Query 009282
Match_columns 538
No_of_seqs 224 out of 1855
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 22:59:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 1.9E-62 6.5E-67 510.7 45.8 463 54-519 2-465 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 1.1E-59 3.8E-64 489.2 48.8 454 54-509 2-458 (461)
3 2ftw_A Dihydropyrimidine amido 100.0 9E-58 3.1E-62 481.3 48.7 473 52-524 7-482 (521)
4 1gkp_A Hydantoinase; hydrolase 100.0 8.5E-57 2.9E-61 468.5 47.6 453 55-509 2-456 (458)
5 2fty_A Dihydropyrimidinase; al 100.0 7.7E-57 2.6E-61 475.6 46.6 455 52-508 2-521 (559)
6 2vr2_A Dihydropyrimidinase; hy 100.0 1.4E-56 4.8E-61 474.1 47.5 470 52-521 26-503 (541)
7 3e74_A Allantoinase; (beta/alp 100.0 1.4E-56 4.7E-61 465.7 44.7 442 50-508 20-472 (473)
8 2vm8_A Dihydropyrimidinase-rel 100.0 3E-56 1E-60 469.1 45.9 469 52-520 25-497 (501)
9 1nfg_A D-hydantoinase; TIM bar 100.0 1.9E-54 6.4E-59 450.6 46.0 452 54-510 2-456 (457)
10 1gkr_A Hydantoinase, non-ATP d 100.0 1E-53 3.4E-58 445.3 44.5 447 53-510 2-455 (458)
11 3hm7_A Allantoinase; metallo-d 100.0 1E-53 3.5E-58 443.4 42.8 429 52-493 5-441 (448)
12 3gri_A Dihydroorotase, dhoase; 100.0 6.3E-53 2.1E-57 433.7 35.4 420 55-493 2-424 (424)
13 3mpg_A Dihydroorotase, dhoase; 100.0 7.3E-52 2.5E-56 426.9 33.4 422 54-495 2-427 (428)
14 2gwn_A Dihydroorotase; zinc-bi 100.0 1.4E-49 4.6E-54 412.5 37.8 435 52-506 3-450 (452)
15 2z00_A Dihydroorotase; zinc bi 100.0 5.5E-47 1.9E-51 390.7 38.5 411 55-493 2-426 (426)
16 1xrt_A Dihydroorotase, dhoase; 100.0 1.3E-46 4.5E-51 392.0 36.2 417 52-491 46-467 (467)
17 4f0r_A 5-methylthioadenosine/S 100.0 2E-41 7E-46 351.3 30.4 380 50-498 3-421 (447)
18 3lnp_A Amidohydrolase family p 100.0 1.4E-40 4.8E-45 347.0 34.8 380 50-498 20-448 (468)
19 3h4u_A Amidohydrolase; signatu 100.0 6.4E-41 2.2E-45 350.7 30.8 379 52-498 28-459 (479)
20 4dyk_A Amidohydrolase; adenosi 100.0 9.6E-41 3.3E-45 346.6 29.4 382 50-504 5-428 (451)
21 4dzh_A Amidohydrolase; adenosi 100.0 1.7E-40 5.8E-45 346.3 29.1 378 52-498 13-430 (472)
22 3gnh_A L-lysine, L-arginine ca 100.0 1.8E-40 6.1E-45 339.5 26.6 351 54-490 3-402 (403)
23 3feq_A Putative amidohydrolase 100.0 1.4E-40 4.8E-45 342.5 24.5 361 52-497 3-417 (423)
24 2r8c_A Putative amidohydrolase 100.0 2.2E-40 7.6E-45 341.2 25.8 367 52-497 3-420 (426)
25 3ls9_A Triazine hydrolase; atr 100.0 8.5E-40 2.9E-44 340.0 30.2 378 55-498 2-440 (456)
26 3gip_A N-acyl-D-glutamate deac 100.0 8.1E-39 2.8E-43 333.4 35.4 392 51-507 5-479 (480)
27 2paj_A Putative cytosine/guani 100.0 4.2E-39 1.4E-43 338.0 28.9 377 52-498 9-463 (492)
28 2ood_A BLR3880 protein; PSI-II 100.0 1E-38 3.6E-43 332.8 20.6 381 54-493 4-468 (475)
29 3be7_A Zn-dependent arginine c 100.0 2.3E-37 7.7E-42 317.0 28.5 351 51-493 4-403 (408)
30 2qt3_A N-isopropylammelide iso 100.0 1.1E-36 3.9E-41 311.2 33.5 353 52-496 4-403 (403)
31 2p9b_A Possible prolidase; pro 100.0 5.9E-38 2E-42 326.1 23.7 366 52-498 12-442 (458)
32 2i9u_A Cytosine/guanine deamin 100.0 1.3E-37 4.4E-42 321.9 25.2 374 52-493 8-431 (439)
33 1rk6_A D-aminoacylase; TIM bar 100.0 5.1E-37 1.7E-41 321.8 29.4 393 52-507 20-494 (496)
34 2bb0_A Imidazolonepropionase; 100.0 6.1E-36 2.1E-40 307.6 32.8 347 53-495 5-420 (421)
35 2qs8_A XAA-Pro dipeptidase; am 100.0 4.9E-36 1.7E-40 308.0 31.6 348 52-490 6-412 (418)
36 3hpa_A Amidohydrolase; signatu 100.0 2.5E-36 8.5E-41 315.3 29.2 388 52-505 28-465 (479)
37 4aql_A Guanine deaminase; hydr 100.0 3.7E-36 1.3E-40 313.0 27.9 382 52-493 30-474 (476)
38 2q09_A Imidazolonepropionase; 100.0 6.6E-36 2.3E-40 306.8 28.8 347 53-493 5-410 (416)
39 2ogj_A Dihydroorotase; TIM bar 100.0 5E-37 1.7E-41 315.2 19.9 359 50-507 12-403 (417)
40 1ra0_A Cytosine deaminase; alp 100.0 1.9E-36 6.6E-41 312.2 24.1 367 52-497 7-417 (430)
41 2ics_A Adenine deaminase; TIM 100.0 4.8E-37 1.6E-41 311.4 18.4 354 52-494 4-375 (379)
42 1p1m_A Hypothetical protein TM 100.0 6.1E-37 2.1E-41 313.5 15.4 354 55-498 1-388 (406)
43 2puz_A Imidazolonepropionase; 100.0 9.1E-35 3.1E-39 298.7 30.6 344 52-489 14-418 (419)
44 2vun_A Enamidase; nicotinate d 100.0 3E-34 1E-38 291.6 33.3 351 53-496 2-377 (386)
45 1e9y_B Urease subunit beta; hy 100.0 8.8E-36 3E-40 313.1 21.5 362 52-496 65-465 (569)
46 3v7p_A Amidohydrolase family p 100.0 5.2E-36 1.8E-40 307.9 16.5 371 55-498 2-412 (427)
47 3pnu_A Dihydroorotase; TIM bar 100.0 1.8E-34 6E-39 285.1 24.5 323 99-479 22-358 (359)
48 4f0l_A Amidohydrolase; ssgcid, 100.0 1.5E-34 5.1E-39 300.5 24.4 366 52-495 11-440 (458)
49 3ooq_A Amidohydrolase; structu 100.0 2.4E-33 8.3E-38 285.6 30.4 339 52-493 4-390 (396)
50 3nqb_A Adenine deaminase 2; PS 100.0 2.4E-33 8.3E-38 297.5 30.8 332 51-497 33-380 (608)
51 4ac7_C Urease subunit alpha; h 100.0 1.6E-34 5.6E-39 298.5 17.9 343 52-491 66-460 (570)
52 4ubp_C Protein (urease (chain 100.0 2.7E-34 9.1E-39 296.9 18.8 343 52-491 66-460 (570)
53 2vhl_A N-acetylglucosamine-6-p 100.0 3.6E-33 1.2E-37 284.5 26.0 361 52-496 2-395 (396)
54 3iv8_A N-acetylglucosamine-6-p 100.0 1.7E-33 5.8E-38 279.6 22.8 356 55-490 5-381 (381)
55 3mdu_A N-formimino-L-glutamate 100.0 8.4E-34 2.9E-38 294.0 21.2 362 57-496 4-436 (453)
56 1yrr_A N-acetylglucosamine-6-p 100.0 1.5E-33 5.1E-38 285.9 19.7 352 55-491 2-382 (382)
57 4gy7_A Urease; JACK bean, hydr 100.0 4.8E-35 1.7E-39 317.2 8.1 366 52-496 336-736 (840)
58 1onw_A Isoaspartyl dipeptidase 100.0 9.3E-32 3.2E-36 273.5 31.1 355 53-497 8-384 (390)
59 3icj_A Uncharacterized metal-d 100.0 1.4E-32 4.8E-37 287.3 21.8 329 54-456 37-506 (534)
60 2imr_A Hypothetical protein DR 100.0 8.9E-33 3E-37 283.7 18.9 342 52-451 36-418 (420)
61 2z26_A Dihydroorotase, dhoase; 100.0 2.6E-31 8.7E-36 264.4 23.8 330 99-479 4-346 (347)
62 3mtw_A L-arginine carboxypepti 100.0 1.3E-30 4.6E-35 263.0 26.1 352 54-488 3-400 (403)
63 4ep8_C Urease subunit alpha; a 100.0 6.1E-33 2.1E-37 295.2 6.2 379 51-495 63-461 (566)
64 3mkv_A Putative amidohydrolase 100.0 1.5E-29 5.1E-34 256.7 25.2 354 52-490 3-413 (426)
65 1o12_A N-acetylglucosamine-6-p 99.9 1.2E-26 4E-31 233.9 20.2 318 68-492 27-376 (376)
66 3ggm_A Uncharacterized protein 99.6 6.1E-15 2.1E-19 112.8 7.8 66 52-117 3-73 (81)
67 1bf6_A Phosphotriesterase homo 99.2 2.5E-10 8.7E-15 110.3 17.4 260 106-428 6-291 (291)
68 2ob3_A Parathion hydrolase; me 99.2 5.6E-10 1.9E-14 109.5 18.0 275 106-428 16-325 (330)
69 1zzm_A Putative deoxyribonucle 99.1 2.4E-08 8.1E-13 94.6 22.6 245 107-429 5-258 (259)
70 2vc7_A Aryldialkylphosphatase; 99.0 1.4E-08 4.8E-13 99.1 18.1 268 106-428 17-314 (314)
71 3rcm_A TATD family hydrolase; 99.0 6.2E-08 2.1E-12 92.4 20.5 252 107-430 3-265 (287)
72 3ovg_A Amidohydrolase; structu 98.9 9.7E-08 3.3E-12 93.8 20.6 279 106-445 21-345 (363)
73 2y1h_A Putative deoxyribonucle 98.9 9E-07 3.1E-11 84.2 25.1 241 106-430 5-266 (272)
74 1xwy_A DNAse TATD, deoxyribonu 98.8 1.9E-07 6.5E-12 88.6 18.8 250 107-429 5-262 (264)
75 3rys_A Adenosine deaminase 1; 98.8 1.2E-06 4E-11 85.6 22.5 155 196-430 164-321 (343)
76 2pgf_A Adenosine deaminase; me 98.7 3E-07 1E-11 91.3 16.4 143 214-430 214-359 (371)
77 3pnz_A Phosphotriesterase fami 98.7 3E-07 1E-11 89.4 15.7 262 106-429 17-328 (330)
78 3k2g_A Resiniferatoxin-binding 98.7 8.4E-07 2.9E-11 87.5 18.9 248 128-430 89-355 (364)
79 3rhg_A Putative phophotriester 98.7 1.9E-06 6.7E-11 84.8 20.5 246 129-431 79-346 (365)
80 1yix_A Deoxyribonuclease YCFH; 98.6 1.3E-06 4.3E-11 82.8 17.7 246 107-430 3-257 (265)
81 3pao_A Adenosine deaminase; st 98.6 5.7E-07 1.9E-11 87.2 15.4 154 196-429 161-317 (326)
82 3gtx_A Organophosphorus hydrol 98.6 1.3E-06 4.6E-11 85.2 16.9 271 106-428 32-339 (339)
83 3tn4_A Phosphotriesterase; lac 98.5 5.4E-06 1.9E-10 81.2 19.8 266 106-427 52-358 (360)
84 3gg7_A Uncharacterized metallo 98.5 2.7E-06 9.3E-11 79.3 15.7 233 107-429 3-244 (254)
85 3ipw_A Hydrolase TATD family p 98.5 1.4E-05 4.6E-10 77.1 20.6 261 106-430 27-323 (325)
86 3iar_A Adenosine deaminase; pu 98.4 1.3E-05 4.5E-10 78.7 19.3 141 215-430 192-333 (367)
87 4i6k_A Amidohydrolase family p 98.4 1.2E-05 4.1E-10 77.3 17.5 129 103-237 23-159 (294)
88 2xio_A Putative deoxyribonucle 98.4 2.1E-05 7.2E-10 75.8 18.5 261 106-435 2-297 (301)
89 2gzx_A Putative TATD related D 98.3 3.5E-05 1.2E-09 72.7 19.4 244 107-430 2-256 (265)
90 1j6o_A TATD-related deoxyribon 98.3 8.8E-06 3E-10 77.1 15.2 246 107-429 13-265 (268)
91 3cjp_A Predicted amidohydrolas 98.1 0.0001 3.5E-09 69.8 17.6 51 183-237 102-153 (272)
92 2ffi_A 2-pyrone-4,6-dicarboxyl 98.1 3.6E-05 1.2E-09 73.6 14.1 127 105-238 12-147 (288)
93 2dvt_A Thermophilic reversible 98.1 5.3E-05 1.8E-09 73.9 15.1 55 183-237 108-167 (327)
94 2f6k_A Metal-dependent hydrola 97.8 0.0005 1.7E-08 66.2 16.9 56 182-238 103-158 (307)
95 3guw_A Uncharacterized protein 97.8 0.00051 1.8E-08 64.2 14.9 161 107-313 2-179 (261)
96 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.7 0.0022 7.5E-08 61.6 18.8 151 103-293 23-183 (303)
97 4gxw_A Adenosine deaminase; am 97.5 0.00067 2.3E-08 66.9 12.5 148 212-430 194-342 (380)
98 3e2v_A 3'-5'-exonuclease; stru 97.5 0.0035 1.2E-07 61.8 16.8 132 105-238 12-206 (401)
99 3irs_A Uncharacterized protein 97.5 0.0031 1.1E-07 60.2 15.9 229 127-434 49-285 (291)
100 4do7_A Amidohydrolase 2; enzym 97.4 0.0016 5.3E-08 62.7 12.5 128 107-238 5-145 (303)
101 2a3l_A AMP deaminase, AMPD; at 97.1 0.00048 1.6E-08 72.7 6.0 101 288-430 541-642 (701)
102 3lgd_A Adenosine deaminase CEC 96.7 0.035 1.2E-06 56.5 15.6 108 213-369 307-417 (508)
103 3ij6_A Uncharacterized metal-d 96.7 0.027 9.1E-07 54.2 14.2 55 182-237 110-164 (312)
104 3nur_A Amidohydrolase; TIM bar 96.1 0.19 6.5E-06 49.1 16.6 56 182-238 141-196 (357)
105 3qy7_A Tyrosine-protein phosph 94.4 0.7 2.4E-05 42.8 13.7 39 107-145 1-40 (262)
106 2wm1_A 2-amino-3-carboxymucona 93.5 0.32 1.1E-05 47.0 9.9 54 183-237 124-177 (336)
107 4inf_A Metal-dependent hydrola 93.3 2.7 9.2E-05 41.1 16.3 55 183-238 160-214 (373)
108 2hbv_A 2-amino-3-carboxymucona 92.7 0.45 1.5E-05 45.9 9.7 54 182-237 127-180 (334)
109 1itu_A Renal dipeptidase; glyc 76.1 38 0.0013 32.7 13.1 57 359-429 279-336 (369)
110 2wje_A CPS4B, tyrosine-protein 76.0 2.3 8E-05 38.8 4.4 40 105-144 3-43 (247)
111 2gwg_A 4-oxalomesaconate hydra 75.1 8.8 0.0003 36.9 8.5 57 182-238 122-182 (350)
112 3lmz_A Putative sugar isomeras 72.6 28 0.00096 31.4 11.0 103 185-315 32-134 (257)
113 3p6l_A Sugar phosphate isomera 71.8 24 0.00082 31.9 10.3 105 185-316 24-137 (262)
114 2yxo_A Histidinol phosphatase; 71.5 59 0.002 29.4 16.4 34 107-143 1-34 (267)
115 2q02_A Putative cytoplasmic pr 67.7 51 0.0017 29.7 11.7 84 187-292 23-107 (272)
116 2qpx_A Predicted metal-depende 66.7 89 0.0031 30.1 13.6 22 409-430 345-371 (376)
117 1tx2_A DHPS, dihydropteroate s 65.2 63 0.0021 30.1 11.5 120 184-315 65-206 (297)
118 3aam_A Endonuclease IV, endoiv 64.8 80 0.0027 28.4 15.3 114 185-315 16-141 (270)
119 1eye_A DHPS 1, dihydropteroate 63.1 35 0.0012 31.5 9.3 121 183-315 30-179 (280)
120 1n7k_A Deoxyribose-phosphate a 63.1 43 0.0015 30.0 9.6 137 120-290 31-168 (234)
121 1aj0_A DHPS, dihydropteroate s 61.8 53 0.0018 30.4 10.2 120 183-315 39-187 (282)
122 3ly0_A Dipeptidase AC. metallo 61.3 48 0.0016 31.9 10.1 56 359-429 297-353 (364)
123 3id7_A Dipeptidase; streptomyc 58.6 23 0.0008 34.6 7.5 57 359-429 311-368 (400)
124 3neh_A Renal dipeptidase famil 55.6 56 0.0019 30.8 9.4 105 291-430 204-311 (318)
125 2nx9_A Oxaloacetate decarboxyl 53.0 1.8E+02 0.006 29.0 13.0 123 128-254 103-228 (464)
126 3m5v_A DHDPS, dihydrodipicolin 52.8 1.5E+02 0.005 27.6 12.3 111 194-306 39-161 (301)
127 2i5g_A Amidohydrolase; NYSGXRC 50.1 82 0.0028 29.7 9.7 32 396-428 289-320 (325)
128 3s5o_A 4-hydroxy-2-oxoglutarat 49.2 1.7E+02 0.0057 27.3 12.1 112 120-235 30-149 (307)
129 1ub3_A Aldolase protein; schif 48.9 19 0.00066 31.9 4.8 133 120-290 14-153 (220)
130 3tva_A Xylose isomerase domain 48.9 1.5E+02 0.0053 26.8 12.8 92 193-292 31-124 (290)
131 1o5k_A DHDPS, dihydrodipicolin 47.3 1.4E+02 0.0049 27.7 10.9 110 120-235 28-145 (306)
132 3aal_A Probable endonuclease 4 46.9 1.7E+02 0.0059 26.7 11.8 88 185-292 20-116 (303)
133 3b40_A PVDM, probable dipeptid 46.6 1.8E+02 0.0062 28.4 11.8 56 359-429 350-406 (417)
134 1v77_A PH1877P, hypothetical p 46.6 26 0.00089 30.8 5.3 57 352-429 153-209 (212)
135 1f6y_A 5-methyltetrahydrofolat 46.6 1E+02 0.0034 28.1 9.4 122 184-316 27-163 (262)
136 3l21_A DHDPS, dihydrodipicolin 46.6 1.8E+02 0.0062 27.0 11.8 110 120-235 31-148 (304)
137 3l21_A DHDPS, dihydrodipicolin 46.5 1.8E+02 0.0063 26.9 11.8 111 194-306 47-168 (304)
138 3q94_A Fructose-bisphosphate a 46.1 1.3E+02 0.0044 27.8 10.0 131 180-312 29-177 (288)
139 2yci_X 5-methyltetrahydrofolat 45.9 1.7E+02 0.0058 26.7 10.9 124 182-316 34-172 (271)
140 3r12_A Deoxyribose-phosphate a 45.0 1.1E+02 0.0038 27.8 9.2 136 120-290 54-193 (260)
141 2yxg_A DHDPS, dihydrodipicolin 44.8 1.9E+02 0.0064 26.6 11.7 110 120-235 16-133 (289)
142 3q94_A Fructose-bisphosphate a 44.8 1.6E+02 0.0054 27.2 10.4 65 185-253 161-230 (288)
143 3oa3_A Aldolase; structural ge 44.6 1.4E+02 0.0047 27.5 9.9 104 120-232 69-179 (288)
144 3fkr_A L-2-keto-3-deoxyarabona 44.5 1.7E+02 0.0058 27.3 10.9 112 120-235 24-144 (309)
145 1q7z_A 5-methyltetrahydrofolat 44.2 2E+02 0.0067 29.6 12.1 122 184-316 342-476 (566)
146 2x7v_A Probable endonuclease 4 43.4 1.4E+02 0.0047 27.0 10.2 85 192-292 21-111 (287)
147 3n9r_A Fructose-bisphosphate a 43.4 1.2E+02 0.0042 28.2 9.4 106 181-288 26-133 (307)
148 2v9d_A YAGE; dihydrodipicolini 42.3 2.2E+02 0.0074 27.0 11.4 110 120-235 47-164 (343)
149 1xky_A Dihydrodipicolinate syn 42.3 2.1E+02 0.0072 26.5 12.4 110 120-235 28-145 (301)
150 2ehh_A DHDPS, dihydrodipicolin 41.6 2.1E+02 0.0073 26.3 12.0 110 120-235 16-133 (294)
151 2wqp_A Polysialic acid capsule 41.4 2.2E+02 0.0076 27.0 11.1 125 181-316 33-183 (349)
152 1qtw_A Endonuclease IV; DNA re 41.1 1.2E+02 0.0041 27.3 9.4 88 185-292 14-111 (285)
153 3flu_A DHDPS, dihydrodipicolin 41.0 2.2E+02 0.0075 26.3 12.6 110 194-305 39-159 (297)
154 1m65_A Hypothetical protein YC 40.8 14 0.00047 33.3 2.6 34 107-143 3-36 (245)
155 2vc6_A MOSA, dihydrodipicolina 40.7 2.1E+02 0.0072 26.3 10.9 110 120-235 16-133 (292)
156 1rvg_A Fructose-1,6-bisphospha 39.9 1.3E+02 0.0044 28.1 9.0 106 180-287 25-130 (305)
157 3rcm_A TATD family hydrolase; 39.6 2.3E+02 0.0078 26.0 12.1 42 264-307 108-149 (287)
158 1gvf_A Tagatose-bisphosphate a 39.6 2E+02 0.0069 26.5 10.3 65 185-253 157-226 (286)
159 3dx5_A Uncharacterized protein 39.5 2.1E+02 0.0073 25.7 11.2 112 185-315 17-144 (286)
160 3pm6_A Putative fructose-bisph 39.5 1E+02 0.0035 28.7 8.2 72 215-287 69-148 (306)
161 3tak_A DHDPS, dihydrodipicolin 39.1 2.3E+02 0.0079 26.0 12.4 110 194-305 33-153 (291)
162 3daq_A DHDPS, dihydrodipicolin 38.9 2.3E+02 0.008 26.0 12.3 111 194-306 34-155 (292)
163 1gvf_A Tagatose-bisphosphate a 38.8 1.3E+02 0.0043 27.8 8.8 107 180-288 26-133 (286)
164 2wkj_A N-acetylneuraminate lya 38.7 2.4E+02 0.0082 26.1 12.2 110 120-235 27-145 (303)
165 2rfg_A Dihydrodipicolinate syn 38.6 2E+02 0.0067 26.6 10.3 110 120-235 16-133 (297)
166 2ftp_A Hydroxymethylglutaryl-C 38.1 2.4E+02 0.0083 26.0 10.9 53 183-238 159-213 (302)
167 3na8_A Putative dihydrodipicol 38.1 2.5E+02 0.0086 26.1 11.6 111 194-306 56-178 (315)
168 3d0c_A Dihydrodipicolinate syn 37.6 2.6E+02 0.0088 26.1 11.6 109 120-235 28-144 (314)
169 3flu_A DHDPS, dihydrodipicolin 37.2 2.5E+02 0.0086 25.8 11.9 110 120-235 23-140 (297)
170 2ojp_A DHDPS, dihydrodipicolin 37.2 1.9E+02 0.0066 26.5 10.0 110 120-235 17-134 (292)
171 3e96_A Dihydrodipicolinate syn 37.0 2.1E+02 0.0073 26.6 10.4 111 194-305 44-159 (316)
172 3qze_A DHDPS, dihydrodipicolin 36.3 2.7E+02 0.0092 25.9 12.6 110 194-305 55-175 (314)
173 3si9_A DHDPS, dihydrodipicolin 36.0 2.7E+02 0.0093 25.9 11.5 110 194-305 54-174 (315)
174 3si9_A DHDPS, dihydrodipicolin 35.8 2.7E+02 0.0094 25.9 11.5 110 120-235 38-155 (315)
175 4e38_A Keto-hydroxyglutarate-a 35.7 2.1E+02 0.0073 25.3 9.5 98 122-241 43-140 (232)
176 3ndo_A Deoxyribose-phosphate a 35.5 1.4E+02 0.0048 26.5 8.2 139 120-290 24-166 (231)
177 3tak_A DHDPS, dihydrodipicolin 35.4 2.7E+02 0.0091 25.6 11.1 110 120-235 17-134 (291)
178 3cpr_A Dihydrodipicolinate syn 34.8 2.8E+02 0.0095 25.7 13.0 110 120-235 32-149 (304)
179 3dz1_A Dihydrodipicolinate syn 34.8 2.8E+02 0.0097 25.7 11.3 108 120-235 24-141 (313)
180 3na8_A Putative dihydrodipicol 34.8 2.7E+02 0.0091 26.0 10.6 110 120-235 40-157 (315)
181 2y5s_A DHPS, dihydropteroate s 34.8 2.1E+02 0.0071 26.5 9.6 121 182-315 46-195 (294)
182 3a5f_A Dihydrodipicolinate syn 34.7 2.2E+02 0.0076 26.1 10.0 108 122-235 19-134 (291)
183 2vc6_A MOSA, dihydrodipicolina 34.2 2.8E+02 0.0095 25.5 11.1 110 194-305 32-152 (292)
184 3qze_A DHDPS, dihydrodipicolin 34.0 2.9E+02 0.01 25.7 10.8 110 120-235 39-156 (314)
185 2r8w_A AGR_C_1641P; APC7498, d 33.9 3E+02 0.01 25.8 12.0 110 120-235 50-167 (332)
186 2isw_A Putative fructose-1,6-b 33.8 2.3E+02 0.008 26.5 9.8 106 180-287 26-133 (323)
187 3m5v_A DHDPS, dihydrodipicolin 33.7 2.9E+02 0.0098 25.5 11.5 110 120-235 23-141 (301)
188 3ngj_A Deoxyribose-phosphate a 33.7 90 0.0031 27.9 6.7 133 120-290 38-177 (239)
189 4dzi_A Putative TIM-barrel met 33.7 39 0.0013 33.4 4.7 56 182-238 175-234 (423)
190 3b4u_A Dihydrodipicolinate syn 33.2 2.9E+02 0.0099 25.4 12.6 110 120-235 19-140 (294)
191 3e96_A Dihydrodipicolinate syn 32.7 2.7E+02 0.0092 25.9 10.3 109 120-235 28-144 (316)
192 2yb1_A Amidohydrolase; HET: AM 32.3 63 0.0021 29.9 5.7 33 107-143 3-35 (292)
193 2r91_A 2-keto-3-deoxy-(6-phosp 31.7 3E+02 0.01 25.1 10.7 107 120-234 14-128 (286)
194 3ipw_A Hydrolase TATD family p 31.7 3.3E+02 0.011 25.5 12.4 42 264-307 148-190 (325)
195 1i60_A IOLI protein; beta barr 30.9 2.8E+02 0.0096 24.5 10.2 86 185-291 16-105 (278)
196 3eb2_A Putative dihydrodipicol 30.9 2.8E+02 0.0095 25.6 10.0 110 120-235 20-137 (300)
197 1vli_A Spore coat polysacchari 30.8 2E+02 0.0069 27.7 9.0 93 212-315 98-193 (385)
198 2rag_A Dipeptidase; aminohydro 30.8 3E+02 0.01 26.9 10.5 55 359-428 351-406 (417)
199 1rqb_A Transcarboxylase 5S sub 30.4 4.4E+02 0.015 26.7 13.0 123 127-254 119-247 (539)
200 2ehh_A DHDPS, dihydrodipicolin 30.4 3.2E+02 0.011 25.0 12.5 109 194-304 32-151 (294)
201 3dz1_A Dihydrodipicolinate syn 30.2 3.4E+02 0.011 25.2 12.4 111 194-305 40-160 (313)
202 2nuw_A 2-keto-3-deoxygluconate 30.2 3.2E+02 0.011 25.0 12.0 111 120-234 15-129 (288)
203 2hmc_A AGR_L_411P, dihydrodipi 30.1 3.6E+02 0.012 25.5 12.3 112 194-306 58-178 (344)
204 2ojp_A DHDPS, dihydrodipicolin 29.6 3.2E+02 0.011 25.0 10.2 110 194-305 33-153 (292)
205 3eb2_A Putative dihydrodipicol 29.4 2.8E+02 0.0095 25.6 9.7 111 194-305 36-156 (300)
206 3fkr_A L-2-keto-3-deoxyarabona 29.3 3.5E+02 0.012 25.1 12.0 119 184-305 30-162 (309)
207 3cpr_A Dihydrodipicolinate syn 29.0 3.5E+02 0.012 25.0 13.0 110 194-305 48-168 (304)
208 2yxg_A DHDPS, dihydrodipicolin 28.8 3.4E+02 0.012 24.8 12.7 119 184-304 22-151 (289)
209 3qc0_A Sugar isomerase; TIM ba 28.6 2E+02 0.007 25.5 8.7 108 186-315 21-144 (275)
210 3lab_A Putative KDPG (2-keto-3 28.5 2.2E+02 0.0077 24.9 8.2 100 121-242 21-126 (217)
211 1xky_A Dihydrodipicolinate syn 28.4 3.5E+02 0.012 24.9 12.4 110 194-305 44-164 (301)
212 2v9d_A YAGE; dihydrodipicolini 28.3 3.8E+02 0.013 25.3 11.9 109 194-304 63-182 (343)
213 3qfe_A Putative dihydrodipicol 28.0 2.9E+02 0.01 25.7 9.7 115 120-234 27-145 (318)
214 3tr9_A Dihydropteroate synthas 28.0 3E+02 0.01 25.7 9.4 120 183-315 50-201 (314)
215 3daq_A DHDPS, dihydrodipicolin 27.6 3.6E+02 0.012 24.7 11.0 107 123-235 21-135 (292)
216 2r8w_A AGR_C_1641P; APC7498, d 27.3 3.9E+02 0.013 25.0 12.3 111 194-306 66-187 (332)
217 3h5d_A DHDPS, dihydrodipicolin 27.1 3.8E+02 0.013 24.8 11.8 111 194-306 39-161 (311)
218 1p1x_A Deoxyribose-phosphate a 27.1 2.2E+02 0.0074 25.8 8.1 139 120-290 23-170 (260)
219 1f6k_A N-acetylneuraminate lya 26.7 3.7E+02 0.013 24.6 12.5 120 184-305 25-156 (293)
220 3a5f_A Dihydrodipicolinate syn 26.7 3.2E+02 0.011 25.0 9.6 110 194-305 33-153 (291)
221 1o5k_A DHDPS, dihydrodipicolin 26.5 3.9E+02 0.013 24.7 11.7 109 194-304 44-163 (306)
222 3b4u_A Dihydrodipicolinate syn 26.5 3.8E+02 0.013 24.6 11.9 118 185-304 26-158 (294)
223 1w3i_A EDA, 2-keto-3-deoxy glu 26.5 3.8E+02 0.013 24.6 11.5 111 120-234 15-129 (293)
224 2rfg_A Dihydrodipicolinate syn 26.3 3.8E+02 0.013 24.6 11.5 120 184-305 22-152 (297)
225 2vp8_A Dihydropteroate synthas 25.5 3.1E+02 0.011 25.6 9.1 97 182-292 65-169 (318)
226 4dpp_A DHDPS 2, dihydrodipicol 25.5 4.4E+02 0.015 25.1 11.6 109 120-235 75-190 (360)
227 2wkj_A N-acetylneuraminate lya 25.1 4.1E+02 0.014 24.5 12.5 110 194-305 43-164 (303)
228 2isw_A Putative fructose-1,6-b 24.8 3.1E+02 0.011 25.7 8.9 50 185-237 155-213 (323)
229 2h9a_B CO dehydrogenase/acetyl 24.7 4.2E+02 0.015 24.6 14.1 125 184-316 76-210 (310)
230 1f6k_A N-acetylneuraminate lya 24.5 4.1E+02 0.014 24.3 11.2 110 120-235 19-137 (293)
231 2anu_A Hypothetical protein TM 23.7 37 0.0013 30.7 2.4 33 107-143 21-53 (255)
232 4a29_A Engineered retro-aldol 23.4 2.1E+02 0.0072 25.8 7.1 107 194-311 124-230 (258)
233 3o0f_A Putative metal-dependen 22.9 1.2E+02 0.004 28.3 5.6 33 107-143 14-46 (301)
234 3vni_A Xylose isomerase domain 22.8 4.1E+02 0.014 23.7 10.8 87 185-288 19-106 (294)
235 3s5o_A 4-hydroxy-2-oxoglutarat 22.0 4.7E+02 0.016 24.1 12.3 113 194-306 46-169 (307)
236 3fy3_A Hemolysin; beta helix, 21.7 1.3E+02 0.0045 26.7 5.3 50 434-498 94-144 (236)
237 3h5d_A DHDPS, dihydrodipicolin 20.9 5E+02 0.017 24.0 11.5 110 120-235 23-141 (311)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-62 Score=510.73 Aligned_cols=463 Identities=48% Similarity=0.826 Sum_probs=417.1
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|++|+++++..+++|+|+||+|++|++... +.++||++|++|+|||||+|+|+..+..+..+.+++....+.
T Consensus 2 ~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~---~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~a 78 (490)
T 3dc8_A 2 STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS---GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRA 78 (490)
T ss_dssp CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC---CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEEccEEECCCCceeeeEEEECCEEEEeccCCC---CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHHH
Confidence 58999999999988788999999999999998653 578999999999999999999998874444688899999999
Q ss_pred HHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccC
Q 009282 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (538)
++++||||++++....+. ...+.++.+.....+..++++++......+++.+.++.++.++.|+..+|+|+++.+....
T Consensus 79 a~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~~~~~~ 158 (490)
T 3dc8_A 79 ALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGALMV 158 (490)
T ss_dssp HHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCSTTTTBC
T ss_pred HHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCCCCccC
Confidence 999999999998654433 5677777777766677788888887777777778888888767899999999998888888
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.+.++++++.|+++|.++.+|+++...+......+...|...+..|...+|...+.+.+.+++.++...+.++|+.|++
T Consensus 159 ~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvS 238 (490)
T 3dc8_A 159 DDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTS 238 (490)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 99999999999999999999999998877777777888899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCC
Q 009282 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (538)
Q Consensus 293 ~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~ 372 (538)
+....+.++.+++.|+.|++++++|++.++++.+...+|..+..++++||+|...+++.++++++.|...+++|||.|++
T Consensus 239 t~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~ 318 (490)
T 3dc8_A 239 CEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFT 318 (490)
T ss_dssp SHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCC
T ss_pred CHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCC
Confidence 99999999999999999999999999999999887655443578999999999999999999999999999999999999
Q ss_pred hhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCc
Q 009282 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 452 (538)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~ 452 (538)
...+..+.++|..+|+|++|++..++..+..++..+++|++++++++|.|||+++|+++++|+|++|+.|||||||++..
T Consensus 319 ~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~ADlvv~d~~~~ 398 (490)
T 3dc8_A 319 TEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRS 398 (490)
T ss_dssp HHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEEEEEE
T ss_pred HHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCCEEEEecCcc
Confidence 99888777799999999999999999999877888999999999999999999999988899999999999999999999
Q ss_pred eeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCccccccchhh
Q 009282 453 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKA 519 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (538)
+.++.+++.++..++||+|..+.++|..||++|++||++|+++...+.|+++++.+++..+++..++
T Consensus 399 ~~i~~~~~~s~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~ 465 (490)
T 3dc8_A 399 KTISAKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRRDPFPAVSTALSTW 465 (490)
T ss_dssp EECCTTTCSSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSCCHHHHHHHHH
T ss_pred eEechhhccccCCCCcccCcEEeeEEEEEEECCEEEEECCEEcccCCCceeccCCCCcchhHHHHHH
Confidence 9999999999999999999999999999999999999999999988899999999888755544443
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=1.1e-59 Score=489.18 Aligned_cols=454 Identities=44% Similarity=0.719 Sum_probs=402.1
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|++|++++...+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..++.+....+++....+.
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~ 80 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQ-ATDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKA 80 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCC-CSSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCC-CCCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHHH
Confidence 58999999999887788999999999999998653 34689999999999999999999998765555677888888999
Q ss_pred HHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
++++||||++++...... ...+.++...... ....++++++.......++.++++.++.++.|+..+|+++++++.+.
T Consensus 81 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~~~~ 160 (461)
T 3sfw_A 81 AAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKNVLM 160 (461)
T ss_dssp HHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTTTTB
T ss_pred HHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCCCcc
Confidence 999999999998654333 5666666665554 34677888877766667778889999883389999999999887778
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.+.++++.|+++|+++.+|+++...+....+.+...|...+..|...+|...+.+++.+++.++...+.++|+.|+
T Consensus 161 ~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~ 240 (461)
T 3sfw_A 161 ADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHV 240 (461)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 89999999999999999999999999888877777788889888888999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
+....++.++.+++.|+.|+++.++|++++.++.+....+ .+..++++||+|...+++.++++++.|+.++++||+.|+
T Consensus 241 s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~-~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~ 319 (461)
T 3sfw_A 241 SCADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDF-EGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPF 319 (461)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTT-GGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccc-cCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCC
Confidence 9999899999999999999999999999999988765433 247789999999999999999999999999999999999
Q ss_pred Chh-hhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCC
Q 009282 372 NST-QKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 450 (538)
Q Consensus 372 ~~~-~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~ 450 (538)
+.. .+..+.++|..+|+|++|++..+...+++++..+++|++++++++|.|||+++|+++++|+|++|+.|||||+|.+
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad~~~~d~~ 399 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDADIVLFDPT 399 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCCEEEEEEE
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCCEEEEcCC
Confidence 843 3434446899999999999999999998788888899999999999999999999888999999999999999999
Q ss_pred CceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCC
Q 009282 451 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 509 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~ 509 (538)
.++.++.+++.+...++||+|..+.++|..||++|++||++|+++...+.|+++++.++
T Consensus 400 ~~~~~~~~~~~~~~~~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~~ 458 (461)
T 3sfw_A 400 VQRTISVETHHMNVDYNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVKRSTF 458 (461)
T ss_dssp EEEECCTTTCCSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCCC
T ss_pred CCEEEchHHcccccCCCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEecCCCC
Confidence 99999999999999999999999999999999999999999999998878999997764
No 3
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9e-58 Score=481.33 Aligned_cols=473 Identities=52% Similarity=0.879 Sum_probs=404.2
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
.++++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..++.+..+.++++...
T Consensus 7 ~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 86 (521)
T 2ftw_A 7 TGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIGT 86 (521)
T ss_dssp CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCCSSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHHH
Confidence 45799999999998877789999999999999986543445789999999999999999999987644445677888888
Q ss_pred HHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
+.++++||||++++..+.. ....+.++...... ....++++++.....++.+..+++.++.++.|+..+|+++.+++.
T Consensus 87 ~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~~ 166 (521)
T 2ftw_A 87 QAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNS 166 (521)
T ss_dssp HHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTTT
T ss_pred HHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCCC
Confidence 9999999999999865432 24556666555443 235567777776666666667788887766899999999888777
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
...+.+.++++++.|+++|+++.+|+++.......++.+.+.|+.++.+|...+|...+..++.+++.++...+.++++.
T Consensus 167 ~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~ 246 (521)
T 2ftw_A 167 FMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIV 246 (521)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 78899999999999999999999999987666677888899999999999988998888888889999999999999999
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCC-cccHHHHHHHHhcCCceEEeCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~-~~~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
|++.....+.++++++.|+.++++.+++++.++...+...+|..+..++++||+|. ....+.+++++..|...+++||+
T Consensus 247 h~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~ 326 (521)
T 2ftw_A 247 HVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDN 326 (521)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred ecCcHHHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCC
Confidence 99987767889999999999999888888888877665545444456778899998 57788999999999999999999
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
.++....+....++|...|+|++|.+..+...+..++..+++|++++++++|.|||+++|+++++|+|++|+.|||||||
T Consensus 327 ~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ADlvv~d 406 (521)
T 2ftw_A 327 CTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDGDIVIWD 406 (521)
T ss_dssp CCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCEEEEE
T ss_pred CCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcCCEEEEe
Confidence 98887766655568889999999999999998887888888999999999999999999998889999999999999999
Q ss_pred CCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCccccccchhhhHHHh
Q 009282 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKADAKYL 524 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (538)
++..+.++.+++.+...++||+|+...+.|..||++|++||++|+++...+.|++++++++++++.++.+++....
T Consensus 407 ~~~~~~i~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 482 (521)
T 2ftw_A 407 PNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRDKVRN 482 (521)
T ss_dssp EEEEEECCTTTCCCSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCGGGTTHHHHHHHHC
T ss_pred CCCCEEEChHHccccCCCCCcCCCEeeeeEEEEEECCEEEEECCeecccCcCceEecCCCCCchHHHHHHHHhhhc
Confidence 9999999998999999999999999999999999999999999999987778999999998887788776666443
No 4
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=8.5e-57 Score=468.46 Aligned_cols=453 Identities=36% Similarity=0.627 Sum_probs=382.0
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (538)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...+.+..++++++...+.+
T Consensus 2 ~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 81 (458)
T 1gkp_A 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAA 81 (458)
T ss_dssp EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCCTTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHHH
T ss_pred EEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHHH
Confidence 68999999998876789999999999999986543445789999999999999999999987643444677888888889
Q ss_pred HhCCcEEEecccCCCC-CCHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccC
Q 009282 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (538)
Q Consensus 135 l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 212 (538)
+++||||++++..... ....+.++...... .+..++++++......+++..++++++. +.|+..+|++.++++....
T Consensus 82 ~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 160 (458)
T 1gkp_A 82 LMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGV 160 (458)
T ss_dssp HHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHH-HTTCCEEEEEECSTTTTBC
T ss_pred HhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHH-HhCCCEEEEEeccCCCcCC
Confidence 9999999999864422 24556666554433 3456677776655555566677888887 6699999999888776778
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 213 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
+.+.+.++++.|+++++++++|+++........+.+.+.|...+..|...+|...+.+.+.+++.++...+.++++.|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~ 240 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLS 240 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999887777666677788999988889888998888889999999999999999999999
Q ss_pred CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCC
Q 009282 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (538)
Q Consensus 293 ~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~ 372 (538)
.....+.++.+++.|+.|+++.+++++++++..+....+ .+..+++.||+|.....+.+++++++|+.+++|||+.+.+
T Consensus 241 ~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~ 319 (458)
T 1gkp_A 241 CKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGV-EAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFD 319 (458)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHH-HHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCC
T ss_pred CHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhccccc-CCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCC
Confidence 987778899999999999888899988888766532111 1234566789998888999999999999999999999888
Q ss_pred hhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCc
Q 009282 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSS 452 (538)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~ 452 (538)
...+....++|...++|++|.+..+...+++++..+++|++++++++|.|||++||+++++|+|++||.|||||+|.+..
T Consensus 320 ~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 399 (458)
T 1gkp_A 320 TEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADLVVYDPQYR 399 (458)
T ss_dssp HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEETTCC
T ss_pred HHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCEEEEeCCCC
Confidence 76555444678888999999999999888777777779999999999999999999977899999999999999999999
Q ss_pred eeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCC
Q 009282 453 FEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 509 (538)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~ 509 (538)
+.++..++.+...++||++....++|..||++|++||++|+++...+.|++++++++
T Consensus 400 ~~~~~~~~~~~~~~~p~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~ 456 (458)
T 1gkp_A 400 GTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLRREPM 456 (458)
T ss_dssp EECCGGGCCSSSSCCTTTTCEESCEEEEEEETTEEEEETTEECCCTTCCCBCCCCCC
T ss_pred eEEchHHcccccCCCccCCCEEeeEEEEEEECCEEEEECCeeccCCCCceeccCcCC
Confidence 999988888889999999998899999999999999999999987756999987654
No 5
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=7.7e-57 Score=475.61 Aligned_cols=455 Identities=32% Similarity=0.530 Sum_probs=379.1
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-CCCChhhHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFSG 130 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~~~~~~~~~~ 130 (538)
+++++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+.. +..+++++...
T Consensus 2 ~m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~ 81 (559)
T 2fty_A 2 IYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHA 81 (559)
T ss_dssp CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGGGEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHH
T ss_pred CceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHH
Confidence 45789999999998877789999999999999986432234689999999999999999999987631 22367788888
Q ss_pred HHHHHhCCcEEEecccCCC---C-CC-HHHHHHH-HHHHhc-ccceeeeeeeeeecC---Chh---hH-HHHHHHHHHcC
Q 009282 131 QAAALAGGTTMHIDFVIPI---N-GS-LTAGFEA-YEKKAK-NSCMDYGFHMAITKW---DEV---VS-DEMEVMVKEKG 196 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~---~-~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~~~~~~g 196 (538)
.+.++++||||++++.... . .. ..+.+.. ...... ...++++++...... .++ .+ +++.++.++.|
T Consensus 82 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~~~G 161 (559)
T 2fty_A 82 TRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYG 161 (559)
T ss_dssp HHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHHHCC
Confidence 8999999999999987543 2 22 3333300 022222 355666665544333 233 55 67777775669
Q ss_pred CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHH
Q 009282 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276 (538)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l 276 (538)
+..+|+++.+++ ..++.+.++++++.|+++|+++.+|+++...+......+.+.|......|...+|...+.+.+.+++
T Consensus 162 ~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i 240 (559)
T 2fty_A 162 VSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAI 240 (559)
T ss_dssp CCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHH
Confidence 999999998876 6789999999999999999999999988877766666678889988888888899999999999999
Q ss_pred HHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccccc-------------------------C--C
Q 009282 277 RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW-------------------------H--S 329 (538)
Q Consensus 277 ~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~-------------------------~--~ 329 (538)
.++...+.++++.|++.....+.++++++.|+.|+++.+++++.+..+.+. . .
T Consensus 241 ~la~~~g~~vhi~H~s~~~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~ 320 (559)
T 2fty_A 241 TLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDD 320 (559)
T ss_dssp HHHHHTTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTC
T ss_pred HHHHHhCCCEEEEcCCCHHHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccCc
Confidence 999999999999999998877999989999999999999999888766551 0 1
Q ss_pred CcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhh-------------hcCccCcccCCCCCcchhhh
Q 009282 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQK-------------AFGIDDFRKIPNGVNGIEER 396 (538)
Q Consensus 330 ~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~-------------~~~~~~~~~~~~g~~g~~~~ 396 (538)
.| .+..++++||+|...+.+++++++++|+.+++|||+.|++...+ ..+..+|..+|+|++|++..
T Consensus 321 ~~-~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~ 399 (559)
T 2fty_A 321 RF-IGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTR 399 (559)
T ss_dssp TT-GGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTH
T ss_pred cc-cccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHH
Confidence 11 24667899999999999999999999999999999998876642 11225788999999999999
Q ss_pred HHHHHHHhhhcCCC-CHHHHHHHHhHhHHHHcCCCCCCcccccC-CCccEEEEcCCC--------ceeeccCcccCCCCC
Q 009282 397 MHLVWDTMVESGQI-SVTDYVRLTSTECARIFNVYPRKGAILVG-SDADIIIFNPNS--------SFEITARSHHSRLDT 466 (538)
Q Consensus 397 ~~~~~~~~~~~~~l-s~~eal~~aT~~~A~~lg~~~~~GsI~~G-k~ADlvvld~~~--------~~~~~~~~~~~~~~~ 466 (538)
++.++..++..+.+ +++++++++|.|||+++|+++++|+|++| +.|||||||.+. ++.++.+++.+...+
T Consensus 400 l~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~s~~~~ 479 (559)
T 2fty_A 400 MPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITNKLMEHNCDY 479 (559)
T ss_dssp HHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCTGGGTSSCSC
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEchHHhcccCCC
Confidence 99988778877889 99999999999999999997789999999 999999999998 889999999999999
Q ss_pred CccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCC
Q 009282 467 NVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 508 (538)
Q Consensus 467 ~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~ 508 (538)
+||+|..+.++|..||++|++||++|+++...+.|+++++.+
T Consensus 480 sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~ 521 (559)
T 2fty_A 480 TPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGK 521 (559)
T ss_dssp CTTTTCBCSCCEEEEEETTEEEEETTEECGGGCCCCBCCCCC
T ss_pred CCccCCEecceEEEEEECCEEEEECCeeccCCcCCeeecCCc
Confidence 999999888999999999999999999999887899999875
No 6
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-56 Score=474.10 Aligned_cols=470 Identities=49% Similarity=0.863 Sum_probs=394.6
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCc----eEEecCCCeeeccccccccccccccCCCCChhhH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDV----KVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~----~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~ 127 (538)
+++++|+|++|++++...+++|+|+||||++||+....+.+. ++||++|++|+|||||+|+|+..++.+..+++++
T Consensus 26 ~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~ 105 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDF 105 (541)
T ss_dssp -CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCT
T ss_pred cCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHH
Confidence 367999999999987767899999999999999864333233 8999999999999999999998775444567788
Q ss_pred HHHHHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
+...+.++++||||++|+..+.. ....+.++....... ....+++++.....++++..+++.++.++.|...+|+++.
