.+..+.. -+++.|+...++||+........ .....+ ...+.. ..|.|+.
T Consensus 336 -------srir~~ti~ae~~l~d~g~~s~~~sds~~mgr~~e-----------------~i~r~~q~a~~~~~~~g~l~~ 391 (569)
T PRK13308 336 -------SRIRAQTIAAEDVLHDIGAISMLGSDSQGMGRIAE-----------------VIARTWQLASKMKDQRGPLPE 391 (569)
T ss_pred -------hhccceeeccCchhhcCCcEEEEecchHHHhHHHH-----------------HHHHHHHHHHHHhhcCCCCCc
Confidence 11111222222 36677999999999764433211 111111 112222 3566877
Q ss_pred HH-----------HHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 413 TD-----------YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 413 ~e-----------al~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
++ .|+++|.|||+++|+++.+|+|++||.||||+|+++.+ ..++..|
T Consensus 392 ~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~f----------------------gv~p~~t 449 (569)
T PRK13308 392 DRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFF----------------------GIKPELV 449 (569)
T ss_pred ccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCccc----------------------CCCeeEE
Confidence 76 79999999999999988899999999999999997643 2357899
Q ss_pred EECCEEEEEC-Ceeec
Q 009282 482 IAGGRVVWEN-DELNV 496 (538)
Q Consensus 482 ~v~G~~V~~~-~~~~~ 496 (538)
|++|+++|.. |.-..
T Consensus 450 i~~G~iv~~~~gd~n~ 465 (569)
T PRK13308 450 IKGGFPAWAAMGDANG 465 (569)
T ss_pred EECCEEEEecCCCCCc
Confidence 9999999875 44443
No 62
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=100.00 E-value=1.1e-32 Score=277.65 Aligned_cols=349 Identities=18% Similarity=0.192 Sum_probs=229.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCC------------CCCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN------------VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~------------~~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
..+++|+|++|++..+...++|.|+||||++|++... ...++++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P-- 141 (567)
T cd00375 64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICP-- 141 (567)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCc--
Confidence 5689999999999776678999999999999987531 11357899999999999999999998654
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCC-----C---CCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----N---GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
++ ..+++++||||+++++..+ . ......++...+......++++++... +.+...++.++
T Consensus 142 ~~---------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~~pin~g~~gkg---~~~~l~eL~e~ 209 (567)
T cd00375 142 QQ---------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADGLPVNIGFLGKG---NGSSPDALAEQ 209 (567)
T ss_pred cH---------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhcCCceEEEEecC---ccccHHHHHHH
Confidence 21 4788999999999963222 1 123455555555555566788777532 23446677777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|++.++ ..+...+.+.++.|.+++.++.+|+.+..+....
T Consensus 210 ~-~aGA~GfK~~eD~----g~t~~~i~~aL~~A~~~dv~VaiHadtlne~g~~--------------------------- 257 (567)
T cd00375 210 I-EAGACGLKLHEDW----GATPAAIDTCLSVADEYDVQVAIHTDTLNESGFV--------------------------- 257 (567)
T ss_pred H-HcCCEEEEecCCC----CCCHHHHHHHHHHHHhhCCEEEEECCCCCcchHH---------------------------
Confidence 6 7899999987554 3489999999999999999999999775432111
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHH---HHHHHHHHHcCCcEEEecccccc------------------ccCcccccCCC
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGQRVIGEPVVSGL------------------VLDDSWLWHSD 330 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~---~~~i~~~~~~g~~v~~~~~~~~~------------------~~~~~~~~~~~ 330 (538)
+. .++...|..+|..|...... .+.++.....+ |.++.+.... ++++..-++..
T Consensus 258 --E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~n--vlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~ 332 (567)
T cd00375 258 --ED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPN--VLPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVA 332 (567)
T ss_pred --HH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCC--cccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhh
Confidence 01 23456678889999876332 13333222222 2222211111 12222221111
Q ss_pred cccccceeecCCCCCcccHHHHH-HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh-cC
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SG 408 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~-~~ 408 (538)
|.. .|.+.+..+.. -+++.|+...++||+.....-.. ... ++-....++.. .|
T Consensus 333 fa~---------srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge-----~~~-----------r~~q~a~k~~~~~g 387 (567)
T cd00375 333 FAE---------SRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGE-----VIL-----------RTWQTAHKMKAQRG 387 (567)
T ss_pred hhh---------hhccchhhccchhhhccCcEEEEccchhhcCccce-----eee-----------chHHHHHHHHHhcC
Confidence 211 12222222233 35667999999999764433211 111 11111223333 22
Q ss_pred -------CCCHHHH---HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEE
Q 009282 409 -------QISVTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKV 478 (538)
Q Consensus 409 -------~ls~~ea---l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 478 (538)
+.+...+ |+++|+|||+++|+++.+|+|++||.||||||+.+.+ ..++
T Consensus 388 ~~~~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f----------------------~~~p 445 (567)
T cd00375 388 PLPEDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFF----------------------GVKP 445 (567)
T ss_pred CCCcccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCccc----------------------CCCe
Confidence 2344444 9999999999999999999999999999999997744 2357
Q ss_pred EEEEECCEEEEEC-CeeeccC
Q 009282 479 EVTIAGGRVVWEN-DELNVVP 498 (538)
Q Consensus 479 ~~V~v~G~~V~~~-~~~~~~~ 498 (538)
..||++|++||.. |++....
T Consensus 446 ~~vi~~G~iv~~~~gd~nasi 466 (567)
T cd00375 446 EMVLKGGFIAYAQMGDPNASI 466 (567)
T ss_pred eEEEECCEEEEecCCCccccC
Confidence 8999999999998 7776653
No 63
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.2e-32 Score=280.62 Aligned_cols=356 Identities=17% Similarity=0.176 Sum_probs=226.0
Q ss_pred cccEEEECcEEEcC-CCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeecccccccccccccc
Q 009282 52 SSKILIKGGTVVNA-HHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (538)
Q Consensus 52 ~~~~~i~n~~vv~~-~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~ 118 (538)
..+++|+|++|+|+ .+...++|.|+||||++||+.... ..++++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P- 145 (572)
T PRK13309 67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISP- 145 (572)
T ss_pred cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCc-
Confidence 45799999999996 355789999999999999874321 1247899999999999999999998765
Q ss_pred CCCCChhhHHHHHHHHHhCCcEEEecccCCC-----C---CCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHH
Q 009282 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI-----N---GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEV 190 (538)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (538)
++ .++++++||||+++++..+ . ......++...+......++++++.... .....++.+
T Consensus 146 -~~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~~pvn~g~~gkg~---~~~~~~l~e 212 (572)
T PRK13309 146 -QQ---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEGLPVNVGILGKGN---SYGRGPLLE 212 (572)
T ss_pred -ch---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhccCCcCEEEEcCCC---CCCHHHHHH
Confidence 21 3579999999999643211 1 1334455555555555567777765322 122356666
Q ss_pred HHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHH
Q 009282 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 191 ~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (538)
+. +.|+.++|++.++ ..+.+.+.+.++.|++++.++.+|+.+..+.....
T Consensus 213 l~-~aGa~gfk~~~d~----g~t~~~L~~aLe~A~~~gv~VaiH~d~lnE~g~vE------------------------- 262 (572)
T PRK13309 213 QA-IAGVAGYKVHEDW----GATAAALRHALRVADEVDIQVAVHTDSLNECGYVE------------------------- 262 (572)
T ss_pred HH-hcCcEEEEecCcC----CcCHHHHHHHHHHHHhcCCEEEEeCCccccchhHH-------------------------
Confidence 66 7899999987554 24889999999999999999999987654321111
Q ss_pred HHHHHHHHHHHcCCCEEEEeccCHH---HHHHHHHHHHcCC-cEEEeccccc---------------cccCcccccCCCc
Q 009282 271 ATTRAIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVVSG---------------LVLDDSWLWHSDF 331 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h~~~~~---~~~~i~~~~~~g~-~v~~~~~~~~---------------~~~~~~~~~~~~~ 331 (538)
.. ++...+.++|..|..... ..+.++.....++ +-+.+|+..+ .++++..-++..|
T Consensus 263 ----~~-~aa~~grpih~~H~~Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~ 337 (572)
T PRK13309 263 ----DT-IDAFEGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAF 337 (572)
T ss_pred ----HH-HHHhCCCceeeeeccCcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChhH
Confidence 11 234445666777765422 1122222222221 1111111111 0122222221111
Q ss_pred ccccceeecCCCCCc-ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHH--H----h
Q 009282 332 VTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWD--T----M 404 (538)
Q Consensus 332 ~~~~~~~~~p~~r~~-~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~--~----~ 404 (538)
.. .|.. +...+...++++|+.++++||++...... .+++.. ++........ . .
T Consensus 338 a~---------srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~----~~p~~~-------iq~Av~rk~~~g~l~~~~ 397 (572)
T PRK13309 338 AE---------SRVRPETIAAENVLHDMGVISMFSSDSQAMGRVG----ENWLRA-------IQTADAMKAARGKLPEDA 397 (572)
T ss_pred HH---------HhhCchhhcchhHHHhCCCEEEEcCCCCcccCCc----ccHHHH-------HHHHHHHHhccCCCCccC
Confidence 11 0111 22355678999999999999976431100 011110 0000000000 0 0
Q ss_pred hhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEEC
Q 009282 405 VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 484 (538)
Q Consensus 405 ~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~ 484 (538)
.....++..+||++.|.|||+++|+++.+|+|++||.|||||||++.+ ..++..||++
T Consensus 398 ~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f----------------------~~~~~~vi~~ 455 (572)
T PRK13309 398 AGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFF----------------------GAKPKMVIKG 455 (572)
T ss_pred CCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhc----------------------CCCccEEEEC
Confidence 012347888999999999999999999999999999999999997754 2357899999
Q ss_pred CEEEEEC-CeeeccC
Q 009282 485 GRVVWEN-DELNVVP 498 (538)
Q Consensus 485 G~~V~~~-~~~~~~~ 498 (538)
|++||.. |++....
T Consensus 456 G~iv~~~~gd~~as~ 470 (572)
T PRK13309 456 GMINWAAMGDPNASL 470 (572)
T ss_pred CEEEEecCCCccccC
Confidence 9999998 8877654
No 64
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=2.1e-33 Score=285.22 Aligned_cols=368 Identities=15% Similarity=0.082 Sum_probs=224.1
Q ss_pred EEEECcEEEcCCC---c-eeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-CC-----
Q 009282 55 ILIKGGTVVNAHH---Q-QIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----- 121 (538)
Q Consensus 55 ~~i~n~~vv~~~~---~-~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~----- 121 (538)
.+|+|++|++++. . ++++|+|+ |+|++||+.... .++.++||+.|++|+|||||+|+|+..... +.
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~ 80 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD 80 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence 5799999998773 2 68899999 999999974321 224568999999999999999999975421 10
Q ss_pred --------------CChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChh
Q 009282 122 --------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (538)
Q Consensus 122 --------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (538)
.+++..+ .....++++||||+.|+.... ...++..+.+.+..+.............+
T Consensus 81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~-----~~~~a~~~~GiR~~~~~~~~~~~~~~~~~ 155 (408)
T PRK08418 81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAISSFG-----IDLEICAKSPLRVVFFNEILGSNASAVDE 155 (408)
T ss_pred hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEeecch-----hhHHHHHhcCCeEEEEeeeeCCCccchhh
Confidence 0111111 123456899999999875321 12344555555543321111100000011
Q ss_pred hHHHHHHHHHH---cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHHcCCC-Cccc
Q 009282 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGIT-GPEG 258 (538)
Q Consensus 184 ~~~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~~~~~g~~-~~~~ 258 (538)
....+...... ...+.++..+.+++.+.++++.++++.+.|+++|+++++|+. +..+.....+ ..|.. ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~---~~G~~~~~~~ 232 (408)
T PRK08418 156 LYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEE---SKGWFKKFFE 232 (408)
T ss_pred hHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHh---ccCchhhhhh
Confidence 11111111111 123457777788888899999999999999999999999995 4444333322 12210 0000
Q ss_pred cccc-CCchHHHHHHHHHHHHHHHc-CCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccc
Q 009282 259 HALS-RPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (538)
Q Consensus 259 ~~~~-~~~~~~~~~i~~~l~~~~~~-~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (538)
.... .++ ....++..... +.++.+.|+.+.++ ++++++++.|..|++||.+ ++..+.+
T Consensus 233 ~~~~~~~~------~~~pv~~l~~~g~~~~~~~H~~~~~~-~di~~la~~g~~v~~cP~s-------------n~~lg~g 292 (408)
T PRK08418 233 KFLKEPKP------LYTPKEFLELFKGLRTLFTHCVYASE-EELEKIKSKNASITHCPFS-------------NRLLSNK 292 (408)
T ss_pred hhcccccc------cCCHHHHHHHhCCCCeEEEecccCCH-HHHHHHHHcCCcEEECHhH-------------HHHhcCC
Confidence 0000 000 00111112222 46889999999887 8999999999999999876 3333333
Q ss_pred eeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHH
Q 009282 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (538)
Q Consensus 337 ~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal 416 (538)
. .++.+++++|+++++|||+...+....+ +. ++.......+... ...+++++|
T Consensus 293 ~------------~p~~~~~~~Gi~v~lGtD~~~~~~~~~~-----~~---------em~~~~~~~~~~~-~~~~~~~~l 345 (408)
T PRK08418 293 A------------LDLEKAKKAGINYSIATDGLSSNISLSL-----LD---------ELRAALLTHANMP-LLELAKILL 345 (408)
T ss_pred C------------ccHHHHHhCCCeEEEeCCCCCCCCCcCH-----HH---------HHHHHHHHhccCC-ccccHHHHH
Confidence 2 2288999999999999997544332211 11 2222111111111 113468999
Q ss_pred HHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEE
Q 009282 417 RLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 488 (538)
Q Consensus 417 ~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V 488 (538)
+++|.|+|+++|++ .|+|++||.||||++|.+.+.. +. .+.|+........|..|||+|++|
T Consensus 346 ~~aT~~gA~alg~~--~G~l~~G~~ADlv~~d~~~~~~-~~-------~~~~~~~~~~~~~v~~v~v~G~~v 407 (408)
T PRK08418 346 LSATRYGAKALGLN--NGEIKEGKDADLSVFELPEECT-KK-------EQLPLQFILHAKEVKKLFIGGKEV 407 (408)
T ss_pred HHHHHHHHHHhCCC--CccccCCCccCEEEEeCCCCCC-Ch-------hHhHHHHHhccCccceEEECCEEc
Confidence 99999999999994 6999999999999999763211 10 011222111135899999999987
No 65
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=1.7e-32 Score=278.62 Aligned_cols=352 Identities=18% Similarity=0.202 Sum_probs=225.7
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCC----------CCCCceEEecCCCeeeccccccccccccccCCC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN----------VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~----------~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~ 121 (538)
+++++|+|++|++..+...++|+|+||||++|++... .+.+.++||++|++|+|||||+|+|+..+ +.
T Consensus 66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P--~~ 143 (568)
T PRK13207 66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICP--QQ 143 (568)
T ss_pred cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCccc--cH
Confidence 5689999999999866678999999999999987421 11367899999999999999999998655 21
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC--------CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (538)
.++++++||||+++++..+.. .....+....+......++++++... ..+..+++.++.
T Consensus 144 ---------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~~pin~g~~g~g---~~~~~~~L~e~i- 210 (568)
T PRK13207 144 ---------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADAFPMNIGFLGKG---NASLPEALEEQI- 210 (568)
T ss_pred ---------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhcCCceEEEEcCC---CcccHHHHHHHH-
Confidence 477899999999998432211 11223333333333455667666532 234466777777
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
+.|+.++|++.++ ..+.+.+.++++.|+++|.++.+|+.+..+.. +.+.
T Consensus 211 ~aGA~gfKi~~d~----g~t~~~l~~aL~~A~~~gv~V~iHa~tlne~G-~~e~-------------------------- 259 (568)
T PRK13207 211 EAGAIGLKLHEDW----GATPAAIDNCLSVADEYDVQVAIHTDTLNESG-FVED-------------------------- 259 (568)
T ss_pred HcCCCEEeecCCC----CCCHHHHHHHHHHHHHhCCEEEEeCCCcccch-HHHH--------------------------
Confidence 7899999988654 24889999999999999999999997654321 1111
Q ss_pred HHHHHHHHcCCCEEEEeccC---HHHHHHHHHHHHcCCc-EEEecccccc---------------ccCcccccCCCcccc
Q 009282 274 RAIRLAEFVNTPLYVVHVMS---MDAMEEIAKARKAGQR-VIGEPVVSGL---------------VLDDSWLWHSDFVTA 334 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~---~~~~~~i~~~~~~g~~-v~~~~~~~~~---------------~~~~~~~~~~~~~~~ 334 (538)
.++...+..+|..|... ....+.++.+...++. -+.+|+..+. +++++.-++..|..
T Consensus 260 ---t~~a~~g~~iH~~H~egaggghapdii~~~~~~~v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~- 335 (568)
T PRK13207 260 ---TIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGEPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAE- 335 (568)
T ss_pred ---HHHhcCCCEEEEEeecCCCcCCchHHHHHhhcCCCccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhh-
Confidence 12233456678888652 1222677777776642 2222222110 12222211111211
Q ss_pred cceeecCCCCCcccHHHH-HHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCC---
Q 009282 335 AKYVMSPPIRASGHNKAL-QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQI--- 410 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l-~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~l--- 410 (538)
.|.+.+..+. .-+++.|+..+++||++....-. .+++. .+..........|.+
T Consensus 336 --------srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~----~~~~r-----------~~q~A~~r~~~~G~~~~d 392 (568)
T PRK13207 336 --------SRIRRETIAAEDILHDLGAISMISSDSQAMGRVG----EVIIR-----------TWQTAHKMKVQRGPLPGD 392 (568)
T ss_pred --------hhccceeecccchhhhCCCEEEecCCcccccccc----cchhH-----------HHHHHHHHHHccCCCCcc
Confidence 1111111122 23778899999999987442100 00111 111111000011222
Q ss_pred ----CHHHH---HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEE
Q 009282 411 ----SVTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 483 (538)
Q Consensus 411 ----s~~ea---l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v 483 (538)
+.+.+ |+++|+|||+++|+++.+|+|++||.||||||+.+.+ ..++..||+
T Consensus 393 ~~~~~n~ri~~~l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f----------------------~~~~~~ti~ 450 (568)
T PRK13207 393 SGRNDNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFF----------------------GVKPELVLK 450 (568)
T ss_pred cccCccchHHHHHHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhc----------------------CCCceEEEE
Confidence 11222 9999999999999988899999999999999997643 235789999
Q ss_pred CCEEEEEC-CeeeccC
Q 009282 484 GGRVVWEN-DELNVVP 498 (538)
Q Consensus 484 ~G~~V~~~-~~~~~~~ 498 (538)
+|+++|.. |++....
T Consensus 451 ~G~iv~~~~gd~~as~ 466 (568)
T PRK13207 451 GGMIAWAPMGDPNASI 466 (568)
T ss_pred CCEEEEecCCCccccC
Confidence 99999998 8887764
No 66
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1.1e-32 Score=281.62 Aligned_cols=349 Identities=17% Similarity=0.109 Sum_probs=220.8
Q ss_pred CCCc-eeeeE-EEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC---------------------
Q 009282 65 AHHQ-QIADV-YVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------------------- 121 (538)
Q Consensus 65 ~~~~-~~~~V-~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~--------------------- 121 (538)
+++. ++++| +|+||||++||+... .++||+.|++|+|||||+|+|++......
T Consensus 4 ~~~~~~~~~i~~v~~g~I~~Vg~~~~----~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~~~~~ 79 (418)
T cd01313 4 PEGWERNVRIEVDADGRIAAVNPDTA----TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRELMYR 79 (418)
T ss_pred CCceecCeEEEEeCCCeEEEecCCCC----CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHHHHHH
Confidence 4444 57899 999999999998542 35699999999999999999998752110
Q ss_pred ----CChhhHHH----HHHHHHhCCcEEEecccCCCC-----------CCHHHHHHHHHHHhcccceeeeeeee--e--e
Q 009282 122 ----ETIDDFFS----GQAAALAGGTTMHIDFVIPIN-----------GSLTAGFEAYEKKAKNSCMDYGFHMA--I--T 178 (538)
Q Consensus 122 ----~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~ 178 (538)
.++++++. .+..++++||||++|+..... .......++..+.+.+..+...+... . .
T Consensus 80 ~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~~~~~ 159 (418)
T cd01313 80 FAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAGFGGP 159 (418)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccCCCCC
Confidence 12222221 233458899999999753211 01233455555555554332222110 0 0
Q ss_pred c-C---------ChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHH
Q 009282 179 K-W---------DEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQK 246 (538)
Q Consensus 179 ~-~---------~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~ 246 (538)
. . .++..+.+.++... .....+...+.+++...++.+.++++++.|++ |+++++|+. +..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e~~~~~- 237 (418)
T cd01313 160 APNPGQRRFINGYEDFLGLLEKALRAVKEHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKEVDDCL- 237 (418)
T ss_pred CCchhhhhhcccHHHHHHHHHHHhhhhccCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHHHHHHH-
Confidence 0 0 01122222222111 12234566666677777899999999999999 999999994 333222222
Q ss_pred HHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccc
Q 009282 247 RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (538)
Q Consensus 247 ~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (538)
..+|... ++.+.+ ...++.++.+.||...++ ++++++++.|+.+++||.+
T Consensus 238 --~~~g~~~----------------i~~l~~-~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~~P~s---------- 287 (418)
T cd01313 238 --AAHGRRP----------------VELLLD-HGHLDARWCLVHATHLTD-NETLLLGRSGAVVGLCPTT---------- 287 (418)
T ss_pred --HHcCCCH----------------HHHHHH-cCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEECCCc----------
Confidence 2233321 111222 245678899999999887 8899999999999999875
Q ss_pred cCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh
Q 009282 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE 406 (538)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 406 (538)
++..+.+. + ++++++++|+++++|||.....+ ++. ++.....+.+...
T Consensus 288 ---n~~lg~g~---~---------p~~~l~~~Gv~v~lGtD~~~~~d--------~~~---------~~~~~~~~~~~~~ 335 (418)
T cd01313 288 ---EANLGDGI---F---------PAAALLAAGGRIGIGSDSNARID--------LLE---------ELRQLEYSQRLRD 335 (418)
T ss_pred ---hhhccCCC---C---------CHHHHHHCCCcEEEecCCCCCcC--------HHH---------HHHHHHHHHHHHh
Confidence 22222221 2 27899999999999999643211 111 1222222212211
Q ss_pred --------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEE
Q 009282 407 --------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKV 478 (538)
Q Consensus 407 --------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 478 (538)
...++++++|+++|.|+|+++|++ .|+|++||.||||++|.+.++..+.. ..++.....|.+. ..+|
T Consensus 336 ~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~~~~~~p~~-~~~~~~~lv~~~~--~~~V 410 (418)
T cd01313 336 RARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLDHPSLAGAL-PDTLLDAWVFAAG--DREV 410 (418)
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCCCccccCCC-chhHHHHHeecCC--CCce
Confidence 236999999999999999999994 89999999999999998877665420 0122233445544 4589
Q ss_pred EEEEECCE
Q 009282 479 EVTIAGGR 486 (538)
Q Consensus 479 ~~V~v~G~ 486 (538)
..|||+|+
T Consensus 411 ~~v~V~G~ 418 (418)
T cd01313 411 RDVVVGGR 418 (418)
T ss_pred eEEEeCCC
Confidence 99999996
No 67
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.9e-32 Score=279.08 Aligned_cols=373 Identities=22% Similarity=0.321 Sum_probs=253.3
Q ss_pred cEEEECcEEEcCCCc---eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-----------
Q 009282 54 KILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----------- 119 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~----------- 119 (538)
.++++|..++..++. ++++|.|+||||+.||+..+.+++.++||++|++|+|||||+|+|+.....
T Consensus 3 ~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~~l~~ 82 (421)
T COG0402 3 MLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGPPDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDLPLLE 82 (421)
T ss_pred ceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCCCCceeecCCCCEeccCccccccchHHHHHhhhhcccchHH
Confidence 467888888876543 569999999999999997654456899999999999999999999877621
Q ss_pred -----------CCCChhhHHHH----HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee-----eeec
Q 009282 120 -----------GSETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-----AITK 179 (538)
Q Consensus 120 -----------~~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 179 (538)
...++++++.. ...++++|+|+++.............+++..+.+.+......+.. ....
T Consensus 83 wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~p~~~~~ 162 (421)
T COG0402 83 WLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVAFPDPGAE 162 (421)
T ss_pred HHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCCCCccccc
Confidence 11234444332 344689999997654333222345566677776666433333322 1111
Q ss_pred CChhhHHHHHHHH-HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMV-KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~-~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
..++ +++.+++. +..+.....+...++..+.++++.++.+.+.++++|+++++|+ ++..+.....+ ..|...
T Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~---~~g~~~-- 236 (421)
T COG0402 163 TDEE-LEETEELLREAHGLGRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE---PYGARP-- 236 (421)
T ss_pred chHH-HHHHHHHHHHHhcCCCeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh---hcCCCH--
Confidence 1111 22233333 2335556667777888888999999999999999999999999 55655554443 233221
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccce
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
+ +-+......+.+.++.|+.+... ++++.+++.|+.|++||.+ |+.++++.
T Consensus 237 --------------~-~~~~~~g~l~~~~~~~H~~~~~~-~e~~~l~~~g~~v~~cP~s-------------N~~L~sG~ 287 (421)
T COG0402 237 --------------V-ERLDLLGLLGSHTLLAHCVHLSE-EELELLAESGASVVHCPRS-------------NLKLGSGI 287 (421)
T ss_pred --------------H-HHHHHcCCCCCCeEEEEeccCCH-HHHHHHhhCCCeEEECcch-------------hccccCCC
Confidence 1 11122334456788999998887 8888899999999999997 66665552
Q ss_pred eecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhc---CCCCHHH
Q 009282 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVES---GQISVTD 414 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~---~~ls~~e 414 (538)
.| ++.+++.|+++++|||...++....++ . ++.....+++.... ..... +
T Consensus 288 --~p----------~~~~~~~gv~v~~gTD~~~~~~~~d~l-----~---------~~~~a~~l~~~~~~~~~~~~~~-~ 340 (421)
T COG0402 288 --AP----------VRRLLERGVNVALGTDGAASNNVLDML-----R---------EMRTADLLQKLAGGLLAAQLPG-E 340 (421)
T ss_pred --CC----------HHHHHHcCCCEEEecCCccccChHHHH-----H---------HHHHHHHHHHhhcCCCcccchH-H
Confidence 22 789999999999999988777644322 1 33333333333221 11222 3
Q ss_pred HHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCee
Q 009282 415 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 494 (538)
Q Consensus 415 al~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~ 494 (538)
+|+++|.|+|++||+ +++|+|++||.|||||+|.+.+...+.. +.....+... ...|..|+++|+.|+++++.
T Consensus 341 ~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~~~~----~~~~~v~~~~--~~~v~~v~~~g~~v~~~~~~ 413 (421)
T COG0402 341 ALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLAPLR----PVSRLVFAAG--GKDVDRVLVDGRLVMEDGRL 413 (421)
T ss_pred HHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCcccccc----HHHHHHHhcC--CCceeEEEECCEEEEEccee
Confidence 899999999999999 7899999999999999999876443321 1111222222 34799999999999999988
Q ss_pred e
Q 009282 495 N 495 (538)
Q Consensus 495 ~ 495 (538)
.
T Consensus 414 ~ 414 (421)
T COG0402 414 L 414 (421)
T ss_pred h
Confidence 7
No 68
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=1.3e-31 Score=267.52 Aligned_cols=360 Identities=18% Similarity=0.195 Sum_probs=220.5
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCC----CCceEEecCCCeeecccccccccccccc-CCCCChhhHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG----DDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFS 129 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~----~~~~vID~~G~~v~PGlID~H~H~~~~~-~~~~~~~~~~~ 129 (538)
++|+|++|++++.....+|+|+||||++|++..+.+ ....++|++|++|+|||||.|+|+.... .+......-+.
T Consensus 2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~ 81 (389)
T TIGR01975 2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL 81 (389)
T ss_pred EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence 589999999987666789999999999999875542 2333556699999999999999987641 11110011223
Q ss_pred HHHHHHhCCcEEEecccCCCCC-----CHHHHHHHHHHHhcccceeeeee-eeeecCChhhHHHHHHHHHHcCCcEEE-E
Q 009282 130 GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYGFH-MAITKWDEVVSDEMEVMVKEKGINSFK-F 202 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ik-~ 202 (538)
.+..++++||||++|+.+.... ...+..+.+...+-+.+...+.+ .+....++....++.. .....++| +
T Consensus 82 ~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~p~~t~t~~~~~d~~~---~d~iiG~~~i 158 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYHVPSRTITGSVESDLLL---IDKVIGVGEI 158 (389)
T ss_pred HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEcccccCCCcccccchhhheee---ehhhcccceE
Confidence 5777899999999998643221 23445555555554433332221 1222222222222221 22344553 5
Q ss_pred EeeeCCCccCCHHHHHHHHHHHHhcC----Ce--EEEEcCChh-hHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 203 FMAYKGSFMINDELLIEGFKRCKSLG----AL--AMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~~~g----~~--v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
.++.+-....+.+.+.++.+.|+..| ++ +++|..+.. ..+...+.+....+..
T Consensus 159 a~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~l~~l~~~~~~~di~~-------------------- 218 (389)
T TIGR01975 159 AISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRALQPIYELVENTDVPI-------------------- 218 (389)
T ss_pred EEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhhHHHHHHHHHhcCCCh--------------------
Confidence 56666566778999999999999988 88 999985443 2322222222222211
Q ss_pred HHHHHHcCCCEEEEeccCH-HHH-HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHH
Q 009282 276 IRLAEFVNTPLYVVHVMSM-DAM-EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQ 353 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~-~~~-~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~ 353 (538)
..++-.|+... .-. +.++.+++ |..+-.+... ....+.+ ......+.++
T Consensus 219 --------~~f~pth~~r~~~l~~~~i~~~~~-gg~iDv~~~~-----~~~~l~~---------------~~~~~~~~~~ 269 (389)
T TIGR01975 219 --------TQFLPTHINRNVPLFEAGLEFAKK-GGTIDLTSSI-----DPQFRKE---------------GEVAPAEGIK 269 (389)
T ss_pred --------hheecCccCCCHHHHHHHHHHHHh-CCcEEEeCCC-----Cccchhc---------------cccChHHHHH
Confidence 11122344321 112 44554444 4333222110 0000000 0001134678
Q ss_pred HHHhcCCce---EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 354 AALATGILQ---LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 354 ~~l~~Gv~~---~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.++++|+++ +++||.....+...+. -.....|+.+... +...++.++..+++++++||+++|.|||++||++
T Consensus 270 ~~~~~Gv~~~~i~isSD~~gs~p~~~~~----g~~~~~g~g~~~s-l~~~~~~lv~~g~ls~~eal~~~T~npA~~Lgl~ 344 (389)
T TIGR01975 270 KALEAGVPLEKVTFSSDGNGSQPFFDEN----GELTGLGVGSFET-LFEEVREAVKDGDVPLEKALRVITSNVAGVLNLT 344 (389)
T ss_pred HHHHcCCCcceEEEEeCCCCCCCccccc----cccccCCcCcHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCC
Confidence 999999974 9999975322111100 0111233444332 3344556777888999999999999999999995
Q ss_pred CCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 431 PRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 431 ~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
++|+|++|+.|||++||.+ .++..||.+|++++++|+++.+
T Consensus 345 -~~G~I~~G~~ADlvild~~-------------------------~~i~~v~~~G~~v~~~g~~~~~ 385 (389)
T TIGR01975 345 -GKGEISPGNDADLVVLDPD-------------------------LRIHSVIARGKLMVKDGKACVK 385 (389)
T ss_pred -CCCeECCCCcCCEEEEcCC-------------------------CCEEEEEECCEEEEECCEEEec
Confidence 7899999999999999965 1578999999999999998853
No 69
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-33 Score=264.91 Aligned_cols=354 Identities=23% Similarity=0.314 Sum_probs=249.7
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc--cCCCCChhhHHHHH
Q 009282 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGSETIDDFFSGQ 131 (538)
Q Consensus 55 ~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~~ 131 (538)
.+|+|++|+++... .++.|+|+||+|.+|.+ .+.|.+.++||.+|.+|+|||||.|+|.+.+ ++...+.+.+....
T Consensus 2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~~i~ 80 (380)
T COG1820 2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELPADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLETMA 80 (380)
T ss_pred ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCCCcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHHHHH
Confidence 47899999999987 46699999999999998 4467789999999999999999999999887 33345677788889
Q ss_pred HHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
+..++.|+|+++......+. .+.+.++...+... ...--.|.|++.+..+.+ +.|+...+.+
T Consensus 81 ~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ls~~----------kkGAh~~~~i------ 144 (380)
T COG1820 81 EAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGPFLSPE----------KKGAHNPEYI------ 144 (380)
T ss_pred HHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCceEEEEeecCccCHh----------hccCCCHHHh------
Confidence 99999999999966433332 44445554444433 344556777777776642 4565543322
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
...+.+++.++++.++. .+...+=+++.....+.+..+.+.|+..+.+|+++ .+++..++++. |. .+.+
T Consensus 145 r~~~~~~~~~~~~~a~g-~i~~vTlAPE~~~~~e~i~~l~~~giivs~GHS~A-----tye~~~~a~~~----Ga-~~~T 213 (380)
T COG1820 145 RPPDPEELEQLIAAADG-LIKLVTLAPELDGTKELIRLLANAGIVVSIGHSNA-----TYEQARAAFEA----GA-TFVT 213 (380)
T ss_pred CCCCHHHHHHHHhhccC-ceEEEEECCCCCCCHHHHHHHHhCCeEEEecCccc-----cHHHHHHHHHh----Cc-cEEE
Confidence 23478899999888876 56666666655555688888889999988888854 33445555544 22 2577
Q ss_pred eccCHHHHHHHHHHHHcCC--------cEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc--C
Q 009282 290 HVMSMDAMEEIAKARKAGQ--------RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--G 359 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~--------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~--G 359 (538)
|+.++- ..+. .++.|+ .++++...+.++.++.. ++-+++. +
T Consensus 214 HlfNaM--s~l~-hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~--------------------------~~ia~~~kg~ 264 (380)
T COG1820 214 HLFNAM--SGLH-HREPGVVGAALDNPDVYAEIIADGVHVHPAA--------------------------IRLALKAKGG 264 (380)
T ss_pred eeccCC--CCCC-CCCCcccceeecCCCeEEEEEccCcccCHHH--------------------------HHHHHhccCC
Confidence 776532 1121 223231 34555555555444432 3323222 3
Q ss_pred CceEEeCCCCCCChh---hhhcC------ccCcccCCCC-CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 360 ILQLVGTDHCAFNST---QKAFG------IDDFRKIPNG-VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 360 v~~~lgtD~~~~~~~---~~~~~------~~~~~~~~~g-~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
-++++-||.....-. ...++ .+.......| ++|....+...++++++.++++++||++|+|.+||+++|+
T Consensus 265 ~~i~LVTDam~a~G~~dg~y~lgg~~V~v~~g~~~~~~GtLAGS~Ltm~~avrn~v~~~~~~~~eAv~maS~~PA~~lgl 344 (380)
T COG1820 265 DKIVLVTDAMAAAGLPDGEYILGGQTVTVADGARRLEDGTLAGSTLTMDEAVRNLVEWGGISLAEAVRMASLNPAKALGL 344 (380)
T ss_pred ceEEEEEccccccCCCCccEEECCEEEEEECCEEECCCCceeeeeeeHHHHHHHHHHHhCCCHHHHHHHhhhhHHHHhCC
Confidence 468888986543222 11121 2223344455 7888888899999999999999999999999999999999
Q ss_pred CCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 430 ~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
++++|+|++||.||||+||.| -+|+.||++|+++++
T Consensus 345 ~~~~G~i~~G~~Adlvvld~d-------------------------~~v~~T~i~G~~~~~ 380 (380)
T COG1820 345 DDRLGSIKPGKDADLVVLDDD-------------------------LNVKATWINGEKVFN 380 (380)
T ss_pred cCcccccCCCcccCEEEECCC-------------------------CcEEEEEECCEEeeC
Confidence 889999999999999999955 379999999999874
No 70
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=7.6e-32 Score=272.84 Aligned_cols=315 Identities=20% Similarity=0.184 Sum_probs=203.2
Q ss_pred cEEEEC-cEEEcCCC---------ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C--
Q 009282 54 KILIKG-GTVVNAHH---------QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (538)
Q Consensus 54 ~~~i~n-~~vv~~~~---------~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~-- 120 (538)
+++|+| +.|++++. .++++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..... +
T Consensus 2 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~iD~~g~~v~PGlId~H~Hl~~~~~r~~~ 81 (382)
T PRK14085 2 STLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAPAADERVDAGGRAVLPGFVDSHSHLVFAGDRSAE 81 (382)
T ss_pred cEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCCCCCeEEeCCCCEEecCeEecCcCccccCChhHH
Confidence 578999 59999762 2578999999999999986544456789999999999999999999965311 0
Q ss_pred -----------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc--ccceee
Q 009282 121 -----------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDY 171 (538)
Q Consensus 121 -----------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 171 (538)
..+.++++. .+..++++|+||+++...... .....++.....+. ......
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T PRK14085 82 FAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGL-TVEDEARSARIAAEFTDEVTFL 160 (382)
T ss_pred HHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCC-CHHHHHHHHHHHHHhhhcceee
Confidence 112333332 345568999999998753221 22333333222111 011111
Q ss_pred eeeeeeec--CC-hhhHHHH----HHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHH
Q 009282 172 GFHMAITK--WD-EVVSDEM----EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (538)
Q Consensus 172 ~~~~~~~~--~~-~~~~~~~----~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~ 244 (538)
+.+..... .+ ++.+..+ .... ......+|++.+. ..++.++++++++.|+++|+++.+|+.+.... ..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~-~~ 235 (382)
T PRK14085 161 GAHVVPPEYAGDADEYVDLVCGPMLDAV-APHARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGNQLGPG-PG 235 (382)
T ss_pred ccccCCcccCCCHHHHHHHHHHHHHHHH-HHhCCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeCcccCC-hH
Confidence 11110111 11 1122222 2333 3457778887653 24678999999999999999999999642110 11
Q ss_pred HHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcc
Q 009282 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (538)
Q Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~ 324 (538)
++.+.+.|.. .+.|+...++ +.++++++.|+.++.+|...
T Consensus 236 v~~~~~~g~~--------------------------------~i~H~~~l~~-~~~~~la~~gv~~~~~P~~~------- 275 (382)
T PRK14085 236 VRLAVELGAA--------------------------------SVDHCTYLTD-ADVDALAGSGTVATLLPGAE------- 275 (382)
T ss_pred HHHHHHcCCC--------------------------------cHHHhCCCCH-HHHHHHHHcCCEEEECcHHH-------
Confidence 2222222221 3667777776 88999999998777665531
Q ss_pred cccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh
Q 009282 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM 404 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 404 (538)
+..... ..+++.++++|+++++|||+.+..+. ...+.......
T Consensus 276 ------~~~~~~------------~~~~~~l~~aGv~v~lgsD~~~~~~~-------------------~~~~~~~~~~~ 318 (382)
T PRK14085 276 ------FSTRQP------------YPDARRLLDAGVTVALASDCNPGSSY-------------------TSSMPFCVALA 318 (382)
T ss_pred ------HhcCCC------------CchHHHHHHCCCcEEEEeCCCCCCCh-------------------HHHHHHHHHHH
Confidence 111111 13489999999999999997533211 11122222233
Q ss_pred hhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCc
Q 009282 405 VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 452 (538)
Q Consensus 405 ~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~ 452 (538)
+...+++++++|+++|.|||+++|++ +.|+|++||.||||++|.+..
T Consensus 319 ~~~~~l~~~~al~~aT~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~ 365 (382)
T PRK14085 319 VRQMGMTPAEAVWAATAGGARALRRD-DVGVLAVGARADLHVLDAPSH 365 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHcCCC-CCCCcCCCCCCCEEEEcCCCC
Confidence 44567999999999999999999996 589999999999999997653
No 71
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.3e-32 Score=271.80 Aligned_cols=333 Identities=20% Similarity=0.284 Sum_probs=239.9
Q ss_pred cCcccEEEECcEEEcCCC--ceeeeEEEeCCEEEEe-cCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhh
Q 009282 50 QSSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAV-QPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDD 126 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~V-g~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~ 126 (538)
+...+++++|+++++.-. +..++|+|.+|||+.| ++.. .++.++||+.|+||.|||||.|.|+..+ ..+|..
T Consensus 21 ~~~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~--~e~~~~iDa~g~yivPGfID~H~HIESS---m~tP~~ 95 (584)
T COG1001 21 RAKADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR--AEATEVIDAAGRYIVPGFIDAHLHIESS---MLTPSE 95 (584)
T ss_pred CCCCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC--cccceeecCCCCEeccceeecceecccc---ccCHHH
Confidence 337899999999999654 4689999999999995 4433 4578999999999999999999999886 567777
Q ss_pred HHHHHHHHHhCCcEEEe-cccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-ec---CC--h--hhHHHHHHHHHHcCC
Q 009282 127 FFSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TK---WD--E--VVSDEMEVMVKEKGI 197 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~--~--~~~~~~~~~~~~~g~ 197 (538)
+ ++..+.+|+||++ |.+...+....+.++...+.....++++.++.+. .+ .+ + =..+.++++.++..+
T Consensus 96 F---A~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~p~V 172 (584)
T COG1001 96 F---ARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYVMLPSCVPATPFETSGAELTAEDIKELLEHPEV 172 (584)
T ss_pred H---HHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEEecccCccCCccccCCceecHHHHHHHhhCCCc
Confidence 7 7888999999987 5555555567788888888877777777665431 11 11 1 135677777777888
Q ss_pred cEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHH
Q 009282 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (538)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~ 277 (538)
-++..++++++.-. .++.+...+++++++|+++..|++.... ..+..+...|+.
T Consensus 173 igl~E~Mn~pgVi~-~D~~~l~kl~a~~~~~k~VdGHapgl~g--~~Ln~Y~aaGi~----------------------- 226 (584)
T COG1001 173 IGLGEMMNFPGVIE-GDPDMLAKLEAARKAGKPVDGHAPGLSG--KELNAYIAAGIS----------------------- 226 (584)
T ss_pred cchhhhcCCchhcc-CCHHHHHHHHHHHHcCCeecccCCCCCh--HHHHHHHhcCCC-----------------------
Confidence 88888888887665 4556677788999999999999987653 334444555553
Q ss_pred HHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHH-HHHH
Q 009282 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKAL-QAAL 356 (538)
Q Consensus 278 ~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l-~~~l 356 (538)
..|.+...+ +.+++++ .|..+...-. +..+ +...+ ...-
T Consensus 227 ----------tDHE~~t~E-Ea~~klr-~Gm~i~iReG-------------------S~a~---------dl~~l~~~i~ 266 (584)
T COG1001 227 ----------TDHESTTAE-EALEKLR-LGMKIMIREG-------------------SAAK---------DLAALLPAIT 266 (584)
T ss_pred ----------cCcccCCHH-HHHHHHh-CCcEEEEEcC-------------------chhh---------hHHHHHHHHh
Confidence 334443332 5555554 6766643321 1111 11222 2333
Q ss_pred hcC-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcc
Q 009282 357 ATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGA 435 (538)
Q Consensus 357 ~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~Gs 435 (538)
+.| -.++++||....++-.. +-.+...++.+++.| +++.+|++|||+|||+.+|+++ +|.
T Consensus 267 e~~~~~~~lcTDD~~p~dl~~-----------------eGhld~~vR~Ai~~G-v~p~~a~qmAtiN~A~~~gl~~-~G~ 327 (584)
T COG1001 267 ELGSRRVMLCTDDRHPDDLLE-----------------EGHLDRLVRRAIEEG-VDPLDAYQMATINPAEHYGLDD-LGL 327 (584)
T ss_pred hcCCceEEEECCCCChhHhhh-----------------cCCHHHHHHHHHHcC-CCHHHHHHHHhcCHHHHcCCcc-ccc
Confidence 335 46899999764432111 335677777777776 9999999999999999999954 999
Q ss_pred cccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 436 ILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 436 I~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
|+||..||||+++ |.. .-+|..|+++|++|.++|+-+..+
T Consensus 328 iAPG~~ADlvi~~-DL~----------------------~~~v~~V~~~G~~v~~~g~~l~~~ 367 (584)
T COG1001 328 IAPGRRADLVILE-DLR----------------------NFKVTSVLIKGRVVAEDGKALIKD 367 (584)
T ss_pred ccCCccccEEEEc-ccc----------------------cCceeEEEECCEEEecCCceeccc
Confidence 9999999999997 321 237999999999999999855543
No 72
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=100.00 E-value=3.1e-31 Score=270.03 Aligned_cols=357 Identities=18% Similarity=0.213 Sum_probs=214.6
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCC---CCceEEecCCCeeeccccccccccccccCC-CCChhhHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFS 129 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~-~~~~~~~~~ 129 (538)
.++|+|++|++++...+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+...... .........
T Consensus 2 ~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~~ 81 (388)
T PRK10657 2 FTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPEV 81 (388)
T ss_pred eEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHHH
Confidence 4789999999987666789999999999998754321 346899999999999999999998742100 011123335
Q ss_pred HHHHHHhCCcEEEecccCCCCC-CHHHHHHHH----HHHhcccceeeeeee-eeecCChhhHHHHHHHHHHcCCcEE-EE
Q 009282 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAY----EKKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSF-KF 202 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~i-k~ 202 (538)
.+..++++||||++|+...... ...+.+... .+.+-+.+...+++. ......+...+++ ... ....++ ++
T Consensus 82 ~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~g~g~~ 158 (388)
T PRK10657 82 QLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSYHVPVRTITGSIRKDI-VLI--DKVIGVGEI 158 (388)
T ss_pred HHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCCCCCchhhhcchhhce-ehh--hhhhCccee
Confidence 6788899999999998733221 112222222 222222221111111 0000111111111 111 111122 34
Q ss_pred EeeeCCCccCCHHHHHHHHHHHHhcCC------eEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 203 FMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
...++.....+.+.+.++.+.++..+. ++++|+.. ....+...+.+.+.|+..
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~-------------------- 218 (388)
T PRK10657 159 AISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPI-------------------- 218 (388)
T ss_pred eeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCc--------------------
Confidence 334444455688888888887775544 89999863 333222222333444432
Q ss_pred HHHHHHcCCCEEEEeccCH-HHHHHHHHHHHcCCcEEEe-ccccccccCcccccCCCcccccceeecCCCCCc---ccHH
Q 009282 276 IRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGQRVIGE-PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS---GHNK 350 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~-~~~~~i~~~~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~---~~~~ 350 (538)
..+...|+... ...+....+.++|..+... .++ +.+.. ...+
T Consensus 219 --------~~~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~~~~-------------------------~~~~~~~~~~~~ 265 (388)
T PRK10657 219 --------SQFLPTHVNRNEPLFEQALEFAKKGGVIDLTTSDP-------------------------DFLGEGEVAPAE 265 (388)
T ss_pred --------ceeeCcccCCCHHHHHHHHHHHHcCCeEEEecCCC-------------------------cccccCccCHHH
Confidence 12445665541 1113334455566655332 221 11111 2246
Q ss_pred HHHHHHhcCC---ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHc
Q 009282 351 ALQAALATGI---LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 427 (538)
Q Consensus 351 ~l~~~l~~Gv---~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~l 427 (538)
.++.+++.|+ +++++||+...++..... . ...+.|..+....+.. +...+...++|++++++++|.|||+++
T Consensus 266 ~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~---g-~~~~~g~~~~~~l~~~-~~~~~~~~gis~~~~l~~aT~npA~~l 340 (388)
T PRK10657 266 ALKRALEAGVPLSRVTLSSDGNGSLPKFDED---G-NLVGLGVGSVESLLEE-VRELVKDEGLPLEDALKPLTSNVARFL 340 (388)
T ss_pred HHHHHHHcCCChhheEEECCCCCCCceeccC---C-CEeccCcCchhhHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 6899999998 789999975432211000 0 0134555554433333 335555567999999999999999999
Q ss_pred CCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 428 NVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 428 g~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
|+++ +|+|++|+.|||+++| +. .++..|+++|++|+++++++..
T Consensus 341 g~~~-~G~l~~G~~AD~vv~~-~~------------------------~~~~~~~~~G~~v~~~~~~~~~ 384 (388)
T PRK10657 341 KLNG-KGEILPGKDADLLVLD-DD------------------------LRIEQVIAKGKLMVKDGKALVK 384 (388)
T ss_pred CCCC-CCccCCCCccCEEEEC-CC------------------------CCEEEEEECCEEEEECCEEecc
Confidence 9965 8999999999999999 32 2689999999999999998774
No 73
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=6.7e-32 Score=276.81 Aligned_cols=359 Identities=18% Similarity=0.221 Sum_probs=212.8
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-CC----------
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------- 121 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~---------- 121 (538)
++++|+|++|+++. ...+|+|+||+|++|++..+. ...++||++|++|+|||||+|+|+...+. +.
T Consensus 2 ~~~~i~~~~i~~~~--~~~~i~i~~g~I~~v~~~~~~-~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~g~l~ 78 (426)
T PRK07572 2 FDLIVRNANLPDGR--TGIDIGIAGGRIAAVEPGLQA-EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASGTLL 78 (426)
T ss_pred CcEEEECeEECCCC--eeEEEEEECCEEEEecCCCCC-CcCceEeCCCCEEcccceehhhCcchhhccCCCCCCCCCCHH
Confidence 35789999999865 367899999999999986432 34689999999999999999999975421 10
Q ss_pred ------------CChhhHH----HHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccceee-eeeeeeecCC
Q 009282 122 ------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDY-GFHMAITKWD 181 (538)
Q Consensus 122 ------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 181 (538)
.+++++. ..++.++++|||+++++...... ......+.....++...+.. .+........
T Consensus 79 e~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~g~~~~ 158 (426)
T PRK07572 79 EGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLVAFPQDGVLRS 158 (426)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEEeccChhhccC
Confidence 2334433 23455689999999997432211 12222221111111111111 1111011111
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCccccc
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
.+....+++.. +.|++.+............+.+.++.+++.|+++|+++.+|+ +........++.+
T Consensus 159 ~~~~~~~~~~l-~~g~d~iGg~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~------------ 225 (426)
T PRK07572 159 PGAVDNLERAL-DMGVDVVGGIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIETL------------ 225 (426)
T ss_pred ccHHHHHHHHH-HcCCCEEeCCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhHHHHHHH------------
Confidence 23345566666 567777642211111111224899999999999999999999 4444333222111
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH------HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~------~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (538)
.....+ ....+ ++.+.|+.+.. ..+.++.+++.|+.+++||............
T Consensus 226 -----------~~~~~~-~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~-------- 284 (426)
T PRK07572 226 -----------AAETQR-LGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDT-------- 284 (426)
T ss_pred -----------HHHHHH-hCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCC--------
Confidence 001111 11223 67889996533 2367899999999999998642111100000
Q ss_pred cceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCC-cchhhhHHHHHHHhhhcCCCC--
Q 009282 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGV-NGIEERMHLVWDTMVESGQIS-- 411 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~-~g~~~~~~~~~~~~~~~~~ls-- 411 (538)
.|. .....++..++++|+++++|||.... +| .++|. ..++.. . .....++++
T Consensus 285 -----~~~---~~g~~~v~~l~~~GV~v~lGtD~~~~----------~~--~~~~~~~~~e~~-~----~~~~~~~~~~~ 339 (426)
T PRK07572 285 -----YPK---RRGMTRVPELMAAGINVAFGHDCVMD----------PW--YSLGSGDMLEVA-H----MGLHVAQMTGQ 339 (426)
T ss_pred -----CCC---CCCCcCHHHHHHCCCcEEEecCCCCC----------CC--CCCCCCCHHHHH-H----HHHHHHcCCCH
Confidence 000 01123488999999999999996411 11 11111 111111 1 111122233
Q ss_pred --HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcC-CCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEE
Q 009282 412 --VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP-NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 488 (538)
Q Consensus 412 --~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V 488 (538)
+.++|+++|.|||++||+++ .| |++||.||||++|. ++...+. ...++..||++|++|
T Consensus 340 ~~l~~~l~~aT~~~A~~lgl~~-~g-i~~G~~ADlvl~d~~~p~e~i~-----------------~~~~~~~V~~~G~~v 400 (426)
T PRK07572 340 DAMRACFDAVTVNPARIMGLEG-YG-LEPGCNADLVLLQARDPIEAIR-----------------LRAARLAVIRRGKVI 400 (426)
T ss_pred HHHHHHHHHhhcchHHhhCCCC-cC-CCCCCcCCEEEEeCCCHHHHHH-----------------hcCCceEEEECCEEE
Confidence 35667799999999999965 67 99999999999994 5443321 135789999999999
Q ss_pred EECC
Q 009282 489 WEND 492 (538)
Q Consensus 489 ~~~~ 492 (538)
++..
T Consensus 401 ~~~~ 404 (426)
T PRK07572 401 ARTP 404 (426)
T ss_pred eccC
Confidence 8873
No 74
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=100.00 E-value=4.8e-32 Score=275.93 Aligned_cols=348 Identities=17% Similarity=0.164 Sum_probs=211.5
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC----------CCCceEEecCCCeeeccccccccccccccCCC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~----------~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~ 121 (538)
.++++|+|++|+|..+...++|+|+||||++|++.... ..++++||++|++|+|||||+|+|+..+ +
T Consensus 65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P--~- 141 (567)
T TIGR01792 65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISP--Q- 141 (567)
T ss_pred cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCc--c-
Confidence 56899999999997666789999999999999874321 1357899999999999999999998544 1
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCC-----CC---CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (538)
..+.++..||||+++++... .. ...-......+......+++++.... ..+...++.++.
T Consensus 142 --------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~~~~in~g~~g~g---~~~~~~~L~e~i- 209 (567)
T TIGR01792 142 --------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAADGLPINFGFTGKG---SGSGPAALIEQI- 209 (567)
T ss_pred --------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhccCCccEEEEeCC---ccchHHHHHHHH-
Confidence 15788999999999864311 00 11111122223333455666665322 122345566666
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh---HHHHHHHHHHcCCCCcccccccCCchHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA---VFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (538)
+.|+.++|.+.. +..+++.+.++++.|+++|.++++|+++..+ ++..++ +.|.
T Consensus 210 ~aGa~gfK~h~~----y~~s~e~L~~al~~A~e~gv~V~iH~ET~~E~g~ve~t~~---a~g~----------------- 265 (567)
T TIGR01792 210 EAGACGLKVHED----WGATPAAIDNALSVADEYDVQVAVHTDTLNESGFVEDTIA---AFKG----------------- 265 (567)
T ss_pred HcCCcEEEeCCC----CCCCHHHHHHHHHHHHHcCCEEEEeCCCcccchHHHHHHH---HHCC-----------------
Confidence 578888886543 4578999999999999999999999977665 333322 2222
Q ss_pred HHHHHHHHHHHcCCCEEEEecc---CHHHHHHHHHHHHcCC-cEEEeccccc---------------cccCcccccCCCc
Q 009282 271 ATTRAIRLAEFVNTPLYVVHVM---SMDAMEEIAKARKAGQ-RVIGEPVVSG---------------LVLDDSWLWHSDF 331 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h~~---~~~~~~~i~~~~~~g~-~v~~~~~~~~---------------~~~~~~~~~~~~~ 331 (538)
.+++..|.. .....+.++.....++ +-+.+|+..+ .++++..-++..|
T Consensus 266 -------------rpIh~~H~~G~g~ghapdi~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~~~~h~l~~~~~~d~~~ 332 (567)
T TIGR01792 266 -------------RTIHTYHTEGAGGGHAPDIIVVVGYNNILPSSTNPTLPYTVNTIDEHLDMLMVCHHLNPKIPEDVAF 332 (567)
T ss_pred -------------CcchhHhhcCCCCCcHHHHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEEeccCCCCCcccchh
Confidence 222333322 2222133332222221 1111111111 0122222221122
Q ss_pred ccccceeecCCCCCcccHHHHH-HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCC
Q 009282 332 VTAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQI 410 (538)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~l~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~l 410 (538)
.. .|.+.+..+.. -+.+.|+...++||+.+...-.. ... ++-....++....|.
T Consensus 333 a~---------~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~-----~~~-----------r~~q~a~k~~~~~g~ 387 (567)
T TIGR01792 333 AE---------SRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGE-----VVT-----------RCWQTADKMKKQRGP 387 (567)
T ss_pred hh---------hhccceeccccchhhhCCcEEEecCCchhhCcccc-----eee-----------chHHHHHHHHHhcCC
Confidence 11 11112222222 36677999999999864422211 011 111111122221111
Q ss_pred C--------HHHH---HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEE
Q 009282 411 S--------VTDY---VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVE 479 (538)
Q Consensus 411 s--------~~ea---l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 479 (538)
- .+.+ |++.|.|||+++|+++.+|+|++||.||||||+++.+ ..++.
T Consensus 388 ~~~~~~~~~~~rl~r~L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f----------------------~~~p~ 445 (567)
T TIGR01792 388 LPGDSPGNDNNRVKRYVAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFF----------------------GVKPD 445 (567)
T ss_pred CcccccCChhhhHHHHHHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCccc----------------------CCChh
Confidence 1 1111 9999999999999999999999999999999998754 23577
Q ss_pred EEEECCEEEEEC-CeeeccC
Q 009282 480 VTIAGGRVVWEN-DELNVVP 498 (538)
Q Consensus 480 ~V~v~G~~V~~~-~~~~~~~ 498 (538)
.||++|+++|.. |++....
T Consensus 446 ~v~~~G~i~~~~~Gd~~as~ 465 (567)
T TIGR01792 446 MVLKGGLIAWAIMGDPNASI 465 (567)
T ss_pred eEEECCEEEEEeCCCccccC
Confidence 999999999987 7776654
No 75
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=2.3e-31 Score=270.55 Aligned_cols=349 Identities=16% Similarity=0.141 Sum_probs=210.2
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCC----------
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE---------- 122 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~---------- 122 (538)
.+++|+|++|+++. ..+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+........
T Consensus 2 ~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~~~~~ 78 (391)
T PRK05985 2 TDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEPGPSL 78 (391)
T ss_pred CCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecceEeeEEccCccccCCccccCCCCCCH
Confidence 46899999999975 56999999999999987554445789999999999999999999965311110
Q ss_pred -------------ChhhH----HHHHHHHHhCCcEEEecccCCCCC----CHHHHHHHHHHHhcccceeeeeeeeeec-C
Q 009282 123 -------------TIDDF----FSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMAITK-W 180 (538)
Q Consensus 123 -------------~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 180 (538)
+.+++ ...+..++++|+|+++++...... ......+...........++........ .
T Consensus 79 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~~ 158 (391)
T PRK05985 79 RERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQSGVLS 158 (391)
T ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcccEEEEeccCccccC
Confidence 00011 122456789999999987643221 1222222221111122222211111111 1
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
.....+.+++.. +.|.+.+.. ..++.....+.+.+.++++.|+++|+++.+|+.......
T Consensus 159 ~~~~~~ll~~~l-~~g~~~~gg-~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~------------------ 218 (391)
T PRK05985 159 RPGTAELLDAAL-RAGADVVGG-LDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELG------------------ 218 (391)
T ss_pred CcCHHHHHHHHH-HcCCCEEeC-CCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCcc------------------
Confidence 111223344444 456553322 233334455679999999999999999999984432100
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCC--CEEEEeccCHH------HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcc
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNT--PLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~--~~~~~h~~~~~------~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (538)
...+.++++.....+. ++.+.|+.... ..+.++++++.|+.|+.++..
T Consensus 219 --------~~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~---------------- 274 (391)
T PRK05985 219 --------AFQLERIAARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPG---------------- 274 (391)
T ss_pred --------HHHHHHHHHHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCC----------------
Confidence 0112223333333443 47888886532 125678899999988765221
Q ss_pred cccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhh-hHHHHHHHhhhcCCCC
Q 009282 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE-RMHLVWDTMVESGQIS 411 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~-~~~~~~~~~~~~~~ls 411 (538)
+.++ .+++.+++.|+++++|||+...+.. |+. ....++. .+...... .. ..-+
T Consensus 275 -~~~~------------~~~~~l~~~Gv~v~lGtD~~~~~~~-------p~~----~~~~~~~~~~~~~~~~-~~-~~~~ 328 (391)
T PRK05985 275 -SVPV------------PPVAALRAAGVTVFGGNDGIRDTWW-------PYG----NGDMLERAMLIGYRSG-FR-TDDE 328 (391)
T ss_pred -CCCC------------CCHHHHHHCCCeEEEecCCCCCCCc-------CCC----CCcHHHHHHHHHHHHc-cC-ChHH
Confidence 0111 2389999999999999996432111 111 0111111 11111111 11 1124
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 412 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 412 ~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
+.++|+++|.|||+++|+++ ++|++||.||||++|.+++.... .. ...+..||++|++||++
T Consensus 329 ~~~al~~~T~~~A~~lg~~~--~~l~~G~~ADlvvld~~~~~~~~------------~~----~~~~~~v~~~G~~v~~~ 390 (391)
T PRK05985 329 LAAALDCVTHGGARALGLED--YGLAVGARADFVLVDAETVAEAV------------VA----VPVRRLVVRGGRIVARD 390 (391)
T ss_pred HHHHHHHHcchhHHHhCCcc--cCCCCCCcCCEEEECCCCHHHHH------------hh----CCcceEEEECCEEEecC
Confidence 67999999999999999954 45999999999999988653321 11 23467799999999997
Q ss_pred C
Q 009282 492 D 492 (538)
Q Consensus 492 ~ 492 (538)
|
T Consensus 391 ~ 391 (391)
T PRK05985 391 G 391 (391)
T ss_pred C
Confidence 5
No 76
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=2.5e-31 Score=271.28 Aligned_cols=360 Identities=20% Similarity=0.224 Sum_probs=213.9
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC-CCCceEEecCCCeeeccccccccccccccCCC----------
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---------- 121 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~-~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~---------- 121 (538)
..++|+|++|+++.. ..+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...+...
T Consensus 4 ~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~~~l 81 (426)
T PRK09230 4 ALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEASLEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTL 81 (426)
T ss_pred ceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCCCCCCceEeCCCCEeccceeEEEEccccceecCCCccCCCCCH
Confidence 458999999987543 46999999999999986432 23568999999999999999999998652111
Q ss_pred -------------CChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc--ccceeeeeee--eee-c
Q 009282 122 -------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHM--AIT-K 179 (538)
Q Consensus 122 -------------~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~-~ 179 (538)
.++++++ ..+..++++|||+++++..+... ....++...+... ......++.. ... .
T Consensus 82 ~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~-~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~~~ 160 (426)
T PRK09230 82 FEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDP-TLTALKAMLEVKEEVAPWVDLQIVAFPQEGIL 160 (426)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCc-chhHHHHHHHHHHHhhCcceEEEEeccCcccc
Confidence 1222322 23445688999999988654222 1122222211111 1112222111 100 0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc--CCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGP 256 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~ 256 (538)
........+.... +.+.+.+.. .++.... .+.+.+..+++.|+++|+++++|+.+. .......
T Consensus 161 ~~~~~~~~l~~a~-~~~~~~vg~--~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~~~~~----------- 226 (426)
T PRK09230 161 SYPNGEALLEEAL-RLGADVVGA--IPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFV----------- 226 (426)
T ss_pred CCccHHHHHHHHH-HcCCCEEeC--CCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcchHHH-----------
Confidence 1112223333333 334443321 1111112 247889999999999999999999543 2111101
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH------HHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~------~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
..+.+.+.... .+.++.+.||.+.. ..+.++.+++.|+.|++||.+......
T Consensus 227 -------------~~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~-------- 284 (426)
T PRK09230 227 -------------ETVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQG-------- 284 (426)
T ss_pred -------------HHHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcC--------
Confidence 11112222222 45688999999883 347899999999999999986322110
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcC-C
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESG-Q 409 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~-~ 409 (538)
.....| . .....++++++++|+++++|||+.. ++|. +.|...+-..+.... ..... .