T Consensus 106 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~~ 185 (541)
T 2vr2_A 106 HQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMA 185 (541)
T ss_dssp THHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred HHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEec
Confidence 88889999999999999865432 245566665554432 3556777777666666666778888775579999999998
Q ss_pred eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCC
Q 009282 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (538)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 285 (538)
+++.+.++.+.++++++.|+++++++.+|+++........+.+.+.|+..+.+|...++...+...+.+++.++...+.+
T Consensus 186 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p 265 (541)
T 2vr2_A 186 YKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCP 265 (541)
T ss_dssp STTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCC
Confidence 88777889999999999999999999999988776667788888999999988988888888888889999999999999
Q ss_pred EEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCC-cccHHHHHHHHhcCCceEE
Q 009282 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLV 364 (538)
Q Consensus 286 ~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~-~~~~~~l~~~l~~Gv~~~l 364 (538)
+++.|++.....+.++.+++.|+.++++++++++.++...+....|..+..++++||+|. ....+.++++++.|+..++
T Consensus 266 ~~~~h~ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~ 345 (541)
T 2vr2_A 266 LYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTT 345 (541)
T ss_dssp EEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEE
Confidence 999999987766888889999999998888888877766555444444456788999997 4568889999999999999
Q ss_pred eCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccE
Q 009282 365 GTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADI 444 (538)
Q Consensus 365 gtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADl 444 (538)
+||+.+++...+....+.|...|+|++|.+..+...+..++..+++|++++++++|.|||++||+++++|+|++|+.|||
T Consensus 346 gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~ADl 425 (541)
T 2vr2_A 346 GTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADI 425 (541)
T ss_dssp BCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCCE
T ss_pred EeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCCCE
Confidence 99999988877776667899999999999999988887788888899999999999999999999878999999999999
Q ss_pred EEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCcc-ccccchhhhH
Q 009282 445 IIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNY-LFHGLDKADA 521 (538)
Q Consensus 445 vvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 521 (538)
||||.+..+.++.+.+.+...++||++....++|..||++|++||++|+++...+.|++++++++++ ++.++.+++.
T Consensus 426 vv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 503 (541)
T 2vr2_A 426 VIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRDR 503 (541)
T ss_dssp EEEEEEEEEECCTTTCSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCSCBCCCCSSCHHHHHHHHHHHH
T ss_pred EEEcCCcCeEeCHHHhhcccCCCccCCCEEeeeEEEEEECCEEEEECCeeccCCCCceEecCCCCcchhhhhHHHHHh
Confidence 9999999999998888888999999999999999999999999999999998888999999998764 4555544443
No 7
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=1.4e-56 Score=465.70 Aligned_cols=442 Identities=28% Similarity=0.400 Sum_probs=373.0
Q ss_pred cCcccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 50 QSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
.|+++++|+|++|++++...+++|+|+||||++|++.... ..++||++|++|+|||||+|+|+..+ +....+.+..
T Consensus 20 ~m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~--~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~ 95 (473)
T 3e74_A 20 HMSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYET 95 (473)
T ss_dssp --CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC--EEEEEECTTCEEEECEEEEEECC-----------CHHH
T ss_pred cCcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC--CCcEEECCCCEEecCEEEEecccCCC--CCCcHHHHHH
Confidence 4567899999999999887789999999999999986543 27899999999999999999999887 6677888888
Q ss_pred HHHHHHhCCcEEEeccc-CCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..+.++++||||++++. ...+. ...+.++...+.. ....++++++......+ ..++.++. +.|+..+|+++.+
T Consensus 96 ~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~-~~G~~~~K~~~~~ 171 (473)
T 3e74_A 96 GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELD-EVGVVGFKCFVAT 171 (473)
T ss_dssp HHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHH-HHTCSCEEEEC--
T ss_pred HHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHH-HcCCCEEEEeccc
Confidence 99999999999999997 33332 3445555544444 34677777776554432 45566666 6799999999875
Q ss_pred C-------CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHH
Q 009282 207 K-------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (538)
Q Consensus 207 ~-------~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~ 279 (538)
. +.+..+.+.++++++.|+++|.++.+|+++..............|......|...+|...+...+.+++.++
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la 251 (473)
T 3e74_A 172 CGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLA 251 (473)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHH
Confidence 2 345568899999999999999999999998766555555667788888888999999999999999999999
Q ss_pred HHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC
Q 009282 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (538)
Q Consensus 280 ~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G 359 (538)
.+.+.++|+.|++.....+.++.+++.|+.|+++.++|++.+.++.+.. .+..++++||+|...+++.++++++.|
T Consensus 252 ~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G 327 (473)
T 3e74_A 252 KVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEE----IGTLAKCSPPIRDLENQKGMWEKLFNG 327 (473)
T ss_dssp HHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHH----HCGGGCCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhC----CCCcEEEeCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999989999999999999999999999999887753 246788999999999999999999999
Q ss_pred CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccC
Q 009282 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVG 439 (538)
Q Consensus 360 v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~G 439 (538)
++++++||+.|++...+. .+|..+|+|+++++..++..+.+++..++++++++++++|.|||+++|++ ++|+|++|
T Consensus 328 ~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G 403 (473)
T 3e74_A 328 EIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGRIAPG 403 (473)
T ss_dssp CCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCT-TSSCCSTT
T ss_pred CCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-CCCccCCC
Confidence 999999999999988774 48999999999999999999977888888999999999999999999995 58999999
Q ss_pred CCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE-CCeeeccCCCceEeecCC
Q 009282 440 SDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE-NDELNVVPGSGKYIEMRP 508 (538)
Q Consensus 440 k~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~-~~~~~~~~~~~~~~~~~~ 508 (538)
+.|||||+|++..+.++++++.+...++||+|..+.++|..||++|++||+ +|+++.. ..|+++++..
T Consensus 404 ~~AD~vv~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~v~G~~v~~~~g~~~~~-~~G~~~~~~~ 472 (473)
T 3e74_A 404 KDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVA-PKGQFILKHQ 472 (473)
T ss_dssp SBCCEEEEESSCCEECCGGGCCSSSCCCTTTTCEESCEEEEEEETTEEEEETTTBCCSC-CCCCEECCC-
T ss_pred CccCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEECCEEEEecCCeEccC-CCceeecCCC
Confidence 999999999999999999999999999999999999999999999999999 9999987 5899998763
No 8
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=3e-56 Score=469.10 Aligned_cols=469 Identities=45% Similarity=0.798 Sum_probs=389.2
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~ 131 (538)
+++++|+|++|++++...+++|+|+||||++||+....+.+.++||++|++|+|||||+|+|+.....+..+++++...+
T Consensus 25 ~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 104 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGT 104 (501)
T ss_dssp CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCCSSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCCCCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHH
Confidence 35799999999998876789999999999999986543445789999999999999999999987633334567888888
Q ss_pred HHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhcc-cceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
+.++++||||++++..... ....+.++.......+ ....++++......+.+...++.++.++.|+..+|+++.+...
T Consensus 105 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~~ 184 (501)
T 2vm8_A 105 KAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDR 184 (501)
T ss_dssp HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTTT
T ss_pred HHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCCC
Confidence 9999999999999864432 2445555555444432 4556666655544455556677777756799999998877655
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
...+.+.++++++.|+++|+++.+|+++.....+....+.+.|+..+.+|...+|...+...+.+.+.++...+.++|+.
T Consensus 185 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~ 264 (501)
T 2vm8_A 185 FQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 264 (501)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 66789999999999999999999999987666677778888999999999999999888889999999999999999999
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCc-ccHHHHHHHHhcCCceEEeCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDH 368 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~~~~l~~~l~~Gv~~~lgtD~ 368 (538)
|++.....+.++.+++.|+.++..++++++.++...+....+..+..+++.||+|.. ...+.++++++.|+.+++|||+
T Consensus 265 h~~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~ 344 (501)
T 2vm8_A 265 KVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAH 344 (501)
T ss_dssp EECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred eCCcHHHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecC
Confidence 999887678888889999998877777888777665543322223346677888876 5688899999999999999999
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEc
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFN 448 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld 448 (538)
.+++...++...++|...|.|++|.+..+...+.+++..+++|++++++++|.|||+++|+++++|+|++||.|||||+|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 424 (501)
T 2vm8_A 345 CTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWD 424 (501)
T ss_dssp CCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBCCEEEEE
T ss_pred CCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcCCEEEEc
Confidence 88887777665667888899999999988888877777778999999999999999999998789999999999999999
Q ss_pred CCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc-cccccchhhh
Q 009282 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN-YLFHGLDKAD 520 (538)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 520 (538)
.++.+.++..++.+...++||++....+.|..||++|++||++|+++...+.|+++++.+++ +++.++++++
T Consensus 425 ~~~~~~~~~~~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l~~~~~~~~~~~~~~~~~ 497 (501)
T 2vm8_A 425 PDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARS 497 (501)
T ss_dssp EEEEEECCTTTSSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCHHHHHHHHHHH
T ss_pred CCCCeeeccccccccccCCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCceecCCCCCchHHHHHHHHh
Confidence 99999999888888899999999988889999999999999999999767789999999877 5877777665
No 9
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.9e-54 Score=450.64 Aligned_cols=452 Identities=38% Similarity=0.667 Sum_probs=371.9
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
+++|+|++|++++...+++|+|+||||++|++..+ .+.++||++|++|+|||||+|+|+........++++++...+.
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~--~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 79 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG--PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVA 79 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC--CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC--CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHHH
Confidence 57999999999887678999999999999997543 3578999999999999999999997432222256778888889
Q ss_pred HHhCCcEEEecccCCCC-CCHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 134 ALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
++++||||++++..... ....+.++....... ...++++++......+.+...++.++. +.|+..+|++.++.....
T Consensus 80 ~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~k~~~~~~~~~~ 158 (457)
T 1nfg_A 80 AACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLP-DLGITSFKVFMAYRGMNM 158 (457)
T ss_dssp HHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGG-GGTCCEEEEESSSTTTTB
T ss_pred HHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHH-HcCCCEEEEeeccCCCCC
Confidence 99999999999864322 245666666555543 356677777766666655555565555 679999999887654334
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.+.++++.+++.+.++.+|++.........+.+...|......|...+|...+.+.+.++++++.+.+.++++.|+
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~ 238 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHV 238 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 57888999999999999999999998877767777777888877777888888888899999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
++....+.+..+++.|..++++.++|+++++++.+..... .+..+.+.|+.|.......+++++++|+++++|||+.+.
T Consensus 239 ~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~ 317 (457)
T 1nfg_A 239 TCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSW 317 (457)
T ss_dssp CSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTT-GGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccc-cCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCC
Confidence 9876667787778889889999999999998877653221 345677889888888889999999999999999998877
Q ss_pred Chh-hhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCC
Q 009282 372 NST-QKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPN 450 (538)
Q Consensus 372 ~~~-~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~ 450 (538)
+.. .+..+.++|...++|++|.+..+...+ +++..+++|++++|+++|.|||++||+++++|+|++||.|||||+|.+
T Consensus 318 ~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~-~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~ 396 (457)
T 1nfg_A 318 LFKGHKDRGRNDFRAIPNGAPGVEERLMMVY-QGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDPE 396 (457)
T ss_dssp CTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH-HHHHTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBCCEEEEEEE
T ss_pred ChHHhhhcccCCHhHCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCccCEEEEeCC
Confidence 654 333222478888899999998888877 667777799999999999999999999778999999999999999999
Q ss_pred CceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc
Q 009282 451 SSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 510 (538)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~ 510 (538)
.++.++..++.+...++||+|....++|..||++|++||++|+++...+.|+++++++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 456 (457)
T 1nfg_A 397 AEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKRRKYK 456 (457)
T ss_dssp EEEECCGGGSCSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCCCCSCC
T ss_pred CCEEecHHHccCCCCCCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeCCCCCC
Confidence 999998888999999999999988899999999999999999999987669999987654
No 10
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1e-53 Score=445.31 Aligned_cols=447 Identities=27% Similarity=0.375 Sum_probs=360.6
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC-CCChhhHHHHH
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-~~~~~~~~~~~ 131 (538)
++++|+|++|+++++..+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+... + ..+++++....
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~ 79 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDM--DLKNRYGRFELDS 79 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTCCEEEEEECTTCEEEECEEEEEEECCCG--GGTTTSCCHHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCEEEeeecccCC--CCCCchhHHHHHH
Confidence 46899999999988767899999999999999864333456899999999999999999999865 3 34567777888
Q ss_pred HHHHhCCcEEEeccc-CCCC-CCHHHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCC
Q 009282 132 AAALAGGTTMHIDFV-IPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~ 208 (538)
+.++++||||++++. .... ....+.++...+... .. ++++++.+... +..+++.++. +.|+..+|++++++.
T Consensus 80 ~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~-~~g~~~i~~~~~~~~ 154 (458)
T 1gkr_A 80 ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMH-DAGAVGFKSMMAASV 154 (458)
T ss_dssp HHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHH-HTTCCEEEEESSCSB
T ss_pred HHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHH-HcCCcEEEEeecccC
Confidence 889999999999986 3221 234444544443332 23 55555443322 2355677777 568999999887653
Q ss_pred ---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCC
Q 009282 209 ---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (538)
Q Consensus 209 ---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 285 (538)
.+..+.+.++++++.|+++++++.+|++...........+...|...+..|...++...+.+.+.+++.++...+.+
T Consensus 155 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~ 234 (458)
T 1gkr_A 155 PGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCR 234 (458)
T ss_dssp TTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCE
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 35678999999999999999999999988766555556666788766777887788888888899999999999999
Q ss_pred EEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEe
Q 009282 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVG 365 (538)
Q Consensus 286 ~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lg 365 (538)
+++.|+++....+.+..+++.|+.++++.++++++++++.+.. .+..+++.||+|......++++++++|+++++|
T Consensus 235 ~h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lg 310 (458)
T 1gkr_A 235 LIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAER----IGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLG 310 (458)
T ss_dssp EEECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEEC
T ss_pred EEEEeCCCHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCCceEEE
Confidence 9999999866667777777789888988899988887765532 234567789999888899999999999999999
Q ss_pred CCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEE
Q 009282 366 TDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 445 (538)
Q Consensus 366 tD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlv 445 (538)
||+.+.+...+..+..+++..+.|++|.+..+...+++++..+++|++++|+++|.|||+++|+++++|+|++||.||||
T Consensus 311 tD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlv 390 (458)
T 1gkr_A 311 SDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLL 390 (458)
T ss_dssp CCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEE
T ss_pred eCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcCCEE
Confidence 99988776654322236777788999988888888877777778999999999999999999997789999999999999
Q ss_pred EEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecCCCc
Q 009282 446 IFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 510 (538)
Q Consensus 446 vld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~~~~ 510 (538)
|+|.+.++.++..++.+...++||+|....++|..||++|++||++|+++...+.|+++++++++
T Consensus 391 v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 455 (458)
T 1gkr_A 391 ILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVTRRNYE 455 (458)
T ss_dssp EEESCCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCCC----
T ss_pred EEcCCcceEEcHHHccccCCCCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeecCCcccc
Confidence 99999999999888999999999999988899999999999999999999987679999987665
No 11
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=1e-53 Score=443.40 Aligned_cols=429 Identities=28% Similarity=0.404 Sum_probs=369.0
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecC--CCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~--~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+++++|+|++|+++++..+++|+|+||||++|++ ... +.+.++||++|++|+|||||+|+|+..+ +....+++..
T Consensus 5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~ 81 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSIS-SDDGPAIDGTGLHLFPGMVDVHVHFNEP--GRTEWEGFAS 81 (448)
T ss_dssp CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSC-TTSSCEEECTTCEEEECEEEEEECCCTT--TSGGGCCSHH
T ss_pred cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCcHhHHHH
Confidence 5689999999999887788999999999999998 433 3467899999999999999999999877 5555677888
Q ss_pred HHHHHHhCCcEEEeccc-CCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..+.++++||||++++. ..... ...+.+....+.. ....+++.++......+ .+++.++. +.|+.++|+++++
T Consensus 82 ~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~-~~g~~~~~~~l~~ 157 (448)
T 3hm7_A 82 GSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLH-DGGVIGFKAFMSE 157 (448)
T ss_dssp HHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHH-HTTCSEEEEESSS
T ss_pred HHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHH-HcCCCEEEEeecc
Confidence 88999999999999986 33322 3344444443333 23556777666554433 45566666 5799999999887
Q ss_pred CCC---ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC
Q 009282 207 KGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (538)
Q Consensus 207 ~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 283 (538)
... ...+.+.+++.++.|+++|+++.+|+++........+.+...|......|...+|...+.+.+.+++.+++..+
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g 237 (448)
T 3hm7_A 158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTC 237 (448)
T ss_dssp CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhC
Confidence 543 44589999999999999999999999988776666667778898888888889999999999999999999999
Q ss_pred CCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceE
Q 009282 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQL 363 (538)
Q Consensus 284 ~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~ 363 (538)
.++++.|++....++.++.+++.|+.++++.++|++.+.++.+.. .+..++++||+|...+.+.++++++.|+.++
T Consensus 238 ~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~ 313 (448)
T 3hm7_A 238 CPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAE----IGYLAKCAPPLRERQEVEDLWDGLMAGEIDL 313 (448)
T ss_dssp CCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHH----HCSTTCCSSCCCCHHHHHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcC----CCCeEEEcCCCCCHHHHHHHHHHHhcCCccE
Confidence 999999999999889999999999999999999999998887653 2478899999999999999999999999999
Q ss_pred EeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCcc
Q 009282 364 VGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDAD 443 (538)
Q Consensus 364 lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~AD 443 (538)
++||+.|++...+..+ +|...|+|++|++..+...+..++..+++|++++++++|.|||+++|++++.|+|++|+.||
T Consensus 314 i~tD~~p~~~~~k~~~--~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~Ad 391 (448)
T 3hm7_A 314 ISSDHSPSLPQMKTGK--TIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEAS 391 (448)
T ss_dssp ECCCBCCCCGGGGCCS--STTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBCC
T ss_pred EEeCCCCCCHHHcccC--CHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcCC
Confidence 9999999998877642 48899999999999999999778878889999999999999999999988999999999999
Q ss_pred EEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCe
Q 009282 444 IIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 444 lvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~ 493 (538)
|||+|.+.++.++.+++.+...++||+|..+.++|..||++|++||++++
T Consensus 392 ~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 392 FTLIDLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp EEEEEEEEEEECCGGGCCSSSCCCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred EEEEeCCCCEEEChHhcccccCCCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 99999999999999999999999999999999999999999999999875
No 12
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.3e-53 Score=433.68 Aligned_cols=420 Identities=25% Similarity=0.373 Sum_probs=342.7
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHH
Q 009282 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (538)
Q Consensus 55 ~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 134 (538)
++|+|++|++.....+++|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+..+ +....+++....+.+
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~~~~~~ 79 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAA 79 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCCSSCEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEEeCeEEeeecCCCC--CCCCHHHHHHHHHHH
Confidence 789999999943347899999999999999876545578999999999999999999999876 667788888899999
Q ss_pred HhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc
Q 009282 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (538)
Q Consensus 135 l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~ 211 (538)
+++||||++++....+. ...+.++...+.... +..++..+..... ..++.+.++.++. +.|...+ .+.+.+.
T Consensus 80 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~-~~G~~~~----~~~~~~~ 154 (424)
T 3gri_A 80 ARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALV-KEGAFAF----TDDGVGV 154 (424)
T ss_dssp HHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHH-TTTCCCE----EECSSCC
T ss_pred HhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHH-hcCcEEE----ecCCcCc
Confidence 99999999998654332 334444444433322 3344444433322 1223344566666 5676655 3455667
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.+.+.++++++.|+++|+++.+|+++........ ...|......+...+|...+...+.+.+.++.+.+.++++.|+
T Consensus 155 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~---~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 155 QTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGA---MHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCC---EESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhh---hhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 7899999999999999999999998765321000 0000001112334578888889999999999999999999999
Q ss_pred cCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC
Q 009282 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (538)
Q Consensus 292 ~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~ 371 (538)
++....+.++.+++.|+.++++.++|++.+.++.+.. .+..++++||+|...+++.++++++.|+.++++|||.|+
T Consensus 232 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~ 307 (424)
T 3gri_A 232 STKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPG----NNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPH 307 (424)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhC----cCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 9999999999999999999999999999999887753 247889999999999999999999999999999999999
Q ss_pred ChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
+...+. .+|...|+|++|++..++..+..++..+++|++++++++|.|||+++|+ ++|+|++|+.|||||+|.+.
T Consensus 308 ~~~~k~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~~~d~~~ 382 (424)
T 3gri_A 308 ARDEKA---QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDS 382 (424)
T ss_dssp CHHHHT---SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEEEEESSC
T ss_pred CHHHcc---CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEEEEcCCC
Confidence 998876 3899999999999999999998888888899999999999999999999 58999999999999999999
Q ss_pred ceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCe
Q 009282 452 SFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~ 493 (538)
.+.++.+++.+...++||+|..+.++|..||++|++||++|+
T Consensus 383 ~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 383 EQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp CEECCGGGCSSSCCCCTTTTCEESCEEEEEEETTEEEEEC--
T ss_pred CEEEchhhcccccCCCCcCCCEEeeeEEEEEECCEEEEeCCC
Confidence 999999999999999999999999999999999999999985
No 13
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=7.3e-52 Score=426.95 Aligned_cols=422 Identities=25% Similarity=0.385 Sum_probs=341.5
Q ss_pred cEEEECcEEEcCCC-ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHH
Q 009282 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (538)
Q Consensus 54 ~~~i~n~~vv~~~~-~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~ 132 (538)
+++|+|++|++..+ ..+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+... +....+++....+
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~ 78 (428)
T 3mpg_A 2 NYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-ADNAEVIDVNGKLIAPGLVDVHVHLREP--GGEHKETIETGTL 78 (428)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCC-CTTSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHH
T ss_pred cEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCC-CCCCeEEECCCCEEeeCEEEEeeccCCC--CCCchhHHHHHHH
Confidence 68999999997544 468999999999999998654 3468999999999999999999999876 6667888888899
Q ss_pred HHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 133 ~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
.++++||||++++....+. ...+.++...+... .....+..+..... ...+.+.++.++. ..|...+ .+.+.
T Consensus 79 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~G~~~~----~~~~~ 153 (428)
T 3mpg_A 79 AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLK-ELGAFAF----TDDGV 153 (428)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHH-HTTCCCE----ECTTS
T ss_pred HHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHH-HhCCEEE----ECCCc
Confidence 9999999999998644332 33344443333322 13334433332222 1122344555666 5677665 34455
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
+..+.+.++++++.|+++|+++.+|+++........ ...|......+...+|...+...+.+.+.++...+.++++.
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~---~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~ 230 (428)
T 3mpg_A 154 GVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGC---VHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVC 230 (428)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCS---EETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHH---hhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 667899999999999999999999998764321000 00011111123344778888899999999999999999999
Q ss_pred eccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCC
Q 009282 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (538)
Q Consensus 290 h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~ 369 (538)
|++.....+.++.+++.|+.++++.++|++.+.++.+.. .+..++++||+|...+++.++++++.|+.++++||+.
T Consensus 231 H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~ 306 (428)
T 3mpg_A 231 HVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPS----ADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHA 306 (428)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBC
T ss_pred eCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhC----CCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCC
Confidence 999988889999999999999999999999999887753 3478899999999999999999999999999999999
Q ss_pred CCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcC
Q 009282 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 449 (538)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~ 449 (538)
|++...+.. +|...|+|++|++..++..+..++..+++|++++++++|.|||++||++ .|+|++|+.|||||+|.
T Consensus 307 p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~Ad~~~~d~ 381 (428)
T 3mpg_A 307 PHTAEEKAQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADITIIDL 381 (428)
T ss_dssp CCCTTGGGS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBCCEEEEES
T ss_pred CCCHHHccc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcCCEEEEcC
Confidence 998887764 6899999999999999999987788888999999999999999999994 89999999999999999
Q ss_pred CCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 450 NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
+..+.++.+++.++..++||.|..+.++|.+||++|++||++|+++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~g~~~ 427 (428)
T 3mpg_A 382 EQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKESAL 427 (428)
T ss_dssp SCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEETTEEEEECSCC-
T ss_pred CCCEEEchhhccccCCCCCcCCCEEeeEEEEEEECCEEEEeCCccc
Confidence 9999999999999999999999999999999999999999999875
No 14
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.4e-49 Score=412.46 Aligned_cols=435 Identities=20% Similarity=0.277 Sum_probs=338.0
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecC-CCCC---CCCceEEecCCCeeeccccccccccccccCCCCChhhH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP-NINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~-~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~ 127 (538)
+++++|+|++|++++...+++|+|+||||++|++ .... +.+.++||++|++|+|||||+|+|+..+ +..+.+++
T Consensus 3 ~m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~e~~ 80 (452)
T 2gwn_A 3 AMKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREP--GLTHKATI 80 (452)
T ss_dssp CSEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCH
T ss_pred cccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCC--CCCcHHHH
Confidence 4578999999999876678899999999999987 5432 2356899999999999999999999876 55577888
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~ 205 (538)
....+.++++||||++++....+. ...+.++...+.. ....++++++......+ ..++.++. ..|..++|.++.
T Consensus 81 ~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~g~~g~k~~~~ 156 (452)
T 2gwn_A 81 ASESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVD-KHLVPGLKLFLG 156 (452)
T ss_dssp HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCC-TTSCSCEEEESS
T ss_pred HHHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHH-HcCCCEEEEEec
Confidence 888899999999999998643322 3344444433333 23566777666554432 23444444 457888998876
Q ss_pred eCC--CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHH-HHcCC-CCcccccccCCchHHHHHHHHHHHHHHH
Q 009282 206 YKG--SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM-IELGI-TGPEGHALSRPPLLEGEATTRAIRLAEF 281 (538)
Q Consensus 206 ~~~--~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 281 (538)
+.. .+..+.+.+++.++ +.+..+..|+++...+......+ ...|. ..+..|...+|...+.+.+.++++++.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~ 233 (452)
T 2gwn_A 157 SSTGNMLVDNKETLEKIFG---ECDLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAER 233 (452)
T ss_dssp SCCGGGBCCCHHHHHHHHH---HCCSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCHHHHHHHHH---HcCCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHH
Confidence 531 12235666665554 44888899998765555444333 44554 4445566667888888999999999999
Q ss_pred cCCCEEEEeccCHHHHHHHHH---HHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc
Q 009282 282 VNTPLYVVHVMSMDAMEEIAK---ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT 358 (538)
Q Consensus 282 ~~~~~~~~h~~~~~~~~~i~~---~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~ 358 (538)
.+.++++.|++.....+.+.. +++. +|+++.++|+++++++.+.. .+..+...|+++......++++++++
T Consensus 234 ~g~~v~i~H~~~~~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~----~g~~~~~~P~lr~~~~~~~l~~~l~~ 307 (452)
T 2gwn_A 234 MNARLHILHLSTEKELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGR----LGNRIKWNPAIKKESDREALRAAVRN 307 (452)
T ss_dssp HTCCEEECCCCCTGGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCCCHHHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHHC
Confidence 999999999986544344333 1222 57888888999998877643 34677788998888888999999999
Q ss_pred CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCccccc
Q 009282 359 GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILV 438 (538)
Q Consensus 359 Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~ 438 (538)
|+++++|||+.+.+...+. .+|..+|+|+++++..+...+. .+..+++|++++++++|.|||+++|++ ++|+|++
T Consensus 308 Gv~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~~~~~~~-~~~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~ 382 (452)
T 2gwn_A 308 GRIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHSLLALLE-LCNQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRP 382 (452)
T ss_dssp SSSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCT
T ss_pred CCceEEEeCCCCCChHHhc---CChhhCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccC
Confidence 9999999999888766443 3788899999999988887775 555667999999999999999999996 7999999
Q ss_pred CCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeec
Q 009282 439 GSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM 506 (538)
Q Consensus 439 Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~ 506 (538)
||.|||||+|.++++.++.+++.+...++||+|..+.++|..||++|++||++|+++...+.|+++++
T Consensus 383 G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 450 (452)
T 2gwn_A 383 GYYADLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPLFF 450 (452)
T ss_dssp TSBCCEEEEETTSCEECCTTTCCSTTCCCTTTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBCCB
T ss_pred CCcCCEEEEcCCCCeEECHHHccccCCCCCCCCcEEeeeEEEEEECCEEEEECCeeccCCCCceeeCC
Confidence 99999999999999999988899999999999998889999999999999999999987678999975
No 15
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=5.5e-47 Score=390.73 Aligned_cols=411 Identities=24% Similarity=0.355 Sum_probs=312.8
Q ss_pred EEEECcEEEcCCC-ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHH
Q 009282 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (538)
Q Consensus 55 ~~i~n~~vv~~~~-~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 133 (538)
++|+|++|+++++ ..+++|+|+||||++|++. ++.++||++|++|+|||||+|+|+... +....+++....+.
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~ 75 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG----EAKQVVDGTGCFLAPGFLDLHAHLREP--GEEVKEDLFSGLLA 75 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC----CCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC----CCceEEeCCCCEEecCEEEeccccCCC--CCCchHHHHHHHHH
Confidence 6899999999875 3689999999999999875 246899999999999999999999875 44456777888899
Q ss_pred HHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeeeCCCc
Q 009282 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (538)
Q Consensus 134 ~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~ 210 (538)
++++||||++++...... ...+.++...+.... +.+++........ ...+...++.++. +.|...++ .++.+
T Consensus 76 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~i~----~~~~~ 150 (426)
T 2z00_A 76 AVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLR-EAGAVLLT----DDGRT 150 (426)
T ss_dssp HHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHH-HHTCCEEE----CTTSC
T ss_pred HHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHH-HcCCEEEE----CCCcC
Confidence 999999999998643221 222333333322222 1123222221111 1112234455555 35776664 23445
Q ss_pred cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHH----HHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHH-----
Q 009282 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ----KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF----- 281 (538)
Q Consensus 211 ~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~----- 281 (538)
..+.+.++++++.|+++|+++.+|+.+........ ......|. ..+|...+...+.++++++..
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~g~~~~~~g~-------~~~~~~~e~~~~~~~~~~a~~~~~~~ 223 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMNDGPLADLLGL-------PGNPPEAEAARIARDLEVLRYALRRS 223 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEECSHHHHHHTC-------CEECHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhccCccchhccc-------ccCChHHHHHHHHHHHHHHhhccccc
Confidence 67899999999999999999999998764321000 00111222 224555566677788888887
Q ss_pred -cCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC
Q 009282 282 -VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI 360 (538)
Q Consensus 282 -~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv 360 (538)
.+.++++.|++.....+.++++++.|+.|+++.+++++.+..+.+.. .+..++..||++...++..++++++.|+
T Consensus 224 ~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~~plr~~~~~~~l~~~l~~G~ 299 (426)
T 2z00_A 224 PATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRT----FDPLFKVAPPLRGEEDREALLEGLLDGT 299 (426)
T ss_dssp SSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGG----CCGGGCCSSCCCCHHHHHHHHHHHHHTS
T ss_pred cCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhc----cCceEEEeCCCCCHHHHHHHHHHHhCCC
Confidence 79999999999877678899999999999999999888776655432 2345667889998888889999999999
Q ss_pred ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCC
Q 009282 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGS 440 (538)
Q Consensus 361 ~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk 440 (538)
.+++|||+.|.+...+. ++|...|.|+.+.+..+...+..++..+++|++++++++|.|||+++|++ +|+|++||
T Consensus 300 ~~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~ 374 (426)
T 2z00_A 300 LDAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGA 374 (426)
T ss_dssp SCEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTS
T ss_pred cEEEecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCC
Confidence 99999998887766543 47888899999888888877766666777999999999999999999994 89999999
Q ss_pred CccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCe
Q 009282 441 DADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 441 ~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~ 493 (538)
.|||||+|. .++.++++++.++..++||+|....++|..||++|++||++++
T Consensus 375 ~ADlvv~d~-~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 375 EASLVLLSP-KERPVDPSAFASKARYSPWAGWVLGGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp BCCEEEEEC-CCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEECCC
T ss_pred CCCEEEEeC-CcEEEcHHHccccCCCCCcCCCEEEEEEEEEEECCEEEEecCC
Confidence 999999998 7788888889898999999999888999999999999999875
No 16
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=1.3e-46 Score=391.96 Aligned_cols=417 Identities=24% Similarity=0.324 Sum_probs=285.3
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+++++|+|++|++++. ..+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+... +....+++..
T Consensus 46 mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~ 122 (467)
T 1xrt_A 46 MLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPGFIDIHVHLRDP--GQTYKEDIES 122 (467)
T ss_dssp CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-CSSEEEEECTTSEEEECEEEEEECCCTT--TCTTTCCHHH
T ss_pred eeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEccCEEEEeecccCC--CCCchhhHHH
Confidence 5578999999998765 368899999999999997543 3456899999999999999999999765 4445677778
Q ss_pred HHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeec-CChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
..+.++++||||++++...... ...+.++...+.... +.+++........ ...+...++.++. +.|+..++ .
T Consensus 123 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~-~~g~~~i~----~ 197 (467)
T 1xrt_A 123 GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLK-EAGCVAFT----D 197 (467)
T ss_dssp HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHH-HHTCCCBC----C
T ss_pred HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHH-HcCCEEEE----c
Confidence 8889999999999998643221 223333333332221 2233322221111 1112233445555 34655442 3
Q ss_pred CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
.+....+.+.++++++.|+++|+++.+|+++.......+ ..|......+....+...+...+.+.+.++...+.++
T Consensus 198 ~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~ 273 (467)
T 1xrt_A 198 DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI----NEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHV 273 (467)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC------------------------CHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH----hcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCE
Confidence 344567899999999999999999999997754322111 1121111111222344455566677777888889999
Q ss_pred EEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 287 ~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
++.|++.....+.++++++.|+.++++.+++++.+..+.+.. .+..+++.||+|......++++++++|+++++||
T Consensus 274 hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgT 349 (467)
T 1xrt_A 274 HIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLN----SGANARVNPPLRKKEDRLALIEGVKRGIIDCFAT 349 (467)
T ss_dssp EESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC--------------------------CCHHHHHHHHHHTCSCEECC
T ss_pred EEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCceEEEee
Confidence 999999887668888899999999988888887766554321 1245567788888888999999999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEE
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIII 446 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvv 446 (538)
|+.+.+...+ +.|...+.|+.+.+..+...++ +++.+.+|++++|+++|.|||++||++ +|+|++||.|||||
T Consensus 350 D~~~~~~~~~----~~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvv 422 (467)
T 1xrt_A 350 DHAPHQTFEK----ELVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITI 422 (467)
T ss_dssp CBCCCCC---------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEE
T ss_pred CCCCCChhHh----cccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEE
Confidence 9987765433 2467788999998888777775 666666999999999999999999994 89999999999999
Q ss_pred EcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 447 FNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 447 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
+|.++.+.++++++.+...++||++....++|..||++|++||++
T Consensus 423 ld~~~~~~i~~~~~~~~~~~~p~~g~~~~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 423 FDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp EEEEEEEECSTTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred EeCCCCEEEChHHccCcCCCCCccCCEEeEEEEEEEECCEEEecC
Confidence 999998899888888888899999998888999999999999985
No 17
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=2e-41 Score=351.29 Aligned_cols=380 Identities=18% Similarity=0.240 Sum_probs=259.0
Q ss_pred cCcccEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCC--CCCceEEecCCCeeeccccccccccccccC-C--
Q 009282 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~--~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~-- 120 (538)
.|+++++|+|++|+++++ .++++|+|+||||++||+.... .++.++||++|++|+|||||+|+|+..... +
T Consensus 3 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 82 (447)
T 4f0r_A 3 QSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA 82 (447)
T ss_dssp --CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTTSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CCcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccccCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence 357789999999998764 2689999999999999985432 246789999999999999999999965421 1
Q ss_pred -------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee
Q 009282 121 -------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (538)
Q Consensus 121 -------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (538)
..+++++.. ....++++||||++|+... .....+...+.+.+..+..+.....
T Consensus 83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~~~~~ 158 (447)
T 4f0r_A 83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY----NAAVARAGLASGMRTFVGCSILEFP 158 (447)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhcCCC
Confidence 123333332 3445788999999998432 2344445555554444433332111
Q ss_pred e---cCChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcC
Q 009282 178 T---KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELG 252 (538)
Q Consensus 178 ~---~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g 252 (538)
. ...++.++...++.+. .+...+++...++..+..+.+.++++++.|+++|+++++|+.+. ..+...++ ..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~---~~g 235 (447)
T 4f0r_A 159 TNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK---EHG 235 (447)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHS
T ss_pred cccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH---HcC
Confidence 1 1223445555555532 36677888888888788899999999999999999999999654 33333322 223
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcc
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (538)
... ++ .+......+.+..+.|+...+. +.++++++.|+.++.+|.. ++.
T Consensus 236 ~~~----------------i~-~~~~~g~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~~p~~-------------~~~ 284 (447)
T 4f0r_A 236 QRP----------------LA-RLQRLGLLSPRLVAAHMVHLND-AEVELAARHGLSTAHNPAS-------------NMK 284 (447)
T ss_dssp SCH----------------HH-HHHHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHH-------------HHH
T ss_pred CCH----------------HH-HHHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEECchh-------------hhh
Confidence 211 11 1222334567888999998876 8899999999998888764 111
Q ss_pred cccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCC
Q 009282 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQI 410 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~l 410 (538)
.+... .+++.+++.|+++++|||+.+.+....+ +. +........+.. ...++
T Consensus 285 ~~~~~------------~~~~~~~~~Gv~v~lgTD~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~l 338 (447)
T 4f0r_A 285 LASGI------------SPVSKLMDAGVAVGIGTDGAASNNKLDM-----LA---------ETRLAALLAKVGTLDPTSV 338 (447)
T ss_dssp TTCCC------------CCHHHHHHTTCEEEECCCCGGGTCCCCH-----HH---------HHHHHHHHHHHHHTCTTSS
T ss_pred cCCCC------------CcHHHHHHCCCcEEEeCCCCcCCCCCCH-----HH---------HHHHHHHHhhhhccCCCCC
Confidence 11111 1278899999999999998755322111 11 222222222222 24579
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 411 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 411 s~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
|++++|+++|.|||+++|+++++|+|++||.|||||||.++++..+..+.. ....+... ..+|..||++|++||+
T Consensus 339 ~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~---~~~~~~~~--~~~v~~v~v~G~~v~~ 413 (447)
T 4f0r_A 339 PAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPI---SHVVYAAG--REQVSHVWVKGRALMR 413 (447)
T ss_dssp CHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHH---HHHHHTCC--GGGEEEEEETTEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCCcChH---HHheecCC--CCCceEEEECCEEEEE
Confidence 999999999999999999988899999999999999999887655422111 11112221 3579999999999999
Q ss_pred CCeeeccC
Q 009282 491 NDELNVVP 498 (538)
Q Consensus 491 ~~~~~~~~ 498 (538)
+|++++.|
T Consensus 414 ~g~~~~~d 421 (447)
T 4f0r_A 414 ERKLTTLD 421 (447)
T ss_dssp TTEESSSC
T ss_pred CCeECcCC
Confidence 99999987
No 18
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=1.4e-40 Score=347.03 Aligned_cols=380 Identities=19% Similarity=0.198 Sum_probs=256.5
Q ss_pred cCcccEEEECcEEEcCCC----------ceeeeEEEeCCEEEEecCCCC-CCCCceEEecCCCeeecccccccccccccc
Q 009282 50 QSSSKILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~----------~~~~~V~I~~grI~~Vg~~~~-~~~~~~vID~~G~~v~PGlID~H~H~~~~~ 118 (538)
.++++++|+|++|+++++ .++++|+|+||||++||+... .+.+.++||++|++|+|||||+|+|+....
T Consensus 20 ~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 99 (468)
T 3lnp_A 20 KAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLMPGWVNAHGHAAMSL 99 (468)
T ss_dssp -CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTCCCCEEEEEECCSEEEEECEEECSCCGGGGG
T ss_pred CccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccccCCCCeEEeCCCcEEEeCeechhhChhhhh
Confidence 346789999999998753 258999999999999998654 345689999999999999999999996542
Q ss_pred C-C---------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeee
Q 009282 119 M-G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYG 172 (538)
Q Consensus 119 ~-~---------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (538)
. + ..++++++. ....++++||||++|+... .....+...+.+.+..+..+
T Consensus 100 ~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~ 175 (468)
T 3lnp_A 100 FRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY----PQQSGEAALAAGIRAVCFAP 175 (468)
T ss_dssp GTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC----HHHHHHHHHHHTCEEEEEEE
T ss_pred hccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEecc
Confidence 1 1 123333332 3445689999999998432 23344444555544444333
Q ss_pred eeeeee---cCChhhHHHHHHHHHH-cCCc-----EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHH
Q 009282 173 FHMAIT---KWDEVVSDEMEVMVKE-KGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVF 242 (538)
Q Consensus 173 ~~~~~~---~~~~~~~~~~~~~~~~-~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~ 242 (538)
...... ...++.++...++.+. .+.. .+++...+++.+.++.+.++++++.|+++|+++++|+.+. ..+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~ 255 (468)
T 3lnp_A 176 VLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVS 255 (468)
T ss_dssp ECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHH
T ss_pred ccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHH
Confidence 321111 1123344444444422 2444 6777778888888899999999999999999999999654 3333
Q ss_pred HHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccC
Q 009282 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (538)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~ 322 (538)
..++ ..|... ++ .+......+.++.+.|+...+. +.++++++.|+.++.||...
T Consensus 256 ~~~~---~~g~~~----------------i~-~~~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~p~s~----- 309 (468)
T 3lnp_A 256 ESLE---TFNKRP----------------TQ-RLADIGFLNERVSCVHMTQVDD-GDIKILQKTGASIIHCPESN----- 309 (468)
T ss_dssp HHHH---HHSSCH----------------HH-HHHHTTCCSTTEEEEECCSCCH-HHHHHHHHHCCEEEECHHHH-----
T ss_pred HHHH---HhCCCH----------------HH-HHHHcCCCCCCeEEEeccCCCH-HHHHHHHhcCCEEEEChhhh-----
Confidence 3222 233211 11 1122233567889999998876 88999999999998887642
Q ss_pred cccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHH
Q 009282 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWD 402 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~ 402 (538)
+..+... .+++.+++.|+++++|||+...+....+ +. +..+...+.
T Consensus 310 --------~~~~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~~~~~~ 355 (468)
T 3lnp_A 310 --------LKLASGF------------CPIAKLSAANIPLAIGTDGAASNNDLDM-----FS---------ETKTAALLA 355 (468)
T ss_dssp --------HHTTCCC------------CCHHHHHHTTCCEEECCCCTTSSCCCCH-----HH---------HHHHHHHHH
T ss_pred --------hhcCCCC------------CCHHHHHHCCCeEEEECCCCcCCCCCCH-----HH---------HHHHHHHHh
Confidence 1111111 1278899999999999998755322111 11 222222222
Q ss_pred Hhh--hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEE
Q 009282 403 TMV--ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 480 (538)
Q Consensus 403 ~~~--~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (538)
+.. ...++|++++|+++|.|||+++|+++++|+|++||.|||||||.++++..+..+..+ ...|... ..+|..
T Consensus 356 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~---~~~~~~~--~~~v~~ 430 (468)
T 3lnp_A 356 KGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVS---HMVYCTK--STQVSH 430 (468)
T ss_dssp HHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHH---HHHHSCC--GGGEEE
T ss_pred hhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCccCHHH---HhhccCC--CCCceE
Confidence 222 256799999999999999999999888999999999999999999876554321110 1112111 368999
Q ss_pred EEECCEEEEECCeeeccC
Q 009282 481 TIAGGRVVWENDELNVVP 498 (538)
Q Consensus 481 V~v~G~~V~~~~~~~~~~ 498 (538)
||++|++||++|++++.|
T Consensus 431 v~v~G~~v~~~g~~~~~d 448 (468)
T 3lnp_A 431 VWVNGRCLLKNGELTTLN 448 (468)
T ss_dssp EEETTEEEEETTEESSSC
T ss_pred EEECCEEEEECCeECCCC
Confidence 999999999999999987
No 19
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=6.4e-41 Score=350.65 Aligned_cols=379 Identities=18% Similarity=0.253 Sum_probs=254.4
Q ss_pred cccEEEECcEEE-cCCC----ceeeeEEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccCCC----
Q 009282 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---- 121 (538)
Q Consensus 52 ~~~~~i~n~~vv-~~~~----~~~~~V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~~~---- 121 (538)
|++++|+|++++ ++++ .++++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+.......
T Consensus 28 m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~~~~ 107 (479)
T 3h4u_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred hhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccCCCCCeEEeCCCCEEecceeecccccchhhhcccccc
Confidence 678999999965 4442 26899999999999999865443 5689999999999999999999998763210
Q ss_pred ------------------CChhhHHH----HHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceeeeeeee-
Q 009282 122 ------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMA- 176 (538)
Q Consensus 122 ------------------~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (538)
.++++++. ....++++||||++++...... .....++...+.+.+.....+....
T Consensus 108 ~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~ 187 (479)
T 3h4u_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEEeeecccc
Confidence 23333332 3455688999999998533222 4555666666666654433322111
Q ss_pred ----------eecCChhhHHHHHHHHHHc-C---CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChh-hH
Q 009282 177 ----------ITKWDEVVSDEMEVMVKEK-G---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AV 241 (538)
Q Consensus 177 ----------~~~~~~~~~~~~~~~~~~~-g---~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~-~~ 241 (538)
.....++.+++..++.+.. + ...++....++..+.++.+.++++++.|+++|+++++|+.+.. +.
T Consensus 188 ~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~ 267 (479)
T 3h4u_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDI 267 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHH
T ss_pred cccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHH
Confidence 0011234455555555332 2 3456777777777888999999999999999999999995543 33
Q ss_pred HHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccccccc
Q 009282 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (538)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~ 321 (538)
...++. .|.. ..+.+......+.++.+.|+...+. +.++.+++.|+.++.||...
T Consensus 268 ~~~~~~---~g~~-----------------~~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~v~~~p~s~---- 322 (479)
T 3h4u_A 268 AYSREK---FGMT-----------------PAEYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVAHCPCSN---- 322 (479)
T ss_dssp HC----------C-----------------HHHHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHHH----
T ss_pred HHHHHH---cCCC-----------------HHHHHHHcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEEChhHh----
Confidence 322211 1111 0111222234456888999998877 88999999999999887752
Q ss_pred CcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHH
Q 009282 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~ 401 (538)
+..+... +| ++.+++.|+++++|||+.+.+....+ +. ++......
T Consensus 323 ---------~~l~~~~---~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~~~~~ 367 (479)
T 3h4u_A 323 ---------MRLASGI---AP---------VKKMRLAGVPVGLGVDGSASNDGAQM-----VA---------EVRQALLL 367 (479)
T ss_dssp ---------HHTTCCC---CC---------HHHHHHTTCCEEECCCCTTSSCCCCH-----HH---------HHHHHHHH
T ss_pred ---------hhcCCCC---CC---------HHHHHHCCCeEEEeCCCCccCCCcCH-----HH---------HHHHHHHH
Confidence 2221111 12 78999999999999997754322111 11 22222222
Q ss_pred HHhh-hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEE--eeEE
Q 009282 402 DTMV-ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV--KGKV 478 (538)
Q Consensus 402 ~~~~-~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v 478 (538)
.... ....+|++++|+++|.|||+++|+++ +|+|++||.|||||||.+++...+. .+.|+++... ..+|
T Consensus 368 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~-------~~~~~~~~~~~~~~~v 439 (479)
T 3h4u_A 368 QRVGFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGA-------LHDPVAALVFCAPSQT 439 (479)
T ss_dssp HHHHHCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTC-------TTSHHHHHHHSSCCCC
T ss_pred hcccCCCCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCccCCc-------ccCHHHHHHccCCCCc
Confidence 2221 23349999999999999999999976 9999999999999999887755431 1234443322 4589
Q ss_pred EEEEECCEEEEECCeeeccC
Q 009282 479 EVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 479 ~~V~v~G~~V~~~~~~~~~~ 498 (538)
..||++|++||++|++++.|
T Consensus 440 ~~v~v~G~~v~~~g~~~~~d 459 (479)
T 3h4u_A 440 AYTVVNGKVVVREGRLATLD 459 (479)
T ss_dssp SEEEETTEEEEETTEECSSC
T ss_pred CEEEECCEEEEECCEECCCC
Confidence 99999999999999999987
No 20
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9.6e-41 Score=346.64 Aligned_cols=382 Identities=16% Similarity=0.192 Sum_probs=259.0
Q ss_pred cCcccEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCC--CCCCceEEecCCCeeeccccccccccccccCC---
Q 009282 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG--- 120 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~--~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~--- 120 (538)
.++++++|+|++|+++++ .++++|+|+||||++||+... .+++.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~ 84 (451)
T 4dyk_A 5 RNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLA 84 (451)
T ss_dssp -CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSS
T ss_pred cchhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccccCCCCeEEeCCCCEEeecccchhhChhhHHhccCC
Confidence 446789999999999663 268999999999999997542 23468999999999999999999999655221
Q ss_pred -------------------CCChhhHHHHH----HHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee
Q 009282 121 -------------------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (538)
Q Consensus 121 -------------------~~~~~~~~~~~----~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (538)
..++++++... ..++++||||++|+... .....+...+.+.+..+..+.....
T Consensus 85 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~ 160 (451)
T 4dyk_A 85 DDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY----PQAICGVVHDSGVRAQVAIPVLDFP 160 (451)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhhCCC
Confidence 12344444333 34569999999998432 2334444455554444333322111
Q ss_pred e---cCChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcC
Q 009282 178 T---KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELG 252 (538)
Q Consensus 178 ~---~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g 252 (538)
. ...++.+++..++.+. .+...+++...++..+.++.+.++++++.|+++|+++++|+.+. ..+...++ ..|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~g 237 (451)
T 4dyk_A 161 IPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAME---RNG 237 (451)
T ss_dssp BTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHS
T ss_pred CccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhC
Confidence 1 1123444555555433 36677888888888888899999999999999999999999554 33333322 223
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcc
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 332 (538)
... ++ .+......+.++.+.|+...+. +.++++++.|+.++.||... +.
T Consensus 238 ~~~----------------i~-~~~~~g~~~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~~p~s~-------------~~ 286 (451)
T 4dyk_A 238 ERP----------------LA-RLHRLGLLGPRFQAVHMTQVDN-DDLAMLVETNSSVIHCPESN-------------LK 286 (451)
T ss_dssp SCH----------------HH-HHHHTTCCSTTEEEEECCCCCH-HHHHHHHHHTCEEEECHHHH-------------HH
T ss_pred CCH----------------HH-HHHHCCCCCCCeEEEECCCCCH-HHHHHHHHcCCEEEEChhhh-------------hh
Confidence 210 11 1122233567888999998877 88999999999998887642 11
Q ss_pred cccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCC
Q 009282 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQI 410 (538)
Q Consensus 333 ~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~l 410 (538)
.+... +| ++.+++.|+++++|||+.+.+....+ +. +........+.. ...++
T Consensus 287 ~~~~~---~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~ 340 (451)
T 4dyk_A 287 LASGF---CP---------VEKLWQAGVNVAIGTDGAASNNDLDL-----LG---------ETRTAALLAKAVYGQATAL 340 (451)
T ss_dssp TTCCC---CC---------HHHHHHHTCCEEECCCCGGGSSCCCH-----HH---------HHHHHHHHHHHHHTCTTSS
T ss_pred ccCCc---cc---------HHHHHhCCCeEEEECCCCccCCCCCH-----HH---------HHHHHHHHhhhhcCCCCCC
Confidence 11111 12 78899999999999998754322111 11 222222222222 24579
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE---EeeEEEEEEECCEE
Q 009282 411 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR---VKGKVEVTIAGGRV 487 (538)
Q Consensus 411 s~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~V~v~G~~ 487 (538)
|++++|+++|.|||+++|+++++|+|++||.|||||||.+++...+. ..|+.... ...+|..||++|++
T Consensus 341 ~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~v~G~~ 412 (451)
T 4dyk_A 341 DAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPV--------YDPVSQLIYASGRDCVRHVWVGGRQ 412 (451)
T ss_dssp CHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------SCHHHHHHHHCCGGGEEEEEETTEE
T ss_pred CHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCCC--------CCHHHHhhccCCCCCccEEEECCEE
Confidence 99999999999999999998889999999999999999987654332 12222210 13579999999999
Q ss_pred EEECCeeeccCCCceEe
Q 009282 488 VWENDELNVVPGSGKYI 504 (538)
Q Consensus 488 V~~~~~~~~~~~~~~~~ 504 (538)
||++|++++.| .++.+
T Consensus 413 v~~~g~~~~~d-~~~~~ 428 (451)
T 4dyk_A 413 LLDDGRLLRHD-EQRLI 428 (451)
T ss_dssp EEETTEESSSC-HHHHH
T ss_pred EEECCEECcCC-HHHHH
Confidence 99999999987 44443
No 21
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.7e-40 Score=346.34 Aligned_cols=378 Identities=19% Similarity=0.219 Sum_probs=255.6
Q ss_pred cccEEEECcEEEcCCC----ceeeeEEEeCCEEEEecCCCCCC---CCceEEecCCCeeeccccccccccccccCC----
Q 009282 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMG---- 120 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~---- 120 (538)
+++++|+|++|+++++ .++++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+......
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 92 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVAD 92 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccC
Confidence 4789999999998763 36899999999999999854332 357899999999999999999999775211
Q ss_pred ------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-
Q 009282 121 ------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI- 177 (538)
Q Consensus 121 ------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (538)
..++++++. ....++++||||++|+... .....+...+.+.+..+..+.....
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~~ 168 (472)
T 4dzh_A 93 DLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFF----ADVQAAVYKQHGFRALVGAVIIDFPT 168 (472)
T ss_dssp SCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHTTCEEEEEEEECSSCC
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHhCCeEEEEecccCCCc
Confidence 123333332 2344789999999998622 2334444455554444433332111
Q ss_pred --ecCChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCC
Q 009282 178 --TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGI 253 (538)
Q Consensus 178 --~~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~ 253 (538)
....++.+++..++.+. .+...+++...++..+.++.+.++++++.|+++|+++++|+.+. .+....++ ..|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~---~~g~ 245 (472)
T 4dzh_A 169 AWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVA---QYGQ 245 (472)
T ss_dssp SSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHSS
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH---HhCC
Confidence 11123445555555433 35667788888888888899999999999999999999999543 33333322 2232
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCccc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 333 (538)
. .+. .+......+.++.+.|+...+. +.++++++.|+.++.||... +..
T Consensus 246 ~----------------~i~-~~~~~g~~~~~~~~~H~~~l~~-~~i~~l~~~g~~v~~~p~s~-------------~~~ 294 (472)
T 4dzh_A 246 R----------------PLA-RLDRLGLVNDRLIAVHMTQLTE-AEIHLCAERGVSVVHCPESN-------------LKL 294 (472)
T ss_dssp C----------------HHH-HHHHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHHH-------------HHT
T ss_pred C----------------HHH-HHHHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCEEEEChHHH-------------Hhc
Confidence 1 111 1222334567888999998877 88999999999998887642 111
Q ss_pred ccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh--hcCCCC
Q 009282 334 AAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQIS 411 (538)
Q Consensus 334 ~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~--~~~~ls 411 (538)
+.+. .+++.++++|+++++|||+...+....+ +. +......+.+.. ...++|
T Consensus 295 ~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~a~~~~~~~~~~~~~l~ 348 (472)
T 4dzh_A 295 ASGF------------CPACALQRASVNLAIGTDGCASNNDLDM-----FS---------ENRTAAILAKAVANDATALD 348 (472)
T ss_dssp TCCC------------CCHHHHHHTTCEEEECCCCTTSSCCCCH-----HH---------HHHHHHHHHHHHHTCTTSSC
T ss_pred CCCC------------ccHHHHHHCCCCEEEECCCCcCCCCCCH-----HH---------HHHHHHHHhhhhcCCCCcCC
Confidence 1111 1278899999999999998654322111 11 222222222221 345799
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 412 VTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 412 ~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++++|+++|.|||+++|+++++|+|++||.|||||+|.+++...+..+ +.....|.+. ..+|..||++|++||++
T Consensus 349 ~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~---~~~~l~~~~~--~~~V~~v~v~G~~v~~~ 423 (472)
T 4dzh_A 349 AATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPLHH---VLSQLIYAAG--RHQVTDVWIAGKPKLVQ 423 (472)
T ss_dssp HHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSC---HHHHHHHTCC--GGGEEEEEETTEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCCccC---HHHHHhhcCC--CCCceEEEECCEEEEEC
Confidence 999999999999999999888999999999999999998775433211 0001112211 35799999999999999
Q ss_pred CeeeccC
Q 009282 492 DELNVVP 498 (538)
Q Consensus 492 ~~~~~~~ 498 (538)
|++++.|
T Consensus 424 g~~~~~d 430 (472)
T 4dzh_A 424 RELIDMD 430 (472)
T ss_dssp TEETTCC
T ss_pred CEECcCC
Confidence 9999987
No 22
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=1.8e-40 Score=339.46 Aligned_cols=351 Identities=16% Similarity=0.152 Sum_probs=235.4
Q ss_pred cEEEECcEEEcCCCc---eeeeEEEeCCEEEEecCCC-CCCCCceEEecCCCeeeccccccccccccccCCC------CC
Q 009282 54 KILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNI-NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------ET 123 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~-~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~------~~ 123 (538)
+++|+|++|+|+++. ++++|+|+||||++|++.. ..+.+.++||++|++|+|||||+|+|+....... .+
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGSC
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCCCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcCC
Confidence 589999999998752 6789999999999999865 3456789999999999999999999998662111 11
Q ss_pred hhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc----ccceeeee------ee--------------
Q 009282 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDYGF------HM-------------- 175 (538)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~-------------- 175 (538)
++.. ...++.++++||||++|++.... ....++...+.+. +....... +.
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 160 (403)
T 3gnh_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAADY--DDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNP 160 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeeEEEeCCCCcc--ccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCC
Confidence 2211 12346789999999999965422 2223333333332 21111110 00
Q ss_pred eeecCChhhHHHHHHHHHHcCCcEEEEEee--------eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
......++..+.++++. +.|.+.+|++.+ +.+...++.++++++++.|+++|+++.+|+.+...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~--- 236 (403)
T 3gnh_A 161 FNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREA--- 236 (403)
T ss_dssp TCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH---
T ss_pred cccCCHHHHHHHHHHHH-HcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---
Confidence 01112244566666666 679999999975 335567899999999999999999999999876543322
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcc---
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS--- 324 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~--- 324 (538)
.+.|. + .+.|+...+. +.++++++.|+.+++++..........
T Consensus 237 -~~~g~-------------------------------~-~i~H~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 282 (403)
T 3gnh_A 237 -VRAGV-------------------------------D-TIEHASLVDD-EGIKLAVQKGAYFSMDIYNTDYTQAEGKKN 282 (403)
T ss_dssp -HHTTC-------------------------------S-EEEECTTCCH-HHHHHHHHHTCEEECCCSTHHHHHHHHHHH
T ss_pred -HHhCC-------------------------------C-EEecCCcCCH-HHHHHHHHCCCEEEeeechhhhhhhhcccc
Confidence 22332 2 5889987776 889999999998876654321111000
Q ss_pred cccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh
Q 009282 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM 404 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 404 (538)
.+...++...... .......++.++++|+++++|||+...+... . ...+..+
T Consensus 283 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~---------------~------~~e~~~~ 334 (403)
T 3gnh_A 283 GVLEDNLRKDRDI-------GELQRENFRKALKAGVKMVYGTDAGIYPHGD---------------N------AKQFAVM 334 (403)
T ss_dssp TCCHHHHHHHHHH-------HHHHHHHHHHHHHHTCEEECCCCBTTBCTTC---------------G------GGHHHHH
T ss_pred CCCHHHHHHHHHH-------HHHHHHHHHHHHHCCCeEEEecCCCCCCCCc---------------h------HHHHHHH
Confidence 0000000000000 0011245778999999999999974332110 0 0111122
Q ss_pred hhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEEC
Q 009282 405 VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 484 (538)
Q Consensus 405 ~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~ 484 (538)
.+ .++|+.|+|+++|.|||+++|+++++|+|++||.|||||+|.|+..++.. ..+|+.||++
T Consensus 335 ~~-~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~-----------------~~~v~~v~~~ 396 (403)
T 3gnh_A 335 VR-YGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVTT-----------------LEKPVFVMKG 396 (403)
T ss_dssp HH-TTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGGG-----------------GGSCSEEEET
T ss_pred HH-cCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHH-----------------hcCcCEEEEC
Confidence 33 36999999999999999999998889999999999999999987644321 3579999999
Q ss_pred CEEEEE
Q 009282 485 GRVVWE 490 (538)
Q Consensus 485 G~~V~~ 490 (538)
|++|+.
T Consensus 397 G~~v~~ 402 (403)
T 3gnh_A 397 GAVVKA 402 (403)
T ss_dssp TEEEEC
T ss_pred CEEEeC
Confidence 999874
No 23
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=1.4e-40 Score=342.51 Aligned_cols=361 Identities=18% Similarity=0.156 Sum_probs=235.4
Q ss_pred cccEEEECcEEEcCCCc---eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC-----CCC
Q 009282 52 SSKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-----~~~ 123 (538)
+.+++|+|++|+|+++. ++++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...... ..+
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 82 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQP 82 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCCCCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCC
Confidence 45799999999998753 5789999999999999865556678999999999999999999999876221 011
Q ss_pred hhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeee-------------------------
Q 009282 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH------------------------- 174 (538)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 174 (538)
++.. ...++.++++||||++|++.... ...+.++.....+++.+......
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (423)
T 3feq_A 83 NILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRT 161 (423)
T ss_dssp HHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccc
Confidence 1111 23456679999999999864321 22222222211122211110000
Q ss_pred ---eeeecCChhhHHHHHHHHHHcCCcEEEEEee--------eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHH
Q 009282 175 ---MAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (538)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~ 243 (538)
.......++..+.++++. +.|++.+|++.+ +++...++.+.++++++.|+++|+++.+|+.+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~ 240 (423)
T 3feq_A 162 GAIARVVDGVEGVRLAVREEI-QKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIAR 240 (423)
T ss_dssp TCSEEECCSHHHHHHHHHHHH-HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHH
T ss_pred cccceecCCHHHHHHHHHHHH-HcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 011122234555666666 679999999876 34455789999999999999999999999986543332
Q ss_pred HHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCc
Q 009282 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (538)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~ 323 (538)
.+ +.|. + .+.|+...+. +.++++++.|+.++.+.......+..
T Consensus 241 ~l----~~g~-------------------------------~-~i~H~~~~~~-~~~~~l~~~gv~~~pt~~~~~~~~~~ 283 (423)
T 3feq_A 241 AV----RCGV-------------------------------R-TIEHGNLVDE-AAAKLMHEHGAFVVPTLVTYDALAKH 283 (423)
T ss_dssp HH----HHTC-------------------------------C-EEEEEEECCH-HHHHHHHHHTCEEECCTHHHHHHHHH
T ss_pred HH----HcCC-------------------------------C-EEeccCcCCH-HHHHHHHHCCCccccchHHHHHHHhc
Confidence 22 2232 2 4778776665 88899999998876553332111110
Q ss_pred ccccCCCcccccceeecCCCCCc------ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhH
Q 009282 324 SWLWHSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 397 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~p~~r~~------~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~ 397 (538)
. ......|..+.. ....+++.++++|+++++|||+...... ..
T Consensus 284 ~----------~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~---------------------~~ 332 (423)
T 3feq_A 284 G----------AEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMHA---------------------FQ 332 (423)
T ss_dssp T----------GGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGGG---------------------GT
T ss_pred c----------cccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCc---------------------ch
Confidence 0 000111111111 1345678899999999999997532111 00
Q ss_pred HHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeE
Q 009282 398 HLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGK 477 (538)
Q Consensus 398 ~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (538)
...+. ..... +|++|||+++|.|||+++|+++++|+|++||.|||||+|.|++.++.. +... ..+
T Consensus 333 ~~e~~-~~~~~-ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~-----------~~~~--~~~ 397 (423)
T 3feq_A 333 SGEFR-IRAEV-LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIGV-----------VADE--GAR 397 (423)
T ss_dssp THHHH-HHHTT-SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCGGG-----------TSSS--TTS
T ss_pred HHHHH-HHHhh-CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHH-----------Hhcc--CCC
Confidence 11121 22344 999999999999999999998889999999999999999987644321 1100 147
Q ss_pred EEEEEECCEEEEECCeeecc
Q 009282 478 VEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 478 v~~V~v~G~~V~~~~~~~~~ 497 (538)
|..||++|++|+++++..+-
T Consensus 398 v~~v~~~G~~v~~~~~~~~~ 417 (423)
T 3feq_A 398 VEYVLQRGTLVKRQAAGREG 417 (423)
T ss_dssp EEEEEETTEEEEEC------
T ss_pred ceEEEECCEEEeCCcccccc
Confidence 99999999999999887654
No 24
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=2.2e-40 Score=341.19 Aligned_cols=367 Identities=16% Similarity=0.172 Sum_probs=238.6
Q ss_pred cccEEEECcEEEcCCCc---eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC-----CCC
Q 009282 52 SSKILIKGGTVVNAHHQ---QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~---~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-----~~~ 123 (538)
+++++|+|++|+++++. ++++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...... ..+
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~ 82 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLP 82 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCCCCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCC
Confidence 45789999999998642 5789999999999999865556678999999999999999999999876221 012
Q ss_pred hhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeee-------------------------
Q 009282 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH------------------------- 174 (538)
Q Consensus 124 ~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 174 (538)
.+.. ...++.++++||||++|++.... ...+.++.....+++........
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (426)
T 2r8c_A 83 NVLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCC 161 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSB
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccCCCCCccccccccccccccccccc
Confidence 2222 12345679999999999965421 12222222111122211110000
Q ss_pred ------eeeecCChhhHHHHHHHHHHcCCcEEEEEee--------eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009282 175 ------MAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (538)
Q Consensus 175 ------~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (538)
.......++..+.+++.. +.|++.+|++.+ +++...++.+.++++++.|+++|+++.+|+.+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (426)
T 2r8c_A 162 VRVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA 240 (426)
T ss_dssp CCTTCCEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHH
Confidence 011122244556666666 679999999876 33445789999999999999999999999986644
Q ss_pred HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccc
Q 009282 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~ 320 (538)
+...+ +.|. + .+.|+...+. +.++++++.|+.++.+.......
T Consensus 241 i~~al----~~G~-------------------------------~-~i~H~~~~~~-~~~~~~~~~gv~~~pt~~~~~~~ 283 (426)
T 2r8c_A 241 IARAV----RCGV-------------------------------R-TIEHGNLIDD-ETARLVAEHGAYVVPTLVTYDAL 283 (426)
T ss_dssp HHHHH----HTTC-------------------------------S-EEEECTTCCH-HHHHHHHHTTCEEECCTHHHHHH
T ss_pred HHHHH----HcCC-------------------------------C-EEecCCcCCH-HHHHHHHHcCCeEeechHHHHHH
Confidence 33222 2332 2 4889888776 88999999998886553332211
Q ss_pred cCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
+...... .+. .................++.++++|+++++|||+.+.... .....
T Consensus 284 ~~~~~~~--~~~--p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~---------------------~~~~e 338 (426)
T 2r8c_A 284 ASEGEKY--GLP--PESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQR---------------------LQSDE 338 (426)
T ss_dssp HHHTTTT--TCC--HHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGGG---------------------GTTHH
T ss_pred hhhcccc--CCC--HHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCc---------------------chHHH
Confidence 1100000 000 0000000000112356688999999999999997532111 00111
Q ss_pred HHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEE
Q 009282 401 WDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEV 480 (538)
Q Consensus 401 ~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 480 (538)
+. ..... +|++|||+++|.|||+++|+++++|+|++||.|||||||.|++.++.. +.+. ..+|..
T Consensus 339 ~~-~~~~~-l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~~~~~-----------~~~~--~~~v~~ 403 (426)
T 2r8c_A 339 FR-ILAEV-LSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDC-----------LLGQ--GEHIPL 403 (426)
T ss_dssp HH-HHTTT-SCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGG-----------TCSS--STTCCE
T ss_pred HH-HHHhc-CCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHhCHHH-----------HhCc--CCcceE
Confidence 21 22344 999999999999999999998889999999999999999987654421 1100 147999
Q ss_pred EEECCEEEEECCeeecc
Q 009282 481 TIAGGRVVWENDELNVV 497 (538)
Q Consensus 481 V~v~G~~V~~~~~~~~~ 497 (538)
||++|++|+++.+....
T Consensus 404 v~~~G~~v~~~~~~~~~ 420 (426)
T 2r8c_A 404 VMKDGRLFVNELEGHEG 420 (426)
T ss_dssp EEETTEEEEETTC----
T ss_pred EEECCEEEecccccccc
Confidence 99999999999877653
No 25
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=8.5e-40 Score=340.03 Aligned_cols=378 Identities=17% Similarity=0.162 Sum_probs=250.2
Q ss_pred EEEECc-EEEcCCC----ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC---------
Q 009282 55 ILIKGG-TVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG--------- 120 (538)
Q Consensus 55 ~~i~n~-~vv~~~~----~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~--------- 120 (538)
++|+|+ .|+++++ .++++|+|+||||++||+..+.+++.++||++|++|+|||||+|+|+......
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~ 81 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVT 81 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCC
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCCCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCC
Confidence 689999 7888775 26899999999999999876545678999999999999999999999755221
Q ss_pred -------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCC-----CHHHHHHHHHHHhcccceeee
Q 009282 121 -------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYG 172 (538)
Q Consensus 121 -------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 172 (538)
..++++++. ....++++||||+.++...... .....++...+.+.+..+..+
T Consensus 82 l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 161 (456)
T 3ls9_A 82 MASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARS 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEcc
Confidence 122222222 2344689999999998432221 233335555555544333322
Q ss_pred eeee-----------eecCChhhHHHHHHHHHH-cC---CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 173 FHMA-----------ITKWDEVVSDEMEVMVKE-KG---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 173 ~~~~-----------~~~~~~~~~~~~~~~~~~-~g---~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
.... .....++.+++..++.+. .+ ...++....+++.+.++.+.++++++.|+++|+++++|+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 162 SMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp CCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 2111 001123344555555433 23 45566777777778889999999999999999999999965
Q ss_pred hhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccc
Q 009282 238 GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
........+ ..|.. ..+.+......+.++.+.|+...+. +.++++++.|+.++.||...
T Consensus 242 ~~~~~~~~~---~~~~~-----------------~~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~~~~p~s~ 300 (456)
T 3ls9_A 242 PLDAGMSDH---LYGMT-----------------PWRFLEKHGWASDRVWLAHAVVPPR-EEIPEFADAGVAIAHLIAPD 300 (456)
T ss_dssp TTHHHHHHH---HHSSC-----------------HHHHHHHTTCSSTTEEEEECCSCCG-GGHHHHHHHTCEEEECHHHH
T ss_pred CchHHHHHH---HhCCC-----------------HHHHHHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEEChhHH
Confidence 543222222 22221 0111222233456788999988776 78999999999999888652
Q ss_pred ccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhH
Q 009282 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 397 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~ 397 (538)
+..+... .+++.++++|+++++|||+.+.+....+ +. ++..
T Consensus 301 -------------~~l~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~ 341 (456)
T 3ls9_A 301 -------------LRMGWGL------------APIREYLDAGITVGFGTTGSASNDGGNL-----LG---------DLRL 341 (456)
T ss_dssp -------------HHTTCCC------------CCHHHHHHTTCEEEECCCCTTSSCCCCH-----HH---------HHHH
T ss_pred -------------hhcCCCc------------chHHHHHHCCCcEEEECCCCccCCCCCH-----HH---------HHHH
Confidence 1111111 1278899999999999998754322111 10 1222
Q ss_pred HHHHHHhhhcC----CCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE
Q 009282 398 HLVWDTMVESG----QISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 473 (538)
Q Consensus 398 ~~~~~~~~~~~----~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
........... ++|++++|+++|.|||+++|+++ +|+|++||.|||||||.+++...+..+. .....|.+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~---~~~~~~~~~- 416 (456)
T 3ls9_A 342 AALAHRPADPNEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGRAADIACWRLDGVDRVGVHDP---AIGLIMTGL- 416 (456)
T ss_dssp HHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTSBCCEEEEESCSGGGTTBSSH---HHHHHHCCS-
T ss_pred HHHHhccccccccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEeCCCCccCCCCCh---HHHhhccCC-
Confidence 22221111111 69999999999999999999976 9999999999999999987755432110 000112221
Q ss_pred EeeEEEEEEECCEEEEECCeeeccC
Q 009282 474 VKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 474 ~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
..+|..||++|++||++|+++..|
T Consensus 417 -~~~v~~v~v~G~~v~~~g~~~~~d 440 (456)
T 3ls9_A 417 -SDRASLVVVNGQVLVENERPVLAD 440 (456)
T ss_dssp -BCCCSEEEETTEEEEETTEESSSC
T ss_pred -CCCeeEEEECCEEEEECCEeCCCC
Confidence 357999999999999999999987
No 26
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=8.1e-39 Score=333.44 Aligned_cols=392 Identities=18% Similarity=0.166 Sum_probs=276.1
Q ss_pred CcccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHH
Q 009282 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 128 (538)
|+++++|+|++|+++++ ...++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+....... +.
T Consensus 5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~--~~--- 78 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-HPARHAWDASGKIVAPGFIDVHGHDDLMFVEK--PD--- 78 (480)
T ss_dssp CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCEEEEEECTTSEEEECEEESSCCCTTHHHHS--TT---
T ss_pred ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEccCEEeccccccccccCC--hh---
Confidence 46789999999999876 378999999999999998643 44678999999999999999999986541111 11
Q ss_pred HHHHHHHhCCcEEEecc---------cCCCCC-CH---------HHHHHHHHHHh--cccceeeeeeeeee---------
Q 009282 129 SGQAAALAGGTTMHIDF---------VIPING-SL---------TAGFEAYEKKA--KNSCMDYGFHMAIT--------- 178 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~---------~~~~~~-~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~--------- 178 (538)
....+++||||+++. ...... .. ++.+..+.... ....++++++.+..
T Consensus 79 --~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~ 156 (480)
T 3gip_A 79 --LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRD 156 (480)
T ss_dssp --CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS
T ss_pred --HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcCC
Confidence 234599999999983 110000 00 11233333322 23566777665332
Q ss_pred ---cCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009282 179 ---KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 179 ---~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
..+.+.+.++.++.+ +.|+.+++.+..|......+.+++.++++.++++|.++.+|+++...
T Consensus 157 ~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~------------ 224 (480)
T 3gip_A 157 PQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEAD------------ 224 (480)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSST------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccc------------
Confidence 234556677776664 57999999988776555568899999999999999999999976421
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC---------HHHHHHHHHHHHcCCcEEEeccccccccCc
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS---------MDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~---------~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~ 323 (538)
.+.+++.+++.++.+.+.++++.|++. ...++.++.+++.|+.|+++.+++++....
T Consensus 225 --------------~~~~a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~ 290 (480)
T 3gip_A 225 --------------GVEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTI 290 (480)
T ss_dssp --------------THHHHHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEE
T ss_pred --------------cHHHHHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcch
Confidence 124678888899999999999999983 667788999999999999999999887765
Q ss_pred ccccCCCcccccceeec-------CCCCC-----------cccHHHHHHHH-----------------hcCCceEEeCCC
Q 009282 324 SWLWHSDFVTAAKYVMS-------PPIRA-----------SGHNKALQAAL-----------------ATGILQLVGTDH 368 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-------p~~r~-----------~~~~~~l~~~l-----------------~~Gv~~~lgtD~ 368 (538)
..+.+.. ...++. |+++. ....+.+.+++ ..+....+|||+
T Consensus 291 ~~l~~~~----~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~gsD~ 366 (480)
T 3gip_A 291 LIPERAE----TIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSDG 366 (480)
T ss_dssp CCGGGTT----TSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCC
T ss_pred hhhcCHH----HHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEEecCC
Confidence 5443322 222333 55533 12233333222 234456677886
Q ss_pred CCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh-cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEE
Q 009282 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIF 447 (538)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~-~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvl 447 (538)
.+... ....+....++..+..++. .+.+|++++++++|.|||+++|++ ++|+|++|+.|||||+
T Consensus 367 ~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~l~~G~~AD~vv~ 431 (480)
T 3gip_A 367 LPNDA--------------RPHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFA-ERGVLQPGAWADVVVF 431 (480)
T ss_dssp CTTCS--------------SCCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTCT-TCSSCSTTSBCCEEEE
T ss_pred cccCC--------------CCChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCCCCEEEE
Confidence 54421 1122334456666655665 467999999999999999999994 5699999999999999
Q ss_pred cCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 448 NPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 448 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
|++...+.. .+.++ +.+ ...|.+||++|++||++|++++ .+|++|++.
T Consensus 432 d~~~~~~~~--~~~~~--~~~------~~~v~~v~v~G~~v~~~g~~~~--~~G~~lr~~ 479 (480)
T 3gip_A 432 DPDTVADRA--TWDEP--TLA------SVGIAGVLVNGAEVFPQPPADG--RPGQVLRAG 479 (480)
T ss_dssp CTTTCBCCC--CSSST--TCC------CBSEEEEEETTEEEESSCCSSS--CCCCBCCC-
T ss_pred cCccccCcc--ccccc--ccc------CCCccEEEECCEEEEECCeEcC--CCCcCcCCC
Confidence 998754321 11111 112 3469999999999999999998 599999863
No 27
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=4.2e-39 Score=338.01 Aligned_cols=377 Identities=17% Similarity=0.174 Sum_probs=236.8
Q ss_pred cccEEEECcE-EEcCC--------CceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-CC
Q 009282 52 SSKILIKGGT-VVNAH--------HQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS 121 (538)
Q Consensus 52 ~~~~~i~n~~-vv~~~--------~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~~ 121 (538)
+++++|+|++ |++++ ...+++|+|+||||++||+..+ ++++++||++|++|+|||||+|+|+..... +.
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~ 87 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGE 87 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-CTTCEEEECBTCEEEECEECCCCCGGGGGCCSC
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-CCCCeEEECCCcEEeeCccccccChhhHhhcCc
Confidence 4679999999 99986 2357899999999999998653 345789999999999999999999876521 10
Q ss_pred ----------------------CChhhHHHHHHH----HHhCCcEEEecccCCCCC-----CHHHHHHHHHHHhccccee
Q 009282 122 ----------------------ETIDDFFSGQAA----ALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMD 170 (538)
Q Consensus 122 ----------------------~~~~~~~~~~~~----~l~~GvTt~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 170 (538)
.+++++....+. ++++||||++|+...... ......+...+.+.+....
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 167 (492)
T 2paj_A 88 PAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLL 167 (492)
T ss_dssp C-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEE
Confidence 234555554455 899999999998632211 1222333333323222221
Q ss_pred eeeee-e------ee-----cCChhhHHHHHHHHHHc-CC---cEEEEEeeeCCC-ccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 171 YGFHM-A------IT-----KWDEVVSDEMEVMVKEK-GI---NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 171 ~~~~~-~------~~-----~~~~~~~~~~~~~~~~~-g~---~~ik~~~~~~~~-~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
.+... . .. ...++.++++..+.+.. +. ..++++..+.+. ..++.+.++++++.|++.|+++.+
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 247 (492)
T 2paj_A 168 RGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHS 247 (492)
T ss_dssp ECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred chhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 11110 0 00 00123455555665332 21 347777777766 678999999999999999999999
Q ss_pred EcCCh-hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEE
Q 009282 234 HAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 234 H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~ 312 (538)
|+.+. .......+. +|.. .+..+. .....+.+..+.|+...+. +.++++++.|+.+..
T Consensus 248 H~~~~~~~~~~~~~~---~g~~----------------~~~~~~-~~g~~~~~~~i~H~~~~~~-~~i~~l~~~gv~v~~ 306 (492)
T 2paj_A 248 HLSETVGYQDSAYSM---YGKS----------------PVAFCG-EHDWLGSDVWYAHLVKVDA-DEIALLAQTGTGVAH 306 (492)
T ss_dssp ECC----------------CCC----------------HHHHHH-HTTCCSTTEEEESCCSCCH-HHHHHHHHHTCEEEE
T ss_pred EeCCChHHHHHHHHH---cCCC----------------HHHHHH-HCCCCCCCcEEEEEecCCH-HHHHHHHHcCCEEEE
Confidence 99763 223222211 1211 011111 1122344677899987766 779999999988777
Q ss_pred eccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcc
Q 009282 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (538)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g 392 (538)
+|... +..+. ..|| ++.++++|+++++|||+.+.+.... ++.
T Consensus 307 ~p~~~-------------~~l~~---~~~p---------~~~~~~~Gv~v~lgTD~~~~~~~~~-----~~~-------- 348 (492)
T 2paj_A 307 CPQSN-------------GRLGS---GICP---------VREMADAGVPVSIGVDGAASNEAAD-----MIS-------- 348 (492)
T ss_dssp CHHHH-------------HCC--------C---------CTTHHHHTCCEEECCCHHHHCSCCS-----HHH--------
T ss_pred Cchhh-------------cccCC---CCCC---------HHHHHHCCCcEEEeCCCCCCCCCCC-----HHH--------
Confidence 76431 11111 1123 4568899999999999754321111 111
Q ss_pred hhhhHHHHHHHh----------------hhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeec
Q 009282 393 IEERMHLVWDTM----------------VESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEIT 456 (538)
Q Consensus 393 ~~~~~~~~~~~~----------------~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~ 456 (538)
+......+... +..+++|++++|+++|.|||+++|++ ++|+|++||.|||||+|.|+++..+
T Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~~~~~~~ 426 (492)
T 2paj_A 349 -EVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLDDPRYFG 426 (492)
T ss_dssp -HHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBCCEEEEECCSGGGTT
T ss_pred -HHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC-CccccCCCCccCEEEEeCCCcccCC
Confidence 11111111111 12356999999999999999999997 7999999999999999988764421
Q ss_pred cCcccCCCCCCccCCeEE---eeEEEEEEECCEEEEECCeeeccC
Q 009282 457 ARSHHSRLDTNVYEGRRV---KGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~---~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
.+.|+++... ..+|..||++|++||++|+++..|
T Consensus 427 --------~~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~d 463 (492)
T 2paj_A 427 --------LHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGVD 463 (492)
T ss_dssp --------CSSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTCC
T ss_pred --------ccCHHHHHHhcCCCCCceEEEECCEEEEECCeeccCC
Confidence 1345544211 247999999999999999999887
No 28
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1e-38 Score=332.83 Aligned_cols=381 Identities=15% Similarity=0.080 Sum_probs=241.1
Q ss_pred cEEEECcEEEcCCC---------------ceeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccc
Q 009282 54 KILIKGGTVVNAHH---------------QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLA 115 (538)
Q Consensus 54 ~~~i~n~~vv~~~~---------------~~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~ 115 (538)
.++|.+++|+++.. .++++|+|+||||++||+..+. .++.++||++|++|+|||||+|+|+.
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~ 83 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLP 83 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGG
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHH
Confidence 46788999998654 2588999999999999975322 13578999999999999999999986
Q ss_pred cccC----CCC-----------------ChhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhccccee
Q 009282 116 MEFM----GSE-----------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD 170 (538)
Q Consensus 116 ~~~~----~~~-----------------~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (538)
.... +.. +++.+ ....+.++++||||++++...........++...+.+.+....
T Consensus 84 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~g 163 (475)
T 2ood_A 84 QTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRVIAG 163 (475)
T ss_dssp GTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred hHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeEEEE
Confidence 4321 110 23333 2346678999999999975322111223333344444332211
Q ss_pred eeeeee-ee----cCChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcCCh-hhHH
Q 009282 171 YGFHMA-IT----KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENG-DAVF 242 (538)
Q Consensus 171 ~~~~~~-~~----~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~~~-~~~~ 242 (538)
..+... .. ...++.+.+..++.+. .+...++..+.+++.+.++++.++++++.|+++ |+++++|+.+. .+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~ 243 (475)
T 2ood_A 164 LTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECS 243 (475)
T ss_dssp CEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHH
T ss_pred eeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHH
Confidence 111110 01 1112344445555532 245567777777777788899999999999999 99999999643 3333
Q ss_pred HHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccC
Q 009282 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (538)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~ 322 (538)
...+ .+|... . ...+++.....+.+..+.|+...+. +.++++++.|+.+..+|....
T Consensus 244 ~~~~---~~g~~~--------~-------~~~~~~~~g~~~~~~~i~H~~~~~~-~~i~~~~~~g~~~~~~P~~~~---- 300 (475)
T 2ood_A 244 GVLV---EHPDCQ--------D-------YLGVYEKFDLVGPKFSGGHGVYLSN-NEFRRMSKKGAAVVFCPCSNL---- 300 (475)
T ss_dssp HHHH---HCTTCS--------S-------HHHHHHTTTCCSTTEEEECCTTCCH-HHHHHHHHHTCEEEECHHHHH----
T ss_pred HHHH---HcCCCc--------c-------HHHHHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCEEEEChhhhh----
Confidence 2222 122110 0 0111111123456788999988776 889999999988877765311
Q ss_pred cccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCc--eEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL--QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~--~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
..+. ..+| ++.++++|++ +++|||+.+.+.. +++. +......
T Consensus 301 ---------~l~~---~~~~---------~~~~~~~Gv~~~~~lgTD~~~~~~~------~~~~---------~~~~~~~ 344 (475)
T 2ood_A 301 ---------FLGS---GLFR---------LGRATDPEHRVKMSFGTDVGGGNRF------SMIS---------VLDDAYK 344 (475)
T ss_dssp ---------HTTC---CCCC---------HHHHTCTTSCCEEEECCCBTTBSCC------CHHH---------HHHHHHH
T ss_pred ---------hccc---CcCC---------HHHHHhCCCCCcEEEEccCCCCCCc------CHHH---------HHHHHHH
Confidence 1111 1122 7899999999 9999998653211 0111 1111111
Q ss_pred HHH-----hh-------------hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCccc-
Q 009282 401 WDT-----MV-------------ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHH- 461 (538)
Q Consensus 401 ~~~-----~~-------------~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~- 461 (538)
+.. +. ...++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|+++.++.+...
T Consensus 345 ~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~ 424 (475)
T 2ood_A 345 VGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPWHQSL 424 (475)
T ss_dssp HHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHHHHTT
T ss_pred HhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccccccc
Confidence 111 10 12579999999999999999999988899999999999999999887654332111
Q ss_pred -----CC----CCCCccCCeEE---eeEEEEEEECCEEEEECCe
Q 009282 462 -----SR----LDTNVYEGRRV---KGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 462 -----~~----~~~~~~~~~~~---~~~v~~V~v~G~~V~~~~~ 493 (538)
++ ..++||.+..+ .++|..||++|++||++.+
T Consensus 425 ~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 425 IADGAGPRTVDEAASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp C--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred cccccccccccchhhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 00 01345554333 4689999999999999865
No 29
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=2.3e-37 Score=316.98 Aligned_cols=351 Identities=19% Similarity=0.179 Sum_probs=224.9
Q ss_pred CcccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC------C
Q 009282 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------E 122 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~------~ 122 (538)
|+.+++|+|++|+++++ ...++|+|+||||++|++. .+.+.++||++|++|+|||||+|+|+. ..... .
T Consensus 4 ~~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~--~~~~~~viD~~g~~v~PGlID~H~H~~-~~~~~~~~~~~~ 80 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI--NTKDATVISIPDLILIPGLMDSHVHIV-GNDSKGEESIAD 80 (408)
T ss_dssp -CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC--CCSSSEEEEEEEEEEEECEEEEEECCS-SCCCCSGGGTTC
T ss_pred ccceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC--CCCCCeEEECCCCEECcCceeeeEccc-CCCCcchhhhcC
Confidence 45689999999999875 3348999999999999986 244578999999999999999999997 31100 1
Q ss_pred ChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc----ccce------eeeeeeeeecC--------
Q 009282 123 TIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCM------DYGFHMAITKW-------- 180 (538)
Q Consensus 123 ~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~-------- 180 (538)
+++... ...+.++++||||++|+..... ....++...+.+. +... ..+.+......
T Consensus 81 ~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (408)
T 3be7_A 81 SSHMGTVWGVVNAEKTLMAGFTTVRNVGAANY--ADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSS 158 (408)
T ss_dssp CTHHHHHHHHHHHHHHHTTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEeCCCccc--cCHHHHHHHHCCCCCCCEEEEccceeeccCCCCccccccccccccC
Confidence 222221 1467789999999999864322 2223333333322 1000 00001000000
Q ss_pred --ChhhHHHHHHHH---HHcCCcEEEEEeee--------CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 181 --DEVVSDEMEVMV---KEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 181 --~~~~~~~~~~~~---~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
......++.++. ...|.+.+|++.+. .+...++.+.++++++.|+++|+++.+|+.+...+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~-- 236 (408)
T 3be7_A 159 EGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAI-- 236 (408)
T ss_dssp TTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH--
T ss_pred CcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--
Confidence 011223333222 15688999998643 124567899999999999999999999998764332221
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccccc
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (538)
+. +.. .+.|+..... +.++++++.|+.+++++.....+...
T Consensus 237 --~~-------------------------------g~~-~i~H~~~~~~-~~i~~~~~~g~~v~~~~~~~~~~~~~---- 277 (408)
T 3be7_A 237 --KA-------------------------------GVD-SVEHASFIDD-ETIDMAIKNNTVLSMDIFVSDYILGE---- 277 (408)
T ss_dssp --HH-------------------------------TCS-EEEECTTCCH-HHHHHHHHTTCEEECCCSTHHHHHTT----
T ss_pred --Hc-------------------------------CCC-EEEECCCCCH-HHHHHHHHCCCEEeeeecHHHHhhhh----
Confidence 11 222 5889988776 88999999998775443321110000
Q ss_pred CCCcccccceeecCCCCCc------ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHH
Q 009282 328 HSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401 (538)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~------~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~ 401 (538)
+....+.|+.+.. .....++.++++|+++++|||+.+.+ .|....+ +
T Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p---------------~~~~~~~------~ 330 (408)
T 3be7_A 278 ------GAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFD---------------HGDNAKQ------F 330 (408)
T ss_dssp ------TTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBC---------------TTCGGGH------H
T ss_pred ------ccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---------------CchHHHH------H
Confidence 0000011111000 11356788999999999999975321 1110011 1
Q ss_pred HHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 402 ~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
+.+++. ++|++++|+++|.|||+++|++ ++|+|++||.|||||+|.|+..++.. ..+|..|
T Consensus 331 ~~~~~~-gls~~~al~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~p~~~~~~-----------------~~~v~~v 391 (408)
T 3be7_A 331 AYMVEW-GMTPLEAIQASTIKTATLFGIE-NIGQIKEGFDADIVGVIENPLANIRT-----------------LEEVAFV 391 (408)
T ss_dssp HHHHHT-TCCHHHHHHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSCTTTCGGG-----------------TTSCCEE
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHhCCC-cccccCCCCccCEEEECCCchhhHHH-----------------hhceeEE
Confidence 123344 6999999999999999999997 89999999999999999886532211 1368999
Q ss_pred EECCEEEEECCe
Q 009282 482 IAGGRVVWENDE 493 (538)
Q Consensus 482 ~v~G~~V~~~~~ 493 (538)
|++|++|+++..
T Consensus 392 ~~~G~~v~~~~~ 403 (408)
T 3be7_A 392 MKEGKVYKREGH 403 (408)
T ss_dssp EETTEEEEECCC
T ss_pred EECCEEEecccc
Confidence 999999998753
No 30
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=1.1e-36 Score=311.23 Aligned_cols=353 Identities=15% Similarity=0.113 Sum_probs=223.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC----------CC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~----------~~ 121 (538)
+.+++|+|++|++++.. ++|+|+||||++||+..+.+ +.++||++|++|+|||||+|+|+..... +.
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~~-~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~g~ 80 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEGT-VKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKFWSR 80 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCSC-EEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTTCSS
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCCC-ccceEcCCCCEecccceeeeeccchhhcccccccccccCC
Confidence 56799999999987643 89999999999999865433 4689999999999999999999986531 11
Q ss_pred C-----------------ChhhHHH----HHHHHHhCCcEEEecccCCCCCC---HHHHHHHHHHHhcccceeeeeee-e
Q 009282 122 E-----------------TIDDFFS----GQAAALAGGTTMHIDFVIPINGS---LTAGFEAYEKKAKNSCMDYGFHM-A 176 (538)
Q Consensus 122 ~-----------------~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~ 176 (538)
. ++++++. ....++++||||++++....... ..+.+....+.. +......... .
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (403)
T 2qt3_A 81 PYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEEL-KDLIDIQVVAFA 159 (403)
T ss_dssp CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHHH-TTTCEEEEEEEC
T ss_pred CcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHHh-hcceeEEEEEcC
Confidence 0 1222222 35667899999998764332211 111111111111 1122221110 0
Q ss_pred --eecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCC
Q 009282 177 --ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGI 253 (538)
Q Consensus 177 --~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~ 253 (538)
.....++..+.+++.. +.|...++.+ .++.....+.+.++++++.|+++|+++.+|+.+... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~-~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~----------- 226 (403)
T 2qt3_A 160 QSGFFVDLESESLIRKSL-DMGCDLVGGV-DPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGV----------- 226 (403)
T ss_dssp TTCTTTSTTHHHHHHHHH-HTTCSEEECB-CTTTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHH-----------
T ss_pred CcccccCcchHHHHHHHH-hcCCCeEEEe-cCCCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchh-----------
Confidence 0011223344444444 5676665532 333333445689999999999999999999965432 11
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHcC--CCEEEEeccCHHH------HHHHHHHHHcCCcEEEeccccccccCccc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDSW 325 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~h~~~~~~------~~~i~~~~~~g~~v~~~~~~~~~~~~~~~ 325 (538)
..++.+++.+...+ .++.+.|+...+. .+.++++++.|+.++.+|..
T Consensus 227 ----------------~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~--------- 281 (403)
T 2qt3_A 227 ----------------YSINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSS--------- 281 (403)
T ss_dssp ----------------HHHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTT---------
T ss_pred ----------------HHHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCC---------
Confidence 11222233333333 3678999987653 27889999999988887642
Q ss_pred ccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh
Q 009282 326 LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (538)
Q Consensus 326 ~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~ 405 (538)
. .. . .+++.++++|+++++|||+... ++ .++|...+...+.... ...
T Consensus 282 ------~--~~--~----------~~~~~~~~~Gv~v~lgtD~~~~----------~~--~~~g~~~~~~~~~~~~-~~~ 328 (403)
T 2qt3_A 282 ------T--PP--T----------MPVIKLLEAGINLGCASDNIRD----------FW--VPFGNGDMVQGALIET-QRL 328 (403)
T ss_dssp ------C--CT--T----------CCHHHHHHTTCEEEEECCSCSS----------SS--CSCCCCCHHHHHHHHH-HHT
T ss_pred ------C--CC--C----------CCHHHHHHcCCcEEEeCCCCCC----------CC--CCCCCCCHHHHHHHHH-HHh
Confidence 0 00 0 1278899999999999997521 11 1122111111111111 000
Q ss_pred h-cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEEC
Q 009282 406 E-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAG 484 (538)
Q Consensus 406 ~-~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~ 484 (538)
. ..+++++++|+++|.|||+++|+++ .|+|++||.|||||+|.+++.. ......+|..||++
T Consensus 329 ~~~~~~~~~~al~~~T~~~A~~lg~~~-~g~i~~G~~ADlvv~d~~~~~~----------------~~~~~~~v~~v~v~ 391 (403)
T 2qt3_A 329 ELKTNRDLGLIWKMITSEGARVLGIEK-NYGIEVGKKADLVVLNSLSPQW----------------AIIDQAKRLCVIKN 391 (403)
T ss_dssp TCCSHHHHHHHHHHTTHHHHHHHTCGG-GCSSSTTSBCCEEEESSSSHHH----------------HHHHCCCEEEEEET
T ss_pred CcCCccCHHHHHHHHHHHHHHhcCCCc-ccCCCCCCcCCEEEEcCCChHH----------------HhhcCCCccEEEEC
Confidence 1 1126899999999999999999965 5999999999999999885321 11113479999999
Q ss_pred CEEEEECCeeec
Q 009282 485 GRVVWENDELNV 496 (538)
Q Consensus 485 G~~V~~~~~~~~ 496 (538)
|++||++|+++.