T Consensus 285 -----~~~~~p-~--~~g~~pi~~l~~aGv~V~lGTD~~~----------d~~~--~~~~~d~~~~~~~~~--~~~~~~~ 342 (426)
T PRK09230 285 -----RFDTYP-K--RRGITRVKEMLEAGINVCFGHDDVF----------DPWY--PLGTANMLQVLHMGL--HVCQLMG 342 (426)
T ss_pred -----CCCCCC-C--CCCCcCHHHHHHCCCeEEEecCCCC----------CCCc--CCCCCCHHHHHHHHH--HHHhhCC
Confidence 000000 0 0112338899999999999999642 1221 112111111111111 01111 1
Q ss_pred C-CHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEE
Q 009282 410 I-SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 488 (538)
Q Consensus 410 l-s~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V 488 (538)
. ++.++|+|+|.|||++||+++ .| |++||.||||++|.+.+..+. +. ...+..|+++|++|
T Consensus 343 ~~~~~~~l~maT~~gA~alg~~~-~g-le~G~~ADlv~~~~~~~~~~~------------~~----~~~~~~v~~~G~~v 404 (426)
T PRK09230 343 YGQINDGLNLITTHSARTLNLQD-YG-IEVGNPANLIILPAENGFDAV------------RR----QVPVRYSIRHGKVI 404 (426)
T ss_pred hhhHHHHHHHHhcchhHHhCCCC-cC-CCCCCcCCEEEEeCCCHHHHH------------hc----cCCceEEEECCEEE
Confidence 1 367999999999999999965 77 999999999999965442221 11 34689999999999
Q ss_pred EEC
Q 009282 489 WEN 491 (538)
Q Consensus 489 ~~~ 491 (538)
++.
T Consensus 405 ~~~ 407 (426)
T PRK09230 405 AET 407 (426)
T ss_pred ecc
Confidence 976
No 77
>PRK10027 cryptic adenine deaminase; Provisional
Probab=100.00 E-value=1.2e-30 Score=270.79 Aligned_cols=328 Identities=18% Similarity=0.173 Sum_probs=225.4
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+.+++|+|++|+++.. ...++|+|+||+|++|++......+.++||++|++|+|||||+|+|+..+ . .+++.+
T Consensus 29 ~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~~~~~vIDa~G~~v~PGlIDaHvHiess--~-~~p~~~-- 103 (588)
T PRK10027 29 VADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESS--M-MTPVTF-- 103 (588)
T ss_pred CCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCCCCCeEEECCCCEEEECeEeccccCCcc--c-CCHhHH--
Confidence 6789999999998643 35679999999999997653322346899999999999999999999876 2 356666
Q ss_pred HHHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhcccceeeeeeee----eec-CC--h--hhHHHHHHHHHHcCCcE
Q 009282 130 GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGFHMA----ITK-WD--E--VVSDEMEVMVKEKGINS 199 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~--~--~~~~~~~~~~~~~g~~~ 199 (538)
.+.++.+||||++++..... ....+.++...+.........++..+ ... ++ + -..++++++.++.++-+
T Consensus 104 -a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v~g 182 (588)
T PRK10027 104 -ETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTG 182 (588)
T ss_pred -HHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCcee
Confidence 45689999999998643322 24556666666665554454443321 111 11 1 14567788777788889
Q ss_pred EEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
+...++|++....+++.+.++... .++.+.+|+..... ..+..+...|+.+
T Consensus 183 lgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l~g--~~L~ay~aaGi~s------------------------ 233 (588)
T PRK10027 183 LAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGLGG--KELNAYIAAGIEN------------------------ 233 (588)
T ss_pred EEeccCccccccCCHHHHHHHHHh---CCCceECCCCCCCh--HHHHHHHHcCCCC------------------------
Confidence 999999998887788888888744 89999999986643 4455556667643
Q ss_pred HHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-
Q 009282 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT- 358 (538)
Q Consensus 280 ~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~- 358 (538)
.|.+...+ +.++++ +.|..+...-. +..+ +.+.+..++..
T Consensus 234 ---------DHE~~t~e-ea~ekl-r~Gm~v~iReg-------------------S~~~---------nl~~l~~~~~~~ 274 (588)
T PRK10027 234 ---------CHESYQLE-EGRRKL-QLGMSLMIREG-------------------SAAR---------NLNALAPLINEF 274 (588)
T ss_pred ---------CcccCCHH-HHHHHH-HCCCEEEEeCC-------------------cccc---------CHHHHHHHhhcc
Confidence 33333322 444444 46766643221 1111 11222222221
Q ss_pred -CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccc
Q 009282 359 -GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAIL 437 (538)
Q Consensus 359 -Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~ 437 (538)
--.++++||......-.+ +..+...++++++..|+++++|++|+|.|||+++|++ ++|+|+
T Consensus 275 ~~~~~~l~TDd~~~~~l~~-----------------~Ghi~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lgl~-d~G~Ia 336 (588)
T PRK10027 275 NSPQCMLCTDDRNPWEIAH-----------------EGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLN-HLGLLA 336 (588)
T ss_pred CCCeEEEEcCCCChHHHHh-----------------ccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCC-CCcccC
Confidence 136799999753321111 2245666777787677999999999999999999995 589999
Q ss_pred cCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 438 VGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 438 ~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
||+.|||+++|... ..++..||++|++|+++ +.+
T Consensus 337 pG~~ADlvvld~l~-----------------------~~~v~~v~~~G~~v~~~-~~~ 370 (588)
T PRK10027 337 PGKQADIVLLSDAR-----------------------KVTVQQVLVKGEPIDAQ-TLQ 370 (588)
T ss_pred CCCcCCEEEEccCC-----------------------CceEEEEEECCEEeecc-ccc
Confidence 99999999998421 13689999999999998 655
No 78
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=100.00 E-value=1.6e-30 Score=270.00 Aligned_cols=324 Identities=19% Similarity=0.238 Sum_probs=221.8
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 54 ~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++|+|++|+++.+ ...++|+|+||||++|++.. +.++||++|++|+|||||+|+|+..+ . .+++.+ .
T Consensus 1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~----~~~viDa~G~~v~PG~ID~H~Hi~~~--~-~~~~~~---~ 70 (552)
T TIGR01178 1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN----GVKVIDALGEYAVPGFIDAHIHIESS--M-LTPSEF---A 70 (552)
T ss_pred CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC----CCeEEECCCCEEEeCeEecccccCCC--C-CChhHH---H
Confidence 47899999998654 35789999999999998742 46899999999999999999999876 2 244444 4
Q ss_pred HHHHhCCcEEEecccCCC-CCCHHHHHHHHHHHhcccceeeeeeeee--e----cCChh--hHHHHHHHHHHcCCcEEEE
Q 009282 132 AAALAGGTTMHIDFVIPI-NGSLTAGFEAYEKKAKNSCMDYGFHMAI--T----KWDEV--VSDEMEVMVKEKGINSFKF 202 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~--~~~~~~~~~~~~g~~~ik~ 202 (538)
+.++.+||||++++.... .....+.++...+.....++++.+..+. + ..++. ..++++++.++.|+.++|.
T Consensus 71 ~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~glke 150 (552)
T TIGR01178 71 KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLGLAE 150 (552)
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccEEEE
Confidence 668999999999874332 2245677777666665666666444331 1 11222 3667888886679999999
Q ss_pred EeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHc
Q 009282 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 282 (538)
+++|++....+.+.++ .++.+++.|..+.+|++... ...+..+.+.|..
T Consensus 151 ~m~~~~v~~~d~~~l~-~i~~a~~~g~~I~gHap~l~--~~eL~~~~~aGi~---------------------------- 199 (552)
T TIGR01178 151 VMDYPGVINADIEMLN-KINSARKRNKVIDGHCPGLS--GKLLNKYISAGIS---------------------------- 199 (552)
T ss_pred EecchhhcCCCHHHHH-HHHHHHhCCCEEEecCCCCC--HHHHHHHHHcCCC----------------------------
Confidence 9998764444455554 44889999999999998543 2344444455543
Q ss_pred CCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHH--hcCC
Q 009282 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAAL--ATGI 360 (538)
Q Consensus 283 ~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l--~~Gv 360 (538)
..|+.... ++...-.+.|..+...-.+ .. .+...+..+. ..+.
T Consensus 200 -----~dHe~~s~--~ea~e~~~~Gm~~~ir~gs-------------------~~---------~n~~~~~~~~~~~~~~ 244 (552)
T TIGR01178 200 -----NDHESTSI--EEAREKLRLGMKLMIREGS-------------------AA---------KNLEALHPLINEKNCR 244 (552)
T ss_pred -----CCcCcCCH--HHHHHHHHCCCEEEEeCCc-------------------cc---------cCHHHHHHHHhhcCCc
Confidence 45654433 4444455678766432111 10 0111222222 3568
Q ss_pred ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCC
Q 009282 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 440 (538)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk 440 (538)
+++++||.... .. .+. +..+...+++++.. ++++++||+|+|.|||+++|++ ++|+|++|+
T Consensus 245 ~~~l~TD~~~~-~~-------~~~---------~g~l~~~v~~ai~~-g~~~~~Al~maT~npA~~lgl~-~~G~I~pG~ 305 (552)
T TIGR01178 245 SLMLCTDDRHV-ND-------ILN---------EGHINHIVRRAIEH-GVDPFDALQMASINPAEHFGID-VGGLIAPGD 305 (552)
T ss_pred eEEEEeCCCCh-hH-------HHh---------cCCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCC-CCcccCCCC
Confidence 99999994211 11 010 22455556566665 4999999999999999999995 589999999
Q ss_pred CccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC-----Ceee
Q 009282 441 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-----DELN 495 (538)
Q Consensus 441 ~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~-----~~~~ 495 (538)
.||||+++... ..++..||++|++|.++ |+.+
T Consensus 306 ~ADlvvl~~l~-----------------------~~~v~~v~~~G~~v~~~~~~~~g~~~ 342 (552)
T TIGR01178 306 PADFVILKDLR-----------------------NFKVNKTYVKGKLLDLNEVFNDEISR 342 (552)
T ss_pred cCCEEEECCCC-----------------------CceEEEEEECCEEEcccccccCCccc
Confidence 99999998311 23789999999999997 7755
No 79
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=100.00 E-value=3.1e-31 Score=263.92 Aligned_cols=356 Identities=21% Similarity=0.236 Sum_probs=240.3
Q ss_pred cccEEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccccc-CCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~-~~~~~~~~~~~ 129 (538)
.++++|+|++|++++.. .+++|+|+||||++|++..+.+++.++||++|++|+|||||+|+|..... ....+.+.+..
T Consensus 2 ~~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~~~~~viD~~G~~i~PGfID~HvHg~~g~~~~~~~~e~~~~ 81 (380)
T TIGR00221 2 AESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELEPEIKEIDLPGNVLTPGFIDIHIHGCGGVDTNDASFETLEI 81 (380)
T ss_pred CceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCCCCCeEEECCCCEEccceeeeeeccccCcCCCCCCHHHHHH
Confidence 34689999999998765 46899999999999987654444568999999999999999999986531 11235688889
Q ss_pred HHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh--cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA--KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..+.+++.|||+++++...... ...+.++.+.+.. ......+|+|...+..+.+ ..|+..-...
T Consensus 82 ~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~----------~~Gah~~~~i--- 148 (380)
T TIGR00221 82 MSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPE----------KKGAHPPEYI--- 148 (380)
T ss_pred HHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChh----------hcCCCCHHHh---
Confidence 9999999999999988654443 4556666555533 2356778888888776642 3344332111
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
...+.++++++++.+. ..+.+++=+++.....+.++.+.+.|+..+.+|+.+.. +++.++++. |..
T Consensus 149 ---~~p~~~~~~~~~~~~~-~~i~~vTlAPE~~~~~~~i~~l~~~gi~vs~GHs~A~~-----~~~~~a~~~----Ga~- 214 (380)
T TIGR00221 149 ---REPDVELFKKFLCEAG-GVITKVTLAPEEDQHFELIRHLKDAGIIVSAGHTNATY-----ELAKAAFKA----GAT- 214 (380)
T ss_pred ---hCcCHHHHHHHHHhcC-CCEEEEEECCCCCChHHHHHHHHHCCeEEEeeCCCCCH-----HHHHHHHHc----CCC-
Confidence 2247788888887653 34566666666555668888888889988888885533 444555443 333
Q ss_pred EEEeccCHHH------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-C
Q 009282 287 YVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G 359 (538)
Q Consensus 287 ~~~h~~~~~~------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-G 359 (538)
+++|+.+.-. .-.+...-.. -.+.++...+..++++.. ++.+.+. |
T Consensus 215 ~~THlfNaM~~~~hR~pg~vga~l~~-~~~~~elI~Dg~Hv~p~~--------------------------~~~~~r~kg 267 (380)
T TIGR00221 215 HATHLYNAMSPIHHREPGVIGAVLDH-DDVYTEIIADGIHIHPLN--------------------------IRLAKKLKG 267 (380)
T ss_pred eeeeeccCCCCcCCCCCcHHHHHhcC-CCcEEEEEcCCCcCCHHH--------------------------HHHHHHhcC
Confidence 4666655211 0111111111 134556665555554432 3333332 4
Q ss_pred C-ceEEeCCCCCCCh---hhhhcCc------cCcccCCCC-CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 360 I-LQLVGTDHCAFNS---TQKAFGI------DDFRKIPNG-VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 360 v-~~~lgtD~~~~~~---~~~~~~~------~~~~~~~~g-~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
. ++.+-||.....- ....++. +.......| ++|....+...++++++.++++++++++++|.|||+++|
T Consensus 268 ~~~~~lvtDa~~~~g~~~G~y~l~~~~v~~~~g~~~~~~g~LAGs~ltl~~~v~~l~~~~~~~~~eal~~aT~npA~~lg 347 (380)
T TIGR00221 268 DSKLCLVTDSMAAAGAKDGVFIFGGKTVYIREGTCLDSNGTLAGSSLTMIEGARNLVEFTNISLTDAARMSSLNPARALG 347 (380)
T ss_pred CCcEEEEeccccccCCCCceEeECCEEEEEECCEEEcCCCceechhhhHHHHHHHHHHhhCCCHHHHHHHHhHHHHHHhC
Confidence 3 6788888543221 1111111 112222334 778788888888888888889999999999999999999
Q ss_pred CCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCE
Q 009282 429 VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 486 (538)
Q Consensus 429 ~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~ 486 (538)
+++++|+|++|+.|||+|+|.+ .+|+.||++|+
T Consensus 348 l~~~~G~i~~G~~ADlvv~d~~-------------------------~~v~~t~~~G~ 380 (380)
T TIGR00221 348 IDDRLGSVTVGKDANLVVFTPD-------------------------FEVILTIVNGN 380 (380)
T ss_pred CCCCCcccCCCCcCCEEEECCC-------------------------CCEEEEEeCCC
Confidence 9766899999999999999965 36899999984
No 80
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1.5e-31 Score=268.95 Aligned_cols=343 Identities=15% Similarity=0.080 Sum_probs=210.1
Q ss_pred CEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-CC-------------------CChhhHHH----H
Q 009282 78 GIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------------------ETIDDFFS----G 130 (538)
Q Consensus 78 grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~-------------------~~~~~~~~----~ 130 (538)
|+|++||+.... .++.++||+.|++|+|||||+|+|+++... +. .++++.+. +
T Consensus 1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~ 80 (381)
T cd01312 1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG 80 (381)
T ss_pred CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 699999985322 235789999999999999999999977622 10 12222221 2
Q ss_pred HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHHH--HcCCcEEEEEeeeC
Q 009282 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVK--EKGINSFKFFMAYK 207 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~g~~~ik~~~~~~ 207 (538)
...++++||||+.|+... ....++..+.+.+..+.+.+...... ......+......+ ....+.++..+.++
T Consensus 81 ~~E~l~~G~Tt~~d~~~~-----~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 155 (381)
T cd01312 81 IRQMLESGTTSIGAISSD-----GSLLPALASSGLRGVFFNEVIGSNPSAIDFKGETFLERFKRSKSFESQLFIPAISPH 155 (381)
T ss_pred HHHHHHhCCeEEEEecCC-----HHHHHHHHHcCCcEEEEEeeECCCCchhhhhHHHHHHHHHHhhccCccceEEEECCC
Confidence 344588999999998643 12455555566555444433211111 11111111112211 11234577777888
Q ss_pred CCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHH-------HHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 208 GSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKR-------MIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 208 ~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
....++.+.++++.+.|+++|+++++|+. +..+.....+. +...+...... ...+ .+ +.+...
T Consensus 156 a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~-~g~~-------pv-~~l~~~ 226 (381)
T cd01312 156 APYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPK-KLAT-------AI-DFLDML 226 (381)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhccccccc-CCCC-------HH-HHHHHc
Confidence 88888999999999999999999999994 44443322211 00110000000 0001 11 122333
Q ss_pred HHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC
Q 009282 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (538)
Q Consensus 280 ~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G 359 (538)
..++.++.+.|+...++ ++++++++.|+.+++||.. ++..+.+. .++..+++.|
T Consensus 227 g~L~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~~P~s-------------n~~lg~g~------------~p~~~~~~~G 280 (381)
T cd01312 227 GGLGTRVSFVHCVYANL-EEAEILASRGASIALCPRS-------------NRLLNGGK------------LDVSELKKAG 280 (381)
T ss_pred CCCCCCcEEEECCcCCH-HHHHHHHHcCCeEEECcch-------------hhhhcCCC------------cCHHHHHHCC
Confidence 45677899999999887 8899999999999999875 22222221 2288999999
Q ss_pred CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccC
Q 009282 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVG 439 (538)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~G 439 (538)
+++++|||+...+....+ +. ++.......+.. ...+++.++|+|+|.|+|+++|++ .|+|++|
T Consensus 281 v~v~lGtD~~~~~~~~d~-----~~---------~~~~~~~~~~~~-~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~G 343 (381)
T cd01312 281 IPVSLGTDGLSSNISLSL-----LD---------ELRALLDLHPEE-DLLELASELLLMATLGGARALGLN--NGEIEAG 343 (381)
T ss_pred CcEEEeCCCCccCCCCCH-----HH---------HHHHHHHhcccc-cccCCHHHHHHHHHHHHHHHhCCC--CCccCCC
Confidence 999999997543322111 11 122211111111 112688999999999999999994 8999999
Q ss_pred CCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCE
Q 009282 440 SDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGR 486 (538)
Q Consensus 440 k~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~ 486 (538)
|+||||++|.+.+. .+. .+.. ...+. ...|..|||+|+
T Consensus 344 k~ADlvv~d~~~~~-~~~---~~~~-~~~~~----~~~v~~v~v~G~ 381 (381)
T cd01312 344 KRADFAVFELPGPG-IKE---QAPL-QFILH----AKEVRHLFISGK 381 (381)
T ss_pred CcccEEEEeCCCcC-CCC---ccHH-HHHHc----cCCCCEEEecCC
Confidence 99999999987651 111 1111 11122 358999999996
No 81
>PRK09237 dihydroorotase; Provisional
Probab=100.00 E-value=2.8e-30 Score=261.57 Aligned_cols=351 Identities=21% Similarity=0.223 Sum_probs=212.7
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 55 ~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
++|+|++|+++.. ....+|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+... +... +. ...+
T Consensus 1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~iD~~g~~v~PG~iD~H~H~~~~--~~~~-~~--~~~~ 75 (380)
T PRK09237 1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGSQAKKVIDLSGLYVSPGWIDLHVHVYPG--STPY-GD--EPDE 75 (380)
T ss_pred CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEEeeecCCCC--CCcc-CC--CHHH
Confidence 3799999998764 35689999999999998865444467899999999999999999999854 2111 11 3357
Q ss_pred HHHhCCcEEEecccCCCCCCHHHHHHHHHHH-hc--ccceeeeeeeeeec--C-C--hhhHHHHHHHHHH--cCCcEEEE
Q 009282 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AK--NSCMDYGFHMAITK--W-D--EVVSDEMEVMVKE--KGINSFKF 202 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~--~g~~~ik~ 202 (538)
.++++||||++++............+...+. +. ..+.++.+...... . + .-..++++++..+ .+..++|.
T Consensus 76 ~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~glk~ 155 (380)
T PRK09237 76 VGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIVGIKA 155 (380)
T ss_pred HHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEEEEEE
Confidence 7899999999998654433333333332322 11 12333333322111 1 1 1134556666542 46888898
Q ss_pred EeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHH
Q 009282 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 281 (538)
++.+........+.++.....+.+.|+++.+|+++... ..+.... ..
T Consensus 156 ~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~~~-------------------------------l~- 203 (380)
T PRK09237 156 RMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEILEL-------------------------------LR- 203 (380)
T ss_pred EEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHHhh-------------------------------cc-
Confidence 87764222211233444444556899999999965421 1111111 11
Q ss_pred cCCCEEEEeccCHHH----------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHH
Q 009282 282 VNTPLYVVHVMSMDA----------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (538)
Q Consensus 282 ~~~~~~~~h~~~~~~----------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (538)
.+ ..+.||..... .+.+....++|+.+...... ..+ ....
T Consensus 204 ~g--~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~------------------~~~----------~~~~ 253 (380)
T PRK09237 204 PG--DILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGT------------------ASF----------SFKV 253 (380)
T ss_pred CC--CEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCC------------------Ccc----------cHHH
Confidence 01 13566654331 13555566677655422110 000 1133
Q ss_pred HHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 352 LQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 352 l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
...++++|+ +.+++||..+.+.. .+....+...++.+.. .+++++++++++|.|||+++|+
T Consensus 254 ~~~l~~~g~~~~~l~tD~~~~~~~----------------~~~~~~l~~~~~~~~~-~g~~~~~al~~aT~n~A~~lgl- 315 (380)
T PRK09237 254 AEAAIAAGILPDTISTDIYCRNRI----------------NGPVYSLATVMSKFLA-LGMPLEEVIAAVTKNAADALRL- 315 (380)
T ss_pred HHHHHHCCCCceEEECCCCCCCcc----------------cchHhHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHcCC-
Confidence 456778886 56999996543210 0001123344444444 4599999999999999999999
Q ss_pred CCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeec
Q 009282 431 PRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 431 ~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~ 496 (538)
+++|+|++||.|||++++.+... .+ ..+......+.+. ...|+.||++|++||.+-..++
T Consensus 316 ~~~G~l~~G~~ADlvv~~~~~~~-~~---~~d~~~~~~~~~~--~~~~~~~~v~G~~~~~~~~~~~ 375 (380)
T PRK09237 316 PELGRLQVGSDADLTLFTLKDGP-FT---LTDSEGDSLIGER--LLTPLATVRGGKVVLTEQGSAE 375 (380)
T ss_pred CCCCcCCCCCcCCEEEEeCCCCC-cc---ccCCCCCEEEecC--CCcceEEEECCEEEEccCcccc
Confidence 67899999999999999965442 11 1222222333322 3589999999999998754443
No 82
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=100.00 E-value=9.8e-31 Score=264.97 Aligned_cols=318 Identities=22% Similarity=0.236 Sum_probs=199.4
Q ss_pred EEEeCCEEEEecCCCCCC----CCceEEecCCCeeeccccccccccccccC----------CC-----------------
Q 009282 73 VYVEDGIVVAVQPNINVG----DDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS----------------- 121 (538)
Q Consensus 73 V~I~~grI~~Vg~~~~~~----~~~~vID~~G~~v~PGlID~H~H~~~~~~----------~~----------------- 121 (538)
|+|+||||++||+....+ .+.++||++|++|+|||||+|+|+..... +.
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80 (371)
T ss_pred CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence 689999999999854432 35789999999999999999999976411 10
Q ss_pred ----CChhhHHH----HHHHHHhCCcEEEecccCCC-C-CCHHHHHHHHHHHhcccceee--eee--eeeec-C--Chhh
Q 009282 122 ----ETIDDFFS----GQAAALAGGTTMHIDFVIPI-N-GSLTAGFEAYEKKAKNSCMDY--GFH--MAITK-W--DEVV 184 (538)
Q Consensus 122 ----~~~~~~~~----~~~~~l~~GvTt~~d~~~~~-~-~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~-~--~~~~ 184 (538)
.++++++. .+..++++|||++.+..... + ....+.++...+...+..+.+ .+. ...+. . +.+.
T Consensus 81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~~ 160 (371)
T cd01296 81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160 (371)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHHH
Confidence 12233322 34556889999998842111 1 122334444444443222222 111 01111 0 1111
Q ss_pred H----HHHHH-HHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 185 S----DEMEV-MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 185 ~----~~~~~-~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
. +++.. ...+.+...++.+.. ....+.+.++++++.|+++|+++.+|+.+..... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~-~~~~------------ 224 (371)
T cd01296 161 IDLVIEEVLPAVAEENLADFCDVFCE---KGAFSLEQSRRILEAAKEAGLPVKIHADELSNIG-GAEL------------ 224 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeec---CCccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC-HHHH------------
Confidence 1 11111 111345677776532 2335688999999999999999999996532110 0111
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
+...+. ..+.|+...+. +.++++++.|+.+..+|..... .+..
T Consensus 225 -------------------~~~~g~-~~i~H~~~~~~-~~i~~la~~g~~v~~~P~~~~~-------------l~~~--- 267 (371)
T cd01296 225 -------------------AAELGA-LSADHLEHTSD-EGIAALAEAGTVAVLLPGTAFS-------------LRET--- 267 (371)
T ss_pred -------------------HHHcCC-CeeHHhcCCCH-HHHHHHHHcCCeEEEChHHHHH-------------hCCC---
Confidence 111222 23677776665 8899999999999888775321 1111
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHH
Q 009282 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~a 419 (538)
.+| +++++++|+++++|||+.|.... ...+...+..++...+++++++++++
T Consensus 268 ~~~---------~~~l~~~Gv~v~lgsD~~p~~~~-------------------~~~l~~~~~~~~~~~~l~~~~al~~a 319 (371)
T cd01296 268 YPP---------ARKLIDAGVPVALGTDFNPGSSP-------------------TSSMPLVMHLACRLMRMTPEEALTAA 319 (371)
T ss_pred CCC---------HHHHHHCCCcEEEecCCCCCCCh-------------------HHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 122 78999999999999997433211 11122233334445679999999999
Q ss_pred hHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 420 STECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 420 T~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
|.|||+++|+++++|+|++||.|||||+|.+++..+ ++... ..+|..||++|
T Consensus 320 T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~------------~~~~~--~~~v~~v~~~G 371 (371)
T cd01296 320 TINAAAALGLGETVGSLEVGKQADLVILDAPSYEHL------------AYRFG--VNLVEYVIKNG 371 (371)
T ss_pred HHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHhh------------hhhcC--CCCceEEEeCc
Confidence 999999999987899999999999999998876433 22111 24699999998
No 83
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=100.00 E-value=1e-30 Score=265.22 Aligned_cols=323 Identities=18% Similarity=0.195 Sum_probs=196.8
Q ss_pred eeeeEEEeCCEEEEecCCCCCCC--CceEEecCCCeeeccccccccccccccC----------CC---------------
Q 009282 69 QIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS--------------- 121 (538)
Q Consensus 69 ~~~~V~I~~grI~~Vg~~~~~~~--~~~vID~~G~~v~PGlID~H~H~~~~~~----------~~--------------- 121 (538)
++++|+|+||+|++||+....+. +.++||++|++|+|||||+|+|+..... +.
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILST 81 (377)
T ss_pred CceEEEEECCEEEEEechhhCCcccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCChHHH
Confidence 47899999999999998432222 5689999999999999999999975311 00
Q ss_pred ------CChhhHHH----HHHHHHhCCcEEEecccCCCC--CCHHHHHHHHHHHhcccceeeeee-e---eeec---CC-
Q 009282 122 ------ETIDDFFS----GQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKKAKNSCMDYGFH-M---AITK---WD- 181 (538)
Q Consensus 122 ------~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~---~~- 181 (538)
.++++++. .+..++++||||+.+...... ......++...+...+..+..... . .... ..
T Consensus 82 ~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (377)
T TIGR01224 82 VRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRP 161 (377)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCH
Confidence 11222222 234568899999843211111 012223333333333221221110 0 1111 00
Q ss_pred hhhHHHH-HHHHH---Hc-CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 182 EVVSDEM-EVMVK---EK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 182 ~~~~~~~-~~~~~---~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
++..... +.+.+ .. ++..++.+.. ....+.+.+.++++.|+++|+++.+|+.+..... ..+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~-~~~~~~------- 230 (377)
T TIGR01224 162 DDYVDGICEELIPQVAEEGLASFADVFCE---AGVFSVEQSRRILQAAQEAGLPVKLHAEELSNLG-GAELAA------- 230 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeEEEec---CCCcCHHHHHHHHHHHHHCCCCEEEEecCCCCCC-HHHHHH-------
Confidence 1111111 11111 22 3555554321 2345688999999999999999999995432110 111111
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (538)
..+ ...+.|+...++ +.++++++.|+.++.||.+. +..+..
T Consensus 231 ------------------------~~g-~~~~~H~~~~~~-~~l~~la~~g~~~~~~P~~~-------------~~l~~~ 271 (377)
T TIGR01224 231 ------------------------KLG-AVSADHLEHASD-AGIKALAEAGTVAVLLPGTT-------------FYLRET 271 (377)
T ss_pred ------------------------HcC-CCccHHHhcCCH-HHHHHHHhcCCEEEECchHH-------------HhcCCc
Confidence 112 123557776665 88999999999988887752 111111
Q ss_pred eeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC-CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHH
Q 009282 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCA-FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (538)
Q Consensus 337 ~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~-~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~ea 415 (538)
. .++++++++|+++++|||+.+ .++.. .+...+.......+++++++
T Consensus 272 ---~---------~p~~~l~~~Gv~v~lgTD~~~~~~~~~--------------------~~~~~~~~~~~~~~ls~~ea 319 (377)
T TIGR01224 272 ---Y---------PPARQLIDYGVPVALATDLNPGSSPTL--------------------SMQLIMSLACRLMKMTPEEA 319 (377)
T ss_pred ---C---------ccHHHHHHCCCCEEEECCCCCCCChhH--------------------HHHHHHHHHHHhcCCCHHHH
Confidence 1 237889999999999999754 22111 12222222334456999999
Q ss_pred HHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 416 VRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 416 l~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
++++|.|||+++|+++.+|+|++||.|||||+|.+++..+ ++... ..+|..||++|++
T Consensus 320 l~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~------------~~~~~--~~~v~~v~v~G~~ 377 (377)
T TIGR01224 320 LHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEI------------PYHYG--VNHVHAVIKNGNI 377 (377)
T ss_pred HHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHh------------hhhcC--CCCceEEEECCCC
Confidence 9999999999999987799999999999999998876433 22211 3489999999974
No 84
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=100.00 E-value=1e-30 Score=261.10 Aligned_cols=355 Identities=20% Similarity=0.198 Sum_probs=234.2
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC-----CCChhhHH
Q 009282 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SETIDDFF 128 (538)
Q Consensus 55 ~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-----~~~~~~~~ 128 (538)
++|+|++|++++.. .+++|+|+||+|++|++..+.+.+.++||++|++|+|||||+|+|......- ..+.+.+.
T Consensus 2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~ 81 (382)
T PRK11170 2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELPPGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVETLE 81 (382)
T ss_pred EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCCCCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHHHHH
Confidence 67999999998865 4679999999999998754433456899999999999999999997654211 13556777
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
...+.++++|||+++++...... ...+.++...+.. ......+|+|...+..+.+ ..|+..-...
T Consensus 82 ~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGPfi~~~----------~~Gah~~~~~--- 148 (382)
T PRK11170 82 IMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGPYLNLV----------KKGTHNPEFI--- 148 (382)
T ss_pred HHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecCCCCcc----------cCCCCCHHHh---
Confidence 77888899999999988654443 4455555554432 2356778888888776642 2344322111
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
...+.++++.+.+.+ ..+++.+=+++... .+.++.+.+.|+..+.+|+.+. ++++.++++. |..
T Consensus 149 ---~~p~~~~~~~~~~~~--~~i~~iTlAPE~~~-~~~i~~l~~~gi~vs~GHs~A~-----~~~~~~a~~~----Ga~- 212 (382)
T PRK11170 149 ---RKPDAEMVDFLCENA--DVITKVTLAPEMVD-AEVIRKLVEAGIVVSAGHSNAT-----YEEAKAGFRA----GIT- 212 (382)
T ss_pred ---cCcCHHHHHHHHhcc--CCEEEEEECCCCCc-HHHHHHHHHCCcEEEeeCCcCC-----HHHHHHHHHc----CCC-
Confidence 123567777777654 24566666655443 3788888888888888887543 3444444443 333
Q ss_pred EEEeccCHHH------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-C
Q 009282 287 YVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G 359 (538)
Q Consensus 287 ~~~h~~~~~~------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-G 359 (538)
+++|+.++-. .-.+..+-.. -.+.++..++..++++.. ++-+.+. |
T Consensus 213 ~~THlfNaM~~~~hR~pg~vga~l~~-~~~~~elI~Dg~Hv~p~~--------------------------~~~~~~~k~ 265 (382)
T PRK11170 213 FATHLYNAMPYITGREPGLVGAILDE-PDVYCGIIADGLHVDYAN--------------------------IRNAKRLKG 265 (382)
T ss_pred EEeeccccCCcccCCCcchhhHhhcC-CCcEEEEEcCcccCCHHH--------------------------HHHHHHhcC
Confidence 4677655221 0111111111 134555555555554433 2322222 4
Q ss_pred CceEEeCCCCCCCh---hhhhcCc------cCcccCCCC-CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 360 ILQLVGTDHCAFNS---TQKAFGI------DDFRKIPNG-VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 360 v~~~lgtD~~~~~~---~~~~~~~------~~~~~~~~g-~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
-++.+-||...... ....++. +.......| ++|....+...+++++...++++++|++++|.|||+.+|+
T Consensus 266 ~~~~lvtDa~~~~G~~~g~y~l~~~~v~v~~g~~~~~~G~LAGs~l~l~~~v~~l~~~~~~~~~eal~~aT~npA~~lgl 345 (382)
T PRK11170 266 DKLCLVTDATAPAGANIEQFIFAGKTIYYRDGLCVDENGTLSGSALTMIEAVRNLVEHVGIALDEALRMATLYPARAIGV 345 (382)
T ss_pred CcEEEEeccccCCCCCCCeEEECCEEEEEECCEEECCCCcccccHhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCC
Confidence 56788888553222 1111111 111122334 6777778888888888888899999999999999999999
Q ss_pred CCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 430 ~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
++.+|+|++|+.|||+|+|.+ .+++.||++|++++-
T Consensus 346 ~~~~G~i~~G~~ADlvvld~~-------------------------~~v~~v~~~G~~~~~ 381 (382)
T PRK11170 346 DKRLGSIEAGKVANLTAFTRD-------------------------FKITKTIVNGNEVVT 381 (382)
T ss_pred CCCccccCCCCcCCEEEECCC-------------------------CcEEEEEECCEEeec
Confidence 766899999999999999954 368999999999874
No 85
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.98 E-value=3.1e-31 Score=265.65 Aligned_cols=301 Identities=19% Similarity=0.160 Sum_probs=190.7
Q ss_pred ceEEecCCCeeeccccccccccccccCCCCC----hhh-----HHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHH
Q 009282 93 VKVLDATGKFVMPGGIDPHTHLAMEFMGSET----IDD-----FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK 163 (538)
Q Consensus 93 ~~vID~~G~~v~PGlID~H~H~~~~~~~~~~----~~~-----~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~ 163 (538)
+++||++|++|+|||||+|+|+......... ... .....+.++++||||++|++........+.++.....
T Consensus 1 ~~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~~~~~~~~~~g~~~ 80 (342)
T cd01299 1 AQVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAGGADYGLLRDAIDAGLIP 80 (342)
T ss_pred CcEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCcchHHHHHHHHcCCcc
Confidence 4689999999999999999998664111110 111 1245778899999999999754322112222222222
Q ss_pred hcccce------------eeee---------eeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCC--------CccCCH
Q 009282 164 AKNSCM------------DYGF---------HMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG--------SFMIND 214 (538)
Q Consensus 164 ~~~~~~------------~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~--------~~~~~~ 214 (538)
+++.+. ++.. +.......++...+++++. +.|++.+|+|.++.. ...++.
T Consensus 81 gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~G~~~iK~~~~g~~~~~~~~~~~~~~~~ 159 (342)
T cd01299 81 GPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQL-RRGADQIKIMATGGVLSPGDPPPDTQFSE 159 (342)
T ss_pred CCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHH-HhCCCEEEEeccCCcCCCCCCCcccCcCH
Confidence 222111 1100 1112223455677788877 779999999987531 235789
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH
Q 009282 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (538)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~ 294 (538)
+.++++++.|+++|+++.+|+.+...+...+ +.| .. .+.|+...
T Consensus 160 e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l----~~G-------------------------------~~-~i~H~~~~ 203 (342)
T cd01299 160 EELRAIVDEAHKAGLYVAAHAYGAEAIRRAI----RAG-------------------------------VD-TIEHGFLI 203 (342)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcC-------------------------------CC-EEeecCCC
Confidence 9999999999999999999998764333222 222 22 47898877
Q ss_pred HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChh
Q 009282 295 DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNST 374 (538)
Q Consensus 295 ~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~ 374 (538)
+. +.++++++.|+.+++++.....+...... ..+......+.. ........+++.++++|+++++|||....+..
T Consensus 204 ~~-~~~~~l~~~g~~~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~ 278 (342)
T cd01299 204 DD-ETIELMKEKGIFLVPTLATYEALAAEGAA--PGLPADSAEKVA--LVLEAGRDALRRAHKAGVKIAFGTDAGFPVPP 278 (342)
T ss_pred CH-HHHHHHHHCCcEEeCcHHHHHHHHhhccc--cCCCHHHHHHHH--HHHHHHHHHHHHHHHcCCeEEEecCCCCCCCc
Confidence 76 88999999999888776643221100000 000000000000 00012235678899999999999996531100
Q ss_pred hhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCcee
Q 009282 375 QKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFE 454 (538)
Q Consensus 375 ~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~ 454 (538)
+ ..+...+..+... ++|+.++|+++|.|||+++|+++++|+|++||.|||||+|.|++.+
T Consensus 279 --------------~-----~~~~~e~~~~~~~-~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~pl~d 338 (342)
T cd01299 279 --------------H-----GWNARELELLVKA-GGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGDPLED 338 (342)
T ss_pred --------------h-----hHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCCEEEECCChhhh
Confidence 0 0111222233344 5899999999999999999998889999999999999999998755
Q ss_pred e
Q 009282 455 I 455 (538)
Q Consensus 455 ~ 455 (538)
+
T Consensus 339 i 339 (342)
T cd01299 339 I 339 (342)
T ss_pred h
Confidence 5
No 86
>PLN02303 urease
Probab=99.98 E-value=2e-30 Score=269.54 Aligned_cols=348 Identities=16% Similarity=0.203 Sum_probs=215.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
..+++|+|++|+|..+...++|+|+||||++||+.... .+++++||++|++|+|||||+|+|+..+
T Consensus 333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~P-- 410 (837)
T PLN02303 333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICP-- 410 (837)
T ss_pred cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCC--
Confidence 45799999999996667788999999999999974211 1247899999999999999999998655
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCC-----CC---CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
++ ...++++||||+++++... .. .....++...+......++++++.... ....+++.++
T Consensus 411 g~---------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~~~pvn~Gf~gkG~---~s~l~eL~el 478 (837)
T PLN02303 411 QL---------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTDDLPLNFGFTGKGN---TAKPEGLHEI 478 (837)
T ss_pred cH---------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcccCCCcEEEEccCc---ccCHHHHHHH
Confidence 21 2566777777777654321 00 135666666666656678888765332 2345667777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh---HHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA---VFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
. +.|+.++|.+.. +..+.+.+.+.++.|+++|+++++|+++..+ ++..+ ..+|.+...
T Consensus 479 i-eaGa~GfK~h~d----~gvTpelL~raLe~AkelGVpVaIHAEdLnE~G~vE~t~---~a~G~RpIh----------- 539 (837)
T PLN02303 479 I-KAGAMGLKLHED----WGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSI---AAFKGRTIH----------- 539 (837)
T ss_pred H-HcCcEEEEECCC----CCCCHHHHHHHHHHHHHcCCEEEEecCcccccchHHHHH---HHHCCChHH-----------
Confidence 6 679999987532 3467999999999999999999999987544 33233 223332210
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCC-cEEEecc-----------------ccccccCcccccCCC
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ-RVIGEPV-----------------VSGLVLDDSWLWHSD 330 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~-~v~~~~~-----------------~~~~~~~~~~~~~~~ 330 (538)
..+..| +.-.|. .+.++.....++ +-+.+|+ +|++ ++..-++..
T Consensus 540 ---------~~h~~G--a~ggha-----pdi~~~~~~~nvlpsstnpt~p~t~nt~~e~~dm~m~~h~l--~~~~~edva 601 (837)
T PLN02303 540 ---------TYHSEG--AGGGHA-----PDIIKVCGVKNVLPSSTNPTRPYTKNTIDEHLDMLMVCHHL--DKNIPEDVA 601 (837)
T ss_pred ---------HHHhcC--CCCCCC-----cHHHHhcCCCCccCCCCCCCCCCccCchhhhcCeEEeecCC--CCCCcchhh
Confidence 000000 000010 011211111111 0001111 1222 222211112
Q ss_pred cccccceeecCCCCCcccHHHHH-HHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh-h--
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQ-AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV-E-- 406 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~-~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~-- 406 (538)
|.. .|.+....+.. -+++.|+...++||+.....-.. ...++| ....++. .
T Consensus 602 fa~---------srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge-----~i~r~~-----------q~A~k~~~~~g 656 (837)
T PLN02303 602 FAE---------SRIRAETIAAEDILHDMGAISIISSDSQAMGRIGE-----VITRTW-----------QTAHKMKSQRG 656 (837)
T ss_pred hhh---------hhccchhhccchhhhccCCEEEEeccchhhCcccc-----eeeehH-----------HHHHHHHHhcC
Confidence 211 12222222233 35667999999999764433211 111111 1111111 1
Q ss_pred --------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEE
Q 009282 407 --------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKV 478 (538)
Q Consensus 407 --------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 478 (538)
....+.+++|++.|+|||+++|+++.+|||++||.||||||+++.+ ..++
T Consensus 657 ~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~f----------------------g~~~ 714 (837)
T PLN02303 657 ALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFF----------------------GAKP 714 (837)
T ss_pred CCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEeccccc----------------------CCCe
Confidence 1235679999999999999999999999999999999999997543 2468
Q ss_pred EEEEECCEEEEEC-Ceeecc
Q 009282 479 EVTIAGGRVVWEN-DELNVV 497 (538)
Q Consensus 479 ~~V~v~G~~V~~~-~~~~~~ 497 (538)
..||++|++||.. |.....
T Consensus 715 ~~vi~~G~ivy~~~gd~nas 734 (837)
T PLN02303 715 EMVIKGGQIAWAQMGDPNAS 734 (837)
T ss_pred eEEEECCEEEEccCCCcccc
Confidence 9999999999998 665544
No 87
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.98 E-value=9.4e-30 Score=261.65 Aligned_cols=358 Identities=20% Similarity=0.205 Sum_probs=215.2
Q ss_pred cccEEEECcEEEcC------------CCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNA------------HHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~------------~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
...+.|+|+++-+. +.....+|.|+||||++|++....+.+.++||++|++|+|||||+|+|+...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~~~~~~id~~g~~v~Pg~id~H~Hld~~~~ 89 (438)
T PRK07583 10 SGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAPDELPAVDLKGRMVWPCFVDMHTHLDKGHI 89 (438)
T ss_pred CCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCCCCCceecCCCCcccCCcccceecccccee
Confidence 34588888886432 122467999999999999987643446789999999999999999999866411
Q ss_pred C-----------------------CCChhh----HHHHHHHHHhCCcEEEecccCCC-C--CCHHHHHHHHHHHhcc-c-
Q 009282 120 G-----------------------SETIDD----FFSGQAAALAGGTTMHIDFVIPI-N--GSLTAGFEAYEKKAKN-S- 167 (538)
Q Consensus 120 ~-----------------------~~~~~~----~~~~~~~~l~~GvTt~~d~~~~~-~--~~~~~~~~~~~~~~~~-~- 167 (538)
. ..+.++ +....+.++.+|+|+++...... . ....+.+....+.... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~~~~~~~~ 169 (438)
T PRK07583 90 WPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELREAWAGRIA 169 (438)
T ss_pred cCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHHHhhccCe
Confidence 0 001233 44556778899999666543211 1 1122223222222211 1
Q ss_pred ---ceeeeeeeeeecCChhhHHHHHHHHHHc-CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHH
Q 009282 168 ---CMDYGFHMAITKWDEVVSDEMEVMVKEK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVF 242 (538)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~ 242 (538)
...++++.... +...++.+...+. |..+.+.+.. + -+.+.+.++++.|+++|+++.+|+. ......
T Consensus 170 ~~~v~~~p~~~~~~----~~~~eL~~~v~~~~gv~g~~~~~~----~-~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~~ 240 (438)
T PRK07583 170 LQAVSLVPLDAYLT----DAGERLADLVAEAGGLLGGVTYMN----P-DLDAQLDRLFRLARERGLDLDLHVDETGDPAS 240 (438)
T ss_pred EEEEEecChhhccC----chHHHHHHHHHHcCCEEeCCCCCC----C-CHHHHHHHHHHHHHHhCCCcEEeECCCCCchH
Confidence 11122211111 1124444444233 3333322211 1 1568899999999999999999994 332211
Q ss_pred HHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHc--CCCEEEEeccCHHH------HHHHHHHHHcCCcEEEec
Q 009282 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV--NTPLYVVHVMSMDA------MEEIAKARKAGQRVIGEP 314 (538)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~~h~~~~~~------~~~i~~~~~~g~~v~~~~ 314 (538)
..+ ....+.+... ..++++.|+..... .+.++++++.|+.++.||
T Consensus 241 ~~l---------------------------~~~~~~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P 293 (438)
T PRK07583 241 RTL---------------------------KAVAEAALRNGFEGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLP 293 (438)
T ss_pred HHH---------------------------HHHHHHHHHhCCCCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECc
Confidence 111 1111222222 24688999976441 278999999999999888
Q ss_pred cccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCC-cch
Q 009282 315 VVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGV-NGI 393 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~-~g~ 393 (538)
............ ..|.. ....+++.++++|+++++|||+... +|. |+|. ..+
T Consensus 294 ~~~~~l~~~~~~------------~~p~~---~~~~~v~~l~~aGV~valGtD~~~d----------~~~--p~g~~~~~ 346 (438)
T PRK07583 294 MCNLYLQDRQPG------------RTPRW---RGVTLVHELKAAGIPVAVASDNCRD----------PFY--AYGDHDML 346 (438)
T ss_pred chhhhhcCCCcC------------CCCCC---CCcchHHHHHHCCCeEEEEeCCCCC----------CCC--CCCCcCHH
Confidence 753211100000 01111 1224588999999999999997531 221 2221 111
Q ss_pred hhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE
Q 009282 394 EERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 473 (538)
Q Consensus 394 ~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
+. +.... ... ..+.++.++|+++|.|||+++|+++ +|+|++||.|||||+|.+++..+.. .
T Consensus 347 ~~-~~~a~-~~~-~~~~~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~~~~~------------~--- 407 (438)
T PRK07583 347 EV-FREAV-RIL-HLDHPYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFSELLS------------R--- 407 (438)
T ss_pred HH-HHHHH-HHH-hcCCcHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHHHHHh------------c---
Confidence 11 11111 111 2247899999999999999999965 8999999999999999987644311 0
Q ss_pred EeeEEEEEEECCEEEEECC
Q 009282 474 VKGKVEVTIAGGRVVWEND 492 (538)
Q Consensus 474 ~~~~v~~V~v~G~~V~~~~ 492 (538)
...+..||++|++|++..
T Consensus 408 -~~~~~~V~~~G~~v~~~~ 425 (438)
T PRK07583 408 -PQSDRIVLRAGKPIDTTL 425 (438)
T ss_pred -CCCccEEEECCEEecccC
Confidence 235778999999987653
No 88
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.98 E-value=3.6e-29 Score=254.62 Aligned_cols=361 Identities=19% Similarity=0.219 Sum_probs=208.4
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCC--CCceEEecCCCeeeccccccccccccccCC-CCChhhHHHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~--~~~~vID~~G~~v~PGlID~H~H~~~~~~~-~~~~~~~~~~~ 131 (538)
++|+|++|++++...+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... ...........
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~ 81 (387)
T cd01308 2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVTL 81 (387)
T ss_pred EEEECcEEeCCCCccceEEEEECCEEEEEeCCcccccCCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHHH
Confidence 579999999987767889999999999999865332 357899999999999999999998653100 00111222345
Q ss_pred HHHHhCCcEEEecccCCCCC-CHH----HHHHHHHHHhcccceeeeeeeeee-cCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 132 AAALAGGTTMHIDFVIPING-SLT----AGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
..++++|+||++|+...... ... ...+...+.+-+.+...+++.... ...+....++.......+ .+. ....
T Consensus 82 ~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~-~~~~ 159 (387)
T cd01308 82 SDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYEVPTRTITGSIRKDLLLIDKVIG-VGE-IAIS 159 (387)
T ss_pred HHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCcCchhhHHHHHHHHHHhcC-cce-EEEc
Confidence 67799999999998732221 112 223333334434333332211000 001111111222111112 111 1112
Q ss_pred eCCCccCCHHHHHHHHHHHHhcCC------eEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 206 YKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
..+........+.++...++..+. .+++|..... ..++++.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~------------------------------~~~~~i~~~~ 209 (387)
T cd01308 160 DHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGK------------------------------RALSPIFELI 209 (387)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCch------------------------------HHHHHHHHHH
Confidence 222234456777777777765433 3566664221 2233344444
Q ss_pred HHcCCCE-EEEeccCHHHHH---HHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHH
Q 009282 280 EFVNTPL-YVVHVMSMDAME---EIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAA 355 (538)
Q Consensus 280 ~~~~~~~-~~~h~~~~~~~~---~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~ 355 (538)
.+.|.++ ++.|.......+ ...+..++|..+-...... ..+...|+. ...+.++.+
T Consensus 210 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~-----------------~~~~~~~~~---~~~~~l~~~ 269 (387)
T cd01308 210 EETEIPITQFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSID-----------------PQFRKEGEV---RPSEALKRL 269 (387)
T ss_pred HhcCCCcceeECCcccCCHHHHHHHHHHHHcCCcEEEECCCC-----------------ccccccCcc---ChHHHHHHH
Confidence 4445544 444443322212 2223444565443321110 001111111 124667888
Q ss_pred HhcCC---ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCC
Q 009282 356 LATGI---LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 432 (538)
Q Consensus 356 l~~Gv---~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~ 432 (538)
++.|+ +++++||+....+.... .+.+ .+.|..+....+.... .++..+++|++++++++|.|||+++|+++
T Consensus 270 ~~~g~~~d~i~l~TD~~~~~p~~~~--~g~~--~~~g~~~~~~~~~~~~-~~v~~~~i~~~~al~~~T~npA~~lg~~~- 343 (387)
T cd01308 270 LEQGVPLERITFSSDGNGSLPKFDE--NGNL--VGLGVGSVDTLLREVR-EAVKCGDIPLEVALRVITSNVARILKLRK- 343 (387)
T ss_pred HHhCCCCCcEEEEECCCCCcccCcc--CCeE--EecCcCcHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHhCCCC-
Confidence 99986 36999997422111000 0011 1345555554444443 66677789999999999999999999954
Q ss_pred CcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 433 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 433 ~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
+|+|++|+.|||+++|.+ .++..|+++|++|+++|+++.++
T Consensus 344 ~G~i~~G~~ADlvv~d~~-------------------------~~~~~~~~~G~~v~~~~~~~~~~ 384 (387)
T cd01308 344 KGEIQPGFDADLVILDKD-------------------------LDINSVIAKGQIMVRNGKLLVKG 384 (387)
T ss_pred CCCcCCCCcCCEEEEcCC-------------------------CCEEEEEECCEEEEECCeEeecc
Confidence 899999999999999965 15788999999999999998654
No 89
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.97 E-value=4.3e-29 Score=248.00 Aligned_cols=320 Identities=16% Similarity=0.152 Sum_probs=231.6
Q ss_pred eccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHH-HHhccc-ceeeeeeeeeecC
Q 009282 104 MPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYE-KKAKNS-CMDYGFHMAITKW 180 (538)
Q Consensus 104 ~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~ 180 (538)
+||+||+|+|+..+ +++.+.++++.++| |++++|....+. ...+.++... ...... +.++.++......
T Consensus 3 ~Pg~iD~h~h~~~~-------~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 74 (335)
T cd01294 3 IPRPDDMHLHLRDG-------AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPGPNFTPLMTLYLT 74 (335)
T ss_pred CCCcceeEecCCCc-------hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEecc
Confidence 69999999999742 78888899999999 999999654322 2233233332 222333 3455544443222
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeee----CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
.+...++++++.+..|+.++|+|... .+....+.+.+..+++.+.+.|+++.+|+++......
T Consensus 75 ~~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~------------- 141 (335)
T cd01294 75 ENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKID------------- 141 (335)
T ss_pred CCCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCccccc-------------
Confidence 22245677777644599999998642 1122235688999999999999999999987542110
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHc-CCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (538)
+...+.+.+.++..++.+. +.++|+.|+++...++.++..++ +|++++++|||.++++.+.... .+.
T Consensus 142 -------~~~~e~~~~~~~~~lA~~~p~~~v~i~Hvst~~~~~~i~~ak~---~vt~Et~ph~L~l~~~~~~~~~--~g~ 209 (335)
T cd01294 142 -------VLDREAKFIPVLEPLAQRFPKLKIVLEHITTADAVEYVKSCNE---NVAATITPHHLLLTRDDLLGGG--LNP 209 (335)
T ss_pred -------chhhHHHHHHHHHHHHHHcCCCeEEEecccHHHHHHHHHhCCC---CcEEEEchhHheeeHHHhcCCC--CCC
Confidence 0011223456678888874 99999999999887777765544 7999999999999988764311 247
Q ss_pred ceeecCCCCCcccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHH
Q 009282 336 KYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTD 414 (538)
Q Consensus 336 ~~~~~p~~r~~~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~e 414 (538)
.++++||+|...+++.+|++++.|... .++|||+|++...|.. ++. ..|+.+++..++.++ ..+. +++|+++
T Consensus 210 ~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~---~~g--~~Gi~~~~~~l~~~~-~~~~-~~l~l~~ 282 (335)
T cd01294 210 HLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKES---SCG--CAGIFSAPIALPYLA-EVFE-EHNALDK 282 (335)
T ss_pred CeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccC---CCC--CccccCHHHHHHHHH-HHHh-ccCCHHH
Confidence 899999999999999999999999999 5999999999877641 222 225555554666666 4444 4799999
Q ss_pred HHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE
Q 009282 415 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 473 (538)
Q Consensus 415 al~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
+++..+.|||++||+.+.+|+| ++.+ ..|.++.+++.+...|+||+|..
T Consensus 283 ~v~~~s~nPA~i~gl~~~kg~i--------~~~~--~~~~v~~~~~~s~~~~sp~~g~~ 331 (335)
T cd01294 283 LEAFASDNGPNFYGLPPNKKTI--------TLVK--EPWKVPEKIPFGNNGVVPFRAGE 331 (335)
T ss_pred HHHHHHhHHHHHhCCCCCCCeE--------EEEe--eceEcCchhccCCCceecccCCc
Confidence 9999999999999996655554 4554 77889888999999999999864
No 90
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.97 E-value=9.2e-29 Score=248.80 Aligned_cols=325 Identities=21% Similarity=0.274 Sum_probs=198.6
Q ss_pred EEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccccc-CCCCChhhHHHHHHHH
Q 009282 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFSGQAAA 134 (538)
Q Consensus 56 ~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~-~~~~~~~~~~~~~~~~ 134 (538)
+|+|++|+++....+.+|+|+||+|++|++..+.+.+.++||++|++|+|||||+|+|.+... ....+.+.+....+.+
T Consensus 2 ~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~~ 81 (374)
T cd00854 2 IIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELEEADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEAL 81 (374)
T ss_pred EEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcccCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHHHHHH
Confidence 789999999844468899999999999988654444568999999999999999999986541 1122467788889999
Q ss_pred HhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc--cceeeeeeeeeecCCh-------------hhHHHHHHHHHHcCCc
Q 009282 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN--SCMDYGFHMAITKWDE-------------VVSDEMEVMVKEKGIN 198 (538)
Q Consensus 135 l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~ 198 (538)
+++||||++++...... ...+.+..+.+.... +...++++...+..+. ...++++++. ..+.+
T Consensus 82 ~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~-~~~~~ 160 (374)
T cd00854 82 AKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWL-EAAGG 160 (374)
T ss_pred HccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHH-HhcCC
Confidence 99999999998644332 344444554443322 2344444443332211 1235667776 45568
Q ss_pred EEEEEeeeCCCccCCHHHH--HHHHHHHHhcCCeEE-EEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 199 SFKFFMAYKGSFMINDELL--IEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l--~~~~~~A~~~g~~v~-~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
.+|++. +.+|.. .+++++++++|+++. .|.... ........+.|+..
T Consensus 161 ~ik~~t-------laPE~~~~~~~i~~~~~~gi~v~~GH~~a~---~~~~~~a~~~G~~~-------------------- 210 (374)
T cd00854 161 LIKLVT-------LAPELDGALELIRYLVERGIIVSIGHSDAT---YEQAVAAFEAGATH-------------------- 210 (374)
T ss_pred CEEEEE-------ECCCCCChHHHHHHHHHCCeEEEeeCCcCC---HHHHHHHHHcCCCe--------------------
Confidence 888862 345555 789999999999995 998632 12223333445543
Q ss_pred HHHHHHcCCCEEEEeccCHHH------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccH
Q 009282 276 IRLAEFVNTPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~~~------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 349 (538)
++|+.+.-. ...+...-+.. .++++.+.+..+++++
T Consensus 211 ------------~tH~~n~m~~~~~r~~~~~~a~l~~~-~~~~~li~dg~Hv~~~------------------------- 252 (374)
T cd00854 211 ------------VTHLFNAMSPLHHREPGVVGAALSDD-DVYAELIADGIHVHPA------------------------- 252 (374)
T ss_pred ------------eeECCCCCCCcCCCCCcHHHHhhcCC-CCeEEEEcCCCcCCHH-------------------------
Confidence 333322100 00011011000 1223333332222221
Q ss_pred HHHHHHHhc-C-CceEEeCCCCCCCh---hhhhcC-------ccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 350 KALQAALAT-G-ILQLVGTDHCAFNS---TQKAFG-------IDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 350 ~~l~~~l~~-G-v~~~lgtD~~~~~~---~~~~~~-------~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
.+..+.+. | -++++.||...... ....+. .+.........+|....+...++.++..++++++++++
T Consensus 253 -~~~~~~r~~g~~~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~l~~~~~~l~~~~~l~~~~al~ 331 (374)
T cd00854 253 -AVRLAYRAKGADKIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLAGSTLTMDQAVRNMVKWGGCPLEEAVR 331 (374)
T ss_pred -HHHHHHHhcCCCcEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCeeehHhhHHHHHHHHHHhhCCCHHHHHH
Confidence 12222222 3 34555666422111 000000 00111111224555566777777788888899999999
Q ss_pred HHhHhHHHHcCCCCCCcccccCCCccEEEEcCC
Q 009282 418 LTSTECARIFNVYPRKGAILVGSDADIIIFNPN 450 (538)
Q Consensus 418 ~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~ 450 (538)
++|.|||+++|++++.|+|++|+.|||+++|.+
T Consensus 332 ~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~ 364 (374)
T cd00854 332 MASLNPAKLLGLDDRKGSLKPGKDADLVVLDDD 364 (374)
T ss_pred HHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCC
Confidence 999999999999777999999999999999965
No 91
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=7.3e-30 Score=242.22 Aligned_cols=360 Identities=18% Similarity=0.176 Sum_probs=227.0
Q ss_pred eeeeEEEeC-CEEEEecCCCCCC----------CCceEEecCCCeeecccccccccccccc----C--------------
Q 009282 69 QIADVYVED-GIVVAVQPNINVG----------DDVKVLDATGKFVMPGGIDPHTHLAMEF----M-------------- 119 (538)
Q Consensus 69 ~~~~V~I~~-grI~~Vg~~~~~~----------~~~~vID~~G~~v~PGlID~H~H~~~~~----~-------------- 119 (538)
++..+.|.+ |+|+.|++..... +..++++.+|.++||||||+|+|....+ .
T Consensus 26 e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~ 105 (439)
T KOG3968|consen 26 EGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYT 105 (439)
T ss_pred cCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhcce
Confidence 466778887 9999999854322 2357899999999999999999942210 0
Q ss_pred ----CCCCh-hhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-------eecCChh
Q 009282 120 ----GSETI-DDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-------ITKWDEV 183 (538)
Q Consensus 120 ----~~~~~-~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 183 (538)
...+. ++. ....+..+++|+||+....+.........++...+.+.+..+.-..+.. .....++
T Consensus 106 f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~~~p~~~~~~E~ 185 (439)
T KOG3968|consen 106 FPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAHAVPKGVETTEE 185 (439)
T ss_pred eecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCCCCCccchhHHH
Confidence 11122 222 2334567999999998665333334455566666666664443221111 1111222
Q ss_pred hHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcccc
Q 009282 184 VSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 184 ~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
..+..+++.. ..+.......+.+.-...++.+.+....+.|+...+++..|. ++..++........+.
T Consensus 186 si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~-------- 257 (439)
T KOG3968|consen 186 SIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEK-------- 257 (439)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhc--------
Confidence 2222222221 222222211112222345678888888888999999999999 6666666555442211
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
..-..+.+....++....+.|+...++ +.++.++++|..|++||++ +..++++.
T Consensus 258 ----------~~y~~~yd~~~lL~~ktvlaH~~hl~d-~ei~~l~k~g~svshCP~S-------------n~~L~sG~-- 311 (439)
T KOG3968|consen 258 ----------LSYTDVYDKGGLLTEKTVLAHLEHLSD-EEIELLAKRGCSVSHCPTS-------------NSILGSGI-- 311 (439)
T ss_pred ----------ccchHHHHHhcccchHhHhhhheecCc-hhHHHHHhcCCceEECCcc-------------hhhhccCC--
Confidence 112223334555565666777776666 8899999999999999997 44444443
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHH
Q 009282 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~a 419 (538)
.+++++++.|+.+.+|||..+.+....+. .++.+...+....+.-+||++|+|.+|
T Consensus 312 ----------~~vr~lL~~~v~VgLGtDv~~~s~l~a~r--------------~A~~~s~hL~~~~~~~~Ls~~e~L~lA 367 (439)
T KOG3968|consen 312 ----------PRVRELLDIGVIVGLGTDVSGCSILNALR--------------QAMPMSMHLACVLDVMKLSMEEALYLA 367 (439)
T ss_pred ----------ccHHHHHhcCceEeecCCccccccHHHHH--------------HHHHHHHHHHhccCcccCCHHHHHHHH
Confidence 33899999999999999987543322110 022222223222244679999999999
Q ss_pred hHhHHHHcCCCCCCcccccCCCccEEEEcCCCce----eeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 420 STECARIFNVYPRKGAILVGSDADIIIFNPNSSF----EITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 420 T~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
|+|+|++||+++..|++++||.+|++++|.+.+. .++ ..++......|.|- .+++..|||+|+.|++
T Consensus 368 Ti~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~~~~l~~~~--~~~~lI~~~v~~g~--drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 368 TIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAPESPLYRFS--GHHDLISKVVYNGD--DRNIAEVFVAGKLVKQ 438 (439)
T ss_pred hccchhhccCCCcccceecccccceEEEeCCCCcchhhhcc--chHHHHHHHHhcCC--CCceEEEEEccEEecc
Confidence 9999999999999999999999999999987651 111 01222223355554 4689999999999975
No 92
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=2.6e-28 Score=244.19 Aligned_cols=315 Identities=23% Similarity=0.199 Sum_probs=186.1
Q ss_pred CCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC-------------CC--------hhhHHHHHHHHH
Q 009282 77 DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-------------ET--------IDDFFSGQAAAL 135 (538)
Q Consensus 77 ~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~-------------~~--------~~~~~~~~~~~l 135 (538)
||||++|+++...+.++++||++|++|+|||||+|+|++....+. .+ .+........+.