T Consensus 392 G~~v~~~g~~~~ 403 (403)
T 2qt3_A 392 GRIIVKDEVIVA 403 (403)
T ss_dssp TEEEEESSSBCC
T ss_pred CEEEecCCcccC
Confidence 999999998863
No 31
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=5.9e-38 Score=326.14 Aligned_cols=366 Identities=19% Similarity=0.198 Sum_probs=229.9
Q ss_pred cccEEEECcEEEcCCC--c-eeeeEEE-eCCEEEEecC--CCCCCCCceEEecCCCeeeccccccccccccccCCCC---
Q 009282 52 SSKILIKGGTVVNAHH--Q-QIADVYV-EDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE--- 122 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~-~~~~V~I-~~grI~~Vg~--~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~--- 122 (538)
+.+++|+|++|+++++ . .+++|+| +||||++||+ ....+.+.++||++|++|+|||||+|+|+........
T Consensus 12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 91 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKL 91 (458)
T ss_dssp CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCCTTCEEEECTTCEEEECEEEEEECSCC---------
T ss_pred CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCCCCCeEEECCCCEEccceeeeeeccccccccccccc
Confidence 4678999999999874 2 4689999 9999999997 4433446789999999999999999999986521100
Q ss_pred ------------Ch---------hhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeee-----eee-
Q 009282 123 ------------TI---------DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYG-----FHM- 175 (538)
Q Consensus 123 ------------~~---------~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~- 175 (538)
.. ..+....+.++++||||++|+..... ....++...+.+......+. +..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~g~r~~~~g~~~~~~ 169 (458)
T 2p9b_A 92 ATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY--EVVTLRDQIDAGQILGPRILASGPLMAIP 169 (458)
T ss_dssp --------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS--HHHHHHHHHHTTSSCCCEEECCCSCEECC
T ss_pred cchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--ccHHHHHHHHcCCCCCCeEEecccccccC
Confidence 00 12334567789999999999854322 22233333332221001110 000
Q ss_pred eee--------cCC-hhhHHHHHHHHHHcCCcEEEEEeee----------CCCccCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 176 AIT--------KWD-EVVSDEMEVMVKEKGINSFKFFMAY----------KGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 176 ~~~--------~~~-~~~~~~~~~~~~~~g~~~ik~~~~~----------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
+.. ..+ ++....++++. +.|.+.+|++.++ ++.+.++.+.++++++.|+++|+++.+|+.
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 248 (458)
T 2p9b_A 170 EGHGAPLIALTSGTPEEARTAVAQNL-KAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQ 248 (458)
T ss_dssp CSSCCCCEECCSCCHHHHHHHHHHHH-HTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCccccCccCCCHHHHHHHHHHHH-HcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 000 011 22233344444 5688899998752 123466889999999999999999999998
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHH------HcCCcE
Q 009282 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR------KAGQRV 310 (538)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~------~~g~~v 310 (538)
+...+...+ +.| .. .+.|+..... +.+++++ +.|+.+
T Consensus 249 ~~~~i~~~~----~~G-------------------------------~~-~i~H~~~~~~-~~~~~~~~~~~~~~~g~~v 291 (458)
T 2p9b_A 249 SPEGVRRSL----LAG-------------------------------VD-TIEHGSVLDD-ELIGMFRHNPNALRGYSAL 291 (458)
T ss_dssp SHHHHHHHH----HHT-------------------------------CS-EEEECCCCCH-HHHHHHHCCTTSTTSCCEE
T ss_pred CHHHHHHHH----HcC-------------------------------CC-EEEECCCCCH-HHHHHHhcccccccCCeEE
Confidence 764332221 222 22 4788877665 7888899 899766
Q ss_pred EEecccc--ccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCC
Q 009282 311 IGEPVVS--GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (538)
Q Consensus 311 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~ 388 (538)
.++..+. +........ .+. ......++.+.......++.++++|+++++|||+... + .+.
T Consensus 292 ~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~-----------~--~~~ 353 (458)
T 2p9b_A 292 IPTLSAGLPLTLLGQDVT---GIT--DIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMT-----------F--VPQ 353 (458)
T ss_dssp ECCHHHHHHHHHSCHHHH---CCC--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTST-----------T--SCT
T ss_pred EeecchhhHHHhhhcccc---cCC--HHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCC-----------C--Ccc
Confidence 4333111 111111000 000 0000001111112345678899999999999996321 1 111
Q ss_pred CCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCc
Q 009282 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNV 468 (538)
Q Consensus 389 g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~ 468 (538)
+. +...+..+++..++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|++.++..
T Consensus 354 ~~------~~~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~~~----------- 416 (458)
T 2p9b_A 354 YA------TWRELELLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRA----------- 416 (458)
T ss_dssp TC------HHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGG-----------
T ss_pred cc------HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCHHH-----------
Confidence 11 1122223444446999999999999999999998889999999999999999886532210
Q ss_pred cCCeEEeeEEEEEEECCEEEEEC--CeeeccC
Q 009282 469 YEGRRVKGKVEVTIAGGRVVWEN--DELNVVP 498 (538)
Q Consensus 469 ~~~~~~~~~v~~V~v~G~~V~~~--~~~~~~~ 498 (538)
..+|..||++|++||++ +++...|
T Consensus 417 ------~~~v~~v~v~G~~v~~~~~~~~~~~d 442 (458)
T 2p9b_A 417 ------LEHPALVIAAGHPVWRPGPKRFADID 442 (458)
T ss_dssp ------GTSCSEEEETTEECCSCCCCCCHHHH
T ss_pred ------hccceEEEECCEEEecCchhhhhhHh
Confidence 13689999999999988 7777654
No 32
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.3e-37 Score=321.86 Aligned_cols=374 Identities=16% Similarity=0.121 Sum_probs=231.7
Q ss_pred cccEEEECcEEEcCCC-----ceeeeEEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccC-C----
Q 009282 52 SSKILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---- 120 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~-----~~~~~V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~-~---- 120 (538)
|.+++|+|++|++++. ..+++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+..... +
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~ 87 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMD 87 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGGGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCS
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccccCCCceEEcCCCeEEEecceecccccchHhhhCCcCC
Confidence 5679999999999762 25889999999999999754321 35689999999999999999999986421 1
Q ss_pred CC-----------------ChhhHHHH----HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeee-ee
Q 009282 121 SE-----------------TIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-IT 178 (538)
Q Consensus 121 ~~-----------------~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 178 (538)
.. +++.+... .+.++++||||++++...........++...+.+.+.......... .+
T Consensus 88 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p 167 (439)
T 2i9u_A 88 KELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCP 167 (439)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECCSSCC
T ss_pred CCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeeccccCC
Confidence 00 12223222 3578999999999975321111233444444444332221111110 01
Q ss_pred ----cCChhhHHHHHHHHHH--cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHc
Q 009282 179 ----KWDEVVSDEMEVMVKE--KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIEL 251 (538)
Q Consensus 179 ----~~~~~~~~~~~~~~~~--~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~ 251 (538)
...++...+..++.+. .+...+++++.+.....++.+.++++++.|+++|+++.+|+.+. .+.....+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~---~~ 244 (439)
T 2i9u_A 168 DYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKS---LH 244 (439)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HC
T ss_pred cccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHH---Hh
Confidence 0111233444444432 23455777776665566789999999999999999999999653 33332222 12
Q ss_pred CCCCcccccccCCchHHHHHHHHHHHHHHHcC-CCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCC
Q 009282 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (538)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~ 330 (538)
+.. +.. ++. ++.....+ .++.+.|+..... +.++++++.|+.+..+|...
T Consensus 245 ~~~---------~~~-----~~~-~~~~g~~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~~~~p~~~------------- 295 (439)
T 2i9u_A 245 KKS---------NFY-----GEV-YDKFGLFGNTPTLMAHCIHSSK-EEINLIKRNNVTIVHCPTSN------------- 295 (439)
T ss_dssp TTC---------SSH-----HHH-HHHTTCSSSSCEEEEECCSCCH-HHHHHHHHTTCEEEECHHHH-------------
T ss_pred CCC---------CCH-----HHH-HHHcCCCCCCCeEEEEEecCCH-HHHHHHHHcCCEEEECccch-------------
Confidence 211 101 111 11122234 6677899987766 78888999998777665431
Q ss_pred cccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh-----
Q 009282 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV----- 405 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~----- 405 (538)
+..+. ..+| ++.+++.|+++++|||+.+.. ... ++. +......+.+..
T Consensus 296 ~~l~~---~~~~---------~~~~~~~Gv~~~lgtD~~~~~-~~~-----~~~---------~~~~~~~~~~~~~~~~~ 348 (439)
T 2i9u_A 296 FNLGS---GMMP---------VRKYLNLGINVVLGSDISAGH-TCS-----LFK---------VIAYAIQNSKIKWQESG 348 (439)
T ss_dssp HHTTC---CCCC---------HHHHHHTTCEEEECCCBTTBC-CSC-----HHH---------HHHHHHHHHHHHHHHTT
T ss_pred hhccc---ccCC---------HHHHHHCCCcEEEecCCCCCC-CcC-----HHH---------HHHHHHHHhcccccccc
Confidence 11111 1222 778999999999999986421 110 111 122222222222
Q ss_pred -hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEE---eeEEEEE
Q 009282 406 -ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV---KGKVEVT 481 (538)
Q Consensus 406 -~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~V 481 (538)
...++|++++|+++|.|||+++| ++|+|++||.|||||+|.++++..+ +.. +.|+.+... ..+|..|
T Consensus 349 ~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~~~~~~~-~~~-----~~~~~~~~~~~~~~~v~~v 419 (439)
T 2i9u_A 349 KKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPED-YDL-----TERLERFIYLGDDRNIMKR 419 (439)
T ss_dssp SCSCCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCTTSCGGG-SCH-----HHHHHHHHHHCCGGGEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCCCccccC-CCc-----cCHHHHheecCCCCCeeEE
Confidence 24679999999999999999999 5899999999999999998765441 100 122222111 2489999
Q ss_pred EECCEEEEECCe
Q 009282 482 IAGGRVVWENDE 493 (538)
Q Consensus 482 ~v~G~~V~~~~~ 493 (538)
|++|++||++++
T Consensus 420 ~v~G~~v~~~~~ 431 (439)
T 2i9u_A 420 YVCGNEIFGPKF 431 (439)
T ss_dssp EETTEEEC----
T ss_pred EECCEEEeeCCC
Confidence 999999998764
No 33
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=5.1e-37 Score=321.83 Aligned_cols=393 Identities=17% Similarity=0.209 Sum_probs=254.1
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHH
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 129 (538)
+++++|+|++|++++. ..+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..... .. .
T Consensus 20 ~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~--~~-----~ 91 (496)
T 1rk6_A 20 PFDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSPGFIDSHTHDDNYLL--KH-----R 91 (496)
T ss_dssp CBSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCBSCEEECTTCEEEECEEESSCCCTTHHH--HC-----T
T ss_pred cccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-CCCCeEEeCCCCEEecCEeeeeecCCcccc--cc-----H
Confidence 4579999999999865 368899999999999997542 335689999999999999999999976511 01 1
Q ss_pred HHHHHHhCCcEEEecccC-----CCC--C---CH----------HHHHHHHHHHhc--ccceeeeeeeee----------
Q 009282 130 GQAAALAGGTTMHIDFVI-----PIN--G---SL----------TAGFEAYEKKAK--NSCMDYGFHMAI---------- 177 (538)
Q Consensus 130 ~~~~~l~~GvTt~~d~~~-----~~~--~---~~----------~~~~~~~~~~~~--~~~~~~~~~~~~---------- 177 (538)
..+.++++||||++++.. +.. . .. ...+..+.+... ...+++.+..+.
T Consensus 92 ~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~ 171 (496)
T 1rk6_A 92 DMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPD 171 (496)
T ss_dssp TCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSC
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccc
Confidence 256789999999998742 110 0 00 111111111111 122333332211
Q ss_pred --ecCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009282 178 --TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 178 --~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
.....+...++..+.+ +.|+..++....+......+.+++.++++.++++|.++..|++....
T Consensus 172 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~------------ 239 (496)
T 1rk6_A 172 LRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGE------------ 239 (496)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSST------------
T ss_pred cccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc------------
Confidence 0112233445554442 46888877654332223457888999999999999999999975321
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC---------HHHHHHHHHHHHcCCcEEEeccccccccCc
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS---------MDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~---------~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~ 323 (538)
.+.+.+.+.++++.+.|.++++.|+.. ....+.++.++..| .++++.+++..+...
T Consensus 240 --------------~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~~~~~~~~~~~~ 304 (496)
T 1rk6_A 240 --------------HIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSLDAYPYVAGSTM 304 (496)
T ss_dssp --------------THHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEEEECSCSCEEEE
T ss_pred --------------cHHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEEEEeccCCCCCc
Confidence 123556777778888899999999843 22345666666688 888887765543322
Q ss_pred ccccCCCccc--ccceeecCCC--------------CCcccHHHHHHHHhcCC-----------------ceEEeCCCCC
Q 009282 324 SWLWHSDFVT--AAKYVMSPPI--------------RASGHNKALQAALATGI-----------------LQLVGTDHCA 370 (538)
Q Consensus 324 ~~~~~~~~~~--~~~~~~~p~~--------------r~~~~~~~l~~~l~~Gv-----------------~~~lgtD~~~ 370 (538)
..+. .+.. +..+...|+. +.....+.++++++.|+ ++++|||+.+
T Consensus 305 ~~~~--~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~ 382 (496)
T 1rk6_A 305 LKQD--RVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLP 382 (496)
T ss_dssp CCCC--TTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCT
T ss_pred ccHH--HhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCC
Confidence 1111 1110 1122222221 33344677778888888 6899999875
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh-cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNP 449 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~-~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~ 449 (538)
.+.. + .......+...+..++. .+.+|++++|+++|.|||++||++ ++|+|++|+.|||||+|.
T Consensus 383 ~~~~-------~-------~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl~-~~G~i~~G~~ADlv~~d~ 447 (496)
T 1rk6_A 383 HDER-------P-------HPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLA-ERGQVQPGYYADLVVFDP 447 (496)
T ss_dssp TCSS-------C-------CTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCT-TCSSCCTTSBCCEEEECT
T ss_pred CCCC-------C-------CchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCcccEEEEcC
Confidence 5310 0 01112234444433443 456999999999999999999994 589999999999999998
Q ss_pred CCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccCCCceEeecC
Q 009282 450 NSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMR 507 (538)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~~~~~~~~~~ 507 (538)
+++.+.+. +. +++. ....|..||++|++||++|++++.+ .|++++++
T Consensus 448 ~~~~~~~~--~~-----~~~~---~~~~v~~v~v~G~~v~~~g~~~~~~-~g~~l~~~ 494 (496)
T 1rk6_A 448 ATVADSAT--FE-----HPTE---RAAGIHSVYVNGAAVWEDQSFTGQH-AGRVLNRA 494 (496)
T ss_dssp TTCBCCCC--SS-----STTC---CCBSEEEEEETTEEEEETTEECSCC-CCCBCCC-
T ss_pred cccccccc--cc-----cccc---cCCCceEEEECCEEEEECCeeccCC-CceEeecC
Confidence 87543321 11 2222 1357999999999999999999887 68888754
No 34
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=6.1e-36 Score=307.61 Aligned_cols=347 Identities=17% Similarity=0.188 Sum_probs=215.7
Q ss_pred ccEEEEC-cEEEcCCC--------------ceeeeEEEeCCEEEEecCCC-C--CCCCceEEecCCCeeecccccccccc
Q 009282 53 SKILIKG-GTVVNAHH--------------QQIADVYVEDGIVVAVQPNI-N--VGDDVKVLDATGKFVMPGGIDPHTHL 114 (538)
Q Consensus 53 ~~~~i~n-~~vv~~~~--------------~~~~~V~I~~grI~~Vg~~~-~--~~~~~~vID~~G~~v~PGlID~H~H~ 114 (538)
++++|+| ++|+|+++ ..+++|+|+||||++||+.. . .+ ..++||++|++|+|||||+|+|+
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~-~~~viD~~G~~v~PGfID~H~H~ 83 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE-ADEIIDCSGRLVTPGLVDPHTHL 83 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCE-EEEEEECTTCEEEECEEECCBCC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCC-CCeEEeCCCCEeccCeeccCcCc
Confidence 5789999 99998753 25789999999999999764 2 22 36799999999999999999998
Q ss_pred ccccCC-------------------------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCC--CHHHHH
Q 009282 115 AMEFMG-------------------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGF 157 (538)
Q Consensus 115 ~~~~~~-------------------------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~--~~~~~~ 157 (538)
...... ..+++.+... ...++++||||+.++...... .....+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 163 (421)
T 2bb0_A 84 VFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQL 163 (421)
T ss_dssp CCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHHH
T ss_pred cccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHHH
Confidence 654100 0122222222 366789999999986322111 112233
Q ss_pred HHHHHHhcccceeee--eeee--ee-cCC---hhhHHHHH----HHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHH
Q 009282 158 EAYEKKAKNSCMDYG--FHMA--IT-KWD---EVVSDEME----VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (538)
Q Consensus 158 ~~~~~~~~~~~~~~~--~~~~--~~-~~~---~~~~~~~~----~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~ 225 (538)
+...+......+... +... .. ... ++..+... .+......+.++.+. +...++.+.++++++.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~l~~~~~~a~ 240 (421)
T 2bb0_A 164 RVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT---ETGVFTVSQSRRYLQKAA 240 (421)
T ss_dssp HHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB---CTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC---CcCCCCHHHHHHHHHHHH
Confidence 333333222111111 1100 00 000 11122111 111112234444332 223468899999999999
Q ss_pred hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHH
Q 009282 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK 305 (538)
Q Consensus 226 ~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~ 305 (538)
++|+++.+|+...... ...+. +...+. ..+.|+...++ +.++++++
T Consensus 241 ~~g~~v~~H~~~~~~~-~~~~~-------------------------------~~~~g~-~~~~H~~~~~~-~~i~~~~~ 286 (421)
T 2bb0_A 241 EAGFGLKIHADEIDPL-GGAEL-------------------------------AGKLKA-VSADHLVGTSD-EGIKKLAE 286 (421)
T ss_dssp HTTCEEEEEECSSSCC-SHHHH-------------------------------HHHTTC-SEEEECTTCCH-HHHHHHHH
T ss_pred HCCCCEEEEecccccc-CHHHH-------------------------------HHHcCC-cEEhhhhcCCH-HHHHHHHH
Confidence 9999999998532110 00111 112232 24789988777 88999999
Q ss_pred cCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCC-ChhhhhcCccCcc
Q 009282 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF-NSTQKAFGIDDFR 384 (538)
Q Consensus 306 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~-~~~~~~~~~~~~~ 384 (538)
.|+.++.+|...+. + . +.. . .+++.++++|+++++|||+.+. ++.
T Consensus 287 ~g~~~~~~p~~~~~-l----------~-~~~--~----------~~~~~~~~~Gv~v~lgtD~~~~~~~~---------- 332 (421)
T 2bb0_A 287 AGTIAVLLPGTTFY-L----------G-KST--Y----------ARARAMIDEGVCVSLATDFNPGSSPT---------- 332 (421)
T ss_dssp HTCEEEECHHHHHH-T----------T-CCC--C----------CCHHHHHHTTCCEEECCCBBTTTBCC----------
T ss_pred cCCeEEECCchhhh-h----------c-ccc--c----------chHHHHHHCCCeEEEeCCCCCCCCcc----------
Confidence 99887777653211 1 0 001 1 1278899999999999997542 111
Q ss_pred cCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCC
Q 009282 385 KIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRL 464 (538)
Q Consensus 385 ~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~ 464 (538)
..+...++.++...++|+++||+++|.|||+++|+++++|+|+|||.|||||+|.|++..+.
T Consensus 333 ----------~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~-------- 394 (421)
T 2bb0_A 333 ----------ENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIP-------- 394 (421)
T ss_dssp ----------CCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHH--------
T ss_pred ----------cCHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCH--------
Confidence 01222232344456799999999999999999999888999999999999999987653321
Q ss_pred CCCccCCeEEeeEEEEEEECCEEEEEC-Ceee
Q 009282 465 DTNVYEGRRVKGKVEVTIAGGRVVWEN-DELN 495 (538)
Q Consensus 465 ~~~~~~~~~~~~~v~~V~v~G~~V~~~-~~~~ 495 (538)
+... ..+|..||++|++||++ |+++
T Consensus 395 ----~~~~--~~~v~~t~v~G~~v~~~~g~~~ 420 (421)
T 2bb0_A 395 ----YHYG--VNHVHQVMKNGTIVVNREGAIL 420 (421)
T ss_dssp ----HSCS--SCCEEEEEETTEEEEEC-----
T ss_pred ----hHcC--CCceEEEEECCEEEEeCCcccc
Confidence 1111 24799999999999986 6654
No 35
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=4.9e-36 Score=308.03 Aligned_cols=348 Identities=17% Similarity=0.189 Sum_probs=224.7
Q ss_pred cccEEEECcEEEcCCC--c-eeeeEEEeCCEEEEecCCCCCCCCc--eEEecCCCeeeccccccccccccccCCC-----
Q 009282 52 SSKILIKGGTVVNAHH--Q-QIADVYVEDGIVVAVQPNINVGDDV--KVLDATGKFVMPGGIDPHTHLAMEFMGS----- 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~-~~~~V~I~~grI~~Vg~~~~~~~~~--~vID~~G~~v~PGlID~H~H~~~~~~~~----- 121 (538)
.++++|+|++|++++. . .+++|+|+||||++|++.. .+.+. ++||++|++|+|||||+|+|+.......
T Consensus 6 ~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 84 (418)
T 2qs8_A 6 DSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPI 84 (418)
T ss_dssp -CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CCCTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCS
T ss_pred CccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CCCCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhh
Confidence 4578999999999876 2 5789999999999999864 33456 8999999999999999999998752110
Q ss_pred -CChhhHH----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc----ccceee------eeeee----------
Q 009282 122 -ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDY------GFHMA---------- 176 (538)
Q Consensus 122 -~~~~~~~----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~---------- 176 (538)
.+++... ..++.++++||||++|+..... ....++...+.+. +..... +.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (418)
T 2qs8_A 85 KVEREMQAILATQHAYVTFKSGFTTVRQVGDSGL--VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDY 162 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSS--HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcc--ccHHHHHHHHCCCCCCCeEEecCccccccCCCcccccccccccc
Confidence 2333322 2467789999999999854321 2223333333332 111100 00000
Q ss_pred --------eecCChhhHHHHHHHHHHcCCcEEEEEeee--------CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh
Q 009282 177 --------ITKWDEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (538)
Q Consensus 177 --------~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (538)
.....++..+.+++.. ..|.+.+|++.+. .+...++.+.++++++.|+++|+++.+|+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 241 (418)
T 2qs8_A 163 DYPVPEQGVVNGPYEVYAAVRQRY-KDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEG 241 (418)
T ss_dssp CCCCGGGTEECSHHHHHHHHHHHH-HHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 0000012222333333 4688999998753 1345678999999999999999999999986644
Q ss_pred HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccc
Q 009282 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~ 320 (538)
+...+ +.| .. .+.|+..... +.++++++.|+.+. +.. ..
T Consensus 242 i~~~~----~~g-------------------------------~~-~i~H~~~~~~-~~i~~l~~~gv~v~--p~~--~~ 280 (418)
T 2qs8_A 242 MKRAI----KAG-------------------------------VD-SIEHGTFMDL-EAMDLMIENGTYYV--PTI--SA 280 (418)
T ss_dssp HHHHH----HHT-------------------------------CS-EEEECTTCCH-HHHHHHHHHTCEEE--CCH--HH
T ss_pred HHHHH----HcC-------------------------------CC-EEEECCCCCH-HHHHHHHHCCCEEe--eee--ch
Confidence 33222 112 22 4788887665 88899998887543 321 10
Q ss_pred cCcccccCCCcccccceeecCCCCC-c-------ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcc
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRA-S-------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~-~-------~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g 392 (538)
... .. ..+ .....|+.+. . .....++.++++|+++++|||+.. ++... .
T Consensus 281 ~~~--~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~-~~~~~-----~---------- 337 (418)
T 2qs8_A 281 GEF--VA----EKS-KIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGV-QKHGT-----N---------- 337 (418)
T ss_dssp HHH--HH----HHT-TSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTT-BCTTC-----T----------
T ss_pred HHH--hh----hhc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCc-CCcch-----H----------
Confidence 000 00 000 0001122111 0 113567889999999999999742 11100 0
Q ss_pred hhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCe
Q 009282 393 IEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGR 472 (538)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~ 472 (538)
...++.+++. ++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|++.++..
T Consensus 338 -----~~e~~~~~~~-gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~~~--------------- 396 (418)
T 2qs8_A 338 -----WKEFVYMVEN-GMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDISV--------------- 396 (418)
T ss_dssp -----THHHHHHHHT-TCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGG---------------
T ss_pred -----HHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhhCHHH---------------
Confidence 0111123344 6999999999999999999998889999999999999999987654422
Q ss_pred EEeeEEEEEEECCEEEEE
Q 009282 473 RVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 473 ~~~~~v~~V~v~G~~V~~ 490 (538)
..+|+.||++|+++..
T Consensus 397 --~~~i~~v~~~G~~~~~ 412 (418)
T 2qs8_A 397 --LENVDVVIKDGLLYEG 412 (418)
T ss_dssp --GGGEEEEEETTEEEEC
T ss_pred --hcCccEEEECCEEEec
Confidence 3579999999998864
No 36
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=2.5e-36 Score=315.25 Aligned_cols=388 Identities=19% Similarity=0.258 Sum_probs=237.1
Q ss_pred cccEEEECcEEE-cCCC----ceeeeEEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccCC-----
Q 009282 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMG----- 120 (538)
Q Consensus 52 ~~~~~i~n~~vv-~~~~----~~~~~V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~~----- 120 (538)
+.+++|+|++|+ |+++ .++++|+|+||||++||+..+.+ .+.++||++|++|+|||||+|+|+......
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~~ 107 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCCCCCeEEECCCCEEeeCceeHhhCcchhcccccccC
Confidence 678999999965 5553 26899999999999999876554 467899999999999999999998654210
Q ss_pred -----------------CCChhhH----HHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceeeeeeee-
Q 009282 121 -----------------SETIDDF----FSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMA- 176 (538)
Q Consensus 121 -----------------~~~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (538)
....+.. ......++..|+|++.+....... ............+.+..........
T Consensus 108 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 187 (479)
T 3hpa_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhheeecc
Confidence 0111111 122445678999999987543332 3444555544444332221111100
Q ss_pred ----------eecCChhhHHHHHHHHHH---cC-CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHH
Q 009282 177 ----------ITKWDEVVSDEMEVMVKE---KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (538)
Q Consensus 177 ----------~~~~~~~~~~~~~~~~~~---~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~ 242 (538)
......+.......+... .+ ................+.+.+.++...|.+.|..+.+|......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~-- 265 (479)
T 3hpa_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVN-- 265 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHH--
T ss_pred ccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeecccchH--
Confidence 000111222222222211 11 12233444555666778999999999999999999999854321
Q ss_pred HHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccC
Q 009282 243 EGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (538)
Q Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~ 322 (538)
+........|.. ...........+.+..+.|+..... .....+++.+..+..++.....
T Consensus 266 ~~~~~~~~~g~~-----------------~~~~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~p~~~~~--- 324 (479)
T 3hpa_A 266 DIAYSREKFGMT-----------------PAEYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVAHCPCSNMR--- 324 (479)
T ss_dssp HHHC-------C-----------------HHHHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHHHHH---
T ss_pred HHHHHHHHcCCc-----------------hHHHHhhhccccccceeeeeEecch-hHHHHHHhcCCceeeccccccc---
Confidence 111111111111 0111111233456788899887665 6677788888777766553111
Q ss_pred cccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHH-
Q 009282 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW- 401 (538)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~- 401 (538)
.+... ++ ...+.+.|+++++|||....++... ...+......+
T Consensus 325 ----------~~~~~---~~---------~~~~~~~~~~v~~gtD~~~~~~~~~--------------~~~~~~~~~~~~ 368 (479)
T 3hpa_A 325 ----------LASGI---AP---------VKKMRLAGVPVGLGVDGSASNDGAQ--------------MVAEVRQALLLQ 368 (479)
T ss_dssp ----------TTCCC---CC---------HHHHHHHTCCEEECCCCTTSSCCCC--------------HHHHHHHHHHHH
T ss_pred ----------cccCc---cc---------hhHHHhcCCcEEeeccccccCCCcc--------------HHHHHHHHHHHH
Confidence 00111 11 5677888999999999765543211 01122222222
Q ss_pred HHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEE
Q 009282 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVT 481 (538)
Q Consensus 402 ~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V 481 (538)
......+++|++++|+++|.|||++||++ ++|+|++||.|||||||.+.++...+. .++.....|.+ .++|.+|
T Consensus 369 ~~~~~~~~ls~~eal~~~T~~~A~~lgl~-~~G~I~~G~~ADlvv~D~~~~~~~~~~--~dp~~~lv~~~---~~~v~~t 442 (479)
T 3hpa_A 369 RVGFGPDAMTAREALEIATLGGAKVLNRD-DIGALKPGMAADFAAFDLRQPLFAGAL--HDPVAALVFCA---PSQTAYT 442 (479)
T ss_dssp HHHHCTTSCCHHHHHHHTTHHHHHHHTCS-SSSSCSTTSBCCEEEEETTSGGGTTCT--TSHHHHHHHSS---CCCCSEE
T ss_pred hhhccccCCCHHHHHHHHHHHHHHHhCCC-CCccCCCCCcCCEEEEcCCCccccCCc--cCHHHHhhccC---CCCceEE
Confidence 12335567999999999999999999994 689999999999999999876554321 11111112322 3579999
Q ss_pred EECCEEEEECCeeeccCCCceEee
Q 009282 482 IAGGRVVWENDELNVVPGSGKYIE 505 (538)
Q Consensus 482 ~v~G~~V~~~~~~~~~~~~~~~~~ 505 (538)
||||++||+||++++.| .++.++
T Consensus 443 iV~G~~V~~dG~~~~~D-~~~~~~ 465 (479)
T 3hpa_A 443 VVNGKVVVREGRLATLD-LPPVIE 465 (479)
T ss_dssp EETTEEEEETTEECSSC-HHHHHH
T ss_pred EECCEEEEECCcCCCCC-HHHHHH
Confidence 99999999999999988 444443
No 37
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=3.7e-36 Score=313.03 Aligned_cols=382 Identities=17% Similarity=0.140 Sum_probs=242.3
Q ss_pred cccEEEECcEEEcCCC-----ceeeeEEEeC-CEEEEecCCCCC--------CCCceEEec-CCCeeecccccccccccc
Q 009282 52 SSKILIKGGTVVNAHH-----QQIADVYVED-GIVVAVQPNINV--------GDDVKVLDA-TGKFVMPGGIDPHTHLAM 116 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~-----~~~~~V~I~~-grI~~Vg~~~~~--------~~~~~vID~-~G~~v~PGlID~H~H~~~ 116 (538)
+.+++|+|..|.+... .++++|+|+| |||++|++..+. .++.++||+ +|++|+|||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 4678999999987643 2689999998 999999986321 235789995 599999999999999865
Q ss_pred ccC-CC---C-----------------Chhh----HHH-HHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhccccee
Q 009282 117 EFM-GS---E-----------------TIDD----FFS-GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD 170 (538)
Q Consensus 117 ~~~-~~---~-----------------~~~~----~~~-~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (538)
... +. . +.++ .+. ....++++||||+.++............++..+.+.+..+.
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~ 189 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVG 189 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEe
Confidence 421 10 0 1111 111 23467899999999764332222233455556666554433
Q ss_pred eeeeeee------ecCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hhh
Q 009282 171 YGFHMAI------TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GDA 240 (538)
Q Consensus 171 ~~~~~~~------~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~~ 240 (538)
....... ....++.+++..++.+ ..+...++..+.++..+.++++.++++++.|+++|+++.+|+.+ ..+
T Consensus 190 ~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e 269 (476)
T 4aql_A 190 KVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDE 269 (476)
T ss_dssp CEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHH
T ss_pred eccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHH
Confidence 2221111 1111333444444432 23456788888888888889999999999999999999999954 433
Q ss_pred HHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccc
Q 009282 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (538)
Q Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~ 320 (538)
+....+ .++... ...+.+......+.++.+.|+....+ +.++++++.|+.+..||.+
T Consensus 270 ~~~~~~---~~~~~~---------------~~~~~~~~~g~l~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~~P~s---- 326 (476)
T 4aql_A 270 VEAVKN---LYPSYK---------------NYTSVYDKNNLLTNKTVMAHGCYLSA-EELNVFHERGASIAHCPNS---- 326 (476)
T ss_dssp HHHHHH---HCTTSS---------------SHHHHHHTTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEECHHH----
T ss_pred HHHHHH---HhCCCC---------------CHHHHHHHcCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEECchh----
Confidence 333332 222100 01112222334466888999998877 8899999999999998875
Q ss_pred cCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHH
Q 009282 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (538)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~ 400 (538)
++..+.+. .+++.+++.|+++++|||..+.+.. . .+. ++.....
T Consensus 327 ---------n~~l~~g~------------~p~~~~~~~Gv~v~lGtD~~~~~~~-~-----~~~---------~~~~a~~ 370 (476)
T 4aql_A 327 ---------NLSLSSGF------------LNVLEVLKHEVKIGLGTDVAGGYSY-S-----MLD---------AIRRAVM 370 (476)
T ss_dssp ---------HHHTTCCC------------CCHHHHHHTTCEEEECCCTTTSSCC-C-----HHH---------HHHHHHH
T ss_pred ---------hhhhCcch------------HHHHHHHHCCCcEEEeCCCCCCCCC-C-----HHH---------HHHHHHH
Confidence 22222221 1278899999999999997532211 1 111 1222222
Q ss_pred HHHhh-----hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCc----ccCCCCCCccCC
Q 009282 401 WDTMV-----ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARS----HHSRLDTNVYEG 471 (538)
Q Consensus 401 ~~~~~-----~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~----~~~~~~~~~~~~ 471 (538)
+.+.. ...+++++++|+++|.|||+++|+++++|+|++||.|||||+|.+.+.. +... ..+.....|+.+
T Consensus 371 ~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~-p~~~~~~~~~~~~~~~~~~~ 449 (476)
T 4aql_A 371 VSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDS-PIDLFYGDFFGDISEAVIQK 449 (476)
T ss_dssp HHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTC-SCCCCTHHHHSSSTTHHHHH
T ss_pred HHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCC-ccccccccccCCchhcHHHH
Confidence 21221 2357999999999999999999998889999999999999999885321 0000 000001122222
Q ss_pred eEE---eeEEEEEEECCEEEEECCe
Q 009282 472 RRV---KGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 472 ~~~---~~~v~~V~v~G~~V~~~~~ 493 (538)
... ..+|..||++|++||+.+.
T Consensus 450 ~v~~~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 450 FLYLGDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp HHHHCCGGGEEEEEETTEEEECCC-
T ss_pred HhhcCCCCCccEEEECCEEEecCCC
Confidence 111 2469999999999998643
No 38
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=6.6e-36 Score=306.80 Aligned_cols=347 Identities=15% Similarity=0.124 Sum_probs=219.0
Q ss_pred ccEEEECcEEEcCCC-----c--eeeeEEEeCCEEEEecCCCCCCC--CceEEecCCCeeeccccccccccccccCC---
Q 009282 53 SKILIKGGTVVNAHH-----Q--QIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFMG--- 120 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~-----~--~~~~V~I~~grI~~Vg~~~~~~~--~~~vID~~G~~v~PGlID~H~H~~~~~~~--- 120 (538)
++++|+|++|+|+++ . .+++|+|+||||++||+....+. +.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~ 84 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEE 84 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--CCTTSEECTTCEEEECEEEEEECCCCCSCCHHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccccCCCeEEeCCCCEECCcccccccCcchhhhhHHH
Confidence 578999999999765 2 57899999999999998654433 46799999999999999999998764110
Q ss_pred ----------------------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcc
Q 009282 121 ----------------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKN 166 (538)
Q Consensus 121 ----------------------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~ 166 (538)
..+++.+... .+.++++||||++++...... .....++...+....
T Consensus 85 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2q09_A 85 FELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEA 164 (416)
T ss_dssp HHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHhh
Confidence 0133333322 366789999999997432211 112333333333222
Q ss_pred cceeee--eee--eee-cC---ChhhHHHHH-HHHH---HcC-CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 167 SCMDYG--FHM--AIT-KW---DEVVSDEME-VMVK---EKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 167 ~~~~~~--~~~--~~~-~~---~~~~~~~~~-~~~~---~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
..+.+. +.. ... .. .++..+... .+.. ..+ .+.++.+ .+...++.+.++++++.|+++|+++.+
T Consensus 165 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (416)
T 2q09_A 165 LPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVF---CEHIGFSLAQTEQVYLAADQYGLAVKG 241 (416)
T ss_dssp SSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEB---BSTTSBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccc---cCCCcCCHHHHHHHHHHHHHCCCcEEE
Confidence 111111 110 011 00 111222111 1111 223 4455443 233456899999999999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEe
Q 009282 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (538)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~ 313 (538)
|+....... ..+.+ ...+.. .+.|+...++ +.++++++.|+.++.+
T Consensus 242 H~~~~~~~~-~~~~~-------------------------------~~~g~~-~~~H~~~~~~-~~~~~~~~~g~~~~~~ 287 (416)
T 2q09_A 242 HMDQLSNLG-GSTLA-------------------------------ANFGAL-SVDHLEYLDP-EGIQALAHRGVVATLL 287 (416)
T ss_dssp EESSSCCCS-HHHHH-------------------------------HHTTCS-EEEECTTCCH-HHHHHHHHHTCEEEEC
T ss_pred EECCCCchH-HHHHH-------------------------------HHcCCC-EEeecccCCH-HHHHHHHHcCCeEEEc
Confidence 996532100 11111 112322 4788887776 8899999999887776
Q ss_pred ccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcch
Q 009282 314 PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI 393 (538)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~ 393 (538)
|.....+ . +. ..++ ++.++++|+++++|||+.+....
T Consensus 288 p~~~~~~-----------~-~~---~~~~---------~~~~~~~Gv~~~~gtD~~~~~~~------------------- 324 (416)
T 2q09_A 288 PTAFYFL-----------K-ET---KLPP---------VVALRKAGVPMAVSSDINPGTAP------------------- 324 (416)
T ss_dssp HHHHHHT-----------T-CC---CCCC---------HHHHHHTTCCEEECCCCBTTTBC-------------------
T ss_pred CccHHhh-----------c-cc---cccC---------HHHHHHCCCeEEEecCCCCccCC-------------------
Confidence 6532110 0 00 1112 78899999999999997542110
Q ss_pred hhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE
Q 009282 394 EERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR 473 (538)
Q Consensus 394 ~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (538)
...+...++.++...++|++++|+++|.|||+++|+++++|+|++||.|||||+|.|++..+ ++...
T Consensus 325 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~------------~~~~~- 391 (416)
T 2q09_A 325 IVSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAEL------------SYLIG- 391 (416)
T ss_dssp CCCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHH------------HHSCS-
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhh------------hhhhc-
Confidence 00122223334444569999999999999999999988899999999999999998876432 23222
Q ss_pred EeeEEEEEEECCEEEEECCe
Q 009282 474 VKGKVEVTIAGGRVVWENDE 493 (538)
Q Consensus 474 ~~~~v~~V~v~G~~V~~~~~ 493 (538)
..+|..||++|++||+++.
T Consensus 392 -~~~v~~v~v~G~~v~~~~~ 410 (416)
T 2q09_A 392 -VDQLVSRVVNGEETLHGEG 410 (416)
T ss_dssp -CCCEEEEEETTEECCC---
T ss_pred -cCcceEEEECCEEEEeCCC
Confidence 3579999999999998753
No 39
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5e-37 Score=315.24 Aligned_cols=359 Identities=18% Similarity=0.136 Sum_probs=219.7
Q ss_pred cCcccEEEECcEEEcCCC---ceeeeEEEe-CCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChh
Q 009282 50 QSSSKILIKGGTVVNAHH---QQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (538)
Q Consensus 50 ~~~~~~~i~n~~vv~~~~---~~~~~V~I~-~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~ 125 (538)
.|+++++|+|++|++++. ..+++|+|+ ||||++|++..+.+.+.++||++|++|+|||||+|+|+..+ +....+
T Consensus 12 ~~~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~ 89 (417)
T 2ogj_A 12 PLQAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPADTQRIDAKGAFISPGWVDLHVHIWHG--GTDISI 89 (417)
T ss_dssp --CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCSSCEEECCC--CEEEECEEEEEECCCBT--TBSSCC
T ss_pred cCCCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCCCCCeEEECCCCEEccCeeecccccccc--ccccCC
Confidence 334679999999999875 368899999 99999999764433356899999999999999999999875 211111
Q ss_pred hHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc---ccceeeeeeeeee-----cCC---hhhHHHHHHHHHH
Q 009282 126 DFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDYGFHMAIT-----KWD---EVVSDEMEVMVKE 194 (538)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~ 194 (538)
. ....++++||||++|++...........+...+... ..++.+....... ... ....+++.++.+.
T Consensus 90 ~---~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~~ 166 (417)
T 2ogj_A 90 R---PSECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYAE 166 (417)
T ss_dssp C---GGGTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHHT
T ss_pred C---HHHHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHHh
Confidence 1 123578999999999864333222121221111111 1111111100000 000 0123445555533
Q ss_pred c--CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 195 K--GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-VFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 195 ~--g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +...+|++..+......+.+.+++.++.|+++|+++.+|+.+... ..+....
T Consensus 167 ~~~~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~------------------------ 222 (417)
T 2ogj_A 167 NSEHIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEI------------------------ 222 (417)
T ss_dssp CTTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHH------------------------
T ss_pred CCCceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHH------------------------
Confidence 2 345678776643334457788899999999999999999965321 2111111
Q ss_pred HHHHHHHHHHcCCCEEEEeccC----------HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~----------~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
.+....+.|+.. ....+.+.++++.|+.+..++.. ..
T Consensus 223 ----------l~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~------------------~~----- 269 (417)
T 2ogj_A 223 ----------LGPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGG------------------AS----- 269 (417)
T ss_dssp ----------CCTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCS------------------SS-----
T ss_pred ----------hcCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCC------------------cc-----
Confidence 111135666543 11235666677777655333221 00
Q ss_pred CCCCcccHHHHHHHHhcC-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHh
Q 009282 342 PIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTS 420 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT 420 (538)
.....++.++++| ++++++||+. .+.. .| ....+...+++++. .++|++++++++|
T Consensus 270 -----~~~~~~~~~~~~G~~~~~lgtD~~-~~~~-------------~g---~~~~l~~~~~~~~~-~~l~~~~al~~~T 326 (417)
T 2ogj_A 270 -----FSFKVAEAAIARGLLPFSISTDLH-GHSM-------------NF---PVWDLATTMSKLLS-VDMPFENVVEAVT 326 (417)
T ss_dssp -----CCHHHHHHHHHTTCCCSBCCBCBS-TTTT-------------TT---TCCCHHHHHHHHHH-TTCCHHHHHHTTT
T ss_pred -----ccchHHHHHHHcCCCceEEEcCCC-CCcc-------------CC---ChhHHHHHHHHHHH-cCCCHHHHHHHHH
Confidence 0235588999999 9999999976 4210 00 01124444444444 4599999999999
Q ss_pred HhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEee----EEEEEEECCEEEEECCeeec
Q 009282 421 TECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 421 ~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~V~v~G~~V~~~~~~~~ 496 (538)
.|||++||+++ +|+|++||.|||||+|.+.++.. +.++.+..+.+ +|..||++|++||++++++.
T Consensus 327 ~n~A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~ 395 (417)
T 2ogj_A 327 RNPASVIRLDM-ENRLDVGQRADFTVFDLVDADLE----------ATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPR 395 (417)
T ss_dssp HHHHHHTTCCC-SSTTSTTSBCEEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCC
T ss_pred HHHHHHhCCCC-CCccCCCCcccEEEEecccCCce----------ecCCCCceEecccccceEEEEECCEEEEeCCccch
Confidence 99999999966 99999999999999997654321 22445554444 89999999999999999988
Q ss_pred cCCCceEeecC
Q 009282 497 VPGSGKYIEMR 507 (538)
Q Consensus 497 ~~~~~~~~~~~ 507 (538)
.. +++++.
T Consensus 396 ~~---~~~~~~ 403 (417)
T 2ogj_A 396 AR---KLVRHS 403 (417)
T ss_dssp C----------
T ss_pred HH---HHHHHh
Confidence 65 666654
No 40
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=1.9e-36 Score=312.19 Aligned_cols=367 Identities=18% Similarity=0.186 Sum_probs=224.7
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCC-CCceEEecCCCeeeccccccccccccccC-C---------
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~-~~~~vID~~G~~v~PGlID~H~H~~~~~~-~--------- 120 (538)
+++++|+|++|++++ .+++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+..... +
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~ 84 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGT 84 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCCCCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSSCC
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCCCCCcceEccCCCEecccccccccchhhhhhcCCCcCCCCCC
Confidence 467899999999976 6889999999999999765433 45789999999999999999999975421 1
Q ss_pred -------------CCChhhHHHH----HHHHHhCCcEEEecccCCCCCC--HHHHHHHHHHHhcccceeeeeee-ee-ec
Q 009282 121 -------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGS--LTAGFEAYEKKAKNSCMDYGFHM-AI-TK 179 (538)
Q Consensus 121 -------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 179 (538)
..+++++... +..++++||||++|+....... ..+.+....+. .+..+.+.+.. .. ..
T Consensus 85 ~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (430)
T 1ra0_A 85 LFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQE-VAPWIDLQIVAFPQEGI 163 (430)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHH-HTTTCEEEEEEECTTCS
T ss_pred HHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHh-hhhhEEEEEEecCCccc
Confidence 0123444333 3445799999999986431211 12222211111 12333332211 00 01
Q ss_pred C-ChhhHHHHHHHHHHcCCcEEEEEeeeCCCcc--CCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCC
Q 009282 180 W-DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITG 255 (538)
Q Consensus 180 ~-~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~ 255 (538)
. ..+..+.++++. +.|...+... ....+. .+.+.++++++.|+++|+++.+|+.+. ......++
T Consensus 164 ~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~--------- 231 (430)
T 1ra0_A 164 LSYPNGEALLEEAL-RLGADVVGAI--PHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVE--------- 231 (430)
T ss_dssp SSSTTHHHHHHHHH-HTTCSEECCC--GGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHH---------
T ss_pred ccCchHHHHHHHHH-HhCCCeEeee--ecccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHH---------
Confidence 1 223344455555 4555444322 222222 578899999999999999999999543 22111111
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHH------HHHHHHHHcCCcEEEeccccccccCcccccCC
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM------EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~------~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~ 329 (538)
.+.+.+.... .+.++++.|+...... +.++++++.|+.++.+|..... +...
T Consensus 232 ---------------~~~~~~~~~g-~~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~-~~~~----- 289 (430)
T 1ra0_A 232 ---------------TVAALAHHEG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIH-LQGR----- 289 (430)
T ss_dssp ---------------HHHHHHHHHT-CGGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHH-HTTT-----
T ss_pred ---------------HHHHHHHHhC-CCCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhh-hccc-----
Confidence 1111111111 2456789998876542 4889999999988877653221 1110
Q ss_pred CcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCC-Ccch-hhhHHHHHHHhhhc
Q 009282 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNG-VNGI-EERMHLVWDTMVES 407 (538)
Q Consensus 330 ~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g-~~g~-~~~~~~~~~~~~~~ 407 (538)
....|+.+.. ..++.++++|+++++|||+.+.+.. +.+ ..-+ +..+...+..+ .
T Consensus 290 -------~~~~p~~~~~---~~~~~~~~~Gv~~~lgTD~~~~~~~------------~~~~~~~~~~~~~~~~~~~~--~ 345 (430)
T 1ra0_A 290 -------FDTYPKRRGI---TRVKEMLESGINVCFGHDGVFDPWY------------PLGTANMLQVLHMGLHVCQL--M 345 (430)
T ss_dssp -------TCCSSCCCCC---CCHHHHHHTTCCEEECCBCSSBTTB------------SCCCCCHHHHHHHHHHHTTC--C
T ss_pred -------cCCCCCcCCC---CCHHHHHHCCCEEEEeCCCCcccCC------------CCCCCCHHHHHHHHHHHHcc--C
Confidence 0001222111 2367899999999999998631100 000 0000 11111111110 1
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 408 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 408 ~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
.++|++++|+++|.|||+++|+++ |+|++||.|||||+|.++++... . ...+|..||++|++
T Consensus 346 ~~~~~~~al~~~T~~~A~~lg~~~--G~i~~G~~ADlvv~d~~~~~~~~-------------~---~~~~v~~v~~~G~~ 407 (430)
T 1ra0_A 346 GYGQINDGLNLITHHSARTLNLQD--YGIAAGNSANLIILPAENGFDAL-------------R---RQVPVRYSVRGGKV 407 (430)
T ss_dssp SHHHHHGGGGGGTHHHHHHTTCSS--CSSCTTSBCCEEEESSSSHHHHH-------------H---HTCCCSEEEETTEE
T ss_pred CcccHHHHHHHHHHHHHHHhCCCC--cccCCCCcCCEEEEcCCChhHHH-------------h---ccCcceEEEECCEE
Confidence 236999999999999999999964 99999999999999987653110 0 13579999999999
Q ss_pred EEECCeeecc
Q 009282 488 VWENDELNVV 497 (538)
Q Consensus 488 V~~~~~~~~~ 497 (538)
||++++++..
T Consensus 408 v~~~~~~~~~ 417 (430)
T 1ra0_A 408 IASTQPAQTT 417 (430)
T ss_dssp EEECCCCCEE
T ss_pred EecCCcceee
Confidence 9999987743
No 41
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=4.8e-37 Score=311.36 Aligned_cols=354 Identities=17% Similarity=0.116 Sum_probs=221.8
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCC-CeeeccccccccccccccCCCCChhhHHHH
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G-~~v~PGlID~H~H~~~~~~~~~~~~~~~~~ 130 (538)
+++++|+|++|++++ +++|+|+||||++|++... +++.++||++| ++|+|||||+|+|+..+ +....+ ..
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~-~~~~~~iD~~g~~~v~PG~ID~H~H~~~~--~~~~~~---~~ 74 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATIS-GSAKETIHLEPGTYVSAGWIDDHVHCFEK--MALYYD---YP 74 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCC-CCEEEEEECCTTCEEEECEEEEEECCCTT--SSSSCC---CH
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEEccCEEEeccccCcc--CccccC---ch
Confidence 457899999999865 7899999999999997543 23568999999 99999999999999875 222222 22
Q ss_pred HHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc---ccceeeeeeeeee--cC---ChhhHHHHHHHHHH--cCCcEE
Q 009282 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDYGFHMAIT--KW---DEVVSDEMEVMVKE--KGINSF 200 (538)
Q Consensus 131 ~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~--~g~~~i 200 (538)
.+.++++||||++|++...........+ ..+... ..++.+......+ .. .....++++++.++ .++.++
T Consensus 75 ~~~~~~~GvTtv~d~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 153 (379)
T 2ics_A 75 DEIGVKKGVTTVIDAGTTGAENIHEFYD-LAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGI 153 (379)
T ss_dssp HHHTGGGTEEEEEEESSSCTTTHHHHHH-HHHTSSSEEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEEEE
T ss_pred hhhHhhCceeEEEcCCCCCccCHHHHHH-HHHhhcccEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcceEE
Confidence 4678999999999986432222222233 222222 1112211111111 11 11224556666543 367778
Q ss_pred EEEeeeCCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChh-hHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHH
Q 009282 201 KFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (538)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~ 278 (538)
|.+..+......+.+.+++.++.|++ +|+++.+|+.... ...+..+.+ +.| ....|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~-~~g--~~~~H~------------------ 212 (379)
T 2ics_A 154 KARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALM-EKG--DVLTHC------------------ 212 (379)
T ss_dssp EEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHC-CTT--CEEEST------------------
T ss_pred EEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHh-hcC--Ceeeec------------------
Confidence 88776433334678889999999999 9999999996422 222222221 112 111111
Q ss_pred HHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc
Q 009282 279 AEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT 358 (538)
Q Consensus 279 ~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~ 358 (538)
..+.+.++.|.+.....+.+..+++.|+.+..++.. .. .....++.+++.
T Consensus 213 --~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~--~~--------------------------~~~~~~~~~~~~ 262 (379)
T 2ics_A 213 --FNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGT--DS--------------------------FNFHVAETALRE 262 (379)
T ss_dssp --TCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTT--TS--------------------------CCHHHHHHHHHT
T ss_pred --cCCCccchhhccCHHHHHHHHHHHHcCCEEEecCCC--CC--------------------------cCHHHHHHHHHc
Confidence 001111223322221225677778888766544321 00 012457889999
Q ss_pred C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccc
Q 009282 359 G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAIL 437 (538)
Q Consensus 359 G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~ 437 (538)
| ++++++||+.+.+. + ..+ ...+...+..++.. ++|++++++++|.|||++||+++ +|+|+
T Consensus 263 G~~~~~l~TD~~~~~~---------~-~~~------~~~~~~~l~~~~~~-~ls~~~~~~~~T~n~A~~lgl~~-~G~l~ 324 (379)
T 2ics_A 263 GMKAASISTDIYIRNR---------E-NGP------VYDLATTMEKLRVV-GYDWPEIIEKVTKAPAENFHLTQ-KGTLE 324 (379)
T ss_dssp TCCCSBCCCCBCHHHH---------H-SSS------CCCHHHHHHHHHHH-TCCHHHHHHTTTHHHHHHTTCTT-SSSCC
T ss_pred CCCcceEeccCcccCC---------C-CCc------HhHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCCC-CcCCC
Confidence 9 89999999752210 0 001 11334444344443 59999999999999999999965 99999
Q ss_pred cCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEee----EEEEEEECCEEEEECCee
Q 009282 438 VGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKG----KVEVTIAGGRVVWENDEL 494 (538)
Q Consensus 438 ~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~V~v~G~~V~~~~~~ 494 (538)
+||.|||||+|.+..+.. ++++.|..+.+ +|..||++|++||++|..
T Consensus 325 ~G~~ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 325 IGKDADLTIFTIQAEEKT----------LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp TTSBCCEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred CCCccCEEEEecccccce----------eecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 999999999997654322 45678877777 999999999999999864
No 42
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=6.1e-37 Score=313.53 Aligned_cols=354 Identities=18% Similarity=0.220 Sum_probs=218.2
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C-----------
Q 009282 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----------- 120 (538)
Q Consensus 55 ~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~----------- 120 (538)
++|+|++|+++++ ..+++|+|+||||++||+.. ++.+ ||++|++|+|||||+|+|+..... +
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~---~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 76 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE---VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWL 76 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS---CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC---Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHH
Confidence 3799999999764 46899999999999999764 2456 999999999999999999976421 0
Q ss_pred ---------CCChhhHHHHH----HHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHH
Q 009282 121 ---------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE 187 (538)
Q Consensus 121 ---------~~~~~~~~~~~----~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (538)
..+++++.... ..++++||||++|+... ....++...+.+.+.....++. .......+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~~-~~~~~~~~~~~~ 151 (406)
T 1p1m_A 77 FSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYFH----EEWIAKAVRDFGMRALLTRGLV-DSNGDDGGRLEE 151 (406)
T ss_dssp HTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEESS----HHHHHHHHHHHCCEEEEEEEEC-CBTTBCTTHHHH
T ss_pred HhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhC----HHHHHHHHHHcCCEEEEEcccc-cCCCCHHHHHHH
Confidence 02344444333 45679999999998632 2333444433333332222211 111112233444
Q ss_pred HHHHHHH-cCC-cEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHHHHHHcCCCCcccccccCC
Q 009282 188 MEVMVKE-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRP 264 (538)
Q Consensus 188 ~~~~~~~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (538)
.....+. .+. ..++....++..+.++.+.++++++.|+++|+++++|+. .........+.+ ..|.
T Consensus 152 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~-~~g~----------- 219 (406)
T 1p1m_A 152 NLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDIL-NIGL----------- 219 (406)
T ss_dssp HHHHHHHHTTGGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHH-TTTT-----------
T ss_pred HHHHHHHhhCCCCcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhh-hCCH-----------
Confidence 3333322 222 457776666666677899999999999999999999996 333222111100 0110
Q ss_pred chHHHHHHHHHHHHHHHcCCC-EEEEecc---CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeec
Q 009282 265 PLLEGEATTRAIRLAEFVNTP-LYVVHVM---SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (538)
Q Consensus 265 ~~~~~~~i~~~l~~~~~~~~~-~~~~h~~---~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (538)
...+.. ..+.|+. ..+. +.+++++ ..+|.. ++..+..
T Consensus 220 ---------------~~~g~~~~~~~H~~~~~~~~~-~~~~~~~------~~~p~~-------------~~~~~~~---- 260 (406)
T 1p1m_A 220 ---------------KEVKTIAAHCVHLPERYFGVL-KDIPFFV------SHNPAS-------------NLKLGNG---- 260 (406)
T ss_dssp ---------------TTSCEEEEECTTCCGGGTTTT-TTSSEEE------EECHHH-------------HHHTTCC----
T ss_pred ---------------hHcCcceeEeeeccCcccCCH-HHHHHHH------HhCcHH-------------HhhcCCC----
Confidence 001100 2455555 3332 2222211 222211 0111111
Q ss_pred CCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHh
Q 009282 341 PPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTS 420 (538)
Q Consensus 341 p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT 420 (538)
..+++.+++.|+++++|||+.+.+....+ +. +..+...+...+...++|++++++++|
T Consensus 261 --------~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~ls~~~al~~~T 318 (406)
T 1p1m_A 261 --------IAPVQRMIEHGMKVTLGTDGAASNNSLNL-----FF---------EMRLASLLQKAQNPRNLDVNTCLKMVT 318 (406)
T ss_dssp --------CCCHHHHHHTTCEEEECCCCTTTTSCCCH-----HH---------HHHHHHHHHHTTCTTSSCHHHHHHHHT
T ss_pred --------cCcHHHHHhCCCeEEEECCCCcCCCCCCH-----HH---------HHHHHHHHhcccCCCCCCHHHHHHHHH
Confidence 12378899999999999998765322111 11 233333333333356799999999999
Q ss_pred HhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 421 TECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 421 ~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
.|||+++|++ + |+|++||.|||||+|.+.++.++.+++.. ...|... ..+|..||++|++|| +|+++..|
T Consensus 319 ~~~A~~lgl~-~-G~l~~G~~ADlvv~d~~~~~~~~~~~~~~---~~~~~~~--~~~v~~v~v~G~~v~-~g~~~~~d 388 (406)
T 1p1m_A 319 YDGAQAMGFK-S-GKIEEGWNADLVVIDLDLPEMFPVQNIKN---HLVHAFS--GEVFATMVAGKWIYF-DGEYPTID 388 (406)
T ss_dssp HHHHHHHTCS-C-SSCCTTSBCCEEEEECCSGGGCSGGGHHH---HHHHTCC--SCCSEEEETTEEEEE-TTBCTTSC
T ss_pred HHHHHHhCCC-C-cccCCCCcccEEEEeCCccccCCccChHH---HheEecC--CCCceEEEECCEEEE-CCeeCCCC
Confidence 9999999995 4 99999999999999999776554322111 0111111 357999999999999 99999887
No 43
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=9.1e-35 Score=298.67 Aligned_cols=344 Identities=17% Similarity=0.165 Sum_probs=213.4
Q ss_pred cccEEEECcEEEcCCC-----c--eeeeEEEeCCEEEEecCCCCCCC----CceEEecCCCeeeccccccccccccccC-
Q 009282 52 SSKILIKGGTVVNAHH-----Q--QIADVYVEDGIVVAVQPNINVGD----DVKVLDATGKFVMPGGIDPHTHLAMEFM- 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~-----~--~~~~V~I~~grI~~Vg~~~~~~~----~~~vID~~G~~v~PGlID~H~H~~~~~~- 119 (538)
+.+++|+|++|+|+++ . .+++|+|+||||++||+..+.+. +.++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 93 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNR 93 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhh
Confidence 4579999999999765 2 57899999999999998654332 2589999999999999999999865310
Q ss_pred ---------C---------------------CCChhhHHH----HHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHH
Q 009282 120 ---------G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (538)
Q Consensus 120 ---------~---------------------~~~~~~~~~----~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~ 163 (538)
+ ..+++.+.. ....++++|||++.++...... .....++...+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~ 173 (419)
T 2puz_A 94 AMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRL 173 (419)
T ss_dssp HHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHHHHH
Confidence 0 012222222 2356788999999985322111 122334444443
Q ss_pred hcccceeeeee-ee---ee-cC---ChhhHHH-----HHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCe
Q 009282 164 AKNSCMDYGFH-MA---IT-KW---DEVVSDE-----MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGAL 230 (538)
Q Consensus 164 ~~~~~~~~~~~-~~---~~-~~---~~~~~~~-----~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~ 230 (538)
.....+..... .. .. .. ..+.... +..+........++.+. +...++.+.++++++.|+++|++
T Consensus 174 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g~~ 250 (419)
T 2puz_A 174 ETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFC---EGIAFSVKEIDRVFAAAQQRGLP 250 (419)
T ss_dssp TTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCEE---STTSBCHHHHHHHHHHHHHTTCC
T ss_pred hhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhccccccccccc---CCCCcCHHHHHHHHHHHHHCCCc
Confidence 32222221110 00 00 00 0111111 11111111234433322 22345789999999999999999
Q ss_pred EEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcE
Q 009282 231 AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (538)
Q Consensus 231 v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v 310 (538)
+.+|+...... ...+. +...+. ..+.|+...++ +.++++++.|+.+
T Consensus 251 v~~H~~~~~~~-~~~~~-------------------------------~~~~g~-~~~~H~~~~~~-~~~~~~~~~g~~~ 296 (419)
T 2puz_A 251 VKLHAEQLSNL-GGAEL-------------------------------AASYNA-LSADHLEYLDE-TGAKALAKAGTVA 296 (419)
T ss_dssp BEEEESSSSCC-SHHHH-------------------------------HHHTTC-SEEEECTTCCH-HHHHHHHHHTCEE
T ss_pred EEEEecccccC-CHHHH-------------------------------HHhcCC-ceehHhccCCH-HHHHHHHHcCCcE
Confidence 99999642110 01111 112232 24789988776 8889999999877
Q ss_pred EEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCC
Q 009282 311 IGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGV 390 (538)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~ 390 (538)
+.+|...+. + . +.. .++ ++.++++|+++++|||+.+.+.. .
T Consensus 297 ~~~p~~~~~-l----------~-~~~---~~~---------~~~~~~~Gv~~~lgsD~~~~~~~--------~------- 337 (419)
T 2puz_A 297 VLLPGAFYA-L----------R-EKQ---LPP---------VQALRDAGAEIALATDCNPGTSP--------L------- 337 (419)
T ss_dssp EECHHHHHH-H----------T-CCC---CCC---------HHHHHHHTCCEEECCCCCSSSCC--------B-------
T ss_pred EECCchhhh-h----------c-ccc---ccc---------HHHHHHCCCeEEEECCCCCCCCc--------c-------
Confidence 766643111 0 0 000 112 68889999999999997643110 0
Q ss_pred cchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccC
Q 009282 391 NGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYE 470 (538)
Q Consensus 391 ~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~ 470 (538)
..+...++.++...++|+++||+++|.|||+++|+++++|+|++||.|||||||.|++..+. +.
T Consensus 338 ----~~l~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~------------~~ 401 (419)
T 2puz_A 338 ----TSLLLTMNMGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELV------------YR 401 (419)
T ss_dssp ----CCHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHH------------HC
T ss_pred ----ccHHHHHHHhccccCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcch------------hh
Confidence 01222222334445699999999999999999999888999999999999999988664332 11
Q ss_pred CeEEeeEEEEEEECCEEEE
Q 009282 471 GRRVKGKVEVTIAGGRVVW 489 (538)
Q Consensus 471 ~~~~~~~v~~V~v~G~~V~ 489 (538)
.. ..+|..||++|++|.
T Consensus 402 ~~--~~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 402 IG--FNPLHARIFKGQKVS 418 (419)
T ss_dssp BS--CCCEEEEEETTEECC
T ss_pred hc--CCceEEEEECCEEcC
Confidence 00 247999999999875
No 44
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=3e-34 Score=291.55 Aligned_cols=351 Identities=17% Similarity=0.156 Sum_probs=221.1
Q ss_pred ccEEEECcEE-EcCCC----ceeeeEEEeCCEEEEecCCCCC-CCC-ceEEecCCCeeeccccccccccccccCCCCChh
Q 009282 53 SKILIKGGTV-VNAHH----QQIADVYVEDGIVVAVQPNINV-GDD-VKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (538)
Q Consensus 53 ~~~~i~n~~v-v~~~~----~~~~~V~I~~grI~~Vg~~~~~-~~~-~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~ 125 (538)
.+++|+|++| +++++ ..+++|+|+||||++|++.... +.+ .++||++|++|+|||||+|+|+... +.....
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~ 79 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDATIIDAAGSTVTPGLLDTHVHVSGG--DYAPRQ 79 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTTCTTCEEEECTTCEEEECEEEEEECCCST--TEEGGG
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCCCCCceEEcCCCCEEccceeeccccccCC--CcChhH
Confidence 4689999999 99874 2578999999999999973221 234 6899999999999999999999743 111000
Q ss_pred hHHHHHHHHHhCCcEEEecccC---CCCC-CH--H---HHHHHHHHHhcccceeeeeeeeee-cCChhhHHHHHHHHHHc
Q 009282 126 DFFSGQAAALAGGTTMHIDFVI---PING-SL--T---AGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~d~~~---~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (538)
......+.++++||||++|+.. +... .. . ..+......+.+. ....+..+.. .......++++++. +.
T Consensus 80 ~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 157 (386)
T 2vun_A 80 KTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNARP-AGVKVHGGAVILEKGLTEEDFIEMK-KE 157 (386)
T ss_dssp TEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCCG-GGCEEECCEECCCTTCCHHHHHHHH-HT
T ss_pred HHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhcccccccc-cceeeccCcccccCCcCHHHHHHHH-Hh
Confidence 1112578899999999999762 1111 12 1 1111111111110 0011111110 11111235666666 66
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
|...+|++... ...+.+.++++++.|+++|+++.+|+.+..... .+. +.+..+
T Consensus 158 g~~~ik~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~--------~~~----------------~~i~~~ 210 (386)
T 2vun_A 158 GVWIVGEVGLG---TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG--------SST----------------VTADDV 210 (386)
T ss_dssp TCCEEEEETSS---SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST--------TCS----------------CCHHHH
T ss_pred CCCeEEEeecC---CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc--------cCH----------------HHHHHH
Confidence 88899987432 235789999999999999999999996321000 000 111122
Q ss_pred HHHHHHcCCCEEEEeccC----HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHH
Q 009282 276 IRLAEFVNTPLYVVHVMS----MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~----~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (538)
+ +.|.+ .+.|+.. ... +.++++++.|+.+...+. . . + .......
T Consensus 211 ~----~~G~~-~i~H~~~~~~~~~~-~~~~~~~~~g~~vl~~~~-~-----g------~--------------~~~~~~~ 258 (386)
T 2vun_A 211 I----KTKPD-VVSHINGGPTAISV-QEVDRIMDETDFAMEIVQ-C-----G------N--------------PKIADYV 258 (386)
T ss_dssp H----HHCCS-EEETTTCSSSCCCH-HHHHHHHHHCCCEEEEES-S-----S------C--------------HHHHHHH
T ss_pred H----HcCCC-EEEEccCCCCCCCH-HHHHHHHHcCCeEEEecc-C-----C------c--------------ccccHHH
Confidence 2 23444 4889876 444 788889999987721111 0 0 0 1122356
Q ss_pred HHHHHhcCC--ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 352 LQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 352 l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
++.++++|+ +++++||++ ... ...+.| .+...++.+.. .++|++++++++|.|||++||+
T Consensus 259 ~~~~~~~g~~d~v~lgTD~p-~~~----------~~~~~g------~~~~~~~~~~~-~~ls~~~~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 259 ARRAAEKGQLGRVIFGNDAP-SGT----------GLIPLG------ILRNMCQIASM-SDIDPEVAVCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHHHHTCGGGEEEECCBS-BTT----------BBCTTH------HHHHHHHHHHH-SCCCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHHHcCCCceeEEecCCC-CCC----------CCCcch------hHHHHHHHHhh-cCCCHHHHHHHHhHHHHHHcCC
Confidence 889999999 999999973 110 001111 12222323333 5699999999999999999999
Q ss_pred CCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeE--EeeEEEEEEECCEEEEECCeeec
Q 009282 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRR--VKGKVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 430 ~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~V~v~G~~V~~~~~~~~ 496 (538)
++|+|++||.|||||+|.++. .... .++.... ...+|..||++|++|+++++...
T Consensus 321 --~~G~i~~G~~ADlvv~d~~~~-~~~~---------~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~ 377 (386)
T 2vun_A 321 --NTGVIAPGKEADLIIMDTPLG-SVAE---------DAMGAIAAGDIPGISVVLIDGEAVVTKSRNTP 377 (386)
T ss_dssp --SCSSCSTTSBCCEEEEECBTT-CSCS---------SHHHHHHHTCCCEEEEEEETTEEEESSCSSSC
T ss_pred --CceeeCCCCeeCEEEECCCcc-cccc---------hhHHHhhccCCCceeEEEECCEEEeecCcCCC
Confidence 589999999999999998863 1111 1122110 02489999999999999987666
No 45
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=8.8e-36 Score=313.11 Aligned_cols=362 Identities=16% Similarity=0.205 Sum_probs=232.2
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCC------------CCCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN------------VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~------------~~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
+++++|+|++|+++.+..+++|+|+||||++||+... .++++++||++|++|+|||||+|+|+..+
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p-- 142 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 142 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCT--
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCc--
Confidence 5689999999999776678999999999999997532 13457899999999999999999998654
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCC------C--CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN------G--SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+ ....++++||||+++++.... . .....++...+......+++++..... ....+++.++
T Consensus 143 ~---------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~~~~~~~~~g~g~---~~~~~~l~e~ 210 (569)
T 1e9y_B 143 Q---------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGN---ASNDASLADQ 210 (569)
T ss_dssp T---------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECC---CSCHHHHHHH
T ss_pred H---------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcccCceEEEECCCC---cCCHHHHHHH
Confidence 1 157889999999999854221 0 123445555555555556665543221 1234566666
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|++..+ ..+.+.++++++.|+++|+++.+|+++..+. +.
T Consensus 211 ~-~~Ga~gik~~~~~----~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~----------g~------------------ 257 (569)
T 1e9y_B 211 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEA----------GC------------------ 257 (569)
T ss_dssp H-HTTCSEEEECGGG----CCCHHHHHHHHHHHHHTTCEEEECCCTTCSS----------CC------------------
T ss_pred H-HcCCCEEEecCCC----CCCHHHHHHHHHHHHHhCCEEEEEcCCcccc----------hH------------------
Confidence 6 5788999886543 4689999999999999999999999753210 00
Q ss_pred HHHHHHHHHHcCCCEEEEeccCHHH---HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc-cceeecCCC----
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA-AKYVMSPPI---- 343 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~~~---~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~---- 343 (538)
+.+. ++...+.++|+.|++.... .+.++++++.|+.. ...++++.+..+...+ .+... ......+++
T Consensus 258 ~~~~--la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~--~~~~ptl~~t~~~~~~-~~d~~~v~h~l~~~~~ed~ 332 (569)
T 1e9y_B 258 VEDT--MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILP--ASTNPTIPFTVNTEAE-HMDMLMVCHHKDKSIKEDV 332 (569)
T ss_dssp HHHH--HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEE--EECGGGCSCBTTHHHH-HHHHHHHTTTCCSSCHHHH
T ss_pred HHHH--HHHHcCCCEEEEEcccCcccccHHHHHHHHHcCCee--EeeCCccccccchhhh-hhchhhhhhhcCcccHHHH
Confidence 0011 1234678899999987541 36788888888522 2222222221111100 00000 000011111
Q ss_pred -----CCcccHHHHHHHHh-cCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh----hhcCCCCHH
Q 009282 344 -----RASGHNKALQAALA-TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM----VESGQISVT 413 (538)
Q Consensus 344 -----r~~~~~~~l~~~l~-~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~----~~~~~ls~~ 413 (538)
+.......+++.+. .|+++++|||+.+.+...... .++|. ....+......+ ....+++++
T Consensus 333 ~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~-~~~~~--------~~~~~~~~~G~l~~~~~~~~~ls~~ 403 (569)
T 1e9y_B 333 QFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVI-TRTWQ--------TADKNKKEFGRLKEEKGDNDNFRIK 403 (569)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHH-HHHHH--------HHHHHHHHHCSCSSCCSSSCHHHHH
T ss_pred HHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccc-cchhh--------HHHHhHhhccCcchhhccccCCCHH
Confidence 11123455555555 799999999988764310000 00000 000000000000 124568999
Q ss_pred HHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC-C
Q 009282 414 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-D 492 (538)
Q Consensus 414 eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~-~ 492 (538)
++|+++|.|||+++|+++++|+|++||.|||||||++++ ..++..||++|++||++ |
T Consensus 404 ~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~----------------------~~~v~~v~~~G~iv~~~~g 461 (569)
T 1e9y_B 404 RYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF----------------------GVKPNMIIKGGFIALSQMG 461 (569)
T ss_dssp HHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT----------------------TTCCSEEEETTEEEEEEEC
T ss_pred HHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc----------------------CCCccEEEECCEEEEcCCC
Confidence 999999999999999988899999999999999998753 24688999999999986 6
Q ss_pred eeec
Q 009282 493 ELNV 496 (538)
Q Consensus 493 ~~~~ 496 (538)
+...
T Consensus 462 ~~~~ 465 (569)
T 1e9y_B 462 DANA 465 (569)
T ss_dssp CTTS
T ss_pred Cccc
Confidence 5433
No 46
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=100.00 E-value=5.2e-36 Score=307.86 Aligned_cols=371 Identities=16% Similarity=0.083 Sum_probs=231.2
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccCC----CC----
Q 009282 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG----SE---- 122 (538)
Q Consensus 55 ~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~~----~~---- 122 (538)
++|+|++|+++++. ++++|+| ||||++||+..+. .++.++||++|++|+|||||+|+|+..+... ..
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 58999999998874 5899999 9999999985432 2357899999999999999999999765211 00
Q ss_pred ------------ChhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHH
Q 009282 123 ------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (538)
Q Consensus 123 ------------~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (538)
++++. ......++++||||+.|+...... ++...+.+.+................+..+
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~-----~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~ 155 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGED-----LQACIDSALKVVYFNEVIGSNAATADVMYA 155 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSSTT-----HHHHHHBSSEEEEEEEECBCCGGGHHHHHH
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcHHH-----HHHHHhcCCeEEEeccccCCChhhhhHHHH
Confidence 11111 122345788999999998654221 344444443332222211110101111122
Q ss_pred HHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC-ChhhHHHHHH-------HHHHcCCCC
Q 009282 187 EMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQK-------RMIELGITG 255 (538)
Q Consensus 187 ~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~-~~~~~~~~~~-------~~~~~g~~~ 255 (538)
+..+... ......++..+.++..+.++++.++++++.|+++|+++++|+. +..+.....+ .+...+...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~ 235 (427)
T 3v7p_A 156 SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQT 235 (427)
T ss_dssp HHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCC
T ss_pred HHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCC
Confidence 2222221 1234567777788888888999999999999999999999984 4443332221 111222210
Q ss_pred cccccccCCchHHHHHHHHHHHHHHH-cCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccc
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 334 (538)
+|.. ...+.... .+.++.+.|+...++ +.++++++.|+.++.||... +..+
T Consensus 236 -------~~~~-------~~~~~l~~~~~~~~~~~H~~~~~~-~~~~~l~~~g~~~~~~p~s~-------------~~~~ 287 (427)
T 3v7p_A 236 -------RPVN-------DTKSFLELFKELHTLFVHMVWANE-EEIQTIASYNAHIIHCPISN-------------RLLG 287 (427)
T ss_dssp -------SCSS-------CHHHHHHTTTTSEEEEEECTTCCH-HHHHHHHHSEEEEEECHHHH-------------HHTT
T ss_pred -------Cccc-------CHHHHHhhhcCCCEEEEECCCCCH-HHHHHHHHcCCEEEECHHHH-------------HHhc
Confidence 1111 11121222 577889999998887 88999999999888887652 1121
Q ss_pred cceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHH
Q 009282 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTD 414 (538)
Q Consensus 335 ~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~e 414 (538)
.+. +| ++.+ +|+++++|||+...+....+ +. ++........ ....++++++
T Consensus 288 ~~~---~~---------~~~~--~Gv~v~lgtD~~~~~~~~~~-----~~---------~~~~a~~~~~-~~~~~~~~~~ 338 (427)
T 3v7p_A 288 NGV---LD---------LEKI--KSIPYAIATDGLSSNYSLNM-----YE---------ELKAALFVHP-NKEATTFAKE 338 (427)
T ss_dssp CCC---CC---------TTTT--TTSCEEECCCCTTSCSCCCH-----HH---------HHHHHHHHST-TSCHHHHHHH
T ss_pred CCC---CC---------HHHH--CCCeEEEeCCCCCCCCCCCH-----HH---------HHHHHHHhcc-CCCcccCHHH
Confidence 211 12 2333 89999999996544322111 11 1222211111 1111256799
Q ss_pred HHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCee
Q 009282 415 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 494 (538)
Q Consensus 415 al~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~ 494 (538)
+|+++|.|||+++|++ .|+|++||.|||||+|.+.++..+..+ |+.......+|..||++|++||++|++
T Consensus 339 ~~~~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~~~~~~~~~~~--------~~~~~~~~~~v~~v~v~G~~v~~~g~~ 408 (427)
T 3v7p_A 339 LIIRATKAGYDALGFE--GGEIAVGKDADMQLIDLPEGLTNVEDL--------YLHVILHTTKPKKVYIQGEEHVREAEN 408 (427)
T ss_dssp HHHHHTHHHHHHHTCS--CSSCCTTSBCCEEEEECCTTCCCGGGH--------HHHHHHHCSSCSEEEETTEEEEC---C
T ss_pred HHHHHHHHHHHHhCCC--CceeCCCCccCEEEEcCCCccCCCccc--------hHHHhcccCCccEEEECCEEEEECCcc
Confidence 9999999999999994 899999999999999998776554321 111111135799999999999999999
Q ss_pred eccC
Q 009282 495 NVVP 498 (538)
Q Consensus 495 ~~~~ 498 (538)
+...
T Consensus 409 ~~~~ 412 (427)
T 3v7p_A 409 LYFQ 412 (427)
T ss_dssp CCBC
T ss_pred cCCc
Confidence 8764
No 47
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.8e-34 Score=285.05 Aligned_cols=323 Identities=14% Similarity=0.144 Sum_probs=247.1
Q ss_pred CCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccc-eeeeeee
Q 009282 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSC-MDYGFHM 175 (538)
Q Consensus 99 ~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~-~~~~~~~ 175 (538)
.|++|+||+||+|+|+..+ .......+++++||||+++|....+. ...+.++.+.+... ... +++++++
T Consensus 22 ~~~~vlPG~ID~HvHlreG--------~~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~ 93 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRDN--------QMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKDENFTPLM 93 (359)
T ss_dssp SCCEEEESCEEEEECCCSH--------HHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEccCcEEccccCCCC--------CcchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence 5899999999999999652 12233458889999999999754443 45565665555443 244 7888877
Q ss_pred e--eecCChhhHHHHHHHHHHcCCcEEEEEeeeC------CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 176 A--ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 176 ~--~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~------~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
. .+..+ .+++.++. +. +.++|+|..+. +....+.+.++++++.+++.|.++.+|+++...+.
T Consensus 94 ~l~lt~~~---~~el~~l~-~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~----- 163 (359)
T 3pnu_A 94 TLFFKNYD---EKFLYSAK-DE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM----- 163 (359)
T ss_dssp EEECSCCC---HHHHHHHT-TT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-----
T ss_pred eeEecCCC---HHHHHHHH-Hh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-----
Confidence 6 55333 45566665 34 77899988641 22334889999999999999999999998765311
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHc-CCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccc
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (538)
..|...+.+++.++++. +.++|+.|+++...++.++.. .+|++++++|||.++++++
T Consensus 164 ------------------~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A----~~VtaEv~phhL~lt~~~~ 221 (359)
T 3pnu_A 164 ------------------DRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY----ENLYATITLHHLIITLDDV 221 (359)
T ss_dssp ------------------GTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC----TTEEEEECSGGGTCCHHHH
T ss_pred ------------------HHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc----CCceEEEechhhEEcHHHh
Confidence 12345577888888865 999999999998776666544 7899999999999999887
Q ss_pred cCCCcccccceeecCCCCCcccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh
Q 009282 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (538)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~ 405 (538)
.... .+..++++||+|...+++++|++++.|... +++|||+|++..+|.. ++ .+.|+.+++..+++.+. .+
T Consensus 222 ~~~~--~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~~--g~~Gi~~~~~~L~l~~~-~~ 293 (359)
T 3pnu_A 222 IGGK--MNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---CG--CAAGVFSAPVILPVLAE-LF 293 (359)
T ss_dssp HTSS--CCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGHHHHHHH-HH
T ss_pred cCcC--CCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---CC--CCCChhhHHHHHHHHHH-HH
Confidence 5322 247899999999999999999999999999 7999999999888753 33 46678777777777774 44
Q ss_pred hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCcc-CCeEEeeEEE
Q 009282 406 ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY-EGRRVKGKVE 479 (538)
Q Consensus 406 ~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 479 (538)
.. +++++++++..|.|||+++|+..+. | |||+||| ..|.++.+.+.++..|+|| +|..+.++|.
T Consensus 294 ~~-~~~l~~lv~~~s~nPAki~gL~~~~-----G--Adlvl~d--~~~~v~~~~~~s~~~~tPf~~G~~l~G~v~ 358 (359)
T 3pnu_A 294 KQ-NSSEENLQKFLSDNTCKIYDLKFKE-----D--KILTLEE--KEWQVPNVYEDKYNQVVPYMAGEILKFQLK 358 (359)
T ss_dssp HH-HSCHHHHHHHHTHHHHHHHTCCCSS-----C--CEEEEEC--CCEECCSCEECSSCEECCTTTTCEESCEEC
T ss_pred hh-cCCHHHHHHHHHHhHHHHhCCCCCC-----C--CeEEEEe--cCEEeCchhcccCCCccccCCCCEEEEEEe
Confidence 33 3699999999999999999995433 4 9999999 7899999999999999999 9998777764
No 48
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.5e-34 Score=300.46 Aligned_cols=366 Identities=14% Similarity=0.034 Sum_probs=233.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccC-C----------
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~---------- 120 (538)
|++++++|+.+.+ ...++++|+|+||||++||+..+ .++||++|++|+|||||+|+|+..... |
T Consensus 11 m~~l~~~~~~~~~-~~~~~~~v~I~~g~I~~Ig~~~~----~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~ 85 (458)
T 4f0l_A 11 QHFIHARQALLPD-GWAENVRIGIAGGVICSIETGVL----AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSAD 85 (458)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEEETTEEEEEECSCC----CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSS
T ss_pred hhHhhhcceeccC-ccccCceEEEECCEEEEEeCCCc----cccccCCCCEEccCceecccchhhhhhcccccccccCCC
Confidence 3457788877632 22468999999999999998653 346999999999999999999964411 0
Q ss_pred --------------CCChhhHHHH----HHHHHhCCcEEEecccCCCC-------CC----HHHHHHHHHHHhcccceee
Q 009282 121 --------------SETIDDFFSG----QAAALAGGTTMHIDFVIPIN-------GS----LTAGFEAYEKKAKNSCMDY 171 (538)
Q Consensus 121 --------------~~~~~~~~~~----~~~~l~~GvTt~~d~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~ 171 (538)
..++++++.. ...++++||||+.|+..... .. ....++...+.+.+..+..
T Consensus 86 ~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~ 165 (458)
T 4f0l_A 86 SFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLP 165 (458)
T ss_dssp TTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEec
Confidence 0123333332 33467899999999743110 01 2344555555554433322
Q ss_pred eeeee-----ee---------cCChhhHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 172 GFHMA-----IT---------KWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 172 ~~~~~-----~~---------~~~~~~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
.+... .. ...++..+.++.+.+. .+...+.+.+.++..+..+.+.++++++.|+ |+++++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~--g~~v~~H~~ 243 (458)
T 4f0l_A 166 VFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDSVTQLLP--DAPVHIHVA 243 (458)
T ss_dssp EECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTTTSCHHHHHHHTTSST--TSCEEEEES
T ss_pred chhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcCcCCHHHHHHHHHHhc--CCCEEEEeC
Confidence 21110 00 1112223333333321 2334455556667777889999999999888 999999995
Q ss_pred -ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecc
Q 009282 237 -NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 237 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
+..+.....+. +|.. .+.. +......+.++.+.|+...++ +.++++++.|+.++.||.
T Consensus 244 e~~~~~~~~~~~---~g~~----------------~~~~-l~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~~~~~p~ 302 (458)
T 4f0l_A 244 EQVKEVEDCIAW---SGKR----------------PVEW-LLDHQDVTARWCLIHATHMSD-EETKHMAKAGAIAGLCPV 302 (458)
T ss_dssp CSHHHHHHHHHH---HSSC----------------HHHH-HHHHSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEECHH
T ss_pred CCHHHHHHHHHH---hCCC----------------HHHH-HHHcCCCCCCeEEEEeccCCH-HHHHHHHHcCCeEEECcc
Confidence 44444433322 2321 1111 122233567889999998876 889999999999998887
Q ss_pred ccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhh
Q 009282 316 VSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE 395 (538)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 395 (538)
+. +..+.+. .+++.++++|+++++|||..+..+ ++. +.
T Consensus 303 s~-------------~~l~~~~------------~~~~~~~~~Gv~v~lgtD~~~~~~--------~~~---------~~ 340 (458)
T 4f0l_A 303 TE-------------ANLGDGT------------FNATEFAAAGGKFGIGSDSNVLIG--------IGD---------EL 340 (458)
T ss_dssp HH-------------HHTTCCC------------CCHHHHHHTTCEEEECCBTTSSCC--------HHH---------HH
T ss_pred cc-------------ccccCCC------------ccHHHHHHCCCeEEEECCCCCCCC--------HHH---------HH
Confidence 52 1121211 127889999999999999532211 111 22
Q ss_pred hHHHHHHHhhh--------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCC
Q 009282 396 RMHLVWDTMVE--------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTN 467 (538)
Q Consensus 396 ~~~~~~~~~~~--------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~ 467 (538)
.......+... ..+++++++|+++|.|||+++|+ ++|+|++||.|||||+|.+.++..+..++ ....
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~~~~~~---~~~~ 415 (458)
T 4f0l_A 341 RQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR--PEDGLKKGASADFVSLDVERLPHAKGDVV---LDGW 415 (458)
T ss_dssp HHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC--TTCSSSTTSBCCEEEEECTTSTTCCHHHH---HHHH
T ss_pred HHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC--CCCcCCCCCcCCEEEEeCCCCccCCcccH---HHhC
Confidence 22222222221 23599999999999999999999 48999999999999999987755432211 1122
Q ss_pred ccCCeEEeeEEEEEEECCEEEEECCeee
Q 009282 468 VYEGRRVKGKVEVTIAGGRVVWENDELN 495 (538)
Q Consensus 468 ~~~~~~~~~~v~~V~v~G~~V~~~~~~~ 495 (538)
+|.+. . +|..||++|++||++|+++
T Consensus 416 ~~~~~--~-~v~~v~v~G~~v~~~g~~~ 440 (458)
T 4f0l_A 416 IFAGR--A-HVCDVWVRGVKQVEGGRHR 440 (458)
T ss_dssp HHTSC--C-EEEEEEETTEEEEETTEET
T ss_pred eEcCC--C-CceEEEECCEEEEECCEeC
Confidence 34443 3 8999999999999999984
No 49
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=2.4e-33 Score=285.62 Aligned_cols=339 Identities=23% Similarity=0.208 Sum_probs=212.4
Q ss_pred cccEEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC---------
Q 009282 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------- 121 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~--------- 121 (538)
+++++|+|++|+++++. ..++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|++....+.
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~~~~ 82 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSDGNE 82 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-CTTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCCSCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEecccccCccccCcccccccccc
Confidence 45789999999998753 44999999999999998766 66789999999999999999999998642111
Q ss_pred --------CChhhH----HHHHHHHHhCCcEEEecccCCCCC---------CHHHHHHHHHHHhcccceeeeeeeeee--
Q 009282 122 --------ETIDDF----FSGQAAALAGGTTMHIDFVIPING---------SLTAGFEAYEKKAKNSCMDYGFHMAIT-- 178 (538)
Q Consensus 122 --------~~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (538)
.+..+. ......++++||||++++....+. ......+ ..... ...++.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~---~~~~~--~~~~i~~~~g~~ 157 (396)
T 3ooq_A 83 ATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVE---ECIVK--DPAGLKMAFGEN 157 (396)
T ss_dssp TTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHH---HHEEE--EEEEEEEECSHH
T ss_pred ccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHH---Hceec--CCcEEEEEcCCC
Confidence 111111 135778899999999998543211 0000011 11100 0011111100
Q ss_pred -----------cCCh-hhHHHHHHHHHHcCCcEEE---EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHH
Q 009282 179 -----------KWDE-VVSDEMEVMVKEKGINSFK---FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (538)
Q Consensus 179 -----------~~~~-~~~~~~~~~~~~~g~~~ik---~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~ 243 (538)
.... .....+++.... +....+ ......+. ....+...+.+..+.+.++++.+|+.....+
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~g~-~~~~~~~~e~l~~~~~~~~~v~iHa~~~~~i-- 233 (396)
T 3ooq_A 158 PKRVYGERKQTPSTRMGTAGVIRDYFTK-VKNYMKKKELAQKEGKE-FTETDLKMEVGEMVLRKKIPARMHAHRADDI-- 233 (396)
T ss_dssp HHHHHHHTTCSCSSHHHHHHHHHHHHHH-HHHHHHHHHHHHHTTCC-CCCCCHHHHHHHHHHTTSSCEEEEECSHHHH--
T ss_pred CcccccccCCCCccHHHHHHHHHHHHHH-HHHHHHhhhhhhhccCC-CCCcChhHHHHHHHHcCCCcEEEEECchhHH--
Confidence 0000 111122222110 000000 00000011 1123344445555568899999999876432
Q ss_pred HHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCc
Q 009282 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (538)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~ 323 (538)
.+++++..+.+.++.+.|+.... +.++++++.|+.++.+|.....
T Consensus 234 -----------------------------~~~~~~~~~~g~~~~i~H~~~~~--~~~~~l~~~gv~v~~~P~~~~~---- 278 (396)
T 3ooq_A 234 -----------------------------LTAIRIAEEFGFNLVIEHGTEAY--KISKVLAEKKIPVVVGPLLTFR---- 278 (396)
T ss_dssp -----------------------------HHHHHHHHHHTCCEEEEECTTGG--GGHHHHHHHTCCEEECCCSSCC----
T ss_pred -----------------------------HHHHHHHHHcCCCEEEecCchHH--HHHHHHHHCCCCEEECcccccc----
Confidence 33445556667888899998866 4588899999999988753110
Q ss_pred ccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHH
Q 009282 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (538)
Q Consensus 324 ~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~ 403 (538)
.++... .....+++.++++|++++++||++..+.. .+......
T Consensus 279 -----~~~~~~-----------~~~~~~~~~l~~~Gv~v~lgtD~~~~~~~---------------------~l~~~~~~ 321 (396)
T 3ooq_A 279 -----TKLELK-----------DLTMETIAKLLKDGVLIALMCDHPVIPLE---------------------FATVQAAT 321 (396)
T ss_dssp -----CSGGGT-----------TCCTTHHHHHHHTTCCEEECCTTTTSCGG---------------------GHHHHHHH
T ss_pred -----cchhHH-----------hhhhHHHHHHHHCCCEEEEEcCCCccCcc---------------------HHHHHHHH
Confidence 000000 01124578899999999999997533211 12222323
Q ss_pred hhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEE
Q 009282 404 MVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 483 (538)
Q Consensus 404 ~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v 483 (538)
+.. .+++++++|+++|.|||+++|+++++|+|++||.|||||||.|++.. ..+|..||+
T Consensus 322 ~~~-~gl~~~~al~~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~--------------------~~~v~~v~~ 380 (396)
T 3ooq_A 322 AMR-YGAKEEDLLKILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHPFDM--------------------KSVVERVYI 380 (396)
T ss_dssp GGG-GTCCHHHHHHTTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTST--------------------TCCEEEEEE
T ss_pred HHH-cCCCHHHHHHHHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCcccc--------------------ccceeEEEE
Confidence 334 46999999999999999999998889999999999999999876521 247999999
Q ss_pred CCEEEEECCe
Q 009282 484 GGRVVWENDE 493 (538)
Q Consensus 484 ~G~~V~~~~~ 493 (538)
+|++||+..+
T Consensus 381 ~G~~v~~~~~ 390 (396)
T 3ooq_A 381 DGVEVFRREG 390 (396)
T ss_dssp TTEEEEECC-
T ss_pred CCEEEeCCCC
Confidence 9999999754
No 50
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=100.00 E-value=2.4e-33 Score=297.53 Aligned_cols=332 Identities=19% Similarity=0.164 Sum_probs=224.5
Q ss_pred CcccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHH
Q 009282 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 128 (538)
++++++|+|++|+++.+ ...++|+|+||||++|++....+++.++||++|++|+|||||+|+|+..+ ..+++.
T Consensus 33 ~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~~~~~vID~~G~~v~PG~ID~H~Hl~~~---~~~~~~-- 107 (608)
T 3nqb_A 33 QRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHMHIESS---MITPAA-- 107 (608)
T ss_dssp SCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCCCEEEEEECTTSEEEECEEEEEECGGGG---TSCHHH--
T ss_pred CCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCeEecccCcccc---cCCHHH--
Confidence 37889999999999864 46789999999999999865434568899999999999999999999765 234443
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeee-eeec----C----ChhhHHHHHHHHHHcCCc
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM-AITK----W----DEVVSDEMEVMVKEKGIN 198 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~----~~~~~~~~~~~~~~~g~~ 198 (538)
..+.++.+||||++++...... ...+.++...+.......++.+.. ...+ . .....+++.++.+..++.
T Consensus 108 -~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~ 186 (608)
T 3nqb_A 108 -YAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIG 186 (608)
T ss_dssp -HHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEE
T ss_pred -HHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcc
Confidence 3688999999999975321111 123444444444444344433332 1111 0 112355677776556888
Q ss_pred EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHH
Q 009282 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (538)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~ 278 (538)
+++.+.++.+. ..+.+.+.+.++.|++.|+++.+|+..... ..+..+...
T Consensus 187 glgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~--~~L~~~~~a--------------------------- 236 (608)
T 3nqb_A 187 GIAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLKN--ADLNAFMAA--------------------------- 236 (608)
T ss_dssp EEEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCCH--HHHHHHHHT---------------------------
T ss_pred eeeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCCH--HHHHHHHHc---------------------------
Confidence 88887766432 236788999999999999999999975432 222222222
Q ss_pred HHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHh-
Q 009282 279 AEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALA- 357 (538)
Q Consensus 279 ~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~- 357 (538)
+.. ..|+....+ +.++.+ +.|..+... .. .. .....+..+++
T Consensus 237 ----Gv~--~~H~~~~~e-ea~e~l-~~G~~i~i~-gs-------------------~~---------~~~~~l~~~i~~ 279 (608)
T 3nqb_A 237 ----GVS--SDHELVSGE-DLMAKL-RAGLTIELR-GS-------------------HD---------HLLPEFVAALNT 279 (608)
T ss_dssp ----TCC--EECCCCSHH-HHHHHH-HTTCEEEEE-SS-------------------SG---------GGHHHHHHHHHH
T ss_pred ----CCC--eeeccCCHH-HHHHHH-HCCCEEEEe-cc-------------------cc---------ccHHHHHHHHHh
Confidence 322 368766553 555555 478776644 21 00 01122333333
Q ss_pred ---cCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCc
Q 009282 358 ---TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434 (538)
Q Consensus 358 ---~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~G 434 (538)
.|++++++||+....+... +..+...++.+++. |++++++++++|.|||++||+ +++|
T Consensus 280 ~~~~g~~v~lgTD~~~p~~~~~-----------------~g~l~~~v~~~~~~-Gls~~eal~~aT~n~A~~lgl-~~~G 340 (608)
T 3nqb_A 280 LGHLPQTVTLCTDDVFPDDLLQ-----------------GGGLDDVVRRLVRY-GLKPEWALRAATLNAAQRLGR-SDLG 340 (608)
T ss_dssp HTSCCTTEEEECBSCCHHHHHH-----------------TCSHHHHHHHHHHT-TCCHHHHHHHHTHHHHHHHTC-TTSS
T ss_pred HhhcCceEEEecCCCCCcchhh-----------------hcchHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCC-CCCc
Confidence 7999999999642111100 11344455455555 699999999999999999999 6789
Q ss_pred ccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 435 AILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 435 sI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
+|++||.||||++|.-. ..+|..||++|++|+++|+++..