T Consensus 1 ~gkI~~i~~~~~~~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~~a~ 80 (359)
T cd01309 1 DGKIVAVGAEITTPADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFKRAR 80 (359)
T ss_pred CCEEEEEcCCCCCCCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHHHHH
Confidence 799999999776676789999999999999999999998752210 00 001123456788
Q ss_pred hCCcEEEecccCCCCC-C-------HHH-HHHHHHHHhcccceeeeee--eeeec-------CCh-hhHHHHHHHH---H
Q 009282 136 AGGTTMHIDFVIPING-S-------LTA-GFEAYEKKAKNSCMDYGFH--MAITK-------WDE-VVSDEMEVMV---K 193 (538)
Q Consensus 136 ~~GvTt~~d~~~~~~~-~-------~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~-~~~~~~~~~~---~ 193 (538)
++|||++......... . ... ..+... ......+.+.+. ..... .+. .....+++.. +
T Consensus 81 ~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~-~~~~~~~~~a~g~~~~~~~~~~~~~p~trmg~~~~lr~~~~~a~ 159 (359)
T cd01309 81 AGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMF-IKAPAGLKMALGENPKRVYGGKGKEPATRMGVAALLRDAFIKAQ 159 (359)
T ss_pred hcCceEEEecCCCCCcccceEEEEECCCCCHHHhc-ccCCceeEEecCCCCcccccccCCCccchHHHHHHHHHHHHHHH
Confidence 9999999755422211 0 000 001000 001111111110 00000 000 0011111111 0
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
++.....+ +.+..+........++.++..++.. +++.+|+.... ++.
T Consensus 160 ~y~~~~~~-~~~~~~~~~~~d~~l~~l~~~~~~~-~~v~vHa~~~~-------------------------------~i~ 206 (359)
T cd01309 160 EYGRKYDL-GKNAKKDPPERDLKLEALLPVLKGE-IPVRIHAHRAD-------------------------------DIL 206 (359)
T ss_pred HHHHHhhh-hhhcccCCCCCCccHHHHHHHHcCC-eeEEEEeCCHH-------------------------------HHH
Confidence 11000000 0000000011233455555555433 78888887543 355
Q ss_pred HHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHH
Q 009282 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQ 353 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~ 353 (538)
++++++.+++.++.+.|+... .+.++++++.|+.++.+|..... ...+. .......+.
T Consensus 207 ~~l~~~~e~g~~~~i~H~~~~--~~~~~~la~~gv~v~~~P~~~~~-~~~~~-------------------~~~~~~~~~ 264 (359)
T cd01309 207 TAIRIAKEFGIKITIEHGAEG--YKLADELAKHGIPVIYGPTLTLP-KKVEE-------------------VNDAIDTNA 264 (359)
T ss_pred HHHHHHHHcCCCEEEECchhH--HHHHHHHHHcCCCEEECcccccc-ccHHH-------------------hhcchhhHH
Confidence 666777778888899999876 37889999999999887764110 00000 001123467
Q ss_pred HHHhcC-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCC
Q 009282 354 AALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPR 432 (538)
Q Consensus 354 ~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~ 432 (538)
.++++| ++++++||+...+.. .+......++. .+++.+++|+++|.|||+++|++++
T Consensus 265 ~l~~aGGv~valgsD~~~~~~~---------------------~l~~~~~~a~~-~gl~~~~al~~~T~n~A~~lg~~~~ 322 (359)
T cd01309 265 YLLKKGGVAFAISSDHPVLNIR---------------------NLNLEAAKAVK-YGLSYEEALKAITINPAKILGIEDR 322 (359)
T ss_pred HHHHcCCceEEEECCCCCccch---------------------hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 888997 999999997532110 11222222333 4599999999999999999999888
Q ss_pred CcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEE
Q 009282 433 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 489 (538)
Q Consensus 433 ~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~ 489 (538)
+|+|++||.|||||||++++.. ..+|..||++|++||
T Consensus 323 ~G~l~~G~~ADlvv~d~dpl~~--------------------~~~v~~v~i~G~~v~ 359 (359)
T cd01309 323 VGSLEPGKDADLVVWNGDPLEP--------------------TSKPEQVYIDGRLVY 359 (359)
T ss_pred cccCCCCCccCEEEECCCcccc--------------------cCcccEEEECCEEeC
Confidence 9999999999999999885422 247999999999986
No 93
>PRK06846 putative deaminase; Validated
Probab=99.97 E-value=1.1e-27 Score=244.57 Aligned_cols=349 Identities=14% Similarity=0.122 Sum_probs=202.6
Q ss_pred cEEEECcEEEcCCC----------ceeeeEEEeCCEEEEecCCCCC-CCCceEEecCCCeeeccccccccccccccCC-C
Q 009282 54 KILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-S 121 (538)
Q Consensus 54 ~~~i~n~~vv~~~~----------~~~~~V~I~~grI~~Vg~~~~~-~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-~ 121 (538)
.+.|+|+++..+.. ....+|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+...... .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~ 84 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTYYGGP 84 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCCCCCCCceEeCCCCEEecCEEeeeecccchhhccc
Confidence 35677766643322 2467999999999999986332 2346899999999999999999999764211 1
Q ss_pred C-C------------------h---hhH----HHHHHHHHhCCcEEEecccCCCCC----CHHHHHHHHHHHhcccceee
Q 009282 122 E-T------------------I---DDF----FSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDY 171 (538)
Q Consensus 122 ~-~------------------~---~~~----~~~~~~~l~~GvTt~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 171 (538)
. . + ... ......++++|+|+++++...... ......+...+.. ..+..
T Consensus 85 ~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~--~~v~~ 162 (410)
T PRK06846 85 WKACRPAKTIQDRIELEQKELPELLPTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYK--DGFTY 162 (410)
T ss_pred hhhcCCcccHHHHHhhhhhhHHHhHHHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhh--CcceE
Confidence 0 0 0 001 122344567899999887643222 1111112222211 12221
Q ss_pred eeee-eeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHH
Q 009282 172 GFHM-AITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRM 248 (538)
Q Consensus 172 ~~~~-~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~ 248 (538)
+... .... ...+....+.+.. +.|+..++.. .+......+.+.+.++++.|+++|+++++|..+.. .....
T Consensus 163 ~~~a~~~~g~~~~~~~~lL~~al-~~Ga~~i~gl-~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~---- 236 (410)
T PRK06846 163 EIVAFPQHGLLRSNSEPLMREAM-KMGAHLVGGV-DPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVAT---- 236 (410)
T ss_pred EEEeccCcccCCccHHHHHHHHH-HcCCCEEeCC-CCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHH----
Confidence 1110 0000 0122234455555 6788866633 33333455688999999999999999999985432 11111
Q ss_pred HHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC--CCEEEEeccCH---HH--H-HHHHHHHHcCCcEEEeccccccc
Q 009282 249 IELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSM---DA--M-EEIAKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 249 ~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~h~~~~---~~--~-~~i~~~~~~g~~v~~~~~~~~~~ 320 (538)
+.+.++...+.+ .++++.|+... +. . +.++++++.|+.|+.+..
T Consensus 237 -----------------------~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~----- 288 (410)
T PRK06846 237 -----------------------IKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP----- 288 (410)
T ss_pred -----------------------HHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC-----
Confidence 112222222222 27899999753 22 1 225579999998875421
Q ss_pred cCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
.+.++ +| +++++++|+++++|||....+ + .|++...+...+...
T Consensus 289 ------------~~~g~---~p---------~~~l~~~Gv~v~lGtD~~~~~----------~--~p~~~~d~~~~~~~~ 332 (410)
T PRK06846 289 ------------IGRLH---MP---------IPLLHDKGVKVSLGTDSVIDH----------W--SPFGTGDMLEKANLL 332 (410)
T ss_pred ------------CCCCC---CC---------HHHHHhCCCeEEEecCCCCCC----------C--cCCCCCCHHHHHHHH
Confidence 11111 22 889999999999999964210 0 011111111111111
Q ss_pred HHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEE
Q 009282 401 WDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 480 (538)
Q Consensus 401 ~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (538)
.....-...-+..++|+++|.++ ..++.++.+|+|+|||.|||||+|.+.+.... +. ...+..
T Consensus 333 ~~~~~~~~~~~~~~~l~~~T~~a-~~l~~~~~~G~l~~G~~ADlvlld~~~~~~~~------------~~----~~~v~~ 395 (410)
T PRK06846 333 AELYRWSDERSLSRSLALATGGV-LPLNDEGERVWPKVGDEASFVLVDASCSAEAV------------AR----QSPRTA 395 (410)
T ss_pred HHHhcCCCHHHHHHHHHHHcCCc-cccccCCCccCCCCCCcccEEEEeCCChHHHH------------Hh----cCCceE
Confidence 10000001123557999999985 56887778899999999999999976532111 11 347999
Q ss_pred EEECCEEEEEC
Q 009282 481 TIAGGRVVWEN 491 (538)
Q Consensus 481 V~v~G~~V~~~ 491 (538)
||++|++||..
T Consensus 396 v~~~G~~v~~~ 406 (410)
T PRK06846 396 VFHKGQLVAGS 406 (410)
T ss_pred EEECCEEEeee
Confidence 99999999985
No 94
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.96 E-value=9.6e-27 Score=210.37 Aligned_cols=311 Identities=18% Similarity=0.263 Sum_probs=199.4
Q ss_pred cccEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc-cCCCCChhhHH
Q 009282 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME-FMGSETIDDFF 128 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~-~~~~~~~~~~~ 128 (538)
..+++|+|++++++... +..+|.|.||||++++ +.+.|..+++||++|.+|.||+||.|+|.+.. ..+...+
T Consensus 3 qfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~-d~~apa~tq~Ida~Gc~VspG~iDlHvHvy~ggt~~~v~p---- 77 (386)
T COG3964 3 QFDILLTGGRLIDPARGIDEITNIAIINGKIAAAD-DYPAPAETQIIDADGCIVSPGLIDLHVHVYYGGTEGGVRP---- 77 (386)
T ss_pred ccceeeeCCeecccccccCccceeeeecCeEEecc-CcCCChhheEEccCccEeccCeeeeeeEEecCCCccCcCH----
Confidence 56899999999987643 5679999999999999 67777789999999999999999999999876 1112222
Q ss_pred HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc---ccceeeeeeeeeecCCh------hhHHHHHHHHHHcC--C
Q 009282 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDYGFHMAITKWDE------VVSDEMEVMVKEKG--I 197 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g--~ 197 (538)
......+||||++|.+..+..+.....+...+... ..++++.+.+-. ..+| -..+++.+..++.. .
T Consensus 78 --d~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs~~Gl~-a~nE~~d~~nid~d~i~aa~reh~d~i 154 (386)
T COG3964 78 --DMYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVSPPGLT-ASNELYDPDNIDEDKIHAAFREHRDVI 154 (386)
T ss_pred --HHccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeeccCccee-eehhhCChhhCCHHHHHHHHHhCcCcE
Confidence 23468899999999976655544444443333332 134443332211 1111 12344555553332 2
Q ss_pred cEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHH
Q 009282 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (538)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l 276 (538)
.++|+-.+......+-..-+....+.|+..++|+++|..++. .+++.++.+
T Consensus 155 vGlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~dEvlerL---------------------------- 206 (386)
T COG3964 155 VGLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLMDEVLERL---------------------------- 206 (386)
T ss_pred EEEEEEeeeccccccCCchHHHHHHHHhhcCCceEEecCCCCccHHHHHHhc----------------------------
Confidence 455654443222222333466677788899999999996543 233443332
Q ss_pred HHHHHcCCCEEEEeccCH----------HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCc
Q 009282 277 RLAEFVNTPLYVVHVMSM----------DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS 346 (538)
Q Consensus 277 ~~~~~~~~~~~~~h~~~~----------~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 346 (538)
...-+++||... .-...+++.+++|+.. +.. |. ...+.
T Consensus 207 ------~~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~f--D~g-hG---------------~asfs-------- 254 (386)
T COG3964 207 ------RRGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIF--DAG-HG---------------RASFS-------- 254 (386)
T ss_pred ------cCCceeeeeccCCCCCccccchhHHHHHHHHHhcceEE--Ecc-CC---------------cceee--------
Confidence 122256676541 1234566677777533 221 10 01111
Q ss_pred ccHHHHHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHH
Q 009282 347 GHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECAR 425 (538)
Q Consensus 347 ~~~~~l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~ 425 (538)
..-.+.++..|. +..++||-...+. +++-...+...+.++...| +++.++++++|.|||.
T Consensus 255 --f~vAr~aia~GllP~~ISSDlh~~~~----------------~n~Pv~dla~~mSKllalg-mpl~~Vi~avT~npA~ 315 (386)
T COG3964 255 --FNVARRAIANGLLPDIISSDLHTITK----------------LNGPVYDLAWIMSKLLALG-MPLTDVINAVTHNPAV 315 (386)
T ss_pred --HHHHHHHHhcCCCcceeeccceeeee----------------cCchHHHHHHHHHHHHHcC-CcHHHHHHHHhcCHHH
Confidence 012456777776 6788888543321 2233456777777777777 9999999999999999
Q ss_pred HcCCCCCCcccccCCCccEEEEcCC
Q 009282 426 IFNVYPRKGAILVGSDADIIIFNPN 450 (538)
Q Consensus 426 ~lg~~~~~GsI~~Gk~ADlvvld~~ 450 (538)
.+++ +.+|+|+||..|||+||+-.
T Consensus 316 ~i~l-~~~gtLa~G~~aD~tvf~lk 339 (386)
T COG3964 316 LIGL-AEIGTLAPGAFADITVFKLK 339 (386)
T ss_pred HhCc-cccCccCCCcccceEEEEec
Confidence 9999 68999999999999999843
No 95
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.96 E-value=1.2e-25 Score=226.57 Aligned_cols=401 Identities=22% Similarity=0.249 Sum_probs=224.7
Q ss_pred EECcEEEcCCCc---eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeecccccccccccccc--CC-CCChhhHH--
Q 009282 57 IKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--MG-SETIDDFF-- 128 (538)
Q Consensus 57 i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~--~~-~~~~~~~~-- 128 (538)
|+|++|+++... .+++|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+.... .+ ...||+..
T Consensus 1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~---~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~~~~ 77 (541)
T cd01304 1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA---KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDHRRD 77 (541)
T ss_pred CEEEEEEcCCCcccccccEEEEECCEEEEEccCC---CCCeEEECCCCEEECCeeeeeeCccccccccccccChhhhhcc
Confidence 578999997643 5789999999999998743 2468999999999999999999997651 11 12222221
Q ss_pred --------------------HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee----------e
Q 009282 129 --------------------SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI----------T 178 (538)
Q Consensus 129 --------------------~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 178 (538)
.....+.+-|.||++++..++.. .+. .-.+......++-+...-. .
T Consensus 78 ~~~~~~~~~~~~g~~~pst~~tgy~ya~mGytt~~e~a~~p~~-a~h---~h~e~~~~p~~d~~~~~~~gnn~~~~~~~~ 153 (541)
T cd01304 78 PVPKGALRRAGVGFSVPSTLATGYRYAEMGYTTAFEAAMPPLN-ARH---THEEMADTPILDKGAYPLLGNNWFVLEYLR 153 (541)
T ss_pred ccccccccccCCCccCCCchHhhhHHHhcCcceeecccCCccc-chh---hhHHhccCccccccceEEecchHHHHHHHh
Confidence 11245677899999988766543 111 1222222223332221111 1
Q ss_pred cCChh-hHHHHHHHHHHcCCcEEEEEeeeCC------------------CccCC-HHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 179 KWDEV-VSDEMEVMVKEKGINSFKFFMAYKG------------------SFMIN-DELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 179 ~~~~~-~~~~~~~~~~~~g~~~ik~~~~~~~------------------~~~~~-~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
..+.+ ..+.+..+++....-++|+. ++.| .+..+ .+.++.+.++..++|++..+|....
T Consensus 154 ~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~iH~h~n 232 (541)
T cd01304 154 DGDMEKLAAYVAWTLKASKGYGIKVV-NPGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHSIHVHCN 232 (541)
T ss_pred cCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceEEEEccc
Confidence 11222 22333344444455667764 2221 12333 5666777888889998777776422
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCC-----CEEEEecc---C--------HHHHHHHHH
Q 009282 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT-----PLYVVHVM---S--------MDAMEEIAK 302 (538)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~-----~~~~~h~~---~--------~~~~~~i~~ 302 (538)
+ .|..+ . .+...+.+++++.... .+|++|+. . .+..+.+..
T Consensus 233 n-----------lg~pg----------n--~~~t~~t~~~~~~~~~~~~~~~~h~tH~qfhsyg~~~~~~~~s~a~~i~~ 289 (541)
T cd01304 233 N-----------LGVPG----------N--YETTLETMKAAEGVKPDPRRQVLHLTHVQFHSYGGTSWRDFESGAERIAD 289 (541)
T ss_pred c-----------CCCCC----------c--HHHHHHHHHHhhcCCCccccceeEeeeeeEEeeccCCcccHhHHHHHHHH
Confidence 1 12211 1 2334555565555543 47888874 1 122355555
Q ss_pred HHHcCCcEEEeccccccc----cCc---------------ccccCCCccccccee---ecCCCCCccc----HHHHHHHH
Q 009282 303 ARKAGQRVIGEPVVSGLV----LDD---------------SWLWHSDFVTAAKYV---MSPPIRASGH----NKALQAAL 356 (538)
Q Consensus 303 ~~~~g~~v~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~---~~p~~r~~~~----~~~l~~~l 356 (538)
....+-.|+.+.....+- +.. ....+.....|.+.. +.+......- -..+..++
T Consensus 290 ~~n~~~~it~D~G~v~f~~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~Gvvp~~y~~k~~v~~lqwaiglEl~ll~ 369 (541)
T cd01304 290 YVNANDHVTIDVGQVIFGETTTMTGDGPMQFDLHGLTGLKWVNCDIELETGSGVVPFIYSPKNPVNALQWAIGLELFLLI 369 (541)
T ss_pred HHHcCCCEEEEeCceecCCcEEEEccchhhcccccccCCceeeeeeEeccCCceEEeEecCCCCchHHHHHHHHHHHHHh
Confidence 666676677666543110 000 000011111222211 1111000000 00123455
Q ss_pred hcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchh---hhHHHH--HHHhh--------hcCCCCHHHHHHHHhHhH
Q 009282 357 ATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIE---ERMHLV--WDTMV--------ESGQISVTDYVRLTSTEC 423 (538)
Q Consensus 357 ~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~---~~~~~~--~~~~~--------~~~~ls~~eal~~aT~~~ 423 (538)
+.--++.+.|||+.. .||..-|.-+.-+- .+...+ ....+ -...+|++++++++|.||
T Consensus 370 ~dp~~~~~tTDhPn~---------gpf~~YP~~i~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~reLSLeei~~mtT~nP 440 (541)
T cd01304 370 DDPWKVILTTDHPNG---------GPFTRYPRIIAWLMSKKFRAEEIATLHKWAQDRSALPGIDREYSLYEIAIMTRAGP 440 (541)
T ss_pred CCcceEEeecCCCCC---------CCcccHHHHHHHHhCHHHHHHHHHhcCHHHHhhccccCCCCCCCHHHHHHHHHHHH
Confidence 667789999998744 23432221110000 000000 00000 022379999999999999
Q ss_pred HHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceE
Q 009282 424 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKY 503 (538)
Q Consensus 424 A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~ 503 (538)
|++||++ +.|+|++|+.|||+|+|.++. .+.++++.+ . ....++|.+||++|++|+++|+++... .|+.
T Consensus 441 AKiLGL~-~kG~L~~G~~ADLvIfD~n~~-~v~~~dl~s-----~---~~~~gkV~~Tiv~GkvVv~dGeiv~~~-~G~~ 509 (541)
T cd01304 441 AKLLGLS-DKGHLGVGADADIAIYDDDPD-QVDPSDYEK-----V---EKAFSRAAYVLKDGEIVVKDGEVVAEP-WGRT 509 (541)
T ss_pred HHHhCCC-CCCccCCCCcCCEEEEeCCcC-ccCchhhcC-----c---eeecCcEEEEEECCEEEEECCEEccCC-CCcE
Confidence 9999994 579999999999999998876 444333221 1 233568999999999999999998754 5777
Q ss_pred eecCC
Q 009282 504 IEMRP 508 (538)
Q Consensus 504 ~~~~~ 508 (538)
+--.+
T Consensus 510 l~~~~ 514 (541)
T cd01304 510 YWVDV 514 (541)
T ss_pred EEEec
Confidence 66553
No 96
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1e-26 Score=212.77 Aligned_cols=344 Identities=18% Similarity=0.209 Sum_probs=207.8
Q ss_pred EEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC----C--CCChhhHHH
Q 009282 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----G--SETIDDFFS 129 (538)
Q Consensus 56 ~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~----~--~~~~~~~~~ 129 (538)
+|.|++|+..+.+.+++|+|+||+|..|.+.... ...-||++|.+++|||||.|+--...++ | +.....+..
T Consensus 2 ~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~--~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aAi~a 79 (377)
T COG3454 2 ILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP--LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIAAILA 79 (377)
T ss_pred ccccceEEeecceeeeeEEEecceEeeeccccCc--ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchHHHHH
Confidence 5899999999998889999999999999876532 2667999999999999999997554321 1 112222333
Q ss_pred HHHHHHhCCcEEEecccCCCCC--------CHHHHHHHHHHHh--cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 130 GQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKA--KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
.-...+.+||||++|...-++. ...+.++...+.. .....+..++..+.-...+.+..+.++........
T Consensus 80 hD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p~v~L 159 (377)
T COG3454 80 HDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHPRVKL 159 (377)
T ss_pred hhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCCCeeE
Confidence 3455689999999987432221 4556666666543 23456677777777777777888888875666677
Q ss_pred EEEEeeeCCC----------------ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 200 FKFFMAYKGS----------------FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 200 ik~~~~~~~~----------------~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
+.++-..+|. ..++++++.+.++.-...... ..........+.+.+.|+.-. .|.
T Consensus 160 iSlMDH~PGQrQf~~le~Y~~yy~~k~~~s~~e~~~~i~~r~a~~~~-----y~~~~r~~i~~~c~~rgI~lA-SHD--- 230 (377)
T COG3454 160 ISLMDHTPGQRQFANLEKYREYYQGKRGLSDEEFAEFIEERQALSAR-----YSDPNRQAIAALCRERGIALA-SHD--- 230 (377)
T ss_pred EEecCCCCCcchhhhHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHhh-----cccchHHHHHHHHHHcCCcee-cCC---
Confidence 7665544443 233444444443322111000 001111122222333333211 111
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCC
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 343 (538)
+++.+.+ +.....| +.+.-. +...+..+..++.|..|..... |.-.|.
T Consensus 231 --DaT~~hV----~es~~~G--v~iAEF--PtT~eAA~asr~~Gm~VlMGAP--------------NivrGg-------- 278 (377)
T COG3454 231 --DATVEHV----AESHGLG--VAIAEF--PTTVEAAKASRELGMQVLMGAP--------------NIVRGG-------- 278 (377)
T ss_pred --cCcHHHH----HHHHhcC--eeEEeC--ccHHHHHHHHHHhCchhhcCCC--------------ceeccC--------
Confidence 1111111 1122222 223222 2334666666777766542211 111100
Q ss_pred CCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhH
Q 009282 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 423 (538)
Q Consensus 344 r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~ 423 (538)
+.....+..++.+.|+.++++||+.|.+.- ...+...-....+++.||++++|.||
T Consensus 279 -SHsGNvsA~ela~~glLDiLsSDY~P~SLl-----------------------~A~F~La~~~~~~~lpqAvalvt~nP 334 (377)
T COG3454 279 -SHSGNVSARELAQHGLLDILSSDYVPASLL-----------------------HAAFRLADLGSNISLPQAVALVTKNP 334 (377)
T ss_pred -CcccchhHHHHHhCCceeeecccCCcHHHH-----------------------HHHHHHhhhhcccCHHHHHHHhccCH
Confidence 112235578899999999999998876422 22221111223358999999999999
Q ss_pred HHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEE
Q 009282 424 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 489 (538)
Q Consensus 424 A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~ 489 (538)
|+++|+ .++|+|+||++||||.+..+.. ...|+.||+.|+.|+
T Consensus 335 A~algl-~DRG~Ia~GlrADlv~v~~~~~----------------------vp~ir~vwr~G~rv~ 377 (377)
T COG3454 335 ARALGL-TDRGRIAPGLRADLVRVRRDGG----------------------VPVIRTVWRAGKRVA 377 (377)
T ss_pred HHhcCC-CcccccccccccceEEEecCCC----------------------CceeeeeeecceecC
Confidence 999999 4899999999999998875533 236899999999874
No 97
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.95 E-value=8.8e-28 Score=251.09 Aligned_cols=190 Identities=17% Similarity=0.139 Sum_probs=122.9
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
..++.+.+.++++.|+++|+++++|+.++..+...++.+ +++.......+.++.+.
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l~~~------------------------~~~~~~~g~~~~r~~i~ 345 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVLDAL------------------------EAALKDNPRADHRHRIE 345 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHHH------------------------HHHHHhcCCCCCCceee
Confidence 456899999999999999999999998776555444332 11111112235678899
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~ 369 (538)
|+...+. +.++++++.|+.++.+|.. ............+.. ..... ..+++.+++.|+++++|||++
T Consensus 346 H~~~~~~-~~~~~l~~~gv~~~~~P~~--~~~~~~~~~~~~lg~-~~~~~---------~~p~~~~~~~Gv~v~lGSD~~ 412 (479)
T cd01300 346 HAQLVSP-DDIPRFAKLGVIASVQPNH--LYSDGDAAEDRRLGE-ERAKR---------SYPFRSLLDAGVPVALGSDAP 412 (479)
T ss_pred ecccCCH-HHHHHHHHcCCceEeCccc--ccCchHHHHHhcccH-HHHhc---------CchHHHHHHCCCeeeccCCCC
Confidence 9998886 8999999999887766653 222211111000000 01111 234789999999999999976
Q ss_pred CCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
..+. ++|..++.++.+....... ......++|++++|+++|.|||+++|+++++|+|++||.|||||
T Consensus 413 ~~~~-------~p~~~~~~av~~~~~~~~~---~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 413 VAPP-------DPLLGIWAAVTRKTPGGGV---LGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred CCCC-------CHHHHHHHHheeeCCCCCC---CCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 4421 1332222111110000000 00133469999999999999999999988999999999999986
No 98
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=5.2e-26 Score=226.52 Aligned_cols=295 Identities=18% Similarity=0.186 Sum_probs=185.9
Q ss_pred eEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC
Q 009282 72 DVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING 151 (538)
Q Consensus 72 ~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~ 151 (538)
+|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+ +....+ ...+.+++.||||++|+......
T Consensus 1 ~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~---~~~~~a~~~GvTtvvd~~~~~~~ 75 (338)
T cd01307 1 DVAIENGKIAAVGAALAAPAATQIVDAGGCYVSPGWIDLHVHVYQG--GTRYGD---RPDMIGVKSGVTTVVDAGSAGAD 75 (338)
T ss_pred CEEEECCEEEEccCCCCCCCCCeEEECCCCEEecCeEEeeecCCCC--CcccCC---CHhHHHHcCceeEEEeCCCCCCC
Confidence 5899999999999865433457899999999999999999999876 432222 35778899999999999754443
Q ss_pred CHHHHHHHHHHHhc---ccceeeeeeeeeec--CC---hhhHHHHHHHHH--HcCCcEEEEEeeeCCCccCCHHHHHHHH
Q 009282 152 SLTAGFEAYEKKAK---NSCMDYGFHMAITK--WD---EVVSDEMEVMVK--EKGINSFKFFMAYKGSFMINDELLIEGF 221 (538)
Q Consensus 152 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~--~~g~~~ik~~~~~~~~~~~~~~~l~~~~ 221 (538)
......+...+... ..++++++++.... .. ....+.+.+... ..|..++|.++...+......+.++..+
T Consensus 76 ~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~~~~~~~l~~~~ 155 (338)
T cd01307 76 NIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVGEWGIKPLELAK 155 (338)
T ss_pred CHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeecccccccCCcHHHHHH
Confidence 33333444432332 24555554432211 11 111223333332 3588888988765443333445588999
Q ss_pred HHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHH----
Q 009282 222 KRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA---- 296 (538)
Q Consensus 222 ~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~---- 296 (538)
+.|++.|+++.+|+.+... ..+.+ .. . .....+.|+.....
T Consensus 156 ~~a~~~~~pi~vH~~~~~~~~~~~~----------------------------~~---l---~~g~~~~H~~~g~~~~~~ 201 (338)
T cd01307 156 KIAKEADLPLMVHIGSPPPILDEVV----------------------------PL---L---RRGDVLTHCFNGKPNGIV 201 (338)
T ss_pred HHHHHcCCCEEEEeCCCCCCHHHHH----------------------------HH---h---cCCCEEEeccCCCCCCCC
Confidence 9999999999999965432 11111 11 1 11124667765432
Q ss_pred ------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC-ceEEeCCCC
Q 009282 297 ------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHC 369 (538)
Q Consensus 297 ------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv-~~~lgtD~~ 369 (538)
.+.+..+.++|+.+..+... ..+ ....+..+++.|+ +..++||..
T Consensus 202 ~~~~~~~~~~~~~~~~G~~~d~~~G~------------------~~~----------~~~~~~~l~~~G~~~~~lstD~~ 253 (338)
T cd01307 202 DEEGEVLPLVRRARERGVIFDVGHGT------------------ASF----------SFRVARAAIAAGLLPDTISSDIH 253 (338)
T ss_pred CCCCcHHHHHHHHHhCCEEEEeCCCC------------------Cch----------hHHHHHHHHHCCCCCeeecCCcc
Confidence 24566677787654311000 000 0122456778887 568999964
Q ss_pred CCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcC
Q 009282 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 449 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~ 449 (538)
.... . .+....+...++.+.. .+++++++++++|.|||++|++ +++|+|++|+.|||++++.
T Consensus 254 ~~~~---------~-------~~p~~~l~~~l~~l~~-~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~ 315 (338)
T cd01307 254 GRNR---------T-------NGPVYALATTLSKLLA-LGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDL 315 (338)
T ss_pred ccCC---------C-------CCccccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeC
Confidence 2110 0 0112223444444433 4699999999999999999999 6799999999999999986
Q ss_pred CC
Q 009282 450 NS 451 (538)
Q Consensus 450 ~~ 451 (538)
+.
T Consensus 316 ~~ 317 (338)
T cd01307 316 KD 317 (338)
T ss_pred CC
Confidence 53
No 99
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.95 E-value=3.6e-25 Score=224.42 Aligned_cols=398 Identities=22% Similarity=0.228 Sum_probs=215.4
Q ss_pred EEEECcEEEcCCCc---eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc--cCC-CCChhhHH
Q 009282 55 ILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMG-SETIDDFF 128 (538)
Q Consensus 55 ~~i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~--~~~-~~~~~~~~ 128 (538)
++|+|++|+++... +.++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+..+ +.+ ...++++.
T Consensus 2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~--~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE~~~ 79 (556)
T TIGR03121 2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT--KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPEDHR 79 (556)
T ss_pred EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC--CCCeEEECCCCEEEeCEEeeeECCCccccccccccCHHHHh
Confidence 68999999998643 35899999999999986533 246899999999999999999999874 111 12233332
Q ss_pred H----------------------HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee---------
Q 009282 129 S----------------------GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI--------- 177 (538)
Q Consensus 129 ~----------------------~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 177 (538)
. ....+++.|+||++|+..++.. .+.. -.+......++-+...-.
T Consensus 80 ~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~~-arh~---h~e~~~~p~~d~~~~~~~gnn~~~~~~ 155 (556)
T TIGR03121 80 RDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPLN-ARHT---HEEFADTPILDKGGYTLLGNNWFLLEY 155 (556)
T ss_pred hcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCccc-hhhh---HHHhccCccccccceEEecchHHHHHH
Confidence 1 2245678999999998766543 1222 222222222332221111
Q ss_pred -ecCChh-hHHHHHHHHHHcCCcEEEEEeeeCC------------------CccCC-HHHHHHHHHHHHhcCCe--EEEE
Q 009282 178 -TKWDEV-VSDEMEVMVKEKGINSFKFFMAYKG------------------SFMIN-DELLIEGFKRCKSLGAL--AMVH 234 (538)
Q Consensus 178 -~~~~~~-~~~~~~~~~~~~g~~~ik~~~~~~~------------------~~~~~-~~~l~~~~~~A~~~g~~--v~~H 234 (538)
...+.+ ....+..+++....-++|+. ++.| .+..+ .+.++.+.++..++|+| +++|
T Consensus 156 ~~~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~i~~~l~~~~e~l~lph~~h~H 234 (556)
T TIGR03121 156 LKDGEPEKAAAYVAWLLKATKGYGIKVV-NPGGVEAWGWGENVLSLDDPVPYFGITPREIIKGLARANEELGLPHSIHVH 234 (556)
T ss_pred HhcCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEe
Confidence 111222 22333344444455667764 2221 12334 46666777778888986 5555
Q ss_pred cCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCC------EEEEeccC-----------HHHH
Q 009282 235 AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP------LYVVHVMS-----------MDAM 297 (538)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~------~~~~h~~~-----------~~~~ 297 (538)
+.+. |..+ .. +...+.++..+ |.+ +|++|... .+..
T Consensus 235 ~nnl-------------g~pg----------n~--~~t~~t~~~~~--g~~~~~~~~~h~tH~qf~syg~~~~~~f~s~a 287 (556)
T TIGR03121 235 CNNL-------------GVPG----------NY--ETTLDTLDAAE--GVKPNRNQVLHLTHVQFHSYGGTSWRDFESGA 287 (556)
T ss_pred cCCC-------------CCCC----------ch--HHHHHHHHHhc--CCCCCccceeEeeeeeeeccCCCCCCCcchhH
Confidence 5442 2221 11 11222233222 333 67777631 1112
Q ss_pred HHHHHHHHcCCcEEEecccccc----ccC---------------cccccCCCcccccce---eecCCCCCcccHH----H
Q 009282 298 EEIAKARKAGQRVIGEPVVSGL----VLD---------------DSWLWHSDFVTAAKY---VMSPPIRASGHNK----A 351 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~---~~~p~~r~~~~~~----~ 351 (538)
+.+...-..+-.|+.+...-.+ .+. +....+...+.++++ .+.+......-+= .
T Consensus 288 ~~~a~~vn~~~~~t~d~Gqv~fg~t~tmt~d~~~~~~~~~~~~~kw~~~d~e~e~g~gvvp~~y~~~~~v~~~qwaigle 367 (556)
T TIGR03121 288 EKIADYVNANPNVTIDVGQVTFGETTTMTADGPMEYDLHKLTGLKWANKDVELETGSGVVPFKYSPKNPVHALQWAIGLE 367 (556)
T ss_pred HHHHHHHhcCCCEEEEeCceecCCceEEeccchhhhhcccCCCCceeeeeeecccCCceEEeeecCCCcchHHHHHHhhH
Confidence 3343444444445544432111 000 000011111122111 1111110000011 1
Q ss_pred HHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhh--hHHHHH---HHhh--------hcCCCCHHHHHHH
Q 009282 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE--RMHLVW---DTMV--------ESGQISVTDYVRL 418 (538)
Q Consensus 352 l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~--~~~~~~---~~~~--------~~~~ls~~eal~~ 418 (538)
+..+.+.--++.+.|||+.. +||..-|.=+.-+-. .....+ .+.+ -...+|++|++++
T Consensus 368 l~Ll~~dp~~~~~ttDhPng---------gpf~~YP~ii~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~Re~sL~EI~~m 438 (556)
T TIGR03121 368 LFLLIKDPWRVFLTTDHPNG---------GPFTRYPRIIALLMSRKYREDMLSTVHPWAAARSTLGGIDREYSLYEIAIM 438 (556)
T ss_pred HHHhcCCcceeEEeccCCCC---------CcccchHHHHHHHcCHHHHHHHHHhcCHHHHhhcccccccCCCCHHHHHHH
Confidence 22344567789999998744 355433321111000 000111 0000 1345999999999
Q ss_pred HhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 419 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 419 aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
+|.+||++||+. ++|+|++|+.|||+|+|.++....+ ....+.. ....+.+||++|++|+++|+++...
T Consensus 439 tTanPAkaLGL~-dkG~L~pGa~ADIaI~D~~~~~~~~--------~~~~v~~--~~~~v~~Tik~G~vV~~dGei~~~~ 507 (556)
T TIGR03121 439 TRAGPAKLLGLT-DRGHLGVGADADIAVYDINPDDVDT--------DYADVEK--AFSTALYVFKDGEIVVKDGEIVETP 507 (556)
T ss_pred HHHHHHHHhCCC-CCCCcCCCCcCCEEEEeCcccccCC--------chHHHhh--ccCCccEEEECCEEEEECCEEccCC
Confidence 999999999994 5799999999999999976543211 0111111 1356899999999999999999876
Q ss_pred CCceEeecC
Q 009282 499 GSGKYIEMR 507 (538)
Q Consensus 499 ~~~~~~~~~ 507 (538)
.|+.+--+
T Consensus 508 -~G~~~~~~ 515 (556)
T TIGR03121 508 -WGRTYWVD 515 (556)
T ss_pred -CCcEEEEe
Confidence 67776543
No 100
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=99.95 E-value=8.4e-26 Score=222.60 Aligned_cols=326 Identities=14% Similarity=0.130 Sum_probs=240.1
Q ss_pred eeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-cc--ceeeeeeeee
Q 009282 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NS--CMDYGFHMAI 177 (538)
Q Consensus 102 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 177 (538)
+.+|-=-|+|+|+-+. .+.....-+...|||++++|....+. ...+.++....... .. .+++.+++..
T Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v 73 (341)
T TIGR00856 2 LTIRRPDDWHLHLRDG--------AMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTL 73 (341)
T ss_pred ceecCccceeeeccCc--------hHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEE
Confidence 4567778999999876 33333445677889999998654333 23445555444433 33 3578877777
Q ss_pred ecCChhhHHHHHHHHHHcCCcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcC
Q 009282 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELG 252 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~~~~g 252 (538)
.........++..+.+..|+.++|+|.... +....+...+.++++.+++.|+++.+|+++.. ....
T Consensus 74 ~~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~--------- 144 (341)
T TIGR00856 74 YLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDI--------- 144 (341)
T ss_pred ECCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCccc---------
Confidence 555544567888877445999999986422 11223458899999999999999999998752 1100
Q ss_pred CCCcccccccCCchHHHHHHH-HHHHHHH-HcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 253 ITGPEGHALSRPPLLEGEATT-RAIRLAE-FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~-~~l~~~~-~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
...+...+. .+..++. ..+.++++.|+++...++.+.+.+. .|++++++||+.++++.+....
T Consensus 145 ------------~~~e~~a~~~~i~~lA~~~~~~~~~i~H~st~~~~~~i~~a~~---~vt~E~~ph~L~l~~~~~~~~~ 209 (341)
T TIGR00856 145 ------------FDREARFIESVLEPLRQRFPALKVVLEHITTKDAIDYVEDGNN---RLAATITPQHLMFTRNDLLGGG 209 (341)
T ss_pred ------------ccchhhhhHHHHHHHHHHccCCeEEEEecCcHHHHHHHHHcCC---CEEEEEcHHHHhccHHHHhccC
Confidence 000122233 3334554 4589999999999888777765533 3999999999999998764311
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCC
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ 409 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ 409 (538)
.+..++++||+|..++++++|+++..|... .++|||+|++...|.. + .+++|++|++..++..+. .++. +
T Consensus 210 --~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~---~--~~~~G~~g~e~~l~~~~~-~~~~-~ 280 (341)
T TIGR00856 210 --VNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKES---S--CGCAGCFSAPTALPSYAE-VFEE-M 280 (341)
T ss_pred --CCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC---C--CCCCCcccHHHHHHHHHH-HHhc-C
Confidence 246799999999999999999999999999 6999999999877742 2 478999999999998773 4444 6
Q ss_pred CCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccC-CeEEeeEE
Q 009282 410 ISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYE-GRRVKGKV 478 (538)
Q Consensus 410 ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v 478 (538)
++++++++..+.|||+++|+ +. | .|||+|+ +..+.++.+++.++..|+||+ |..+..+|
T Consensus 281 ~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~--~~~~~i~~~~~~s~~~~sp~~~~~~~~~~v 340 (341)
T TIGR00856 281 NALENLEAFCSDNGPQFYGL-PV-N------STKIELV--KKEQQIPESIALTDDTLVPFRAGETLSWSV 340 (341)
T ss_pred CCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEE--eccEEeCchhccCCCCcccccCCcccceee
Confidence 99999999999999999999 43 4 8999999 578999999999999999995 44433333
No 101
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.94 E-value=8.6e-25 Score=220.30 Aligned_cols=334 Identities=21% Similarity=0.230 Sum_probs=185.0
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCC-CeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G-~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
+++|+|++|+++. ..+|+|+||||++|++....+ +.++||++| ++|+|||||+|+|+..+ +....++. ..
T Consensus 2 ~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~~-~~~~iD~~g~~~l~PG~ID~H~H~~~~--~~~~~~~~---~~ 72 (365)
T TIGR03583 2 DLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITGS-AKQTIDLEGETYVSAGWIDDHTHCFPK--SALYYDEP---DE 72 (365)
T ss_pred cEEEECcEEecCC---eeEEEEECCEEEEecCCCCCC-CCeEEECCCCeEEecCEEEeeeccCCC--cccccCCH---hH
Confidence 5899999999863 459999999999998754322 468999999 99999999999999754 22223333 23
Q ss_pred HHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc-cc--ceeeeeeeeeec-----CChhhHHHHHHHHHHc--CCcEEEE
Q 009282 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NS--CMDYGFHMAITK-----WDEVVSDEMEVMVKEK--GINSFKF 202 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--g~~~ik~ 202 (538)
.++++|||+++++............+.. +... +. .++....+..+. ......++++++.... +..++|.
T Consensus 73 ~a~~~GvTt~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv~~~~ 151 (365)
T TIGR03583 73 IGVKTGVTTVVDAGSTGADDIDDFYRLA-QQAKTNVFALLNISRIGLVAQDELADLSNLDASAVKQAVERYPDFIVGLKA 151 (365)
T ss_pred hhhcCceeEEEeCCCCCCCCHHHHHHHH-HhhCCcEEEEeeehhccccChhhhhChHHhHHHHHHHHHHhCcCcEEEEEE
Confidence 4688999999987542222233333322 2222 21 121111111111 1122344455444222 2455566
Q ss_pred EeeeC--CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 203 FMAYK--GSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 203 ~~~~~--~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
+++.. +....+...+.+.+..+ +.++++.+|+.+... ..+..+. ...
T Consensus 152 ~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~~~i~~~-~~~---------------------------- 201 (365)
T TIGR03583 152 RMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPELDEILAL-MEK---------------------------- 201 (365)
T ss_pred eecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCHHHHHHH-hcC----------------------------
Confidence 66532 12223355555555544 789999999976532 2222211 111
Q ss_pred HHcCCCEEEEeccCHHH----------HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccH
Q 009282 280 EFVNTPLYVVHVMSMDA----------MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (538)
Q Consensus 280 ~~~~~~~~~~h~~~~~~----------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 349 (538)
+ . .+.|+.+... .+.+......|+.+... |+.. .+ ..
T Consensus 202 ---g-~-~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~---hg~~---------------~~----------~~ 248 (365)
T TIGR03583 202 ---G-D-VLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVG---HGTA---------------SF----------SF 248 (365)
T ss_pred ---C-C-eeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeC---CCCC---------------Cc----------hH
Confidence 1 1 3566543321 13333344455433221 0000 00 00
Q ss_pred HHHHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 350 KALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 350 ~~l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.....+...++ .++.++|... ....++....+...+++++.. |++++++++++|.|||++||
T Consensus 249 ~~~~~~~~~~~~~~td~~d~~~----------------~~~~~gp~~~l~~~~~~~~~~-g~~~~ea~~~~t~npa~~~g 311 (365)
T TIGR03583 249 HVAEKAKRAGIFPDTISTDIYI----------------RNRINGPVYSLATVMSKFLAL-GYSLEEVIEKVTKNAAEILK 311 (365)
T ss_pred HHHHHHHhCCCCCccccccccc----------------CCCccCccccHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhC
Confidence 11223333342 2333444210 011233334466666666654 69999999999999999999
Q ss_pred CCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEe----eEEEEEEECCEEE
Q 009282 429 VYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVK----GKVEVTIAGGRVV 488 (538)
Q Consensus 429 ~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~V~v~G~~V 488 (538)
++ +.|+|++|+.|||++||.+..... +. -..|.... -.++.|+++|+..
T Consensus 312 l~-~~g~i~~g~~ad~~~~~~~~~~~~----~~------~~~g~~~~~~~~~~~~~~~~~~~~~ 364 (365)
T TIGR03583 312 LT-QKGRLQEGYDADLTIFTVKAEPKK----LT------DSEGDSRIAEEQIKPLAVIIGGEYY 364 (365)
T ss_pred CC-CCCCcCCCCcccEEEEecCCCCce----ee------cCCCCEEEeccccceEEEEECCEEe
Confidence 95 479999999999999997543211 11 12222222 2467889999864
No 102
>PRK05451 dihydroorotase; Provisional
Probab=99.94 E-value=1.4e-24 Score=215.20 Aligned_cols=324 Identities=16% Similarity=0.163 Sum_probs=226.0
Q ss_pred eeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-c--cceeeeeeeee
Q 009282 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-N--SCMDYGFHMAI 177 (538)
Q Consensus 102 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (538)
+-+|=-||+|+|+-.. .+..++ ....++++|++++|....+. ...+.++....... . ..+++.++...
T Consensus 5 ~~~~~~~d~h~hl~~~----~~~~~~----~~~~~~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i 76 (345)
T PRK05451 5 LTIRRPDDWHLHLRDG----AMLKAV----VPYTARQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTL 76 (345)
T ss_pred EEecCcceEEEecCCc----hHHHHH----HHHHHHhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEE
Confidence 4467889999999753 222233 33445779999998643222 23444444444332 2 22455555555
Q ss_pred ecCChhhHHHHHHHHHHcC-CcEEEEEeeeCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009282 178 TKWDEVVSDEMEVMVKEKG-INSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
.....+..+++.++. +.| ..++|+|..+.+ ....+.+.+.++++.+.++|+++.+|+++........
T Consensus 77 ~~~~~~~~~El~~~~-~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~------- 148 (345)
T PRK05451 77 YLTDNTDPDELERAK-ASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIF------- 148 (345)
T ss_pred EeCCCCCHHHHHHHH-HCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCcccccc-------
Confidence 443334467787776 779 459999976421 1123678899999999999999999998743200000
Q ss_pred CCCcccccccCCchHHHHHHHHH-HHHHHHc-CCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 253 ITGPEGHALSRPPLLEGEATTRA-IRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~-l~~~~~~-~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
..+...+.+. ..++... +.++++.|+++...++.+++ .+..|++++|+|||.++++.+...+
T Consensus 149 -------------~~e~~~~~~~l~~lA~~~pg~~lhI~Hlst~~~~e~i~~---a~~~it~Et~ph~L~l~~~~~~~~~ 212 (345)
T PRK05451 149 -------------DREAVFIDRVLEPLRRRFPKLKIVFEHITTKDAVDYVRE---ANDNLAATITPHHLLINRNDMLVGG 212 (345)
T ss_pred -------------cchHHHHHHHHHHHHHhcCCCcEEEEecCcHHHHHHHHh---cCCCEEEEecHHHHhcCHHHHhCCC
Confidence 0012334343 4477566 99999999999776665543 3678999999999999988764322
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhh---hHHHHHHHhhh
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE---RMHLVWDTMVE 406 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~---~~~~~~~~~~~ 406 (538)
.+..++++||+|...+++++|+++..|... +++|||+|++..+|. .++|.+|++. .++.... ++.
T Consensus 213 --~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~--------~~~G~~gi~~~~~g~~~~~~-~~~ 281 (345)
T PRK05451 213 --IRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKE--------SACGCAGIFSAPAALELYAE-VFE 281 (345)
T ss_pred --cCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhC--------CCCCCCchhhHHHHHHHHHH-HHH
Confidence 236689999999999999999999999999 899999999987764 2345445444 3344443 233
Q ss_pred cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccC-CeEEeeEEE
Q 009282 407 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYE-GRRVKGKVE 479 (538)
Q Consensus 407 ~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ 479 (538)
.+ .+++++++..+.|||++||+..++|+|.+| +..|.++.+.+.++..++||+ |..+..+|+
T Consensus 282 ~~-~~l~~~v~~~s~nPAkifGl~~~KG~i~~~----------~~~~~v~~~~~~s~~~~sp~~~~~~~~~~~~ 344 (345)
T PRK05451 282 EA-GALDKLEAFASLNGPDFYGLPRNTDTITLV----------REPWTVPESIPFGDETVVPFRAGETLRWSVK 344 (345)
T ss_pred cC-CCHHHHHHHHhHHHHHHhCCCCCCCeEEEE----------ecceecCcccccCCCceeeecCCceeeeEec
Confidence 44 499999999999999999998889999887 678899988999999999994 555555543
No 103
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.93 E-value=4.7e-24 Score=218.20 Aligned_cols=282 Identities=22% Similarity=0.258 Sum_probs=183.4
Q ss_pred ecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCC-CCCCHHHHHHHHHHHhcccceeeeeee
Q 009282 97 DATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHM 175 (538)
Q Consensus 97 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
|++|++|+|||||+|+|+..+ + .+++. ..+.++.+||||++++... ......+.++...+...+..+++.+..
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~--~-~~~~~---~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~~~p~~~~~~~ 74 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESS--M-LTPSE---FAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAKKTPLDIFWML 74 (422)
T ss_pred CCCCCEEccCEEEccCCcCCC--C-CChHH---HHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHhCCCceEEEeC
Confidence 789999999999999999876 2 23433 3778999999999986422 222455666666665555555554333
Q ss_pred ee----ecC--Chh--hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 176 AI----TKW--DEV--VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 176 ~~----~~~--~~~--~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
+. +.. ++. ..++++++.+..++.+++.++++++. ..+.+.+.+.++.|+++|+++.+|+..... ..+..
T Consensus 75 p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~~--~~L~a 151 (422)
T cd01295 75 PSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPGV-IEGDDEMLAKIQAAKKAGKPVDGHAPGLSG--EELNA 151 (422)
T ss_pred CCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCccc-cCCcHHHHHHHHHHHhCCCEEEEeCCCCCH--HHHHH
Confidence 22 111 112 36778777755689999988887653 336778999999999999999999976542 22222
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccccc
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (538)
+.+.|.. ..|.....+ +.++++ +.|+.+...+...
T Consensus 152 ~l~aGi~---------------------------------~dH~~~~~e-ea~e~l-~~G~~i~i~~g~~---------- 186 (422)
T cd01295 152 YMAAGIS---------------------------------TDHEAMTGE-EALEKL-RLGMYVMLREGSI---------- 186 (422)
T ss_pred HHHcCCC---------------------------------CCcCCCcHH-HHHHHH-HCCCEEEEECccc----------
Confidence 2222321 236555443 555554 6887765442210
Q ss_pred CCCcccccceeecCCCCCcccHHHHHHHHh--cCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh
Q 009282 328 HSDFVTAAKYVMSPPIRASGHNKALQAALA--TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (538)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~--~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~ 405 (538)
..+...+...+. .+.+++++||....++.. . ...+....+...
T Consensus 187 ------------------~~~~~~~~~~l~~~~~~~i~l~TD~~~~~~~~-----------~------~g~~~~v~r~a~ 231 (422)
T cd01295 187 ------------------AKNLEALLPAITEKNFRRFMFCTDDVHPDDLL-----------S------EGHLDYIVRRAI 231 (422)
T ss_pred ------------------HhhHHHHHHhhhhccCCeEEEEcCCCCchhhh-----------h------cchHHHHHHHHH
Confidence 000111222222 478999999974221110 0 012223333333
Q ss_pred hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 406 ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 406 ~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
.. ++++++|++++|.|||+++|+ +++|+|+||+.|||++++... ..+|..||++|
T Consensus 232 ~~-g~s~~eal~~aT~n~A~~~gl-~~~G~i~~G~~AD~vv~~~~~-----------------------~~~v~~v~~~G 286 (422)
T cd01295 232 EA-GIPPEDAIQMATINPAECYGL-HDLGAIAPGRIADIVILDDLE-----------------------NFNITTVLAKG 286 (422)
T ss_pred Hc-CCCHHHHHHHHhHHHHHHcCC-CCCcccCCCCcCCEEEECCCC-----------------------CCceEEEEECC
Confidence 44 599999999999999999999 778999999999999998311 23689999999
Q ss_pred EEEEECC
Q 009282 486 RVVWEND 492 (538)
Q Consensus 486 ~~V~~~~ 492 (538)
+.||+.-
T Consensus 287 ~~v~~r~ 293 (422)
T cd01295 287 IAVVERH 293 (422)
T ss_pred eEEEEec
Confidence 9999864
No 104
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.93 E-value=4e-24 Score=200.32 Aligned_cols=356 Identities=17% Similarity=0.205 Sum_probs=223.5
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC----------CCCceEEecCCCeeeccccccccccccccCCC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~----------~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~ 121 (538)
..|++|+|+.|+|-.++..+||-|+||||.+||..... .+++++|.++|++|+.|-||+|+|+..+
T Consensus 66 ~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P---- 141 (568)
T COG0804 66 ALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP---- 141 (568)
T ss_pred cccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH----
Confidence 46899999999999999999999999999999873321 2368899999999999999999999876
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC--------CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (538)
+....++++||||++.-+..+.. ...-.+....+.....++++++..-..... ...+.+..
T Consensus 142 -------qqi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~~p~N~g~lgKGn~s~---~~~L~Eqi- 210 (568)
T COG0804 142 -------QQIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADGLPMNIGFLGKGNASN---PAPLAEQI- 210 (568)
T ss_pred -------HHHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhhcCceeeEEeecCCCCC---chhHHHHH-
Confidence 23677899999999955432221 345556666667777888988876443332 33455556
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
+.|+.++|+--+ +..++..+...+..|.+++.++.+|..+.++.....+.+
T Consensus 211 ~aGa~GlKlHED----WG~TpaaI~~~L~VAD~~DvqVaiHtDTLNEsGfvEdTi------------------------- 261 (568)
T COG0804 211 EAGAIGLKLHED----WGATPAAIDTCLSVADEYDVQVAIHTDTLNESGFVEDTI------------------------- 261 (568)
T ss_pred hhccceeEeecc----cCCCHHHHHHHHhhhhhhceEEEEeecccccccchHhHH-------------------------
Confidence 779999998655 456899999999999999999999996654422121111
Q ss_pred HHHHHHHHcCCCEEEEeccCHH---HHHHHHHHHHcCC-cEEEeccccc---------------cccCcccccCCCcccc
Q 009282 274 RAIRLAEFVNTPLYVVHVMSMD---AMEEIAKARKAGQ-RVIGEPVVSG---------------LVLDDSWLWHSDFVTA 334 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~~~---~~~~i~~~~~~g~-~v~~~~~~~~---------------~~~~~~~~~~~~~~~~ 334 (538)
+...|.-+|..|...+. ..+.++.....++ +-+..|...+ .++++..-++..|.
T Consensus 262 -----~A~~gRtIHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFA-- 334 (568)
T COG0804 262 -----AAIKGRTIHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFA-- 334 (568)
T ss_pred -----HHhcCceeEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhh--
Confidence 12234445556654321 2133433333322 1111111100 01222222221221
Q ss_pred cceeecCCCCCcccHHHHHH-HHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh-hc---CC
Q 009282 335 AKYVMSPPIRASGHNKALQA-ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV-ES---GQ 409 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~-~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~---~~ 409 (538)
..|.+.+..+..+ +++-|+.-.++||+.....-.. ...++|.. ...+......+- +. ..
T Consensus 335 -------eSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGE-----vi~RtwQt----A~kmK~qrG~L~~d~~~nDN 398 (568)
T COG0804 335 -------ESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGE-----VITRTWQT----ADKMKKQRGALPEDAGGNDN 398 (568)
T ss_pred -------hhccchhhhhHHHHHhhccceEEeccchHhhhccch-----hhhhHHHH----HHHHHHhcCCCCCCCCCCcc
Confidence 1222223333343 5566999999999765543321 11111110 000000000000 01 11
Q ss_pred CCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEE
Q 009282 410 ISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 489 (538)
Q Consensus 410 ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~ 489 (538)
+-....+...|+|||-..|+++.+||+|+||.||||+|++..+ .-++..|+++|-+.+
T Consensus 399 ~RvkRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~PaFF----------------------GvKP~~vlkgG~ia~ 456 (568)
T COG0804 399 FRVKRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPAFF----------------------GVKPELVLKGGMIAW 456 (568)
T ss_pred HHHhhhhhheecCHHHhcccchhccceeccceeeeeeechhhc----------------------CCCcceEEecceeee
Confidence 2334567889999999999999999999999999999996543 347899999999887
Q ss_pred EC-Ceeec
Q 009282 490 EN-DELNV 496 (538)
Q Consensus 490 ~~-~~~~~ 496 (538)
-. |....
T Consensus 457 a~mGD~Na 464 (568)
T COG0804 457 AQMGDPNA 464 (568)
T ss_pred eccCCCCC
Confidence 65 44443
No 105
>PLN02599 dihydroorotase
Probab=99.91 E-value=2.2e-22 Score=198.31 Aligned_cols=292 Identities=17% Similarity=0.160 Sum_probs=211.2
Q ss_pred eeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-c--cceeeeeeeee
Q 009282 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-N--SCMDYGFHMAI 177 (538)
Q Consensus 102 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (538)
+.+|---|+|+|+-++ .+.....-+.+.|+|++++|....+. ...+.++.+.+... . ..+++++++..
T Consensus 23 ~~~~~~~d~h~hlr~~--------~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l 94 (364)
T PLN02599 23 LTITRPDDWHLHLRDG--------AKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTL 94 (364)
T ss_pred EEecCCcceeeEccCc--------HHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEE
Confidence 5689999999999876 33333445688999999999644322 45555555555443 3 34688887666
Q ss_pred ecCChhhHHHHHHHHHHcCCc-EEEEEeeeCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009282 178 TKWDEVVSDEMEVMVKEKGIN-SFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~-~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
........+++.++. +.|+. ++|+|+...+ ....+.+.+..+++.+++.|+++.+|+++.......
T Consensus 95 ~lt~~~~l~Ei~~~~-~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~-------- 165 (364)
T PLN02599 95 YLTDNTTPEEIKAAK-ASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDI-------- 165 (364)
T ss_pred ecCCCCCHHHHHHHH-HCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCcccccc--------
Confidence 333334567787775 78988 9999875322 112236899999999999999999999885321000
Q ss_pred CCCcccccccCCchHHHHHHHHHH--HHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l--~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
...+...+.+.+ .++++.+.++++.|+++...++.++..++ + +|++++++||+.++.+++....
T Consensus 166 ------------~~~E~~~i~r~l~~~la~~~g~kI~i~HiSt~~~ve~v~~ak~-~-~vtae~tpHhL~l~~~~~~~~~ 231 (364)
T PLN02599 166 ------------FDREKVFIDTILAPLVQKLPQLKIVMEHITTMDAVEFVESCGD-G-NVAATVTPQHLLLNRNALFQGG 231 (364)
T ss_pred ------------cccHHHHHHHHHHHHHHhccCCeEEEEecChHHHHHHHHhccC-C-CEEEEecHHHHhcCHHHHhccC
Confidence 001223355667 47788899999999999988888876663 3 8999999999999988764322
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCc-eEEeCCCCCCChhhhhcCccCcccCCCCCcchhh---hHHHHHHHhhh
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGIL-QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE---RMHLVWDTMVE 406 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~-~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~---~~~~~~~~~~~ 406 (538)
.+..++++||+|...+++++|+++..|.. +.++|||+|+....|. .++|.+|++. .++.+. ..+.
T Consensus 232 --~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~--------~~~g~~Gi~~~~~~l~~l~-~~~~ 300 (364)
T PLN02599 232 --LQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKE--------ASCGCAGIYSAPVALSLYA-KAFE 300 (364)
T ss_pred --CCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhc--------CCCCCCCcccHHHHHHHHH-HHHH
Confidence 23568999999999999999999999995 8999999999877653 3445555444 466543 3444
Q ss_pred cCCCCHHHHHHHHhHhHHHHcCCCCCCccc
Q 009282 407 SGQISVTDYVRLTSTECARIFNVYPRKGAI 436 (538)
Q Consensus 407 ~~~ls~~eal~~aT~~~A~~lg~~~~~GsI 436 (538)
+.+ +++++++..+.|||+++|+..+.|+|
T Consensus 301 ~~g-~l~~l~~~~S~npA~~~gL~~~kg~i 329 (364)
T PLN02599 301 EAG-ALDKLEAFTSFNGPDFYGLPRNTSTI 329 (364)
T ss_pred hcC-CHHHHHHHHhHHHHHHhCCCCCCCeE
Confidence 444 89999999999999999994466763
No 106
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=1.3e-21 Score=185.06 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEe---eEEEEEEEC
Q 009282 408 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVK---GKVEVTIAG 484 (538)
Q Consensus 408 ~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~V~v~ 484 (538)
--|+++.+++..|..+|+++|+ .+.|.|.+|.+|||+|+|+....+... ......|+.|.... ..+..|.+.
T Consensus 472 p~l~Le~av~rmT~~~Ae~~GL-~drGlvreG~rADl~viDp~~vr~~a~----y~~~~lPa~G~~~~~vn~~~vat~v~ 546 (579)
T COG3653 472 PLLSLERAVRRMTGELAEWFGL-GDRGLVREGDRADLVVIDPHLVRDVAT----YTEPALPAYGILRVMVNRNVVATGVG 546 (579)
T ss_pred CcccHHHHHHHHhccHHHHhCc-ccccccccccccceEEEcccccccccc----ccCccCCCCcceEEEEeccceeeecc
Confidence 3499999999999999999999 679999999999999999865443321 11123566654222 235566777
Q ss_pred CEEEEECCeeeccCCCceEeecCCCcccc
Q 009282 485 GRVVWENDELNVVPGSGKYIEMRPFNYLF 513 (538)
Q Consensus 485 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (538)
|.+.+++|++.+....|+++|..++....
T Consensus 547 Gvvs~rdGe~tg~~~aGR~lR~g~~g~~~ 575 (579)
T COG3653 547 GVVSFRDGEFTGQVKAGRYLRAGELGAAL 575 (579)
T ss_pred eeEEEecCcccCcccccchhccccccccc
Confidence 99999999999964489999988766544
No 107
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.89 E-value=3e-21 Score=187.12 Aligned_cols=274 Identities=20% Similarity=0.201 Sum_probs=174.7
Q ss_pred ecccccccccccccc-C---C--CCChhhHHHHHHHHHhCCcEEEecccCCCCC--------CHHHHHHHHHHHh--ccc
Q 009282 104 MPGGIDPHTHLAMEF-M---G--SETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKA--KNS 167 (538)
Q Consensus 104 ~PGlID~H~H~~~~~-~---~--~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--------~~~~~~~~~~~~~--~~~ 167 (538)
+|||||.|+-....- . + ......+...-+.++++||||+++....+.. .....+++..... +..
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL 80 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence 699999999765531 1 1 1112223344466789999999986433311 2233333333333 334
Q ss_pred ceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC-----------------------------------ccC
Q 009282 168 CMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS-----------------------------------FMI 212 (538)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~-----------------------------------~~~ 212 (538)
.++..++..+...+.+....+..+........+.++-.-+|. ...
T Consensus 81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lvs~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (325)
T cd01306 81 RADHRLHLRCELADPAVLPELESLMADPRVHLVSLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAAY 160 (325)
T ss_pred hhhcceEEEEeecCccHHHHHHHHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhc
Confidence 566677777766677778888887755566666554332221 123
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.+.++++++.|+++|+++.+|..... +.++...+.|+.. ..|..
T Consensus 161 ~~~~~~~iv~~A~~~gl~vasH~d~~~---~~v~~a~~~Gv~~--------------------------------~E~p~ 205 (325)
T cd01306 161 APANRSELAALARARGIPLASHDDDTP---EHVAEAHELGVVI--------------------------------SEFPT 205 (325)
T ss_pred CHHHHHHHHHHHHHCCCcEEEecCCCh---HHHHHHHHCCCee--------------------------------ccCCC
Confidence 467788888999999999999985432 2233333344432 33332
Q ss_pred CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCC
Q 009282 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (538)
Q Consensus 293 ~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~ 372 (538)
+ .+.++.+++.|+.++.+... ....++. ....+++.+++.|+.++++||+.+.+
T Consensus 206 t---~e~a~~a~~~G~~vv~gapn-------------~lrg~s~----------~g~~~~~~ll~~Gv~~al~SD~~p~s 259 (325)
T cd01306 206 T---LEAAKAARELGLQTLMGAPN-------------VVRGGSH----------SGNVSARELAAHGLLDILSSDYVPAS 259 (325)
T ss_pred C---HHHHHHHHHCCCEEEecCcc-------------cccCccc----------cccHhHHHHHHCCCeEEEEcCCCcHh
Confidence 2 36777888999988754311 0001010 11244789999999999999986432
Q ss_pred hhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCc
Q 009282 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 452 (538)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~ 452 (538)
. +...+ .+....++++.++|+++|.|||+++|++ ++|+|++||.||||+|+.+..