T Consensus 341 ~i~~G~~ADlvv~d~l~-----------------------~~~v~~v~~~G~~v~~~g~~~~~ 380 (608)
T 3nqb_A 341 LIAAGRRADIVVFEDLN-----------------------GFSARHVLASGRAVAEGGRMLVD 380 (608)
T ss_dssp CCSTTSBCCEEEESCTT-----------------------TCCEEEEEETTEEEEETTEECSC
T ss_pred CcCCCCCccEEEECCCC-----------------------CCcceEEEECCEEEEECCeEecc
Confidence 99999999999998411 13699999999999999998753
No 51
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=1.6e-34 Score=298.49 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=221.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
+++++|+|++|++..+...++|+|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCc--
Confidence 56899999999998777789999999999999985321 3467899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCC-------CC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+. .+.++++||||+++.+... .. .....++...+......++++++..... +...++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 3678999999999643211 11 2344555555555667788888775432 346677777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|.+.++ ..+.+.++++++.|+++|+++.+|+++........+.+
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedal----------------------- 263 (570)
T 4ac7_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTL----------------------- 263 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHH-----------------------
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHH-----------------------
Confidence 7 7899999998654 35899999999999999999999998643211111111
Q ss_pred HHHHHHHHHHcCCCEEEEeccCH---HHHHHHHHHHHcCCcEEEeccc----ccc--------------ccCcccccCCC
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARKAGQRVIGEPVV----SGL--------------VLDDSWLWHSD 330 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~---~~~~~i~~~~~~g~~v~~~~~~----~~~--------------~~~~~~~~~~~ 330 (538)
+ ...+..++..|.... ...+.++.+.+.+ |.+.... +.. ++++....+..
T Consensus 264 -----e--a~~Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~ 334 (570)
T 4ac7_C 264 -----R--AINGRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVA 334 (570)
T ss_dssp -----H--HHTTCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHH
T ss_pred -----H--HhCCCcceeEeeeccccccChHHHHHhccCC--ccccccCCCCCcccchhHHhhhheeeecccCccccchhH
Confidence 1 112344454444321 1113344333333 3332210 000 00110000000
Q ss_pred cccccceeecCCCCCc-ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh----
Q 009282 331 FVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV---- 405 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~-~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~---- 405 (538)
|.. .|.. +...+.+.+++.|+.+++|||++........ + ...+........
T Consensus 335 ~a~---------~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~-----~----------~~~~~~a~~~~~~rg~ 390 (570)
T 4ac7_C 335 FAD---------SRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEM-----V----------LRTWQTADKMKKQRGP 390 (570)
T ss_dssp HHH---------HHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCH-----H----------HHHHHHHHHHHHHHCS
T ss_pred HHH---------hhhhhhhcccccchhhcCCEEEEECcccccCCcCcc-----c----------CcHHHHHHHHHHhcCC
Confidence 000 0011 1223456789999999999997643311000 0 000111000000
Q ss_pred ------hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEE
Q 009282 406 ------ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVE 479 (538)
Q Consensus 406 ------~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 479 (538)
...++++++||+++|.|||+++|+++.+|+|++||.|||||||.+++ ..+|.
T Consensus 391 l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~----------------------~~~v~ 448 (570)
T 4ac7_C 391 LAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF----------------------GVKAD 448 (570)
T ss_dssp CTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT----------------------TTSCS
T ss_pred CCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhc----------------------cCceE
Confidence 12347899999999999999999988899999999999999997643 13678
Q ss_pred EEEECCEEEEEC
Q 009282 480 VTIAGGRVVWEN 491 (538)
Q Consensus 480 ~V~v~G~~V~~~ 491 (538)
.||++|++||+.
T Consensus 449 ~t~~~G~~v~~~ 460 (570)
T 4ac7_C 449 RVIKGGIIAYAQ 460 (570)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEcc
Confidence 999999999986
No 52
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=2.7e-34 Score=296.95 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=221.3
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC------------CCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~------------~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
+++++|+|++|++..+...++|+|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCc--
Confidence 56899999999998777789999999999999985321 3467899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCC-------CC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+. .+.++++||||+++.+... .. .....++...+......++++++..... +...++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 21 3678999999999643211 11 2344555555555667788888775432 346677777
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
. +.|+.++|.+.++ ..+.+.++++++.|+++|+++.+|+++........+.+
T Consensus 212 ~-~aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedal----------------------- 263 (570)
T 4ubp_C 212 I-DAGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTL----------------------- 263 (570)
T ss_dssp H-HHTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHH-----------------------
T ss_pred H-HcCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHH-----------------------
Confidence 7 7899999998654 35899999999999999999999998643211111111
Q ss_pred HHHHHHHHHHcCCCEEEEeccCH---HHHHHHHHHHHcCCcEEEeccc----ccc--------------ccCcccccCCC
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARKAGQRVIGEPVV----SGL--------------VLDDSWLWHSD 330 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~~---~~~~~i~~~~~~g~~v~~~~~~----~~~--------------~~~~~~~~~~~ 330 (538)
+ ...+..++..|.... ...+.++.+.+.+ |.+.... +.. ++++....+..
T Consensus 264 -----e--a~~Gr~ih~~HiEgag~~hapd~i~~~~~~~--vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~ 334 (570)
T 4ubp_C 264 -----R--AINGRVIHSFHVEGAGGGHAPDIMAMAGHPN--VLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVA 334 (570)
T ss_dssp -----H--HHTTCCEEETTTTSTTSSSTTTGGGGGGSTT--EEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHH
T ss_pred -----H--HhCCCceeEEEecccccccChHHHHHhccCC--ccccccCCCCCcccchhHHhhhheeeecccCccccchhH
Confidence 0 112344444444321 1113344333333 3332210 000 00110000000
Q ss_pred cccccceeecCCCCCc-ccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhh----
Q 009282 331 FVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV---- 405 (538)
Q Consensus 331 ~~~~~~~~~~p~~r~~-~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~---- 405 (538)
|.. .|.. +...+.+.+++.|+.+++|||++........ + ...+........
T Consensus 335 ~a~---------~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~-----~----------~~~~~~a~~~~~~rg~ 390 (570)
T 4ubp_C 335 FAD---------SRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEM-----V----------LRTWQTADKMKKQRGP 390 (570)
T ss_dssp HHH---------HHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCH-----H----------HHHHHHHHHHHHHHCS
T ss_pred HHH---------hhhhhhccccccchhhcCCEEEEECcccccCCcCcc-----c----------CcHHHHHHHHHHhcCC
Confidence 000 0011 1223456789999999999997643311000 0 000111000000
Q ss_pred ------hcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEE
Q 009282 406 ------ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVE 479 (538)
Q Consensus 406 ------~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 479 (538)
...++++++||+++|.|||+++|+++.+|+|++||.|||||||.+++ ..+|.
T Consensus 391 l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~----------------------~~~v~ 448 (570)
T 4ubp_C 391 LAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFF----------------------GVKAD 448 (570)
T ss_dssp CTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGT----------------------TTSCS
T ss_pred CCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECcccc----------------------cCCee
Confidence 12347899999999999999999988899999999999999997643 13678
Q ss_pred EEEECCEEEEEC
Q 009282 480 VTIAGGRVVWEN 491 (538)
Q Consensus 480 ~V~v~G~~V~~~ 491 (538)
.||++|++||+.
T Consensus 449 ~t~~~G~~v~~~ 460 (570)
T 4ubp_C 449 RVIKGGIIAYAQ 460 (570)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEec
Confidence 999999999986
No 53
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=100.00 E-value=3.6e-33 Score=284.55 Aligned_cols=361 Identities=17% Similarity=0.185 Sum_probs=208.5
Q ss_pred cccEEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecC-CCeeecccccccccccccc-CCCCChhhHH
Q 009282 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDAT-GKFVMPGGIDPHTHLAMEF-MGSETIDDFF 128 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~-G~~v~PGlID~H~H~~~~~-~~~~~~~~~~ 128 (538)
.++++|+|++|+++++. .+++|+|+||||++|++..+..++.++||++ |++|+|||||+|+|+..+. .+..+++++.
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~ 81 (396)
T 2vhl_A 2 AESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLD 81 (396)
T ss_dssp -CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSSCCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHHH
T ss_pred CccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCCCCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHHH
Confidence 45789999999998764 5789999999999999321111246899999 9999999999999997641 1134677787
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc--c----cceeeeeeeeeec-------------CChhhHHHH
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK--N----SCMDYGFHMAITK-------------WDEVVSDEM 188 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~-------------~~~~~~~~~ 188 (538)
...+.++++||||++|+...... .....++...+... . +...++++..... ......+.+
T Consensus 82 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (396)
T 2vhl_A 82 IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELF 161 (396)
T ss_dssp HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHHH
T ss_pred HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHHH
Confidence 88899999999999998643222 12223333333322 1 1212333222111 001124456
Q ss_pred HHHHHHcCCcEEEEEe-eeCCCccCCHHHHHHHHHHHHhcCCeEEE-EcC-ChhhHHHHHHHHHHcCCCCccccc-cc-C
Q 009282 189 EVMVKEKGINSFKFFM-AYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAVFEGQKRMIELGITGPEGHA-LS-R 263 (538)
Q Consensus 189 ~~~~~~~g~~~ik~~~-~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~~-~~~~~~~~~~~~~~~g~~~~~~~~-~~-~ 263 (538)
+++. +.+.+.+|++. .+... ...++++.|+++|+++.. |+. ....+. .+.+.|.. ...|. .. .
T Consensus 162 ~~~~-~~~~~~ik~~~~~p~~~------~~~~~~~~a~~~g~~v~~gH~~~~~~~~~----~a~~~G~~-~i~H~~~~~~ 229 (396)
T 2vhl_A 162 KKWQ-QEAGGLIKIVTLAPEED------QHFELIRHLKDESIIASMGHTDADSALLS----DAAKAGAS-HMTHLYNAMS 229 (396)
T ss_dssp HHHH-HHTTTCEEEEEECGGGS------GGGHHHHHHHHTTCEEEECSBCCCHHHHH----HHHHTTCC-EESSTTSSBC
T ss_pred HHHH-HhcCCcceEEEECCCCC------CHHHHHHHHHHCCCEEeecccCCCHHHHH----HHHHcCCC-EeEeCCccCc
Confidence 6665 45666677442 22111 123667889999999988 996 343332 33445654 22222 11 1
Q ss_pred CchHHHHHHHHHHHHHHHcCCCE---EEEeccCHHHHHHHHHHHHc-CC-cEEEeccccccccCcccccCCCccccccee
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPL---YVVHVMSMDAMEEIAKARKA-GQ-RVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~---~~~h~~~~~~~~~i~~~~~~-g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (538)
+.......+ +. ......++ .+.|+..... +.++.+++. +. .+..++.. ++. . .... ..+.
T Consensus 230 ~~~~~~~G~---~~-~~~~~~~~~~e~~~h~~~l~~-~~~~~~~~~~~~~~~~~~~~~--~~~--~-----g~~~-~~~~ 294 (396)
T 2vhl_A 230 PFHHREPGV---IG-TALAHDGFVTELIADGIHSHP-LAAKLAFLAKGSSKLILITDS--MRA--K-----GLKD-GVYE 294 (396)
T ss_dssp CCCSSSCHH---HH-HHHHCTTCEEEEECSSSSSCH-HHHHHHHHHHCTTSEEEECCB--CTT--T-----TSCS-EEEE
T ss_pred ccccCCCCc---hh-hhhcCCCcEEEEcCCccccCH-HHHHHHHhhcCCccEEEECcC--hhh--c-----CCCC-ceEE
Confidence 100000000 00 00001122 3445544333 344444443 43 34443322 100 0 0000 0011
Q ss_pred ecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHH
Q 009282 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (538)
Q Consensus 339 ~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~ 418 (538)
+.| +..+.+.| .+.+ +|+ +.++.+..+...++.++...++|++++|++
T Consensus 295 ~~~----------~~~~~~~g-~~~~-~d~--------------------~~~g~~~~l~~~l~~~~~~~~~~~~~~l~~ 342 (396)
T 2vhl_A 295 FGG----------QSVTVRGR-TALL-SDG--------------------TLAGSILKMNEGARHMREFTNCSWTDIANI 342 (396)
T ss_dssp ETT----------EEEEEETT-EEEC-TTS--------------------CBCSBCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred ECC----------eEEEEECC-EEEe-CCC--------------------cccccccCHHHHHHHHHHhcCCCHHHHHHH
Confidence 111 11122334 3333 332 223333445556655666556999999999
Q ss_pred HhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeec
Q 009282 419 TSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 419 aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~ 496 (538)
+|.|||++||+++++|+|++||.|||||+|.+ .+|..||++|++||+++++-+
T Consensus 343 aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~-------------------------~~v~~v~~~G~~v~~~~~~~~ 395 (396)
T 2vhl_A 343 TSENAAKQLGIFDRKGSVTVGKDADLVIVSSD-------------------------CEVILTICRGNIAFISKEADQ 395 (396)
T ss_dssp HTHHHHHHHTCTTTSSSCCTTSBCCEEEECTT-------------------------CCEEEEEETTEEEEECSCCC-
T ss_pred HHHHHHHHhCCcCCCceeCCCCcCCEEEECCC-------------------------CcEEEEEECCEEEEecccccc
Confidence 99999999999777999999999999999966 368999999999999987643
No 54
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=100.00 E-value=1.7e-33 Score=279.56 Aligned_cols=356 Identities=17% Similarity=0.186 Sum_probs=231.6
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc--cCCCCChhhHHHHH
Q 009282 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGSETIDDFFSGQ 131 (538)
Q Consensus 55 ~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~~ 131 (538)
++|+|++|++++.. .+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|...+ +....+.+.+.+..
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~ 84 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH 84 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHH
Confidence 68999999998875 4679999999999999865545568899999999999999999997654 22335678888999
Q ss_pred HHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcc-cceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCC
Q 009282 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (538)
Q Consensus 132 ~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~ 209 (538)
+.++++||||++++....+. .+.+.++.+.+.... .....|++...+..+.+ +.|+..-.. .
T Consensus 85 ~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~----------~~Ga~~~~~------i 148 (381)
T 3iv8_A 85 KANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVM----------KKGIHSVDF------I 148 (381)
T ss_dssp HHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGG----------GCTTSCTTT------C
T ss_pred HHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHh----------hcCCCCHHH------c
Confidence 99999999999987544433 444555544443322 22345666666655542 334422111 1
Q ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEE
Q 009282 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (538)
Q Consensus 210 ~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 289 (538)
...+.++++++.+.+. ++.+...+++... .+.++.+.+.|+..+.+|+.+. +++..++++ .|.. +++
T Consensus 149 ~~p~~~~~~~~~~~~~--~i~~vTlAPE~~~-~~~i~~l~~~gi~vs~GHs~A~-----~e~~~~a~~----~Ga~-~~T 215 (381)
T 3iv8_A 149 RPSDDTMIDTICANSD--VIAKVTLAPENNK-PEHIEKLVKAGIVVSIGHTNAT-----YSEARKSFE----SGIT-FAT 215 (381)
T ss_dssp CCCCHHHHHHHHHTTT--SEEEEEECCTTSC-HHHHHHHHHTTCEEEECSBCCC-----HHHHHHHHH----TTCC-EES
T ss_pred CCCCHHHHHHHHhccC--CeEEEEECCCCCc-HHHHHHHHHCCCEEEecCCCCC-----HHHHHHHHH----cCCC-Eee
Confidence 2346777777765432 4666666655443 5677777777887777776432 233333333 3333 366
Q ss_pred eccCHH------HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceE
Q 009282 290 HVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQL 363 (538)
Q Consensus 290 h~~~~~------~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~ 363 (538)
|+.++- ..-.+-..-.. -.++++...+..+.++..+. .+.++. |-++.
T Consensus 216 HlfNaM~~~~hR~PG~vga~l~~-~~~~~elI~DG~Hv~p~~~~-----------------------~~~~~~--g~~~~ 269 (381)
T 3iv8_A 216 HLFNAMTPMVGREPGVVGAIYDT-PEVYAGIIADGFHVDYANIR-----------------------IAHKIK--GEKLV 269 (381)
T ss_dssp STTSSBCCCBTTBCHHHHHHHHC-TTCEEEEECSSSSSCHHHHH-----------------------HHHHHH--GGGEE
T ss_pred eCCCCCCCccCCCCchHHHHhcC-CCcEEEEEcCCccCCHHHHH-----------------------HHHHhc--CCEEE
Confidence 664421 00112111111 23566666666655554321 122222 46788
Q ss_pred EeCCCCCCCh---hhhhcC------ccCcccCCCC-CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCC
Q 009282 364 VGTDHCAFNS---TQKAFG------IDDFRKIPNG-VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRK 433 (538)
Q Consensus 364 lgtD~~~~~~---~~~~~~------~~~~~~~~~g-~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~ 433 (538)
+-||.....- ....++ .+.......| ++|....+...++++++..++|+++||+++|.|||+++|+++++
T Consensus 270 lvTDam~a~G~~dg~y~lgg~~v~v~~g~~~l~~g~lAGs~l~l~~~v~~~v~~~g~~~~~al~~aT~~pA~~lg~~~~~ 349 (381)
T 3iv8_A 270 LVTDATAPAGAEMDYFIFVGKKVYYRDGKCVDENGTLGGSALTMIEAVQNTVEHVGIALDEALRMATLYPAKAIGVDEKL 349 (381)
T ss_dssp EECCBCTTTTSCCSEEESSSCEEEEETTEEECTTCCBCSBCCCHHHHHHHHHHTTCCCHHHHHHHHTHHHHHHHTCTTTS
T ss_pred EEeCcccccCCCCCeeecCCeEEEEECCEEEcCCCCccChhhhHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 8898654221 111111 0111122233 56666678888888888878999999999999999999998889
Q ss_pred cccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEE
Q 009282 434 GAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490 (538)
Q Consensus 434 GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~ 490 (538)
|+|++||.||||+||.+ .+|+.||++|++||+
T Consensus 350 G~i~~G~~ADlvvld~~-------------------------~~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 350 GRIKKGMIANLTVFDRD-------------------------FNVKATVVNGQYEQN 381 (381)
T ss_dssp SSCCTTSBCCEEEECTT-------------------------CCEEEEEETTEEEEC
T ss_pred ceECCCCcCCEEEECCC-------------------------CCEEEEEECCEEeeC
Confidence 99999999999999954 268999999999984
No 55
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=100.00 E-value=8.4e-34 Score=293.97 Aligned_cols=362 Identities=14% Similarity=0.096 Sum_probs=230.4
Q ss_pred EECcEEEcCCCc-eeeeEEE-eCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCC--------------
Q 009282 57 IKGGTVVNAHHQ-QIADVYV-EDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------------- 120 (538)
Q Consensus 57 i~n~~vv~~~~~-~~~~V~I-~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~-------------- 120 (538)
|...+++.+++. ++++|+| +||+|++||+..+. ..++|++| +|+|||||+|+|+.+....
T Consensus 4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~---~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~~l~ 79 (453)
T 3mdu_A 4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA---DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFW 79 (453)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC---TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTCCHH
T ss_pred cchhheecCCceecCeEEEEecCCEEEEecCCCCc---ccccccCC-cccccceecccchHHHhhccccccccCCCCcHH
Confidence 445667777764 7899999 89999999987543 34579999 9999999999999654211
Q ss_pred -----------CCChhhHHHHH----HHHHhCCcEEEecccCCCC-------C----CHHHHHHHHHHHhcccceeeeee
Q 009282 121 -----------SETIDDFFSGQ----AAALAGGTTMHIDFVIPIN-------G----SLTAGFEAYEKKAKNSCMDYGFH 174 (538)
Q Consensus 121 -----------~~~~~~~~~~~----~~~l~~GvTt~~d~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~ 174 (538)
..++++++..+ ..++++||||+.|+..... . ......++..+.+.+..+...+.
T Consensus 80 ~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~ 159 (453)
T 3mdu_A 80 TWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLY 159 (453)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEECBC
T ss_pred HHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEecchh
Confidence 12444444333 3368899999999743110 1 12345555555555533321111
Q ss_pred e--ee------------ecCChhhHHHHHHHHH---HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc-C
Q 009282 175 M--AI------------TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (538)
Q Consensus 175 ~--~~------------~~~~~~~~~~~~~~~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~-~ 236 (538)
. .. ....++..+.+..+.. ..+. .+.+.+++.+.++++.++++++.|+ .|+++++|+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e 235 (453)
T 3mdu_A 160 SHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHSLRAVTPQQIATVLAAGH-DDLPVHIHIAE 235 (453)
T ss_dssp CBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEETTTSCHHHHHHHHTSSC-TTSCEEEEESC
T ss_pred ccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCCCCcCCHHHHHHHHHHHh-cCCCEEEEeCC
Confidence 1 00 0111222333333321 1232 4445666667889999999999999 999999997 5
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccc
Q 009282 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (538)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~ 316 (538)
+..+.....+. .|.. .++.+ ......+.++.+.|+...++ +.++++++.|+.++.||.+
T Consensus 236 ~~~e~~~~~~~---~g~~----------------~v~~l-~~~g~~~~~~~~~H~~~~~~-~~i~~la~~g~~v~~~P~s 294 (453)
T 3mdu_A 236 QQKEVDDCQAW---SGRR----------------PLQWL-YENVAVDQRWCLVHATHADP-AEVAAMARSGAVAGLCLST 294 (453)
T ss_dssp SHHHHHHHHHH---HSSC----------------HHHHH-HHHSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEECHHH
T ss_pred CHHHHHHHHHH---hCCC----------------HHHHH-HHcCCCCCCeEEEEcCCCCH-HHHHHHHHcCCEEEECchh
Confidence 55444433322 2321 11222 22234567889999998877 8899999999999988874
Q ss_pred cccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhh
Q 009282 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 396 (538)
. +..+.+. +| ++.++++|+++++|||.....+. +. ++.
T Consensus 295 n-------------~~lg~g~---~p---------~~~~~~~Gv~v~lgtD~~~~~~~--------~~---------~~~ 332 (453)
T 3mdu_A 295 E-------------ANLGDGI---FP---------ATDFLAQGGRLGIGSDSHVSLSV--------VE---------ELR 332 (453)
T ss_dssp H-------------HHTTCCC---CC---------HHHHHHTTCEEEECCBTCSCCCH--------HH---------HHH
T ss_pred H-------------hhcCCCC---CC---------HHHHHHCCCEEEEECCCCCCCCH--------HH---------HHH
Confidence 2 2222221 12 78899999999999996422111 11 222
Q ss_pred HHHHHHHhhh---------cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceee--ccCcccCCCC
Q 009282 397 MHLVWDTMVE---------SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEI--TARSHHSRLD 465 (538)
Q Consensus 397 ~~~~~~~~~~---------~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~--~~~~~~~~~~ 465 (538)
......+... ..+++++++|+++|.|||+++|+ ++|+|++||.|||||+|.+.++.. +..++. .
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~--~~G~l~~G~~AD~~~~d~~~~~~~~~~~~~~~---~ 407 (453)
T 3mdu_A 333 WLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ--PIGSLAVGRRADLLVLDGNDPYLASAEGDALL---N 407 (453)
T ss_dssp HHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS--SCSSCCTTSBCCEEEECTTCHHHHTCCHHHHH---H
T ss_pred HHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC--CCCccCCCCcCCEEEEeCCCccccCCCccChH---H
Confidence 2222222211 12699999999999999999999 689999999999999998866433 111110 0
Q ss_pred CCccCCeEEeeEEEEEEECCEEEEECCeeec
Q 009282 466 TNVYEGRRVKGKVEVTIAGGRVVWENDELNV 496 (538)
Q Consensus 466 ~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~ 496 (538)
...|.+. ..+|..||++|++||++|+++.
T Consensus 408 ~~~~~~~--~~~v~~v~v~G~~v~~~g~~~~ 436 (453)
T 3mdu_A 408 RWLFAGG--DRQVRDVMVAGRWVVRDGRHAG 436 (453)
T ss_dssp HHHHHCC--GGGEEEEEETTEEEEBTTBCTT
T ss_pred HheeeCC--CCCeeEEEECCEEEEECCccCC
Confidence 1112221 2579999999999999999863
No 56
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=100.00 E-value=1.5e-33 Score=285.88 Aligned_cols=352 Identities=15% Similarity=0.163 Sum_probs=206.6
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccc--cCC---CCChhhHH
Q 009282 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMG---SETIDDFF 128 (538)
Q Consensus 55 ~~i~n~~vv~~~~~-~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~--~~~---~~~~~~~~ 128 (538)
++|+|++|+++++. ++++|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+... +.. ..+++.++
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~ 81 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLE 81 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCCccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHH
Confidence 68999999998764 5789999999999999765444457899999999999999999998643 111 12566666
Q ss_pred HHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHH----hcccceeeeeeeee--ec-----CCh---hh-HHHHHHHH
Q 009282 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK----AKNSCMDYGFHMAI--TK-----WDE---VV-SDEMEVMV 192 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~-----~~~---~~-~~~~~~~~ 192 (538)
..++.++++||||++|+...... ...+.+....+. +.+ .+......+. .. ..+ +. .+.++ +.
T Consensus 82 ~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 159 (382)
T 1yrr_A 82 IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQ-ALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD-FL 159 (382)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTS-BCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-HH
T ss_pred HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCc-eeEEEEeCCcCCccccCCCCHHHccCCCHHHHH-HH
Confidence 77888999999999998643322 122222222222 222 1111111100 00 000 11 33444 44
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE-EcC-ChhhHHHHHHHHHHcCCCCcccccccCCc-hH-H
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAVFEGQKRMIELGITGPEGHALSRPP-LL-E 268 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~-~ 268 (538)
..+.+.+|.+.- .+.+.+.++++.|+++|+++++ |+. +..++... .+.|....+.-....+. .. +
T Consensus 160 -~~~~~~ik~~~~------~~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~----~~~G~~~~~h~~~~~~~~~~~~ 228 (382)
T 1yrr_A 160 -CENADVITKVTL------APEMVPAEVISKLANAGIVVSAGHSNATLKEAKAG----FRAGITFATHLYNAMPYITGRE 228 (382)
T ss_dssp -HHTTTTEEEEEE------CGGGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHH----HHHTCCEESSTTTTSCCBCSSC
T ss_pred -HhcCCCEEEEEE------CCCCChHHHHHHHHHCCCEEEEECCCCCHHHHHHH----HHcCCCeeEECCCCCCccccCC
Confidence 557788887521 1124455789999999999998 996 44443333 34565433211111110 00 0
Q ss_pred HHHHHHHHHHHHHcCCC-EEEEeccCHHHHHHHHHHHHcC-CcEEEeccccccccCcccccCCCcccccceeecCCCCCc
Q 009282 269 GEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAG-QRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS 346 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~-~~~~h~~~~~~~~~i~~~~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 346 (538)
...+...+ ...+.. ..+.|+..... +.++.+++.+ ..+..++.. ..... .. . ..+.+.
T Consensus 229 ~g~~~~~l---~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~~~d~--~~~~g---~~----~-~~~~~~------ 288 (382)
T 1yrr_A 229 PGLAGAIL---DEADIYCGIIADGLHVDY-ANIRNAKRLKGDKLCLVTDA--TAPAG---AN----I-EQFIFA------ 288 (382)
T ss_dssp CHHHHHHH---HCTTCEEEEECSSSSSCH-HHHHHHHHHHGGGEEEECCB--CTTTT---SC----C-SEEEET------
T ss_pred cchhhHhh---cCCcceeeecCcccccCH-HHHHHHHHcCCCcEEEECcC--hHhcC---CC----C-ceEEEC------
Confidence 00000011 000111 14667765544 6666666665 344433221 10000 00 0 011100
Q ss_pred ccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHH
Q 009282 347 GHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECAR 425 (538)
Q Consensus 347 ~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~ 425 (538)
.+..+++.|+.+ ..|||... ...+...++.++...++|++++|+++|.|||+
T Consensus 289 ----~~~~~~~~Gv~~~~~Gt~~g~-----------------------~~~~~~~~~~~~~~~g~~~~~al~~aT~~~A~ 341 (382)
T 1yrr_A 289 ----GKTIYYRNGLCVDENGTLSGS-----------------------SLTMIEGVRNLVEHCGIALDEVLRMATLYPAR 341 (382)
T ss_dssp ----TEEEEECSSCEECTTCCEEEB-----------------------CCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHH
T ss_pred ----CEEEEEECCEEEeCCCcCcCC-----------------------ccCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 023456678766 33444211 01122233344433469999999999999999
Q ss_pred HcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC
Q 009282 426 IFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491 (538)
Q Consensus 426 ~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~ 491 (538)
++|+++++|+|++||.|||||+|.|+ +|..||++|++||++
T Consensus 342 ~lg~~~~~G~i~~G~~ADlvvld~~~-------------------------~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 342 AIGVEKRLGTLAAGKVANLTAFTPDF-------------------------KITKTIVNGNEVVTQ 382 (382)
T ss_dssp HTTCTTTSSSCCTTSBCCEEEECTTS-------------------------CEEEEEETTEEEEEC
T ss_pred HhCCCCCCCccCCCCCCCEEEECCCC-------------------------CEEEEEECCEEEEeC
Confidence 99998889999999999999999762 589999999999975
No 57
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=100.00 E-value=4.8e-35 Score=317.17 Aligned_cols=366 Identities=15% Similarity=0.176 Sum_probs=213.9
Q ss_pred cccEEEECcEEEcCCCceeeeEEEeCCEEEEecCC------------CCCCCCceEEecCCCeeeccccccccccccccC
Q 009282 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN------------INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~------------~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~ 119 (538)
..|++|+|++|+|+++...+||+|+||||++||+. ...++++++||++|++|+|||||+|+|+..+
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P-- 413 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICP-- 413 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCC--
Confidence 56899999999999988899999999999999952 2345688999999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC--------CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+ ....++++||||+++.+..... .................+++++......... ..+.++
T Consensus 414 ~---------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~~~~~vn~g~~~~~~~~~~---~~L~el 481 (840)
T 4gy7_A 414 Q---------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNFGFTGKGSSSKP---DELHEI 481 (840)
T ss_dssp H---------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHTTTSSSEEEEEEECCCSSS---HHHHHH
T ss_pred C---------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhhhcceeEEEEeCCCCcccH---HHHHHh
Confidence 1 1345688999999976432211 2233333344444445666666554433333 345555
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc-CCCCcccccccCCchHHHH
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL-GITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 270 (538)
. ..|+..+|.+..+ ..+.+.+...++.+++++.++.+|.+.........+.+... +......|....... .
T Consensus 482 ~-~aGa~g~K~~~~~----~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e~~~~~-~-- 553 (840)
T 4gy7_A 482 I-KAGAMGLKLHEDW----GSTPAAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSEGAGGG-H-- 553 (840)
T ss_dssp H-HHTCSEEEEETTT----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSC-S--
T ss_pred h-hceeeEEEecccc----CCCHHHHHHHHHHHHHhCCEEEEeccCcchhHHHHHHHHhhcCCcccceeccccccc-c--
Confidence 5 6799999987543 45788999999999999999999996644322222221111 111111111000000 0
Q ss_pred HHHHHHHHHHHcCCCEEEEec--cC----HH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCC
Q 009282 271 ATTRAIRLAEFVNTPLYVVHV--MS----MD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h~--~~----~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 343 (538)
+..+....+....+.+. .. .. ..+.+..... .+++ ..... ....+...++.
T Consensus 554 ----A~dii~~~~~a~~l~~~t~~~~~~~~~~~~e~l~~~~~----------~~~l--~~~i~------ed~~~~~s~~~ 611 (840)
T 4gy7_A 554 ----APDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDMLMV----------CHHL--DREIP------EDLAFAHSRIR 611 (840)
T ss_dssp ----TTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHHHHH----------HTTC--CTTSH------HHHHHHHHHSC
T ss_pred ----chHHHHHhhcccceeeEeeccchhhhhhhhhhheeEEe----------eecc--Cccch------hhhhhccCcCC
Confidence 00000111111111111 00 00 0011111100 0111 00000 00111111111
Q ss_pred CCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHH------hhhcCCCCHHHHHH
Q 009282 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT------MVESGQISVTDYVR 417 (538)
Q Consensus 344 r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~------~~~~~~ls~~eal~ 417 (538)
+ ........+.+.|+..+++||+.+.....+.. ...+ .......... .+..+++++++||+
T Consensus 612 ~--~~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~-----~~~~------~~a~~~~~~~g~~~~e~~~~~~Lsl~eAIr 678 (840)
T 4gy7_A 612 K--KTIAAEDVLNDIGAISIISSDSQAMGRVGEVI-----SRTW------QTADKMKAQTGPLKCDSSDNDNFRIRRYIA 678 (840)
T ss_dssp H--HHHHHHHHHHHTTSSCEEECCBTTTBCGGGHH-----HHHH------HHHHHHHHHHCSCTTSCSSCCHHHHHHHHH
T ss_pred c--cchhHHHHHHhCCCeEEEeccccccccccccc-----hhhh------cccccchhhcccchhhhhhcCCCCHHHHHH
Confidence 1 11122234556699999999988765443211 0000 0000000000 11345689999999
Q ss_pred HHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC-Ceeec
Q 009282 418 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-DELNV 496 (538)
Q Consensus 418 ~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~-~~~~~ 496 (538)
++|+|||++||+++++|||++||.|||||||+..+ ..+++.|+++|++||-. |....
T Consensus 679 ~aTiNPAraLGLddr~GSIEpGK~ADLVLfDPa~F----------------------GvKPe~Vik~G~Iv~~~~gd~~~ 736 (840)
T 4gy7_A 679 KYTINPAIANGFSQYVGSVEVGKLADLVMWKPSFF----------------------GTKPEMVIKGGMVAWADIGDPNA 736 (840)
T ss_dssp TTTHHHHHHHTCTTTSSSSCTTSBCCEEEECGGGT----------------------TTCCSEEEETTEEEEEEECCTTS
T ss_pred HHHHHHHHHhCCCCCccccCCCCcceEEEECchHc----------------------CCCCeEEEECCEEEEcCCCCCCc
Confidence 99999999999999999999999999999996543 34789999999999853 55554
No 58
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=100.00 E-value=9.3e-32 Score=273.49 Aligned_cols=355 Identities=21% Similarity=0.246 Sum_probs=208.0
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCEEEEecCCCCC--CCCceEEecCCCeeeccccccccccccccCCCCC--hhhHH
Q 009282 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSET--IDDFF 128 (538)
Q Consensus 53 ~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~~~~--~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~--~~~~~ 128 (538)
..++|+|++|++++...+++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+.... +... .....
T Consensus 8 ~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~-~~~~~~~~~~~ 86 (390)
T 1onw_A 8 GFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGG-GEAGPTTRTPE 86 (390)
T ss_dssp CCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTSSSSCEEEECTTCEEEECEEEEEECTTCCB-CTTSGGGBCCC
T ss_pred ceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCCCCCCeEEeCCCCEECcCeeEeeECccccC-ccccccccCHH
Confidence 4689999999998766678999999999999975432 23568999999999999999999985331 1100 01111
Q ss_pred HHHHHHHhCCcEEEecccCCCCC--CH---HHHHHHHHHHhcccceeeeeee-eeecCChhhHHHHHHHHHHcCCcEEEE
Q 009282 129 SGQAAALAGGTTMHIDFVIPING--SL---TAGFEAYEKKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSFKF 202 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ik~ 202 (538)
...+.++++||||++++...... .. ....+...+.+.+.....+.+. .............. .. .....+++
T Consensus 87 ~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~~g~~~ 163 (390)
T 1onw_A 87 VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVA-II--DRVIGVKC 163 (390)
T ss_dssp CCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHHH-HC--TTEEEEEE
T ss_pred HHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchhh-hH--HHhhccee
Confidence 23677899999999998643221 11 1222222222222111111110 00111111111111 11 11122355
Q ss_pred EeeeCCCccCCHHHHHHHHHHHHhcCC------eEEEEc-CChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 203 FMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
.+.+...+..+.++++++++.++..+. .+.+|. ++....+... .+.+.|....
T Consensus 164 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~-~~~~~g~~~v------------------- 223 (390)
T 1onw_A 164 AISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIY-DLLENCDVPI------------------- 223 (390)
T ss_dssp EESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHH-HHHHTCCCCG-------------------
T ss_pred eecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHH-HHHhccCCce-------------------
Confidence 555555556788999998888775543 367787 3333332222 2222222110
Q ss_pred HHHHHHcCCCEEEEeccCHHHH--HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHH
Q 009282 276 IRLAEFVNTPLYVVHVMSMDAM--EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQ 353 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~~~~--~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~ 353 (538)
..++..|+...... +.++.+++.+...+.+.. .|+ ....+.++
T Consensus 224 --------~~l~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~---~~~~~~l~ 268 (390)
T 1onw_A 224 --------SKLLPTHVNRNVPLFEQALEFARKGGTIDITSSI------------------------DEP---VAPAEGIA 268 (390)
T ss_dssp --------GGEEEECGGGSHHHHHHHHHHHHTTCCEEEETTC------------------------CSS---SCHHHHHH
T ss_pred --------EEeeccccccCHHHHHHHHHHHhcCCcccccccc------------------------CCC---CcCHHHHH
Confidence 01123565322211 344445544432222111 111 13457789
Q ss_pred HHHhcCCc---eEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 354 AALATGIL---QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 354 ~~l~~Gv~---~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.+++.|+. ++++||+.+..+.... .....+.|..+....+.... .++...++|++++++++|.|||++||+
T Consensus 269 ~~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~t~npA~~~gl- 342 (390)
T 1onw_A 269 RAVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETLLETVQ-VLVKDYDFSISDALRPLTSSVAGFLNL- 342 (390)
T ss_dssp HHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHH-HHHHHHCCCHHHHHGGGTHHHHHHTTC-
T ss_pred HHHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHHHHHHH-HHHHHcCCCHHHHHHHHhHHHHHHhCC-
Confidence 99999984 7999998654221100 01112345555444444433 556556799999999999999999999
Q ss_pred CCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeecc
Q 009282 431 PRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVV 497 (538)
Q Consensus 431 ~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~ 497 (538)
+++|+|++|+.|||||+|.+ . .|..||++|++|+++|+++..
T Consensus 343 ~~~G~i~~G~~ADlvv~d~~-~------------------------~v~~v~~~G~~v~~~g~~~~~ 384 (390)
T 1onw_A 343 TGKGEILPGNDADLLVMTPE-L------------------------RIEQVYARGKLMVKDGKACVK 384 (390)
T ss_dssp TTCSSCCTTSBCCEEEECTT-C------------------------CEEEEEETTEEEEETTEESSC
T ss_pred CCCcccCCCCcCCEEEEcCC-C------------------------cEEEEEECCEEEEECCeEccc
Confidence 56899999999999999965 1 478999999999999998853
No 59
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=1.4e-32 Score=287.31 Aligned_cols=329 Identities=17% Similarity=0.185 Sum_probs=213.3
Q ss_pred cEEEECcEEEcCCCc--eeeeEEEeCCEEEEecCCCCC-----CCCceEEecCCCeeeccccccccccccc--------c
Q 009282 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINV-----GDDVKVLDATGKFVMPGGIDPHTHLAME--------F 118 (538)
Q Consensus 54 ~~~i~n~~vv~~~~~--~~~~V~I~~grI~~Vg~~~~~-----~~~~~vID~~G~~v~PGlID~H~H~~~~--------~ 118 (538)
+++|+|++|+|+++. ...+|+|+||||++||+..+. ++++++||++|++|+|||||+|+|+... +
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 489999999998765 478999999999999986432 3467899999999999999999996542 0
Q ss_pred C------------------------------------------------------------------CC-----------
Q 009282 119 M------------------------------------------------------------------GS----------- 121 (538)
Q Consensus 119 ~------------------------------------------------------------------~~----------- 121 (538)
. |.
T Consensus 117 ~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~tG 196 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTG 196 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETTTT
T ss_pred CCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCCCc
Confidence 0 00
Q ss_pred -----------------C-ChhhH----HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec
Q 009282 122 -----------------E-TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (538)
Q Consensus 122 -----------------~-~~~~~----~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (538)
. +.+.. ....+.+.+.|||++.|+... ....+.++...+.+ ...+.+..+...
T Consensus 197 ~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~--~~~~~~~~~l~~~g-~l~~rv~~~~~~-- 271 (534)
T 3icj_A 197 IVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG--EKALKALFELEREG-RLKMNVFAYLSP-- 271 (534)
T ss_dssp EEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC--HHHHHHHHHHHHTT-CCCSEEEEEECG--
T ss_pred eeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC--HHHHHHHHHHHhCC-CCcEEEEEecCH--
Confidence 0 11111 223445678999999998643 12233333333322 233333322211
Q ss_pred CChhhHHHHHHHHH------HcCCcEEEEEeee-------------------CCCccCCHHHHHHHHHHHHhcCCeEEEE
Q 009282 180 WDEVVSDEMEVMVK------EKGINSFKFFMAY-------------------KGSFMINDELLIEGFKRCKSLGALAMVH 234 (538)
Q Consensus 180 ~~~~~~~~~~~~~~------~~g~~~ik~~~~~-------------------~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (538)
+..+++.+... .....++|+|.+. .|.+.++.++++++++.|+++|+++.+|
T Consensus 272 ---~~~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v~~H 348 (534)
T 3icj_A 272 ---ELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVH 348 (534)
T ss_dssp ---GGHHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEEEEE
T ss_pred ---HHHHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 22333332210 0124567888663 2334578999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEec
Q 009282 235 AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEP 314 (538)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~ 314 (538)
+.++..++..++...+. +.+..+.|+...++ +.++++++.|+.++.+|
T Consensus 349 a~gd~ai~~~l~a~~~~-------------------------------~~r~~ieH~~~~~~-e~i~~la~~gv~~~~~P 396 (534)
T 3icj_A 349 AIGDKAVDVALDAFEEA-------------------------------EFSGRIEHASLVRD-DQLERIKELKVRISAQP 396 (534)
T ss_dssp ECSHHHHHHHHHHHHHH-------------------------------TCCCEEEECCBCCH-HHHHHHHHHTCEEEECT
T ss_pred EcChHHHHHHHHHHHhc-------------------------------cCCCEEEECCCCCH-HHHHHHHHcCCeEEEcc
Confidence 98876665555443221 25668999998887 89999999999888777
Q ss_pred cccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchh
Q 009282 315 VVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIE 394 (538)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~ 394 (538)
..... +. ... ..+.. ...... .+++.++++ +++++|||.+..+.+ ||..
T Consensus 397 ~~~~~--~~-~~~-~~lg~-~r~~~~---------~p~~~l~~~-v~valGSD~p~~~~~-------p~~~--------- 445 (534)
T 3icj_A 397 HFIVS--DW-WIV-NRVGE-ERAKWA---------YRLKTLSSI-TKLGFSTDSPIEPAD-------PWVS--------- 445 (534)
T ss_dssp THHHH--CT-THH-HHHHH-HHGGGB---------TCHHHHHHH-SCEEECCTTTTSCCC-------HHHH---------
T ss_pred ccccc--hh-HHH-HhhCH-HHHhcc---------HHHHHHHHh-CCEEeecCCCCCCCC-------HHHH---------
Confidence 64221 10 000 00000 000001 227889999 999999997533211 2211
Q ss_pred hhHHHHHH--HhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeec
Q 009282 395 ERMHLVWD--TMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEIT 456 (538)
Q Consensus 395 ~~~~~~~~--~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~ 456 (538)
+..... .+....++|++|||+++|.|+|+++|++ ++|+|++||.|||||+|.|++..++
T Consensus 446 --~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~~~ 506 (534)
T 3icj_A 446 --IDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPLKEMK 506 (534)
T ss_dssp --HHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC---
T ss_pred --HHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCC-CCeEECCCCCcCEEEECCChhhccc
Confidence 111111 1223456999999999999999999998 9999999999999999999876553
No 60
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=100.00 E-value=8.9e-33 Score=283.71 Aligned_cols=342 Identities=14% Similarity=0.056 Sum_probs=203.9
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccccC-------
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM------- 119 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~~~------- 119 (538)
+++++|+|++|++++. ..+++|+|+||||++||+.... +++.++||++ ++|+|||||+|+|+.....
T Consensus 36 ~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~~ 114 (420)
T 2imr_A 36 HTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALPY 114 (420)
T ss_dssp CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCHH
T ss_pred cccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCCH
Confidence 4578999999999874 3578999999999999975321 1357899999 9999999999999975310
Q ss_pred -CC-----------CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHH-HHHHhcccceeeeeeeeeecC-ChhhH
Q 009282 120 -GS-----------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKW-DEVVS 185 (538)
Q Consensus 120 -~~-----------~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (538)
.. .++.......+.++++||||++|+... ...++. ..+.+.+....+++.. .... ..+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~g~r~~~~~~~~~-~~~~~~~~~~ 188 (420)
T 2imr_A 115 FQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA-----PEVMDALLAREDLSGTLYFEVLN-PFPDKADEVF 188 (420)
T ss_dssp HHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS-----HHHHHHHHTCTTCCEEEEEEECB-CCGGGHHHHH
T ss_pred HHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC-----HHHHHHHHHhcCcEEEEEeeecC-CCchhhHHHH
Confidence 00 001122345677899999999998632 122221 1112222222222211 1100 01122
Q ss_pred HHHHHHHHH---cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCC-------
Q 009282 186 DEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGIT------- 254 (538)
Q Consensus 186 ~~~~~~~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~------- 254 (538)
.+..++.+. .+...++++..+++....+.+.++++++.|+++|+++.+|+.+. ..+....+ ..|..
T Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~---~~g~~~~~~~~~ 265 (420)
T 2imr_A 189 AAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRT---GGGPLWDNRMPA 265 (420)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHH---SCSTTGGGSCGG
T ss_pred HHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH---hhcccccccccc
Confidence 333333322 23456788877777777899999999999999999999999543 33333221 11111
Q ss_pred -Cccccc--ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCc
Q 009282 255 -GPEGHA--LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (538)
Q Consensus 255 -~~~~~~--~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 331 (538)
.+..+. ..++.......++.+ +.....+.+..+.|+...+. +.++.+++.|+.+..||....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~~~~i~H~~~l~~-~~i~~l~~~g~~~~~~p~~~~------------- 330 (420)
T 2imr_A 266 LYPHTLAEVIGREPGPDLTPVRYL-DELGVLAARPTLVHMVNVTP-DDIARVARAGCAVVTCPRSNH------------- 330 (420)
T ss_dssp GSCSSHHHHHTSCCCTTCCHHHHH-HHHTCGGGCCEEEECCSCCH-HHHHHHHHHTCCEEECHHHHH-------------
T ss_pred chhhhhhhhccccccCCCCHHHHH-HHcCCCCCCeEEEecCcCCH-HHHHHHHHcCCeEEECHHHHH-------------
Confidence 000000 000000000011111 11222344556788876655 778888888987776654311
Q ss_pred ccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh-cCCC
Q 009282 332 VTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQI 410 (538)
Q Consensus 332 ~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~-~~~l 410 (538)
..+. ..|+ ++.++++|+++++|||+.+.+.... +...++.++. ..++
T Consensus 331 ~~~~---~~~~---------l~~~~~~Gv~~~lgtD~~~~~~~~~--------------------~~~~~~~~~~~~~~l 378 (420)
T 2imr_A 331 HLEC---GTFD---------WPAFAAAGVEVALGTDSVASGETLN--------------------VREEVTFARQLYPGL 378 (420)
T ss_dssp HTTC---CCCC---------HHHHHHTTCCEEECCCCHHHHSCSC--------------------THHHHHHHHHHCTTS
T ss_pred Hhcc---CCCC---------HHHHHHCCCeEEEECCCCccCCCCC--------------------HHHHHHHHHhcCCCC
Confidence 1111 1233 6789999999999999853211100 0111112222 2579
Q ss_pred CHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCC
Q 009282 411 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNS 451 (538)
Q Consensus 411 s~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~ 451 (538)
|++++|+++|.|||+++|+++++|+|++||.||| |+|+++
T Consensus 379 s~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 379 DPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp CHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred CHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 9999999999999999999878999999999999 777663
No 61
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.98 E-value=2.6e-31 Score=264.40 Aligned_cols=330 Identities=14% Similarity=0.132 Sum_probs=245.0
Q ss_pred CCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhc-ccc--eeeeee
Q 009282 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSC--MDYGFH 174 (538)
Q Consensus 99 ~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~ 174 (538)
++++|+|||||+|+|+..+ ......++++++||||+++|....+. ...+.++.+.+... ... +++.++
T Consensus 4 ~~~~v~PG~ID~HvH~~~g--------~~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRDG--------DMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPL 75 (347)
T ss_dssp CCEEEEECCCEEEECCCSH--------HHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEE
T ss_pred CCeEECCCcceeeecCCCC--------CchhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEE
Confidence 5689999999999998652 11223478899999999999743332 33444544444332 223 333333
Q ss_pred eeeecCChhhHHHHHHHHHHcCC-cEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHH
Q 009282 175 MAITKWDEVVSDEMEVMVKEKGI-NSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (538)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~-~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~ 249 (538)
.......+...+++..+. +.|+ .++|+|+.+. +....+.+.++++++.+++.|.++.+|+++....