T Consensus 260 l-----------------------l~~~~-~la~~~gl~l~eAl~~aT~nPA~~lGl~-d~G~I~~G~~ADlvvvd~~~~ 314 (325)
T cd01306 260 L-----------------------LHAAF-RLADLGGWSLPEAVALVSANPARAVGLT-DRGSIAPGKRADLILVDDMDG 314 (325)
T ss_pred H-----------------------HHHHH-HHHHHcCCCHHHHHHHHhHHHHHHcCCC-CCCCcCCCCCCCEEEEeCCCC
Confidence 1 12222 3344567999999999999999999995 679999999999999997521
Q ss_pred eeeccCcccCCCCCCccCCeEEeeEEEEEEECC
Q 009282 453 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGG 485 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G 485 (538)
...|..||++|
T Consensus 315 ----------------------~p~v~~v~~~G 325 (325)
T cd01306 315 ----------------------VPVVRTVWRGG 325 (325)
T ss_pred ----------------------CCccceEEeCc
Confidence 23688899887
No 108
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.87 E-value=7.1e-21 Score=187.03 Aligned_cols=299 Identities=23% Similarity=0.257 Sum_probs=162.4
Q ss_pred ecCCCeeeccccccccc--cccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeee
Q 009282 97 DATGKFVMPGGIDPHTH--LAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH 174 (538)
Q Consensus 97 D~~G~~v~PGlID~H~H--~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (538)
|++|++|+|||||+|+| +.....+....+........++.+|+|+++++.... .......... .....
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~~---~~~~~~~~~~-------~~~~~ 70 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGTN---PEELNRARRR-------GAGYP 70 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSSS---HHHHHHHHHH-------ESEEE
T ss_pred CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCCC---chhhHHHHhh-------ccccc
Confidence 89999999999999999 333322223333445667788999999999853222 1222222111 11111
Q ss_pred eeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcC-CeEEEEcCChhhHHHHHHHHHHcCC
Q 009282 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAENGDAVFEGQKRMIELGI 253 (538)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (538)
................+.........++...+ .....+.+....+.+...+ +.+..|+... ........-.....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (304)
T PF13147_consen 71 GSGAGPRGTTIEELEALVDLIAAEGVGFVAAY---NGIEGPGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAIAEGLDAME 146 (304)
T ss_dssp EECESCCHHHHHHHHHHHHHHHHTEEEEESSS---THHHHHHHHHHHHHHHHHTHEEEEEECHHH-HHHHHHHHHHHTTH
T ss_pred cccccccccchHHHHHHHHHHhhcCcceeecc---ccCCHHHHHHHHHHHHhcCCeeeecccchh-hHHHHHHhcccchh
Confidence 11122223333333333323233444433221 1345677788888888888 4555555333 22222211111110
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (538)
.. ...................+..+...........+.+......++....... +. .... ..
T Consensus 147 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~-----~~ 208 (304)
T PF13147_consen 147 HI--------LPHEVAEALHLAEALAQGAGPGLHCHVASDDATAEGVAIAHGFGLPPTPLHL---LA--RDAA-----AA 208 (304)
T ss_dssp HS--------THHHHHHHHHHHHHHHHHHTHCEEEEETSSHHHHHHHHHHHHTTHEEEEEEH---HH--HHHH-----HH
T ss_pred hh--------hhhhHHHHHHHHHHhhhccccchhhhhhhhhhhhHHHHHHHhhccccchHHh---hH--HHHH-----hc
Confidence 00 0111122222333333444555555555444432324445556655544431 00 0000 00
Q ss_pred ccceeecCCCC--CcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCC
Q 009282 334 AAKYVMSPPIR--ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQIS 411 (538)
Q Consensus 334 ~~~~~~~p~~r--~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls 411 (538)
...+...|+.+ .......+..++++|++++++||+.+.... +....+..... +....|+|
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~-----------------~~~~~~~~~~~-~~~~~gl~ 270 (304)
T PF13147_consen 209 GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTE-----------------GSGDLLHEAMR-LAVRAGLS 270 (304)
T ss_dssp GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTT-----------------CTTTHHHHHHH-HHHHTSST
T ss_pred CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccc-----------------cccccchhhhh-HHhhcCCC
Confidence 24566777776 667788899999999999999998765321 00223333342 33346799
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEE
Q 009282 412 VTDYVRLTSTECARIFNVYPRKGAILVGSDADII 445 (538)
Q Consensus 412 ~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlv 445 (538)
+++|++++|.|||++||+++++|+|++||+||||
T Consensus 271 ~~~al~~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 271 PEEALRAATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp HHHHHHHHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 9999999999999999999999999999999997
No 109
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.85 E-value=1.5e-20 Score=188.01 Aligned_cols=290 Identities=21% Similarity=0.232 Sum_probs=159.1
Q ss_pred eeeccccccccccccccCCCC-------ChhhHHHHHHHHHhCCcEEEecccCCCCCCH---HHHHHHHHHHhccccee-
Q 009282 102 FVMPGGIDPHTHLAMEFMGSE-------TIDDFFSGQAAALAGGTTMHIDFVIPINGSL---TAGFEAYEKKAKNSCMD- 170 (538)
Q Consensus 102 ~v~PGlID~H~H~~~~~~~~~-------~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~- 170 (538)
+|+|||||+|+|+..+ ... ..+.+....+.++++||||++++........ .................
T Consensus 1 ~v~PGlID~H~H~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQG--GLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIELRNEIMEGLAAAPKIEPAM 78 (333)
T ss_dssp EEEE-EEEEEEEGGGT--THTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CEEcChhHHhhCcCCc--CccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCccccccccccccccccchhhhccc
Confidence 6999999999999987 333 3444566778889999999999853332211 11122222222221111
Q ss_pred -------eeeeeeeecCChhh---------HHHHHHHHHHcCCc-----EEEEEeeeCCCccCCHHHHHHHHHHHHh---
Q 009282 171 -------YGFHMAITKWDEVV---------SDEMEVMVKEKGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKS--- 226 (538)
Q Consensus 171 -------~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~A~~--- 226 (538)
.+.+........+. ..++.+.....+.. .+.......+...++.+.++..++.+++
T Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 158 (333)
T PF01979_consen 79 TLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLA 158 (333)
T ss_dssp EEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHH
Confidence 11111111100000 01122222233222 3334445556677788889999999988
Q ss_pred --c-CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHH----HHHHcCCCEEEEeccCHHHHHH
Q 009282 227 --L-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR----LAEFVNTPLYVVHVMSMDAMEE 299 (538)
Q Consensus 227 --~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~----~~~~~~~~~~~~h~~~~~~~~~ 299 (538)
. +.++.+|+.+.......+.... + ...+..... .....+....+.|+..... +.
T Consensus 159 ~~~~~~~~~~h~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~-~~ 219 (333)
T PF01979_consen 159 AEKLGIPVHIHVAEGTGEVEAMTHLY--G----------------MSPIEALDHLGLLEEAIDDGVDLIAHGTHLSD-EE 219 (333)
T ss_dssp HHHHTHEEEEEESSSHHHHCCCHHHH--S----------------HHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEH-HH
T ss_pred HHhhcccceeeeccCcccceeEeeee--e----------------ccchhhhccchhhhhhcccccceeeccccCCH-HH
Confidence 3 9999999976543211111100 0 000111100 0111234556889888776 78
Q ss_pred HHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-CCceEEeCCCCCCChhhhhc
Q 009282 300 IAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-GILQLVGTDHCAFNSTQKAF 378 (538)
Q Consensus 300 i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-Gv~~~lgtD~~~~~~~~~~~ 378 (538)
++++++.+..+..++.............. .+.. .. ............+..++.. |+. +|||+.. .
T Consensus 220 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~---~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~----~--- 285 (333)
T PF01979_consen 220 IELLKETGIGIIHCPISNDSAPHKPGKAI-MMDG-TA---EGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA----E--- 285 (333)
T ss_dssp HHHHHHHTHEEEEEHHHHHHHHHHTTHHS-ETTB-SB---TSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC----H---
T ss_pred hhhhhccCCccccccchhhhhcccccccc-ccch-hc---cccccccccccchhhhhhhcccc--ccccccc----c---
Confidence 88889999988888876433100000000 0000 00 0000111223445666666 887 9999432 1
Q ss_pred CccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 379 GIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 379 ~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
++. .++..+ ++++++|+++|.|||++||+++++|+|++||+|||||||
T Consensus 286 ---------------~l~------~~~~~~-~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 286 ---------------ELK------LFVRLG-ISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp ---------------HHH------HHHHHH-SHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred ---------------ccc------cccccc-ccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 111 223333 999999999999999999999999999999999999997
No 110
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2.8e-20 Score=165.83 Aligned_cols=367 Identities=14% Similarity=0.150 Sum_probs=199.4
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCC--CCCCCceEEecCCCeeeccccccccccccccCCCCChhhH----H
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI--NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF----F 128 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~--~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~----~ 128 (538)
+-|+|++|+-.......+++|+||||..-.+-. +.......|||.|+++.|||||.....+....-....+++ .
T Consensus 14 lQFtNCrilR~g~l~~edlWVR~GRIldpe~vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGfGvDFS~dte~~~eGvA 93 (407)
T KOG3892|consen 14 LQFTNCRILRGGKLLREDLWVRGGRILDPEKVFFEERTVADERIDCGGRILAPGFIDLQINGGFGVDFSQDTEDVGEGVA 93 (407)
T ss_pred eeeeeeEEeeCCceeehheeEeCCeecCcccccceeccchhheeccCCeeecCceEEEEecCccccccccchhhhhhhHH
Confidence 678999999888888899999999998754311 1112467899999999999999999988763222333333 3
Q ss_pred HHHHHHHhCCcEEEecccCCCCCCHH-HHHHHHHHH--hcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 129 SGQAAALAGGTTMHIDFVIPINGSLT-AGFEAYEKK--AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
..++..+++|||+++......+.... ..+-..... ++.+.-..+.+...+.-+.+ +.|+..-..
T Consensus 94 lVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlEGPFIs~~----------KrG~HPE~~--- 160 (407)
T KOG3892|consen 94 LVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLEGPFISRE----------KRGAHPEAH--- 160 (407)
T ss_pred HHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeeccCCccChh----------hcCCCHHHH---
Confidence 44677899999999864322222111 111111100 11222234444444433322 111111000
Q ss_pred eCCCccCCHHHHHHHHHHHH-hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCC
Q 009282 206 YKGSFMINDELLIEGFKRCK-SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~-~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 284 (538)
...++.+.+..+....- --++.+..-+++.....+.++.+.+.|+..+.+|+.+.-...|..-...+--+...++.
T Consensus 161 ---i~s~~~~~~~~l~~tYGsleni~IvTlAPEl~~~~evi~~lv~~gitVslGHS~A~L~~gE~AV~sGat~ITHLFNA 237 (407)
T KOG3892|consen 161 ---IRSFEADAFQDLLATYGSLENIRIVTLAPELGGAQEVIRALVARGITVSLGHSVADLRAGEDAVWSGATFITHLFNA 237 (407)
T ss_pred ---HhccCccHHHHHHHHhCCccceEEEEecccccCcHHHHHHHHhcceEEeeccchhccCcHHHHHhccchHHHHHHHh
Confidence 01112333333332221 22566666666666566778888888888888887555544443222222222222221
Q ss_pred CEEEEeccCHHHHHHHHHHH----HcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC
Q 009282 285 PLYVVHVMSMDAMEEIAKAR----KAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI 360 (538)
Q Consensus 285 ~~~~~h~~~~~~~~~i~~~~----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv 360 (538)
-.-. |...+ -.+-.+. -.|-.+.....++..+..+..+.- . +....+|
T Consensus 238 Mlpf-HHRDP---GlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRI-------A----------------yrthpqG- 289 (407)
T KOG3892|consen 238 MLPF-HHRDP---GLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRI-------A----------------YRTHPQG- 289 (407)
T ss_pred cccc-ccCCC---ceeEEeecCCCCCCCeEEEEEecCCccCChhHhhh-------h----------------hhcCCCc-
Confidence 1111 11110 0111111 122233434333333333222210 0 1111122
Q ss_pred ceEEeCCCCCCChhhh---hcC-----ccCcc---cCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 361 LQLVGTDHCAFNSTQK---AFG-----IDDFR---KIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 361 ~~~lgtD~~~~~~~~~---~~~-----~~~~~---~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
+.+.||..+.--..+ .++ ..... .-....+|.-..+....+.+++..+-|.+-||++||..||..||+
T Consensus 290 -LvLVTDAI~ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~GSiApMd~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ 368 (407)
T KOG3892|consen 290 -LVLVTDAIPALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSGSIAPMDVCVRHFLKATGCSMESALEAATLHPAQLLGL 368 (407)
T ss_pred -eEEEecchhhcccccccccccceeEEEcceEEEeeccccccccccCcHHHHHHHHHhcCCcHHHHHhhhccChHHhhcc
Confidence 233344332211000 000 00000 001123444445777888888888899999999999999999999
Q ss_pred CCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 430 ~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++.+|++..|..||||++|.+ -.|+.+|+.|+.|++.
T Consensus 369 ek~KGTLDfG~dADFVllDd~-------------------------l~V~aT~isG~~V~~a 405 (407)
T KOG3892|consen 369 EKSKGTLDFGADADFVLLDDS-------------------------LHVQATYISGELVWQA 405 (407)
T ss_pred ccccccccccccCceEEEccc-------------------------eEEEEEEEccEEEEec
Confidence 999999999999999999943 3799999999999975
No 111
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.76 E-value=3.9e-17 Score=153.93 Aligned_cols=82 Identities=26% Similarity=0.406 Sum_probs=64.1
Q ss_pred CCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEE
Q 009282 409 QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVV 488 (538)
Q Consensus 409 ~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V 488 (538)
.+++.|...+--.+||+.+|+.+.+|.|-+|..||+.|.|-||...-+..+... ...+ .++-.+|+++|++|
T Consensus 437 E~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~-----v~ka---f~~A~ytlK~GeIv 508 (575)
T COG1229 437 ELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEK-----VEKA---FRKAAYTLKGGEIV 508 (575)
T ss_pred cccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHH-----HHHH---HhheeEEecCceEE
Confidence 378899999988999999999888999999999999999988664332211110 1111 24678999999999
Q ss_pred EECCeeeccC
Q 009282 489 WENDELNVVP 498 (538)
Q Consensus 489 ~~~~~~~~~~ 498 (538)
.+||+++...
T Consensus 509 vkdGeiv~~p 518 (575)
T COG1229 509 VKDGEIVAEP 518 (575)
T ss_pred EecceEEecc
Confidence 9999999875
No 112
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.72 E-value=1.2e-16 Score=153.57 Aligned_cols=235 Identities=18% Similarity=0.237 Sum_probs=132.9
Q ss_pred eeeccccccccccccccC-C-----------------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCCCH
Q 009282 102 FVMPGGIDPHTHLAMEFM-G-----------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSL 153 (538)
Q Consensus 102 ~v~PGlID~H~H~~~~~~-~-----------------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~ 153 (538)
+|+|||||+|+|+++... | ..++++++.. +..++++||||+.|+........
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 489999999999977621 1 1222333222 34568899999999743211122
Q ss_pred HHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 154 TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
....++..+.+.+. .++.. .+. ..+..++ +. ..... +..++....+ ++++++.|+++|+++.+
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~-~~~-~~~~~~~---~~--~~~~~----~~~~~~~~~~---l~~~~~~A~~~g~~v~~ 143 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILG-RPT-EPDDPEI---LL--EVADG----LGLSSANDVD---LEDILELLRRRGKLFAI 143 (263)
T ss_pred HHHHHHHHhcCCCc---eEEec-cCC-cchHHHH---HH--hhccc----ccCCCCCccC---HHHHHHHHHHCCCeeEE
Confidence 33334444444332 11111 111 1111222 21 12222 2223333333 99999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEe
Q 009282 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (538)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~ 313 (538)
|+.+..... |. ..++.++++ +.+. +.|+...++ +.++++++.|+.++.|
T Consensus 144 H~~e~~~~~---------g~----------------~~i~~~~~~----~~~~-i~H~~~l~~-~~~~~la~~g~~v~~~ 192 (263)
T cd01305 144 HASETRESV---------GM----------------TDIERALDL----EPDL-LVHGTHLTD-EDLELVRENGVPVVLC 192 (263)
T ss_pred ecCCCCCCC---------Cc----------------hhHHHHHhC----CCCE-EEEcCCCCH-HHHHHHHHcCCcEEEC
Confidence 996542100 00 112222222 4444 689988887 8899999999999998
Q ss_pred ccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcch
Q 009282 314 PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI 393 (538)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~ 393 (538)
|... +..+.+. +| +++++++|+++++|||....+.. +++.
T Consensus 193 P~sn-------------~~l~~g~---~p---------~~~l~~~Gv~v~lGtD~~~~~~~------~~~~--------- 232 (263)
T cd01305 193 PRSN-------------LYFGVGI---PP---------VAELLKLGIKVLLGTDNVMVNEP------DMWA--------- 232 (263)
T ss_pred hhhH-------------HHhCCCC---CC---------HHHHHHCCCcEEEECCCCccCCC------CHHH---------
Confidence 8652 2111111 22 78999999999999997543211 1111
Q ss_pred hhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHH
Q 009282 394 EERMHLVWDTMVESGQISVTDYVRLTSTECARI 426 (538)
Q Consensus 394 ~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~ 426 (538)
++.+......+ ...+++.++|+++|.|+|++
T Consensus 233 ~~~~~~~~~~~--~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 233 EMEFLAKYSRL--QGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred HHHHHHHHhcc--cccCCHHHHHHHHhhccccC
Confidence 22222111111 11469999999999999974
No 113
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.64 E-value=8.3e-15 Score=150.45 Aligned_cols=252 Identities=18% Similarity=0.146 Sum_probs=142.1
Q ss_pred HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc--cceeeeeee---e---eecCChhhHHHHH---HHHHHcCCcE
Q 009282 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN--SCMDYGFHM---A---ITKWDEVVSDEME---VMVKEKGINS 199 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~---~~~~~~~~~~~~~---~~~~~~g~~~ 199 (538)
...+.+.||||+.++. .........++.+.+.... ..+.+..+. . ...........+. ......|..
T Consensus 136 ~~~~~a~GiTt~~d~~-~~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~~- 213 (404)
T PF07969_consen 136 AMAAGAYGITTVLDYG-GGFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGAP- 213 (404)
T ss_dssp HHHHCHTCEEEETTCE-CCCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTSE-
T ss_pred HHHhcCCCeEEecCCc-cccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCccccc-
Confidence 3445679999999987 1122344455555544433 223333222 1 1122221222222 222233331
Q ss_pred EEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
.+..+....+.+.+.++++.|.+.|+++.+|+.++..+...++.+.....
T Consensus 214 ----~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l~a~~~~~~-------------------------- 263 (404)
T PF07969_consen 214 ----VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEALDAIEAARA-------------------------- 263 (404)
T ss_dssp ----EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHHHHHHHHTC--------------------------
T ss_pred ----ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHHHHHHhhcc--------------------------
Confidence 23455667788889999999999999999999887766666555433222
Q ss_pred HHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC
Q 009282 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (538)
Q Consensus 280 ~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G 359 (538)
...+.|+..... +.++++++.++.+...+ +++...........+..... ....+++.+++.|
T Consensus 264 -----~~~i~h~~~~~~-~~~~~~~~l~~~~~~~p--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~G 325 (404)
T PF07969_consen 264 -----RGRIEHAELIDP-DDIERMAELGVTASVQP--HFLFSWGGEWYEERLGPERA----------RRIYPIRSLLDAG 325 (404)
T ss_dssp -----CHEEEEHCBCCH-HHHHHHHHHTTEEEECC--THHHHETEETHHHHHHHHCG----------GGBTHHHHHHHCT
T ss_pred -----cceeeccccCCH-HHHHHHHHhCCccccCh--hHhhhccchhhhhhhhhHHH----------HHHhHHHHHHhcc
Confidence 116889888776 88889999998766555 22211110000000000000 0114478999999
Q ss_pred CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHH-H----H-hhhcCCCCHHHHHHHHhHhHHHHcCCCCCC
Q 009282 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW-D----T-MVESGQISVTDYVRLTSTECARIFNVYPRK 433 (538)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~-~----~-~~~~~~ls~~eal~~aT~~~A~~lg~~~~~ 433 (538)
+++++|||++..... |+... ........ . . ....+.+|++|||+++|+|||+.+|+++++
T Consensus 326 v~v~~gsD~p~~~~~-------P~~~~-------~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~ 391 (404)
T PF07969_consen 326 VRVALGSDAPVSPPN-------PFRGI-------WAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRK 391 (404)
T ss_dssp TEEEE--TTTTSSCC-------HHHHH-------HHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTS
T ss_pred CceecCcCCcccccC-------cchhh-------hhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCc
Confidence 999999996532211 22111 01110000 0 0 011266999999999999999999998888
Q ss_pred cccccCCCccEEE
Q 009282 434 GAILVGSDADIII 446 (538)
Q Consensus 434 GsI~~Gk~ADlvv 446 (538)
|+|++||.|||||
T Consensus 392 Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 392 GSLEPGKLADFVV 404 (404)
T ss_dssp SSSSTTSBS-EEE
T ss_pred ceECCCCCcCeEC
Confidence 9999999999997
No 114
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.59 E-value=3.7e-15 Score=110.62 Aligned_cols=67 Identities=51% Similarity=0.666 Sum_probs=48.0
Q ss_pred EEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEE
Q 009282 73 VYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMH 142 (538)
Q Consensus 73 V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~ 142 (538)
|+|+||||++|++....+ .+.++||++|++|+|||||+|+|+... . ............++++||||+
T Consensus 1 V~I~~g~I~~v~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~--~-~~~~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELPADAAEVIDAKGKYVMPGFIDMHTHLGEP--G-WQSLDPETEAAAALAGGVTTV 68 (68)
T ss_dssp EEEETTEEEEEESSCCTTSTCCEEEEETTCEEEE-EEEEEE-TTTT--C-EGGCTCHHHHHHHHHTTEEEE
T ss_pred CEEECCEEEEeCCCCCCCCCCCEEEECCCCEEeCCeEeeeeccccc--c-ccccchhhHHHHHHCcceeeC
Confidence 789999999997654443 456889999999999999999997733 1 111111344666789999996
No 115
>PRK06886 hypothetical protein; Validated
Probab=99.56 E-value=1.3e-12 Score=127.51 Aligned_cols=267 Identities=14% Similarity=0.139 Sum_probs=143.5
Q ss_pred ccccccccccccccCC-------------------------CCChhhHH----HHHHHHHhCCcEEEecccCCCCC---C
Q 009282 105 PGGIDPHTHLAMEFMG-------------------------SETIDDFF----SGQAAALAGGTTMHIDFVIPING---S 152 (538)
Q Consensus 105 PGlID~H~H~~~~~~~-------------------------~~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~---~ 152 (538)
=||||.|+|+...+.. ..+.+++. ..++.++++|+|.++.+....+. .
T Consensus 20 ~gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 20 GGWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDLVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred cCCccccccccccccCCCccccccCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 3899999999875311 01223332 23455688999999876533222 3
Q ss_pred HHHHHHHHHHHhc-ccceee-eeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee-CCCccCCHHHHHHHHHHHHhcCC
Q 009282 153 LTAGFEAYEKKAK-NSCMDY-GFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY-KGSFMINDELLIEGFKRCKSLGA 229 (538)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~-~~~~~~~~~~l~~~~~~A~~~g~ 229 (538)
..+.+.+..+... ..-+.+ .|...... .....+.+.+.. +. ++.+...... ......+.+.+..+++.|+++|+
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vafPq~g~~-~~~~~~l~~~al-~~-advvGGiP~~~~~~~~~~~e~l~~~~~lA~~~g~ 176 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQTLKGVI-EPTAKKWFDIGS-EM-VDMIGGLPYRDELDYGRGLEAMDILLDTAKSLGK 176 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEecChhhcc-CccHHHHHHHHH-Hh-CCEEeCccCCcCCCCCCCHHHHHHHHHHHHHcCC
Confidence 3344444333332 222222 11111111 122233343333 22 4554433111 01124567899999999999999
Q ss_pred eEEEEcCCh-hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHH------HHHHHH
Q 009282 230 LAMVHAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA------MEEIAK 302 (538)
Q Consensus 230 ~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~------~~~i~~ 302 (538)
++.+|+.+. +.....++.+. .+.++ ... ..++.+.|+..... .+.+++
T Consensus 177 ~Id~Hlde~~~~~~~~le~l~-----------------------~~~~~-~Gl-~grV~~sH~~~L~~~~~~~~~~~i~~ 231 (329)
T PRK06886 177 MVHVHVDQFNTPKEKETEQLC-----------------------DKTIE-HGM-QGRVVAIHGISIGAHSKEYRYRLYQK 231 (329)
T ss_pred CeEEeECCCCchhHHHHHHHH-----------------------HHHHH-cCC-CCCEEEEEeccccCcChhhHHHHHHH
Confidence 999999543 22222222211 01111 112 23788999987553 246899
Q ss_pred HHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccC
Q 009282 303 ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDD 382 (538)
Q Consensus 303 ~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~ 382 (538)
+++.|+.|+++|.+. +++..... .+..+.++ .++.+++++||++++|||+... +
T Consensus 232 La~agi~Vv~~P~sn-l~l~~~~~---~~p~~rGv------------~pv~eL~~aGV~V~lGtDnv~D----------~ 285 (329)
T PRK06886 232 MREADMMVIACPMAW-IDSNRKED---LMPFHNAL------------TPADEMIPEGITVALGTDNICD----------Y 285 (329)
T ss_pred HHHcCCeEEECchhh-hhhccccc---cCcCCCCC------------CCHHHHHHCCCeEEEecCCCcc----------c
Confidence 999999999998862 11111000 00011111 2389999999999999997532 2
Q ss_pred cccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 383 FRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 383 ~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
|. |+|...+-..+.... . ...-.++.++|+++|.|+|+++|++
T Consensus 286 ~~--p~g~~Dmle~~~l~~-~--~~~~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 286 MV--PLCEGDMWQELSLLA-A--GCRFYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred CC--CCCCCCHHHHHHHHH-H--HcCCCCHHHHHHHHhhhHHHHhCCC
Confidence 21 222211111111111 1 1222478999999999999999984
No 116
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.55 E-value=3e-13 Score=130.82 Aligned_cols=247 Identities=22% Similarity=0.236 Sum_probs=140.5
Q ss_pred ccccccccccccCCC------------CC----hhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhccc-c
Q 009282 107 GIDPHTHLAMEFMGS------------ET----IDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNS-C 168 (538)
Q Consensus 107 lID~H~H~~~~~~~~------------~~----~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~-~ 168 (538)
|||+|+|+....... .+ ..........++++||||+.++...... ...+..+...+..... .
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG 80 (275)
T ss_pred CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcC
Confidence 799999988762110 11 2223455677899999999998654432 1012222222222111 1
Q ss_pred eeeeeeeeeecCC--------hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009282 169 MDYGFHMAITKWD--------EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (538)
Q Consensus 169 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (538)
+...+........ +...+.+.... ..|+.++++...... ...+.+.++++++.|+++|+++.+|+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~ 158 (275)
T cd01292 81 IRVVLGLGIPGVPAAVDEDAEALLLELLRRGL-ELGAVGLKLAGPYTA-TGLSDESLRRVLEEARKLGLPVVIHAGELPD 158 (275)
T ss_pred eeeEEeccCCCCccccchhHHHHHHHHHHHHH-hcCCeeEeeCCCCCC-CCCCcHHHHHHHHHHHHcCCeEEEeeCCccc
Confidence 2222111111111 12223333332 247778876544322 1247899999999999999999999965432
Q ss_pred HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccc
Q 009282 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~ 320 (538)
. ...+.++++.... +.++++.|+...+. +.++.+++.|+.+..++.....
T Consensus 159 ~---------------------------~~~~~~~~~~~~~-~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~~~~~~~- 208 (275)
T cd01292 159 P---------------------------TRALEDLVALLRL-GGRVVIGHVSHLDP-ELLELLKEAGVSLEVCPLSNYL- 208 (275)
T ss_pred C---------------------------ccCHHHHHHHHhc-CCCEEEECCccCCH-HHHHHHHHcCCeEEECCccccc-
Confidence 1 0112223333322 67889999988755 7788888889888777654111
Q ss_pred cCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
.. +.......+..+++.|+++++|||+.+.+... .+...
T Consensus 209 -~~--------------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~--------------------~~~~~ 247 (275)
T cd01292 209 -LG--------------------RDGEGAEALRRLLELGIRVTLGTDGPPHPLGT--------------------DLLAL 247 (275)
T ss_pred -cc--------------------CCcCCcccHHHHHHCCCcEEEecCCCCCCCCC--------------------CHHHH
Confidence 00 00011234788999999999999986542110 11112
Q ss_pred HHHhhh--cCCCCHHHHHHHHhHhHHHH
Q 009282 401 WDTMVE--SGQISVTDYVRLTSTECARI 426 (538)
Q Consensus 401 ~~~~~~--~~~ls~~eal~~aT~~~A~~ 426 (538)
++.+.. ..+++.+++++++|.|||++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 248 LRLLLKVLRLGLSLEEALRLATINPARA 275 (275)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence 212221 12379999999999999974
No 117
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.07 E-value=2.5e-08 Score=98.87 Aligned_cols=142 Identities=12% Similarity=0.125 Sum_probs=95.1
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe
Q 009282 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h 290 (538)
..+.+.+..+++.|+++|+++.+|+.+..........+...|. . .+.|
T Consensus 168 ~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~~~~~~~~~~~~~g~-------------------------------~-ri~H 215 (324)
T TIGR01430 168 GGPPPDFVRAFAIARELGLHLTVHAGELGGPESVREALDDLGA-------------------------------T-RIGH 215 (324)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEecCCCCChHHHHHHHHHcCc-------------------------------h-hcch
Confidence 4468899999999999999999999643111111111112222 1 3567
Q ss_pred ccCH--HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc--cceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 291 VMSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA--AKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 291 ~~~~--~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
+... ++ +.++.++++|+.+..||.+. +..+ ..+. ..+++.++++|+++++||
T Consensus 216 g~~l~~~~-~~i~~l~~~gi~v~~cP~Sn-------------~~l~~~~~~~----------~~pi~~l~~~Gv~v~igT 271 (324)
T TIGR01430 216 GVRALEDP-ELLKRLAQENITLEVCPTSN-------------VALGVVKSLA----------EHPLRRFLEAGVKVTLNS 271 (324)
T ss_pred hhhhccCH-HHHHHHHHcCceEEECCccc-------------ccccccCCcc----------cChHHHHHHCCCEEEECC
Confidence 6655 33 68999999999999999873 2221 1111 123889999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
|.+.... ..+...+..++...++++.| |+++|.|+++...+.
T Consensus 272 D~~~~~~---------------------~~l~~e~~~a~~~~~l~~~e-l~~~~~na~~~~f~~ 313 (324)
T TIGR01430 272 DDPAYFG---------------------SYLTEEYEIAAKHAGLTEEE-LKQLARNALEGSFLS 313 (324)
T ss_pred CCCcccC---------------------CCHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 9653311 12333333455556799999 889999999998874
No 118
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.03 E-value=9.3e-08 Score=88.21 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=167.0
Q ss_pred eeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHH---HHHhcccceeeeeeeee
Q 009282 103 VMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAY---EKKAKNSCMDYGFHMAI 177 (538)
Q Consensus 103 v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~ 177 (538)
-+..-.|+|.|+-.+ ++........+.++...+-|..-.+. ...+.+... .+..+.. -.+-..+..
T Consensus 6 ~i~rPdDwHlHLRdg--------~mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~-~~F~PLMtl 76 (344)
T COG0418 6 TIRRPDDWHLHLRDG--------AMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAG-HRFTPLMTL 76 (344)
T ss_pred eccCccceeEEecCc--------cHHHHhhhhhhhhcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCC-CCCceeEEE
Confidence 356678999999776 22122222344466666666433332 222222221 1121211 111111112
Q ss_pred ecCChhhHHHHHHHHHHcCCcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009282 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (538)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (538)
...+.-..+++.+...+....++|.|..+. .....+.+.+..+++..++.|+++.+|-+......+..+
T Consensus 77 YLtd~~~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifd------- 149 (344)
T COG0418 77 YLTDSTTPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFD------- 149 (344)
T ss_pred EecCCCCHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCccccchh-------
Confidence 222222345565555233378899987642 222345788899999999999999999965432111111
Q ss_pred CCcccccccCCchHHHHHHHHHHH-H-HHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIR-L-AEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~-~-~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 331 (538)
-|..-+...++ + .++...++++.|+++.+. ++..++.+.++.++.++||+.++.++..-.+.
T Consensus 150 -------------rE~~Fi~~vl~pl~~~fP~LKIV~EHiTT~da---v~~v~~~~~nlaATIT~hHL~~nrnd~l~Ggi 213 (344)
T COG0418 150 -------------REAAFIESVLEPLRQRFPKLKIVLEHITTKDA---VEYVKDANNNLAATITPHHLLLNRNDMLVGGI 213 (344)
T ss_pred -------------hHHHHHHHHHHHHHhhCCcceEEEEEeccHHH---HHHHHhcCcceeeEeehhheeeehhhhhcCCC
Confidence 11122332332 2 244578999999988654 55566777779999999999988776543222
Q ss_pred ccccceeecCCCCCcccHHHHHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchh---hhHHHHHHHhhhc
Q 009282 332 VTAAKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIE---ERMHLVWDTMVES 407 (538)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~---~~~~~~~~~~~~~ 407 (538)
+ ..+.+.|-+....+++++.++.-.|- ++.+|||++|+....|.. .+|.+|.- ..++...+.+-+.
T Consensus 214 ~--Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~--------~cgcAG~fsap~al~~~AevFE~~ 283 (344)
T COG0418 214 R--PHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKES--------ACGCAGIFSAPFALPLYAEVFEEE 283 (344)
T ss_pred C--cceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCccccccc--------ccccccccccHhHHHHHHHHHHHh
Confidence 2 56778888888888999988766654 899999999998876653 23444432 2344444323234
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCC
Q 009282 408 GQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 408 ~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
+.+..-| ..++.|+.++.|+.
T Consensus 284 naL~~Le--aF~S~nGp~fY~lp 304 (344)
T COG0418 284 NALDNLE--AFASDNGPKFYGLP 304 (344)
T ss_pred cHHHHHH--HHHhhcCcceeccc
Confidence 4333333 34678999999995
No 119
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.97 E-value=8.2e-08 Score=91.72 Aligned_cols=243 Identities=18% Similarity=0.164 Sum_probs=131.6
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec-CChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 185 (538)
+||+|+|+... .. ..+.......+.++||++++.+.... ...+.+....+.........|++..... ..++..
T Consensus 1 ~~D~H~H~~~~--~~--~~~~~~~l~~~~~~gv~~~v~~~~~~--~~~~~~~~la~~~~~i~~~~G~hP~~~~~~~~~~~ 74 (251)
T cd01310 1 LIDTHCHLDFP--QF--DADRDDVLARAREAGVIKIIVVGTDL--KSSKRALELAKKYDNVYAAVGLHPHDADEHVDEDL 74 (251)
T ss_pred CEEeeeCCCch--hh--ccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCeEEEEeeCcchhhcCCHHHH
Confidence 68999998754 11 12334446677889999998775432 1222333332222232333444422111 122335
Q ss_pred HHHHHHHHHcCCcEE-EEEeeeCCCcc---CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSF-KFFMAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~i-k~~~~~~~~~~---~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+++++..+..+..++ ++.++...... ...+.++.+++.|.++++++.+|+.... ..
T Consensus 75 ~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~~--~~------------------ 134 (251)
T cd01310 75 DLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDAH--ED------------------ 134 (251)
T ss_pred HHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--HH------------------
Confidence 566665534455555 33333321111 3457788899999999999999986431 11
Q ss_pred cCCchHHHHHHHHHHHHHHHcC-CCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeec
Q 009282 262 SRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~-~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (538)
++++..+.+ ....+.|...... +.++.+.+.|+.+..+.... . .
T Consensus 135 -------------~~~l~~~~~~~~~~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~--~-----------~-------- 179 (251)
T cd01310 135 -------------VLEILKEYGPPKRGVFHCFSGSA-EEAKELLDLGFYISISGIVT--F-----------K-------- 179 (251)
T ss_pred -------------HHHHHHhcCCCCCEEEEccCCCH-HHHHHHHHcCCEEEeeeeec--c-----------C--------
Confidence 123334443 3345667765433 66777777888776554320 0 0
Q ss_pred CCCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHH
Q 009282 341 PPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (538)
Q Consensus 341 p~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~ 418 (538)
....+..+.+.+ -++.++||++...... . .|..+.-..+...+..+....|++.+++.+.
T Consensus 180 -------~~~~~~~~~~~~~~dril~~TD~p~~~~~~-------~----~~~~~~~~~~~~~~~~la~~~gl~~e~~~~~ 241 (251)
T cd01310 180 -------NANELREVVKEIPLERLLLETDSPYLAPVP-------F----RGKRNEPAYVKHVAEKIAELKGISVEEVAEV 241 (251)
T ss_pred -------CCHHHHHHHHhCChHHEEEcccCCCCCCCC-------C----CCCCCCChhHHHHHHHHHHHHCcCHHHHHHH
Confidence 001234444443 3789999974322110 0 0111112234444434444456999999999
Q ss_pred HhHhHHHHcC
Q 009282 419 TSTECARIFN 428 (538)
Q Consensus 419 aT~~~A~~lg 428 (538)
.+.||+++||
T Consensus 242 ~~~N~~~ll~ 251 (251)
T cd01310 242 TTENAKRLFG 251 (251)
T ss_pred HHHHHHHHhC
Confidence 9999999986
No 120
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=98.94 E-value=1.6e-07 Score=93.24 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.+..+++.|+++|+++.+|+.+........+.+...|. . .+.|+
T Consensus 170 ~~~~~~~~~~~~A~~~g~~v~~H~~E~~~~~~~~~a~~~~g~-------------------------------~-~i~H~ 217 (325)
T cd01320 170 FPPEKFVRAFQRAREAGLRLTAHAGEAGGPESVRDALDLLGA-------------------------------E-RIGHG 217 (325)
T ss_pred CCHHHHHHHHHHHHHCCCceEEeCCCCCCHHHHHHHHHHcCC-------------------------------c-ccchh
Confidence 478899999999999999999999543222222222111221 1 35676
Q ss_pred cCHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC
Q 009282 292 MSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (538)
Q Consensus 292 ~~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~ 370 (538)
.... ..+.++++++.|+.+..||.+... .+.... ....+++.+++.|+++++|||.++
T Consensus 218 ~~l~~~~~~~~~l~~~gi~v~~~P~sn~~-------------l~~~~~--------~~~~p~~~l~~~Gv~v~lgTD~~~ 276 (325)
T cd01320 218 IRAIEDPELVKRLAERNIPLEVCPTSNVQ-------------TGAVKS--------LAEHPLRELLDAGVKVTINTDDPT 276 (325)
T ss_pred hccCccHHHHHHHHHcCCeEEECCCcccc-------------ccccCC--------cccChHHHHHHCCCEEEECCCCCc
Confidence 6652 126899999999999999876322 111100 011338899999999999999753
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.... .+...+..++...++++.| |..+|.|++++..+.
T Consensus 277 ~~~~---------------------~~~~e~~~~~~~~~l~~~e-l~~~~~na~~~~f~~ 314 (325)
T cd01320 277 VFGT---------------------YLTDEYELLAEAFGLTEEE-LKKLARNAVEASFLS 314 (325)
T ss_pred ccCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 3211 1222332344445699999 566899999988763
No 121
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.89 E-value=1.6e-07 Score=89.73 Aligned_cols=245 Identities=18% Similarity=0.153 Sum_probs=125.7
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecC-ChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (538)
|||+|+|+... ... .+.......+..+|+++++.+.... . ..+.+....+..++.+...|++...... ..+..
T Consensus 1 ~iD~H~Hl~~~--~~~--~~~~~~~~~~~~~Gv~~~v~~~~~~-~-~~~~~~~~~~~~~~i~~~~GihP~~~~~~~~~~~ 74 (252)
T TIGR00010 1 LIDAHCHLDFL--DFE--EDVEEVIERAKAAGVTAVVAVGTDL-E-DFLRALELAEKYPNVYAAVGVHPLDVDDDTKEDI 74 (252)
T ss_pred CEEeccCCCCh--hhc--cCHHHHHHHHHHcCCCEEEEecCCH-H-HHHHHHHHHHHCCCEEEEEEeCcchhhcCCHHHH
Confidence 68999998654 111 1344446777889999999764331 1 1222222222222333334444311111 12344
Q ss_pred HHHHHHHHHcCCcEEEEE-eeeCCCcc---CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSFKFF-MAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~-~~~~~~~~---~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+++++..+..+..+++.. +++..... ...+.+++.++.|.++|+++.+|+.... ...++.+.+.+
T Consensus 75 ~~l~~~l~~~~~~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l~~~~--------- 143 (252)
T TIGR00010 75 KELERLAAHPKVVAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAE--EDVLDILREEK--------- 143 (252)
T ss_pred HHHHHHccCCCEEEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCcc--HHHHHHHHhcC---------
Confidence 555555433344455332 22211111 0247888889999999999999996432 12222222111
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
.....+.|...... +.+..+.+.|+.+..+.... +.
T Consensus 144 ---------------------~~~~~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~-------------~~--------- 179 (252)
T TIGR00010 144 ---------------------PKVGGVLHCFTGDA-ELAKKLLDLGFYISISGIVT-------------FK--------- 179 (252)
T ss_pred ---------------------CCCCEEEEccCCCH-HHHHHHHHCCCeEeeceeEe-------------cC---------
Confidence 11234667765443 67777777887776543210 00
Q ss_pred CCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHH
Q 009282 342 PIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~a 419 (538)
....+.++++.. -++.++||.+...+. ++... ... -..+......+....|++++++.+++
T Consensus 180 ------~~~~~~~~i~~~~~dril~~TD~p~~~~~-------~~~~~---~~~-p~~i~~~~~~~a~~~g~~~~~~~~~~ 242 (252)
T TIGR00010 180 ------NAKSLREVVRKIPLERLLVETDSPYLAPV-------PYRGK---RNE-PAFVRYTVEAIAEIKGMDVEELAQIT 242 (252)
T ss_pred ------CcHHHHHHHHhCCHHHeEecccCCCCCCC-------CCCCC---CCC-ChhHHHHHHHHHHHhCcCHHHHHHHH
Confidence 002234444443 478999997532211 01100 011 11122222122223469999999999
Q ss_pred hHhHHHHcCC
Q 009282 420 STECARIFNV 429 (538)
Q Consensus 420 T~~~A~~lg~ 429 (538)
+.||+++|++
T Consensus 243 ~~N~~~~~~~ 252 (252)
T TIGR00010 243 TKNAKRLFGL 252 (252)
T ss_pred HHHHHHHhCc
Confidence 9999999975
No 122
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=98.85 E-value=5e-07 Score=88.38 Aligned_cols=263 Identities=16% Similarity=0.112 Sum_probs=135.7
Q ss_pred cccccccccccccCCCC---------C---hhhHHHHHHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhcccceeee
Q 009282 106 GGIDPHTHLAMEFMGSE---------T---IDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (538)
Q Consensus 106 GlID~H~H~~~~~~~~~---------~---~~~~~~~~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (538)
|++.+|=|+...+.+.. . .+.....+..+.++|||++++.+.... .......+...+.+.+.+...|
T Consensus 1 g~~~~heh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G 80 (293)
T cd00530 1 GVTLTHEHLIIDSSGFVRDPPEVDDFDLADVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATG 80 (293)
T ss_pred CcccccCCeeecChhhccCcccccccchhhHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecc
Confidence 67788888876632211 1 122233456678899999999875422 2233333333333334455555
Q ss_pred eeeeeec---CChhhHHHHHH----HHHH----cCC--cEEEEE-eeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 173 FHMAITK---WDEVVSDEMEV----MVKE----KGI--NSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 173 ~~~~~~~---~~~~~~~~~~~----~~~~----~g~--~~ik~~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
++..... .......++.+ .... .+. ..++.. .++ .......+.+++.++.|+++|+++++|+...
T Consensus 81 ~hp~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~IGEigld~-~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~ 159 (293)
T cd00530 81 FYKDAFYPEWVRLRSVEELTDMLIREIEEGIEGTGIKAGIIKEAGGSP-AITPLEEKVLRAAARAQKETGVPISTHTQAG 159 (293)
T ss_pred cCCCccChHHHhhCCHHHHHHHHHHHHHhccccCCcCceEEEEeecCC-CCCHHHHHHHHHHHHHHHHHCCeEEEcCCCC
Confidence 5543211 11111122221 1111 111 223222 222 2222335678899999999999999999653
Q ss_pred -hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccc
Q 009282 239 -DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 239 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
....+.++.+.+.|+. ..++.+.|+....+.+.+..+.+.|..+..+....
T Consensus 160 ~~~~~~~l~~l~~~g~~----------------------------~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~ 211 (293)
T cd00530 160 LTMGLEQLRILEEEGVD----------------------------PSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGK 211 (293)
T ss_pred ccccHHHHHHHHHcCCC----------------------------hhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCc
Confidence 2222333333332321 12357889973223377888888997766553220
Q ss_pred ccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhh
Q 009282 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE 395 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 395 (538)
.. ....++ .......++++++.|. .+.++||.+...+. +.. .+-.+...
T Consensus 212 ~~-----------------~~~~~~--~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~-------~~~---~~~~~~~~ 262 (293)
T cd00530 212 DK-----------------IFGYPS--DETRADAVKALIDEGYGDRLLLSHDVFRKSYL-------EKR---YGGHGYDY 262 (293)
T ss_pred cc-----------------ccCCCC--HHHHHHHHHHHHHCCCcCCEEEeCCcCchhhh-------hhc---cCCCChHH
Confidence 00 000000 0112345778888887 66999996543221 011 11112122
Q ss_pred hHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHc
Q 009282 396 RMHLVWDTMVESGQISVTDYVRLTSTECARIF 427 (538)
Q Consensus 396 ~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~l 427 (538)
+...+.......|++.+++.++.|.||+++|
T Consensus 263 -~~~~~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 263 -ILTRFIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred -HHHHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 2222223445567999999999999999875
No 123
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.85 E-value=5.9e-07 Score=84.14 Aligned_cols=244 Identities=20% Similarity=0.164 Sum_probs=146.3
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCC--hhh
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWD--EVV 184 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 184 (538)
|||+|+|+... ...++.......+...||+-+...+.... .........+..+..+...|+|... ... ++.
T Consensus 3 liDtH~HL~~~----~~~~d~~~vi~~a~~~gv~~~~~~g~~~~--~~~~~~~la~~y~~v~~~~G~HP~~-~~~~~~~~ 75 (256)
T COG0084 3 LIDTHCHLDFE----EFDEDRDEVIARAREAGVKKMVVVGTDLE--DFKRALELAEKYPNVYAAVGVHPLD-ADEHSEED 75 (256)
T ss_pred cEEeeeCCCch----hhcCCHHHHHHHHHHcCCcEEEEeecCHH--HHHHHHHHHHhCCCeEEEEeeCCCc-cccccHHH
Confidence 79999999864 22334455577888999999887654322 2233334444445666777777654 322 566
Q ss_pred HHHHHHHHHH-cCCcEEE-EEeeeCCCcc----CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 185 SDEMEVMVKE-KGINSFK-FFMAYKGSFM----INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 185 ~~~~~~~~~~-~g~~~ik-~~~~~~~~~~----~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
+..+.+++.. ..+..++ +.++|.-... ...+.+++.++.|+++++++.+|+.+... +..+.+.+.+.
T Consensus 76 ~~~l~~~~~~~~~vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~~--d~~~iL~~~~~----- 148 (256)
T COG0084 76 LEELEQLAEHHPKVVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAHE--DTLEILKEEGA----- 148 (256)
T ss_pred HHHHHHHHhcCCCeEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccHH--HHHHHHHhcCC-----
Confidence 7777777743 4555554 3334432211 14577888999999999999999976422 33333322221
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
..-.+.||.+.+. +.++.+.+.|..++.+... .|..+
T Consensus 149 -------------------------~~~gi~HcFsGs~-e~a~~~~d~G~yisisG~i-------------tfk~a---- 185 (256)
T COG0084 149 -------------------------PVGGVLHCFSGSA-EEARKLLDLGFYISISGIV-------------TFKNA---- 185 (256)
T ss_pred -------------------------CCCEEEEccCCCH-HHHHHHHHcCeEEEECcee-------------ecCCc----
Confidence 1235889988776 8899999999877665443 11110
Q ss_pred ecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHH
Q 009282 339 MSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal 416 (538)
..+++..+. =-.+.+-||++-..+. |+....+ --......+..+.+..+++++++-
T Consensus 186 -----------~~~~ev~~~iPldrLL~ETDsPyl~P~-------p~rGkrN----eP~~v~~v~~~iAelk~~~~eeva 243 (256)
T COG0084 186 -----------EKLREVARELPLDRLLLETDAPYLAPV-------PYRGKRN----EPAYVRHVAEKLAELKGISAEEVA 243 (256)
T ss_pred -----------HHHHHHHHhCCHhHeEeccCCCCCCCc-------CCCCCCC----CchHHHHHHHHHHHHhCCCHHHHH
Confidence 112222221 1146788997655443 2221100 011233334344455679999999
Q ss_pred HHHhHhHHHHcCC
Q 009282 417 RLTSTECARIFNV 429 (538)
Q Consensus 417 ~~aT~~~A~~lg~ 429 (538)
+..|.|.-+++++
T Consensus 244 ~~t~~N~~~lf~~ 256 (256)
T COG0084 244 EITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998874
No 124
>PRK10812 putative DNAse; Provisional
Probab=98.84 E-value=5.6e-07 Score=85.84 Aligned_cols=249 Identities=18% Similarity=0.156 Sum_probs=138.9
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (538)
+||+|+|+...... ...++.......+...||..++..+... ..........+..+..+..+|+|..... .++.++
T Consensus 3 ~iDtH~Hl~~~~~~-~~~~d~~~vl~~a~~~gv~~~~~~~~~~--~~~~~~~~l~~~~~~v~~~~GiHP~~~~-~~~~~~ 78 (265)
T PRK10812 3 LVDSHCHLDGLDYQ-SLHKDVDDVLAKAAARDVKFCLAVATTL--PGYRHMRDLVGERDNVVFSCGVHPLNQD-EPYDVE 78 (265)
T ss_pred eEEeccCCCCccch-hhhcCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHhhCCCeEEEEEeCCCCCC-ChhHHH
Confidence 79999999642000 1123455567888899998887554321 1222222223333344555666653322 233455
Q ss_pred HHHHHHHHcCCcEE-EEEeeeCC---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 187 EMEVMVKEKGINSF-KFFMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 187 ~~~~~~~~~g~~~i-k~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
.+.++.....+.++ .+.+++.. ......+.+++.++.|.++++++.+|+.... .+.++.+.+.+..
T Consensus 79 ~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~a~--~~~l~iL~~~~~~-------- 148 (265)
T PRK10812 79 ELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRDAR--ADTLAILREEKVT-------- 148 (265)
T ss_pred HHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--HHHHHHHHhhcCC--------
Confidence 56665533344455 34455531 1122356778889999999999999996542 2333333222211
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCC
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 342 (538)
..+ .+.|+.+.+. +.++.+.+.|..+..+... .+.
T Consensus 149 --------------------~~~-~v~H~fsG~~-~~a~~~~~~G~~is~~g~~-------------t~~---------- 183 (265)
T PRK10812 149 --------------------DCG-GVLHCFTEDR-ETAGKLLDLGFYISFSGIV-------------TFR---------- 183 (265)
T ss_pred --------------------CCC-EEEEeecCCH-HHHHHHHHCCCEEEECeee-------------ecC----------
Confidence 112 3578876654 7888888889877654321 000
Q ss_pred CCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHh
Q 009282 343 IRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTS 420 (538)
Q Consensus 343 ~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT 420 (538)
....++++++.+ -++.+.||.+...+. ++....+. -..+...++.+....|++.+++.+..+
T Consensus 184 -----~~~~~~~~~~~ipldrlLlETD~P~~~p~-------~~~g~~n~----P~~i~~v~~~ia~l~g~~~eei~~~~~ 247 (265)
T PRK10812 184 -----NAEQLRDAARYVPLDRLLVETDSPYLAPV-------PHRGKENQ----PAMVRDVAEYMAVLKGVSVEELAQVTT 247 (265)
T ss_pred -----ccHHHHHHHHhCChhhEEEecCCCCCCCc-------CCCCCCCC----cHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 113355666654 478999997533221 11111110 112333333333445699999999999
Q ss_pred HhHHHHcCCC
Q 009282 421 TECARIFNVY 430 (538)
Q Consensus 421 ~~~A~~lg~~ 430 (538)
.|+.++|+++
T Consensus 248 ~N~~~lf~~~ 257 (265)
T PRK10812 248 DNFARLFHID 257 (265)
T ss_pred HHHHHHHCCC
Confidence 9999999983
No 125
>PRK09358 adenosine deaminase; Provisional
Probab=98.82 E-value=7.3e-07 Score=89.07 Aligned_cols=145 Identities=14% Similarity=0.085 Sum_probs=91.5
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe
Q 009282 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h 290 (538)
..+.+.+.++++.|+++|+++++|+.+..........+... |.. .+.|
T Consensus 178 ~~~~~~~~~~~~~A~~~g~~~~~H~~E~~~~~~~~~al~~l-------------------------------g~~-ri~H 225 (340)
T PRK09358 178 GFPPSKFARAFDRARDAGLRLTAHAGEAGGPESIWEALDEL-------------------------------GAE-RIGH 225 (340)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEcCCCCCchhHHHHHHHHc-------------------------------CCc-ccch
Confidence 35778999999999999999999996432111111111111 222 2567
Q ss_pred ccCHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCC
Q 009282 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (538)
Q Consensus 291 ~~~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~ 369 (538)
+.... ..+.++.+++.|+.+..||.+. +..+..-.+ ...+++.++++|+++++|||.+
T Consensus 226 g~~l~~~~~~~~~l~~~gi~v~~cP~Sn-------------~~l~~~~~~--------~~~pi~~l~~~Gv~v~lgTD~~ 284 (340)
T PRK09358 226 GVRAIEDPALMARLADRRIPLEVCPTSN-------------VQTGAVPSL--------AEHPLKTLLDAGVRVTINTDDP 284 (340)
T ss_pred hhhhccCHHHHHHHHHcCCeEEECCCcc-------------ccccccCCc--------ccChHHHHHHCCCEEEECCCCC
Confidence 76653 1267999999999999999863 222110000 1123899999999999999975
Q ss_pred CCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.... ..+...+..+....+++++++ ..++.|+.+...++
T Consensus 285 ~~~~---------------------~~l~~e~~~~~~~~~l~~~el-~~l~~nai~~sf~~ 323 (340)
T PRK09358 285 LVFG---------------------TTLTEEYEALAEAFGLSDEDL-AQLARNALEAAFLS 323 (340)
T ss_pred cccC---------------------CCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHCCC
Confidence 4321 122233333444446999995 55689998876663
No 126
>PRK09875 putative hydrolase; Provisional
Probab=98.79 E-value=1.7e-06 Score=83.14 Aligned_cols=260 Identities=15% Similarity=0.104 Sum_probs=143.4
Q ss_pred cccccccccccccCCC--------CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHH-Hhcccceeeeeeee
Q 009282 106 GGIDPHTHLAMEFMGS--------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK-KAKNSCMDYGFHMA 176 (538)
Q Consensus 106 GlID~H~H~~~~~~~~--------~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 176 (538)
|+..+|=|+...+.+. ...+.....++...+.|+.|++|+....-......+....+ .+-+.....|++..
T Consensus 7 G~tl~HEHl~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~ 86 (292)
T PRK09875 7 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 86 (292)
T ss_pred CcceecCCeEecChhhcCCcccccccHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCC
Confidence 8888999987653221 11222334455667899999999864443323333333333 33334445555532
Q ss_pred eec------CC-hhhHHHHHHHHHHcC-------CcEE-EEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009282 177 ITK------WD-EVVSDEMEVMVKEKG-------INSF-KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (538)
Q Consensus 177 ~~~------~~-~~~~~~~~~~~~~~g-------~~~i-k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~ 241 (538)
... .+ ++..+.+.+-. ..| +..+ ++..++........+.+++..+++.+.|.++.+|.......
T Consensus 87 ~~~p~~~~~~~~e~la~~~i~ei-~~Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g 165 (292)
T PRK09875 87 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 165 (292)
T ss_pred ccCCHHHhcCCHHHHHHHHHHHH-HHhhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccch
Confidence 211 11 12222222222 122 2334 33322211122234556677777889999999997554333
Q ss_pred HHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccccccc
Q 009282 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (538)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~ 321 (538)
.+.++.+.+.|+.. .++.+.|+....+.+.+..+.+.|+.+-.+.+-.
T Consensus 166 ~e~l~il~e~Gvd~----------------------------~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~---- 213 (292)
T PRK09875 166 LEQLALLQAHGVDL----------------------------SRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK---- 213 (292)
T ss_pred HHHHHHHHHcCcCc----------------------------ceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCC----
Confidence 33344444444421 2678999976555688888999998876653210
Q ss_pred CcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHH
Q 009282 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~ 399 (538)
. ...|. ....+.+..+.+.| -++.+++|....+. ..++|-.|....+..
T Consensus 214 --------------~-~~~pd---~~r~~~i~~L~~~Gy~drilLS~D~~~~~~-----------~~~~gg~G~~~i~~~ 264 (292)
T PRK09875 214 --------------N-SYYPD---EKRIAMLHALRDRGLLNRVMLSMDITRRSH-----------LKANGGYGYDYLLTT 264 (292)
T ss_pred --------------c-ccCCH---HHHHHHHHHHHhcCCCCeEEEeCCCCCccc-----------ccccCCCChhHHHHH
Confidence 0 00111 01235567788887 47888999643321 122333444444555
Q ss_pred HHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 400 VWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 400 ~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.+..+.+. |++.+++=++...||+++|+
T Consensus 265 ~ip~L~~~-Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 265 FIPQLRQS-GFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHHHc-CCCHHHHHHHHHHCHHHHhC
Confidence 55444455 59999999999999999874
No 127
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=98.64 E-value=5.1e-06 Score=74.11 Aligned_cols=285 Identities=15% Similarity=0.097 Sum_probs=165.0
Q ss_pred eeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceeeeeeeeeecC
Q 009282 103 VMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITKW 180 (538)
Q Consensus 103 v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (538)
-+|+.-|+|+|+..+.+ . +.+ .-....+||.-..-|..-.+. ...+.+........ ......+.+...-.
T Consensus 6 ~i~~~~DmHvHlR~g~m--l--~aV---vP~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~k-L~skttfLMslYLs 77 (344)
T KOG2902|consen 6 TITQPDDMHVHLRDGDM--L--HAV---VPHSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIMK-LPSKTTFLMSLYLS 77 (344)
T ss_pred ecCCccceeEEeccCCe--e--eee---ccccccCceeEEEEcCCCCCCcchHHHHHHHHHHHHh-cCccceeEEEEeec
Confidence 36889999999987611 0 000 112356789888877543332 33333333222211 11111112222222
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc---C--CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM---I--NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~---~--~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
.+...+++.+..+..+..++|.|........ . .-..+.-++++.++.|+++.+|-+-+...+
T Consensus 78 ~~ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D------------- 144 (344)
T KOG2902|consen 78 DKTTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSID------------- 144 (344)
T ss_pred CCCCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccC-------------
Confidence 2333455556554557788998875421111 1 245667788999999999999987653321
Q ss_pred cccccccCCchHHHHHHHHHHHHHHH-cCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (538)
+ .....|..-+..++++... ...++++.||.+.+..+.++.. .+..|.++.++|++++..++... .
T Consensus 145 --~----~Vf~aE~~Flptll~LhqrfP~LKivlEHcTt~dAv~~ve~a--~~~sVaaTvTahHL~Lt~~dwqg-----~ 211 (344)
T KOG2902|consen 145 --G----HVFDAEKIFLPTLLQLHQRFPQLKIVLEHCTTMDAVNFVESA--KEGSVAATVTAHHLLLTRNDWQG-----Q 211 (344)
T ss_pred --C----ceecchhhhHHHHHHHHHhCccceeHHHhcccHHHHHHHHhh--cCCceeeEeehheeEEehhhhcC-----C
Confidence 0 1123344455666666544 4678999999998876766653 46678888999999887665432 2
Q ss_pred cceeecCCCCCcccHHHHHHHHhcCC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcch---hhhHHHHHHHhhhcCCC
Q 009282 335 AKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI---EERMHLVWDTMVESGQI 410 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~~l~~Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~---~~~~~~~~~~~~~~~~l 410 (538)
..-.+.|-.....+++++-++.-.|- ++-+|||++|+....++.. +|++|. -..++...+.+-++|.|
T Consensus 212 P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~~~--------~~cAGvysqpfA~sy~A~VFde~gaL 283 (344)
T KOG2902|consen 212 PHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKESS--------CGCAGVYSQPFALSYYAKVFDEAGAL 283 (344)
T ss_pred CcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCcccccccC--------CCcceeecccchHHHHHHHHhhhchH
Confidence 33446666666677777776666654 7899999999988776542 233332 22344444333345544
Q ss_pred CHHHHHHHHh-HhHHHHcCCCCC
Q 009282 411 SVTDYVRLTS-TECARIFNVYPR 432 (538)
Q Consensus 411 s~~eal~~aT-~~~A~~lg~~~~ 432 (538)
+.|+..| .++-+..++.++
T Consensus 284 ---d~Lk~F~s~fG~~FY~~p~e 303 (344)
T KOG2902|consen 284 ---DKLKAFTSFFGPDFYGLPDE 303 (344)
T ss_pred ---HHHhhhHhhcCcceeccccc
Confidence 5555444 456666676443
No 128
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.64 E-value=8.1e-06 Score=77.64 Aligned_cols=248 Identities=16% Similarity=0.130 Sum_probs=134.5
Q ss_pred eccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec-CCh
Q 009282 104 MPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDE 182 (538)
Q Consensus 104 ~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 182 (538)
++.|||+|+|+... . ..++.......+...||+.++.++.... .........+..+..+..+|+|..... ..+
T Consensus 2 ~~~~iD~HcHl~~~--~--~~~~~~~~l~~a~~~gv~~~~~~~~~~~--~~~~~~~l~~~~~~v~~~~GiHP~~~~~~~~ 75 (258)
T PRK11449 2 ICRFIDTHCHFDFP--P--FSGDEEASLQRAAQAGVGKIIVPATEAE--NFARVLALAERYQPLYAALGLHPGMLEKHSD 75 (258)
T ss_pred CceEEEeccCCCCh--h--hccCHHHHHHHHHHCCCCEEEEeeCCHH--HHHHHHHHHHhCCCEEEEEeeCcCccccCCH
Confidence 45689999999653 1 1224444567778899998886643211 122222223333344555666654322 233
Q ss_pred hhHHHHHHHHHHc--CCcEEE-EEeeeCCCc---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 183 VVSDEMEVMVKEK--GINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 183 ~~~~~~~~~~~~~--g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
+..+.+.++.... .+.+++ +.+++.... ....+.+++.++.|.++++++.+|+.... .+.++.+...+.
T Consensus 76 ~~~~~l~~~l~~~~~~~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~a~--~~~~~il~~~~~--- 150 (258)
T PRK11449 76 VSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAMHLKRHDL--- 150 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcc--HHHHHHHHhcCC---
Confidence 4455565554222 233343 233332111 12356778889999999999999997542 233333222221
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (538)
..-.+.|+.+.+. +.++.+.+.|..++..... .+.
T Consensus 151 ---------------------------~~~~i~H~fsG~~-~~a~~~l~~G~~iS~~g~i-------------t~~---- 185 (258)
T PRK11449 151 ---------------------------PRTGVVHGFSGSL-QQAERFVQLGYKIGVGGTI-------------TYP---- 185 (258)
T ss_pred ---------------------------CCCeEEEcCCCCH-HHHHHHHHCCCEEEeCccc-------------ccc----
Confidence 0113788887765 8888888898776544321 000
Q ss_pred eeecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHH
Q 009282 337 YVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTD 414 (538)
Q Consensus 337 ~~~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~e 414 (538)
....++++++. --.+.+.||++..++. ++..-+ ..-..+...++.+...-++++++
T Consensus 186 -----------~~~~~~~~~~~ipldriL~ETD~P~l~p~-------~~~~~~----n~p~~~~~~~~~ia~l~~~~~~e 243 (258)
T PRK11449 186 -----------RASKTRDVIAKLPLASLLLETDAPDMPLN-------GFQGQP----NRPEQAARVFDVLCELRPEPADE 243 (258)
T ss_pred -----------CcHHHHHHHHhCChhhEEEecCCCCCCCC-------CCCCCC----CCChHHHHHHHHHHHHHCcCHHH
Confidence 00123333332 1257999997644321 111110 00112333443434455699999
Q ss_pred HHHHHhHhHHHHcCC
Q 009282 415 YVRLTSTECARIFNV 429 (538)
Q Consensus 415 al~~aT~~~A~~lg~ 429 (538)
+.+..+.|..++||+
T Consensus 244 l~~~~~~N~~~lf~~ 258 (258)
T PRK11449 244 IAEVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHHHhCc
Confidence 999999999999874
No 129
>PRK10425 DNase TatD; Provisional
Probab=98.58 E-value=1e-05 Score=76.77 Aligned_cols=251 Identities=11% Similarity=0.052 Sum_probs=135.0
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee-cCChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (538)
|||+|+|+... . ..++.......+...||..++..+.... .........+..+..+..+|+|.... ...++..
T Consensus 1 ~iDtH~HL~~~--~--~~~d~~~vl~~a~~~gv~~~i~~~~~~~--~~~~~~~l~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (258)
T PRK10425 1 MFDIGVNLTSS--Q--FAKDRDDVVARAFAAGVNGMLITGTNLR--ESQQAQKLARQYPSCWSTAGVHPHDSSQWQAATE 74 (258)
T ss_pred CEEeeeCcCCh--h--hhccHHHHHHHHHHCCCCEEEEeCCCHH--HHHHHHHHHHhCCCEEEEEEeCcCccccCCHHHH
Confidence 68999998643 1 1245556678888899988876543311 22222222333334455667665432 2234445
Q ss_pred HHHHHHHHHcCCcEEE-EEeeeCCC---ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSFK-FFMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik-~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+.+..+.+.....+++ +.+++... .....+.+++.++.|.++++++.+|+.... ++.++.+....
T Consensus 75 ~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~a~--~~~l~iL~~~~--------- 143 (258)
T PRK10425 75 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRDAH--ERFMALLEPWL--------- 143 (258)
T ss_pred HHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeCch--HHHHHHHHHhc---------
Confidence 5565555333333443 33444211 111246778889999999999999997442 23332221110
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
...+-.+.|+.+.+. +.++.+.+.|..+..+.... + . +
T Consensus 144 --------------------~~~~~~i~H~fsG~~-~~~~~~l~~G~~~si~g~i~-------------~-----~---~ 181 (258)
T PRK10425 144 --------------------DKLPGAVLHCFTGTR-EEMQACLARGLYIGITGWVC-------------D-----E---R 181 (258)
T ss_pred --------------------cCCCCeEEEecCCCH-HHHHHHHHCCCEEEECceee-------------c-----c---c
Confidence 011114679988775 88888888898776543210 0 0 0
Q ss_pred CCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHH
Q 009282 342 PIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~a 419 (538)
....++++++. . -.+.+-||.+-..+. ++...+.|-..--..+...+..+...-+++.+++.+..
T Consensus 182 ------~~~~~~~~~~~ipldrlLlETDaP~l~P~-------~~~~~~~~~~n~P~~i~~v~~~iA~l~~~~~~~v~~~~ 248 (258)
T PRK10425 182 ------RGLELRELLPLIPAERLLLETDAPYLLPR-------DLTPKPASRRNEPAFLPHILQRIAHWRGEDAAWLAATT 248 (258)
T ss_pred ------ccHHHHHHHHhCChHHEEEeccCCCCCCC-------CcCCCCCCCCCCcHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 00112333221 1 257889996533221 12110011111112344444455555679999999999
Q ss_pred hHhHHHHcCC
Q 009282 420 STECARIFNV 429 (538)
Q Consensus 420 T~~~A~~lg~ 429 (538)
+.|.-+++|+
T Consensus 249 ~~N~~~lf~~ 258 (258)
T PRK10425 249 DANARTLFGL 258 (258)
T ss_pred HHHHHHHhCc
Confidence 9999898874
No 130
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.42 E-value=9.7e-06 Score=78.58 Aligned_cols=267 Identities=16% Similarity=0.140 Sum_probs=138.3
Q ss_pred cccccccccccccCCC--------C----ChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHH-HHhcccceeee
Q 009282 106 GGIDPHTHLAMEFMGS--------E----TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYE-KKAKNSCMDYG 172 (538)
Q Consensus 106 GlID~H~H~~~~~~~~--------~----~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 172 (538)
|+..+|=|+...+.+. . ..+.....++.+.+.|+.|++|+....-......+.... +.+-......|
T Consensus 7 G~tl~HEHl~~d~~~~~~~~~~~~~~~~~~~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG 86 (308)
T PF02126_consen 7 GFTLMHEHLLIDLSGFYKDPDEALDDRDEDVEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTG 86 (308)
T ss_dssp SSEEEEEESEEETTTHHHHTGGGGCGHHHHHHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEE
T ss_pred CCeecccCeeecChhhccCCCcchhhhhhhHHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCC
Confidence 7788899987653221 1 112222345556789999999986544332333333333 33344555666
Q ss_pred eeeeeecCC---hhhHHHHHHHH-H--HcCCc-------EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009282 173 FHMAITKWD---EVVSDEMEVMV-K--EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (538)
Q Consensus 173 ~~~~~~~~~---~~~~~~~~~~~-~--~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~ 239 (538)
++....... ....+++.++. + ..|.+ .+|...++..........+++...++++.|.++++|.....
T Consensus 87 ~y~~~~~p~~~~~~s~e~la~~~i~Ei~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~ 166 (308)
T PF02126_consen 87 FYKEPFYPEWVREASVEELADLFIREIEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGT 166 (308)
T ss_dssp E-SGGCSCHHHHTSHHHHHHHHHHHHHHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTG
T ss_pred CCccccCChhhhcCCHHHHHHHHHHHHHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCC
Confidence 665322111 11122222221 1 23433 56665444222222345566667777888999999996654
Q ss_pred -hHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccc
Q 009282 240 -AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (538)
Q Consensus 240 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~ 318 (538)
...+.++.+.+.|+.. .++++.|+....+.+.+..+.+.|+.+..+..-..
T Consensus 167 ~~~~e~~~il~e~Gv~~----------------------------~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~ 218 (308)
T PF02126_consen 167 RMGLEQLDILEEEGVDP----------------------------SRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGRE 218 (308)
T ss_dssp TCHHHHHHHHHHTT--G----------------------------GGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B
T ss_pred cCHHHHHHHHHHcCCCh----------------------------hHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCccc
Confidence 4556666666666642 25788998866666888889999988776544211
Q ss_pred cccCcccccCCCcccccceeecCCCCCc---ccHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCccCcccCCCCCcch
Q 009282 319 LVLDDSWLWHSDFVTAAKYVMSPPIRAS---GHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI 393 (538)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~---~~~~~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~ 393 (538)
+. +...+|..... ...+.+..+.++|. .+.++.|..-.. ...++|..|.
T Consensus 219 ~~---------------g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~-----------~~~~~gg~g~ 272 (308)
T PF02126_consen 219 FS---------------GKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKS-----------RLYRYGGGGY 272 (308)
T ss_dssp -T---------------TTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEE-----------GSSSCCHHHH
T ss_pred cc---------------CcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccccc-----------cccccCCCCc
Confidence 10 00010111111 12355678888877 789998854211 1122332222
Q ss_pred hhh--HHHHHHHhhhcCCCCHHHHHHHHhHhHHHHc
Q 009282 394 EER--MHLVWDTMVESGQISVTDYVRLTSTECARIF 427 (538)
Q Consensus 394 ~~~--~~~~~~~~~~~~~ls~~eal~~aT~~~A~~l 427 (538)
... +...+-.+ .+.|+|.++.=++...||+++|
T Consensus 273 ~~~~i~~~fiP~L-~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 273 GYIYILTRFIPRL-KERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp TTTHHHHTHHHHH-HHTTS-HHHHHHHHTHHHHHHH
T ss_pred cHHHHHHHHHHHH-HHcCCCHHHHHHHHHHCHHHHc
Confidence 111 12222222 3346999999999999999987
No 131
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.39 E-value=2.8e-05 Score=74.18 Aligned_cols=244 Identities=17% Similarity=0.144 Sum_probs=131.6
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc-cceeeeeeeeeecC-ChhhH
Q 009282 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVS 185 (538)
Q Consensus 108 ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 185 (538)
||+|.|+... . ..++.......+...|++.++.+..... ............+. ....+|+|...... .++..
T Consensus 1 iD~H~Hl~~~--~--~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (255)
T PF01026_consen 1 IDAHCHLDSP--R--FEEDRPEVLERAREAGVSAIIIVSTDPE--DWERVLELASQYPDRVYPALGIHPWEAHEVNEEDL 74 (255)
T ss_dssp EEEEE-TTSG--G--GTTTHHHHHHHHHHTTEEEEEEEESSHH--HHHHHHHHHHHTTTEEEEEE---GGGGGGHSHHHH
T ss_pred CcCccCCCCh--h--hCcCHHHHHHHHHHcCCCEEEEcCCCHH--HhHHHHHHHhcCCCeEEEEecCCcchhhhhhHHHH
Confidence 7999999763 1 1233445568888999999986644322 22222222333222 55566666543322 34445
Q ss_pred HHHHHH--HHHcCCcEEE-EEeeeCCC----ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 186 DEMEVM--VKEKGINSFK-FFMAYKGS----FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 186 ~~~~~~--~~~~g~~~ik-~~~~~~~~----~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
+.+.++ .......+++ +.+++... .....+.+++.++.|.++++++.+|+.... .+.++.+.+.+..
T Consensus 75 ~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~--~~~l~il~~~~~~---- 148 (255)
T PF01026_consen 75 EELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAH--EELLEILKEYGPP---- 148 (255)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHH--HHHHHHHHHTTGG----
T ss_pred HHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcH--HHHHHHHHhcccc----
Confidence 666666 3334445554 44555211 112356778889999999999999997642 2334333333211
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
+. -.+.|+.+.+. +.++.+.+.|+.++.+.... +..
T Consensus 149 ------------------------~~-~~i~H~f~g~~-~~~~~~~~~g~~~S~~~~~~-------------~~~----- 184 (255)
T PF01026_consen 149 ------------------------NL-RVIFHCFSGSP-EEAKKFLDLGCYFSFSGAIT-------------FKN----- 184 (255)
T ss_dssp ------------------------TS-EEEETT--S-H-HHHHHHHHTTEEEEEEGGGG-------------STT-----
T ss_pred ------------------------ce-eEEEecCCCCH-HHHHHHHhcCceEEeccccc-------------ccc-----
Confidence 11 46889877665 77777778887776655420 000
Q ss_pred ecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHH
Q 009282 339 MSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal 416 (538)
.....++++. .-.+.+-||.+-..+. ++. |....-..+...++.+.+..+++++++.
T Consensus 185 ----------~~~~~~~~~~ip~drillETD~P~~~~~-------~~~----~~~~~p~~i~~~~~~la~~~~~~~e~~~ 243 (255)
T PF01026_consen 185 ----------SKKVRELIKAIPLDRILLETDAPYLAPD-------PYR----GKPNEPSNIPKVAQALAEIKGISLEELA 243 (255)
T ss_dssp ----------SHHHHHHHHHS-GGGEEEE-BTTSSECT-------TST----TSE--GGGHHHHHHHHHHHHTSTHHHHH
T ss_pred ----------cHHHHHHHhcCChhhEEEcCCCCcCCcc-------ccC----CCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 0112333322 2368999996433221 111 1011122344445445555569999999
Q ss_pred HHHhHhHHHHcC
Q 009282 417 RLTSTECARIFN 428 (538)
Q Consensus 417 ~~aT~~~A~~lg 428 (538)
+..+.|..+++|
T Consensus 244 ~~~~~N~~r~f~ 255 (255)
T PF01026_consen 244 QIIYENAKRLFG 255 (255)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 999999999886
No 132
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=98.11 E-value=0.00031 Score=62.45 Aligned_cols=231 Identities=15% Similarity=0.142 Sum_probs=124.4
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-----CHHHHHHHHH--------HHhcccceeeee
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-----SLTAGFEAYE--------KKAKNSCMDYGF 173 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~ 173 (538)
+||+|+|+... +.+++. ....+||-+++.....+.. ...+.++... +.+-+..+.+|.
T Consensus 2 ~iD~HiH~d~r-----~~eDle----kMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGv 72 (254)
T COG1099 2 YIDSHIHLDVR-----GFEDLE----KMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGV 72 (254)
T ss_pred ccccccccccc-----cHHHHH----HHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEecc
Confidence 69999999654 445543 3445566666544322221 1111111111 112224555666
Q ss_pred eeeeecCC-hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCC---HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009282 174 HMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN---DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (538)
Q Consensus 174 ~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~---~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (538)
+....+.+ ++.+.++..+....++.+++.. |....+ .+.++..++.|+++++++.+|.+..+..
T Consensus 73 HPr~iP~e~~~~l~~L~~~l~~e~VvAiGEi----GLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK~-------- 140 (254)
T COG1099 73 HPRAIPPELEEVLEELEELLSNEDVVAIGEI----GLEEATDEEKEVFREQLELARELDVPVIVHTPRRNKK-------- 140 (254)
T ss_pred CCCCCCchHHHHHHHHHhhcccCCeeEeeec----ccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcch--------
Confidence 65443333 4566666666633344444321 222223 5667888999999999999999654321
Q ss_pred HcCCCCcccccccCCchHHHHHHHHHHHHHHHcCC---CEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccc
Q 009282 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (538)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~---~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (538)
+.+.+.+++....+. .+.+.|+.. +.++.+-+.+.++-.+..|-
T Consensus 141 --------------------e~t~~ildi~~~~~l~~~lvvIDH~N~----etv~~vld~e~~vGlTvqPg--------- 187 (254)
T COG1099 141 --------------------EATSKILDILIESGLKPSLVVIDHVNE----ETVDEVLDEEFYVGLTVQPG--------- 187 (254)
T ss_pred --------------------hHHHHHHHHHHHcCCChhheehhcccH----HHHHHHHhccceEEEEecCC---------
Confidence 223344444444433 356788865 66666666776654444431
Q ss_pred cCCCcccccceeecCCCCCcccHHHHHHHHhcC-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh
Q 009282 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (538)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~ 405 (538)
++.+ .+++.-..+.| -++.+.||......+ +++ .+... ..+
T Consensus 188 -----------Klt~-------~eAveIV~ey~~~r~ilnSD~~s~~sd-------~la------------vprta-l~m 229 (254)
T COG1099 188 -----------KLTV-------EEAVEIVREYGAERIILNSDAGSAASD-------PLA------------VPRTA-LEM 229 (254)
T ss_pred -----------cCCH-------HHHHHHHHHhCcceEEEeccccccccc-------chh------------hhHHH-HHH
Confidence 1111 12233233335 678888884432221 221 12211 112
Q ss_pred hcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 406 ESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 406 ~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
...|+..++.-+-+-.|+-+++|+
T Consensus 230 ~~~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 230 EERGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHhcCCHHHHHHHHHHHHHHHhCc
Confidence 344699999999999999988887
No 133
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.07 E-value=0.00055 Score=64.21 Aligned_cols=156 Identities=17% Similarity=0.086 Sum_probs=92.3
Q ss_pred HHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeec------CC-hhhHHHHHHHHHHcC------
Q 009282 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITK------WD-EVVSDEMEVMVKEKG------ 196 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~g------ 196 (538)
.....+.|+-|++|+....-. +.....+-..+.+.+.....|++..... .+ ++..+.+..-. +.|
T Consensus 54 ~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~~p~~~~~~~i~~~ae~~v~ei-~~Gi~gT~i 132 (316)
T COG1735 54 LKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAFHPEYFALRPIEELAEFVVKEI-EEGIAGTGI 132 (316)
T ss_pred HHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEeccccccccchhHHhhCCHHHHHHHHHHHH-HhcccCCcc
Confidence 445678999999999744433 3333333333444445555555443221 11 12222222222 233
Q ss_pred -CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 197 -INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 197 -~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
+..+|..-.+++........+++..++.++.|.|+.+|.+......+.++.+.+.|+..
T Consensus 133 kAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~eq~~il~~egvdl-------------------- 192 (316)
T COG1735 133 KAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLEQLRILAEEGVDL-------------------- 192 (316)
T ss_pred ccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHHHHHHHHHcCCCh--------------------
Confidence 44556554444432333455666677777889999999987766666666666666532
Q ss_pred HHHHHHcCCCEEEEecc-CHHHHHHHHHHHHcCCcEEEecc
Q 009282 276 IRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~-~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
.++.+.|+. +.++....+.++.+|+.+..+..
T Consensus 193 --------~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~i 225 (316)
T COG1735 193 --------RKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRI 225 (316)
T ss_pred --------hHeeEeccCCCCChHHHHHHHHhcCceEEeccc
Confidence 256899998 66666778888888987765544
No 134
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=97.87 E-value=5.3e-05 Score=61.54 Aligned_cols=135 Identities=24% Similarity=0.290 Sum_probs=83.5
Q ss_pred CCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec
Q 009282 100 GKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (538)
Q Consensus 100 G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (538)
||+++|||||.|+|+..+ |....+.+. . |++.|+...+.. .+ ++.
T Consensus 1 ~kli~~g~vd~hVhlrep--g~~~keti~--------t---T~~ampnt~paP------------------a~----itv 45 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLREP--GFEAKETIE--------T---TWCAMPNTFPAP------------------AG----ITV 45 (142)
T ss_pred Cceeehhhhhhhhhhhcc--cchhhhhhh--------c---eeeecCccCCCC------------------cc----eee
Confidence 689999999999999887 544333332 1 676664332221 00 000
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHH----HHHHHcCCCC
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ----KRMIELGITG 255 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~----~~~~~~g~~~ 255 (538)
+..|...+ .++.++........+.+.++. .+.+..+..|++++....... +....+|+.
T Consensus 46 -------------~~~~~e~~--afsddg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~~- 108 (142)
T PF12890_consen 46 -------------EDDGEEAF--AFSDDGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGVY- 108 (142)
T ss_pred -------------eecCcceE--EEecCCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCCc-
Confidence 01122222 224444455566777777777 888999999998764333222 112223310
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.+..+|...+.+.+.+++..+.+.|+.|.++
T Consensus 109 -------L~G~cEs~~~~rd~lLak~~g~~yhVchvst 139 (142)
T PF12890_consen 109 -------LKGNCESVQCARDVLLAKATGCHYHVCHVST 139 (142)
T ss_pred -------CCCcchHHHHHHHHHhhhccCCcEEEEEEec
Confidence 2336788999999999999999999999875
No 135
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=97.77 E-value=0.0065 Score=60.42 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 212 INDELLIEGFKRCKSLG--ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
.+...+..+++.|++.| +++.+|+.+.... + ....+.+.+++.+ +.. .+.
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~----------~-------------~~~~~~v~~al~l----g~~-RIG 227 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGD----------G-------------TETDENLVDALLL----NTK-RIG 227 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCC----------C-------------CCChhHHHHHHHh----CCC-cCc
Confidence 45788899999999999 9999999543210 0 0000112222211 110 234
Q ss_pred eccCH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCC
Q 009282 290 HVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 290 h~~~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
|.... .+.+.++.++++++++-.||++....-.-. . -..-+++.++++|++++++||.
T Consensus 228 HG~~~~~dp~ll~~l~~~~I~lEvCPtSN~~~~~v~-----------------~----~~~HPl~~ll~~Gv~vtinTDD 286 (345)
T cd01321 228 HGFALPKHPLLMDLVKKKNIAIEVCPISNQVLGLVS-----------------D----LRNHPAAALLARGVPVVISSDD 286 (345)
T ss_pred cccccCcCHHHHHHHHHcCCeEEECcchhhhhcccc-----------------c----hhhChHHHHHHCCCeEEEeCCC
Confidence 44332 123889999999999999998743211000 0 0123488999999999999997
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCC---CCHHHHHHHHhHhHHHHcCC
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ---ISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~---ls~~eal~~aT~~~A~~lg~ 429 (538)
+... +.. .+...+..+....+ ++.++..+ .+.|+.++..+
T Consensus 287 p~~f----------------~t~----~l~~Ey~~~~~~~g~~~l~~~~l~~-l~~nsi~~sF~ 329 (345)
T cd01321 287 PGFW----------------GAK----GLSHDFYQAFMGLAPADAGLRGLKQ-LAENSIRYSAL 329 (345)
T ss_pred cchh----------------CCC----CchHHHHHHHHHhccCCCCHHHHHH-HHHHHHHHHCC
Confidence 6431 110 12222223333445 99988666 46777766655
No 136
>PTZ00124 adenosine deaminase; Provisional
Probab=97.76 E-value=0.0034 Score=62.59 Aligned_cols=140 Identities=11% Similarity=0.118 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCCh---hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 215 ELLIEGFKRCKSLGALAMVHAENG---DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
..+..+++.|++.|+++.+|+.+. .......+.+...|.. .+.|+
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~v~~ai~~l~~~--------------------------------RIGHG 253 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNLNTLYSAIQVLKVK--------------------------------RIGHG 253 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcchhHHHHHHHhCCC--------------------------------ccccc
Confidence 568899999999999999999542 1111111111111111 24454
Q ss_pred cCH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC
Q 009282 292 MSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (538)
Q Consensus 292 ~~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~ 370 (538)
... .+.+.++.++++++++..||.+... .+.. +. -..-+++.++++|++++++||.+.
T Consensus 254 ~~~~~d~~l~~~l~~~~I~lEvCPtSN~~-------------~~~v----~~----~~~HPi~~l~~~Gv~v~InTDDp~ 312 (362)
T PTZ00124 254 IRVAESQELIDMVKEKDILLEVCPISNVL-------------LNNA----KS----MDTHPIRKLYDAGVKVSVNSDDPG 312 (362)
T ss_pred cccCCCHHHHHHHHHcCCeEEECCcchhh-------------hhcC----Cc----hhhHHHHHHHHCCCcEEEeCCCcc
Confidence 433 1237889999999999999997322 1100 00 112458899999999999999764
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
... ..+...+..+....|++.++..++ +.|+.++..+
T Consensus 313 ~~~---------------------t~l~~Ey~~~~~~~gls~~~l~~l-~~nai~asF~ 349 (362)
T PTZ00124 313 MFL---------------------TNINDDYEELYTHLNFTLADFMKM-NEWALEKSFL 349 (362)
T ss_pred ccC---------------------CChhHHHHHHHHHcCCCHHHHHHH-HHHHHHHhcC
Confidence 321 123344444556677999998886 6666655544
No 137
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=97.45 E-value=0.02 Score=56.08 Aligned_cols=141 Identities=13% Similarity=0.067 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 213 NDELLIEGFKRCKSLG-ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
+...+...++.|++.| +++.+|+.+.... ..+.+++... .-.+.|+
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~----------------------------~~v~~~~~~~-----~~RIgHg 197 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNR----------------------------EELLQALLLL-----PDRIGHG 197 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCCh----------------------------HHHHHHHHhc-----cceeece
Confidence 5788899999999999 9999999543211 1122222211 1134444
Q ss_pred cCHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC
Q 009282 292 MSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (538)
Q Consensus 292 ~~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~ 370 (538)
.... ..+.++.++++++++..||.+........ .+. .-++..+++.|++++++||.+.
T Consensus 198 ~~~~~~p~~~~~l~~~~i~ie~CP~SN~~~~~~~-----------~~~----------~hP~~~~~~~G~~v~i~TDd~~ 256 (305)
T cd00443 198 IFLLKHPELIYLVKLRNIPIEVCPTSNVVLGTVQ-----------SYE----------KHPFMRFFKAGLPVSLSTDDPG 256 (305)
T ss_pred EecCCCHHHHHHHHHcCCEEEECcchhhhhcCCC-----------Chh----------hChHHHHHHCCCeEEEeCCCCc
Confidence 4321 12778889999999999998732211111 011 1238899999999999999764
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
.... .+...+..+....+++.++..++ ..|+-+.-.+
T Consensus 257 ~~~~---------------------~l~~E~~~~~~~~~l~~~~l~~l-~~nsi~~sf~ 293 (305)
T cd00443 257 IFGT---------------------SLSEEYSLAAKTFGLTFEDLCEL-NRNSVLSSFA 293 (305)
T ss_pred ccCC---------------------ChHHHHHHHHHHcCcCHHHHHHH-HHHHHHHhcC
Confidence 3211 22333333444556999887765 4666555544
No 138
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=97.36 E-value=0.01 Score=57.12 Aligned_cols=186 Identities=15% Similarity=0.107 Sum_probs=99.2
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
.++..+++++.....|..++|++....+....+......+++.|.++|+++.+|+..........
T Consensus 83 ~~~~~~~l~~~~~~~g~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~--------------- 147 (273)
T PF04909_consen 83 PEDAVEELERALQELGFRGVKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPS--------------- 147 (273)
T ss_dssp HHHHHHHHHHHHHTTTESEEEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHH---------------
T ss_pred chhHHHHHHHhccccceeeeEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhH---------------
Confidence 45677778777778899999988766554444444445999999999999999965111000000
Q ss_pred ccCCchHHHHHHHHHHHHHHHc-CCCEEEEeccCH--HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccce
Q 009282 261 LSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~h~~~~--~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
.......+..++..+ +.++++.|+... .-.+.++.+++. -++.......... ..
T Consensus 148 -------~~~~~~~~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~-~nvy~d~s~~~~~---------------~~ 204 (273)
T PF04909_consen 148 -------DPADPEELEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF-PNVYVDLSGIPPF---------------WY 204 (273)
T ss_dssp -------HHHHHHHHTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH-TTEEEECHSHHSS---------------EE
T ss_pred -------HHHHHHHHHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC-Ccccccccccccc---------------cc
Confidence 012222233333343 789999999887 332444443433 3455443320000 00
Q ss_pred eecCCCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHH
Q 009282 338 VMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~ea 415 (538)
. .........+..+++. | -++.+|||.+...... ...... .......+|.++.
T Consensus 205 ~----~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~~~~--------------------~~~~~~-~~~~~~~l~~~~~ 259 (273)
T PF04909_consen 205 F----WPPSFDRPFLRRAVDEFGPDRILFGSDYPHPDGAS--------------------PYEYIW-EAYFLDDLSEEER 259 (273)
T ss_dssp E----ETTHHCHHHHHHHHHHHTGGGEEEE--TTSSTHHH--------------------HHHHHH-HHHHHHHSSHHHH
T ss_pred c----CcccccHHHHHHHHHHhCCceEEecCCCCCCCccc--------------------cHHHHH-HhhhccCCCHHHH
Confidence 0 0000112334444443 3 3899999965332211 111111 1111111789999
Q ss_pred HHHHhHhHHHHcCC
Q 009282 416 VRLTSTECARIFNV 429 (538)
Q Consensus 416 l~~aT~~~A~~lg~ 429 (538)
=+....|+++++|+
T Consensus 260 ~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 260 EKILYDNARRLYGL 273 (273)
T ss_dssp HHHHTHHHHHHHTC
T ss_pred HHHHhHhHHHHcCc
Confidence 99999999999985
No 139
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=97.33 E-value=0.0072 Score=60.18 Aligned_cols=173 Identities=12% Similarity=0.043 Sum_probs=92.7
Q ss_pred ChhhHHHHHHHHHHcCC-cEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 181 DEVVSDEMEVMVKEKGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
..+...++.++...... ..+.+-+.+. ........+..+++.|++.|+++..|+.+........+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~vvG~dl~g~-E~~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~~~~ai~~--------- 215 (331)
T PF00962_consen 146 PDEWAEEIVELASKYPDKGVVGFDLAGD-EDGGPPLKFAPAFRKAREAGLKLTVHAGETGGPEHIRDAILL--------- 215 (331)
T ss_dssp THHHHHHHHHHHHHTTTTTEEEEEEESS-TTSTTGGGHHHHHHHHHHTT-EEEEEESSSSTHHHHHHHHHT---------
T ss_pred hHHHHHHHHHHHhhcccceEEEEEecCC-cccCchHHHHHHHhhhcccceeecceecccCCcccccchhhh---------
Confidence 45555555555534333 3444433332 122344458899999999999999999654333222222211
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
++.. .+.|+.... ..+.++.++++++++-.||.+....-.-. .+.
T Consensus 216 ----------------------l~~~-RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~-----------~~~ 261 (331)
T PF00962_consen 216 ----------------------LGAD-RIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGAVP-----------SYE 261 (331)
T ss_dssp ----------------------ST-S-EEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSS-----------TGG
T ss_pred ----------------------ccce-eecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccceee-----------ecc
Confidence 1211 467765432 23678889999999999998743321100 111
Q ss_pred ecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHH
Q 009282 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~ 418 (538)
.-+++.++++|++++++||.+... ...+...+..+....++|.++..+
T Consensus 262 ----------~hP~~~~~~~gv~v~i~TDd~~~~---------------------~~~l~~ey~~~~~~~~l~~~~l~~- 309 (331)
T PF00962_consen 262 ----------EHPLRKLLDAGVPVSINTDDPGVF---------------------GTTLSDEYYLAAEAFGLSLADLKQ- 309 (331)
T ss_dssp ----------G-CHHHHHHTT-EEEE--BSHHHH---------------------T-SHHHHHHHHHHHHT--HHHHHH-
T ss_pred ----------hhHHHHHHHcCCceeccCCCcccc---------------------CCCcHHHHHHHHHHcCCCHHHHHH-
Confidence 123899999999999999965321 112444443444445799988665
Q ss_pred HhHhHHHHcCC
Q 009282 419 TSTECARIFNV 429 (538)
Q Consensus 419 aT~~~A~~lg~ 429 (538)
...|+.++-.+
T Consensus 310 l~~nsi~~sf~ 320 (331)
T PF00962_consen 310 LARNSIEASFL 320 (331)
T ss_dssp HHHHHHHCSSS
T ss_pred HHHHHHHHHcC
Confidence 46777766655
No 140
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=97.09 E-value=0.12 Score=49.64 Aligned_cols=123 Identities=18% Similarity=0.129 Sum_probs=67.3
Q ss_pred cccccccccccccCCCC--------ChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeee
Q 009282 106 GGIDPHTHLAMEFMGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMA 176 (538)
Q Consensus 106 GlID~H~H~~~~~~~~~--------~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (538)
|.||+|.|++..-.... ..-........+-..||+..+-....... .....++... ...+ +..+..
T Consensus 1 ~~iD~H~H~~~~~~~~~~~~~~~~~~~~~~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~-~~~r-~~g~~~--- 75 (263)
T cd01311 1 GAVDAHMHVFDPGYPFPPAPEKFTPYDPGIDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALA-SNGK-ARGGAT--- 75 (263)
T ss_pred CCEEeeeeeeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHh-hCCC-eEEEEE---
Confidence 67999999986511000 01112222444556898876643211111 2222333332 2111 222211
Q ss_pred eecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 177 ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
..... ...++++++. ..|..++++.....+.. +.+.+...++.+.++|+++.+|+..
T Consensus 76 ~~p~~-~~~~~l~~~~-~~g~rGvRl~~~~~~~~--~~~~~~~~~~~~~~~gl~v~~~~~~ 132 (263)
T cd01311 76 VDPRT-TTDAELKEMH-DAGVRGVRFNFLFGGVD--NKDELDEIAKRAAELGWHVQVYFDA 132 (263)
T ss_pred ECCCC-CCHHHHHHHH-HCCCeEEEEecccCCCC--CHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 11111 1245666664 68999999765433332 7788899999999999999999853
No 141
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=96.95 E-value=0.037 Score=54.26 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=88.0
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
.....+.+..+++.++..|+.+.+|+.+........+.+...+. . .+.
T Consensus 180 ~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~~al~~~~~--------------------------~------rI~ 227 (345)
T COG1816 180 SGYPPELFVSLFKLARDNGLKLTIHAGEAGGPESIRDALDLLGA--------------------------E------RIG 227 (345)
T ss_pred ccCCHHHHHHHHHHHHHcCceEEEeccccCCcHHHHHHHHHhch--------------------------h------hhc
Confidence 34578999999999999999999999643322222222111111 1 133
Q ss_pred eccC-HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc--cceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 290 HVMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA--AKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 290 h~~~-~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
|..- ..+.+.+.++.+.++++..||.+. ..++ ..+.. -++++++++|+++++.|
T Consensus 228 HGi~~~~d~~L~~~l~~~qI~levCP~SN-------------i~~~~v~~~~~----------hPf~~~~d~Gv~VsLnT 284 (345)
T COG1816 228 HGIRAIEDPELLYRLAERQIPLEVCPLSN-------------IQLGVVPSLAK----------HPFKKLFDAGVKVSLNT 284 (345)
T ss_pred cccccccCHHHHHHHHHhCCeeEECCcch-------------hhcccccchhh----------CcHHHHHHcCCceEEcC
Confidence 3322 122377888999999999999873 1111 11111 23899999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
|.+.... + .+......+....+++..|+-+. +.|+=+.-+++
T Consensus 285 Ddp~~f~----------------~-----~l~~Ey~~aa~~~~l~~~dl~~~-arnav~~af~~ 326 (345)
T COG1816 285 DDPLYFG----------------T-----PLIEEYLVAAQIYGLSREDLCEL-ARNAVEAAFIS 326 (345)
T ss_pred CChhhcC----------------C-----chHHHHHHHHHHhCCCHHHHHHH-HHHHHHHccCC
Confidence 9775422 1 11222223334455988887774 66766666653
No 142
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=96.55 E-value=0.0026 Score=42.88 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=20.7
Q ss_pred eEEEEEEECCEEEEECCeeeccCCCceEeec
Q 009282 476 GKVEVTIAGGRVVWENDELNVVPGSGKYIEM 506 (538)
Q Consensus 476 ~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~ 506 (538)
.-|.+|||||++++++|+++... .|++|++
T Consensus 18 ~GI~~V~VNG~~vv~~g~~t~~~-~G~~lrr 47 (48)
T PF07908_consen 18 EGIDYVFVNGQIVVEDGEVTGAR-PGRVLRR 47 (48)
T ss_dssp BSEEEEEETTEEEECTTEESSS-----B---
T ss_pred CCEEEEEECCEEEEECCeECCCC-CCeEecC
Confidence 35999999999999999988765 8999885
No 143
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=96.55 E-value=0.32 Score=47.27 Aligned_cols=176 Identities=19% Similarity=0.188 Sum_probs=100.4
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+....++++...+.|..++++.....+. ..+.+.+..+++.|.++|+++.+|........ +... +|
T Consensus 112 ~~a~~E~er~v~~~gf~g~~l~p~~~~~-~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~---------~~~~--~~-- 177 (293)
T COG2159 112 EAAAEELERRVRELGFVGVKLHPVAQGF-YPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA---------GLEK--GH-- 177 (293)
T ss_pred HHHHHHHHHHHHhcCceEEEecccccCC-CCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc---------cccc--CC--
Confidence 4567788888877899999885443332 23566689999999999999999985432110 0000 00
Q ss_pred cCCchHHHHHHHHHHHHHHHc-CCCEEEEecc--CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccccccee
Q 009282 262 SRPPLLEGEATTRAIRLAEFV-NTPLYVVHVM--SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~-~~~~~~~h~~--~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
..| ..+-.++..+ ..++++.|+. ..-..+.+. ++...-++...... ...+
T Consensus 178 ~~p--------~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~-~a~~~~nvy~d~s~------------------~~~~ 230 (293)
T COG2159 178 SDP--------LYLDDVARKFPELKIVLGHMGEDYPWELEAIE-LAYAHPNVYLDTSG------------------VRPK 230 (293)
T ss_pred CCc--------hHHHHHHHHCCCCcEEEEecCCCCchhHHHHH-HHHhCCCceeeeec------------------cccc
Confidence 011 1122334444 7899999997 333223333 33333344333221 0011
Q ss_pred ecCCCCCcccHHHHHHHHh-cCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 339 MSPPIRASGHNKALQAALA-TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~-~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
+.++ ..+..+.+ -.-++.+|||.+...+. ..+ ..+...+++.+..-+
T Consensus 231 ~~~~-------~~~~~~~~~~~dkilFGSD~P~~~~~------------------------~~l-~~~~~l~l~~e~k~k 278 (293)
T COG2159 231 YFAP-------PLLEFLKELGPDKILFGSDYPAIHPE------------------------VWL-AELDELGLSEEVKEK 278 (293)
T ss_pred cCCh-------HHHHHHHhcccCeEEecCCCCCcCHH------------------------HHH-HHHHhcCCCHHHHHH
Confidence 1111 11333444 24489999996544322 111 223445588888889
Q ss_pred HHhHhHHHHcCCC
Q 009282 418 LTSTECARIFNVY 430 (538)
Q Consensus 418 ~aT~~~A~~lg~~ 430 (538)
..-.|+++++|++
T Consensus 279 iL~~NA~rll~l~ 291 (293)
T COG2159 279 ILGENAARLLGLD 291 (293)
T ss_pred HHHHhHHHHhCcC
Confidence 9999999999984
No 144
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=96.55 E-value=0.51 Score=49.07 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
+.++.++++++.+-.||.+......-.++. .-++..++++|++++++||.+..
T Consensus 363 ~l~~~vke~~I~lEvCP~SN~~l~~v~~~~---------------------~HPl~~lla~Gvpv~InSDDP~~ 415 (479)
T TIGR01431 363 LVLQMLKERNIAVEVNPISNQVLQLVADLR---------------------NHPCAYLFADNYPMVISSDDPAF 415 (479)
T ss_pred HHHHHHHHhCCeEEECccchhhhcccCCcc---------------------cChHHHHHHCCCcEEEeCCCccc
Confidence 788899999999999999744322111111 13378999999999999997643
No 145
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=96.49 E-value=0.0043 Score=49.00 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=31.0
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN 86 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~ 86 (538)
..|++|+|+.|+|..++..++|-|+||||+.||..
T Consensus 65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkA 99 (121)
T PF00449_consen 65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKA 99 (121)
T ss_dssp C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-E
T ss_pred cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEecc
Confidence 56899999999999888999999999999999974
No 146
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=95.96 E-value=0.26 Score=48.70 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=80.8
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.-.+..++..+.+.|+.+.+|+.+...-... ++.++++ ++. -.+.|..
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~---------------------------v~~~LD~---l~~-~RIGHG~ 273 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNGGASV---------------------------VKNALDL---LGT-ERIGHGY 273 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCCChHH---------------------------HHHHHHh---hCC-ccccCce
Confidence 45556666666666899999999433111111 2222220 111 0244443
Q ss_pred CH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 293 SM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 293 ~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
.. .+..++.+++..++.+..||.+....-.- ..+. .-.+..++++|+++.|+||.+.+
T Consensus 274 ~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~v-----------~d~r----------nhp~~~~~~~~vP~vI~sDDP~~ 332 (399)
T KOG1097|consen 274 FLTKDPELINLLKSRNIALEICPISNQVLGLV-----------SDLR----------NHPVARLLAAGVPVVINSDDPGF 332 (399)
T ss_pred eccCCHHHHHHHHhcCceEEEccchhhheecc-----------cccc----------ccHHHHHHhCCCCEEEeCCCccc
Confidence 22 12267888999999999999874332111 1111 13378899999999999997633
Q ss_pred ChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
++..++...+...+.. ...+++..+..+ +..|+++.--+.
T Consensus 333 ----------------f~~~~Lt~dfy~A~~~--~~~~~~~~~l~~-la~nai~~S~l~ 372 (399)
T KOG1097|consen 333 ----------------FGAAPLTLDFYLAFLG--IAPNLDLRELKR-LALNAIKYSFLS 372 (399)
T ss_pred ----------------ccCccccHHHHHHHHh--ccccCCHHHHHH-HHHHHhhhccCC
Confidence 2222222222222211 111477777655 567777766653
No 147
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=94.42 E-value=2.6 Score=39.63 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=44.1
Q ss_pred HHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 351 ALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 351 ~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.+..+.+.|+++.++||...... +. ...... .+....|++.++++.+.+.+|.+++..-
T Consensus 159 ~~~~~~~~g~piiisSdAh~~~~----------------l~----~~~~~~-~l~~~~Gl~~~~~~~~~~~~~~~i~~~~ 217 (237)
T PRK00912 159 NLALARKYDFPLVLTSGAMSCYD----------------LR----SPREMI-ALAELFGMEEDEALKALSYYPESIIKKN 217 (237)
T ss_pred HHHHHHhcCCCEEEeCCCCcccc----------------cC----CHHHHH-HHHHHcCCCHHHHHHHHHHhHHHHHHhh
Confidence 34556667999999999542210 10 122222 3445667999999999999999998762
Q ss_pred -CCCcccccCC
Q 009282 431 -PRKGAILVGS 440 (538)
Q Consensus 431 -~~~GsI~~Gk 440 (538)
.+.+.|..|.
T Consensus 218 ~~~~~~~~~~~ 228 (237)
T PRK00912 218 RNRKNYVIEGV 228 (237)
T ss_pred ccCCCcccccE
Confidence 2334454443
No 148
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=90.74 E-value=3.6 Score=37.04 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=29.3
Q ss_pred cccccccccccc-CCCCChhhHHHHHHHHHhCCcEEEeccc
Q 009282 107 GIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHIDFV 146 (538)
Q Consensus 107 lID~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~d~~ 146 (538)
+||+|+|+.-.. .|..+.+.-...++.+.+.|||+++.+.
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTs 41 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATS 41 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecc
Confidence 589999987652 2344555555667888999999999664
No 149
>PRK08609 hypothetical protein; Provisional
Probab=89.58 E-value=33 Score=36.87 Aligned_cols=38 Identities=18% Similarity=0.043 Sum_probs=27.3
Q ss_pred eecccc-------ccccccccccCCCCChhhHHHHHHHHHhCCcEEEec
Q 009282 103 VMPGGI-------DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHID 144 (538)
Q Consensus 103 v~PGlI-------D~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d 144 (538)
-+|=|| |.|+|...+ + ....+....+.+.+.|++.+.-
T Consensus 324 ~lp~lv~~~d~~~DlH~HT~~s--D--g~~sleemv~~A~~~Gl~~i~i 368 (570)
T PRK08609 324 DLSNLITLSDIQGDLHMHTTWS--D--GAFSIEEMVEACIAKGYEYMAI 368 (570)
T ss_pred hchhhhhhHhhcCCccccCCCC--C--CCCCHHHHHHHHHHCCCCEEEE
Confidence 456665 999999765 2 2334555688899999998873
No 150
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=89.56 E-value=19 Score=34.19 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 214 DELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
.+.+++.++..+++|+++..+....
T Consensus 123 a~~~r~~~~rL~~~gl~fdl~~~~~ 147 (279)
T COG3618 123 APAWRANVERLAKLGLHFDLQVDPH 147 (279)
T ss_pred hHHHHHHHHHHHhcCCeEEEEeChh
Confidence 4688888888899999888887543
No 151
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=88.17 E-value=0.16 Score=52.13 Aligned_cols=15 Identities=67% Similarity=0.897 Sum_probs=12.6
Q ss_pred eeecccccccccccc
Q 009282 102 FVMPGGIDPHTHLAM 116 (538)
Q Consensus 102 ~v~PGlID~H~H~~~ 116 (538)
+|+|||||+|+|+..
T Consensus 1 ~v~PGfiD~H~H~~~ 15 (404)
T PF07969_consen 1 TVMPGFIDSHTHLDS 15 (404)
T ss_dssp EEEE-EEEEEEEHTT
T ss_pred CCccChhHHhhChHH
Confidence 589999999999875
No 152
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=85.10 E-value=34 Score=32.19 Aligned_cols=68 Identities=19% Similarity=0.261 Sum_probs=46.6
Q ss_pred HHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 350 ~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
..+.++++.|-.+.+-||+.--... |..+-+ --..+.-.+.+...+.++.+.+.+..-.||.+++|+
T Consensus 216 ~~v~~a~~~g~~FmmETDyIDDp~R------------pgavL~-PktVPrr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~ 282 (285)
T COG1831 216 KNVEDAAELGPRFMMETDYIDDPRR------------PGAVLG-PKTVPRRTREILEKGDLTEEDVYRIHVENPERVYGI 282 (285)
T ss_pred HHHHHHHhcCCceEeecccccCccc------------CCCcCC-ccchhHHHHHHHHhcCCcHHHHHHHHHhCHHHHhCc
Confidence 3588999999999999996522111 111111 112344444566788899999999999999999998
Q ss_pred C
Q 009282 430 Y 430 (538)
Q Consensus 430 ~ 430 (538)
+
T Consensus 283 ~ 283 (285)
T COG1831 283 E 283 (285)
T ss_pred c
Confidence 4
No 153
>PRK06361 hypothetical protein; Provisional
Probab=83.57 E-value=15 Score=33.68 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=39.6
Q ss_pred HHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 351 ALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 351 ~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
.+..+.+.|++++++||... +.. -..+.. ...+....|++.++++.+.+.||+.+++.
T Consensus 153 ~l~~a~~~gi~vv~~SDaH~--~~d------------------~~~~~~-~~~i~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 153 VARIAREAGAPLVINTDTHA--PSD------------------LITYEF-ARKVALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred HHHHHHHhCCcEEEECCCCC--HHH------------------HHHHHH-HHHHHcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 34556667999999999651 110 001122 22344667799999999999999999875
No 154
>PRK08392 hypothetical protein; Provisional
Probab=83.57 E-value=36 Score=31.28 Aligned_cols=179 Identities=15% Similarity=0.031 Sum_probs=85.8
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHhCCcEEEec--ccCCCC-CCHHHHHHHHHHHhcc--cceeeeeeeeeecCCh
Q 009282 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHID--FVIPIN-GSLTAGFEAYEKKAKN--SCMDYGFHMAITKWDE 182 (538)
Q Consensus 108 ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d--~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 182 (538)
||.|+|...+ .+..+ +......+.+.|++.+.- ...... ......++...+.... ..+-.|.-......
T Consensus 1 ~D~H~HT~~s-d~~~~---~~e~v~~A~~~Gl~~i~iTdH~~~~~~~~~~~y~~~i~~l~~~~~i~il~GiE~~~~~~-- 74 (215)
T PRK08392 1 MDLHTHTVYS-DGIGS---VRDNIAEAERKGLRLVGISDHIHYFTPSKFNAYINEIRQWGEESEIVVLAGIEANITPN-- 74 (215)
T ss_pred CccccCCCCc-CCcCC---HHHHHHHHHHcCCCEEEEccCCCccchhhHHHHHHHHHHHhhccCceEEEeEEeeecCC--
Confidence 7999998776 23333 445578899999998762 211111 1222333333322222 22223332222221
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
.......+.+ ..+.+-..+........-.+.+..+.+.+......+.+|...... . ..
T Consensus 75 -~~~~~~~~~~--~~D~vI~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~----------~--~~------- 132 (215)
T PRK08392 75 -GVDITDDFAK--KLDYVIASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFP----------Y--IG------- 132 (215)
T ss_pred -cchhHHHHHh--hCCEEEEEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCcccc----------C--CC-------
Confidence 1223333332 344443222211000001244455566666667788888532100 0 00
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccc
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
.+ ..+.+.++++.+.+.|..+-+.-.......+.++.+++.|++++...-+|
T Consensus 133 ~~---~~~~~~~i~~~~~~~g~~lEiNt~~~~p~~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 133 YP---SEEELKEILDLAEAYGKAFEISSRYRVPDLEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred Cc---hHHHHHHHHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 00 12456777777777776665432111122367888899998887665543
No 155
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=82.71 E-value=48 Score=32.02 Aligned_cols=179 Identities=16% Similarity=0.136 Sum_probs=95.4
Q ss_pred EecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHh-cccceeeeee
Q 009282 96 LDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA-KNSCMDYGFH 174 (538)
Q Consensus 96 ID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 174 (538)
.|..-..--|.|+|+|.|+... . ...+.......+...||.-++.+++... .....++ ..+.. +..+..+|.+
T Consensus 7 ~d~~~~~~~~~~~~~~~~~~~~--~--~~~d~s~v~~~a~~~~v~~~~v~gt~~~-d~~~~~~-l~~~y~~~v~~t~G~H 80 (296)
T KOG3020|consen 7 LDDGRNFTNPMLEDIYCHIQAH--P--SDSDASQVLERAVQAGVSKLIVTGTSLK-DSKEALE-LAEKYPGSVYPTFGVH 80 (296)
T ss_pred hhhhhhhcchhhchhhhccccC--C--CCccchHHHHHHHhccceEEEEeCCCcc-hHHHHHH-HHhhCCCceeeccCcC
Confidence 3444556667899999998776 2 1222223367788899999988766322 2333333 33333 2333334433
Q ss_pred eeeec-CC-----hhhHHHHHHHHHH---cCCcEEEE-EeeeCCCccC----CHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009282 175 MAITK-WD-----EVVSDEMEVMVKE---KGINSFKF-FMAYKGSFMI----NDELLIEGFKRCKSLGALAMVHAENGDA 240 (538)
Q Consensus 175 ~~~~~-~~-----~~~~~~~~~~~~~---~g~~~ik~-~~~~~~~~~~----~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (538)
..... +. +...+.+..+... ...-.++. .+++...... ....+++.++.|.+..+|+.+|+....
T Consensus 81 P~~~~~~~~~~~~~~~~~~L~~~~~~~~~~k~vAiGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~a~- 159 (296)
T KOG3020|consen 81 PHFSQEFSDQSRKEKFLDTLLSIIENGFLPKVVAIGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRSAH- 159 (296)
T ss_pred CCcccchhhccchhhHHHHHHHHHhhcccCCeEEeeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechhhh-
Confidence 22111 11 1345666666633 11122221 1122111112 245567888999999999999997642
Q ss_pred HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEE
Q 009282 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVI 311 (538)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~ 311 (538)
.+.++.+.+.+-. -.+-.+.|+.+... +++..+.+.++.+.
T Consensus 160 -~d~~eIl~~~~~~----------------------------~~~~vvvHsFtGs~-e~~~~~lk~~~yig 200 (296)
T KOG3020|consen 160 -EDLLEILKRFLPE----------------------------CHKKVVVHSFTGSA-EEAQKLLKLGLYIG 200 (296)
T ss_pred -HHHHHHHHHhccc----------------------------cCCceEEEeccCCH-HHHHHHHHccEEec
Confidence 2333333222211 01025788888776 78888888884443
No 156
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=82.42 E-value=7.8 Score=40.36 Aligned_cols=91 Identities=9% Similarity=0.001 Sum_probs=56.0
Q ss_pred HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhh
Q 009282 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (538)
.....++..++.+..||.+....+ ..+.- -++..+++.|++++|+||.+.....
T Consensus 363 ~L~~l~~~~qI~levCPlSN~~l~-------------~~~~~----------HP~~~~l~~Gl~VsInTDDPl~f~~--- 416 (496)
T cd01319 363 VLQYLYYLTQIGIAMSPLSNNSLF-------------LSYEK----------NPFPEFFKRGLNVSLSTDDPLQFHF--- 416 (496)
T ss_pred HHHHHHHHcCCeEEEecCccHhhh-------------cCccc----------ChHHHHHHCCCeEEEeCCCchhhCC---
Confidence 344456778999999998743210 11211 2388999999999999997633110
Q ss_pred cCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 378 FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 378 ~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. ...+...+..+....++|..+..+ +..|+.++-+.+
T Consensus 417 -------------t--~~~L~eEY~~a~~~~~Ls~~Dl~e-LarNSV~~Sf~~ 453 (496)
T cd01319 417 -------------T--KEPLMEEYSIAAQVWKLSTCDMCE-LARNSVLQSGFE 453 (496)
T ss_pred -------------C--CCcHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHhCCC
Confidence 0 011333333344555799987755 577887777774
No 157
>PLN03055 AMP deaminase; Provisional
Probab=81.89 E-value=7.8 Score=41.16 Aligned_cols=91 Identities=11% Similarity=0.021 Sum_probs=58.3
Q ss_pred HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhh
Q 009282 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (538)
.....++..++.+..||.+....+ ..+. .-++..++++|++++|+||.+.....
T Consensus 453 ~L~yl~~~~qI~LevCPlSN~~l~-------------~~y~----------~HP~~~~~~~Gl~VSInTDDPl~f~t--- 506 (602)
T PLN03055 453 GLQYLYYLAQIGLAMSPLSNNSLF-------------LDYH----------RNPFPMFFARGLNVSLSTDDPLQIHL--- 506 (602)
T ss_pred HHHHHHHHcCCeEEEccCcchhhc-------------cchh----------hChHHHHHHCCCEEEEcCCCcchhcC---
Confidence 666778889999999998743110 1111 13388999999999999997643110
Q ss_pred cCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 378 FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 378 ~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. ...+...+..+....++|..+..+ .+.|+.++-+++
T Consensus 507 -------------T--~epL~eEY~~aa~~~~LS~~DL~e-LarNSV~~Sf~~ 543 (602)
T PLN03055 507 -------------T--KEPLVEEYSIAAQVWKLSSCDLCE-IARNSVLQSGFP 543 (602)
T ss_pred -------------C--CCcHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHhcCC
Confidence 0 001233333344555699988865 478888877774
No 158
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=80.71 E-value=43 Score=33.59 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=68.3
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
+.-...+..+|++.++-+-.-++. ++..++++..+.+........+..+....-+-..+-.+++. +.|++.+-+- +.
T Consensus 101 e~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~-~~g~DSIciK-Dm 178 (472)
T COG5016 101 EKFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELL-EMGVDSICIK-DM 178 (472)
T ss_pred HHHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHH-HcCCCEEEee-cc
Confidence 444567789999998854323333 55666666665554322222222222222233344445555 7888877442 22
Q ss_pred CCCccCCHHHHHHHHHHHH-hcCCeEEEEcCChh-hHHHHHHHHHHcCCCC
Q 009282 207 KGSFMINDELLIEGFKRCK-SLGALAMVHAENGD-AVFEGQKRMIELGITG 255 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~-~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~ 255 (538)
.| ..++....+++...+ ..++++..|+.... ......-...+.|+..
T Consensus 179 aG--lltP~~ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~ 227 (472)
T COG5016 179 AG--LLTPYEAYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDG 227 (472)
T ss_pred cc--cCChHHHHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcch
Confidence 22 346777777777775 56899998884432 2223333455666653
No 159
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=79.79 E-value=21 Score=38.14 Aligned_cols=91 Identities=12% Similarity=0.023 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhh
Q 009282 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (538)
.....+...++.+..||.+... ....+. .-++..++++|++++++||.+.....
T Consensus 475 ~L~yl~~~~qI~LevCPtSN~~-------------l~~~y~----------~HP~~~~~~~Gl~VSLsTDDPl~f~~--- 528 (611)
T TIGR01429 475 VLQYLYYLTQIPIAMSPLSNNS-------------LFLEYS----------KNPLPEYLHKGLNVSLSTDDPLQFHY--- 528 (611)
T ss_pred HHHHHHHHcCCeEEEcCCcchh-------------hccChh----------hChHHHHHHCCCeEEEcCCCchhhCC---
Confidence 4455567899999999987421 001121 12388999999999999997633110
Q ss_pred cCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 378 FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 378 ~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. ...+...+..+....+++..+..++ ..|+.+.-+.+
T Consensus 529 -------------T--~epL~EEY~~aa~~~~Ls~~Dl~eL-arNSV~~S~~~ 565 (611)
T TIGR01429 529 -------------T--KEALMEEYAIAAQVWKLSTCDMCEL-ARNSVLQSGFE 565 (611)
T ss_pred -------------C--CCcHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHhCCC
Confidence 0 0113333334445567999887774 67887777774
No 160
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=77.80 E-value=59 Score=34.99 Aligned_cols=124 Identities=12% Similarity=0.073 Sum_probs=70.3
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+..-.+.+..+|+..++-+...++. +....++...+.+......+++... +..+.+...++.+.+.+.|++.+.+- +
T Consensus 98 v~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~s-p~~t~e~~~~~ak~l~~~Gad~I~Ik-D 175 (596)
T PRK14042 98 VRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTTS-PVHTLDNFLELGKKLAEMGCDSIAIK-D 175 (596)
T ss_pred HHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecCC-CCCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 3445677899999998855433333 4555666666655433333333332 22334444444443337899877542 2
Q ss_pred eCCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHH-HHHHHHHHcCCC
Q 009282 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVF-EGQKRMIELGIT 254 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~~-~~~~~~~~~g~~ 254 (538)
.. -..++..+.+++...++ .++++..|+++..... ...-.+.+.|..
T Consensus 176 ta--G~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGad 224 (596)
T PRK14042 176 MA--GLLTPTVTVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGCN 224 (596)
T ss_pred cc--cCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCCC
Confidence 22 23568888888877664 5899999996643322 222334566654
No 161
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=77.54 E-value=27 Score=34.78 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=72.3
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEee-eC---CCccCCHHHHHHHHHHHHhcCCeEEEEc------CChhhHHHHHHHHHHc
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMA-YK---GSFMINDELLIEGFKRCKSLGALAMVHA------ENGDAVFEGQKRMIEL 251 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~-~~---~~~~~~~~~l~~~~~~A~~~g~~v~~H~------~~~~~~~~~~~~~~~~ 251 (538)
...+..++... +.|++.+=+... +. ....++.+++++.++.||++|+++.+-. .........++.+.+.
T Consensus 13 ag~l~~l~~ai-~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~ 91 (347)
T COG0826 13 AGNLEDLKAAI-AAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVEL 91 (347)
T ss_pred CCCHHHHHHHH-HcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHc
Confidence 34466666666 677777643322 11 1134788999999999999999666544 2233345777788888
Q ss_pred CCCCcccccccCCchHHHHHHHHHHHHHHHcC--CCEEEEeccCHHHHHHHHHHHHcCCcE
Q 009282 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDAMEEIAKARKAGQRV 310 (538)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~h~~~~~~~~~i~~~~~~g~~v 310 (538)
|.....- +-..++.++.+.+ .++|..+-.+....+.+..+++.|...
T Consensus 92 GvDaviv------------~Dpg~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~~G~~r 140 (347)
T COG0826 92 GVDAVIV------------ADPGLIMLARERGPDLPIHVSTQANVTNAETAKFWKELGAKR 140 (347)
T ss_pred CCCEEEE------------cCHHHHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHHcCCEE
Confidence 8765321 1123455566555 777777666655557777777777443
No 162
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=76.98 E-value=66 Score=33.78 Aligned_cols=125 Identities=12% Similarity=0.035 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+..-.+.+..+|+..++-....++. +....++...+.+......+++.... ..+.+...++.+.+.+.|++.+.+- +
T Consensus 99 v~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~sp-~~t~e~~~~~a~~l~~~Gad~I~Ik-D 176 (499)
T PRK12330 99 VDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTVSP-IHTVEGFVEQAKRLLDMGADSICIK-D 176 (499)
T ss_pred HHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEecCC-CCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 3445677889999988754333322 34445555554443322233333222 2233444444333337899887542 2
Q ss_pred eCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCChhh-HHHHHHHHHHcCCCC
Q 009282 206 YKGSFMINDELLIEGFKRCKSL---GALAMVHAENGDA-VFEGQKRMIELGITG 255 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~~~~-~~~~~~~~~~~g~~~ 255 (538)
.. -..++....+++...++. ++++..|+++... .-...-...+.|...
T Consensus 177 ta--Gll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAieAGad~ 228 (499)
T PRK12330 177 MA--ALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIEAGVDV 228 (499)
T ss_pred Cc--cCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHHcCCCE
Confidence 22 235788888888887654 6899999965432 222333455667653
No 163
>PTZ00310 AMP deaminase; Provisional
Probab=76.39 E-value=12 Score=43.54 Aligned_cols=92 Identities=10% Similarity=0.022 Sum_probs=55.1
Q ss_pred HHHHH-HHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhh
Q 009282 298 EEIAK-ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQK 376 (538)
Q Consensus 298 ~~i~~-~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~ 376 (538)
..+.. +...++.+..||.+...... ..+. .-++..++++|+++++.||.+.....
T Consensus 515 p~LqyL~~e~qI~LeVCPlSN~~l~v------------~sy~----------~HPi~~fl~~GL~VSLNTDDPl~F~t-- 570 (1453)
T PTZ00310 515 PVLQYLCGLHRVGLTVSPLRDHALSI------------TAYF----------DHPLPKFLHRCLRVSISTSDPLYFHH-- 570 (1453)
T ss_pred HHHHHHHHHcCCeEEECCCcccccCC------------Cchh----------hCcHHHHHHCCCEEEECCCCccccCC--
Confidence 33433 44889999999987322211 1121 13389999999999999997644111
Q ss_pred hcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 377 AFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 377 ~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. ...+...+..+....+++..|..++ +.|+..+-+++
T Consensus 571 --------------t--~EpL~EEY~iaaq~~gLS~~DL~eL-arNSV~aSf~~ 607 (1453)
T PTZ00310 571 --------------H--SQPLIEEYATAMKLFSLSPLDTTEL-ARNSVLNSSFP 607 (1453)
T ss_pred --------------C--CccHHHHHHHHHHHhCcCHHHHHHH-HHHHHHHhCCC
Confidence 0 0123333334445667888877764 66766666653
No 164
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=76.33 E-value=93 Score=32.37 Aligned_cols=123 Identities=11% Similarity=0.024 Sum_probs=67.3
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..-.+.+..+|+..++-....++. +....++...+.+.......++... +..+.+...++.+.+.+.|++.+-+- +.
T Consensus 108 ~~fv~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~s-p~~t~~y~~~~a~~l~~~Gad~I~Ik-Dt 185 (468)
T PRK12581 108 DKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTTS-PVHTLNYYLSLVKELVEMGADSICIK-DM 185 (468)
T ss_pred HHHHHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEeC-CcCcHHHHHHHHHHHHHcCCCEEEEC-CC
Confidence 344677889999999865433332 4555555555554332222222221 11233333333333337899877552 22
Q ss_pred CCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChhhH-HHHHHHHHHcCCC
Q 009282 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAV-FEGQKRMIELGIT 254 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~-~~~~~~~~~~g~~ 254 (538)
. -..+++.+.+++...++ .++++..|+++.... -...-.+.+.|..
T Consensus 186 a--G~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~GlA~An~laAieAGad 233 (468)
T PRK12581 186 A--GILTPKAAKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGAD 233 (468)
T ss_pred C--CCcCHHHHHHHHHHHHhccCCeEEEEeCCCCccHHHHHHHHHHcCCC
Confidence 2 23568888888877765 468899998654322 2222344566765
No 165
>PRK01060 endonuclease IV; Provisional
Probab=75.50 E-value=62 Score=31.00 Aligned_cols=91 Identities=15% Similarity=0.124 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCc---cCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~A~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
.+.-+.+++.|.+.+-++...+..+ ..+.+.++++-+.++++|+. +..|...... .. +
T Consensus 15 ~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~n------------l~----~ 78 (281)
T PRK01060 15 EGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLIN------------LG----N 78 (281)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEec------------CC----C
Confidence 3343444488999999987654332 45778888888999999998 8888753100 00 0
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
....-.....+.+.+.++++..+|.+.+..|..