T Consensus 76 ~~~~~~~~~~~~ei~~l~-~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~-------- 146 (347)
T 2z26_A 76 MTCYLTDSLDPNELERGF-NEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD-------- 146 (347)
T ss_dssp EEEECCTTCCHHHHHHHH-HTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT--------
T ss_pred EEEEeCCCCCHHHHHHHH-HCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc--------
Confidence 333222222367788777 6897 7999998864 2334578999999999999999999999865310
Q ss_pred HcCCCCcccccccCCchHHHHHHHHHH--HHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccccc
Q 009282 250 ELGITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (538)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~i~~~l--~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (538)
+ .+...|...+.+.+ .+++..+.++|+.|+++...++.++. .+..|+++.++|++.++++.+.
T Consensus 147 ---~---------~~~~~E~~~~~~~i~~~la~~~~~~~hi~Hvst~~~~~~i~~---ak~~Vt~e~~ph~L~l~~~~~~ 211 (347)
T 2z26_A 147 ---I---------DIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRD---GNERLAATITPQHLMFNRNHML 211 (347)
T ss_dssp ---S---------CGGGHHHHHHHHTHHHHHHHSTTCCEEECSCCSHHHHHHHHT---SCTTEEEEECHHHHHCCHHHHH
T ss_pred ---c---------CHHHHHHHHHHHHHHHHHHhhcCCcEEEEECCcHHHHHHHHH---hCCCceEeecchHheecHHHhc
Confidence 0 01112445566666 57788899999999999766555544 3468999999999999988775
Q ss_pred CCCcccccceeecCCCCCcccHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhh
Q 009282 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE 406 (538)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~-~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 406 (538)
... .+..++++||+|...+++.+++++..|... +++|||.|+....+.. ++. +.|+.+++..++.++. .+
T Consensus 212 ~~~--~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~~~-~~- 282 (347)
T 2z26_A 212 VGG--VRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSYAT-VF- 282 (347)
T ss_dssp TTS--BCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHHHH-HH-
T ss_pred CcC--CCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHHHH-Hh-
Confidence 322 347889999999999999999999999998 8999999998876643 222 4777787888888874 44
Q ss_pred cCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCcc-CCeEEeeEEE
Q 009282 407 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVY-EGRRVKGKVE 479 (538)
Q Consensus 407 ~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ 479 (538)
.+++|++++++..|.|||++||+.+++|+| +|+ +..+.++.+.+.++..|+|| +|+.+.++|.
T Consensus 283 ~~~~sl~~~v~~~s~nPAki~gl~~~kG~i--------~l~--~~~~~v~~~~~~s~~~~sPf~~G~~l~g~v~ 346 (347)
T 2z26_A 283 EEMNALQHFEAFCSVNGPQFYGLPVNDTFI--------ELV--REEQQVAESIALTDDTLVPFLAGETVRWSVK 346 (347)
T ss_dssp HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE--------EEE--CCCEECCSCEECSSSEECCTTTTCEESCEEC
T ss_pred hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE--------EEE--cceEEEchhhccccCCcccccCCcEEEeEEe
Confidence 356899999999999999999996567875 677 66799998889999999999 7998777764
No 62
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.97 E-value=1.3e-30 Score=262.99 Aligned_cols=352 Identities=16% Similarity=0.141 Sum_probs=194.8
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCEEEEecCCCCC-CCCceEEecCCCeeeccccccccccccccCCC-C----Ch
Q 009282 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-E----TI 124 (538)
Q Consensus 54 ~~~i~n~~vv~~~~---~~~~~V~I~~grI~~Vg~~~~~-~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~-~----~~ 124 (538)
.++|+|++|+|+.+ .++++|+|+||||++||+..+. ++++++||++|++|+|||||+|+|+....... . ..
T Consensus 3 ~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3mtw_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSC
T ss_pred cEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCCCCCCEEEECCCCEEEeChheeeeCCccccccCcccccccc
Confidence 36899999999864 3689999999999999986543 56789999999999999999999987651110 0 01
Q ss_pred hhHH-----HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc-cceee--eeeee-----------------eec
Q 009282 125 DDFF-----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SCMDY--GFHMA-----------------ITK 179 (538)
Q Consensus 125 ~~~~-----~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~-----------------~~~ 179 (538)
.... ......+..|+|+..+....... ............. ..... +.... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T 3mtw_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAADYD--DVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNP 160 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCSTTH--HHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCT
T ss_pred HHHHhhhhhhhhhhccccccceeecccccccc--chhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 1111 11234567899999877543321 1111111111111 00000 00000 000
Q ss_pred CC----hhhHHHHHHHHHHcCCcEEEEEeee--------CCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 180 WD----EVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 180 ~~----~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
.. .+......... ..+....+..... ........+.+.++++.|++.+.++..|...........
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-- 237 (403)
T 3mtw_A 161 FNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAV-- 237 (403)
T ss_dssp TCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHH--
T ss_pred cccchhHHHhhhhHhhh-hhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhHHHHH--
Confidence 00 11122222222 4555555544322 123445688999999999999999999998765433222
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCccccc
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~ 327 (538)
..+....... ..... ........ . .....+...... .........+.........
T Consensus 238 --~~~~~~~~~~---~~~~~--~~~~~~~~---~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 292 (403)
T 3mtw_A 238 --RAGVDTIEHA---SLVDD--EGIKLAVQ---K---GAYFSMDIYNTD-YTQAEGKKNGVLEDNLRKD----------- 292 (403)
T ss_dssp --HTTCSEEEEC---TTCCH--HHHHHHHH---H---TCEEECCCSTHH-HHHHHHHHHTCCHHHHHHH-----------
T ss_pred --Hhcccccccc---ccccc--chhhhhcc---c---cceeeeeeccch-hhhhhhhccccchhhcccc-----------
Confidence 2232211000 00000 00000000 0 011111111111 1111122222110000000
Q ss_pred CCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhc
Q 009282 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVES 407 (538)
Q Consensus 328 ~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~ 407 (538)
. .............++.|+.+.+|||........ +...+..+++
T Consensus 293 --------~------~~~~~~~~~~~~~~~~g~~~~~gt~~~~~~~~~---------------------~~~~~~~~~~- 336 (403)
T 3mtw_A 293 --------R------DIGELQRENFRKALKAGVKMVYGTDAGIYPHGD---------------------NAKQFAVMVR- 336 (403)
T ss_dssp --------H------HHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTC---------------------GGGHHHHHHH-
T ss_pred --------c------cccccccchhhHHHhcCCeEeeccCCcccccch---------------------HHHHHHHHHH-
Confidence 0 000011234567888999999999965432210 0111212334
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEE
Q 009282 408 GQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRV 487 (538)
Q Consensus 408 ~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~ 487 (538)
.|+|++|||+++|.|||++||+++++|+|++||.|||||||.||+.++.. ..+|.+||++||+
T Consensus 337 ~gls~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~dPl~di~~-----------------~~~v~~Vi~~G~v 399 (403)
T 3mtw_A 337 YGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVTT-----------------LEKPVFVMKGGAV 399 (403)
T ss_dssp TTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGGG-----------------GGSCSEEEETTEE
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEECCChhHhHhh-----------------hcCcCEEEECCEE
Confidence 45999999999999999999998899999999999999999887644321 3468999999996
Q ss_pred E
Q 009282 488 V 488 (538)
Q Consensus 488 V 488 (538)
|
T Consensus 400 v 400 (403)
T 3mtw_A 400 V 400 (403)
T ss_dssp E
T ss_pred E
Confidence 5
No 63
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.97 E-value=6.1e-33 Score=295.19 Aligned_cols=379 Identities=15% Similarity=0.127 Sum_probs=212.5
Q ss_pred CcccEEEECcEEEcCCCceeeeEEEeCCEEEEecCC----------CCCCCCceEEecCCCeeeccccccccccccccCC
Q 009282 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN----------INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (538)
Q Consensus 51 ~~~~~~i~n~~vv~~~~~~~~~V~I~~grI~~Vg~~----------~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~ 120 (538)
.+.|++|+|++|+|+++..++||+|+||||++||+. ...++++++||++|++|+|||||+|+|+..+ +
T Consensus 63 ~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~--~ 140 (566)
T 4ep8_C 63 DCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICP--Q 140 (566)
T ss_dssp GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCT--T
T ss_pred CCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCC--C
Confidence 367999999999999988899999999999999963 2235689999999999999999999999876 2
Q ss_pred CCChhhHHHHHHHHHhCCcEEEecccCCC--------CCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 121 SETIDDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
. .......+.++........ ...................++++++......... ....+.
T Consensus 141 ~---------~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~ 208 (566)
T 4ep8_C 141 Q---------AEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQPD---ALREQV 208 (566)
T ss_dssp H---------HHHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCHH---HHHHHH
T ss_pred c---------cchhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeecccccccch---hhHHHh
Confidence 1 1123344555554322111 1123444445555555667777776655544332 233333
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHH
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i 272 (538)
..+...++.+..+ ......+......+...+.....|.................+......+....+.......+
T Consensus 209 -~a~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (566)
T 4ep8_C 209 -AAGVIGLKIHEDW----GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDI 283 (566)
T ss_dssp -HHTCSEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTG
T ss_pred -hhccccccccccc----cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccCccccccccccchhHHHHHH
Confidence 5577777766543 33566777778888888999999986543322222222222222111111111111111111
Q ss_pred HHHHHHHHHcCCCEEEEeccCHHHH-HHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHH
Q 009282 273 TRAIRLAEFVNTPLYVVHVMSMDAM-EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (538)
Q Consensus 273 ~~~l~~~~~~~~~~~~~h~~~~~~~-~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~ 351 (538)
.+....+.....+.+..|....... +.+... ...|++......... ..+ +.. .......
T Consensus 284 ~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~----------~~~h~l~~~~~~~~~-------~~~--~~~-~~~~~~~ 343 (566)
T 4ep8_C 284 ITACAHPNILPSSTNPTLPYTLNTIDEHLDML----------MVCHHLDPDIAEDVA-------FAE--SRI-RRETIAA 343 (566)
T ss_dssp GGGGGCTTEEEEECSTTSSCBTTHHHHHHHHH----------HHHHTCCTTCHHHHH-------HHH--HHC-CHHHHHH
T ss_pred HHHHHHHhhcCCceeehhHHHHHHhhcccceE----------EEeecccCChhhHHh-------hcc--CCC-cccchHH
Confidence 1111111110000011111111111 111111 111333222211100 000 000 0112233
Q ss_pred HHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCC
Q 009282 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYP 431 (538)
Q Consensus 352 l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~ 431 (538)
...+++.|....+++|+.+.....+.. ...+.+.......+..+....+..++++++++|+++|+|||++||+++
T Consensus 344 ~~~l~~~G~~~~i~sD~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAralGL~d 418 (566)
T 4ep8_C 344 EDVLHDLGAFSLTSSDSQAMGRVGEVI-----LRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAH 418 (566)
T ss_dssp HHHHHHHTSSCEECCCTTSSSCTTCHH-----HHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHHTTCTT
T ss_pred HHHHHhCCCcceEeecccccccccccc-----cccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 456778899999999998776543211 001100000000000011112245679999999999999999999999
Q ss_pred CCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEEC-Ceee
Q 009282 432 RKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN-DELN 495 (538)
Q Consensus 432 ~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~-~~~~ 495 (538)
++|||++||+|||||||++.+ ..++.+|+++|++||-. |...
T Consensus 419 ~iGSIevGK~ADLVL~Dp~~f----------------------~vkP~~v~~~G~iv~a~~gd~n 461 (566)
T 4ep8_C 419 EVGSIEVGKLADLVVWSPAFF----------------------GVKPATVIKGGMIAIAPMGDIN 461 (566)
T ss_dssp TSSSSCTTSBCCEEEECGGGT----------------------TTSCSEEEETTEEEEEEECCTT
T ss_pred CCcCCCCCCCCCEEEECcccc----------------------CCCeeEEeeCCEEEEcccCCcc
Confidence 999999999999999998754 23688999999999953 4433
No 64
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.97 E-value=1.5e-29 Score=256.72 Aligned_cols=354 Identities=16% Similarity=0.184 Sum_probs=189.6
Q ss_pred cccEEEECcEEEcCCC---ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCC---CChh
Q 009282 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---ETID 125 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~---~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~---~~~~ 125 (538)
|.+++|+|++|+|+++ .++++|+|+||||++||+....++++++||++|++|+|||||+|+|+....... ....
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~ 82 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLP 82 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHTTSC
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCCCCCEEEECCCCEEEeChhhhhhCcccccCCcccccccc
Confidence 5679999999999875 367899999999999999877777889999999999999999999987651110 0111
Q ss_pred hHH------HHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee------------------------
Q 009282 126 DFF------SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM------------------------ 175 (538)
Q Consensus 126 ~~~------~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 175 (538)
... .........++|+........ . ........+...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (426)
T 3mkv_A 83 NVLVTLRAVPIMRAMLRRGFTTVRDAGGAG----Y-PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSP 157 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECSSCC----H-HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSSS
T ss_pred hhHHHHHHHhhhhhhhcccccccccccccc----h-hhhhHhhccceeeceeccccccccccccccchhhhhhccccccc
Confidence 111 112334567777776543211 1 11111111111000000000
Q ss_pred -----------eeecCChhhHHHHHHHHHHcCCcEEEEEeee--------CCCccCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 176 -----------AITKWDEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 176 -----------~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
.......+......... ..+.......... ..............+..+...+.....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
T 3mkv_A 158 CGCCVRVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp CSSBCCTTCSEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSCSSCCTTSBCSCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred cchhhhhccccccccCHHHHHHHHHHHh-hcccccccccccccccccccccccchhhHHHHHHHHHHHHhcccceeehhh
Confidence 00000011222333333 3444444333221 122344566777777788888888887776
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccc
Q 009282 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (538)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~ 316 (538)
......... ..+.. ........ .. .......+.+......+..
T Consensus 237 ~~~~~~~~~----~~~~~-------------------------------~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 279 (426)
T 3mkv_A 237 TPAAIARAV----RCGVR-------------------------------TIEHGNLI-DD-ETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp SHHHHHHHH----HTTCC-------------------------------EEEECTTC-CH-HHHHHHHHHTCEEECCHHH
T ss_pred hhhhHHHHH----hhccc-------------------------------cccccccc-cc-hhhhhhhhcCccccccccc
Confidence 553322211 12221 11111111 00 1122222222222111111
Q ss_pred cccccCcccccCCCcccccceeecCC--CCCcccHHHHHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchh
Q 009282 317 SGLVLDDSWLWHSDFVTAAKYVMSPP--IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIE 394 (538)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~p~--~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~ 394 (538)
........... . ......+. ............+...|+.+.+++|..+.....
T Consensus 280 ~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~~~------------------- 334 (426)
T 3mkv_A 280 YDALASEGEKY--G----LPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRL------------------- 334 (426)
T ss_dssp HHHHHHHTTTT--T----CCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGGGG-------------------
T ss_pred hhhhhhhhhhc--c----ccccccccccccccccchhhHHhhhcCceeeeccCCcccccch-------------------
Confidence 00000000000 0 00000000 000012244567888899999999976442221
Q ss_pred hhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEE
Q 009282 395 ERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV 474 (538)
Q Consensus 395 ~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (538)
....+ .++.. ++|++|||+++|.|||++||+++++|+|++||.|||||||.||+.++.. +...
T Consensus 335 --~~~~~-~~~~~-gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~ADlvvlD~dPl~di~~-----------~~~~-- 397 (426)
T 3mkv_A 335 --QSDEF-RILAE-VLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDC-----------LLGQ-- 397 (426)
T ss_dssp --TTHHH-HHHHT-TSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCSTT-----------TCSS--
T ss_pred --HHHHH-HHHHh-CCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcceEEEECCChHHhHHH-----------HhCC--
Confidence 01111 22233 5999999999999999999998889999999999999999997754431 1111
Q ss_pred eeEEEEEEECCEEEEE
Q 009282 475 KGKVEVTIAGGRVVWE 490 (538)
Q Consensus 475 ~~~v~~V~v~G~~V~~ 490 (538)
..+|+.||++||+|.+
T Consensus 398 ~~~v~~Vi~~G~vv~~ 413 (426)
T 3mkv_A 398 GEHIPLVMKDGRLFVN 413 (426)
T ss_dssp STTCCEEEETTEEEEE
T ss_pred CCCccEEEECCEEEEC
Confidence 2468999999997654
No 65
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.95 E-value=1.2e-26 Score=233.91 Aligned_cols=318 Identities=17% Similarity=0.138 Sum_probs=173.4
Q ss_pred ceeeeEEEeCCEEEEecCCCCCCCCceEEecCCCeeeccccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccC
Q 009282 68 QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVI 147 (538)
Q Consensus 68 ~~~~~V~I~~grI~~Vg~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~ 147 (538)
..+++|+|+||||++|++ . + || +|++|+|||||+|+|+..+.. ... .++....++++++||||++|+..
T Consensus 27 ~~~~~V~I~~g~I~~vg~------~-~-iD-~g~~v~PGlID~H~H~~~~~~-~~~-~~l~~~~~~~l~~GvTtv~d~~~ 95 (376)
T 1o12_A 27 EFTGDVEIEEGKIVKVEK------R-E-CI-PRGVLMPGFVDPHIHGVVGAD-TMN-CDFSEMEEFLYSQGVTTFLATTV 95 (376)
T ss_dssp EEEEEEEEETTEEEEEEE------C-C-SC-CSSEEEECEEEEEECEETTEE-TTT-TCHHHHHHHHHTTTEEEEEEECC
T ss_pred ccCceEEEECCEEEEeCC------C-c-cC-CCCEEccCeEEEeecCCCCCC-CCh-hhHHHHHHHHHhCCcEEEEeccC
Confidence 368999999999999986 1 4 99 999999999999999976521 111 13666788899999999999864
Q ss_pred CCCC-CHHHHHHHHHHHhcc--cceeeeeeeeeecC--------ChhhHHHH-HHHHHHcCCcEEEEEeeeCCCccCCHH
Q 009282 148 PING-SLTAGFEAYEKKAKN--SCMDYGFHMAITKW--------DEVVSDEM-EVMVKEKGINSFKFFMAYKGSFMINDE 215 (538)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~g~~~ik~~~~~~~~~~~~~~ 215 (538)
..+. ...+.++...+.... +....+.+...+.. +.+.+.+. .+..++. ...++...-.+. ....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pe---~~~~ 171 (376)
T 1o12_A 96 STSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRPPSERELSEI-DSPAKMLTFAPE---IESS 171 (376)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEECSSSCGGGCTTSCTTTCCCCCHHHHTTC-CTTEEEEEECTT---STTG
T ss_pred CCCHHHHHHHHHHHHHHhhccCCCceEEEEEEcCcCCcccCCCCCHHHhcCCCHHHHHHh-hCCeEEEEEccC---CccH
Confidence 3221 222223333222211 11112222211111 11111111 1222121 122332211111 0111
Q ss_pred HHHHHHHHHHhcCCeEEE-EcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH
Q 009282 216 LLIEGFKRCKSLGALAMV-HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (538)
Q Consensus 216 ~l~~~~~~A~~~g~~v~~-H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~ 294 (538)
++++.|+++|+++++ |+.... +.++.+.+.|... +.|+.+.
T Consensus 172 ---~~i~~A~~~g~~v~igH~~~~~---~~i~~a~~~G~~~--------------------------------itH~~~~ 213 (376)
T 1o12_A 172 ---ELLLRLVKRDIVLSAGHSIATF---EEFMKFYKEGVKR--------------------------------ITHFPNG 213 (376)
T ss_dssp ---GGGGGGGGGTCEEEECSBCCCH---HHHHHHHTTTCCE--------------------------------ESSTTTT
T ss_pred ---HHHHHHHHCCCEEEeecCccCH---HHHHHHHHCCCCe--------------------------------EEecccC
Confidence 467778888888887 874321 1222223334321 2222100
Q ss_pred H------HHHHHHH-HHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-CC-ceEEe
Q 009282 295 D------AMEEIAK-ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-GI-LQLVG 365 (538)
Q Consensus 295 ~------~~~~i~~-~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-Gv-~~~lg 365 (538)
. ....+.. +...+ ++.+...+. +.++| ..+..+++. |. .+++.
T Consensus 214 ~~~~~~~~~g~~~~~l~~~~--~~~~~~~~~------------------~~~~p--------~~~~~~~~~~g~~~~~~~ 265 (376)
T 1o12_A 214 LKPLHHREIGITGAGLLLDD--VKLELICDG------------------VHLSR--------EMVKLVYKVKKANGIVLV 265 (376)
T ss_dssp BCCCCSSCCHHHHHHHHCTT--CEEEEECSS------------------SSSCH--------HHHHHHHHHHTGGGEEEE
T ss_pred cCChhhcccchhhhhhcCCc--ceEEEeCCC------------------cCcCH--------HHHHHHHhhCCCCCEEEe
Confidence 0 0011110 11111 111111111 11222 224445555 55 78999
Q ss_pred CCCCCCC---hhhhhc-------CccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcc
Q 009282 366 TDHCAFN---STQKAF-------GIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGA 435 (538)
Q Consensus 366 tD~~~~~---~~~~~~-------~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~Gs 435 (538)
||..... +..... ..+.+...+.+.++....+...++.++...+++++++++++|.|||++||++++ |+
T Consensus 266 sd~~~~~g~~~g~~~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~~~-G~ 344 (376)
T 1o12_A 266 TDSISAAGLKDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDDR-GR 344 (376)
T ss_dssp CCBCTTTTSCSCEEESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTTS-SC
T ss_pred cCchhhcCCCCeeEEECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCC-cc
Confidence 9864221 000000 001122234455565666777776677666799999999999999999999655 99
Q ss_pred cccCCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECC
Q 009282 436 ILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 492 (538)
Q Consensus 436 I~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~ 492 (538)
|++||.||||++|.+ .+|..||++|++||+++
T Consensus 345 i~~G~~ADlv~~d~~-------------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 345 IAEGTRADLVLLDED-------------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp CSTTSBCCEEEECTT-------------------------CCEEEEEETTEEEEEC-
T ss_pred CCCCCcCCEEEECCC-------------------------CCEEEEEECCEEEeecC
Confidence 999999999999965 36999999999999875
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.56 E-value=6.1e-15 Score=112.77 Aligned_cols=66 Identities=20% Similarity=0.387 Sum_probs=56.6
Q ss_pred cccEEEECcEEEcCCC--ceeeeEEEeCCEEEEecCCCCC---CCCceEEecCCCeeeccccccccccccc
Q 009282 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAME 117 (538)
Q Consensus 52 ~~~~~i~n~~vv~~~~--~~~~~V~I~~grI~~Vg~~~~~---~~~~~vID~~G~~v~PGlID~H~H~~~~ 117 (538)
..+++|+|++|++++. ...++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+..+
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p 73 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRG 73 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCc
Confidence 3578999999999875 3688999999999999985432 3467899999999999999999999887
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.23 E-value=2.5e-10 Score=110.25 Aligned_cols=260 Identities=14% Similarity=0.094 Sum_probs=133.1
Q ss_pred cccccccccccccC--------CCCChhhHHHHHHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhcccceeeeeeee
Q 009282 106 GGIDPHTHLAMEFM--------GSETIDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGFHMA 176 (538)
Q Consensus 106 GlID~H~H~~~~~~--------~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (538)
|+||+|+|+..... .....+.....++.+.+.|||+++++..... .......+...+.+.+.+...|++..
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~ 85 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 85 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCG
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccC
Confidence 99999999975310 0112233444566778999999998864311 12322222222222122222333110
Q ss_pred e-ec-----CChhhH-HHHHHHHHHcCC-------cEEE-EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009282 177 I-TK-----WDEVVS-DEMEVMVKEKGI-------NSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (538)
Q Consensus 177 ~-~~-----~~~~~~-~~~~~~~~~~g~-------~~ik-~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~ 241 (538)
. .+ .+.+.+ +.+.+.. ..|. ..++ +.+++.+......+.+++.++.|+++|+++.+|+......
T Consensus 86 ~~hP~~~~~~~~~~l~~~~~~~l-~~gi~~~~~~~~~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~ 164 (291)
T 1bf6_A 86 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 164 (291)
T ss_dssp GGCCTHHHHSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSH
T ss_pred ccCcHhhhcCCHHHHHHHHHHHH-HhccCCcCcceeeEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCCh
Confidence 0 11 112222 2233333 2232 2332 1233221111123567889999999999999999532111
Q ss_pred HHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccccccc
Q 009282 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (538)
Q Consensus 242 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~ 321 (538)
.+.++.+.+.|+. ..++++.|+......+.+..+.+.|..+..+.... .
T Consensus 165 ~~~~~~l~~~~~~----------------------------~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~-~-- 213 (291)
T 1bf6_A 165 LEQLALLQAHGVD----------------------------LSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK-N-- 213 (291)
T ss_dssp HHHHHHHHHTTCC----------------------------GGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTC-T--
T ss_pred HHHHHHHHHcCCC----------------------------chhEEEECCCCCCCHHHHHHHHHCCCEEEEccCcc-c--
Confidence 1222222221211 13567899954222377778888898877653210 0
Q ss_pred CcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHH
Q 009282 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (538)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~ 399 (538)
. .++ .......++++++.| -++.++||.+..+.. ....| ++....+..
T Consensus 214 -------------~----~~~--~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~----------~~~~~-~~~~~~~~~ 263 (291)
T 1bf6_A 214 -------------S----YYP--DEKRIAMLHALRDRGLLNRVMLSMDITRRSHL----------KANGG-YGYDYLLTT 263 (291)
T ss_dssp -------------T----TSC--HHHHHHHHHHHHHTTCGGGEEECCCCCSGGGS----------GGGTS-CCTTHHHHT
T ss_pred -------------C----CCC--HHHHHHHHHHHHHhCCCCeEEEcCCCCCCccc----------hhcCC-CCHHHHHHH
Confidence 0 000 011234577888887 577999997532110 00112 222222333
Q ss_pred HHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 400 VWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 400 ~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.+..+ ...|+|.+++.++.|.||+++||
T Consensus 264 ~~~~l-~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 264 FIPQL-RQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp HHHHH-HHTTCCHHHHHHHHTHHHHHHCC
T ss_pred HHHHH-HHcCCCHHHHHHHHHHhHHHHhC
Confidence 44333 33469999999999999999985
No 68
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.19 E-value=5.6e-10 Score=109.51 Aligned_cols=275 Identities=13% Similarity=0.046 Sum_probs=136.9
Q ss_pred cccccccccccccCCC--CCh------hhHHH----HHHHHHhCCcEEEecccCCCC-CCHHHHHHHHHHHhc-ccceee
Q 009282 106 GGIDPHTHLAMEFMGS--ETI------DDFFS----GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDY 171 (538)
Q Consensus 106 GlID~H~H~~~~~~~~--~~~------~~~~~----~~~~~l~~GvTt~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 171 (538)
||||+|+|+....... ..+ ++... .+..+.++|||++++.+.... ...... .+..+..+ ..+...
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~-~~la~~~~~~i~~~~ 94 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLL-AEVSRAADVHIVAAT 94 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHH-HHHHHHHTCEEECEE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHH-HHHHHHhCCcEEEEe
Confidence 9999999997631111 011 22222 356688999999998864321 223333 33333332 344456
Q ss_pred eeee--ee--ecCChhhH-HHHHHHHHH--c----CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcC--Ch
Q 009282 172 GFHM--AI--TKWDEVVS-DEMEVMVKE--K----GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NG 238 (538)
Q Consensus 172 ~~~~--~~--~~~~~~~~-~~~~~~~~~--~----g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~--~~ 238 (538)
|++. +. ...+.+.+ +.+.+.... . .+..+++.++ ........+.+++.++.|+++|+++.+|+. +.
T Consensus 95 G~hp~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r 173 (330)
T 2ob3_A 95 GLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-GKATPFQELVLKAAARASLATGVPVTTHTAASQR 173 (330)
T ss_dssp ECCSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGT
T ss_pred cCCcCCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCC
Confidence 6663 11 01122222 223322211 1 2445566555 221111234478889999999999999995 22
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc-CHHHHHHHHHHHHcCCcEEEecccc
Q 009282 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVS 317 (538)
Q Consensus 239 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~-~~~~~~~i~~~~~~g~~v~~~~~~~ 317 (538)
... +.++.+.+.|.. ..++.+.||. ..+. +.+.++.+.|..+..+....
T Consensus 174 ~a~-e~l~iL~~~g~~----------------------------~~~~~i~H~f~~~~~-e~a~~~~~~G~~i~~~~~G~ 223 (330)
T 2ob3_A 174 DGE-QQAAIFESEGLS----------------------------PSRVCIGHSDDTDDL-SYLTALAARGYLIGLDHIPY 223 (330)
T ss_dssp HHH-HHHHHHHHTTCC----------------------------GGGEEECSGGGCCCH-HHHHHHHHTTCEEEECCTTC
T ss_pred CHH-HHHHHHHHcCcC----------------------------cccEEEeCCCCCCCH-HHHHHHHhCCCEEEeCCCcc
Confidence 222 333333222221 0134688997 4444 78888889998876652110
Q ss_pred ccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcC--CceEEeCCCCC-CChh----hhhcCccCcccCCCCC
Q 009282 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCA-FNST----QKAFGIDDFRKIPNGV 390 (538)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~-~~~~----~~~~~~~~~~~~~~g~ 390 (538)
..+....... ... .. ..++ .......++++++.| -.+.++||.+. ..+. .+..+ .+.|+
T Consensus 224 -~tf~~~~~~~-~~~--~~--~~~~--~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~----~n~pn-- 289 (330)
T 2ob3_A 224 -SAIGLEDNAS-ASA--LL--GIRS--WQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMD----RVNPD-- 289 (330)
T ss_dssp -CCTTCTTCHH-HHH--HH--CSSC--HHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHH----HHCTT--
T ss_pred -cccccccccc-ccc--cc--cCCC--HHHHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCccc----ccCCC--
Confidence 0000000000 000 00 0000 001124477888888 68899999652 2110 00000 00010
Q ss_pred cchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 391 NGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 391 ~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
+....+...+..+.. .|+|++++.++.|.||+++|+
T Consensus 290 -~~~~~~~~~ia~l~~-~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 290 -GMAFIPLRVIPFLRE-KGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp -GGGHHHHTHHHHHHH-TTCCHHHHHHHHTHHHHHHHS
T ss_pred -CcchHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhc
Confidence 111112222223334 469999999999999999997
No 69
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=99.07 E-value=2.4e-08 Score=94.56 Aligned_cols=245 Identities=16% Similarity=0.141 Sum_probs=132.3
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee-cCChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (538)
+||+|+|+... .. ..+.......+.++||++++.++... . ....+....+..+..+..+|++.... ...++..
T Consensus 5 ~iD~H~Hl~~~--~~--~~~~~~~l~~~~~~Gv~~~v~~~~~~-~-~~~~~~~l~~~~~~~~~~~G~hP~~~~~~~~~~~ 78 (259)
T 1zzm_A 5 FIDTHCHFDFP--PF--SGDEEASLQRAAQAGVGKIIVPATEA-E-NFARVLALAENYQPLYAALGLHPGMLEKHSDVSL 78 (259)
T ss_dssp EEESCBCTTST--TT--TTCHHHHHHHHHHTTEEEEEEECCSG-G-GHHHHHHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEeeecCCch--hh--ccCHHHHHHHHHHcCCCEEEEecCCH-H-HHHHHHHHHHhCCCeEEEEEecccccccCCHHHH
Confidence 89999999765 11 12344457778899999998764332 1 22222233333333333344433211 1233456
Q ss_pred HHHHHHHHH--cCCcEEE-EEeeeCCC---ccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 186 DEMEVMVKE--KGINSFK-FFMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 186 ~~~~~~~~~--~g~~~ik-~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
++++++... .++.+++ +.+++.-. .....+.++..++.|.++|+++.+|+.... .+.++.+.+.+.
T Consensus 79 ~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~--~~~~~il~~~~~------ 150 (259)
T 1zzm_A 79 EQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAMHLKRHDL------ 150 (259)
T ss_dssp HHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCH--HHHHHHHHHHCC------
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccH--HHHHHHHHhcCC------
Confidence 677766644 3334442 23343211 112345788899999999999999996431 122222211111
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
..+. +.|+..... +.++.+.+.|+.+..+.... +..
T Consensus 151 -----------------------~~~~-i~H~~~g~~-~~~~~~~~~g~~i~~~g~~~-------------~~~------ 186 (259)
T 1zzm_A 151 -----------------------PRTG-VVHGFSGSL-QQAERFVQLGYKIGVGGTIT-------------YPR------ 186 (259)
T ss_dssp -----------------------TTCE-EETTCCSCH-HHHHHHHHTTCEEEECGGGG-------------CTT------
T ss_pred -----------------------CCCE-EEEcCCCCH-HHHHHHHHCCCEEEECceee-------------ccc------
Confidence 1234 448865543 66777777887766543210 000
Q ss_pred cCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 340 SPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
. ..++.+++. .-++.++||++...+. ++.... +. -..+...+..+....++|.+++.+
T Consensus 187 --~-------~~~~~~~~~~~~dril~eTD~P~~~p~-------~~~g~~---~~-p~~l~~~~~~la~~~g~~~e~~~~ 246 (259)
T 1zzm_A 187 --A-------SKTRDVIAKLPLASLLLETDAPDMPLN-------GFQGQP---NR-PEQAARVFAVLCELRREPADEIAQ 246 (259)
T ss_dssp --T-------CSHHHHHHHSCGGGEEECCCBTSSCCT-------TCTTSC---CC-GGGHHHHHHHHHHHCSSCHHHHHH
T ss_pred --c-------HHHHHHHHhCCHHHEEEecCCCCccCC-------CCCCCC---Cc-HHHHHHHHHHHHHHHCcCHHHHHH
Confidence 0 013334443 2478999996533221 111111 11 123444444444445699999999
Q ss_pred HHhHhHHHHcCC
Q 009282 418 LTSTECARIFNV 429 (538)
Q Consensus 418 ~aT~~~A~~lg~ 429 (538)
..|.|++++|++
T Consensus 247 ~~~~Na~rl~~l 258 (259)
T 1zzm_A 247 ALLNNTYTLFNV 258 (259)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhCc
Confidence 999999999987
No 70
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.99 E-value=1.4e-08 Score=99.09 Aligned_cols=268 Identities=13% Similarity=0.080 Sum_probs=132.9
Q ss_pred cccccccccccccCCC--CCh------hhHHHH---HHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeee
Q 009282 106 GGIDPHTHLAMEFMGS--ETI------DDFFSG---QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF 173 (538)
Q Consensus 106 GlID~H~H~~~~~~~~--~~~------~~~~~~---~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (538)
||||+|+|+....... ..+ ++.... ...+.++|||+++++...... ......+...+.+.+.+...|+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 9999999997631110 001 222222 356778999999988644222 2333333322222233444555
Q ss_pred eeeee--cC-ChhhHHHHHHHHH---HcCCc-------EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC-hh
Q 009282 174 HMAIT--KW-DEVVSDEMEVMVK---EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN-GD 239 (538)
Q Consensus 174 ~~~~~--~~-~~~~~~~~~~~~~---~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~-~~ 239 (538)
+.... .. .+...+++.++.. ..|.. .+++.+++.+......+.+++.++.|+++|+++.+|+.. ..
T Consensus 97 hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~ 176 (314)
T 2vc7_A 97 YIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNN 176 (314)
T ss_dssp CCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTT
T ss_pred CCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCccc
Confidence 54221 11 1122344444332 12221 244445554322222456778889999999999999952 11
Q ss_pred hHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecccccc
Q 009282 240 AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGL 319 (538)
Q Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~ 319 (538)
...+.++.+.+.|+. ..++.+.|+......+.+..+.+.|..+..+.... .
T Consensus 177 ~~~~~~~~l~~~~~~----------------------------~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~-~ 227 (314)
T 2vc7_A 177 TGLEQQRILTEEGVD----------------------------PGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGL-D 227 (314)
T ss_dssp HHHHHHHHHHHTTCC----------------------------GGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTC-T
T ss_pred ChHHHHHHHHHcCCC----------------------------cccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCc-c
Confidence 112333332222221 12557889865222377778888898776653210 0
Q ss_pred ccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCc--chhh
Q 009282 320 VLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVN--GIEE 395 (538)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~--g~~~ 395 (538)
.+. ........+..+++. +-++.++||....++... . +++. .+.|.. +...
T Consensus 228 ----------~~~-----------~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~-~--~p~~-~~~g~~~~~~~~ 282 (314)
T 2vc7_A 228 ----------LFL-----------PVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGT-A--KPEY-KPKLAPRWSITL 282 (314)
T ss_dssp ----------TTS-----------CHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGG-G--CTTS-HHHHCTTCSTTH
T ss_pred ----------cCC-----------CHHHHHHHHHHHHHcCCCCeEEEcCCccccccccc-c--chhh-hhcCCCCcCHHH
Confidence 000 000112335566665 457799999742210000 0 0110 000111 1111
Q ss_pred hHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 396 RMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 396 ~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.+...+..+ ...|++.+++.++.|.||+++|+
T Consensus 283 ~~~~~~~~l-~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 283 IFEDTIPFL-KRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp HHHTHHHHH-HHTTCCHHHHHHHHTHHHHHHTC
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHCHHHHhC
Confidence 122333233 33469999999999999999885
No 71
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.96 E-value=6.2e-08 Score=92.36 Aligned_cols=252 Identities=12% Similarity=0.072 Sum_probs=140.7
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc----cceeeeeeeeee-cCC
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN----SCMDYGFHMAIT-KWD 181 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~ 181 (538)
|||+|+|+... . ..++.......+..+||..++..+... ..........+..+. .+..+|++.... ...
T Consensus 3 ~iD~H~HL~~~--~--~~~d~~~vl~~a~~~gV~~~v~~g~~~--~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~ 76 (287)
T 3rcm_A 3 LIDIGVNLTNS--S--FHDQQAAIVERALEAGVTQMLLTGTSL--AVSEQALELCQQLDASGAHLFATAGVHPHDAKAWD 76 (287)
T ss_dssp EEEEEECTTCG--G--GTTCHHHHHHHHHHTTEEEEEECCCSH--HHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCC
T ss_pred eEEEeecCCch--h--cccCHHHHHHHHHHcCCeEEEEecCCH--HHHHHHHHHHHhCCCCCceEEEEEEECcCccccCC
Confidence 89999999765 1 123455567888999999988653321 122222233333333 444555554322 233
Q ss_pred hhhHHHHHHHHHHcCCcEEE-EEeeeCCCc---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 182 EVVSDEMEVMVKEKGINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
++.++.++++.....+.+++ +.+++.... ....+.+++.++.|.++++++.+|+.... .+.++.+.+.+.
T Consensus 77 ~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~--~~~l~il~~~~~---- 150 (287)
T 3rcm_A 77 TDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDAS--ERLLAILKDYRD---- 150 (287)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHHHTTGG----
T ss_pred HHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcH--HHHHHHHHHcCC----
Confidence 45677777776444555555 335553211 12366788999999999999999996542 223322222111
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccce
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
...+. +.|+.+.+. +.++.+.+.|+.+..+... .+. ..
T Consensus 151 ------------------------~~~~~-V~H~fsG~~-e~a~~~l~~G~yis~~g~i---~~~---------k~---- 188 (287)
T 3rcm_A 151 ------------------------HLTGA-VVHCFTGER-EALFAYLDLDLHIGITGWI---CDE---------RR---- 188 (287)
T ss_dssp ------------------------GCSCE-EECSCCCCH-HHHHHHHHTTCEEEECGGG---GCT---------TT----
T ss_pred ------------------------CCCeE-EEEeCCCCH-HHHHHHHHCCcEEEECchh---ccc---------cC----
Confidence 01133 558866554 7777788889877654221 000 00
Q ss_pred eecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHH
Q 009282 338 VMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~ea 415 (538)
. ..++++++. --++.+.||.+-..+. ++.....|-...-..+...++.+....|++.+++
T Consensus 189 -------~----~~l~~~v~~ip~drlLlETD~P~l~p~-------~~~~~~rg~~n~P~~l~~v~~~lA~~~g~s~eev 250 (287)
T 3rcm_A 189 -------G----THLHPLVGNIPEGRLMLESDAPYLLPR-------SLRPKPKSGRNEPAFLPEVLREVALHRGESAEHT 250 (287)
T ss_dssp -------C----GGGHHHHTTSCTTSEEECCCTTSCCCT-------TCSSCCTTCCCCGGGHHHHHHHHHHHHTSCHHHH
T ss_pred -------H----HHHHHHHHhcCCccEEEeccCCccCcc-------ccccccCCCcCCHHHHHHHHHHHHHHhCcCHHHH
Confidence 0 113344443 2468999996543321 1100011211112234444544444456999999
Q ss_pred HHHHhHhHHHHcCCC
Q 009282 416 VRLTSTECARIFNVY 430 (538)
Q Consensus 416 l~~aT~~~A~~lg~~ 430 (538)
.++.|.|+.+++|+.
T Consensus 251 ~~~~~~N~~rlf~l~ 265 (287)
T 3rcm_A 251 AAHTTATARDFFQLP 265 (287)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCC
Confidence 999999999999984
No 72
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.91 E-value=9.7e-08 Score=93.78 Aligned_cols=279 Identities=15% Similarity=0.086 Sum_probs=153.8
Q ss_pred cccccccccccccC---------CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHH----hcccceeee
Q 009282 106 GGIDPHTHLAMEFM---------GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK----AKNSCMDYG 172 (538)
Q Consensus 106 GlID~H~H~~~~~~---------~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 172 (538)
|+..+|=|+...+. .....+.....++.+.+.|++|++|+...........+....+. +-..++..|
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG 100 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTG 100 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCC
Confidence 77888888865421 01123344445566778999999998644433333444444443 344555556
Q ss_pred eeeeee-----c----CC-hhhHHHHHHHHHHcC-----------------CcEEEEEeeeCCCccCCHHHHHHHHHHHH
Q 009282 173 FHMAIT-----K----WD-EVVSDEMEVMVKEKG-----------------INSFKFFMAYKGSFMINDELLIEGFKRCK 225 (538)
Q Consensus 173 ~~~~~~-----~----~~-~~~~~~~~~~~~~~g-----------------~~~ik~~~~~~~~~~~~~~~l~~~~~~A~ 225 (538)
++.... . .+ ++..+.+..-+ ..| +..+|+..++........+.+++.++.|+
T Consensus 101 ~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~ 179 (363)
T 3ovg_A 101 FHKAKFYDKYSSWLAVVPTEEIVKMCVAEI-EEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSI 179 (363)
T ss_dssp CCCGGGSCTTTSHHHHSCHHHHHHHHHHHH-HTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHH
T ss_pred CCcCcccccCcHhhhcCCHHHHHHHHHHHH-HhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 554321 1 11 12222222212 222 34567777765333334677888899999
Q ss_pred hcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHH-
Q 009282 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR- 304 (538)
Q Consensus 226 ~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~- 304 (538)
+.|+++.+|........+.++.+.+.++. ..++.+.|+....+.+....+.
T Consensus 180 e~glPViiH~r~gr~a~d~l~iL~e~g~~----------------------------~~~vvi~H~~~~~~~~~a~~~l~ 231 (363)
T 3ovg_A 180 LTGCPILVHTQLGTMALEVAKHLIGFGAN----------------------------PDKIQISHLNKNPDKYYYEKVIK 231 (363)
T ss_dssp HHCCCEEEEEETTCSHHHHHHHHHHHTCC----------------------------GGGEEEECGGGSCCHHHHHHHHH
T ss_pred HhCCEEEEeCCCCCCHHHHHHHHHhcCCC----------------------------CCcEEEEcCCCCCCHHHHHHHHH
Confidence 99999999995321111333333333321 1246788987422235555666
Q ss_pred HcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC--ceEEeCCCCCC---ChhhhhcC
Q 009282 305 KAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAF---NSTQKAFG 379 (538)
Q Consensus 305 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv--~~~lgtD~~~~---~~~~~~~~ 379 (538)
+.|..+..+-... +++.|. ......++.+.+.|. ++.+.||.+.. ++..+..+
T Consensus 232 ~~G~yI~f~g~~~-------------------~~~~~~---~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g 289 (363)
T 3ovg_A 232 ETGVTLCFDGPDR-------------------VKYYPD---SLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKG 289 (363)
T ss_dssp HHCCEEEECCTTC-------------------TTTCCH---HHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTT
T ss_pred HCCcEEEECCeec-------------------cccCCh---hHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCC
Confidence 7887776543210 000000 011245677787765 78999997622 11111000
Q ss_pred ccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcccccCCCccEE
Q 009282 380 IDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 445 (538)
Q Consensus 380 ~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~GsI~~Gk~ADlv 445 (538)
...+ +.. .+...+..+....|+|.+++.++.|.||+++|++ +..+++.+||.-+-|
T Consensus 290 -----~~~n---~p~-~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l-~~~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 290 -----KQTF---GLA-YLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAF-DEKRNFDPLKVSKEV 345 (363)
T ss_dssp -----EECC---CTH-HHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSC-CCCCCCCGGGSCHHH
T ss_pred -----CCCC---Ccc-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCC-CCcCccCcccCCHHH
Confidence 0001 111 1222233344455699999999999999999999 667999999976543
No 73
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.86 E-value=9e-07 Score=84.23 Aligned_cols=241 Identities=13% Similarity=0.078 Sum_probs=132.3
Q ss_pred cccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc-ccceeeeeeeee-ec----
Q 009282 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAI-TK---- 179 (538)
Q Consensus 106 GlID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---- 179 (538)
++||+|+|+..... ..+.......+.++||++++.++... . ....+....+..+ +.+..+|++... ..
T Consensus 5 ~~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~-~-~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAPDF----DRDLDDVLEKAKKANVVALVAVAEHS-G-EFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSGGG----TTTHHHHHHHHHHTTEEEEEECCSSG-G-GHHHHHHHHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCchhh----hcCHHHHHHHHHHCCCCEEEEeCCCH-H-HHHHHHHHHHHCCCCEEEEEEECCCcccccccc
Confidence 59999999976411 12444557778899999999875432 1 2222223333333 233445555422 11
Q ss_pred --CChhhHHHHHHHHHH--cCCcEEE-EEeeeCCCc-------cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHH
Q 009282 180 --WDEVVSDEMEVMVKE--KGINSFK-FFMAYKGSF-------MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (538)
Q Consensus 180 --~~~~~~~~~~~~~~~--~g~~~ik-~~~~~~~~~-------~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~ 247 (538)
...+.++++.++..+ ..+.+++ +.+++.... ....+.++..++.|.++|+++.+|+.... .+.++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~--~~~~~i 156 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAG--RPTINL 156 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCH--HHHHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcH--HHHHHH
Confidence 223445666665533 3444554 233431111 11245788899999999999999996431 122222
Q ss_pred HHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcC-CCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccc
Q 009282 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (538)
Q Consensus 248 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~ 326 (538)
....+ .++++ |+..... +.++.+.+.|+.+..+...
T Consensus 157 -------------------------------l~~~~~~~~v~-H~~~g~~-~~~~~~~~~g~~i~~~g~~---------- 193 (272)
T 2y1h_A 157 -------------------------------LQEQGAEKVLL-HAFDGRP-SVAMEGVRAGYFFSIPPSI---------- 193 (272)
T ss_dssp -------------------------------HHHTTCCSEEE-ETCCSCH-HHHHHHHHTTCEEEECGGG----------
T ss_pred -------------------------------HHhCCCCCEEE-EccCCCH-HHHHHHHHCCCEEEECCcc----------
Confidence 22222 34555 8866543 6777788888776654321
Q ss_pred cCCCcccccceeecCCCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHh
Q 009282 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM 404 (538)
Q Consensus 327 ~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 404 (538)
.+ + ..++.+.+.. -++.++||.+...+. .|....-..+...+..+
T Consensus 194 ---------~~---~--------~~~~~~~~~~~~drll~eTD~P~~~p~-------------~g~~~~p~~l~~~~~~l 240 (272)
T 2y1h_A 194 ---------IR---S--------GQKQKLVKQLPLTSICLETDSPALGPE-------------KQVRNEPWNISISAEYI 240 (272)
T ss_dssp ---------GT---C--------HHHHHHHHHSCGGGEEECCCTTSSCSS-------------TTSCCCGGGHHHHHHHH
T ss_pred ---------cC---c--------HHHHHHHHhCCHHHEEEecCCCCCCCC-------------CCCcCcHHHHHHHHHHH
Confidence 00 0 1244444442 367999997533211 00000011223333333
Q ss_pred hhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 405 VESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 405 ~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
....|++.+++.+..|.|++++|+++
T Consensus 241 a~~~g~~~e~~~~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 241 AQVKGISVEEVIEVTTQNALKLFPKL 266 (272)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHSTTH
T ss_pred HHHHCcCHHHHHHHHHHHHHHHHHhH
Confidence 33336999999999999999999984
No 74
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.83 E-value=1.9e-07 Score=88.56 Aligned_cols=250 Identities=10% Similarity=0.027 Sum_probs=129.7
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee-cCChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (538)
+||+|+|+..... ..+.......+.++||++++.++.. ......+....+..+..+..+|++.... ...++..