T Consensus 79 ~d~~~r~~s~~~~~~~i~~A~~lga~~vv~h~G 111 (281)
T PRK01060 79 PNKEILEKSRDFLIQEIERCAALGAKLLVFHPG 111 (281)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 000001123466888999999999998887865
No 166
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=73.84 E-value=66 Score=29.26 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=74.8
Q ss_pred CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhccccee----eeeeeeeecCChhhHHHHHHHHHHcC
Q 009282 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD----YGFHMAITKWDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (538)
..+.+++......+..+|+..++... ..+....+......+. .+|..+. ...+....++++.. +.|
T Consensus 13 ~~t~~~i~~~~~~a~~~~~~av~v~p--------~~v~~~~~~l~~~~~~v~~~~~fp~g~-~~~~~k~~eve~A~-~~G 82 (203)
T cd00959 13 DATEEDIRKLCDEAKEYGFAAVCVNP--------CFVPLAREALKGSGVKVCTVIGFPLGA-TTTEVKVAEAREAI-ADG 82 (203)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcH--------HHHHHHHHHcCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHH-HcC
Confidence 45778888888889999999888431 1222222221111122 2222211 22344566677777 789
Q ss_pred CcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHH
Q 009282 197 INSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (538)
Q Consensus 197 ~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i 272 (538)
++.+.+.+++. +.+....+++.++.++|+ |+++.+=.+.... ..+.+
T Consensus 83 Adevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~--g~~lkvI~e~~~l---------------------------~~~~i 133 (203)
T cd00959 83 ADEIDMVINIGALKSGDYEAVYEEIAAVVEACG--GAPLKVILETGLL---------------------------TDEEI 133 (203)
T ss_pred CCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcC--CCeEEEEEecCCC---------------------------CHHHH
Confidence 99999877653 222223556666667665 6766553333211 02457
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 009282 273 TRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 273 ~~~l~~~~~~~~~~~~~h 290 (538)
..+.+++.+.|..++=+-
T Consensus 134 ~~a~ria~e~GaD~IKTs 151 (203)
T cd00959 134 IKACEIAIEAGADFIKTS 151 (203)
T ss_pred HHHHHHHHHhCCCEEEcC
Confidence 777778888887775543
No 167
>PLN02768 AMP deaminase
Probab=72.68 E-value=14 Score=40.49 Aligned_cols=91 Identities=10% Similarity=-0.010 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhh
Q 009282 298 EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKA 377 (538)
Q Consensus 298 ~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~ 377 (538)
.....+...++.+..||.+... ....+. .-++..++++|++++|.||.+.....
T Consensus 686 ~LqyL~~l~qIgLevCPlSN~~-------------l~~~y~----------~HPf~~f~~~GL~VSLNTDDPL~fht--- 739 (835)
T PLN02768 686 VLQYLYYLAQIGLAMSPLSNNS-------------LFLDYH----------RNPFPMFFLRGLNVSLSTDDPLQIHL--- 739 (835)
T ss_pred HHHHHHHHcCCeEEECCCcchh-------------hhcchh----------hChHHHHHHCCCEEEEcCCCccccCC---
Confidence 5555667789999999987431 111121 23389999999999999997643110
Q ss_pred cCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 378 FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 378 ~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. ...+...+..+.+..+++..+..++ +.|+...-+++
T Consensus 740 -------------T--~epL~EEYsvAak~~~LS~~DL~EL-arNSV~aSff~ 776 (835)
T PLN02768 740 -------------T--KEPLVEEYSIAASVWKLSSCDLCEI-ARNSVYQSGFS 776 (835)
T ss_pred -------------C--CCCHHHHHHHHHHHhCcCHHHHHHH-HHHHHHHhcCC
Confidence 0 0113333334445667999887774 77887777774
No 168
>PRK07945 hypothetical protein; Provisional
Probab=70.66 E-value=1.2e+02 Score=30.21 Aligned_cols=33 Identities=21% Similarity=-0.005 Sum_probs=25.1
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
.+|.|+|...+ + ....+....+.+.+.|++.+.
T Consensus 97 ~~D~H~HT~~S--d--g~~~~ee~v~~Ai~~Gl~~i~ 129 (335)
T PRK07945 97 RGDLHTHSDWS--D--GGSPIEEMARTAAALGHEYCA 129 (335)
T ss_pred hhhcccccCCC--C--CCCCHHHHHHHHHHCCCCEEE
Confidence 58999999876 2 233455568999999999876
No 169
>PTZ00310 AMP deaminase; Provisional
Probab=70.01 E-value=20 Score=42.00 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=62.1
Q ss_pred EEeccCH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 288 VVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 288 ~~h~~~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
+.|.... .+......+...++.+..||.+....+ ..+.-. ++..++++|++++|+|
T Consensus 1135 IgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~-------------~sy~~h----------P~~~f~~~Gl~VSLnT 1191 (1453)
T PTZ00310 1135 ICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALF-------------LAFLEN----------PFPVFFHRGLNVSLST 1191 (1453)
T ss_pred ccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhh-------------hchhhC----------cHHHHHHCCCEEEECC
Confidence 4454433 222555567788999999998742110 122222 2889999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
|.+.....- ...+...+..+....+++..+..++ ..|+...-|.+
T Consensus 1192 DDPl~f~tT------------------~EpL~eEYsiaa~~~~LS~~Dl~el-arNSV~~SGf~ 1236 (1453)
T PTZ00310 1192 DDPLMFHQT------------------QEPLIEEYSIAARVWGLSLNDLCEI-ARNSVLQSGFD 1236 (1453)
T ss_pred CCccccCCC------------------cccHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHcCCC
Confidence 976442110 0113333334445667999988774 78888777774
No 170
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=69.27 E-value=69 Score=30.43 Aligned_cols=63 Identities=13% Similarity=0.104 Sum_probs=41.1
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEee--eCCCccCC-HHH---HHHHHHHHHhc-CCeEEEEcCChhhHHHHH
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMA--YKGSFMIN-DEL---LIEGFKRCKSL-GALAMVHAENGDAVFEGQ 245 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~--~~~~~~~~-~~~---l~~~~~~A~~~-g~~v~~H~~~~~~~~~~~ 245 (538)
++..+..+++. +.|++.+++... .++....+ .++ +..+++.+++. +.++.+|..+...++..+
T Consensus 23 ~~~~~~a~~~~-~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~al 92 (257)
T TIGR01496 23 DKAVAHAERML-EEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARAAL 92 (257)
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHHHH
Confidence 44556666666 789999998422 12322233 334 66777888776 999999998886554444
No 171
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=67.22 E-value=86 Score=30.27 Aligned_cols=106 Identities=5% Similarity=-0.068 Sum_probs=69.1
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHH-HHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+....+-+.+++.+...+-- ...........+.+..+ ...|++...|+.+|....... +.+..+++.|.++...
T Consensus 26 ~n~e~~~avi~AAee~~sPvIiq-~~~~~~~~~g~~~~~~~~~~~a~~~~VPValHLDH~~~~-e~i~~ai~~GftSVMi 103 (284)
T PRK12737 26 HNLETLQVVVETAAELRSPVILA-GTPGTFSYAGTDYIVAIAEVAARKYNIPLALHLDHHEDL-DDIKKKVRAGIRSVMI 103 (284)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-cCccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCeEEe
Confidence 34455555555554555544422 12111122344555554 457788999999999665543 4556777889987766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.....|.....+...+..++++..|..+-
T Consensus 104 DgS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12737 104 DGSHLSFEENIAIVKEVVEFCHRYDASVE 132 (284)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 66667888888889999999999887663
No 172
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=66.73 E-value=93 Score=30.06 Aligned_cols=106 Identities=7% Similarity=-0.045 Sum_probs=69.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+..+.+-+.+++.+...+-- ...........+.+..++ ..|++...||.+|.......+ .+..+.+.|.++...
T Consensus 26 ~n~e~~~avi~AAee~~sPvIlq-~s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~~e-~i~~ai~~GFtSVM~ 103 (286)
T PRK12738 26 HNAETIQAILEVCSEMRSPVILA-GTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLD-DIRRKVHAGVRSAMI 103 (286)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE-cCcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHHHHcCCCeEee
Confidence 44555666666665556654422 121111223445454444 567889999999997665544 555667889988766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.....|.....+...++.++++..|..+-
T Consensus 104 DgS~lp~eeNi~~T~evv~~Ah~~gv~VE 132 (286)
T PRK12738 104 DGSHFPFAENVKLVKSVVDFCHSQDCSVE 132 (286)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 66667888888888999999999887653
No 173
>PRK07328 histidinol-phosphatase; Provisional
Probab=66.72 E-value=1.2e+02 Score=28.91 Aligned_cols=47 Identities=15% Similarity=0.072 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEec--------cCHHHHHHHHHHHHcCCcEEEecccc
Q 009282 270 EATTRAIRLAEFVNTPLYVVHV--------MSMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~--------~~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
+.+.++++.+...|..+-+.-. ..+. .+.++++++.|++++...-+|
T Consensus 177 ~~~~~il~~~~~~g~~lEiNt~~~r~~~~~~yp~-~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 177 ELYEEALDVIAAAGLALEVNTAGLRKPVGEIYPS-PALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhcCCCCCCCCC-HHHHHHHHHcCCCEEEeCCCC
Confidence 4567777777777776655321 1122 378888899999887665554
No 174
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=66.56 E-value=92 Score=30.04 Aligned_cols=106 Identities=5% Similarity=-0.021 Sum_probs=69.0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+....+-+.+++.+...+-- ...........+.+..++ ..|++...||.+|....... +.+..+.+.|.++...
T Consensus 24 ~n~e~~~avi~AAee~~sPvIlq-~s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~~-e~i~~ai~~GFtSVM~ 101 (282)
T TIGR01858 24 HNLETIQAVVETAAEMRSPVILA-GTPGTFKHAGTEYIVALCSAASTTYNMPLALHLDHHESL-DDIRQKVHAGVRSAMI 101 (282)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-eCccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEee
Confidence 34455555555554555544422 222111223455555554 46788999999999665543 5566777889988766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.....|.....+...++.++++..|..+-
T Consensus 102 DgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 130 (282)
T TIGR01858 102 DGSHFPFAQNVKLVKEVVDFCHRQDCSVE 130 (282)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 66667888888889999999999887653
No 175
>PRK06852 aldolase; Validated
Probab=66.47 E-value=75 Score=30.94 Aligned_cols=86 Identities=10% Similarity=0.019 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcC------CcEEEEEeeeCCCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 185 SDEMEVMVKEKG------INSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 185 ~~~~~~~~~~~g------~~~ik~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
...+++.. +.| ++.+.+.+...+.. ....+.+.++.++|+++|+++.++..-... .+
T Consensus 118 ~~sVeeAv-rlG~~~~~~AdAV~v~v~~Gs~~E~~ml~~l~~v~~ea~~~GlPll~~~yprG~-----------~i---- 181 (304)
T PRK06852 118 LLDVEQVV-EFKENSGLNILGVGYTIYLGSEYESEMLSEAAQIIYEAHKHGLIAVLWIYPRGK-----------AV---- 181 (304)
T ss_pred eecHHHHH-hcCCccCCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHhCCcEEEEeeccCc-----------cc----
Confidence 34455655 556 67777654432211 113456778889999999999987632210 00
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
......+.+..+.+++.++|.+++=+-..
T Consensus 182 ------~~~~~~~~ia~aaRiaaELGADIVKv~y~ 210 (304)
T PRK06852 182 ------KDEKDPHLIAGAAGVAACLGADFVKVNYP 210 (304)
T ss_pred ------CCCccHHHHHHHHHHHHHHcCCEEEecCC
Confidence 00112356888889999999888766654
No 176
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=64.88 E-value=1.8e+02 Score=30.22 Aligned_cols=123 Identities=15% Similarity=0.065 Sum_probs=63.5
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..-.+.++.+|+..++-....++. +....++...+.+......+.+... +..+.+...++.+.+.+.|++.+.+- +.
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~~-p~~~~~~~~~~a~~l~~~Gad~I~i~-Dt 176 (448)
T PRK12331 99 ESFVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTTS-PVHTIDYFVKLAKEMQEMGADSICIK-DM 176 (448)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeecC-CCCCHHHHHHHHHHHHHcCCCEEEEc-CC
Confidence 344577889999987754333222 3333444333333221122222221 22333444443333337899887542 22
Q ss_pred CCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChhhH-HHHHHHHHHcCCC
Q 009282 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAV-FEGQKRMIELGIT 254 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~-~~~~~~~~~~g~~ 254 (538)
. -..++..+.+++...++ .++++..|+++.... -...-.+.+.|..
T Consensus 177 ~--G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad 224 (448)
T PRK12331 177 A--GILTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGAD 224 (448)
T ss_pred C--CCCCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCC
Confidence 2 23567888888877654 578999999654322 2222234566764
No 177
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=64.29 E-value=1.6e+02 Score=30.71 Aligned_cols=121 Identities=14% Similarity=0.061 Sum_probs=62.3
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeee-ecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
.-.+.++.+|+..++-....++. +....++...+.+. .+...+.... +..+.+...++.+.+.+.|++.+-+- +.
T Consensus 99 ~fv~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~--~v~~~i~~t~~p~~t~e~~~~~a~~l~~~Gad~I~i~-Dt 175 (467)
T PRK14041 99 LFVKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGA--HVQGAISYTVSPVHTLEYYLEFARELVDMGVDSICIK-DM 175 (467)
T ss_pred HHHHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCC--EEEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEC-Cc
Confidence 33677889999987754322221 33334433333332 2222221111 12233444444333337798877542 22
Q ss_pred CCCccCCHHHHHHHHHHHH-hcCCeEEEEcCChhhH-HHHHHHHHHcCCC
Q 009282 207 KGSFMINDELLIEGFKRCK-SLGALAMVHAENGDAV-FEGQKRMIELGIT 254 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~-~~g~~v~~H~~~~~~~-~~~~~~~~~~g~~ 254 (538)
.| ..++..+.+++...+ +.++++..|+++...+ -...-...+.|..
T Consensus 176 ~G--~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad 223 (467)
T PRK14041 176 AG--LLTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGAD 223 (467)
T ss_pred cC--CcCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCC
Confidence 22 346888888887765 4578899998654322 1222234566754
No 178
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=63.76 E-value=97 Score=29.90 Aligned_cols=106 Identities=7% Similarity=-0.059 Sum_probs=67.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHH-HHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+....+-+.+++.+...+--. ..........+.+..+ ...|++...|+.+|....... +.+..+++.|.++...
T Consensus 26 ~n~e~~~avi~AAee~~sPvIiq~-~~~~~~~~g~~~~~~~~~~~A~~~~VPV~lHLDHg~~~-e~i~~Ai~~GftSVM~ 103 (284)
T PRK09195 26 HNLETMQVVVETAAELHSPVIIAG-TPGTFSYAGTEYLLAIVSAAAKQYHHPLALHLDHHEKF-DDIAQKVRSGVRSVMI 103 (284)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEc-ChhHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEe
Confidence 344555555555545555444221 1111112344445544 457889999999999666544 5566677889987766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.....|.....+...++.++++..|..+-
T Consensus 104 DgS~l~~eeNi~~T~~vv~~Ah~~gv~VE 132 (284)
T PRK09195 104 DGSHLPFAQNISLVKEVVDFCHRFDVSVE 132 (284)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 66667778888888999999999886653
No 179
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=63.70 E-value=42 Score=32.06 Aligned_cols=90 Identities=18% Similarity=0.084 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCc---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
..+.... +.|.+.+.++...+... ..+.+.+.++.+.++++|+.+.+|...... ... ...
T Consensus 14 ~~~~~~~-~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~p~~~n------------l~s----~d~ 76 (273)
T smart00518 14 KAFIEAV-DIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHAPYLIN------------LAS----PDK 76 (273)
T ss_pred HHHHHHH-HcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCceec------------CCC----CCH
Confidence 3445555 78999999887765433 367788888999999999999999742100 000 000
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
.-.....+.+.++++++..+|.+.+..|..
T Consensus 77 ~~r~~~~~~l~~~i~~A~~lGa~~vv~h~g 106 (273)
T smart00518 77 EKVEKSIERLIDEIKRCEELGIKALVFHPG 106 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 001123466888999999999988777764
No 180
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=60.63 E-value=1.5e+02 Score=28.56 Aligned_cols=113 Identities=13% Similarity=0.036 Sum_probs=60.2
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|++++-+.-.......++.++.+++++.+.+. +.++.+++. +..+..+..+.+.+.|.....-..+......+
T Consensus 32 ~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a~~a~~~G~d~v~~~~P~~~~~~~ 111 (284)
T cd00950 32 ENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELTKRAEKAGADAALVVTPYYNKPSQ 111 (284)
T ss_pred HcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHHHHHHHcCCCEEEEcccccCCCCH
Confidence 6788777544332334556777777777655443 467777774 33444555566677776643222111111122
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
.+-+....+++...+.++.+.+..... ..+.+.++.+.
T Consensus 112 ~~l~~~~~~ia~~~~~pi~lYn~P~~~g~~ls~~~~~~L~~~ 153 (284)
T cd00950 112 EGLYAHFKAIAEATDLPVILYNVPGRTGVNIEPETVLRLAEH 153 (284)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEChhHhCCCCCHHHHHHHhcC
Confidence 233344444555567888877764211 13566666543
No 181
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=60.07 E-value=2e+02 Score=29.11 Aligned_cols=141 Identities=18% Similarity=0.128 Sum_probs=83.2
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCC--------CCCHHHHHHHHHHHhccccee----eeee
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMD----YGFH 174 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~ 174 (538)
|-|.|-.+... ....+++...+..+=+.|++++--.++.. +++-|+.++...+..++..+. .-..
T Consensus 13 lRDghQSl~AT---Rmrt~DmlPi~e~lD~~G~~slE~WGGATFDaciRfLnEDPWeRLr~lk~~~~nT~LQMLlRGQNl 89 (472)
T COG5016 13 LRDGHQSLLAT---RMRTEDMLPIAEALDKVGYWSLEVWGGATFDACIRFLNEDPWERLRELKKAVPNTKLQMLLRGQNL 89 (472)
T ss_pred echHHHHHHHH---HHhHHhhHHHHHHHHhcCeeEEEecCCccHHHHHHHhcCCHHHHHHHHHHhCCCcHHHHHHccCcc
Confidence 33455444332 23455555556666778998876443322 124566677766666553222 1112
Q ss_pred eeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc-------CChhhHHHHHHH
Q 009282 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-------ENGDAVFEGQKR 247 (538)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-------~~~~~~~~~~~~ 247 (538)
.+.....++..+.+.+...+.|.+.+.+|-.- -+...++..+++++++|..+.+-. .+-+...+..+.
T Consensus 90 vGYrhyaDDvVe~Fv~ka~~nGidvfRiFDAl-----ND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~ake 164 (472)
T COG5016 90 VGYRHYADDVVEKFVEKAAENGIDVFRIFDAL-----NDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKE 164 (472)
T ss_pred ccccCCchHHHHHHHHHHHhcCCcEEEechhc-----cchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHH
Confidence 23344556666666665558899999987432 267889999999999998555432 223334455566
Q ss_pred HHHcCCCC
Q 009282 248 MIELGITG 255 (538)
Q Consensus 248 ~~~~g~~~ 255 (538)
+.+.|+.+
T Consensus 165 l~~~g~DS 172 (472)
T COG5016 165 LLEMGVDS 172 (472)
T ss_pred HHHcCCCE
Confidence 77777754
No 182
>PRK06801 hypothetical protein; Provisional
Probab=59.61 E-value=1.7e+02 Score=28.27 Aligned_cols=105 Identities=13% Similarity=0.056 Sum_probs=65.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+....+-+.+++.+...+-- ...........+.+..++ ..|++...||.+|....... +.++.+.+.|++....
T Consensus 26 ~n~e~~~avi~AAe~~~~PvIl~-~~~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHlDH~~~~-e~i~~Ai~~GftSVm~ 103 (286)
T PRK06801 26 LDSHFLRALFAAAKQERSPFIIN-IAEVHFKYISLESLVEAVKFEAARHDIPVVLNLDHGLHF-EAVVRALRLGFSSVMF 103 (286)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE-eCcchhhcCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCcEEEE
Confidence 34555566655554555554422 121111223555555554 56788999999999665544 5566777889877654
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
.....|.....+...++.++++..|..+
T Consensus 104 D~S~l~~eeNi~~t~~v~~~a~~~gv~V 131 (286)
T PRK06801 104 DGSTLEYEENVRQTREVVKMCHAVGVSV 131 (286)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 4444566666677788888888888765
No 183
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=59.00 E-value=1.8e+02 Score=28.40 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=63.2
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
..|++++-+.-+......++.++-+++++.+.+ .++++.+|+. +..+..+..+.+.+.|.....-..+.-....+
T Consensus 40 ~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~Gad~vlv~~P~y~~~~~ 119 (309)
T cd00952 40 AAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLGADGTMLGRPMWLPLDV 119 (309)
T ss_pred HcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhCCCEEEECCCcCCCCCH
Confidence 678888765444334456788887777765543 3578888884 34455556666777777654322211111122
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEeccCHH----HHHHHHHHHH
Q 009282 269 GEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 269 ~~~i~~~l~~~~~~-~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
.+-++....++... +.++.+.|..... ..+.+.++.+
T Consensus 120 ~~l~~yf~~va~a~~~lPv~iYn~P~~tg~~l~~~~l~~L~~ 161 (309)
T cd00952 120 DTAVQFYRDVAEAVPEMAIAIYANPEAFKFDFPRAAWAELAQ 161 (309)
T ss_pred HHHHHHHHHHHHhCCCCcEEEEcCchhcCCCCCHHHHHHHhc
Confidence 23333344455556 5788887765321 2366666653
No 184
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=57.26 E-value=1.7e+02 Score=28.24 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=66.8
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHH-HHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
+.+....+-+.+++.+...+--. ..........+.+.. +...|++...||.+|....... +.+..+.+.|.++....
T Consensus 27 n~e~~~avi~AAee~~sPvIlq~-~~~~~~~~g~~~~~~~~~~~A~~~~VPValHLDH~~~~-e~i~~ai~~GftSVM~D 104 (284)
T PRK12857 27 NMEIVQAIVAAAEAEKSPVIIQA-SQGAIKYAGIEYISAMVRTAAEKASVPVALHLDHGTDF-EQVMKCIRNGFTSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-chhHhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCeEEEe
Confidence 34455555555545454444221 211111234455555 4457788999999999666544 34556677898877666
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
....|.....+...+..++++..|..+-
T Consensus 105 gS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12857 105 GSKLPLEENIALTKKVVEIAHAVGVSVE 132 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6667878888888999999998887653
No 185
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=56.58 E-value=1.9e+02 Score=27.90 Aligned_cols=66 Identities=24% Similarity=0.279 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCcEEEEEee-eCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-YKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+... .|| .+.++.+.++++-+ ..++|++.|-...-. .+.++.+...|+.
T Consensus 157 peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ldfd~l~~I~~---~~~vPLVLHGgSG~~-~e~~~kai~~GI~ 227 (286)
T PRK12738 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIRE---VVDVPLVLHGASDVP-DEFVRRTIELGVT 227 (286)
T ss_pred HHHHHHHHHHhCCCEEEeccCcccCCCCCCCcCCHHHHHHHHH---HhCCCEEEeCCCCCC-HHHHHHHHHcCCe
Confidence 456666676789998876554 233 34556666666644 348999999855433 2445555666654
No 186
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=56.31 E-value=2e+02 Score=27.86 Aligned_cols=112 Identities=13% Similarity=0.025 Sum_probs=60.1
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|++++-+.-.......++.++-.++++.+.+. +.++.+|+.. ..+..+..+.+.+.|.....-..+.-....+
T Consensus 33 ~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~G~d~v~~~pP~~~~~~~ 112 (292)
T PRK03170 33 ANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVNGRVPVIAGTGSNSTAEAIELTKFAEKAGADGALVVTPYYNKPTQ 112 (292)
T ss_pred HcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhCCCCcEEeecCCchHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 5788777543333334566777777776655432 4678888743 3444455556667776543221111111122
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
.+-++...+++...+.++.+.+..... ..+.+.++.+
T Consensus 113 ~~i~~~~~~ia~~~~~pv~lYn~P~~~g~~l~~~~~~~L~~ 153 (292)
T PRK03170 113 EGLYQHFKAIAEATDLPIILYNVPGRTGVDILPETVARLAE 153 (292)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHHc
Confidence 233344445566667888887764211 1366666643
No 187
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=55.63 E-value=2e+02 Score=27.78 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHcCCcEEEEEee-----eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 184 VSDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
..++..+..++.|++.+-+... |.+.+.++.+.++++-+ +.+.|++.|-...-.. +.++.+...|+.
T Consensus 157 ~peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~L~~~~L~~I~~---~~~iPLVLHGgSG~~~-e~~~~ai~~Gi~ 228 (285)
T PRK07709 157 DPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRD---FTGVPLVLHGGTGIPT-ADIEKAISLGTS 228 (285)
T ss_pred CHHHHHHHHHHhCCCEEEEeecccccCcCCCCccCHHHHHHHHH---HHCCCEEEeCCCCCCH-HHHHHHHHcCCe
Confidence 3456667776789998876554 23335567777777643 4589999998554322 345555666654
No 188
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=54.83 E-value=2.1e+02 Score=27.68 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHcCCcEEEEEeee-CC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
..++..+..++.|++.+.+.... || .+.++.+.++++-+ ..+.|++.|-...-. ++.++.+...|+.
T Consensus 156 ~peea~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~vPLVLHGgSG~~-~e~~~~ai~~Gi~ 227 (284)
T PRK09195 156 DPAQAREFVEATGIDSLAVAIGTAHGMYKGEPKLDFDRLENIRQ---WVNIPLVLHGASGLP-TKDIQQTIKLGIC 227 (284)
T ss_pred CHHHHHHHHHHHCcCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCeEEecCCCCC-HHHHHHHHHcCCe
Confidence 34566677767899988765542 33 35667787777754 348999999855433 2445555666654
No 189
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=54.55 E-value=2.6e+02 Score=28.68 Aligned_cols=121 Identities=17% Similarity=0.172 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCc---cCCHHHHHHHHHHHHhcCC
Q 009282 153 LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGA 229 (538)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~A~~~g~ 229 (538)
.+..+...........+.+|.|..+.. .....+.+.. +.|+..+.+|...+..+ .++.+...++.+.++++|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~iGaHvSiaG---G~~~a~~~a~-~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~~gi 190 (413)
T PTZ00372 115 VDNAFNKIAELAEKSNVYIGAHVSASG---GVDNSPINAY-NIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKKYNY 190 (413)
T ss_pred hHHHHHHHHHHhhccCceEEEEEeccc---cHHHHHHHHH-HcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHHcCC
Confidence 344444444445555667777765542 2233444444 78999999998876443 4568888889899999976
Q ss_pred ---eEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 230 ---LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 230 ---~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
++..|+...-... .+ ...-.....+.+.+.++.+..+|.+.+..|...
T Consensus 191 ~~~~i~~HapYlINLA------------Sp----d~e~rekSv~~~~~eL~rA~~LGa~~VV~HPGs 241 (413)
T PTZ00372 191 DPKFILPHGSYLINLA------------NP----DKEKREKSYDAFLDDLQRCEQLGIKLYNFHPGS 241 (413)
T ss_pred CcceEEeecCceecCC------------CC----CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 3788985421000 00 000011234667788899999999998888765
No 190
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=53.27 E-value=2.1e+02 Score=27.35 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=62.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|++++-+.-.......++.++-+++++.+.+. ..++.+++.. ..+..+..+.+.+.|.....-..+.-....+
T Consensus 29 ~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 108 (281)
T cd00408 29 EAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTREAIELARHAEEAGADGVLVVPPYYNKPSQ 108 (281)
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEEecCCccHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 6688887554333334566777777777665433 5788888843 3334455556677777654322211111222
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
.+-++....++...+.++.+.+..... ..+.+.++.+
T Consensus 109 ~~~~~~~~~ia~~~~~pi~iYn~P~~tg~~l~~~~~~~L~~ 149 (281)
T cd00408 109 EGIVAHFKAVADASDLPVILYNIPGRTGVDLSPETIARLAE 149 (281)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHhc
Confidence 333444445555567888887765321 2366666664
No 191
>PRK08185 hypothetical protein; Provisional
Probab=53.13 E-value=2.2e+02 Score=27.49 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=64.3
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
.+.+....+-+.+++.+...+--. ..........+...-+...|++...|+.+|....... +.+..+.+.|..+....
T Consensus 21 ~n~e~~~avi~AAee~~sPvIl~~-~~~~~~~~~~~~~~~~~~~a~~~~vPV~lHLDHg~~~-e~i~~ai~~Gf~SVM~D 98 (283)
T PRK08185 21 ADSCFLRAVVEEAEANNAPAIIAI-HPNELDFLGDNFFAYVRERAKRSPVPFVIHLDHGATI-EDVMRAIRCGFTSVMID 98 (283)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEe-CcchhhhccHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEEe
Confidence 445556666666655566554322 1111111234433444567889999999999665543 44556667787765544
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
....|.....+...+..++++..|..+
T Consensus 99 ~S~l~~eeNi~~t~~vv~~a~~~gv~v 125 (283)
T PRK08185 99 GSLLPYEENVALTKEVVELAHKVGVSV 125 (283)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 444566666677788888888887765
No 192
>PRK08227 autoinducer 2 aldolase; Validated
Probab=52.17 E-value=2.2e+02 Score=27.18 Aligned_cols=82 Identities=12% Similarity=0.061 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (538)
..+++.. +.|++.+.+.+...+.. .-..+.+.++.++|+++|+++.+-......+
T Consensus 98 ~sVeeAv-rlGAdAV~~~v~~Gs~~E~~~l~~l~~v~~ea~~~G~Plla~~prG~~~----------------------- 153 (264)
T PRK08227 98 VDMEDAV-RLNACAVAAQVFIGSEYEHQSIKNIIQLVDAGLRYGMPVMAVTAVGKDM----------------------- 153 (264)
T ss_pred ecHHHHH-HCCCCEEEEEEecCCHHHHHHHHHHHHHHHHHHHhCCcEEEEecCCCCc-----------------------
Confidence 3455666 78999988765442211 1124566778899999999998833221110
Q ss_pred chHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 265 PLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 265 ~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
..+.+-+..+.+++.++|.+++=+-.+
T Consensus 154 -~~~~~~ia~aaRiaaELGADiVK~~y~ 180 (264)
T PRK08227 154 -VRDARYFSLATRIAAEMGAQIIKTYYV 180 (264)
T ss_pred -CchHHHHHHHHHHHHHHcCCEEecCCC
Confidence 012346888999999999888765554
No 193
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=52.07 E-value=2.2e+02 Score=27.44 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=65.2
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHH-HHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
+-+....+-+.+++.+...+-- ...........+.+..+ ...|++.+.||.+|....... +.+..+.+.|.++....
T Consensus 27 n~e~~~avi~AAe~~~sPvIl~-~~~~~~~~~g~~~~~~~~~~~A~~~~vPV~lHLDH~~~~-e~i~~Ai~~GftSVM~D 104 (283)
T PRK07998 27 NLETTISILNAIERSGLPNFIQ-IAPTNAQLSGYDYIYEIVKRHADKMDVPVSLHLDHGKTF-EDVKQAVRAGFTSVMID 104 (283)
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-CcHhHHhhCCHHHHHHHHHHHHHHCCCCEEEECcCCCCH-HHHHHHHHcCCCEEEEe
Confidence 3444555555454445444321 11111122345555544 456789999999999665544 44555678898876655
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
....|.....+...+..++++..|..+
T Consensus 105 gS~l~~eeNi~~T~~vve~Ah~~gv~V 131 (283)
T PRK07998 105 GAALPFEENIAFTKEAVDFAKSYGVPV 131 (283)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 555677777788899999999999876
No 194
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=51.86 E-value=1.5e+02 Score=29.14 Aligned_cols=55 Identities=18% Similarity=0.355 Sum_probs=30.1
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHc
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 427 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~l 427 (538)
|+ .++||||..... ..+.|+.. ...++.+...+.+.| +|.+++=+.+-.|.-+.+
T Consensus 263 G~dhVgiGsDfdg~~------------~~~~gl~~-~~~~~~l~~~L~~rG-~s~~~i~kI~g~N~lRv~ 318 (320)
T PF01244_consen 263 GIDHVGIGSDFDGID------------GPPEGLED-PSDLPNLTEELLKRG-YSEEDIEKILGGNFLRVL 318 (320)
T ss_dssp -GGGEEEE--BTTTS------------SHBBTBSS-GGGHHHHHHHHHHTT-S-HHHHHHHHTHHHHHHH
T ss_pred CCCeEEECcccCCCC------------CCCCccCC-HHHHHHHHHHHHHCC-CCHHHHHHHHhHhHHHHh
Confidence 44 689999963221 11233333 234566665555655 999998887777766654
No 195
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=51.76 E-value=2e+02 Score=26.70 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=60.2
Q ss_pred hHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec---CChhh-----HHHHHHHHHHcCC
Q 009282 126 DFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK---WDEVV-----SDEMEVMVKEKGI 197 (538)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~g~ 197 (538)
++....+.++..|+.+++-... .... ............+.-..++. ..+.. ..++++.. +.|+
T Consensus 20 ~~~~~~~~a~~~~~~av~v~p~-----~~~~---~~~~~~~~~~~~~~vi~fp~g~~~~~~k~~~~~~~~ve~A~-~~GA 90 (236)
T PF01791_consen 20 DIKKLCREAIEYGFDAVCVTPG-----YVKP---AAELLAGSGVKVGLVIGFPFGTSTTEPKGYDQIVAEVEEAI-RLGA 90 (236)
T ss_dssp HHHHHHHHHHHHTSSEEEEEGG-----GHHH---HHHHSTTSTSEEEEEESTTTSSSTHHHHTCEEEHHHHHHHH-HTT-
T ss_pred hHHHHHHHHHHhCCCEEEECHH-----HHHH---HHHHhhccccccceEEEeCCCCCccccccccchHHHHHHHH-HcCC
Confidence 6677788888889998884321 1111 11111111112222222221 11223 56666666 8899
Q ss_pred cEEEEEeee----CCCccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 198 NSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 198 ~~ik~~~~~----~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
+.+++.+.+ .+......+++.++.++|+++++++.+..
T Consensus 91 d~vd~vi~~~~~~~~~~~~~~~~i~~v~~~~~~~gl~vIlE~ 132 (236)
T PF01791_consen 91 DEVDVVINYGALGSGNEDEVIEEIAAVVEECHKYGLKVILEP 132 (236)
T ss_dssp SEEEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTSEEEEEEEE
T ss_pred ceeeeeccccccccccHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 999988776 12233346888899999999999999996
No 196
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=51.32 E-value=2.3e+02 Score=27.22 Aligned_cols=66 Identities=23% Similarity=0.354 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCcEEEEEeee-CC-----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAY-KG-----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~-----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+.... || .+.++.+.++++-+.. +.|++.|-...-.. +.++.+...|+.
T Consensus 150 pe~a~~Fv~~TgvD~LAvsiGt~HG~Y~~~~p~L~~~~L~~i~~~~---~vPLVlHGgSG~~~-e~~~~ai~~Gi~ 221 (276)
T cd00947 150 PEEAEEFVEETGVDALAVAIGTSHGAYKGGEPKLDFDRLKEIAERV---NVPLVLHGGSGIPD-EQIRKAIKLGVC 221 (276)
T ss_pred HHHHHHHHHHHCCCEEEeccCccccccCCCCCccCHHHHHHHHHHh---CCCEEEeCCCCCCH-HHHHHHHHcCCe
Confidence 5566677767799988765542 23 4456677777666554 89999998554322 334455566654
No 197
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=50.21 E-value=2.4e+02 Score=27.11 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=66.6
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCC-HHHHHHH-HHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN-DELLIEG-FKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~-~~~l~~~-~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
+-+....+-+.+++.++..+--+ +..+..... .+.+..+ ...|+++++||..|....... +......+.|.++...
T Consensus 27 nlE~~~AileaA~e~~sPvIiq~-S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~lHlDHg~~~-~~~~~ai~~GFsSvMi 104 (286)
T COG0191 27 NLETLQAILEAAEEEKSPVIIQF-SEGAAKYAGGADSLAHMVKALAEKYGVPVALHLDHGASF-EDCKQAIRAGFSSVMI 104 (286)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe-cccHHHHhchHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHhcCCceEEe
Confidence 44555555555545555554322 211111223 3445544 467889999999999665433 4445566778877665
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
.....|.+.......+.+++++..|..+-.
T Consensus 105 DgS~~~~eENi~~tkevv~~ah~~gvsVEa 134 (286)
T COG0191 105 DGSHLPFEENIAITKEVVEFAHAYGVSVEA 134 (286)
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 556677777777788888988888877654
No 198
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=49.01 E-value=75 Score=32.24 Aligned_cols=43 Identities=12% Similarity=0.000 Sum_probs=33.3
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcc
Q 009282 211 MINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.++.+.++++++.|+++|+++.+|+ +... .++.+.+.|+...+
T Consensus 210 ~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~----~i~~a~~~Gv~~~e 253 (383)
T PRK15446 210 RYAPPNRRAIAALARARGIPLASHDDDTPE----HVAEAHALGVAIAE 253 (383)
T ss_pred hcCHHHHHHHHHHHHHCCCceeecCCCCHH----HHHHHHHcCCceee
Confidence 3578999999999999999999999 4543 34555666876653
No 199
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=48.71 E-value=2.5e+02 Score=26.94 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=67.4
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
+.+....+-+.+++.+...+-- ...........+.+..++ ..|++...|+.+|....... +.+..+++.|.++....
T Consensus 22 n~e~~~avi~AAe~~~sPvIi~-~~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHLDH~~~~-~~i~~ai~~GftSVMiD 99 (276)
T cd00947 22 NLETLKAILEAAEETRSPVILQ-ISEGAIKYAGLELLVAMVKAAAERASVPVALHLDHGSSF-ELIKRAIRAGFSSVMID 99 (276)
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-cCcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCCEEEeC
Confidence 3445555555554555544422 121111223455555554 56778899999999665544 44456678898877666
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
....|.....+...+..++++..|..+-
T Consensus 100 ~S~l~~eeNi~~t~~vv~~ah~~gv~VE 127 (276)
T cd00947 100 GSHLPFEENVAKTKEVVELAHAYGVSVE 127 (276)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 6667888888888999999999887663
No 200
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=48.62 E-value=3.9e+02 Score=28.99 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=88.7
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCC--------CCCHHHHHHHHHHHhcccceeeee----e
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMDYGF----H 174 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~----~ 174 (538)
|=|.|--+... ..+.+++...+..+-+.|+.++--.++.. .++-++.++...+..++..+..-+ .
T Consensus 11 lRDg~QSl~at---r~~t~d~~~ia~~~d~~g~~siE~~gGatfd~~~rfl~edpwerl~~~r~~~pnt~lqmL~Rg~N~ 87 (596)
T PRK14042 11 LRDAHQCLIAT---RMRTEDMLPICNKMDDVGFWAMEVWGGATFDACLRFLKEDPWSRLRQLRQALPNTQLSMLLRGQNL 87 (596)
T ss_pred cchhhhhhhhc---CCCHHHHHHHHHHHHhcCCCEEEeeCCcccceeecccCCCHHHHHHHHHHhCCCCceEEEeccccc
Confidence 44555434332 45667776667777777877664332221 225678888888887775555433 2
Q ss_pred eeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEE-------cCChhhHHHHHHH
Q 009282 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-------AENGDAVFEGQKR 247 (538)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H-------~~~~~~~~~~~~~ 247 (538)
.+.....++..+..-+...+.|.+.+.+|-. .-+.+.++..++.+++.|..+..- ..+.+...+..+.
T Consensus 88 vGy~~~~d~vv~~~v~~a~~~Gidv~Rifd~-----lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp~~t~e~~~~~ak~ 162 (596)
T PRK14042 88 LGYRNYADDVVRAFVKLAVNNGVDVFRVFDA-----LNDARNLKVAIDAIKSHKKHAQGAICYTTSPVHTLDNFLELGKK 162 (596)
T ss_pred cccccCChHHHHHHHHHHHHcCCCEEEEccc-----CcchHHHHHHHHHHHHcCCEEEEEEEecCCCCCCHHHHHHHHHH
Confidence 3344455666666666555889999988743 225788888999999999866553 2445555566667
Q ss_pred HHHcCCC
Q 009282 248 MIELGIT 254 (538)
Q Consensus 248 ~~~~g~~ 254 (538)
+.+.|..
T Consensus 163 l~~~Gad 169 (596)
T PRK14042 163 LAEMGCD 169 (596)
T ss_pred HHHcCCC
Confidence 7777764
No 201
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=46.79 E-value=3.9e+02 Score=29.00 Aligned_cols=155 Identities=10% Similarity=-0.057 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+..-.+.+..+|+..++-....++. +....++...+.+........+........+...+..+++. +.|++.+-+-
T Consensus 98 v~~~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~t~~~~~~~a~~l~-~~Gad~I~i~-- 174 (592)
T PRK09282 98 VEKFVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTISYTTSPVHTIEKYVELAKELE-EMGCDSICIK-- 174 (592)
T ss_pred hHHHHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHH-HcCCCEEEEC--
Q ss_pred eCCCccCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC
Q 009282 206 YKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 283 (538)
.-.-...++.+.+++...++. ++++.+|+ .+....-...-.+.+.|.....+-....-.....-.++.++......+
T Consensus 175 -Dt~G~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv~aGad~vD~ai~g~g~~agn~~~e~vv~~L~~~g 253 (592)
T PRK09282 175 -DMAGLLTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAVEAGVDIIDTAISPLAFGTSQPPTESMVAALKGTP 253 (592)
T ss_pred -CcCCCcCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHHHhCCCEEEeeccccCCCcCCHhHHHHHHHHHhCC
Q ss_pred CC
Q 009282 284 TP 285 (538)
Q Consensus 284 ~~ 285 (538)
..
T Consensus 254 ~~ 255 (592)
T PRK09282 254 YD 255 (592)
T ss_pred CC
No 202
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=46.71 E-value=2.8e+02 Score=26.79 Aligned_cols=66 Identities=23% Similarity=0.311 Sum_probs=42.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeee-CC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+.... || .+.++.+.++++-+ ..++|++.|-...-. .+.++.+...|+.
T Consensus 155 peea~~Fv~~TgvD~LAvaiGt~HG~yk~~p~Ldf~~L~~I~~---~~~iPLVlHGgSG~~-~e~~~~ai~~Gi~ 225 (282)
T TIGR01858 155 PQEAKEFVEATGVDSLAVAIGTAHGLYKKTPKLDFDRLAEIRE---VVDVPLVLHGASDVP-DEDVRRTIELGIC 225 (282)
T ss_pred HHHHHHHHHHHCcCEEecccCccccCcCCCCccCHHHHHHHHH---HhCCCeEEecCCCCC-HHHHHHHHHcCCe
Confidence 3566666767899988765542 33 34667777777754 448999999855433 2445555666654
No 203
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=46.23 E-value=2.8e+02 Score=26.74 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHcCCcEEEEEee-eCCC---ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 184 VSDEMEVMVKEKGINSFKFFMA-YKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~-~~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
..++..+..++.|++.+.+... .||. +.++.+.++++-+ ..+.|++.|-...-.. +.++.+...|+.
T Consensus 154 ~pe~a~~Fv~~TgvD~LAvaiGt~HG~Y~~p~l~~~~l~~I~~---~~~vPLVlHGgSG~~~-e~~~~ai~~Gi~ 224 (283)
T PRK07998 154 EPEKVKDFVERTGCDMLAVSIGNVHGLEDIPRIDIPLLKRIAE---VSPVPLVIHGGSGIPP-EILRSFVNYKVA 224 (283)
T ss_pred CHHHHHHHHHHhCcCeeehhccccccCCCCCCcCHHHHHHHHh---hCCCCEEEeCCCCCCH-HHHHHHHHcCCc
Confidence 3456677776789998887553 2343 3445666666644 4589999998554322 334555666664
No 204
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=46.17 E-value=2.8e+02 Score=26.75 Aligned_cols=66 Identities=26% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeee-CC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+.... || .+.++.+.++++-+ ..+.|++.|-...-. ++.++.+...|+.
T Consensus 157 peeA~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~iPLVlHGgSG~~-~e~~~kai~~Gi~ 227 (284)
T PRK12737 157 PDAAAEFVERTGIDSLAVAIGTAHGLYKGEPKLDFERLAEIRE---KVSIPLVLHGASGVP-DEDVKKAISLGIC 227 (284)
T ss_pred HHHHHHHHHHhCCCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCEEEeCCCCCC-HHHHHHHHHCCCe
Confidence 4566667767899988765542 33 34567777777744 347999999855432 2345555566654
No 205
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=46.06 E-value=3e+02 Score=26.98 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=30.1
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhH
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEC 423 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~ 423 (538)
|+ .+++|||.... ...+.|+.. ...++.+...+.+.| +|.+++=+.+--|.
T Consensus 255 G~dhVgiGsDfdg~------------~~~~~gl~~-~~~~~~l~~~L~~rG-~s~~~i~~i~g~N~ 306 (309)
T cd01301 255 GIDHVGLGSDFDGI------------GGTPGGLED-VSDLPNLTAELLERG-YSEEEIEKIAGGNF 306 (309)
T ss_pred CCCeEEECcccCCC------------CCCccccCC-HHHHHHHHHHHHHcC-CCHHHHHHHHhhch
Confidence 55 48999995422 122333333 235566665565655 99998877765554
No 206
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=46.02 E-value=2.9e+02 Score=26.75 Aligned_cols=106 Identities=14% Similarity=0.076 Sum_probs=67.0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc-CCHHHHHHHHH-HHHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM-INDELLIEGFK-RCKSLG--ALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~~-~A~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
.+-+....+-+.+++.+...+--. ....... ...+.+..++. .|++.. .|+..|....... +.+..+++.|.++
T Consensus 26 ~n~e~~~avi~AAe~~~sPvIiq~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~VPV~lHLDHg~~~-e~i~~ai~~GftS 103 (285)
T PRK07709 26 NNLEWTQAILAAAEEEKSPVILGV-SEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSF-EKCKEAIDAGFTS 103 (285)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEc-CcchhhhcCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCH-HHHHHHHHcCCCE
Confidence 344555555555545555544221 2111112 34556666654 455555 7999999666544 4445667889887
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
........|.....+...++.++++..|..+-
T Consensus 104 VM~DgS~lp~eeNi~~Trevv~~Ah~~gv~VE 135 (285)
T PRK07709 104 VMIDASHHPFEENVETTKKVVEYAHARNVSVE 135 (285)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 76666667778888889999999999887663
No 207
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=45.93 E-value=3.4e+02 Score=27.60 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCcEEEecccCCCC
Q 009282 128 FSGQAAALAGGTTMHIDFVIPIN 150 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~ 150 (538)
..-++.++.+|--|++|.....+
T Consensus 80 ~~K~~~A~~~GADtiMDLStggd 102 (431)
T PRK13352 80 LEKAKVAVKYGADTIMDLSTGGD 102 (431)
T ss_pred HHHHHHHHHcCCCeEeeccCCCC
Confidence 34467789999999999965543
No 208
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=45.72 E-value=2.9e+02 Score=26.72 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=66.2
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcC--CeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG--ALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g--~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
.+.+....+-+.+++.+...+--.......+....+.+..++. .|++.. .|+.+|....... +.+..+++.|.++.
T Consensus 26 ~n~e~~~avi~AAee~~sPvIl~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~vPV~lHLDHg~~~-e~i~~ai~~GftSV 104 (286)
T PRK08610 26 NNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSF-EKCKEAIDAGFTSV 104 (286)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEcCccHHhhcCcHHHHHHHHHHHHHHcCCCCCEEEECCCCCCH-HHHHHHHHcCCCEE
Confidence 3455555555555455555542211111011112455555554 456666 7999999665544 44456778898877
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.......|.....+...+..++++..|..+-
T Consensus 105 M~DgS~l~~eeNi~~T~~vve~Ah~~gv~VE 135 (286)
T PRK08610 105 MIDASHSPFEENVATTKKVVEYAHEKGVSVE 135 (286)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6555567777778888999999998887663
No 209
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=44.76 E-value=3.1e+02 Score=26.81 Aligned_cols=106 Identities=12% Similarity=0.092 Sum_probs=66.0
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG-ALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.+-+....+-+.+++.+...+-- .+.........+.+..++. .|++.. .++..|....... +.+..+++.|.++..
T Consensus 25 ~n~e~~~avi~AAe~~~sPvIlq-~s~~~~~~~g~~~~~~~~~~~a~~~~~VPValHLDHg~~~-e~i~~ai~~GftSVM 102 (307)
T PRK05835 25 VNFEMLNAIFEAGNEENSPLFIQ-ASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTF-ESCEKAVKAGFTSVM 102 (307)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE-cCccHHhhCChHHHHHHHHHHHHhcCCCeEEEECCCCCCH-HHHHHHHHcCCCEEE
Confidence 34455555555554555544422 1111111234555555554 456775 8999999666544 455567788988766
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
......|.....+...++.++++..|..+-
T Consensus 103 ~DgS~l~~eeNi~~T~~vve~Ah~~gv~VE 132 (307)
T PRK05835 103 IDASHHAFEENLELTSKVVKMAHNAGVSVE 132 (307)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 555556777777888999999998887653
No 210
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=44.46 E-value=2.9e+02 Score=27.14 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=51.1
Q ss_pred HHHHHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 219 EGFKRCKSL--GALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 219 ~~~~~A~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.+...|++. ..|+.+|....... +.+..+++.|.++........|.....+...++.++++..|..+-
T Consensus 74 ~~~~~a~~a~~~VPV~lHLDHg~~~-e~i~~ai~~GftSVMiD~S~lp~eeNI~~T~evv~~Ah~~GvsVE 143 (321)
T PRK07084 74 GAVEYAKELGCPIPIVLHLDHGDSF-ELCKDCIDSGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVE 143 (321)
T ss_pred HHHHHHHHcCCCCcEEEECCCCCCH-HHHHHHHHcCCCEEEeeCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 345567777 68999999665544 455677788998776666667888888889999999998887653
No 211
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=44.37 E-value=3.1e+02 Score=26.60 Aligned_cols=106 Identities=9% Similarity=0.021 Sum_probs=67.5
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc-CCHHHHHHHH-HHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM-INDELLIEGF-KRCKSL--GALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~A~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
.+.+....+-+.+++.+...+-- ........ ...+.+..++ ..|++. ..||..|....... +.+..+.+.|.++
T Consensus 26 ~n~e~~~avi~AAee~~sPvIlq-~~~~~~~~~~g~~~~~~~~~~~a~~~~~~VPV~lHLDHg~~~-e~i~~ai~~GftS 103 (288)
T TIGR00167 26 NNLETINAVLEAAAEEKSPVIIQ-FSNGAAKYIAGLGAISAMVKAMSEAYPYGVPVALHLDHGASE-EDCAQAVKAGFSS 103 (288)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE-CCcchhhccCCHHHHHHHHHHHHHhccCCCcEEEECCCCCCH-HHHHHHHHcCCCE
Confidence 34455555555554555554422 12111111 2455565554 456777 88999999665544 4555667789887
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
........|.....+...+..++++..|..+-
T Consensus 104 VMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 135 (288)
T TIGR00167 104 VMIDGSHEPFEENIELTKKVVERAHKMGVSVE 135 (288)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 76666667777788888999999998887664
No 212
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=44.15 E-value=3e+02 Score=26.51 Aligned_cols=111 Identities=15% Similarity=-0.006 Sum_probs=66.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHH-HHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+.+....+-+.+++.+...+-- ...........+.+.. +...|++...||.+|....... +.++.+.+.|.+....
T Consensus 26 ~n~e~~~avi~aAe~~~~Pvii~-~~~~~~~~~~~~~~~~~~~~~a~~~~vpv~lHlDH~~~~-e~i~~Al~~G~tsVm~ 103 (281)
T PRK06806 26 ANMEMVMGAIKAAEELNSPIILQ-IAEVRLNHSPLHLIGPLMVAAAKQAKVPVAVHFDHGMTF-EKIKEALEIGFTSVMF 103 (281)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-cCcchhccCChHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHcCCCEEEE
Confidence 34555555555554555544422 1211111124444443 3457888999999999665443 4566677788876654
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEE--EEecc
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY--VVHVM 292 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~--~~h~~ 292 (538)
.....+.....+...++.++++..|..+- +.|+.
T Consensus 104 d~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghlG 139 (281)
T PRK06806 104 DGSHLPLEENIQKTKEIVELAKQYGATVEAEIGRVG 139 (281)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeEC
Confidence 44445556666777888888988887653 35664
No 213
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=43.86 E-value=5e+02 Score=30.75 Aligned_cols=107 Identities=14% Similarity=0.097 Sum_probs=61.3
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeee-----ecCChhhHHHHHHHHHHcCCcEEEE
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAI-----TKWDEVVSDEMEVMVKEKGINSFKF 202 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (538)
.-.+.+.++||..++-+-.-++. ++...++...+.+...-..+.+.... +..+.+...++.+.+.+.|++.+.+
T Consensus 629 ~f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~Gad~I~i 708 (1143)
T TIGR01235 629 YFVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAGAHILGI 708 (1143)
T ss_pred HHHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34566789999998855333332 55666666665554322233333211 1223343444443334789987754
Q ss_pred EeeeCCCccCCHHHHHHHHHHHH-hcCCeEEEEcCCh
Q 009282 203 FMAYKGSFMINDELLIEGFKRCK-SLGALAMVHAENG 238 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~-~~g~~v~~H~~~~ 238 (538)
- +..| ..++.....++...+ +.++++..|+++.
T Consensus 709 k-Dt~G--ll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt 742 (1143)
T TIGR01235 709 K-DMAG--LLKPAAAKLLIKALREKTDLPIHFHTHDT 742 (1143)
T ss_pred C-CCcC--CcCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 2 2222 356778888877765 3589999999654
No 214
>TIGR00126 deoC deoxyribose-phosphate aldolase. Deoxyribose-phosphate aldolase is involved in the catabolism of nucleotides and deoxyriibonucleotides. The catalytic process is as follows: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. It is found in both gram-postive and gram-negative bacteria.
Probab=43.34 E-value=2.6e+02 Score=25.59 Aligned_cols=132 Identities=15% Similarity=0.116 Sum_probs=76.5
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhccccee----eeeeeeeecCChhhHHHHHHHHHHc
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD----YGFHMAITKWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (538)
...+.+++......+..+|+-+++-. | .++....+.-....+. .+|..+ ....+....+.++.. +.
T Consensus 13 p~~t~~~i~~lc~~A~~~~~~avcv~--p------~~v~~a~~~l~~~~v~v~tVigFP~G-~~~~~~K~~E~~~Av-~~ 82 (211)
T TIGR00126 13 ADTTEEDIITLCAQAKTYKFAAVCVN--P------SYVPLAKELLKGTEVRICTVVGFPLG-ASTTDVKLYETKEAI-KY 82 (211)
T ss_pred CCCCHHHHHHHHHHHHhhCCcEEEeC--H------HHHHHHHHHcCCCCCeEEEEeCCCCC-CCcHHHHHHHHHHHH-Hc
Confidence 45688889999999999999998843 1 1222222221111122 233222 122344566666666 78
Q ss_pred CCcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 196 GINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 196 g~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
|++.+.+.++.. +.+..-.+++.++.++++ |+++.+=.+.... ..+.
T Consensus 83 GAdEiDvv~n~g~l~~g~~~~v~~ei~~i~~~~~--g~~lKvIlE~~~L---------------------------~~~e 133 (211)
T TIGR00126 83 GADEVDMVINIGALKDGNEEVVYDDIRAVVEACA--GVLLKVIIETGLL---------------------------TDEE 133 (211)
T ss_pred CCCEEEeecchHhhhCCcHHHHHHHHHHHHHHcC--CCeEEEEEecCCC---------------------------CHHH
Confidence 999998877753 333334566677777665 6665553343211 0144
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 009282 272 TTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h 290 (538)
+.++.+++.+.|..++=+-
T Consensus 134 i~~a~~ia~eaGADfvKTs 152 (211)
T TIGR00126 134 IRKACEICIDAGADFVKTS 152 (211)
T ss_pred HHHHHHHHHHhCCCEEEeC
Confidence 6677777888887775443
No 215
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=41.81 E-value=3.2e+02 Score=26.18 Aligned_cols=107 Identities=16% Similarity=0.082 Sum_probs=60.6
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (538)
|..+.+.+.......+..||..++-.+..+.. .. .+.++...+...+ + ..+... ...+..+..+. +
T Consensus 15 g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~--v----i~gvg~~~~~~ai~~a~~-a 87 (279)
T cd00953 15 NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDK--V----IFQVGSLNLEESIELARA-A 87 (279)
T ss_pred CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCC--E----EEEeCcCCHHHHHHHHHH-H
Confidence 56677778788888899999999876544332 12 2222333332221 1 112222 22334444333 3
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
++.|++.+-+..-+... ..+.+.+.+.+....+ ++++.++-
T Consensus 88 ~~~Gad~v~v~~P~y~~-~~~~~~i~~yf~~v~~-~lpv~iYn 128 (279)
T cd00953 88 KSFGIYAIASLPPYYFP-GIPEEWLIKYFTDISS-PYPTFIYN 128 (279)
T ss_pred HHcCCCEEEEeCCcCCC-CCCHHHHHHHHHHHHh-cCCEEEEe
Confidence 47899988765432111 1357788777766555 88888874
No 216
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=41.67 E-value=3e+02 Score=27.72 Aligned_cols=86 Identities=10% Similarity=0.102 Sum_probs=51.0
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCC--EEEEecc-CHHHHHHH-HHHHHcCCcEEEeccccccccCcccccCCCcc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTP--LYVVHVM-SMDAMEEI-AKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~--~~~~h~~-~~~~~~~i-~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (538)
..|...++...+...+.++.+.+...+.+ .+..|++ .....+.+ +.+++.|+.+.. .+++|+.+..+..
T Consensus 161 ~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~~------ 233 (388)
T PRK10657 161 SDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPLF------ 233 (388)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHHH------
Confidence 34444556666666666666665554432 6788987 35555666 444688887664 6665554322211
Q ss_pred cccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
+...++++.|..+.+..
T Consensus 234 -----------------~~~~~~~~~G~~~~v~~ 250 (388)
T PRK10657 234 -----------------EQALEFAKKGGVIDLTT 250 (388)
T ss_pred -----------------HHHHHHHHcCCeEEEec
Confidence 22566777888876664
No 217
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=41.32 E-value=3.2e+02 Score=26.04 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCcc---CCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFM---INDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~---~~~~~l~~~~~~A~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
...++++. +.|.+.+.+|...+..+. .+.+..+.+.+...++++. +.+|+.-.-. +.+
T Consensus 14 ~~a~~~~~-~~G~~~~qif~~~P~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~iN------------las--- 77 (274)
T TIGR00587 14 QAAYNRAA-EIGATAFMFFLKSPRWWRRPMLEEEVIDWFKAALETNKNLSQIVLVHAPYLIN------------LAS--- 77 (274)
T ss_pred HHHHHHHH-HhCCCEEEEEecCccccCCCCCCHHHHHHHHHHHHHcCCCCcceeccCCeeee------------cCC---
Confidence 34455555 889999999988765433 3456666666667777665 7888753200 000
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
....-.....+.+.+.++.+..+|.+....|...
T Consensus 78 -~~~~~r~~sv~~~~~~i~~A~~lga~~vv~H~G~ 111 (274)
T TIGR00587 78 -PDEEKEEKSLDVLDEELKRCELLGIMLYNFHPGS 111 (274)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 0000011234667888999999999988888754
No 218
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=41.30 E-value=3.4e+02 Score=26.28 Aligned_cols=111 Identities=7% Similarity=-0.078 Sum_probs=59.1
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
+.|++++-+.-.......++.++-+++++.+.+ ...++.+|+.. ..+.-+..+.+.+.|.....-..+.-....+.
T Consensus 37 ~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~~~Gadav~~~pP~y~~~s~~ 116 (296)
T TIGR03249 37 GYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAEKAGADGYLLLPPYLINGEQE 116 (296)
T ss_pred hcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 678888755433333456788888777776543 34678888743 22233344455666765432221111111222
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccC--HHHHHHHHHHHH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHVMS--MDAMEEIAKARK 305 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~~~--~~~~~~i~~~~~ 305 (538)
.-++....++...+.++++.+... .+ .+.+.++.+
T Consensus 117 ~i~~~f~~v~~a~~~pvilYn~~g~~l~-~~~~~~La~ 153 (296)
T TIGR03249 117 GLYAHVEAVCESTDLGVIVYQRDNAVLN-ADTLERLAD 153 (296)
T ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCC-HHHHHHHHh
Confidence 223334445555677888776321 23 367777764
No 219
>PRK12999 pyruvate carboxylase; Reviewed
Probab=41.28 E-value=6.2e+02 Score=30.04 Aligned_cols=181 Identities=11% Similarity=-0.021 Sum_probs=0.0
Q ss_pred ChhhHHHH-HHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeee-----eeecCChhhHHHHHHHHHHc
Q 009282 123 TIDDFFSG-QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM-----AITKWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 123 ~~~~~~~~-~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 195 (538)
.++++... .+.+..+|+..++-....++. .....++...+.+......+++.+ ..+..+.+...++.+.+.+.
T Consensus 624 yp~~v~~~~i~~a~~~Gid~~rifd~lnd~~~~~~~i~~vk~~g~~~~~~i~ytg~~~d~~~~~~~~~~~~~~a~~l~~~ 703 (1146)
T PRK12999 624 YPDNVVRAFVREAAAAGIDVFRIFDSLNWVENMRVAIDAVRETGKIAEAAICYTGDILDPARAKYDLDYYVDLAKELEKA 703 (1146)
T ss_pred CCchHHHHHHHHHHHcCCCEEEEeccCChHHHHHHHHHHHHHcCCeEEEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHc
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
|++.+.+- .-.-.+++....+++...++. ++++..|+ .+....-...-.+.+.|......-....-.....-.++
T Consensus 704 Ga~~i~ik---Dt~G~l~P~~~~~lv~~lk~~~~ipi~~H~Hnt~Gla~an~laA~~aGad~vD~av~glg~~tgn~~le 780 (1146)
T PRK12999 704 GAHILAIK---DMAGLLKPAAAYELVSALKEEVDLPIHLHTHDTSGNGLATYLAAAEAGVDIVDVAVASMSGLTSQPSLN 780 (1146)
T ss_pred CCCEEEEC---CccCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCchHHHHHHHHHHhCCCEEEecchhhcCCcCCHHHH
Q ss_pred HHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHc
Q 009282 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~ 306 (538)
.++......+...-+..-......+.+..+++.
T Consensus 781 ~vv~~L~~~~~~t~idl~~l~~~s~~~~~~r~~ 813 (1146)
T PRK12999 781 SIVAALEGTERDTGLDLDAIRKLSPYWEAVRPY 813 (1146)
T ss_pred HHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHhH
No 220
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=41.27 E-value=3.4e+02 Score=26.25 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHcCCcEEEEEee-eCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 184 VSDEMEVMVKEKGINSFKFFMA-YKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~-~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
..++..+..++.|++.+-+... -|| .+.++.+.++++-+ ..++|++.|-...-.. +.++.+...|+.
T Consensus 157 ~peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~---~~~vPLVLHGgSG~~~-e~~~~ai~~GI~ 228 (286)
T PRK08610 157 DPKECQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGL---STGLPLVLHGGTGIPT-KDIQKAIPFGTA 228 (286)
T ss_pred CHHHHHHHHHHHCCCEEEeeccccccccCCCCCCCHHHHHHHHH---HHCCCEEEeCCCCCCH-HHHHHHHHCCCe
Confidence 3456666776789998876554 233 34566777777643 4589999998554322 335555566654
No 221
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=41.17 E-value=21 Score=31.21 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=23.4
Q ss_pred cccccccccc-cCCCCChhhHHHHHHHHHhCCcEEEecc
Q 009282 108 IDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDF 145 (538)
Q Consensus 108 ID~H~H~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~d~ 145 (538)
||.|+|...+ ..|..+++++ ...+.+.|++++.-+
T Consensus 1 iDlH~HT~~s~~dg~~~~~e~---v~~A~~~Gl~~i~iT 36 (175)
T PF02811_consen 1 IDLHVHTKYSILDGKDSPEEY---VEQAKEKGLDAIAIT 36 (175)
T ss_dssp EEEEB--TTTSSTSSSSHHHH---HHHHHHTTESEEEEE
T ss_pred CCccccccCcchhhcCCHHHH---HHHHHHcCCCEEEEc
Confidence 7999998776 3344444444 788999999987733
No 222
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=41.12 E-value=1.2e+02 Score=29.47 Aligned_cols=131 Identities=14% Similarity=0.082 Sum_probs=76.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHH-HHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+-+....+-+.+++.+...+-- ...........+.+.. +...|++.+.|+..|....... +.+..++..|.++...
T Consensus 25 ~n~e~~~avi~AAe~~~sPvIlq-~~~~~~~~~~~~~~~~~~~~~a~~~~vPValHLDH~~~~-e~i~~ai~~GftSVM~ 102 (287)
T PF01116_consen 25 YNLETARAVIEAAEELNSPVILQ-ISPSEVKYMGLEYLAAMVKAAAEEASVPVALHLDHGKDF-EDIKRAIDAGFTSVMI 102 (287)
T ss_dssp SSHHHHHHHHHHHHHTTS-EEEE-EEHHHHHHHHHHHHHHHHHHHHHHSTSEEEEEEEEE-SH-HHHHHHHHHTSSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-cchhhhhhhhHHHHHHHHHHHHHHcCCCEEeecccCCCH-HHHHHHHHhCcccccc
Confidence 34455666666665555555422 1211111123344444 4466788999999999655443 5556667779988776
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEE--EeccC---------------HHHHHHHHHHHHcCCcEEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV--VHVMS---------------MDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~--~h~~~---------------~~~~~~i~~~~~~g~~v~~ 312 (538)
.....|.........++.++++..|..+-. .|... .++.+..+..++.|+...+
T Consensus 103 DgS~l~~eeNi~~T~~vv~~ah~~gv~VEaElG~i~g~ed~~~~~~~~~~~~TdP~~a~~Fv~~TgvD~LA 173 (287)
T PF01116_consen 103 DGSALPFEENIAITREVVEYAHAYGVSVEAELGHIGGKEDGIESEEETESLYTDPEEAKEFVEETGVDALA 173 (287)
T ss_dssp E-TTS-HHHHHHHHHHHHHHHHHTT-EEEEEESBSSSSCTTCSSSTT-TTCSSSHHHHHHHHHHHTTSEEE
T ss_pred cCCcCCHHHHHHHHHHHHHhhhhhCCEEEEEeeeeeccCCCccccccccccccCHHHHHHHHHHhCCCEEE
Confidence 666778787888888999999998876643 22220 1222455556778876543
No 223
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=39.82 E-value=2.8e+02 Score=25.20 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=58.6
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (538)
.+.++.....+.++..|++.+--... .....+.++...+..+...+.. .+-.+. +..+... +.|++++-
T Consensus 13 ~~~~~a~~ia~al~~gGi~~iEit~~--tp~a~~~I~~l~~~~~~~~vGA-----GTVl~~---e~a~~ai-~aGA~Fiv 81 (201)
T PRK06015 13 DDVEHAVPLARALAAGGLPAIEITLR--TPAALDAIRAVAAEVEEAIVGA-----GTILNA---KQFEDAA-KAGSRFIV 81 (201)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC--CccHHHHHHHHHHHCCCCEEee-----EeCcCH---HHHHHHH-HcCCCEEE
Confidence 35667777788899999997764322 2235566666655544322222 222222 2334444 67887762
Q ss_pred EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009282 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (538)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~ 242 (538)
++-.-.++++.|+++++++.--+-+..++.
T Consensus 82 -----------SP~~~~~vi~~a~~~~i~~iPG~~TptEi~ 111 (201)
T PRK06015 82 -----------SPGTTQELLAAANDSDVPLLPGAATPSEVM 111 (201)
T ss_pred -----------CCCCCHHHHHHHHHcCCCEeCCCCCHHHHH
Confidence 333445567788999999887666665443
No 224
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=39.78 E-value=3.5e+02 Score=25.99 Aligned_cols=113 Identities=13% Similarity=0.037 Sum_probs=60.8
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|++++-+.-.......++.++-+++++.+.+. ..++.+++.. ..+.-+..+.+.+.|.....-..+.-....+
T Consensus 30 ~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 109 (285)
T TIGR00674 30 ENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATEEAISLTKFAEDVGADGFLVVTPYYNKPTQ 109 (285)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCccHHHHHHHHHHHHHcCCCEEEEcCCcCCCCCH
Confidence 6788887543333334566777777777655433 4678888743 3334445556667776543211111111122
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
.+-++....++...+.++.+.+..... ..+.+.++.+.
T Consensus 110 ~~i~~~~~~i~~~~~~pi~lYn~P~~tg~~l~~~~l~~L~~~ 151 (285)
T TIGR00674 110 EGLYQHFKAIAEEVDLPIILYNVPSRTGVSLYPETVKRLAEE 151 (285)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECcHHhcCCCCHHHHHHHHcC
Confidence 233344444566667888887764311 23667767644
No 225
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=39.66 E-value=5.3e+02 Score=27.99 Aligned_cols=156 Identities=14% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+..-...+..+|+..++-....++. .....++...+.+......+.+........+...+..+.+. +.|++.+-+-
T Consensus 99 v~~~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~~i~yt~~p~~~~~~~~~~a~~l~-~~Gad~i~i~-- 175 (593)
T PRK14040 99 VERFVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQGTLSYTTSPVHTLQTWVDLAKQLE-DMGVDSLCIK-- 175 (593)
T ss_pred HHHHHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEEEEEEeeCCccCHHHHHHHHHHHH-HcCCCEEEEC--
Q ss_pred eCCCccCCHHHHHHHHHHHHh-cCCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC
Q 009282 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 283 (538)
.-.-...+..+.+++...++ .++++.+|+ .+....-...-...+.|......-....-.......++.++......+
T Consensus 176 -Dt~G~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~GlA~An~laAieAGa~~vD~ai~glG~~~Gn~~le~vv~~L~~~~ 254 (593)
T PRK14040 176 -DMAGLLKPYAAYELVSRIKKRVDVPLHLHCHATTGLSTATLLKAIEAGIDGVDTAISSMSMTYGHSATETLVATLEGTE 254 (593)
T ss_pred -CCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCchHHHHHHHHHHcCCCEEEeccccccccccchhHHHHHHHHHhcC
Q ss_pred CCE
Q 009282 284 TPL 286 (538)
Q Consensus 284 ~~~ 286 (538)
...
T Consensus 255 ~~~ 257 (593)
T PRK14040 255 RDT 257 (593)
T ss_pred CCc
No 226
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=39.61 E-value=3.2e+02 Score=25.51 Aligned_cols=34 Identities=29% Similarity=0.306 Sum_probs=25.8
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEec
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHID 144 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d 144 (538)
.+|.|+|...+ -|..++++. ++.+...|...+.-
T Consensus 2 ~~D~H~HT~~s-dg~~~~~e~---~~~A~~~g~~~~~i 35 (237)
T COG1387 2 KIDLHTHTVFS-DGEATPEEM---VEAAIELGLEYIAI 35 (237)
T ss_pred CcccccCcccc-cCCCCHHHH---HHHHHHcCCeEEEE
Confidence 47999999887 555555544 78889999998873
No 227
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=39.37 E-value=3.4e+02 Score=25.83 Aligned_cols=106 Identities=15% Similarity=0.086 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCcc--CCHHHHHHHHHHHHhcCCeEEEEcCChh-hHHHHHHHHHHcCCCCccccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~ 260 (538)
....+++.. ..|++.+...+.. |... ...+.+.++++.|+++|+++..++.-.. .+...
T Consensus 99 ~~~~ve~ai-~lgadAV~~~Vy~-Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~---------------- 160 (265)
T COG1830 99 LVATVEDAI-RLGADAVGATVYV-GSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDE---------------- 160 (265)
T ss_pred eeeeHHHHH-hCCCcEEEEEEec-CCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCccccc----------------
Confidence 344555656 6788888755432 2211 1245666788899999999999884321 11000
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHH-HHHcCCcEEEe
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAK-ARKAGQRVIGE 313 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~-~~~~g~~v~~~ 313 (538)
.....+.+..+.+++.++|.+++=+...... +.+++ ....+++|+..
T Consensus 161 ----~~~d~~~v~~aaRlaaelGADIiK~~ytg~~--e~F~~vv~~~~vpVvia 208 (265)
T COG1830 161 ----YHRDADLVGYAARLAAELGADIIKTKYTGDP--ESFRRVVAACGVPVVIA 208 (265)
T ss_pred ----ccccHHHHHHHHHHHHHhcCCeEeecCCCCh--HHHHHHHHhCCCCEEEe
Confidence 0122466788889999999998776665433 23332 34556776543
No 228
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=39.09 E-value=4e+02 Score=26.89 Aligned_cols=119 Identities=17% Similarity=0.110 Sum_probs=68.2
Q ss_pred CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee---e-e---ecCChhhHHH-HHHHH
Q 009282 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM---A-I---TKWDEVVSDE-MEVMV 192 (538)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~---~~~~~~~~~~-~~~~~ 192 (538)
..+++.+....+.+...|+|.++-.++..+......+....+.....+.+...+. . + .....-...+ ++++.
T Consensus 89 ~Ls~eeI~~~~~~~~~~G~~Evli~gG~~p~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s~~E~l~~Lk 168 (370)
T COG1060 89 TLSPEEILEEVREAVKRGITEVLIVGGEHPELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLSYEEVLKRLK 168 (370)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEecCcCCCcchHHHHHHHHHHHHhCcchhhcccCHHHhHHHHhccCCCHHHHHHHHH
Confidence 4688899888999999999999876655544333333333332221111221110 0 0 0011112233 55555
Q ss_pred HHcCCcEEEEEeee---------CCCccCCHHHHHHHHHHHHhcCCe-----EEEEcCChhh
Q 009282 193 KEKGINSFKFFMAY---------KGSFMINDELLIEGFKRCKSLGAL-----AMVHAENGDA 240 (538)
Q Consensus 193 ~~~g~~~ik~~~~~---------~~~~~~~~~~l~~~~~~A~~~g~~-----v~~H~~~~~~ 240 (538)
..|.+.+-.+.+- +..+..+.+..-++.+.|++.|++ +.+|.++...
T Consensus 169 -~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed 229 (370)
T COG1060 169 -EAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLEIHERAHRLGIPTTATMLLGHVETRED 229 (370)
T ss_pred -HcCCCcCcCcceeechHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEEecCCHHH
Confidence 7787766433221 234566788888999999999884 5677777544
No 229
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=38.65 E-value=3.9e+02 Score=26.16 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCcEEEEEee-eCC------CccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-YKG------SFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~------~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
.++..+..++.|++.+.+... .|| .+.++.+.|+++- +..++|++.|-...
T Consensus 157 PeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~L~f~~L~~I~---~~~~iPLVLHGgSG 214 (307)
T PRK05835 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVK---RLTNIPLVLHGASA 214 (307)
T ss_pred HHHHHHHHHhhCCCEEEEccCccccccCCCCCCccCHHHHHHHH---HHhCCCEEEeCCCC
Confidence 456666776789998876554 233 3446677777763 34589999998544
No 230
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=37.89 E-value=3.9e+02 Score=25.99 Aligned_cols=123 Identities=14% Similarity=0.049 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcc
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~ 257 (538)
+..+++-+..-+.|.+++-+.-.....+.++.++-.++++.+.+. ..++.+++. +..+.-+..+.+.+.|..+..
T Consensus 25 ~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g~~~t~eai~lak~a~~~Gad~il 104 (299)
T COG0329 25 EALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVGSNSTAEAIELAKHAEKLGADGIL 104 (299)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecCCCcHHHHHHHHHHHHhcCCCEEE
Confidence 344444443336788877554333334667888888887776643 356888773 334455566677777876543
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
-..+.-....+....+....++...+.++++....... ..+.+.++++
T Consensus 105 ~v~PyY~k~~~~gl~~hf~~ia~a~~lPvilYN~P~~tg~~l~~e~i~~la~ 156 (299)
T COG0329 105 VVPPYYNKPSQEGLYAHFKAIAEAVDLPVILYNIPSRTGVDLSPETIARLAE 156 (299)
T ss_pred EeCCCCcCCChHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 22111111223344555555666678888877653221 2366776765
No 231
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=37.77 E-value=3.8e+02 Score=25.84 Aligned_cols=111 Identities=6% Similarity=-0.038 Sum_probs=58.8
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
+.|++++-+.-+......++.++-.++++.+.+. ++++.+|+.. ..+.-+..+.+.+.|.....--.+.-....+.
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~~Gad~v~~~pP~y~~~~~~ 111 (289)
T cd00951 32 SYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEKAGADGILLLPPYLTEAPQE 111 (289)
T ss_pred HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 6788887554333334566777777777655432 5778888742 23333444556677765432211111111222
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccC--HHHHHHHHHHHH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHVMS--MDAMEEIAKARK 305 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~~~--~~~~~~i~~~~~ 305 (538)
.-++....++...+.++.+.+... .+ .+.+.++.+
T Consensus 112 ~i~~~f~~v~~~~~~pi~lYn~~g~~l~-~~~l~~L~~ 148 (289)
T cd00951 112 GLYAHVEAVCKSTDLGVIVYNRANAVLT-ADSLARLAE 148 (289)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCC-HHHHHHHHh
Confidence 223334445555678887776432 22 366777764
No 232
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=36.81 E-value=3.3e+02 Score=24.82 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=58.6
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (538)
.+.++.....+.+...|++.+--... .....+.++...+..++..+.. .+-.+ .+..+... +.|++++
T Consensus 17 ~~~e~a~~~~~al~~~Gi~~iEit~~--t~~a~~~i~~l~~~~~~~~vGA-----GTVl~---~~~a~~a~-~aGA~Fi- 84 (204)
T TIGR01182 17 DDVDDALPLAKALIEGGLRVLEVTLR--TPVALDAIRLLRKEVPDALIGA-----GTVLN---PEQLRQAV-DAGAQFI- 84 (204)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--CccHHHHHHHHHHHCCCCEEEE-----EeCCC---HHHHHHHH-HcCCCEE-
Confidence 45667777788899999997763322 2235566666665544322222 22222 23344445 6788887
Q ss_pred EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009282 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (538)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~ 242 (538)
++ +-.-.++++.|+++|+++.--+-+..++.
T Consensus 85 --vs--------P~~~~~v~~~~~~~~i~~iPG~~TptEi~ 115 (204)
T TIGR01182 85 --VS--------PGLTPELAKHAQDHGIPIIPGVATPSEIM 115 (204)
T ss_pred --EC--------CCCCHHHHHHHHHcCCcEECCCCCHHHHH
Confidence 22 22234677888999999887666665443
No 233
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=36.78 E-value=3.8e+02 Score=25.56 Aligned_cols=110 Identities=10% Similarity=0.019 Sum_probs=59.8
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHhcccceeeeeeeeeecC-ChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKW-DEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 192 (538)
+..+.+.+......++..|+..+.-.+..+.. ... +.++...+... .. .....+.... ..+..+..+. +
T Consensus 13 g~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~-~~--~~vi~gv~~~~~~~~i~~a~~-a 88 (281)
T cd00408 13 GEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVA-GR--VPVIAGVGANSTREAIELARH-A 88 (281)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhC-CC--CeEEEecCCccHHHHHHHHHH-H
Confidence 45667777777888899999998866543332 222 22233333222 11 1122222222 2333333333 3
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
++.|++.+-+..-+ ....+.+.+.+.+. .+...++++.++-
T Consensus 89 ~~~Gad~v~v~pP~--y~~~~~~~~~~~~~~ia~~~~~pi~iYn 130 (281)
T cd00408 89 EEAGADGVLVVPPY--YNKPSQEGIVAHFKAVADASDLPVILYN 130 (281)
T ss_pred HHcCCCEEEECCCc--CCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 47899998764322 23346667766654 4555789998875
No 234
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=36.65 E-value=4.1e+02 Score=26.95 Aligned_cols=97 Identities=19% Similarity=0.235 Sum_probs=58.7
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (538)
-..+.++++..|....-+-..+ | ...+++.+++.++.-........+|+++...+.
T Consensus 92 G~R~~~ia~~~g~~v~~~~~~w-g-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---------------------- 147 (383)
T COG0075 92 GERFAEIAERYGAEVVVLEVEW-G-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---------------------- 147 (383)
T ss_pred HHHHHHHHHHhCCceEEEeCCC-C-CCCCHHHHHHHHhcCCCccEEEEEeccCccccc----------------------
Confidence 3456666767787776554432 2 446899999999866677888999998764321
Q ss_pred chHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEE
Q 009282 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 265 ~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~ 312 (538)
..+.++-++++..+..+++.-.++... ..++ +.+-|+.+..
T Consensus 148 -----npl~~I~~~~k~~g~l~iVDaVsS~Gg-~~~~-vd~wgiDv~i 188 (383)
T COG0075 148 -----NPLKEIAKAAKEHGALLIVDAVSSLGG-EPLK-VDEWGIDVAI 188 (383)
T ss_pred -----CcHHHHHHHHHHcCCEEEEEecccCCC-cccc-hhhcCccEEE
Confidence 224445555666676666555554332 2222 4445555543
No 235
>TIGR00284 dihydropteroate synthase-related protein. This protein has been found so far only in the Archaea, and in particular in those archaea that lack a bacterial-type dihydropteroate synthase. The central region of this protein shows considerable homology to the amino-terminal half of dihydropteroate synthases, while the carboxyl-terminal region shows homology to the small, uncharacterized protein slr0651 of Synechocystis PCC6803.
Probab=36.30 E-value=5.4e+02 Score=27.17 Aligned_cols=118 Identities=15% Similarity=0.175 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+..+....+. +.|++.+.+.... .....+.+..+++..++. +.++.+...+...+...++ .|..-..
T Consensus 166 ~i~~~A~~~~-~~GADIIDIG~~s---t~p~~~~v~~~V~~l~~~~~~pISIDT~~~~v~eaAL~----aGAdiIN---- 233 (499)
T TIGR00284 166 GIEGLAARME-RDGADMVALGTGS---FDDDPDVVKEKVKTALDALDSPVIADTPTLDELYEALK----AGASGVI---- 233 (499)
T ss_pred HHHHHHHHHH-HCCCCEEEECCCc---CCCcHHHHHHHHHHHHhhCCCcEEEeCCCHHHHHHHHH----cCCCEEE----
Confidence 3444555555 7899999775432 122455688888888776 8999999988866555553 3533111
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH----HHHHHHHHHHHcCC-cEEEeccc
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM----DAMEEIAKARKAGQ-RVIGEPVV 316 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~----~~~~~i~~~~~~g~-~v~~~~~~ 316 (538)
.. +.....+++.+....+..+++.|.... .-.+.++.+.+.|+ .++.+|..
T Consensus 234 ---sV-s~~~~d~~~~l~a~~g~~vVlm~~~~~~~~~~l~~~ie~a~~~Gi~~IIlDPgl 289 (499)
T TIGR00284 234 ---MP-DVENAVELASEKKLPEDAFVVVPGNQPTNYEELAKAVKKLRTSGYSKVAADPSL 289 (499)
T ss_pred ---EC-CccchhHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHCCCCcEEEeCCC
Confidence 00 112344667778888999999886521 12356677888898 67777664
No 236
>PRK07535 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
Probab=36.14 E-value=3.9e+02 Score=25.43 Aligned_cols=121 Identities=17% Similarity=0.117 Sum_probs=67.7
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
.+...++. +.|++.+.+-.... ..-..+.+..+++..++ .+.++.+.......++..++.+. |..-.-. .
T Consensus 28 ~~~A~~~~-~~GAdiIDVg~~~~--~~eE~~r~~~~v~~l~~~~~~plsIDT~~~~v~eaaL~~~~--G~~iINs----I 98 (261)
T PRK07535 28 QKLALKQA-EAGADYLDVNAGTA--VEEEPETMEWLVETVQEVVDVPLCIDSPNPAAIEAGLKVAK--GPPLINS----V 98 (261)
T ss_pred HHHHHHHH-HCCCCEEEECCCCC--chhHHHHHHHHHHHHHHhCCCCEEEeCCCHHHHHHHHHhCC--CCCEEEe----C
Confidence 34445555 77998887754321 11124456666766654 48899988888766665554422 3221000 0
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEeccC------H-----HHHHHHHHHHHcCC---cEEEeccc
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQ---RVIGEPVV 316 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~------~-----~~~~~i~~~~~~g~---~v~~~~~~ 316 (538)
..+.+...+.+.++...+.++++.|... . ...+.++.+.+.|+ .++.+|..
T Consensus 99 --s~~~~~~~~~~~l~~~~g~~vv~m~~~~~g~P~t~~~~~~~l~~~v~~a~~~GI~~~~IilDPgi 163 (261)
T PRK07535 99 --SAEGEKLEVVLPLVKKYNAPVVALTMDDTGIPKDAEDRLAVAKELVEKADEYGIPPEDIYIDPLV 163 (261)
T ss_pred --CCCCccCHHHHHHHHHhCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCC
Confidence 0001123456677788899998888631 1 11244555677887 56666653
No 237
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=35.63 E-value=3.9e+02 Score=25.37 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=58.2
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCc---cCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~A~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
+.+.-+.+++.|.+.+.+.++..... ..+.+.+.++.+.+.++ ++.+.+|....... . +.
T Consensus 12 l~~~l~~a~~~G~d~vEl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~------------~----~~ 75 (279)
T cd00019 12 LENALKRAKEIGFDTVAMFLGNPRSWLSRPLKKERAEKFKAIAEEGPSICLSVHAPYLINL------------A----SP 75 (279)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCCccCCCCCCHHHHHHHHHHHHHcCCCcEEEEcCceecc------------C----CC
Confidence 33444445588999988776543222 23568888888888888 88999987432100 0 00
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.........+.+.++++++..+|.+.+..|...
T Consensus 76 ~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~ 108 (279)
T cd00019 76 DKEKREKSIERLKDEIERCEELGIRLLVFHPGS 108 (279)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 000012234667888999999999887777654
No 238
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=35.23 E-value=4.5e+02 Score=25.88 Aligned_cols=30 Identities=13% Similarity=-0.043 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAV 241 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~ 241 (538)
.+.+...++++.|++.|+.+..-..+...+
T Consensus 87 ~p~e~~~~Lke~a~~~Gi~~~SSPfd~~sv 116 (347)
T COG2089 87 TPLEWHAQLKEYARKRGIIFFSSPFDLTAV 116 (347)
T ss_pred CCHHHHHHHHHHHHHcCeEEEecCCCHHHH
Confidence 467777889999999999888877665444
No 239
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=34.23 E-value=6.3e+02 Score=27.32 Aligned_cols=175 Identities=13% Similarity=0.016 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+..-.+.++.+|+..++-....++. +....++...+.+........+.. .+..+.+...++.+.+.+.|++.+-+-
T Consensus 93 v~~~v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~-~p~~~~~~~~~~~~~~~~~Gad~I~i~-- 169 (582)
T TIGR01108 93 VERFVKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISYTT-SPVHTLETYLDLAEELLEMGVDSICIK-- 169 (582)
T ss_pred HHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEecc-CCCCCHHHHHHHHHHHHHcCCCEEEEC--
Q ss_pred eCCCccCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC
Q 009282 206 YKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 283 (538)
.-.-...+..+.+++...++. ++++..|+ .+....-...-...+.|......-....-.......++.++......+
T Consensus 170 -Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAveaGa~~vd~ai~GlG~~tGn~~le~vv~~L~~~g 248 (582)
T TIGR01108 170 -DMAGILTPKAAYELVSALKKRFGLPVHLHSHATTGMAEMALLKAIEAGADGIDTAISSMSGGTSHPPTETMVAALRGTG 248 (582)
T ss_pred -CCCCCcCHHHHHHHHHHHHHhCCCceEEEecCCCCcHHHHHHHHHHhCCCEEEeccccccccccChhHHHHHHHHHhcC
Q ss_pred CCEEEEeccCHHHHHHHHHHHH
Q 009282 284 TPLYVVHVMSMDAMEEIAKARK 305 (538)
Q Consensus 284 ~~~~~~h~~~~~~~~~i~~~~~ 305 (538)
...-+..-......+.+..+++
T Consensus 249 ~~tgid~~~L~~l~~~~~~v~~ 270 (582)
T TIGR01108 249 YDTGLDIELLLEIAAYFREVRK 270 (582)
T ss_pred CCcccCHHHHHHHHHHHHHHHH
No 240
>PLN02417 dihydrodipicolinate synthase
Probab=33.94 E-value=4.3e+02 Score=25.33 Aligned_cols=112 Identities=13% Similarity=0.003 Sum_probs=58.6
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHHHHc
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKEK 195 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (538)
+..+.+.+.......+..||..++-.+..+.. ...+..+..........-......+... ...+..+..+.. ++.
T Consensus 17 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~~a~~a-~~~ 95 (280)
T PLN02417 17 GRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTGSNSTREAIHATEQG-FAV 95 (280)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEEECCCccHHHHHHHHHHH-HHc
Confidence 45567777777888899999999866543332 2222222221111110001112222222 223444444443 478
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
|++.+-+..-+ ....+.+.+.+.++...+.. ++.++-
T Consensus 96 Gadav~~~~P~--y~~~~~~~i~~~f~~va~~~-pi~lYn 132 (280)
T PLN02417 96 GMHAALHINPY--YGKTSQEGLIKHFETVLDMG-PTIIYN 132 (280)
T ss_pred CCCEEEEcCCc--cCCCCHHHHHHHHHHHHhhC-CEEEEE
Confidence 99988664332 23346788877776654455 777663
No 241
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=33.68 E-value=1.5e+02 Score=26.52 Aligned_cols=103 Identities=19% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHH-
Q 009282 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLE- 268 (538)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 268 (538)
+.+++.|.+.+.+..............+.++.+.++++|+.+..+...... ......
T Consensus 2 ~~~~~~G~~~vE~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~----------------------~~~~~~~ 59 (213)
T PF01261_consen 2 EAAAEAGFDGVELRFDDGQPWDEKDDEAEELRRLLEDYGLKIASLHPPTNF----------------------WSPDEEN 59 (213)
T ss_dssp HHHHHTTHSEEEEEHHHHSHHTHHHHHHHHHHHHHHHTTCEEEEEEEEESS----------------------SCTGTTS
T ss_pred hHHHHcCCCEEEEecCCCcccccchHHHHHHHHHHHHcCCeEEEEeccccc----------------------ccccccc
Q ss_pred ----------HHHHHHHHHHHHHcCCCEEEEecc-------------------CHHHHHHHHHHHHcCCcEEEeccc
Q 009282 269 ----------GEATTRAIRLAEFVNTPLYVVHVM-------------------SMDAMEEIAKARKAGQRVIGEPVV 316 (538)
Q Consensus 269 ----------~~~i~~~l~~~~~~~~~~~~~h~~-------------------~~~~~~~i~~~~~~g~~v~~~~~~ 316 (538)
.+.+.+.++++..+|.+....|.. ... +..+.+++.|+.+..++.+
T Consensus 60 ~~~~~~r~~~~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~--~l~~~a~~~gv~i~lE~~~ 134 (213)
T PF01261_consen 60 GSANDEREEALEYLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENWERLAENLR--ELAEIAEEYGVRIALENHP 134 (213)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHHHHHHHHHH--HHHHHHHHHTSEEEEE-SS
T ss_pred cCcchhhHHHHHHHHHHHHHHHHhCCCceeecCcccccccCCCHHHHHHHHHHHHH--HHHhhhhhhcceEEEeccc
No 242
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=33.62 E-value=5.3e+02 Score=26.21 Aligned_cols=23 Identities=13% Similarity=0.091 Sum_probs=17.7
Q ss_pred HHHHHHHHhCCcEEEecccCCCC
Q 009282 128 FSGQAAALAGGTTMHIDFVIPIN 150 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~ 150 (538)
..-++.++.+|--|++|....++
T Consensus 80 ~~K~~~A~~~GADtiMDLStGgd 102 (423)
T TIGR00190 80 VEKALIAIKYGADTVMDLSTGGD 102 (423)
T ss_pred HHHHHHHHHcCCCeEeeccCCCC
Confidence 34467789999999999966544
No 243
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=33.62 E-value=4.3e+02 Score=25.26 Aligned_cols=110 Identities=13% Similarity=-0.016 Sum_probs=59.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (538)
+..+.+.+......++..|+..+.-.+..+.. .. .+.++...+... . ......+... ..++.++..+..
T Consensus 16 g~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~-~--~~~vi~gv~~~~~~~~~~~a~~a- 91 (284)
T cd00950 16 GSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVN-G--RVPVIAGTGSNNTAEAIELTKRA- 91 (284)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhC-C--CCcEEeccCCccHHHHHHHHHHH-
Confidence 45566777777888899999998866443322 22 222232332222 1 1112222222 223444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
.+.|++.+-+..- .....+.+.+.+.++. +...++++..+-
T Consensus 92 ~~~G~d~v~~~~P--~~~~~~~~~l~~~~~~ia~~~~~pi~lYn 133 (284)
T cd00950 92 EKAGADAALVVTP--YYNKPSQEGLYAHFKAIAEATDLPVILYN 133 (284)
T ss_pred HHcCCCEEEEccc--ccCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4789998866532 2233456777666644 556789999874
No 244
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=32.92 E-value=3.5e+02 Score=26.57 Aligned_cols=89 Identities=22% Similarity=0.174 Sum_probs=52.5
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccC-CCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHH
Q 009282 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVI-PINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (538)
Q Consensus 108 ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (538)
=|-|.|+..+ |....+. .++.+..+|.--++-+.. +........++.. ..+.....+.|+-.+..+..++...
T Consensus 109 ~~fHiHLYT~--g~~~~~e---~l~~L~eAGLDEIRfHp~~~~~~~~e~~i~~l-~~A~~~g~dvG~EiPaipg~e~~i~ 182 (353)
T COG2108 109 EDFHIHLYTT--GILATEE---ALKALAEAGLDEIRFHPPRPGSKSSEKYIENL-KIAKKYGMDVGVEIPAIPGEEEAIL 182 (353)
T ss_pred cceeEEEeec--cccCCHH---HHHHHHhCCCCeEEecCCCccccccHHHHHHH-HHHHHhCccceeecCCCcchHHHHH
Confidence 4689999886 4333332 266777899998885532 1111222333332 2223455677777666666666677
Q ss_pred HHHHHHHHcCCcEEEE
Q 009282 187 EMEVMVKEKGINSFKF 202 (538)
Q Consensus 187 ~~~~~~~~~g~~~ik~ 202 (538)
++.+++.+.+.+++.+
T Consensus 183 e~~~~~~~~~~~FlNi 198 (353)
T COG2108 183 EFAKALDENGLDFLNI 198 (353)
T ss_pred HHHHHHHhcccceeee
Confidence 7777776777666643
No 245
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=32.78 E-value=3.8e+02 Score=24.28 Aligned_cols=100 Identities=13% Similarity=0.113 Sum_probs=59.1
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (538)
.+.++.....++++..|++.+--... .....+.++...+..+...+..| +-.+ .+..+... +.|++++-
T Consensus 17 ~~~~~a~~~~~al~~gGi~~iEiT~~--t~~a~~~I~~l~~~~p~~~vGAG-----TV~~---~e~a~~a~-~aGA~Fiv 85 (196)
T PF01081_consen 17 DDPEDAVPIAEALIEGGIRAIEITLR--TPNALEAIEALRKEFPDLLVGAG-----TVLT---AEQAEAAI-AAGAQFIV 85 (196)
T ss_dssp SSGGGHHHHHHHHHHTT--EEEEETT--STTHHHHHHHHHHHHTTSEEEEE-----S--S---HHHHHHHH-HHT-SEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecC--CccHHHHHHHHHHHCCCCeeEEE-----eccC---HHHHHHHH-HcCCCEEE
Confidence 45677777888999999997654322 22456777766666555333332 2222 23344444 67888772
Q ss_pred EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHH
Q 009282 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (538)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~ 243 (538)
++-.-.++++.|+++++++.--+-+..++..
T Consensus 86 -----------SP~~~~~v~~~~~~~~i~~iPG~~TptEi~~ 116 (196)
T PF01081_consen 86 -----------SPGFDPEVIEYAREYGIPYIPGVMTPTEIMQ 116 (196)
T ss_dssp -----------ESS--HHHHHHHHHHTSEEEEEESSHHHHHH
T ss_pred -----------CCCCCHHHHHHHHHcCCcccCCcCCHHHHHH
Confidence 3334456778899999999988888765543
No 246
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=32.60 E-value=2.7e+02 Score=25.21 Aligned_cols=75 Identities=21% Similarity=0.196 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCc
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (538)
+....+.+..|.+.+|+|.-. | ....++++.+.++|.+.|+.+ --..+-+
T Consensus 138 etAiaml~dmG~~SiKffPm~-G--l~~leE~~avAkA~a~~g~~l-EPTGGId-------------------------- 187 (218)
T PF07071_consen 138 ETAIAMLKDMGGSSIKFFPMG-G--LKHLEELKAVAKACARNGFTL-EPTGGID-------------------------- 187 (218)
T ss_dssp HHHHHHHHHTT--EEEE---T-T--TTTHHHHHHHHHHHHHCT-EE-EEBSS----------------------------
T ss_pred HHHHHHHHHcCCCeeeEeecC-C--cccHHHHHHHHHHHHHcCcee-CCcCCcC--------------------------
Confidence 334445558899999998532 1 236899999999999999998 2222110
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.+.+.+.++.+...|.+.++.|..+
T Consensus 188 ---l~N~~~I~~i~l~aGv~~viPHiYs 212 (218)
T PF07071_consen 188 ---LDNFEEIVKICLDAGVEKVIPHIYS 212 (218)
T ss_dssp ---TTTHHHHHHHHHHTT-S-B--EE-G
T ss_pred ---HHHHHHHHHHHHHcCCCeeccchhh
Confidence 1335556666666677667777643
No 247
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=32.39 E-value=1.7e+02 Score=29.55 Aligned_cols=41 Identities=17% Similarity=0.080 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEc-CChhhHHHHHHHHHHcCCCCcc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~-~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
..+.++++++.|+++|+++..|. +.... ++.+...|+...+
T Consensus 207 ~~e~i~~~v~~A~~~G~~v~sH~~~~~e~----i~~a~~~Gv~~~E 248 (376)
T TIGR02318 207 GLANRSEIAALARARGIPLASHDDDTPEH----VAEAHDLGVTISE 248 (376)
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCCCHHH----HHHHHHCCCChhc
Confidence 47899999999999999999999 55543 3444455765433
No 248
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=32.21 E-value=4.4e+02 Score=24.89 Aligned_cols=118 Identities=9% Similarity=-0.002 Sum_probs=64.4
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCC--ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGS--FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~--~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
.+.-+.+++.|.+.+-++...... +..+...++++.+.++++|+.+..+........ .+.. +....
T Consensus 16 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~~~~~~~~~--------~~~~----~~~~~ 83 (275)
T PRK09856 16 EHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYP--------YNMM----LGDEH 83 (275)
T ss_pred HHHHHHHHHcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEecCcccCcC--------cccc----CCCHH
Confidence 333344448899999876432211 123456778888888999999887643110000 0000 00000
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEeccCH------H---------HHHHHHHHHHcCCcEEEecc
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------D---------AMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~------~---------~~~~i~~~~~~g~~v~~~~~ 315 (538)
-.....+.+.+.++++..+|.+.+..|.... . -.+..+.+++.|+.+..++.
T Consensus 84 ~r~~~~~~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~ 150 (275)
T PRK09856 84 MRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPL 150 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 0112235677888999999998877654310 0 01334445667877766643
No 249
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.64 E-value=4.8e+02 Score=25.17 Aligned_cols=112 Identities=15% Similarity=0.043 Sum_probs=57.2
Q ss_pred HcC-CcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchH
Q 009282 194 EKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLL 267 (538)
Q Consensus 194 ~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 267 (538)
..| ++++-+.-.......++.++-.++++.+.+. .+++.+++. +..+..+..+.+.+.|..+..-..+.-....
T Consensus 32 ~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~ 111 (290)
T TIGR00683 32 DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFS 111 (290)
T ss_pred hCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCC
Confidence 567 7776443332333556777777776654432 467788873 3334445555666777654332111111112
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEeccCHH----HHHHHHHHHH
Q 009282 268 EGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 268 ~~~~i~~~l~~~~~~-~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
+.+-+....+++... +.++.+.|..... ..+.+.++.+
T Consensus 112 ~~~i~~yf~~v~~~~~~lpv~lYn~P~~tg~~l~~~~i~~L~~ 154 (290)
T TIGR00683 112 FPEIKHYYDTIIAETGGLNMIVYSIPFLTGVNMGIEQFGELYK 154 (290)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCccccccCcCHHHHHHHhc
Confidence 223333344444444 5788877764311 1366666664
No 250
>PF01964 ThiC: ThiC family; InterPro: IPR002817 ThiC is found within the thiamin biosynthesis operon. ThiC is involved in thiamin biosynthesis []. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis.; GO: 0009228 thiamine biosynthetic process; PDB: 3EPO_A 3EPN_B 3EPM_B.
Probab=31.27 E-value=4.5e+02 Score=26.68 Aligned_cols=144 Identities=13% Similarity=0.015 Sum_probs=64.8
Q ss_pred HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-------eecCC-hhhHHHHHHHHHHcCCcEE
Q 009282 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-------ITKWD-EVVSDEMEVMVKEKGINSF 200 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~g~~~i 200 (538)
.-+..+.+.|.-|++|.....+ +....+...+..+-..-.++++-. ....+ ++..+.+++.+ +.|++++
T Consensus 80 ~K~~~A~~~GADtvMDLStggd--l~~iR~~il~~~~vpvGTVPiYqa~~~~~~~~~~~t~d~~~~~ie~qa-~~GVDfm 156 (420)
T PF01964_consen 80 EKLKIAEKAGADTVMDLSTGGD--LDEIRRAILENSPVPVGTVPIYQAAIRKGGSIVDMTEDDFFDVIEKQA-KDGVDFM 156 (420)
T ss_dssp HHHHHHHHTT-SEEEE---STT--HHHHHHHHHHT-SS-EEE-HHHHHHHHTTT-GGG--HHHHHHHHHHHH-HHT--EE
T ss_pred HHHHHHHHhCCCEEEEcCCCCC--HHHHHHHHHHhCCCccccchHHHHHHHhCCChhhCCHHHHHHHHHHHH-HcCCCEE
Confidence 3466789999999999965543 333333433333222222222211 12222 34555666666 7899988
Q ss_pred EEEeee-------------------------------CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009282 201 KFFMAY-------------------------------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (538)
Q Consensus 201 k~~~~~-------------------------------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (538)
.+...- ++....=.+.+..+++.+++|+..+..--.-.
T Consensus 157 tiH~git~~~~~~~~~~~R~~giVSRGGs~l~~WM~~n~~ENPly~~fD~lLeI~k~yDVtLSLGDglR----------- 225 (420)
T PF01964_consen 157 TIHCGITRETLERLKKSGRIMGIVSRGGSILAAWMLHNGKENPLYEHFDRLLEIAKEYDVTLSLGDGLR----------- 225 (420)
T ss_dssp EE-TT--GGGGGGGT--TSSS----HHHHHHHHHHHHHTS--HHHHTHHHHHHHHTTTT-EEEE--TT------------
T ss_pred EEccchhHHHHHHHhhhccccCccccchHHHHHHHHhcCCcCcHHHhHHHHHHHHHHhCeeEecccccC-----------
Confidence 765431 00011113556677788888877776543110
Q ss_pred HcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe
Q 009282 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h 290 (538)
.+......-+....|...+-++.+.+.+.|+++.+..
T Consensus 226 ----PG~i~Da~D~aQi~EL~~lgeL~~rA~e~gVQvMVEG 262 (420)
T PF01964_consen 226 ----PGCIADATDRAQIQELIILGELVKRAREAGVQVMVEG 262 (420)
T ss_dssp -----SSGGGTT-HHHHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred ----CCCcCCCCcHHHHHHHHHHHHHHHHHHHCCCeEEeeC
Confidence 0000011112223445556677777888888887754
No 251
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=31.03 E-value=4.8e+02 Score=25.01 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=59.2
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHH---HHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (538)
|..+.+.+......++..||..++-.+..+.. ...+. ++...+... ..+ ....+... ..++..+..+. +
T Consensus 14 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~-~~~--~vi~gv~~~s~~~~i~~a~~-a 89 (285)
T TIGR00674 14 GSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVN-GRV--PVIAGTGSNATEEAISLTKF-A 89 (285)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhC-CCC--eEEEeCCCccHHHHHHHHHH-H
Confidence 45566677777788889999998865433322 22222 222222221 111 11222222 22333443333 3
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
++.|++.+-+..-+. ...+.+.+.+.++. +++.++++.++-
T Consensus 90 ~~~Gad~v~v~pP~y--~~~~~~~i~~~~~~i~~~~~~pi~lYn 131 (285)
T TIGR00674 90 EDVGADGFLVVTPYY--NKPTQEGLYQHFKAIAEEVDLPIILYN 131 (285)
T ss_pred HHcCCCEEEEcCCcC--CCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 478999987654332 23466777666644 566788988774
No 252
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=30.77 E-value=4.9e+02 Score=24.99 Aligned_cols=111 Identities=13% Similarity=0.043 Sum_probs=60.9
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHH---HHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (538)
+..+.+.+....+.++..||..+.-.+..+.. ...+. ++...+.... ......+... ...+.++..+...
T Consensus 17 g~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~---~~~vi~gv~~~st~~~i~~a~~a~ 93 (289)
T PF00701_consen 17 GSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAG---RVPVIAGVGANSTEEAIELARHAQ 93 (289)
T ss_dssp SSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTT---SSEEEEEEESSSHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccC---ceEEEecCcchhHHHHHHHHHHHh
Confidence 44566667777888899999998866544332 22222 2222222211 1222222333 2344454444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEcC
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHAE 236 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~~ 236 (538)
+.|++.+-+..-+ ....+.+.+.+.++ .|...++++.++-.
T Consensus 94 -~~Gad~v~v~~P~--~~~~s~~~l~~y~~~ia~~~~~pi~iYn~ 135 (289)
T PF00701_consen 94 -DAGADAVLVIPPY--YFKPSQEELIDYFRAIADATDLPIIIYNN 135 (289)
T ss_dssp -HTT-SEEEEEEST--SSSCCHHHHHHHHHHHHHHSSSEEEEEEB
T ss_pred -hcCceEEEEeccc--cccchhhHHHHHHHHHHhhcCCCEEEEEC
Confidence 7899988764432 23457777777664 46677899998764
No 253
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=30.70 E-value=5e+02 Score=25.02 Aligned_cols=110 Identities=11% Similarity=-0.010 Sum_probs=59.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHH---HHHHHHHHhcccceeeeeeeeeec-CChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (538)
+..+.+.+......++..||..++-.+..+.. ...+ .++...+... .. .....+... ...+.++..+...
T Consensus 17 g~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~-~~--~~vi~gv~~~~~~~~i~~a~~a~ 93 (292)
T PRK03170 17 GSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVN-GR--VPVIAGTGSNSTAEAIELTKFAE 93 (292)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhC-CC--CcEEeecCCchHHHHHHHHHHHH
Confidence 44566677777888899999998855433322 2222 2222333221 11 112222222 2234444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++.+-+..-+ ....+.+.+.+.++. +...++++..+-
T Consensus 94 -~~G~d~v~~~pP~--~~~~~~~~i~~~~~~ia~~~~~pv~lYn 134 (292)
T PRK03170 94 -KAGADGALVVTPY--YNKPTQEGLYQHFKAIAEATDLPIILYN 134 (292)
T ss_pred -HcCCCEEEECCCc--CCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7899988764332 233456777666644 566788888774
No 254
>COG4939 Major membrane immunogen, membrane-anchored lipoprotein [Function unknown]
Probab=30.43 E-value=1.7e+02 Score=24.08 Aligned_cols=16 Identities=25% Similarity=0.461 Sum_probs=13.7
Q ss_pred eeeEEEeCCEEEEecC
Q 009282 70 IADVYVEDGIVVAVQP 85 (538)
Q Consensus 70 ~~~V~I~~grI~~Vg~ 85 (538)
.-.|.|+||+|+++.-
T Consensus 49 f~~iti~dGKiv~~~y 64 (147)
T COG4939 49 FVTITIQDGKIVACTY 64 (147)
T ss_pred eEEEEEeCCEEEEEEe
Confidence 5789999999999864
No 255
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=30.39 E-value=5.2e+02 Score=25.21 Aligned_cols=109 Identities=6% Similarity=-0.027 Sum_probs=60.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeec-CChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITK-WDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 191 (538)
|..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+- .+... ...+..+..+.
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi----~Gv~~~~t~~ai~~a~~- 98 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVF----VGATTLNTRDTIARTRA- 98 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEE----EEeccCCHHHHHHHHHH-
Confidence 45667777777888899999999866543332 22 22222222222 122222 22222 22344444443
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhc-CCeEEEEc
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVHA 235 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~-g~~v~~H~ 235 (538)
+.+.|++.+-+..-+ ....+.+.+.+.++. |... ++++.+.-
T Consensus 99 A~~~Gad~vlv~~P~--y~~~~~~~l~~yf~~va~a~~~lPv~iYn 142 (309)
T cd00952 99 LLDLGADGTMLGRPM--WLPLDVDTAVQFYRDVAEAVPEMAIAIYA 142 (309)
T ss_pred HHHhCCCEEEECCCc--CCCCCHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 447899998765432 233467777777655 5566 58888874
No 256
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=30.37 E-value=5e+02 Score=24.97 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
+...+.+.+..++++|+.+..|..
T Consensus 166 d~~~y~dav~r~rkrgIkvc~HiI 189 (312)
T COG1242 166 DFACYVDAVKRLRKRGIKVCTHLI 189 (312)
T ss_pred chHHHHHHHHHHHHcCCeEEEEEe
Confidence 456666777788888999999983
No 257
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=30.32 E-value=5.6e+02 Score=25.55 Aligned_cols=106 Identities=10% Similarity=0.061 Sum_probs=64.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHH-HhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRC-KSLG-ALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A-~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.+.+....+-+.+++.+...+--. ..........+.+..++..+ ++.. .++.+|....... +.+..+.+.|.++..
T Consensus 26 ~n~e~~~avi~AAee~~sPvIiq~-s~~~~~~~g~~~~~~~~~~~a~~~~~VPValHLDHg~~~-e~i~~ai~~GftSVM 103 (347)
T PRK09196 26 NNLEQVQAIMEAADETDSPVILQA-SAGARKYAGEPFLRHLILAAVEEYPHIPVVMHQDHGNSP-ATCQRAIQLGFTSVM 103 (347)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-CccHhhhCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCH-HHHHHHHHcCCCEEE
Confidence 445556666665555555544221 11111223456677776654 4553 8999999665444 345667778987764
Q ss_pred cccccC-------CchHHHHHHHHHHHHHHHcCCCEE
Q 009282 258 GHALSR-------PPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 258 ~~~~~~-------~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
...... |.........+..++++..|..+-
T Consensus 104 iDgS~l~~~~~~~p~eENI~~Tkevve~Ah~~Gv~VE 140 (347)
T PRK09196 104 MDGSLKADGKTPASYEYNVDVTRKVVEMAHACGVSVE 140 (347)
T ss_pred ecCCCCcccCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 433333 666677788899999988887653
No 258
>PRK08508 biotin synthase; Provisional
Probab=30.30 E-value=5e+02 Score=24.91 Aligned_cols=116 Identities=16% Similarity=0.001 Sum_probs=58.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccccc-------ccCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA-------LSRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~ 266 (538)
+.|+..+-+..+..+......+.+.++++..++.+..+..|+.......+.++.+.+.|+.....-. ...-..
T Consensus 54 ~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p~l~i~~s~G~~~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~ 133 (279)
T PRK08508 54 ANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVPGLHLIACNGTASVEQLKELKKAGIFSYNHNLETSKEFFPKICTT 133 (279)
T ss_pred HCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCCCcEEEecCCCCCHHHHHHHHHcCCCEEcccccchHHHhcCCCCC
Confidence 4566665443222222223456666777777766555555654443345666666666664322100 001112
Q ss_pred HHHHHHHHHHHHHHHcCCCE----EEEeccCHH-HHHHHHHHHHcCCc
Q 009282 267 LEGEATTRAIRLAEFVNTPL----YVVHVMSMD-AMEEIAKARKAGQR 309 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~----~~~h~~~~~-~~~~i~~~~~~g~~ 309 (538)
...+...+.++.++..|.++ ++.|..+.. ..+.+..+++.+..
T Consensus 134 ~~~~~~l~~i~~a~~~Gi~v~sg~I~GlGEt~ed~~~~l~~lr~L~~~ 181 (279)
T PRK08508 134 HTWEERFQTCENAKEAGLGLCSGGIFGLGESWEDRISFLKSLASLSPH 181 (279)
T ss_pred CCHHHHHHHHHHHHHcCCeecceeEEecCCCHHHHHHHHHHHHcCCCC
Confidence 23455666667777777654 344443332 23455556666654
No 259
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=30.29 E-value=4.7e+02 Score=24.60 Aligned_cols=33 Identities=18% Similarity=0.053 Sum_probs=23.8
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 108 ID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
+|.|+|..... ...+.+....+.|.+.|++++.
T Consensus 1 ~D~H~Ht~~s~---d~~~~~ee~v~~A~~~Gl~~i~ 33 (253)
T TIGR01856 1 RDGHSHSPFCA---HGTDTLEEVVQEAIQLGFEEIC 33 (253)
T ss_pred CCcccCcCCCC---CCCCCHHHHHHHHHHcCCCEEE
Confidence 58999986542 2234455668889999999876
No 260
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=30.17 E-value=4.3e+02 Score=24.14 Aligned_cols=53 Identities=8% Similarity=-0.148 Sum_probs=35.1
Q ss_pred HHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 355 ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 355 ~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
..+-++++.++|+....- +.+-+..+..+...-|++.++|..+.|..|-.++.
T Consensus 162 ~rKYd~P~VISS~A~s~~---------------------~lRsPRdl~aL~~~iGme~~ea~~~Ls~~p~~i~~ 214 (216)
T PRK03892 162 VNKYKVPRFITSSAESKW---------------------EVRGPRDLMSLGINIGMEIPQAKASLSFYPRIILK 214 (216)
T ss_pred HHHcCCCEEEecCcchhc---------------------cCCCHHHHHHHHHHhCCCHHHHHHHHHHhHHHHhh
Confidence 344599999999844221 22223333334455679999999999999987654
No 261
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=29.37 E-value=59 Score=20.60 Aligned_cols=16 Identities=25% Similarity=0.573 Sum_probs=12.9
Q ss_pred eeEEEeCCEEEEecCC
Q 009282 71 ADVYVEDGIVVAVQPN 86 (538)
Q Consensus 71 ~~V~I~~grI~~Vg~~ 86 (538)
-.|.|+||+|+.|...
T Consensus 18 V~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 18 VTIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEEECCEEEEEEhh
Confidence 3678899999998754
No 262
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally.
Probab=29.30 E-value=4.9e+02 Score=24.55 Aligned_cols=161 Identities=12% Similarity=0.067 Sum_probs=81.4
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceee--eeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDY--GFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
.+.+++....+.+..+|+..++..... .....+. ........+.. ++..+...........+++.. +.|++.
T Consensus 33 ~~~~~~~~~~~~a~~~~~~~v~~~p~~----~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~al-~~Ga~~ 106 (258)
T TIGR01949 33 KGLVDIRKTVNEVAEGGADAVLLHKGI----VRRGHRG-YGKDVGLIIHLSASTSLSPDPNDKRIVTTVEDAI-RMGADA 106 (258)
T ss_pred CCcCCHHHHHHHHHhcCCCEEEeCcch----hhhcccc-cCCCCcEEEEEcCCCCCCCCCCcceeeeeHHHHH-HCCCCE
Confidence 355677777899999999999854211 1111111 10111111111 111111111112334566666 789998
Q ss_pred EEEEeeeCCCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHH
Q 009282 200 FKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (538)
Q Consensus 200 ik~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~ 278 (538)
+.+........ .-..+.+.++.+.++++|.++.+..... |. |... ...+.+.++.+.
T Consensus 107 v~~~~~~g~~~~~~~~~~~~~i~~~~~~~g~~liv~~~~~-------------Gv-----h~~~----~~~~~~~~~~~~ 164 (258)
T TIGR01949 107 VSIHVNVGSDTEWEQIRDLGMIAEICDDWGVPLLAMMYPR-------------GP-----HIDD----RDPELVAHAARL 164 (258)
T ss_pred EEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEecc-------------Cc-----cccc----ccHHHHHHHHHH
Confidence 87765422110 0123566777888899999988854411 11 1100 012345555566
Q ss_pred HHHcCCCEEEEeccCHHHHHHHHHHHH-cCCcEEE
Q 009282 279 AEFVNTPLYVVHVMSMDAMEEIAKARK-AGQRVIG 312 (538)
Q Consensus 279 ~~~~~~~~~~~h~~~~~~~~~i~~~~~-~g~~v~~ 312 (538)
+.+.|...+-+... ...+.++.+.+ ..++|.+
T Consensus 165 a~~~GADyikt~~~--~~~~~l~~~~~~~~iPVva 197 (258)
T TIGR01949 165 GAELGADIVKTPYT--GDIDSFRDVVKGCPAPVVV 197 (258)
T ss_pred HHHHCCCEEeccCC--CCHHHHHHHHHhCCCcEEE
Confidence 77778777665433 22366666654 4566543
No 263
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype. Members of this family are class II examples of the enzyme fructose-bisphosphate aldolase, an enzyme both of glycolysis and (in the opposite direction) of the Calvin cycle of CO2 fixation. A deep split separates the tightly conserved yeast/E. coli/Mycobacterium subtype (all species lacking the Calvin cycle) represented by model TIGR01520 from a broader group of aldolases that includes both tagatose- and fructose-bisphosphate aldolases. This model represents a distinct, elongated, very well conserved subtype within the latter group. Most species with this aldolase subtype have the Calvin cycle.
Probab=28.98 E-value=5.9e+02 Score=25.38 Aligned_cols=105 Identities=11% Similarity=0.042 Sum_probs=63.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcC-CeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLG-ALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g-~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.+.+....+-+.+++.+...+--. ..........+.+..++. .|++.. .|+..|....... +.+..+++.|.++..
T Consensus 24 ~n~e~~~aii~AAEe~~sPvIlq~-s~~~~~~~g~~~~~~~~~~~ae~~~~VPValHLDHg~~~-e~i~~Ai~~GFtSVM 101 (347)
T TIGR01521 24 NNMEQMRAIMEAADKTDSPVILQA-SRGARSYAGAPFLRHLILAAIEEYPHIPVVMHQDHGNSP-ATCQRAIQLGFTSVM 101 (347)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-CcchhhhCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCH-HHHHHHHHcCCCEEe
Confidence 345555566555545555544221 111112234566666665 455664 8999999665544 456666788987765
Q ss_pred cccccC-------CchHHHHHHHHHHHHHHHcCCCE
Q 009282 258 GHALSR-------PPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 258 ~~~~~~-------~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
...... |.........++.++++..|..+
T Consensus 102 iDgS~l~~~~~~~p~eENI~~Tkevve~Ah~~GvsV 137 (347)
T TIGR01521 102 MDGSLREDAKTPADYDYNVRVTAEVVAFAHAVGASV 137 (347)
T ss_pred ecCcCCcccCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 443333 66777788889999999877655
No 264
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=28.80 E-value=1.2e+02 Score=22.69 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=23.9
Q ss_pred cccEEEECcEEEcCCCc--eeeeEEEeCCEEEEe
Q 009282 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAV 83 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~--~~~~V~I~~grI~~V 83 (538)
.+.+.++|+++++.++. .-+.|.|+|..|..|
T Consensus 42 ~MNl~L~~~~~~~~~~~~~~~~~v~IRG~nI~yI 75 (78)
T cd01733 42 FMNIRLAKVTIIDRNGKQVQVEEIMVTGRNIRYV 75 (78)
T ss_pred CceeEEEEEEEEcCCCceeECCcEEEECCEEEEE
Confidence 45678888888776544 347889999888876
No 265
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=28.64 E-value=2.4e+02 Score=28.04 Aligned_cols=89 Identities=12% Similarity=0.125 Sum_probs=55.5
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCc-cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
...+++.. +.|++++.+.+...+.. .-..+.+.++.++|+++|+++.++..-... .+. .
T Consensus 149 ~~sVedAl-rLGAdAV~~tvy~Gs~~E~~ml~~l~~i~~ea~~~GlPlv~~~YpRG~-----------~i~--------~ 208 (348)
T PRK09250 149 TASVEDAL-RLGAVAVGATIYFGSEESRRQIEEISEAFEEAHELGLATVLWSYLRNS-----------AFK--------K 208 (348)
T ss_pred eecHHHHH-HCCCCEEEEEEecCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecccCc-----------ccC--------C
Confidence 34466666 78999988765432211 113566778889999999999987632211 000 0
Q ss_pred Cc--hHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 264 PP--LLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 264 ~~--~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.. ....+-+..+.+++.++|.+++=+-...
T Consensus 209 ~~d~~~~~d~Ia~AaRiaaELGADIVKv~yp~ 240 (348)
T PRK09250 209 DGDYHTAADLTGQANHLAATIGADIIKQKLPT 240 (348)
T ss_pred cccccccHHHHHHHHHHHHHHcCCEEEecCCC
Confidence 00 0113568888899999998887665543
No 266
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions, like for example 2,3-diketo-5-methylthiopentyl-1-phosphate enolase or 5-methyl
Probab=28.61 E-value=5e+02 Score=26.13 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=57.4
Q ss_pred CCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccc----eeeeeeeeeecCChhhHHHHHHHHH
Q 009282 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSC----MDYGFHMAITKWDEVVSDEMEVMVK 193 (538)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (538)
..+++.+.......+..|+..+.|.....+. ...+.++...+...... -...+....+....+..+..+...
T Consensus 142 gld~~~la~~~~~l~~gGvD~Ikdde~~ge~~~~~~eER~~~v~~av~~a~~~TG~~~~y~~nit~~~~e~i~~a~~a~- 220 (367)
T cd08205 142 GLSPEELAELAYELALGGIDLIKDDELLADQPYAPFEERVRACMEAVRRANEETGRKTLYAPNITGDPDELRRRADRAV- 220 (367)
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeccccccCcccCCHHHHHHHHHHHHHHHHHhhCCcceEEEEcCCCHHHHHHHHHHHH-
Confidence 4567778888888899999999876544433 33344433333222111 111122223333344444444444
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
+.|++.+-+...+.+ ...++.+.+ ..+++++.|....
T Consensus 221 ~~Gad~vmv~~~~~g-----~~~~~~l~~---~~~lpi~~H~a~~ 257 (367)
T cd08205 221 EAGANALLINPNLVG-----LDALRALAE---DPDLPIMAHPAFA 257 (367)
T ss_pred HcCCCEEEEeccccc-----ccHHHHHHh---cCCCeEEEccCcc
Confidence 789988765432211 222333332 2389999998664
No 267
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=28.43 E-value=5.5e+02 Score=24.85 Aligned_cols=66 Identities=26% Similarity=0.292 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCcEEEEEee-eCCC----cc-CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-YKGS----FM-INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-~~~~----~~-~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+... .||. +. ++.+.++++-+ ..+.|++.|-...-.. +.++.+...|+.
T Consensus 160 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~p~~Ld~~~L~~I~~---~v~vPLVlHGgSG~~~-e~~~~ai~~Gi~ 231 (288)
T TIGR00167 160 PEEAKEFVKLTGVDSLAAAIGNVHGVYKGEPKGLDFERLEEIQK---YVNLPLVLHGGSGIPD-EEIKKAISLGVV 231 (288)
T ss_pred HHHHHHHHhccCCcEEeeccCccccccCCCCCccCHHHHHHHHH---HhCCCEEEeCCCCCCH-HHHHHHHHcCCe
Confidence 456667776789998876554 2333 33 56666666643 4489999998554322 335555566654
No 268
>PRK15452 putative protease; Provisional
Probab=28.39 E-value=4.3e+02 Score=27.44 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCC----CccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
++.++... ..|++.+=+.....+ ...++.+.+++.++.|+++|..+.+-.
T Consensus 13 ~e~l~aAi-~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~ 66 (443)
T PRK15452 13 LKNMRYAF-AYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVV 66 (443)
T ss_pred HHHHHHHH-HCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 34444555 678877643221111 123567888888899999888877664
No 269
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=28.17 E-value=5.4e+02 Score=24.62 Aligned_cols=107 Identities=13% Similarity=0.033 Sum_probs=56.2
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeee-eecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
....+.+..+|+..++-....++. .....++...+.+. .+.+..... ....+.+...++.+.+.+.|++.+.+- +
T Consensus 94 ~~di~~~~~~g~~~iri~~~~~~~~~~~~~i~~ak~~G~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 170 (275)
T cd07937 94 ELFVEKAAKNGIDIFRIFDALNDVRNLEVAIKAVKKAGK--HVEGAICYTGSPVHTLEYYVKLAKELEDMGADSICIK-D 170 (275)
T ss_pred HHHHHHHHHcCCCEEEEeecCChHHHHHHHHHHHHHCCC--eEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEEc-C
Confidence 344566788898877743222211 22233333322221 122222111 123344444444444447888887542 3
Q ss_pred eCCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChh
Q 009282 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGD 239 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~ 239 (538)
.. -..+++.+..++...++ .+.++..|+++..
T Consensus 171 T~--G~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~ 203 (275)
T cd07937 171 MA--GLLTPYAAYELVKALKKEVGLPIHLHTHDTS 203 (275)
T ss_pred CC--CCCCHHHHHHHHHHHHHhCCCeEEEEecCCC
Confidence 22 23568888888877664 4688999986653
No 270
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=28.14 E-value=4.6e+02 Score=23.84 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCc
Q 009282 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN--GDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~ 256 (538)
+++.+. +.|++++-+..-.. ....+.+.++++++.|+ +++++.|-.- -....+.++.+.+.|+...
T Consensus 77 dI~~~~-~~GadG~VfG~L~~-dg~iD~~~~~~Li~~a~--~~~~tFHRAfD~~~d~~~al~~L~~lG~~rV 144 (201)
T PF03932_consen 77 DIRMLR-ELGADGFVFGALTE-DGEIDEEALEELIEAAG--GMPVTFHRAFDEVPDPEEALEQLIELGFDRV 144 (201)
T ss_dssp HHHHHH-HTT-SEEEE--BET-TSSB-HHHHHHHHHHHT--TSEEEE-GGGGGSSTHHHHHHHHHHHT-SEE
T ss_pred HHHHHH-HcCCCeeEEEeECC-CCCcCHHHHHHHHHhcC--CCeEEEeCcHHHhCCHHHHHHHHHhcCCCEE
Confidence 333433 78998886543222 23468999999999987 9999999722 2235566777777787644
No 271
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=28.01 E-value=5.7e+02 Score=24.83 Aligned_cols=104 Identities=11% Similarity=0.017 Sum_probs=60.7
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCC-HHHHHHHH-HHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN-DELLIEGF-KRCKSL--GALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~-~~~l~~~~-~~A~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
.+-+....+-+.+++.+...+--. ......... .+.+..++ ..|+++ +.||.+|.... .. +.+..+.+.|++.
T Consensus 26 ~n~e~~~avi~aAe~~~sPvIlq~-s~~~~~~~~~~~~~~~~~~~~a~~~~~~vPV~lHLDH~-~~-~~i~~ai~~GftS 102 (293)
T PRK07315 26 NNLEWTQAILRAAEAKKAPVLIQT-SMGAAKYMGGYKVCKNLIENLVESMGITVPVAIHLDHG-HY-EDALECIEVGYTS 102 (293)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEc-CccHHhhcCcHHHHHHHHHHHHHHcCCCCcEEEECCCC-CH-HHHHHHHHcCCCE
Confidence 344555555555545555544221 111111112 34455544 456667 67999999766 33 4566667788876
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
........|.....+...++.++++..+..+
T Consensus 103 Vm~d~S~l~~eEni~~t~~v~~~a~~~gv~v 133 (293)
T PRK07315 103 IMFDGSHLPVEENLKLAKEVVEKAHAKGISV 133 (293)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 6555555566666677788888888777655
No 272
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=27.97 E-value=5.6e+02 Score=24.75 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCcEEEEEee-----eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~ 254 (538)
.++..+..++.|++.+.+... |.+.+.++.+.++++-+ ..+.|++.|-...-. .+.++.+.+.|+.
T Consensus 157 pe~a~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~i~~---~~~vPLVlHGgSG~~-~e~~~~ai~~Gi~ 227 (284)
T PRK12857 157 PEEARRFVEETGVDALAIAIGTAHGPYKGEPKLDFDRLAKIKE---LVNIPIVLHGSSGVP-DEAIRKAISLGVR 227 (284)
T ss_pred HHHHHHHHHHHCCCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCEEEeCCCCCC-HHHHHHHHHcCCe
Confidence 456666666779998876554 23345567787777754 347999999855432 2334455556653
No 273
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=27.62 E-value=5.6e+02 Score=24.60 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=62.6
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|.+++-+.-.......++.++-.++++.+.+ .+.++.+++. ...+.-+..+.+.+.|..+..-..+......+
T Consensus 33 ~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~st~~~i~~a~~a~~~Gad~v~v~~P~~~~~s~ 112 (289)
T PF00701_consen 33 EAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGVGANSTEEAIELARHAQDAGADAVLVIPPYYFKPSQ 112 (289)
T ss_dssp HTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEEESSSHHHHHHHHHHHHHTT-SEEEEEESTSSSCCH
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecCcchhHHHHHHHHHHHhhcCceEEEEeccccccchh
Confidence 678887755433333456677777777666543 3567888873 34445555666777777654322111111223
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccC----HHHHHHHHHHHHc
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARKA 306 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~----~~~~~~i~~~~~~ 306 (538)
.+-++....++...+.++.+.+... .-..+.+.++.+.
T Consensus 113 ~~l~~y~~~ia~~~~~pi~iYn~P~~tg~~ls~~~l~~L~~~ 154 (289)
T PF00701_consen 113 EELIDYFRAIADATDLPIIIYNNPARTGNDLSPETLARLAKI 154 (289)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEBHHHHSSTSHHHHHHHHHTS
T ss_pred hHHHHHHHHHHhhcCCCEEEEECCCccccCCCHHHHHHHhcC
Confidence 3344555556677788888877631 1123677777663
No 274
>PRK09248 putative hydrolase; Validated
Probab=27.33 E-value=5.1e+02 Score=24.13 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=25.5
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEec
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHID 144 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d 144 (538)
++|.|+|...+..+ ...+....+.+.+.|++++.-
T Consensus 4 ~~D~H~HT~~s~~~---~~~~~e~v~~A~~~G~~~i~i 38 (246)
T PRK09248 4 PVDTHTHTIASGHA---YSTLHENAAEAKQKGLKLFAI 38 (246)
T ss_pred ceEeCcCCCCCCCC---CCCHHHHHHHHHHCCCCEEEE
Confidence 68999998776222 233555588999999998873
No 275
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=27.29 E-value=5.9e+02 Score=24.76 Aligned_cols=111 Identities=7% Similarity=-0.059 Sum_probs=57.4
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
..|++++-+.-.......++.++-.++++.+.+ -..++.+++.. ..+.-+..+.+.+.|.....-..+.-....+.
T Consensus 39 ~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~~Gadav~~~pP~y~~~~~~ 118 (303)
T PRK03620 39 PYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAERAGADGILLLPPYLTEAPQE 118 (303)
T ss_pred HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 567777754333333455677777777765543 24677777742 22233344455666765432211111111222
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccCHH-HHHHHHHHH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKAR 304 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~~~~~-~~~~i~~~~ 304 (538)
.-......++...+.++.+.+..... ..+.+.++.
T Consensus 119 ~i~~~f~~va~~~~lpi~lYn~~g~~l~~~~l~~L~ 154 (303)
T PRK03620 119 GLAAHVEAVCKSTDLGVIVYNRDNAVLTADTLARLA 154 (303)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 33334444566667888887754211 236676676
No 276
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=27.17 E-value=5.5e+02 Score=24.40 Aligned_cols=159 Identities=12% Similarity=0.061 Sum_probs=81.9
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHH-Hhccc--ceeee--eeeeeecCChhhHHHHHHHHHHcC
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK-KAKNS--CMDYG--FHMAITKWDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g 196 (538)
.+.+++......++.+|+.+++-... .++...+ ..... .+.+. ..............++++.. +.|
T Consensus 36 ~~~~d~~~~~~~a~~~~~~av~v~~~--------~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ve~A~-~~G 106 (267)
T PRK07226 36 DGLVDIRDTVNKVAEGGADAVLMHKG--------LARHGHRGYGRDVGLIVHLSASTSLSPDPNDKVLVGTVEEAI-KLG 106 (267)
T ss_pred cCcCCHHHHHHHHHhcCCCEEEeCHh--------HHhhhccccCCCCcEEEEEcCCCCCCCCCCcceeeecHHHHH-HcC
Confidence 35667777788999999998884421 1111111 11111 11111 11100011133345566666 789
Q ss_pred CcEEEEEeeeCCC-ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 197 INSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 197 ~~~ik~~~~~~~~-~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
++.+++....... .....+++.++.+.++++|+++.++.... |...... ...+.+..+
T Consensus 107 ad~v~~~~~~g~~~~~~~~~~~~~v~~~~~~~g~pl~vi~~~~-------------g~~~e~~--------~~~~~i~~a 165 (267)
T PRK07226 107 ADAVSVHVNVGSETEAEMLEDLGEVAEECEEWGMPLLAMMYPR-------------GPGIKNE--------YDPEVVAHA 165 (267)
T ss_pred CCEEEEEEecCChhHHHHHHHHHHHHHHHHHcCCcEEEEEecC-------------CCccCCC--------ccHHHHHHH
Confidence 9998876543221 12235667788889999999998874210 1000000 012445666
Q ss_pred HHHHHHcCCCEEEEeccCHHHHHHHHHHHH-cCCcEEE
Q 009282 276 IRLAEFVNTPLYVVHVMSMDAMEEIAKARK-AGQRVIG 312 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~-~g~~v~~ 312 (538)
.+.+.+.|..++-+.... ..+.++...+ ..++|.+
T Consensus 166 ~~~a~e~GAD~vKt~~~~--~~~~l~~~~~~~~ipV~a 201 (267)
T PRK07226 166 ARVAAELGADIVKTNYTG--DPESFREVVEGCPVPVVI 201 (267)
T ss_pred HHHHHHHCCCEEeeCCCC--CHHHHHHHHHhCCCCEEE
Confidence 677777888776554321 2255555543 3455543
No 277
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=26.97 E-value=4.3e+02 Score=24.20 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=57.4
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (538)
.+.+......++.+..|++++--.... ....+.++...+..++..+.-| +-.+. +.+++.. ..|+.++-
T Consensus 22 ~~~e~a~~~a~Ali~gGi~~IEITl~s--p~a~e~I~~l~~~~p~~lIGAG-----TVL~~---~q~~~a~-~aGa~fiV 90 (211)
T COG0800 22 DDVEEALPLAKALIEGGIPAIEITLRT--PAALEAIRALAKEFPEALIGAG-----TVLNP---EQARQAI-AAGAQFIV 90 (211)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCC--CCHHHHHHHHHHhCcccEEccc-----cccCH---HHHHHHH-HcCCCEEE
Confidence 355666667788899999988744322 2356667766666553333322 22222 2333444 66777661
Q ss_pred EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009282 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (538)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~ 241 (538)
++..-.++++.|.++++++.--+.+..++
T Consensus 91 -----------sP~~~~ev~~~a~~~~ip~~PG~~TptEi 119 (211)
T COG0800 91 -----------SPGLNPEVAKAANRYGIPYIPGVATPTEI 119 (211)
T ss_pred -----------CCCCCHHHHHHHHhCCCcccCCCCCHHHH
Confidence 33333456678888888888666666543
No 278
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=26.82 E-value=5.8e+02 Score=24.57 Aligned_cols=109 Identities=14% Similarity=0.002 Sum_probs=61.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+......++..||..++-.+..+.. ... +.++...+.. .+.++-.+ ......+..+..+..
T Consensus 16 g~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~g----v~~~t~~~i~~a~~a- 90 (289)
T cd00951 16 GSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAG----AGYGTATAIAYAQAA- 90 (289)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEe----cCCCHHHHHHHHHHH-
Confidence 45567777777888899999999866543332 222 2223323322 22222222 222234444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
++.|++.+-+..-+ ....+.+.+.+.++. +...++++.+.-
T Consensus 91 ~~~Gad~v~~~pP~--y~~~~~~~i~~~f~~v~~~~~~pi~lYn 132 (289)
T cd00951 91 EKAGADGILLLPPY--LTEAPQEGLYAHVEAVCKSTDLGVIVYN 132 (289)
T ss_pred HHhCCCEEEECCCC--CCCCCHHHHHHHHHHHHhcCCCCEEEEe
Confidence 47899998664332 223467777776644 456788888874
No 279
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=26.77 E-value=2.1e+02 Score=23.95 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=32.5
Q ss_pred HHHHHcCCcEEEEEeeeC------------CCccCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 190 VMVKEKGINSFKFFMAYK------------GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~------------~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
+..++.+++.+-++...+ -.+.+..+.|.+++++|++.|+.+.+...
T Consensus 7 ~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~ay~~ 65 (132)
T PF14871_consen 7 DTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPAYFD 65 (132)
T ss_pred HHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEEEEe
Confidence 333366777666554311 12344579999999999999999998873
No 280
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=26.49 E-value=3.5e+02 Score=25.38 Aligned_cols=70 Identities=17% Similarity=0.145 Sum_probs=36.6
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe
Q 009282 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h 290 (538)
.++.+...++.+.|++.|+.+..-+.+...++. +...++....-.+ . + ..-..+++.....|.++++.-
T Consensus 52 el~~e~~~~L~~~~~~~gi~f~stpfd~~s~d~----l~~~~~~~~KIaS---~-d---l~n~~lL~~~A~tgkPvIlST 120 (241)
T PF03102_consen 52 ELSEEQHKELFEYCKELGIDFFSTPFDEESVDF----LEELGVPAYKIAS---G-D---LTNLPLLEYIAKTGKPVILST 120 (241)
T ss_dssp SS-HHHHHHHHHHHHHTT-EEEEEE-SHHHHHH----HHHHT-SEEEE-G---G-G---TT-HHHHHHHHTT-S-EEEE-
T ss_pred cCCHHHHHHHHHHHHHcCCEEEECCCCHHHHHH----HHHcCCCEEEecc---c-c---ccCHHHHHHHHHhCCcEEEEC
Confidence 357899999999999999999988877654433 3334443221000 0 0 011234555556788877644
Q ss_pred c
Q 009282 291 V 291 (538)
Q Consensus 291 ~ 291 (538)
.
T Consensus 121 G 121 (241)
T PF03102_consen 121 G 121 (241)
T ss_dssp T
T ss_pred C
Confidence 3
No 281
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=26.42 E-value=4.4e+02 Score=23.78 Aligned_cols=101 Identities=10% Similarity=-0.075 Sum_probs=51.9
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCC---CC---CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHc
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPI---NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (538)
.+.+........+++.|.+-+--..... .. ...+.+....+.....++... ......+.+.....-++..+.
T Consensus 66 ~~~~~k~~eve~A~~~GAdevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~g~~lkvI--~e~~~l~~~~i~~a~ria~e~ 143 (203)
T cd00959 66 TTTEVKVAEAREAIADGADEIDMVINIGALKSGDYEAVYEEIAAVVEACGGAPLKVI--LETGLLTDEEIIKACEIAIEA 143 (203)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcCCCeEEEE--EecCCCCHHHHHHHHHHHHHh
Confidence 4455555667888999988665332222 11 233334444443332222221 122223445555555666688
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~ 225 (538)
|++.+|....+. ....+.+.++.+.+..+
T Consensus 144 GaD~IKTsTG~~-~~~at~~~v~~~~~~~~ 172 (203)
T cd00959 144 GADFIKTSTGFG-PGGATVEDVKLMKEAVG 172 (203)
T ss_pred CCCEEEcCCCCC-CCCCCHHHHHHHHHHhC
Confidence 999999863332 12345565555555544
No 282
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=26.36 E-value=5.2e+02 Score=25.99 Aligned_cols=111 Identities=14% Similarity=0.028 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.+.|+.++..+.+.|+++.+-....+.. ...+.+.+++.+.|.++-+.....
T Consensus 57 ~~~L~~~L~~~~~~gIkvI~NaGg~np~----------------------------~~a~~v~eia~e~Gl~lkvA~V~g 108 (362)
T PF07287_consen 57 VRDLRPLLPAAAEKGIKVITNAGGLNPA----------------------------GCADIVREIARELGLSLKVAVVYG 108 (362)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCHH----------------------------HHHHHHHHHHHhcCCCeeEEEEEC
Confidence 4578889999999999998876432211 123344555667776655544443
Q ss_pred HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 294 MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 294 ~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
....+.+..+.+.|..+..-.... .+.+..... - .....-..+.+.++|+.|.-+.|+-
T Consensus 109 Dd~~~~v~~~~~~g~~~~~l~~~~--~l~~~~~~~---~---------~a~aylGa~pI~~AL~~GADIVI~G 167 (362)
T PF07287_consen 109 DDLKDEVKELLAEGETIRPLDTGP--PLSEWDDRI---V---------SANAYLGAEPIVEALEAGADIVITG 167 (362)
T ss_pred ccchHhHHHHHhCCCCCccCCCCC--Ccchhcccc---c---------eEEEecChHHHHHHHHcCCCEEEeC
Confidence 333356655555553222111110 011000000 0 0011123477899999999888873
No 283
>PF15581 Imm35: Immunity protein 35
Probab=26.31 E-value=1.8e+02 Score=22.21 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=26.8
Q ss_pred hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 406 ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 406 ~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
+..||+.+|+++..-.-+|+-- -+++..-|.-|++.+|
T Consensus 42 eWRGl~~~qV~~kl~ava~~~~-----~~~~vvKkE~~~Iwfd 79 (93)
T PF15581_consen 42 EWRGLPEEQVLYKLEAVAAKGP-----EAKIVVKKEGNIIWFD 79 (93)
T ss_pred HHcCCCHHHHHHHHHHHHhcCC-----CcceEEEecCCeEEEc
Confidence 4567999999998766665432 3556666677777776
No 284
>PLN02858 fructose-bisphosphate aldolase
Probab=26.15 E-value=6.8e+02 Score=30.42 Aligned_cols=106 Identities=9% Similarity=-0.071 Sum_probs=68.3
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
.+-+....+-+.+++.+...|--+ .+........+...-+...|+++..+|.+|....... +.+..+.+.|.++....
T Consensus 1122 ~n~e~~~avi~aAe~~~sPvIl~~-~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHLDHg~~~-~~i~~ai~~Gf~SVM~D 1199 (1378)
T PLN02858 1122 YNLEGIEAVVAAAEAEKSPAILQV-HPGALKQGGIPLVSCCIAAAEQASVPITVHFDHGTSK-HELLEALELGFDSVMVD 1199 (1378)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-CccHHhhcCHHHHHHHHHHHHHCCCCEEEECCCCCCH-HHHHHHHHhCCCEEEEe
Confidence 455566666666655565554321 1111111234444445677889999999999665544 44556667798876655
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
....|.+...+...+..++++..|..+-
T Consensus 1200 gS~l~~eeNi~~t~~vv~~Ah~~gv~VE 1227 (1378)
T PLN02858 1200 GSHLSFTENISYTKSISSLAHSKGLMVE 1227 (1378)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 5566777777888899999998887664
No 285
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed
Probab=25.97 E-value=7.6e+02 Score=25.86 Aligned_cols=112 Identities=14% Similarity=0.010 Sum_probs=64.9
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcc----cceeeeeeeeeecC-ChhhHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (538)
.+++.+.......+..|+--+-|-..-.++ ...+.+.+..+...+ .--...+...++.. .++..+..+...
T Consensus 173 Lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~f~p~~~Rv~~~~~a~~~a~~eTG~~k~y~~NiT~~~~~em~~ra~~~~- 251 (468)
T PRK04208 173 LSAKNYGRVVYEALRGGLDFTKDDENLNSQPFNRWRDRFLFVMEAIDKAEAETGERKGHYLNVTAPTMEEMYKRAEFAK- 251 (468)
T ss_pred CCHHHHHHHHHHHHhcCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEEecCCCCHHHHHHHHHHHH-
Confidence 578888888888999999988865433322 344444443333221 11111222333433 344445555544
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~ 239 (538)
+.|...+-+-.. ..-...++.+.+.++..+++++.|-....
T Consensus 252 e~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~IhaHrA~~g 292 (468)
T PRK04208 252 ELGSPIVMIDVV-----TAGWTALQSLREWCRDNGLALHAHRAMHA 292 (468)
T ss_pred HhCCCEEEEecc-----ccccHHHHHHHHhhhcCCcEEEecCCccc
Confidence 678877654322 22345577777777788999999986543
No 286
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=25.62 E-value=6.1e+02 Score=24.39 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=57.5
Q ss_pred Hc-CCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchH
Q 009282 194 EK-GINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLL 267 (538)
Q Consensus 194 ~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 267 (538)
.. |++++-+.-.....+.++.++-+++++.+.+ ..+++.+++.. ..+..+..+.+.+.|..+..-..+.-....
T Consensus 32 ~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~viagv~~~~~~~ai~~a~~a~~~Gad~v~~~~P~y~~~~ 111 (288)
T cd00954 32 EKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSLNLKESQELAKHAEELGYDAISAITPFYYKFS 111 (288)
T ss_pred hcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEeccCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCC
Confidence 55 7777654433333455677777766665443 24677777732 334445555666777654321111111111
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEeccCHH----HHHHHHHHHH
Q 009282 268 EGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 268 ~~~~i~~~l~~~~~~-~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
+.+-++....++... +.++.+.+..... ..+.+.++.+
T Consensus 112 ~~~i~~~~~~v~~a~~~lpi~iYn~P~~tg~~l~~~~~~~L~~ 154 (288)
T cd00954 112 FEEIKDYYREIIAAAASLPMIIYHIPALTGVNLTLEQFLELFE 154 (288)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 223334444455666 6788777654311 2366666664
No 287
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=25.38 E-value=6.2e+02 Score=24.45 Aligned_cols=112 Identities=13% Similarity=-0.002 Sum_probs=58.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHH---hcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCK---SLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~---~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
..|++++-+.-.......++.++-.++++.+. +.+.++.+|+.. ..+.-+..+.+.+.|.....-..+.-....+
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~gv~~~~t~~ai~~a~~A~~~Gad~v~v~pP~y~~~~~ 111 (294)
T TIGR02313 32 EGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAPGTGALNHDETLELTKFAEEAGADAAMVIVPYYNKPNQ 111 (294)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEEECCcchHHHHHHHHHHHHHcCCCEEEEcCccCCCCCH
Confidence 56777764433323345567777666665443 235678888743 2333344455666776543221111111122
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEeccCHH----HHHHHHHHHH
Q 009282 269 GEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 269 ~~~i~~~l~~~~~~-~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
..-++....++... +.++.+.+..... ..+.+.++.+
T Consensus 112 ~~l~~~f~~ia~a~~~lpv~iYn~P~~tg~~l~~~~l~~L~~ 153 (294)
T TIGR02313 112 EALYDHFAEVADAVPDFPIIIYNIPGRAAQEIAPKTMARLRK 153 (294)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeCchhcCcCCCHHHHHHHHh
Confidence 23344444556666 7888887754321 1367777764
No 288
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=25.21 E-value=7.1e+02 Score=25.00 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=32.5
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCE--EEEecc-CHHHHHHH-HHHHHcCCcEEEeccccccc
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVM-SMDAMEEI-AKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~h~~-~~~~~~~i-~~~~~~g~~v~~~~~~~~~~ 320 (538)
.+...++...+...+.+....+...+.+. ...|.. .....+.+ +.+++.|+.++ ..+++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~~~~~G~~~~-~~~~~~~~ 225 (387)
T cd01308 160 DHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGKRALSPIFELIEETEIPIT-QFLPTHIN 225 (387)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchHHHHHHHHHHHhcCCCcc-eeECCccc
Confidence 33344566666565665555554444443 344454 23444555 43454588776 55555553
No 289
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=25.15 E-value=4.9e+02 Score=23.96 Aligned_cols=73 Identities=26% Similarity=0.293 Sum_probs=50.2
Q ss_pred HHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchH
Q 009282 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLL 267 (538)
Q Consensus 188 ~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 267 (538)
.-.+.+..|.+.+|+|.-. | ....++++.+.++|.++|+.+ .++. |+
T Consensus 140 Aiaml~dmG~~SiKffPM~-G--l~~leE~~avA~aca~~g~~l---EPTG-------------GI-------------- 186 (236)
T TIGR03581 140 AIAMLKDMGGSSVKFFPMG-G--LKHLEEYAAVAKACAKHGFYL---EPTG-------------GI-------------- 186 (236)
T ss_pred HHHHHHHcCCCeeeEeecC-C--cccHHHHHHHHHHHHHcCCcc---CCCC-------------Cc--------------
Confidence 3344558899999998532 1 236899999999999999864 2221 11
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 268 EGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 268 ~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
..+.+.++++.+...|.+-++.|..+
T Consensus 187 dl~Nf~~I~~i~ldaGv~kviPHIYs 212 (236)
T TIGR03581 187 DLDNFEEIVQIALDAGVEKVIPHVYS 212 (236)
T ss_pred cHHhHHHHHHHHHHcCCCeeccccce
Confidence 13556777777888888888888754
No 290
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=25.08 E-value=5.5e+02 Score=25.26 Aligned_cols=75 Identities=20% Similarity=0.135 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHHH-hcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 212 INDELLIEGFKRCK-SLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 212 ~~~~~l~~~~~~A~-~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
.-.+....+++..+ +.|..+++|..+ .....+.++.+.+.|+...+.|.. +|..-..+...+.+..+...+..+-
T Consensus 91 ~~ieR~~~~ir~LK~efG~~fHiHLYT~g~~~~~e~l~~L~eAGLDEIRfHp~-~~~~~~~e~~i~~l~~A~~~g~dvG 168 (353)
T COG2108 91 LEIERTVEYIRLLKDEFGEDFHIHLYTTGILATEEALKALAEAGLDEIRFHPP-RPGSKSSEKYIENLKIAKKYGMDVG 168 (353)
T ss_pred HHHHHHHHHHHHHHHhhccceeEEEeeccccCCHHHHHHHHhCCCCeEEecCC-CccccccHHHHHHHHHHHHhCccce
Confidence 33444445555544 457888889855 444567888899999999999986 5655555666777777777765553
No 291
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=25.01 E-value=7e+02 Score=24.93 Aligned_cols=44 Identities=16% Similarity=0.350 Sum_probs=27.6
Q ss_pred ccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 384 RKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 384 ~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
...|.|+-. .+..+.++.++.+.+ ++-+|.+..+--|==+.+..
T Consensus 347 ~~~PkGLED-VSkYP~LiaeLl~r~-~~~~E~~~l~g~N~LRV~~~ 390 (419)
T KOG4127|consen 347 PRVPKGLED-VSKYPDLIAELLERG-WWEEELIGLAGGNLLRVFRQ 390 (419)
T ss_pred CCCCcchhh-hhhhHHHHHHHHhcC-CcHHHHHHHhcchHHHHHHH
Confidence 344555333 234566666666665 88888888777776666654
No 292
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=25.00 E-value=6.4e+02 Score=24.47 Aligned_cols=109 Identities=12% Similarity=-0.047 Sum_probs=61.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+....+.++.+||..++-.+..+.. ... +.++...+.. .+..+-.+. .....+..+..+...
T Consensus 23 g~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv----~~~t~~~i~~~~~a~ 98 (303)
T PRK03620 23 GSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGA----GGGTAQAIEYAQAAE 98 (303)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEec----CCCHHHHHHHHHHHH
Confidence 45667777777888899999999866543332 222 2223222222 222222222 223344555554444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++.+-+..-+ ....+.+.+.+.++. +...++++.+.-
T Consensus 99 -~~Gadav~~~pP~--y~~~~~~~i~~~f~~va~~~~lpi~lYn 139 (303)
T PRK03620 99 -RAGADGILLLPPY--LTEAPQEGLAAHVEAVCKSTDLGVIVYN 139 (303)
T ss_pred -HhCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 7899998664332 223467777776654 566688888764
No 293
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=24.80 E-value=57 Score=24.75 Aligned_cols=14 Identities=14% Similarity=0.290 Sum_probs=8.2
Q ss_pred ccCCCccEEEEcCC
Q 009282 437 LVGSDADIIIFNPN 450 (538)
Q Consensus 437 ~~Gk~ADlvvld~~ 450 (538)
.-|..+||+|.|.+
T Consensus 21 ~sgq~~D~~v~d~~ 34 (82)
T PF12690_consen 21 PSGQRYDFVVKDKE 34 (82)
T ss_dssp SSS--EEEEEE-TT
T ss_pred CCCCEEEEEEECCC
Confidence 46889999999643
No 294
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=24.54 E-value=6.4e+02 Score=24.29 Aligned_cols=111 Identities=13% Similarity=0.108 Sum_probs=56.1
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
.|++++-+.-.......++.++-.++++.+.+ ..+++.+++. +..+..+..+.+.+.|........+.-....+.
T Consensus 37 ~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~viagvg~~~t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~~ 116 (293)
T PRK04147 37 QGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQVGSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFE 116 (293)
T ss_pred CCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEecCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCCHH
Confidence 67777644332222355676666666654432 2467777773 234444455566666765432211111111122
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
.-++....++...+.++.+.+..... ..+.+.++.+
T Consensus 117 ~l~~~f~~va~a~~lPv~iYn~P~~tg~~l~~~~l~~L~~ 156 (293)
T PRK04147 117 EICDYYREIIDSADNPMIVYNIPALTGVNLSLDQFNELFT 156 (293)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCchhhccCCCHHHHHHHhc
Confidence 33334444566667888887654321 2366666664
No 295
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=24.45 E-value=4.9e+02 Score=22.86 Aligned_cols=105 Identities=13% Similarity=-0.016 Sum_probs=55.1
Q ss_pred ChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc--ccceeeeeeeeee-cCChhhHHHHHHHHHHcCCcE
Q 009282 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 199 (538)
+.+.+....+.++++|+..+.-.+ ..++...+... +..+..+...... ....+..+..+... +.|++.
T Consensus 11 d~~~~~~~~~~~~~~gv~gi~~~g--------~~i~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~a~~a~-~~Gad~ 81 (201)
T cd00945 11 TLEDIAKLCDEAIEYGFAAVCVNP--------GYVRLAADALAGSDVPVIVVVGFPTGLTTTEVKVAEVEEAI-DLGADE 81 (201)
T ss_pred CHHHHHHHHHHHHHhCCcEEEECH--------HHHHHHHHHhCCCCCeEEEEecCCCCCCcHHHHHHHHHHHH-HcCCCE
Confidence 556677778888999998877543 34444433332 2222222111100 01344555555555 789999
Q ss_pred EEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC
Q 009282 200 FKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE 236 (538)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~ 236 (538)
+.+...+...+..+.+.+.+.++...+ .++++.+...
T Consensus 82 i~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~pv~iy~~ 121 (201)
T cd00945 82 IDVVINIGSLKEGDWEEVLEEIAAVVEAADGGLPLKVILE 121 (201)
T ss_pred EEEeccHHHHhCCCHHHHHHHHHHHHHHhcCCceEEEEEE
Confidence 987543321111114555554443333 4889888763
No 296
>PRK08444 hypothetical protein; Provisional
Probab=24.43 E-value=7.2e+02 Score=24.86 Aligned_cols=131 Identities=14% Similarity=0.014 Sum_probs=0.0
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeee-eeeec------CChhhHHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH-MAITK------WDEVVSDEMEVMVKE 194 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~ 194 (538)
.+.+.+...++.+...|+|.+.-.++.......+.+....+......-..... ..... ..+-..++.....++
T Consensus 80 ls~eeI~~~a~~a~~~G~~ei~iv~G~~p~~~~e~y~e~ir~Ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~Lke 159 (353)
T PRK08444 80 MSHEEILEIVKNSVKRGIKEVHIVSAHNPNYGYEWYLEIFKKIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLE 159 (353)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCHHHHHHHHHHHHHHCCCceEeeCCHHHHHHHHHHcCCCHHHHHHHHHH
Q ss_pred cCCcEEEE-EeeeC--------CCccCCHHHHHHHHHHHHhcCC-----eEEEEcCChhhHHHHHHHHHHcC
Q 009282 195 KGINSFKF-FMAYK--------GSFMINDELLIEGFKRCKSLGA-----LAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 195 ~g~~~ik~-~~~~~--------~~~~~~~~~l~~~~~~A~~~g~-----~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
.|.+.+-. ....- .....+.+....+.+.|++.|+ .+.+|.++.....+.+..+.+..
T Consensus 160 AGl~~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~sg~l~G~gEt~edrv~hl~~Lr~Lq 231 (353)
T PRK08444 160 YGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSNATMLFGHIENREHRIDHMLRLRDLQ 231 (353)
T ss_pred hCcccCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEecCCCHHHHHHHHHHHHHhc
No 297
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=23.97 E-value=6.6e+02 Score=24.25 Aligned_cols=109 Identities=13% Similarity=0.004 Sum_probs=60.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+......++..||..++-.+..+.. ... +.++...+.. .+..+-.+. .....+.++..+..
T Consensus 21 g~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv----~~~t~~ai~~a~~a- 95 (296)
T TIGR03249 21 GSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGV----GGNTSDAIEIARLA- 95 (296)
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEec----CccHHHHHHHHHHH-
Confidence 55677778888888899999998865443322 222 2222222222 222222222 12234445444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
.+.|++.+-+..-+ ....+.+.+.+.++. +...++++...-
T Consensus 96 ~~~Gadav~~~pP~--y~~~s~~~i~~~f~~v~~a~~~pvilYn 137 (296)
T TIGR03249 96 EKAGADGYLLLPPY--LINGEQEGLYAHVEAVCESTDLGVIVYQ 137 (296)
T ss_pred HHhCCCEEEECCCC--CCCCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 37899988654322 233466777766654 455678877764
No 298
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=23.85 E-value=8.3e+02 Score=25.36 Aligned_cols=95 Identities=7% Similarity=0.041 Sum_probs=51.4
Q ss_pred HHHHHHhCCcEEEe-cccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCC
Q 009282 130 GQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (538)
Q Consensus 130 ~~~~~l~~GvTt~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (538)
.+..++.+|+.-+. |..........+.++...+..+...+..+. -...+....+. +.|++.+++...+.+
T Consensus 228 r~~~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~--------v~t~~~a~~l~-~aGad~i~vg~g~G~ 298 (450)
T TIGR01302 228 RAEALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGN--------VATAEQAKALI-DAGADGLRVGIGPGS 298 (450)
T ss_pred HHHHHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEe--------CCCHHHHHHHH-HhCCCEEEECCCCCc
Confidence 35567888988765 443322223445555554433332222211 11234555566 789999987543321
Q ss_pred C---------ccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 209 S---------FMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 209 ~---------~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
. .......+.++.+.+++.+.++..
T Consensus 299 ~~~t~~~~~~g~p~~~~i~~~~~~~~~~~vpvia 332 (450)
T TIGR01302 299 ICTTRIVAGVGVPQITAVYDVAEYAAQSGIPVIA 332 (450)
T ss_pred CCccceecCCCccHHHHHHHHHHHHhhcCCeEEE
Confidence 1 111235566677778888988876
No 299
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III. Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis.
Probab=23.84 E-value=8e+02 Score=25.17 Aligned_cols=112 Identities=12% Similarity=-0.009 Sum_probs=63.8
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcc----cceeeeeeeeeecCChhhHHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (538)
.+++.+..........|+--+-|-..-.++ ...+.+.+..+...+ .--...+...++...++..+..+... +
T Consensus 157 lsp~~~a~~~~~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~ya~NiT~~~~em~~ra~~~~-~ 235 (412)
T TIGR03326 157 LSTEEHAKVAYELWSGGVDLLKDDENLTSQPFNRFEERVEKLYKVRDKVEAETGERKEYLANITAPVREMERRAELVA-D 235 (412)
T ss_pred CChHHHHHHHHHHHhcCCceeecCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceEEEEecCCHHHHHHHHHHHH-H
Confidence 577888888888999999988865333222 344444443333321 11112222233433344444444443 6
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~ 239 (538)
.|.+.+-+-.. ..-...++.+.+.+...+++++.|-....
T Consensus 236 ~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~ih~Hra~~g 275 (412)
T TIGR03326 236 LGGQYVMVDVV-----VCGWSALQYIRELTEDLGLAIHAHRAMHA 275 (412)
T ss_pred hCCCeEEEEee-----ccchHHHHHHHHhhccCCeEEEEcCCccc
Confidence 78877655332 22355577777777778999999986553
No 300
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=23.60 E-value=5.9e+02 Score=26.78 Aligned_cols=99 Identities=15% Similarity=0.101 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCcEEEe-cccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 127 FFSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
.......++..|+..+. |..........+.++...+..+...+-.| +-...+..+.+. +.|++.+|+.+.
T Consensus 228 ~~~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~ag--------nv~t~~~a~~l~-~aGad~v~vgig 298 (479)
T PRK07807 228 VAAKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAG--------NVVTAEGTRDLV-EAGADIVKVGVG 298 (479)
T ss_pred HHHHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEee--------ccCCHHHHHHHH-HcCCCEEEECcc
Confidence 33446667789998875 55433333455666666655443222221 111244555666 789999997665
Q ss_pred eCC---------CccCCHHHHHHHHHHHHhcCCeEEEE
Q 009282 206 YKG---------SFMINDELLIEGFKRCKSLGALAMVH 234 (538)
Q Consensus 206 ~~~---------~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (538)
+.. ........+.++.+.|++++.++..-
T Consensus 299 ~gsictt~~~~~~~~p~~~av~~~~~~~~~~~~~via~ 336 (479)
T PRK07807 299 PGAMCTTRMMTGVGRPQFSAVLECAAAARELGAHVWAD 336 (479)
T ss_pred CCcccccccccCCchhHHHHHHHHHHHHHhcCCcEEec
Confidence 421 11223455566666667888887753
No 301
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
Probab=23.45 E-value=5.9e+02 Score=23.44 Aligned_cols=64 Identities=19% Similarity=0.120 Sum_probs=43.9
Q ss_pred HHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 190 ~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
+++.+.|++.+-+.. ..+.+.+.+.++.|+++|..+.+..-+........+.+...|..-...|
T Consensus 74 ~ma~~aGAd~~tV~g------~A~~~TI~~~i~~A~~~~~~v~iDl~~~~~~~~~~~~l~~~gvd~~~~H 137 (217)
T COG0269 74 RMAFEAGADWVTVLG------AADDATIKKAIKVAKEYGKEVQIDLIGVWDPEQRAKWLKELGVDQVILH 137 (217)
T ss_pred HHHHHcCCCEEEEEe------cCCHHHHHHHHHHHHHcCCeEEEEeecCCCHHHHHHHHHHhCCCEEEEE
Confidence 334478999987753 2479999999999999999999888555444444444444555443333
No 302
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=23.34 E-value=6.3e+02 Score=23.77 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=50.2
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
-.+.+|+.. .....++.+.+++.++.++++|+.+..- .... +.. .. ...+.+.
T Consensus 37 yID~~K~g~--Gt~~l~~~~~l~eki~l~~~~gV~v~~G---Gtl~-E~a---~~------------------q~~~~~y 89 (244)
T PF02679_consen 37 YIDFLKFGW--GTSALYPEEILKEKIDLAHSHGVYVYPG---GTLF-EVA---YQ------------------QGKFDEY 89 (244)
T ss_dssp G-SEEEE-T--TGGGGSTCHHHHHHHHHHHCTT-EEEE----HHHH-HHH---HH------------------TT-HHHH
T ss_pred hccEEEecC--ceeeecCHHHHHHHHHHHHHcCCeEeCC---cHHH-HHH---Hh------------------cChHHHH
Confidence 356777632 2234567888999999999999987742 1111 111 00 1335566
Q ss_pred HHHHHHcCCCEEE-Eecc----CHHHHHHHHHHHHcCCcEEEecc
Q 009282 276 IRLAEFVNTPLYV-VHVM----SMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 276 l~~~~~~~~~~~~-~h~~----~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
++.++.+|...+= ...+ .....+.++.+++.|..|..+..
T Consensus 90 l~~~k~lGf~~IEiSdGti~l~~~~r~~~I~~~~~~Gf~v~~EvG 134 (244)
T PF02679_consen 90 LEECKELGFDAIEISDGTIDLPEEERLRLIRKAKEEGFKVLSEVG 134 (244)
T ss_dssp HHHHHHCT-SEEEE--SSS---HHHHHHHHHHHCCTTSEEEEEES
T ss_pred HHHHHHcCCCEEEecCCceeCCHHHHHHHHHHHHHCCCEEeeccc
Confidence 6666777765432 2111 12233667777778888877665
No 303
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=22.73 E-value=4.3e+02 Score=26.17 Aligned_cols=86 Identities=13% Similarity=0.167 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE-e
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV-H 290 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~-h 290 (538)
++.+.++.+.+.+++.|+.+..-+.+...++ .+...|+....-- .... . =..+++.....|.++++. +
T Consensus 73 l~~e~~~~L~~~~~~~Gi~~~stpfd~~svd----~l~~~~v~~~KIa---S~~~---~-n~pLL~~~A~~gkPvilStG 141 (329)
T TIGR03569 73 LSEEDHRELKEYCESKGIEFLSTPFDLESAD----FLEDLGVPRFKIP---SGEI---T-NAPLLKKIARFGKPVILSTG 141 (329)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeCCHHHHH----HHHhcCCCEEEEC---cccc---c-CHHHHHHHHhcCCcEEEECC
Confidence 5788999999999999999998887765443 3334444322100 0000 0 123445555668888764 4
Q ss_pred ccCHHHH-HHHHHHHHcCC
Q 009282 291 VMSMDAM-EEIAKARKAGQ 308 (538)
Q Consensus 291 ~~~~~~~-~~i~~~~~~g~ 308 (538)
.++..++ ..++.+++.|.
T Consensus 142 matl~Ei~~Av~~i~~~G~ 160 (329)
T TIGR03569 142 MATLEEIEAAVGVLRDAGT 160 (329)
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 4433322 23334455554
No 304
>cd00453 FTBP_aldolase_II Fructose/tagarose-bisphosphate aldolase class II. This family includes fructose-1,6-bisphosphate (FBP) and tagarose 1,6-bisphosphate (TBP) aldolases. FBP-aldolase is homodimeric and used in gluconeogenesis and glycolysis; the enzyme controls the condensation of dihydroxyacetone phosphate with glyceraldehyde-3-phosphate to yield fructose-1,6-bisphosphate. TBP-aldolase is tetrameric and produces tagarose-1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. Although structurally similar, the class I aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=22.72 E-value=7.6e+02 Score=24.51 Aligned_cols=73 Identities=7% Similarity=0.017 Sum_probs=50.2
Q ss_pred HHHHHHH-HHHHHhcCCeEEEEcCChh--hHHHHHHHHHHcC-----------CCCcccccccCCchHHHHHHHHHHHHH
Q 009282 214 DELLIEG-FKRCKSLGALAMVHAENGD--AVFEGQKRMIELG-----------ITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 214 ~~~l~~~-~~~A~~~g~~v~~H~~~~~--~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
.+.+..+ ...|++++++|..|..... .. +.+..+++.| ..+........|.....+...+.++.+
T Consensus 70 ~~~~~~~~~~~A~~~~VPV~lHLDH~~~~~~-e~i~~ai~~G~~~~~~~~~~~FsSVMiDgS~l~~eeNi~~T~~vve~A 148 (340)
T cd00453 70 AISGAHHVHQMAEHYGVPVILHTDHCAKKLL-PWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERM 148 (340)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCCCCCCCH-HHHHHHHHcCCccccccCCCCceeEEecCCCCCHHHHHHHHHHHHHHH
Confidence 3444444 4567889999999996654 33 5667777888 555544445566666777778888888
Q ss_pred HHcCCCEE
Q 009282 280 EFVNTPLY 287 (538)
Q Consensus 280 ~~~~~~~~ 287 (538)
+..|..+-
T Consensus 149 h~~gi~VE 156 (340)
T cd00453 149 SKIGMTLE 156 (340)
T ss_pred HHcCCEEE
Confidence 88776653
No 305
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=22.51 E-value=6.4e+02 Score=27.53 Aligned_cols=178 Identities=20% Similarity=0.143 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhcCCeE-EEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 214 DELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v-~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
-|.--++++.|+++++.. .+..+.+.....-.+.-.++-+ + ..-|+...+..+.++++.+.+.+...+-....
T Consensus 42 gEIaIRvFRa~tEL~~~tvAiYseqD~~sMHRqKADEaY~i----G--k~l~PV~AYL~ideii~iak~~~vdavHPGYG 115 (1176)
T KOG0369|consen 42 GEIAIRVFRAATELSMRTVAIYSEQDRLSMHRQKADEAYLI----G--KGLPPVGAYLAIDEIISIAKKHNVDAVHPGYG 115 (1176)
T ss_pred CcchhHHHHHHhhhcceEEEEEeccchhhhhhhccccceec----c--cCCCchhhhhhHHHHHHHHHHcCCCeecCCcc
Confidence 344567888889888854 4444443321111111111100 0 11455666788999999999988765432222
Q ss_pred CHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 293 SMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 293 ~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
..+ ..+..+...+.|+..+ .|.+.- +. +..+...+-..+.++|+++.-|||++..
T Consensus 116 FLSErsdFA~av~~AGi~fi-GPspeV-------i~----------------~mGDKv~AR~~Ai~agVpvVPGTpgPit 171 (1176)
T KOG0369|consen 116 FLSERSDFAQAVQDAGIRFI-GPSPEV-------ID----------------SMGDKVAARAIAIEAGVPVVPGTPGPIT 171 (1176)
T ss_pred ccccchHHHHHHHhcCceEe-CCCHHH-------HH----------------HhhhHHHHHHHHHHcCCCccCCCCCCcc
Confidence 211 1255566667776432 232210 00 0011122233578899999999997655
Q ss_pred Chhhhh-cC---ccC-cccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 372 NSTQKA-FG---IDD-FRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 372 ~~~~~~-~~---~~~-~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
...+.. +. +-| ...+.+|-.|..++ .++.+ -+.+|+++.+++.+-.+||-
T Consensus 172 t~~EA~eF~k~yG~PvI~KAAyGGGGRGmR-------vVr~~-e~vee~f~Ra~SEA~aaFGn 226 (1176)
T KOG0369|consen 172 TVEEALEFVKEYGLPVIIKAAYGGGGRGMR-------VVRSG-EDVEEAFQRAYSEALAAFGN 226 (1176)
T ss_pred cHHHHHHHHHhcCCcEEEeecccCCCcceE-------Eeech-hhHHHHHHHHHHHHHHhcCC
Confidence 443321 00 000 11112222221211 12233 57899999999999999986
No 306
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=22.50 E-value=97 Score=22.05 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=21.9
Q ss_pred cccccccccc-CCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 109 DPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 109 D~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
|.|+|...+. .+..++++ ..+.+.+.|+..+.
T Consensus 1 dlH~Ht~~S~~~~~~~~~~---~~~~a~~~g~~~v~ 33 (67)
T smart00481 1 DLHVHSDYSLLDGALSPEE---LVKRAKELGLKAIA 33 (67)
T ss_pred CCccccCCccccccCCHHH---HHHHHHHcCCCEEE
Confidence 6788887663 33444444 47888888988776
No 307
>COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
Probab=22.41 E-value=6e+02 Score=23.22 Aligned_cols=89 Identities=15% Similarity=0.107 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCc
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (538)
++..... +.|++.+.+..........+.+..+++...+.. -..+.+-....
T Consensus 13 eda~~a~-~~gad~iG~If~~~SpR~Vs~~~a~~i~~~v~~-~~~VgVf~n~~--------------------------- 63 (208)
T COG0135 13 EDAKAAA-KAGADYIGFIFVPKSPRYVSPEQAREIASAVPK-VKVVGVFVNES--------------------------- 63 (208)
T ss_pred HHHHHHH-HcCCCEEEEEEcCCCCCcCCHHHHHHHHHhCCC-CCEEEEECCCC---------------------------
Confidence 3444444 789999998887777788899999999988876 22333333222
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcC-CcEE
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAG-QRVI 311 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g-~~v~ 311 (538)
++++.++....+...+-.|..... +.++.+++.. ++|+
T Consensus 64 ------~~~i~~i~~~~~ld~VQlHG~e~~--~~~~~l~~~~~~~v~ 102 (208)
T COG0135 64 ------IEEILEIAEELGLDAVQLHGDEDP--EYIDQLKEELGVPVI 102 (208)
T ss_pred ------HHHHHHHHHhcCCCEEEECCCCCH--HHHHHHHhhcCCceE
Confidence 222233344455566667776543 6777777654 4444
No 308
>cd01721 Sm_D3 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D3 heterodimerizes with subunit B and three such heterodimers form a hexameric ring structure with alternating B and D3 subunits. The D3 - B heterodimer also assembles into a heptameric ring containing D1, D2, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=22.08 E-value=2.1e+02 Score=20.88 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=20.6
Q ss_pred ccEEEECcEEEcCCCc--eeeeEEEeCCEEEEe
Q 009282 53 SKILIKGGTVVNAHHQ--QIADVYVEDGIVVAV 83 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~--~~~~V~I~~grI~~V 83 (538)
+.+.++|+.+...++. .-+.+.|+|..|..|
T Consensus 34 MNl~L~~~~~~~~~g~~~~~~~v~IRG~nI~~v 66 (70)
T cd01721 34 MNCQLKDVTVTARDGRVSQLEQVYIRGSKIRFF 66 (70)
T ss_pred ceeEEEEEEEECCCCcEeEcCcEEEeCCEEEEE
Confidence 4567777776554432 346788888888776
No 309
>cd08213 RuBisCO_large_III Ribulose bisphosphate carboxylase large chain, Form III. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV , which differ in their taxonomic distribution and subunit composition. Form III is only found in archaea and forms large subunit oligomers (dimers or decamers) that do not include small subunits.
Probab=21.76 E-value=7.9e+02 Score=25.24 Aligned_cols=112 Identities=12% Similarity=-0.012 Sum_probs=63.3
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcc----cceeeeeeeeeecCChhhHHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (538)
.+++.+.......+..|+--+-|-..-.++ ...+.+....+...+ .--...+...++...++..+..+... +
T Consensus 144 lsp~~~a~~~y~~~~GGvD~iKDDE~l~~q~~~p~~~Rv~~~~~a~~~a~~eTG~~~~y~~NiT~~~~em~~ra~~a~-e 222 (412)
T cd08213 144 LSPEEHAEVAYEALVGGVDLVKDDENLTSQPFNRFEERAKESLKARDKAEAETGERKAYLANITAPVREMERRAELVA-D 222 (412)
T ss_pred CCHHHHHHHHHHHHhcCCcccccCccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEEEecCCHHHHHHHHHHHH-H
Confidence 577888888888999999888765333222 344444444443322 11122223334433344444444444 6
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~ 239 (538)
.|.+.+-+-.. ..-...++.+.+.+...+++++.|-....
T Consensus 223 ~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~ihaHra~~g 262 (412)
T cd08213 223 LGGKYVMIDVV-----VAGWSALQYLRDLAEDYGLAIHAHRAMHA 262 (412)
T ss_pred hCCCeEEeecc-----ccChHHHHHHHHhccccCeEEEECCCcce
Confidence 78876644222 22345577777777678999999986553
No 310
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=21.59 E-value=2.1e+02 Score=23.73 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=34.4
Q ss_pred CceEEecCCCeeeccccccccccccccC----CCC-----ChhhHHHHHHHHHhCCcEEEecccC
Q 009282 92 DVKVLDATGKFVMPGGIDPHTHLAMEFM----GSE-----TIDDFFSGQAAALAGGTTMHIDFVI 147 (538)
Q Consensus 92 ~~~vID~~G~~v~PGlID~H~H~~~~~~----~~~-----~~~~~~~~~~~~l~~GvTt~~d~~~ 147 (538)
.+..+|+. ..|.|-+||.|.|...... |.. -..+....+...-..|||.+.....
T Consensus 6 ~~~~fdld-ytiwP~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt 69 (144)
T KOG4549|consen 6 EAMQFDLD-YTIWPRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRT 69 (144)
T ss_pred ceeEEecc-ceeeeEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCC
Confidence 46678874 5899999999999866411 111 1122333445556789998874433
No 311
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=21.50 E-value=6.8e+02 Score=23.45 Aligned_cols=93 Identities=14% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
-.+.+|+.. .....++.+.+++.++.|+++|+.+..- .+. .+... ....+.+.
T Consensus 24 yID~lKfg~--Gt~~l~~~~~l~eki~la~~~~V~v~~G-Gtl--~E~~~----------------------~q~~~~~Y 76 (237)
T TIGR03849 24 YITFVKFGW--GTSALIDRDIVKEKIEMYKDYGIKVYPG-GTL--FEIAH----------------------SKGKFDEY 76 (237)
T ss_pred heeeEEecC--ceEeeccHHHHHHHHHHHHHcCCeEeCC-ccH--HHHHH----------------------HhhhHHHH
Confidence 346777632 2223456788999999999999988743 111 11111 01345666
Q ss_pred HHHHHHcCCCEEEEe-----ccCHHHHHHHHHHHHcCCcEEEecc
Q 009282 276 IRLAEFVNTPLYVVH-----VMSMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 276 l~~~~~~~~~~~~~h-----~~~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
++.++.+|...+=.- .+.....+.++.+++.|..+..+..
T Consensus 77 l~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~g~~v~~EvG 121 (237)
T TIGR03849 77 LNECDELGFEAVEISDGSMEISLEERCNLIERAKDNGFMVLSEVG 121 (237)
T ss_pred HHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCeEecccc
Confidence 667777776553211 1223334777788888888876654
No 312
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=21.48 E-value=76 Score=24.88 Aligned_cols=6 Identities=50% Similarity=0.224 Sum_probs=3.3
Q ss_pred hhHHHH
Q 009282 5 MASAFT 10 (538)
Q Consensus 5 ~~~~~~ 10 (538)
|.|+.+
T Consensus 1 MaSK~~ 6 (95)
T PF07172_consen 1 MASKAF 6 (95)
T ss_pred CchhHH
Confidence 556654
No 313
>CHL00040 rbcL ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
Probab=21.16 E-value=7.9e+02 Score=25.79 Aligned_cols=111 Identities=13% Similarity=-0.019 Sum_probs=63.3
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcc----cceeeeeeeeee-cCChhhHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKN----SCMDYGFHMAIT-KWDEVVSDEMEVMVK 193 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 193 (538)
.+++.+..........|+--+-|-..-.++ ...+.+.+..+...+ .--...+...++ ...++..+..+...
T Consensus 180 Lsp~~~A~~~y~~~~GGvD~IKDDE~l~dq~~~p~~eRv~~~~~a~~~a~~eTG~~~~y~~NiTa~~~~em~~ra~~a~- 258 (475)
T CHL00040 180 LSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMYKRAVFAR- 258 (475)
T ss_pred CCHHHHHHHHHHHHcCCCcccccCccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceeeeccCCCCHHHHHHHHHHHH-
Confidence 577788777888899999888865333222 444444444443322 111111222344 23344444444444
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
+.|...+-+-.. ..-...++.+.+.|+..+++++.|....
T Consensus 259 e~G~~~~mv~~~-----~~G~~al~~l~~~~~~~~l~IhaHrA~~ 298 (475)
T CHL00040 259 ELGVPIVMHDYL-----TGGFTANTSLAHYCRDNGLLLHIHRAMH 298 (475)
T ss_pred HcCCceEEEecc-----ccccchHHHHHHHhhhcCceEEeccccc
Confidence 778877644222 1224457777777777899999998654
No 314
>PRK13399 fructose-1,6-bisphosphate aldolase; Provisional
Probab=20.92 E-value=8.4e+02 Score=24.34 Aligned_cols=106 Identities=10% Similarity=-0.014 Sum_probs=62.8
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.+.+....+-+.+++.+...+--. ..........+.+..++.. |++. ..++..|....... +.+..+.+.|.++..
T Consensus 26 ~n~e~~~avi~AAEe~~sPvIlq~-s~~~~~~~g~~~~~~~v~~~ae~~~~VPVaLHLDHg~~~-e~i~~Ai~~GFtSVM 103 (347)
T PRK13399 26 NNMEQILAIMEAAEATDSPVILQA-SRGARKYAGDAMLRHMVLAAAEMYPDIPICLHQDHGNSP-ATCQSAIRSGFTSVM 103 (347)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-CcchhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCH-HHHHHHHhcCCCEEE
Confidence 344555555555545555544221 1111122345666666654 4556 48999999665544 455677778987654
Q ss_pred cccccC-------CchHHHHHHHHHHHHHHHcCCCEE
Q 009282 258 GHALSR-------PPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 258 ~~~~~~-------~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
...... |.....+...+..++++..|..+-
T Consensus 104 iDgS~l~~~~~~~~~eeNI~~Trevve~Ah~~GvsVE 140 (347)
T PRK13399 104 MDGSLLADGKTPASYDYNVDVTRRVTEMAHAVGVSVE 140 (347)
T ss_pred EeCCCCCCCCCccCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 333323 356667778899999988887653
No 315
>COG0413 PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism]
Probab=20.87 E-value=3.7e+02 Score=25.46 Aligned_cols=46 Identities=26% Similarity=0.295 Sum_probs=34.6
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
.++.++...++.++.|++.+|+- .-+++.+.++..-+.|+||+.|.
T Consensus 92 ~~~a~~nA~r~~ke~gA~aVKlE---------GG~~~~~~i~~L~~~gIPV~gHi 137 (268)
T COG0413 92 PEQALKNAARLMKEAGADAVKLE---------GGEEMAETIKRLTERGIPVMGHI 137 (268)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEc---------CCHHHHHHHHHHHHcCCceEEEe
Confidence 34556666666667899999983 12567777778888999999998
No 316
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=20.80 E-value=8.4e+02 Score=24.45 Aligned_cols=42 Identities=21% Similarity=0.131 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEec---cCHHH-HHHHHHHHHcCCcE
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHV---MSMDA-MEEIAKARKAGQRV 310 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~---~~~~~-~~~i~~~~~~g~~v 310 (538)
.+.+.+.++.....+.++.+.-. .+... .+.++.+.+.|+..
T Consensus 140 f~~~~~~i~~l~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~lgv~~ 185 (378)
T PRK05301 140 FAKKLAVARLVKAHGYPLTLNAVIHRHNIDQIPRIIELAVELGADR 185 (378)
T ss_pred HHHHHHHHHHHHHCCCceEEEEEeecCCHHHHHHHHHHHHHcCCCE
Confidence 45566667777777776654222 22222 24556667777754
No 317
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=20.77 E-value=7.5e+02 Score=23.67 Aligned_cols=111 Identities=13% Similarity=0.051 Sum_probs=56.1
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
+.|++++-+.-.......++.++-+++++.+.+..-.+.+++. +..+..+..+.+.+.|..+..-..+.-......+.
T Consensus 31 ~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~vi~gvg~~~~~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~~~~ 110 (279)
T cd00953 31 SKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDKVIFQVGSLNLEESIELARAAKSFGIYAIASLPPYYFPGIPEEW 110 (279)
T ss_pred HcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeCcCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCCCHHH
Confidence 6777777554333334566777777777665443334666663 33344445556666776543221111000011233
Q ss_pred HHH-HHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 272 TTR-AIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 272 i~~-~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
+.+ ...++. +.++.+.+..... ..+.+.++.+.
T Consensus 111 i~~yf~~v~~--~lpv~iYn~P~~tg~~l~~~~l~~L~~~ 148 (279)
T cd00953 111 LIKYFTDISS--PYPTFIYNYPKATGYDINARMAKEIKKA 148 (279)
T ss_pred HHHHHHHHHh--cCCEEEEeCccccCCCCCHHHHHHHHhc
Confidence 433 333333 7788887754211 13667777643
No 318
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=20.60 E-value=8.4e+02 Score=24.19 Aligned_cols=41 Identities=24% Similarity=0.183 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEec---cCHHH-HHHHHHHHHcCCc
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHV---MSMDA-MEEIAKARKAGQR 309 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~---~~~~~-~~~i~~~~~~g~~ 309 (538)
.+.+.+.++.....+.++.+.-. .+... .+.++.+++.|+.
T Consensus 131 f~~v~~~i~~l~~~g~~v~v~~vv~~~N~~~l~~~~~~~~~lg~~ 175 (358)
T TIGR02109 131 FEQKLAMARAVKAAGLPLTLNFVIHRHNIDQIPEIIELAIELGAD 175 (358)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccCCHHHHHHHHHHHHHcCCC
Confidence 34555666666677766544221 22222 2445556666764
No 319
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=20.40 E-value=6.4e+02 Score=22.71 Aligned_cols=157 Identities=17% Similarity=0.091 Sum_probs=76.1
Q ss_pred HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCC----hhhHHHHHHHHHHcCCcEEEEEee
Q 009282 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWD----EVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
.++++..+|-..++-- ..+.+.+..+...- ++ +|+.-.....+ --.++++.++. +.|++.+-+-..
T Consensus 4 mA~Aa~~gGA~giR~~-------~~~dI~aik~~v~l-PI-IGi~K~~y~~~~V~ITPT~~ev~~l~-~aGadIIAlDaT 73 (192)
T PF04131_consen 4 MAKAAEEGGAVGIRAN-------GVEDIRAIKKAVDL-PI-IGIIKRDYPDSDVYITPTLKEVDALA-EAGADIIALDAT 73 (192)
T ss_dssp HHHHHHHCT-SEEEEE-------SHHHHHHHHTTB-S--E-EEE-B-SBTTSS--BS-SHHHHHHHH-HCT-SEEEEE-S
T ss_pred HHHHHHHCCceEEEcC-------CHHHHHHHHHhcCC-CE-EEEEeccCCCCCeEECCCHHHHHHHH-HcCCCEEEEecC
Confidence 4667777887777732 24455554443321 11 11111000000 12477888888 889999876432
Q ss_pred eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCC----CcccccccCCc-hHHHHHHHHHHHHHH
Q 009282 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT----GPEGHALSRPP-LLEGEATTRAIRLAE 280 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~-~~~~~~i~~~l~~~~ 280 (538)
. .+ .++.+.+++...++.+..++..+.+.++..... +.|.. ...|++...+. ....+-+.++ ..
T Consensus 74 ~--R~--Rp~~l~~li~~i~~~~~l~MADist~ee~~~A~----~~G~D~I~TTLsGYT~~t~~~~pD~~lv~~l---~~ 142 (192)
T PF04131_consen 74 D--RP--RPETLEELIREIKEKYQLVMADISTLEEAINAA----ELGFDIIGTTLSGYTPYTKGDGPDFELVREL---VQ 142 (192)
T ss_dssp S--SS---SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHHH----HTT-SEEE-TTTTSSTTSTTSSHHHHHHHHH---HH
T ss_pred C--CC--CCcCHHHHHHHHHHhCcEEeeecCCHHHHHHHH----HcCCCEEEcccccCCCCCCCCCCCHHHHHHH---Hh
Confidence 2 22 238888999999988899999888765543333 33432 11222222222 2222333332 22
Q ss_pred HcCCCEEEEeccCHHHHHHHHHHHHcCCcE
Q 009282 281 FVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (538)
Q Consensus 281 ~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v 310 (538)
.+.+++...-.+ ++ +.+.++-+.|...
T Consensus 143 -~~~pvIaEGri~-tp-e~a~~al~~GA~a 169 (192)
T PF04131_consen 143 -ADVPVIAEGRIH-TP-EQAAKALELGAHA 169 (192)
T ss_dssp -TTSEEEEESS---SH-HHHHHHHHTT-SE
T ss_pred -CCCcEeecCCCC-CH-HHHHHHHhcCCeE
Confidence 366665544333 33 5666677777653
No 320
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=20.25 E-value=7.9e+02 Score=23.74 Aligned_cols=110 Identities=11% Similarity=0.052 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHH---HHHHHHhcccceeeeeeeeee-cCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGF---EAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 192 (538)
|..+.+.+.......+..||..++-.+..+.. ...+.. +...+... +.+.+ ..+.. ....+..+..+..
T Consensus 16 g~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~-g~~pv--i~gv~~~~t~~ai~~a~~A- 91 (294)
T TIGR02313 16 GDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIA-GRIPF--APGTGALNHDETLELTKFA- 91 (294)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhC-CCCcE--EEECCcchHHHHHHHHHHH-
Confidence 45667777777888899999998866543332 222222 22222221 11111 11222 2233444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhc-CCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~-g~~v~~H~ 235 (538)
.+.|++.+-+..-+ ....+.+.+.+.++. +... ++++.+.-
T Consensus 92 ~~~Gad~v~v~pP~--y~~~~~~~l~~~f~~ia~a~~~lpv~iYn 134 (294)
T TIGR02313 92 EEAGADAAMVIVPY--YNKPNQEALYDHFAEVADAVPDFPIIIYN 134 (294)
T ss_pred HHcCCCEEEEcCcc--CCCCCHHHHHHHHHHHHHhccCCCEEEEe
Confidence 37899998665432 233466777776654 5666 78888774
No 321
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R.rubrum RLP. RLP from Rhodospirillum rubrum plays a role in an uncharacterized sulfur salvage pathway and has been shown to catalyze a novel isomerization reaction that converts 5-methylthio-d-ribulose 1-phosphate to a 3:1 mixture of 1-methylthioxylulose 5-phosphate and 1-methylthioribulose 5-phosphate.
Probab=20.21 E-value=8.9e+02 Score=24.35 Aligned_cols=108 Identities=9% Similarity=-0.008 Sum_probs=57.5
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccc----eeeeeeeeeecCChhhHHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSC----MDYGFHMAITKWDEVVSDEMEVMVKE 194 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (538)
.+++.+.......+..|+-.+-|-..-.+. ...+.++...+...+.. -...+...++....+..+..+... +
T Consensus 138 L~~~~~a~~~~~~~~gGvD~IKdDe~l~~~~~~p~~eRv~~v~~av~~a~~eTG~~~~y~~Nita~~~em~~ra~~a~-~ 216 (364)
T cd08210 138 LSAAELAELAYAFALGGIDIIKDDHGLADQPFAPFEERVKACQEAVAEANAETGGRTLYAPNVTGPPTQLLERARFAK-E 216 (364)
T ss_pred CCHHHHHHHHHHHHhcCCCeeecCccccCccCCCHHHHHHHHHHHHHHHHhhcCCcceEEEecCCCHHHHHHHHHHHH-H
Confidence 567777778888899999999766433332 34444444444332211 112222333333334444444443 7
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcC-CeEEEEcCCh
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAENG 238 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g-~~v~~H~~~~ 238 (538)
.|++.+-+.... +-...++.+ +++.+ ++++.|-...
T Consensus 217 ~Ga~~vMv~~~~-----~G~~~~~~l---~~~~~~l~i~aHra~~ 253 (364)
T cd08210 217 AGAGGVLIAPGL-----TGLDTFREL---AEDFDFLPILAHPAFA 253 (364)
T ss_pred cCCCEEEeeccc-----chHHHHHHH---HhcCCCcEEEEccccc
Confidence 888877553321 122333333 34567 8888886443
No 322
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=20.17 E-value=3.8e+02 Score=29.91 Aligned_cols=178 Identities=19% Similarity=0.138 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhcCCeE-EEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 214 DELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v-~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
-|.--+++++|.++|+.. ++..+++.....-.+.-..+-+- ...-+...+.+|++.++.++..|...+.....
T Consensus 16 gEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG------~~~~Pi~aYL~IdeII~iAk~~gaDaIhPGYG 89 (1149)
T COG1038 16 GEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIG------EGKGPVEAYLSIDEIIRIAKRSGADAIHPGYG 89 (1149)
T ss_pred chhhHHHHHHHHhcCceEEEEeeccccchhhhccccceeeec------CCCCchHHhccHHHHHHHHHHcCCCeecCCcc
Confidence 455668899999999854 44444443211111110011000 01223455788999999999999876543332
Q ss_pred C-HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 293 S-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 293 ~-~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
. ....+..+++.+.|+.. ..|.+.++.+..+ ...+-..+.++|+++.-|||.++.
T Consensus 90 fLSEn~efA~~c~eaGI~F-IGP~~e~ld~~Gd-----------------------Kv~Ar~~A~~agvPvipgt~~~~~ 145 (1149)
T COG1038 90 FLSENPEFARACAEAGITF-IGPKPEVLDMLGD-----------------------KVKARNAAIKAGVPVIPGTDGPIE 145 (1149)
T ss_pred cccCCHHHHHHHHHcCCEE-eCCCHHHHHHhcc-----------------------HHHHHHHHHHcCCCccCCCCCCcc
Confidence 2 22237788889899754 4555543322111 112334678889999999997655
Q ss_pred Chhhhh-c-CccCc---ccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 372 NSTQKA-F-GIDDF---RKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 372 ~~~~~~-~-~~~~~---~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
+..+-. + ...+| -.+..|-.|..++ .++.. -.+.+++..|++.+-.+||-
T Consensus 146 ~~ee~~~fa~~~gyPvmiKA~~GGGGRGMR-------~vr~~-~~l~~~~~~AksEAkaAFG~ 200 (1149)
T COG1038 146 TIEEALEFAEEYGYPVMIKAAAGGGGRGMR-------VVRSE-ADLAEAFERAKSEAKAAFGN 200 (1149)
T ss_pred cHHHHHHHHHhcCCcEEEEEccCCCcccee-------eecCH-HHHHHHHHHHHHHHHHhcCC
Confidence 443211 1 00011 1111221221111 22222 45778888899999999997
Done!