T Consensus 5 ~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~--~~~~~~~~~l~~~~~~i~~~~G~hP~~~~~~~~~~~ 78 (264)
T 1xwy_A 5 MFDIGVNLTSSQF----AKDRDDVVACAFDAGVNGLLITGTN--LRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATE 78 (264)
T ss_dssp CEEEEECTTSGGG----TTTHHHHHHHHHHTTCCEEEECCCS--HHHHHHHHHHHHHSTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEEeeCCCChhh----ccCHHHHHHHHHHCCCCEEEEeCCC--HHHHHHHHHHHHhCCCEEEEEEECCcccccCCHHHH
Confidence 8999999976511 1234455677889999998876432 1112222222222222222333332211 2233455
Q ss_pred HHHHHHHHHcCCcEEEE-EeeeCCCc---cCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSFKF-FMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~~~---~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+++.++....+..+++. .+++.... ....+.++..++.|.++|+++.+|+... ..+.++.+.+.+
T Consensus 79 ~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a--~~~~~~il~~~~--------- 147 (264)
T 1xwy_A 79 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDA--HERFMTLLEPWL--------- 147 (264)
T ss_dssp HHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHGGGG---------
T ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCc--hHHHHHHHHhcC---------
Confidence 66666663334444442 23432111 1113458889999999999999999543 112222221111
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
....++++ |+..... +.++.+.+.|+.+..+.... .+.
T Consensus 148 -------------------~~~~~~v~-H~~~g~~-~~~~~~~~~g~yi~~~g~~~------------~~~--------- 185 (264)
T 1xwy_A 148 -------------------DKLPGAVL-HCFTGTR-EEMQACVAHGIYIGITGWVC------------DER--------- 185 (264)
T ss_dssp -------------------GGSSCEEE-CSCCCCH-HHHHHHHHTTCEEEECGGGG------------CTT---------
T ss_pred -------------------CCCCcEEE-EccCCCH-HHHHHHHHCCeEEEECcccc------------CCc---------
Confidence 01234544 9865443 66777777887665442210 000
Q ss_pred CCCCcccHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCccC-cccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHH
Q 009282 342 PIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDD-FRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~G--v~~~lgtD~~~~~~~~~~~~~~~-~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~ 418 (538)
....++.+++.. -++.++||++...+... .+ +. |-...-..+...+..+....++|.+++.+.
T Consensus 186 ------~~~~l~~~~~~~~~drll~eTD~P~~~~~~~----~~~~~----g~~n~p~~~~~~~~~~a~~~g~~~e~~~~~ 251 (264)
T 1xwy_A 186 ------RGLELRELLPLIPAEKLLIETDAPYLLPRDL----TPKPS----SRRNEPAHLPHILQRIAHWRGEDAAWLAAT 251 (264)
T ss_dssp ------TSHHHHHHGGGSCGGGEEECCCTTSCCCTTC----TTCCC----SSCCCGGGHHHHHHHHHHHHTCCHHHHHHH
T ss_pred ------CcHHHHHHHHhCCHHHEEEecCCCCcCcccc----ccccC----CCCCchHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 002355555542 37899999753322100 00 10 100001123333433333346999999999
Q ss_pred HhHhHHHHcCC
Q 009282 419 TSTECARIFNV 429 (538)
Q Consensus 419 aT~~~A~~lg~ 429 (538)
.+.|+++++|+
T Consensus 252 ~~~Na~rl~~l 262 (264)
T 1xwy_A 252 TDANVKTLFGI 262 (264)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCc
Confidence 99999999997
No 75
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.77 E-value=1.2e-06 Score=85.58 Aligned_cols=155 Identities=15% Similarity=0.102 Sum_probs=99.4
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
++.++.+..+ ....+.+.+..+++.|+++|+++.+|+.+...... +..+
T Consensus 164 ~vvG~dL~g~---E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~----------------------------i~~a 212 (343)
T 3rys_A 164 PIAGIGLDSA---EVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASY----------------------------ITEA 212 (343)
T ss_dssp CCCEEEEESC---CTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHH----------------------------HHHH
T ss_pred CEEEEecCCc---ccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHH----------------------------HHHH
Confidence 4555554322 22346788999999999999999999954322111 1111
Q ss_pred HHHHHHcCCCEEEEeccCHHH-HHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc--ceeecCCCCCcccHHHH
Q 009282 276 IRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA--KYVMSPPIRASGHNKAL 352 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~~~-~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~~~~~l 352 (538)
+. .++.. .+.|+..... .+.++.++++|+.+..||.+. +.++. .+.. .++
T Consensus 213 l~---~lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN-------------~~l~~~~~~~~----------hPi 265 (343)
T 3rys_A 213 LD---VLHVE-RIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSN-------------VRLRAVDKLAD----------HPL 265 (343)
T ss_dssp HH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCCEEECHHHH-------------HHTTSSSCGGG----------CSH
T ss_pred Hh---cCCcc-eeeeeeeecCChHHHHHHHhcCCCeeEchhHH-------------HHhCCCCCccc----------chH
Confidence 11 12332 4778876542 378999999999999999873 22211 1111 128
Q ss_pred HHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 353 QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 353 ~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
+.++++|++++++||.+..... .+...+..+....++++++ ++.+|.|++++..++
T Consensus 266 ~~ll~~Gv~V~l~TDdp~~~~~---------------------~l~~E~~~a~~~~~l~~~~-l~~l~~nsi~~sf~~ 321 (343)
T 3rys_A 266 PEMLAIGLNVCVNSDDPAYFGG---------------------YVDDNFEQLVKVLEFSVPE-QATLAANSIRSSFAS 321 (343)
T ss_dssp HHHHHTTCCEEECCBSTTTTTC---------------------CHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHSSSC
T ss_pred HHHHHCCCeEEEeCCCccccCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHCCC
Confidence 9999999999999997644211 2233332333434699999 577799999988874
No 76
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=98.70 E-value=3e-07 Score=91.34 Aligned_cols=143 Identities=11% Similarity=0.058 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 214 ~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
.+.++.+++.|+++|+++.+|+.+... | .+ ...+..++ ..++.. .+.|+..
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~-----------~----------~~----~~~i~~al---~~lg~~-ri~Hgv~ 264 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT-----------L----------PN----LNTLYSAI---QVLKVE-RIGHGIR 264 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT-----------S----------SS----SHHHHHHH---HTSCCS-EEEECGG
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC-----------C----------Cc----hHHHHHHH---hccCCC-EEecchh
Confidence 788999999999999999999954310 0 00 01111111 123444 5888876
Q ss_pred HHH-HHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc--ceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC
Q 009282 294 MDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA--KYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (538)
Q Consensus 294 ~~~-~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~ 370 (538)
... .+.++.+++.|+.+..||.+. +..+. .+. .. ++..++++|+++++|||.+.
T Consensus 265 l~~~~~l~~~l~~~~i~v~~cP~SN-------------~~l~~~~~~~-~~---------pi~~ll~~Gv~V~lgTD~~~ 321 (371)
T 2pgf_A 265 VAESQELIDMVKEKNILLEVCPISN-------------VLLKNAKSMD-TH---------PIRQLYDAGVKVSVNSDDPG 321 (371)
T ss_dssp GGGCHHHHHHHHHTTCEEEECHHHH-------------HHTTSSSCGG-GC---------THHHHHHTTCEEEECCBCHH
T ss_pred ccccHHHHHHHHHcCCeEEECcchh-------------HHhCCCCccc-cC---------hHHHHHHCCCeEEEeCCCCc
Confidence 643 145899999999999999863 22211 111 11 28899999999999999643
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.+. ..+...+..+....+++++++ +++|.|++++.+++
T Consensus 322 ~~~---------------------~~l~~e~~~a~~~~~l~~~~l-~~lt~ns~~asf~~ 359 (371)
T 2pgf_A 322 MFL---------------------TNINDDYEELYTHLNFTLEDF-MKMNEWALEKSFMD 359 (371)
T ss_dssp HHT---------------------CCHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHCCSC
T ss_pred ccC---------------------CCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHcCC
Confidence 211 012222223333346999996 88899999999884
No 77
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.69 E-value=3e-07 Score=89.35 Aligned_cols=262 Identities=15% Similarity=0.104 Sum_probs=138.7
Q ss_pred cccccccccccccC-------C---CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHH-HHhcccceeeeee
Q 009282 106 GGIDPHTHLAMEFM-------G---SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYE-KKAKNSCMDYGFH 174 (538)
Q Consensus 106 GlID~H~H~~~~~~-------~---~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 174 (538)
|+..+|=|+..... . ....+.....++.+.+.|++|++|+....-......+.... +.+-+..+..|++
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y 96 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFN 96 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCC
Confidence 77788888765310 0 11223333456667889999999986444332233333333 3344455556665
Q ss_pred eeee--------------------cC----ChhhH-HHHHHHHHHcC-----Cc--EEEEEeeeCCCccCCHHHHHHHHH
Q 009282 175 MAIT--------------------KW----DEVVS-DEMEVMVKEKG-----IN--SFKFFMAYKGSFMINDELLIEGFK 222 (538)
Q Consensus 175 ~~~~--------------------~~----~~~~~-~~~~~~~~~~g-----~~--~ik~~~~~~~~~~~~~~~l~~~~~ 222 (538)
.... .+ +.+.+ +.+..-. ..| +. .+++.++++.......+.+++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~ 175 (330)
T 3pnz_A 97 KSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEV-ENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVAR 175 (330)
T ss_dssp CGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCchhhccCCHHHHHHHHHHHH-HhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHH
Confidence 4210 00 11111 1122112 223 22 257776664333334577788899
Q ss_pred HHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc-CHHHHHHHH
Q 009282 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIA 301 (538)
Q Consensus 223 ~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~-~~~~~~~i~ 301 (538)
.|++.|+++.+|........+.++.+.+.|.. ..++.+.||. +.+ .+...
T Consensus 176 ~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~----------------------------~~~vvi~H~~~s~~-~e~a~ 226 (330)
T 3pnz_A 176 AHHETKAPIHSHTEAGTMALEQIEILKQENIP----------------------------LEYLSIGHMDRNLD-PYYHK 226 (330)
T ss_dssp HHHHHCCCEEEECGGGCCHHHHHHHHHHTTCC----------------------------GGGEEETTGGGSCC-HHHHH
T ss_pred HHHHHCCeEEEeCCCCcChHHHHHHHHHcCCC----------------------------CCeEEEecCCCCCC-HHHHH
Confidence 99999999999986421122223333333322 1245677985 433 47777
Q ss_pred HHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcC
Q 009282 302 KARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFG 379 (538)
Q Consensus 302 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~ 379 (538)
.+.+.|..+..+-... +++.|. ......+..+.+.|. ++.++||.+..+ .....+
T Consensus 227 ~~l~~G~~i~~~g~~t-------------------~~~~~~---~~~~~~l~~lv~~g~~drilleTD~p~~~-~~~~~G 283 (330)
T 3pnz_A 227 QVAKTGAFMSFDGIAK-------------------IKYAPE---SARIAAILYLVSEGFEDQILVSGDTARKT-YYKHYG 283 (330)
T ss_dssp HHHTTTCEEEECCTTC-------------------TTTCCH---HHHHHHHHHHHHTTCGGGEEECCCCCSGG-GSHHHH
T ss_pred HHHHcCcEEEEccCcc-------------------cCCCCh---HHHHHHHHHHHHcCCCCeEEEeCCCCCCC-CCCccC
Confidence 7888897776543210 000000 011234677777764 789999965321 111000
Q ss_pred ccCcccCCCCCcchhhhHHHHHHHh---hhcCCCCHHH-HHHHHhHhHHHHcCC
Q 009282 380 IDDFRKIPNGVNGIEERMHLVWDTM---VESGQISVTD-YVRLTSTECARIFNV 429 (538)
Q Consensus 380 ~~~~~~~~~g~~g~~~~~~~~~~~~---~~~~~ls~~e-al~~aT~~~A~~lg~ 429 (538)
-..|. ...+...+..+ .+..|+|.++ +.++.|.||+++|++
T Consensus 284 ------~~~~~---~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 284 ------HGPGL---EYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp ------CCSTT---THHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred ------CCCCc---chHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 01111 11112122222 3456799998 999999999999998
No 78
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.69 E-value=8.4e-07 Score=87.46 Aligned_cols=248 Identities=13% Similarity=0.046 Sum_probs=129.3
Q ss_pred HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc-ccceeeeeeeeeec---CChhhHHHHHHHHHH---cC----
Q 009282 128 FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAITK---WDEVVSDEMEVMVKE---KG---- 196 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~g---- 196 (538)
...++.+.++||+|+++.....-......+.+..+..+ ..+...|++..... ..+...+++.++... .|
T Consensus 89 ~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~ 168 (364)
T 3k2g_A 89 IAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGT 168 (364)
T ss_dssp HHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTB
T ss_pred HHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccC
Confidence 34556678899999999864322223344444444433 44555666522111 111123444333211 12
Q ss_pred ---CcEEE-EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh-hhHHHHHHHHHHcCCCCcccccccCCchHHHHH
Q 009282 197 ---INSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (538)
Q Consensus 197 ---~~~ik-~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 271 (538)
+..++ +.+++ .......+.+++.++.|++.|+++.+|..+. ....+.++.+.+.|...
T Consensus 169 ~vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~~---------------- 231 (364)
T 3k2g_A 169 DARIGLIGEIGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADL---------------- 231 (364)
T ss_dssp SCCCSSEEEEECCT-TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCG----------------
T ss_pred CcceeEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCCC----------------
Confidence 22343 44443 1112234567788889999999999998422 22333443333333221
Q ss_pred HHHHHHHHHHcCCCEEEEeccC-HHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHH
Q 009282 272 TTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNK 350 (538)
Q Consensus 272 i~~~l~~~~~~~~~~~~~h~~~-~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~ 350 (538)
.++.+.||.. ..+.+....+.+.|..+..+.......+... .+ ..|. ......
T Consensus 232 ------------~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~-----------~~-~~~~--d~~ra~ 285 (364)
T 3k2g_A 232 ------------RHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQ-----------GV-QCPS--DDEVAR 285 (364)
T ss_dssp ------------GGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTT-----------TE-ECCC--HHHHHH
T ss_pred ------------CceEEECCCCCCCCHHHHHHHHhCCcEEEecCCccccccccc-----------cc-cccc--HHHHHH
Confidence 2356779983 4134778888889987765532100000000 00 0000 001234
Q ss_pred HHHHHHhcCC--ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 351 ALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 351 ~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.++++++.|. ++.+.||.+..+.. . + .|-.+....+..... .+...|+|.+++.++.|.||+++|+
T Consensus 286 ~l~~lv~~gp~drilleTD~p~~~~~-~-----~-----~gg~~~~~l~~~~~~-~l~~~Gis~eei~~~~~~Np~rlf~ 353 (364)
T 3k2g_A 286 AILGLADHGYLDRILLSHDVFVKMML-T-----R-----YGGNGYAFVTKHFLP-RLRRHGLDDAALETLMVTNPRRVFD 353 (364)
T ss_dssp HHHHHHHTTCGGGEEECCCCCSGGGS-G-----G-----GTSCTTSHHHHHHHH-HHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred HHHHHHHhCCcccEEEeCCCCCCCCC-C-----C-----CCCCCcchHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 5777888874 78999996532111 1 1 111222222222222 2234569999999999999999999
Q ss_pred CC
Q 009282 429 VY 430 (538)
Q Consensus 429 ~~ 430 (538)
+.
T Consensus 354 l~ 355 (364)
T 3k2g_A 354 AS 355 (364)
T ss_dssp TT
T ss_pred CC
Confidence 84
No 79
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.66 E-value=1.9e-06 Score=84.82 Aligned_cols=246 Identities=13% Similarity=-0.010 Sum_probs=127.9
Q ss_pred HHHHHHHhCCcEEEeccc-CCCCCCHHHHHHHHHHHhc-ccceeeeeeeeee--cCChhhHHHHHHHHH---HcCC----
Q 009282 129 SGQAAALAGGTTMHIDFV-IPINGSLTAGFEAYEKKAK-NSCMDYGFHMAIT--KWDEVVSDEMEVMVK---EKGI---- 197 (538)
Q Consensus 129 ~~~~~~l~~GvTt~~d~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~g~---- 197 (538)
..+..+.++||||++++. ..........+.+..+..+ ..++..|++.... .+..+..+++.++.. ..|.
T Consensus 79 ~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~~~P~~~~~~~~~L~~~~~~ei~~gi~~t~ 158 (365)
T 3rhg_A 79 FELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEKFEGKRLADDIDAMAKMIDDELNIGIDGTD 158 (365)
T ss_dssp HHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHHHHGGGGGSCHHHHHHHHHHHHHTCSTTSS
T ss_pred HHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCCCCchhhcCCHHHHHHHHHHHHHhccccCC
Confidence 445667889999999987 2212223334444443333 4455666652111 111002233333221 1222
Q ss_pred ---cEEE-EEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEc-CChhhHHHHHHHHHHc-CCCCcccccccCCchHHHH
Q 009282 198 ---NSFK-FFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIEL-GITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 198 ---~~ik-~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 270 (538)
..++ +.+++ .......+.+++.++.|.+. |++|.+|. .......+.++.+.+. +...
T Consensus 159 vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~--------------- 222 (365)
T 3rhg_A 159 IRAGMIGEIGVSP-FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCDP--------------- 222 (365)
T ss_dssp CCCCEEEEEECCT-TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCCG---------------
T ss_pred ceeEEEEEEEcCC-CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCCC---------------
Confidence 2343 33332 11112246677888889999 99999998 4222333444443332 2211
Q ss_pred HHHHHHHHHHHcCCCEEEEecc-CHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCc-cc
Q 009282 271 ATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GH 348 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h~~-~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~ 348 (538)
.++.+.||. +....+....+.+.|..+..+....... |.. ... . ... ..
T Consensus 223 -------------~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~t----------f~~-~~~--~---~~d~~~ 273 (365)
T 3rhg_A 223 -------------AKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDIS----------FPK-EGA--A---PSVMDT 273 (365)
T ss_dssp -------------GGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCB----------CSS-SCB--C---CCHHHH
T ss_pred -------------CceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcccc----------ccc-ccc--c---cchHHH
Confidence 135678998 4233478888888998776553210000 000 000 0 001 12
Q ss_pred HHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHH
Q 009282 349 NKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARI 426 (538)
Q Consensus 349 ~~~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~ 426 (538)
...+.++++.|. .+.+.||.+..++. .. . |-.+....+.... ......|+|.+++.++.|.||+++
T Consensus 274 a~~l~~li~~g~~drilleTD~p~l~~~-~~------~----G~~~~~~l~~~~~-~~~~~~Gis~e~i~~~~~~Np~rl 341 (365)
T 3rhg_A 274 VEAVATLIERGYGNQIVLSHDVFLKQMW-AK------N----GGNGWGFVPNVFL-SLLAQRGIDKTIIDKLCIDNPANL 341 (365)
T ss_dssp HHHHHHHHHTTCGGGEEECCCCCSGGGS-GG------G----TSCTTTHHHHTHH-HHHHHTTCCHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEeCCCCCCCCC-Cc------C----CCCCchhHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 345777888875 78999997543222 11 1 1122222222222 334455699999999999999999
Q ss_pred cCCCC
Q 009282 427 FNVYP 431 (538)
Q Consensus 427 lg~~~ 431 (538)
|++..
T Consensus 342 f~l~~ 346 (365)
T 3rhg_A 342 LAAEN 346 (365)
T ss_dssp HHSCC
T ss_pred HCCCC
Confidence 99843
No 80
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.63 E-value=1.3e-06 Score=82.81 Aligned_cols=246 Identities=17% Similarity=0.161 Sum_probs=125.1
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhccc---ceeeeeeeeeecCChh
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS---CMDYGFHMAITKWDEV 183 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 183 (538)
+||+|+|+....... ...+.......+.++||++++.+... ....+...+..... ...++++..... ...
T Consensus 3 ~iD~H~Hl~~~~~~~-~~~~~~~~l~~~~~~Gv~~~v~~~~~-----~~~~~~~~~~~~~~p~~~~~~g~hP~~~~-~~~ 75 (265)
T 1yix_A 3 LVDSHCHLDGLDYES-LHKDVDDVLAKAAARDVKFCLAVATT-----LPSYLHMRDLVGERDNVVFSCGVHPLNQN-DPY 75 (265)
T ss_dssp EEEEEECGGGSCTTT-TCSSHHHHHHHHHHTTEEEEEECCSS-----HHHHHHHHHHHCSCTTEEEEECCCTTCCS-SCC
T ss_pred EEEEeeCCCchhhcc-cccCHHHHHHHHHHCCCCEEEEeCCC-----HHHHHHHHHHHHHCCCeEEEEEeCCCccc-ccc
Confidence 799999998651100 02234455677888999998865321 11222222222221 112222211110 001
Q ss_pred hHHHHHHHHHHcCCcEEEE-EeeeCC---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 184 VSDEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
..++++++........++. .+++.. ......+.++..++.|.++|+++.+|+.... .+..+.+.+.+
T Consensus 76 ~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~l~~~~------- 146 (265)
T 1yix_A 76 DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDAR--ADTLAILREEK------- 146 (265)
T ss_dssp CHHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHHHHTT-------
T ss_pred hHHHHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEecCch--HHHHHHHHhcC-------
Confidence 3566666653222223321 122211 1122356788899999999999999996421 12222211111
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
..+.++++ |+..... +.+..+.+.|+.+..+... .+..
T Consensus 147 ---------------------~p~~~~v~-H~~~~~~-~~~~~~~~~g~~~~~sg~~-------------~~~~------ 184 (265)
T 1yix_A 147 ---------------------VTDCGGVL-HCFTEDR-ETAGKLLDLGFYISFSGIV-------------TFRN------ 184 (265)
T ss_dssp ---------------------GGGTCEEE-TTCCSCH-HHHHHHHTTTCEEEECGGG-------------GSTT------
T ss_pred ---------------------CCCCCEEE-EcCCCCH-HHHHHHHHCCcEEEECCcc-------------ccCc------
Confidence 12345554 8865554 6666777778766544211 0000
Q ss_pred cCCCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 340 SPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
...+..+++. | -++.++||++...+. ++. |-......+......+.+..+++.+++.+
T Consensus 185 ---------~~~~~~~~~~~~~drll~~TD~P~~~~~-------~~~----g~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 244 (265)
T 1yix_A 185 ---------AEQLRDAARYVPLDRLLVETDSPYLAPV-------PHR----GKENQPAMVRDVAEYMAVLKGVAVEELAQ 244 (265)
T ss_dssp ---------CHHHHHHHHHSCGGGEEECCCBTSCCCT-------TCT----TSCCCGGGHHHHHHHHHHHHTSCHHHHHH
T ss_pred ---------hHHHHHHHHhCChHHEEEecCCCCCCCc-------ccC----CCCCchHHHHHHHHHHHHHhCcCHHHHHH
Confidence 0224455554 3 478999997533221 111 10010112333333333323599999999
Q ss_pred HHhHhHHHHcCCC
Q 009282 418 LTSTECARIFNVY 430 (538)
Q Consensus 418 ~aT~~~A~~lg~~ 430 (538)
+.+.|+++++|++
T Consensus 245 i~~~Na~rl~~l~ 257 (265)
T 1yix_A 245 VTTDNFARLFHID 257 (265)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCcC
Confidence 9999999999984
No 81
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.63 E-value=5.7e-07 Score=87.21 Aligned_cols=154 Identities=12% Similarity=0.042 Sum_probs=97.0
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
++.++.+..+. ...+.+.+..+++.|++.|+++.+|+.+........ .+
T Consensus 161 ~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~----------------------------~a 209 (326)
T 3pao_A 161 AFIAVGLDSSE---VGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIW----------------------------EA 209 (326)
T ss_dssp GCSEEEEESCC---TTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHH----------------------------HH
T ss_pred cceeeCCCCCC---CCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHH----------------------------HH
Confidence 45565553222 234678899999999999999999995432211111 11
Q ss_pred HHHHHHcCCCEEEEeccCHHH-HHHHHHHHHcCCcEEEeccccccccCcccccCCCccccc--ceeecCCCCCcccHHHH
Q 009282 276 IRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA--KYVMSPPIRASGHNKAL 352 (538)
Q Consensus 276 l~~~~~~~~~~~~~h~~~~~~-~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~~~~~l 352 (538)
+. .++.. .+.|+..... .+.++.++++|+.+..||.+. +.++. .+.. .++
T Consensus 210 l~---~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN-------------~~l~~~~~~~~----------hPi 262 (326)
T 3pao_A 210 LD---LLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTVCPLSN-------------TKLCVFDDMSQ----------HTI 262 (326)
T ss_dssp HH---TTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEECHHHH-------------HHTTSSSSGGG----------CCH
T ss_pred Hh---cCCCc-eeeeeeeecccHHHHHHHHHcCCeEEECchhH-------------HHhCCCCCccc----------ChH
Confidence 11 12222 2678766541 278999999999999999873 22211 0111 128
Q ss_pred HHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 353 QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 353 ~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
+.++++|++++++||.+..+.. .+...+..+....++++++ ++.+|.|++++..+
T Consensus 263 ~~ll~~Gv~V~l~TDdp~~~~~---------------------~l~~e~~~a~~~~~l~~~~-l~~l~~nsi~~sf~ 317 (326)
T 3pao_A 263 LDMLERGVKVTVNSDDPAYFGG---------------------YVTENFHALQQSLGMTEEQ-ARRLAQNSLDARLV 317 (326)
T ss_dssp HHHHHHTCCEEECCBSHHHHTC---------------------CHHHHHHHHHHHHCCCHHH-HHHHHHHHHHTCC-
T ss_pred HHHHHCCCeEEEeCCCcccCCC---------------------CHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHh
Confidence 8999999999999996533111 2333333344444699999 57789999988776
No 82
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.59 E-value=1.3e-06 Score=85.19 Aligned_cols=271 Identities=14% Similarity=0.091 Sum_probs=139.8
Q ss_pred cccccccccccccCCCC--------C-hhhH---HHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHH-hcccceeee
Q 009282 106 GGIDPHTHLAMEFMGSE--------T-IDDF---FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYG 172 (538)
Q Consensus 106 GlID~H~H~~~~~~~~~--------~-~~~~---~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 172 (538)
|+..+|=|+.....+.. . .+++ ...+..+.++||+++++............+.+..+. +...++..|
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG 111 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATG 111 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEEC
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcC
Confidence 78888888765422110 1 1122 234556788999999988632222223344444443 324455556
Q ss_pred eeeee------ecCC---hhhHHHHHHHHHH---c-----C--CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 173 FHMAI------TKWD---EVVSDEMEVMVKE---K-----G--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 173 ~~~~~------~~~~---~~~~~~~~~~~~~---~-----g--~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
++..- ..+. ....+++.++... . | +..+++.++++.......+.+++.++.|++.|+++.+
T Consensus 112 ~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPVii 191 (339)
T 3gtx_A 112 FYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIIT 191 (339)
T ss_dssp CCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 55421 0100 1123444433322 1 1 3455777777533333356777888999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc-CHHHHHHHHHHHHcCCcEEE
Q 009282 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~-~~~~~~~i~~~~~~g~~v~~ 312 (538)
|+.......+.++.+.+.+.. ..++.+.||. +.+ .+....+.+.|..+..
T Consensus 192 H~~~gr~a~~~~~iL~~~~~~----------------------------~~~~vi~H~~~~~~-~e~a~~~l~~G~~i~~ 242 (339)
T 3gtx_A 192 HTQEGQQGPQQAELLTSLGAD----------------------------PARIMIGHMDGNTD-PAYHRETLRHGVSIAF 242 (339)
T ss_dssp ECSTTCCHHHHHHHHHHTTCC----------------------------GGGEEECCGGGCCC-HHHHHHHHTTTCEEEE
T ss_pred eCCCCcCHHHHHHHHHHcCCC----------------------------cccEEEEccCCCCC-HHHHHHHHHcCcEEEE
Confidence 994321111233333333321 1235678997 444 4778888888987765
Q ss_pred eccccccccCcccccCCCcccccceeecCCCCCc-ccHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCccCccc-CCC
Q 009282 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRK-IPN 388 (538)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~-~~~~~l~~~l~~Gv--~~~lgtD~~~~~~~~~~~~~~~~~~-~~~ 388 (538)
+..... .+...| .. .....+.++++.|. ++.+.||.+......... .|... ...
T Consensus 243 ~g~~t~-----------------~~~~~p---~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~--~p~~~~~~~ 300 (339)
T 3gtx_A 243 DRIGLQ-----------------GMVGTP---TDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPA--IPEAALPAV 300 (339)
T ss_dssp CCTTCC-----------------SSTTCC---CHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCC--CCGGGHHHH
T ss_pred ccCccc-----------------cccCCC---chHHHHHHHHHHHHhcCCCeEEEecCCCccccCCccc--ccccccccC
Confidence 432100 000000 00 12245677777765 779999965321000000 00000 000
Q ss_pred CCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 389 g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
|.++.. .+...+.......|+|.+++.++.|.||+++|+
T Consensus 301 g~n~p~-~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 301 KDWHPL-HISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp HTCSTT-HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred CCCCch-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 011111 222333344455679999999999999999985
No 83
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.54 E-value=5.4e-06 Score=81.18 Aligned_cols=266 Identities=15% Similarity=0.121 Sum_probs=136.6
Q ss_pred cccccccccccccCCC--------CCh-hh---HHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHH-HHhcccceeee
Q 009282 106 GGIDPHTHLAMEFMGS--------ETI-DD---FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYE-KKAKNSCMDYG 172 (538)
Q Consensus 106 GlID~H~H~~~~~~~~--------~~~-~~---~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 172 (538)
|+.++|-|+...+.+. ... +. ....++.+.+.|+.|++|+....-......+.... +.+-......|
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG 131 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATG 131 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCc
Confidence 7788888875432111 111 11 12234456789999999986554432333333333 33334444555
Q ss_pred eeeeeecCC---------hhhHHHHHHHH-H--HcC-------CcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE
Q 009282 173 FHMAITKWD---------EVVSDEMEVMV-K--EKG-------INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (538)
Q Consensus 173 ~~~~~~~~~---------~~~~~~~~~~~-~--~~g-------~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~ 233 (538)
++....... ....+++.++. + ..| +..+|...++..........+++..++|++.|+++.+
T Consensus 132 ~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~i 211 (360)
T 3tn4_A 132 YYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIIT 211 (360)
T ss_dssp CCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEE
Confidence 554321110 00112222221 1 223 2345654433222222356678888999999999999
Q ss_pred EcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe-ccCHHHHHHHHHHHHcCCcEEE
Q 009282 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH-VMSMDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 234 H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h-~~~~~~~~~i~~~~~~g~~v~~ 312 (538)
|........+.++.+.+.|+.. .++.+.| |.+.+. +..+.+.+.|..+..
T Consensus 212 Ht~~~~~~~e~l~iL~eeG~~~----------------------------~~vvi~H~~~~~d~-~~~~~~l~~G~yl~f 262 (360)
T 3tn4_A 212 HTQEGTMGPEQAAYLLEHGADP----------------------------KKIVIGHMCDNTDP-DYHRKTLAYGVYIAF 262 (360)
T ss_dssp ECSTTCCHHHHHHHHHHTTCCG----------------------------GGEEECCGGGCCCH-HHHHHHHTTTCEEEE
T ss_pred EcCcccCCHHHHHHHHHcCCCC----------------------------CceEEEcCCCCCCH-HHHHHHHHcCCEEEE
Confidence 9965543334444444444431 2467889 455443 778888889988765
Q ss_pred eccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCC--ceEEeCCCC------CCChhhhhcCccCcc
Q 009282 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHC------AFNSTQKAFGIDDFR 384 (538)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv--~~~lgtD~~------~~~~~~~~~~~~~~~ 384 (538)
+..-. ..+...|+ .....+.+..+.+.|- ++.++||.. |..... ++.
T Consensus 263 D~iG~-----------------~~~~~~p~--d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~------p~r 317 (360)
T 3tn4_A 263 DRFGI-----------------QGMVGAPT--DEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPE------PFA 317 (360)
T ss_dssp CCTTC-----------------CCSTTCCC--HHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCH------HHH
T ss_pred ccccc-----------------ccccCCCC--hHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcc------ccc
Confidence 43210 00000010 0112345677888765 789999952 111100 111
Q ss_pred cCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHc
Q 009282 385 KIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIF 427 (538)
Q Consensus 385 ~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~l 427 (538)
....+ .+....+...+..+ +..|+|.+++=++.+.||+++|
T Consensus 318 ~~~~~-~~y~~i~~~~ip~L-~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 318 EMMKN-WHVEHLFVNIIPAL-KNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp HHTTT-CSTTHHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHHH
T ss_pred ccCCC-CCchhHHHHHHHHH-HHcCCCHHHHHHHHHHhHHHHh
Confidence 11111 11111222222222 3346999999999999999987
No 84
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.50 E-value=2.7e-06 Score=79.25 Aligned_cols=233 Identities=15% Similarity=0.105 Sum_probs=130.7
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (538)
|||+|+|+... ++.......+...||..+.. +. +...........+..+..+..+|++........+.++
T Consensus 3 liDtH~HL~~~-------~d~~~vl~~a~~~gV~~i~v-~~--~~~~~~~~~~la~~~~~v~~~~GiHP~~~~~~~~~l~ 72 (254)
T 3gg7_A 3 LIDFHVHLDLY-------PDPVAVARACEERQLTVLSV-TT--TPAAWRGTLALAAGRPHVWTALGFHPEVVSERAADLP 72 (254)
T ss_dssp CEEEEECGGGS-------SSHHHHHHHHHHTTCEEEEC-CS--SGGGHHHHHGGGTTCTTEEECBCCCGGGTTTTGGGTH
T ss_pred eEEEeeCCCCC-------CCHHHHHHHHHHCCCcEEEe-cC--CHHHHHHHHHHHHhCCCeEEEEeeCcccccccHHHHH
Confidence 89999999753 14455577888999997663 21 1122222222222223344455655433222224455
Q ss_pred HHHHHHHHcCCcEEE-EEeeeCCC----ccCCHHHHHHHHHHHHhcCCeEE-EEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 187 EMEVMVKEKGINSFK-FFMAYKGS----FMINDELLIEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 187 ~~~~~~~~~g~~~ik-~~~~~~~~----~~~~~~~l~~~~~~A~~~g~~v~-~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
.+.++. . ...+++ +.+++.-. .....+.+++.++.|+++++++. +|+.... .+.++.+.
T Consensus 73 ~l~~~~-~-~~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~--~~~~~il~----------- 137 (254)
T 3gg7_A 73 WFDRYL-P-ETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAE--SEVLNCLE----------- 137 (254)
T ss_dssp HHHHHG-G-GCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCH--HHHHHHHH-----------
T ss_pred HHHHHh-h-hccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcH--HHHHHHHH-----------
Confidence 666655 2 234444 33444211 11235667888999999999998 9997542 22222221
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCC-CEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceee
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNT-PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~-~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (538)
..+. ...+.|+.+.+. +.++.+.+.|..+..+....
T Consensus 138 --------------------~~~~~~~~v~H~fsG~~-e~a~~~l~~G~yis~~g~~~---------------------- 174 (254)
T 3gg7_A 138 --------------------ANPRSGTPILHWYSGSV-TELRRAISLGCWFSVGPTMV---------------------- 174 (254)
T ss_dssp --------------------HCGGGEEEEEETCCSCH-HHHHHHHHTTCEEEECHHHH----------------------
T ss_pred --------------------HcCCCCcEEEEeCCCCH-HHHHHHHcCCcEEEECcccC----------------------
Confidence 1111 123569887664 77888888888776543310
Q ss_pred cCCCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHH
Q 009282 340 SPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (538)
Q Consensus 340 ~p~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~ 417 (538)
+ ...++++++. + -++.+.||.+..+.. |-...-..+...++.+....+++.+++.+
T Consensus 175 ----~----~~~~~~~v~~ip~drlLlETD~P~~~~r--------------g~~n~P~~v~~v~~~iA~~~g~~~ee~~~ 232 (254)
T 3gg7_A 175 ----R----TQKGAALIRSMPRDRVLTETDGPFLELD--------------GQAALPWDVKSVVEGLSKIWQIPASEVER 232 (254)
T ss_dssp ----T----SHHHHHHHHHSCGGGEEECCCTTTSEET--------------TEECCGGGHHHHHHHHHHHHTSCHHHHHH
T ss_pred ----c----hHHHHHHHHHcCCCeEEEeCCCCccccC--------------CCCCCHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 0 0123444433 2 368999996532111 10000123444444444555699999999
Q ss_pred HHhHhHHHHcCC
Q 009282 418 LTSTECARIFNV 429 (538)
Q Consensus 418 ~aT~~~A~~lg~ 429 (538)
..+.|+.+++++
T Consensus 233 ~~~~N~~~lf~~ 244 (254)
T 3gg7_A 233 IVKENVSRLLGT 244 (254)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHCC
Confidence 999999999998
No 85
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.49 E-value=1.4e-05 Score=77.13 Aligned_cols=261 Identities=13% Similarity=-0.034 Sum_probs=142.2
Q ss_pred cccccccccccccC-C-----CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhc-----ccceeeeee
Q 009282 106 GGIDPHTHLAMEFM-G-----SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-----NSCMDYGFH 174 (538)
Q Consensus 106 GlID~H~H~~~~~~-~-----~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 174 (538)
-|||+|+|+..... + ....++....+..+...||..++..+... ..........+..+ ..+..+|++
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~~~--~~~~~~~~La~~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCL--NDFKKAIEIINKYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSH--HHHHHHHHHHHHHGGGCSSEEEEEECCC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccCCH--HHHHHHHHHHHHCCCcccceEEEEEEEC
Confidence 49999999987621 0 01134566678889999999988664321 12222222333333 344455555
Q ss_pred eeee-cCChh-hHHHHHHHHHHc--CCcEEE-EEeeeCCCc----cCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHHHH
Q 009282 175 MAIT-KWDEV-VSDEMEVMVKEK--GINSFK-FFMAYKGSF----MINDELLIEGFKRCKS-LGALAMVHAENGDAVFEG 244 (538)
Q Consensus 175 ~~~~-~~~~~-~~~~~~~~~~~~--g~~~ik-~~~~~~~~~----~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~~~~ 244 (538)
.... ...++ .++++.+++... .+.+++ +.+++.-.. ....+.+++.++.|++ +++++.+|+.... .+.
T Consensus 105 P~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~--~d~ 182 (325)
T 3ipw_A 105 PTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSW--SDL 182 (325)
T ss_dssp GGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCH--HHH
T ss_pred cchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchH--HHH
Confidence 4322 12222 567777777432 344554 344543211 1224677888999999 9999999996542 233
Q ss_pred HHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcc
Q 009282 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (538)
Q Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~ 324 (538)
++.+.+.+.. ..+ .+.|+.+.+. +.++.+.+.|..+..+.+. +
T Consensus 183 l~iL~~~~~~----------------------------~~~-gViH~FsGs~-e~a~~~l~lG~yis~~G~~----~--- 225 (325)
T 3ipw_A 183 CQLNKELGYN----------------------------GCK-GVVHCFDGTE-EEMNQILNEGWDIGVTGNS----L--- 225 (325)
T ss_dssp HHHHHHTTCT----------------------------TSC-EEECSCCCCH-HHHHHHHHTTCEEEECSGG----G---
T ss_pred HHHHHhcCCC----------------------------CCc-EEEEECCCCH-HHHHHHHhcCcEEeeCccc----c---
Confidence 3333222211 112 3569987775 8888888899877655431 0
Q ss_pred cccCCCcccccceeecCCCCCcccHHHHHHHHhc--CCceEEeCCCCCCChhh-----h-hcCccCcc--cCC-C----C
Q 009282 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQ-----K-AFGIDDFR--KIP-N----G 389 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~--Gv~~~lgtD~~~~~~~~-----~-~~~~~~~~--~~~-~----g 389 (538)
. ....+ ++++. --++.+-||.+-..+.. + ....-|+. .-| . |
T Consensus 226 -------k---------------~~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g 282 (325)
T 3ipw_A 226 -------Q---------------SIELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQ 282 (325)
T ss_dssp -------S---------------SHHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBT
T ss_pred -------C---------------cHHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccC
Confidence 0 00112 23222 22588999965432110 0 00000110 000 0 1
Q ss_pred CcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 390 VNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 390 ~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
-..--..+...++.+....+++++++.+..+.|.-++|+..
T Consensus 283 ~rNeP~~v~~v~~~iA~l~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 283 RRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp TCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCC
T ss_pred CcCcHHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHHhCcC
Confidence 11112234555545555557999999999999999999874
No 86
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=98.43 E-value=1.3e-05 Score=78.71 Aligned_cols=141 Identities=11% Similarity=0.023 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH
Q 009282 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (538)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~ 294 (538)
+.+..+++.|++.|+++.+|+.+........ .++ ..++.. .+.|+...
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~----------------------------~al---~~lg~~-RIgHgv~l 239 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSAEVVK----------------------------EAV---DILKTE-RLGHGYHT 239 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCHHHHH----------------------------HHH---HTSCCS-EEEECGGG
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCChHHHH----------------------------HHH---HccCCc-eeeeeeee
Confidence 6889999999999999999995432211111 111 122333 47888665
Q ss_pred HH-HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCCCCh
Q 009282 295 DA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNS 373 (538)
Q Consensus 295 ~~-~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~~~~ 373 (538)
.. .+.++.++++++.+..||.+. +..+..-.+ ...++..++++|++++++||.+....
T Consensus 240 ~~d~~l~~~l~~~~i~le~cP~SN-------------~~l~~~~~~--------~~hPi~~ll~~Gv~v~l~TDdp~~~~ 298 (367)
T 3iar_A 240 LEDQALYNRLRQENMHFEICPWSS-------------YLTGAWKPD--------TEHAVIRLKNDQANYSLNTDDPLIFK 298 (367)
T ss_dssp GGCHHHHHHHHHTTCEEEECHHHH-------------HHTSSSCTT--------SCCHHHHHHHTTCCEEECCBSHHHHT
T ss_pred cCCHHHHHHHHhCCcEEEECHHHH-------------HHhCCCCCc--------ccChHHHHHHCCCEEEECCCCccccC
Confidence 31 378999999999999999873 222111000 01248999999999999999643210
Q ss_pred hhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 374 TQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
..+...+..+....|+++++ |+.+|.|++++..++
T Consensus 299 ---------------------~~l~~e~~~a~~~~glt~~e-l~~l~~nsi~~sf~~ 333 (367)
T 3iar_A 299 ---------------------STLDTDYQMTKRDMGFTEEE-FKRLNINAAKSSFLP 333 (367)
T ss_dssp ---------------------CCHHHHHHHHHHHHCCCHHH-HHHHHHHHHHTSSSC
T ss_pred ---------------------CCHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHhCCC
Confidence 11333333344444699999 677799999988774
No 87
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.38 E-value=1.2e-05 Score=77.30 Aligned_cols=129 Identities=12% Similarity=-0.015 Sum_probs=71.2
Q ss_pred eeccccccccccccccCC-----CCC---hhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeee
Q 009282 103 VMPGGIDPHTHLAMEFMG-----SET---IDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH 174 (538)
Q Consensus 103 v~PGlID~H~H~~~~~~~-----~~~---~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (538)
+-+++||+|+|++..-.. ... ..+.......+-+.||+.++-..........+.+....+..+..+..+.
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~~-- 100 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGIA-- 100 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEEE--
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEEE--
Confidence 445799999999875111 000 2344555677788999987754321111111222222222222111111
Q ss_pred eeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
.+... ...++++++. +.|+.++++.....+......+.+...++.|.++|+++.+|+..
T Consensus 101 -~v~P~--~~~~eL~~l~-~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~ 159 (294)
T 4i6k_A 101 -VVQHT--TTFNELVNLK-AQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPP 159 (294)
T ss_dssp -CCCTT--CCHHHHHHHH-TTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred -EeCCc--ccHHHHHHHH-HCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence 11111 1235566665 55888888644222222346789999999999999999999864
No 88
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.35 E-value=2.1e-05 Score=75.82 Aligned_cols=261 Identities=11% Similarity=-0.034 Sum_probs=127.5
Q ss_pred cccccccccccccCCC------CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc---cceeeeeeee
Q 009282 106 GGIDPHTHLAMEFMGS------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN---SCMDYGFHMA 176 (538)
Q Consensus 106 GlID~H~H~~~~~~~~------~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 176 (538)
.+||+|+|+....... ....+.......+.++||++++.++.. . ...+...+.... .+..+|++..
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~----~-~~~~~~~~la~~~~~v~~~~GiHP~ 76 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGN----L-QDSKDALHLAQTNGMFFSTVGCHPT 76 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCS----H-HHHHHHHHHHTTCTTEEEEECCCGG
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCC----H-HHHHHHHHHHHHCCCEEEEEEECcC
Confidence 4899999997652110 011345555777889999999877432 1 122222222222 2223333321
Q ss_pred ee-cC----ChhhHHHHHHHHHHc--CCcEEE-EEeeeCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHH
Q 009282 177 IT-KW----DEVVSDEMEVMVKEK--GINSFK-FFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (538)
Q Consensus 177 ~~-~~----~~~~~~~~~~~~~~~--g~~~ik-~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~ 244 (538)
.. .. .++.++++.+++... .+.+++ +.+++.- ......+.+++.++.|.++|+++.+|+.+. ..+.
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a--~~~~ 154 (301)
T 2xio_A 77 RCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNS--HAEF 154 (301)
T ss_dssp GTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESC--HHHH
T ss_pred hhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCc--hHHH
Confidence 11 00 012355666665332 334443 2344321 011123677888999999999999999542 1222
Q ss_pred HHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcc
Q 009282 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (538)
Q Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~ 324 (538)
++.+.+.+ . .....+.|+...+. +.++.+.+.|+.+..+... +
T Consensus 155 ~~il~~~~----------------------------~-~~~~~i~H~f~g~~-~~~~~~l~~g~yi~~~g~~----~--- 197 (301)
T 2xio_A 155 LDITKRNR----------------------------D-RCVGGVVHSFDGTK-EAAAALIDLDLYIGFNGCS----L--- 197 (301)
T ss_dssp HHHHHHTG----------------------------G-GSSCEEETTCCCCH-HHHHHHHHTTCEEEECGGG----S---
T ss_pred HHHHHhcc----------------------------C-CCCcEEEEccCCCH-HHHHHHHhcCcEEEEcccc----c---
Confidence 22221111 0 11124689866544 6777777788766544221 0
Q ss_pred cccCCCcccccceeecCCCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhh-----hhcC---c---cCcccCCC-CC
Q 009282 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQ-----KAFG---I---DDFRKIPN-GV 390 (538)
Q Consensus 325 ~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~-----~~~~---~---~~~~~~~~-g~ 390 (538)
. . ....++++. + -++.++||.+-..... +.+. . .++...+. |.
T Consensus 198 -------~---------~-------~~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~ 254 (301)
T 2xio_A 198 -------K---------T-------EANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDR 254 (301)
T ss_dssp -------S---------S-------HHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTC
T ss_pred -------C---------C-------hHHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCC
Confidence 0 0 011234443 2 4689999965322100 0000 0 00000000 00
Q ss_pred cchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCcc
Q 009282 391 NGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGA 435 (538)
Q Consensus 391 ~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~Gs 435 (538)
+. -..+......+....|++.+++.+..+.|++++|++. .+|.
T Consensus 255 n~-p~~v~~~~~~ia~l~g~~~e~~~~~~~~Na~rlf~~~-~~~~ 297 (301)
T 2xio_A 255 NE-PCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPV-IAEN 297 (301)
T ss_dssp CC-GGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHCCC-----
T ss_pred CC-hHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCch-hhhh
Confidence 11 1122233323333236999999999999999999984 3554
No 89
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.34 E-value=3.5e-05 Score=72.71 Aligned_cols=244 Identities=16% Similarity=0.107 Sum_probs=122.6
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-ecCChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (538)
+||+|+|++.... ..+.......+.+.||+.++...... ...+.+....+..+.....++++... ....++..
T Consensus 2 ~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~P~~~~~~~~~~~ 75 (265)
T 2gzx_A 2 LIDTHVHLNDEQY----DDDLSEVITRAREAGVDRMFVVGFNK--STIERAMKLIDEYDFLYGIIGWHPVDAIDFTEEHL 75 (265)
T ss_dssp CEEEEECTTSGGG----TTTHHHHHHHHHHTTCCEEEEEECSH--HHHHHHHHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred eEEEeeCCCCccc----ccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCEEEEEEeccCccccCCHHHH
Confidence 6999999976511 12344446677889999887654321 11222222222222211122222111 11122345
Q ss_pred HHHHHHHHHcCCcEEEEE-eeeC---CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSFKFF-MAYK---GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~-~~~~---~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+++.++....+..+++.. +++. .......+.++..++.|.++|+++.+|+.... .+..+.
T Consensus 76 ~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~~~~-------------- 139 (265)
T 2gzx_A 76 EWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREAT--QDCIDI-------------- 139 (265)
T ss_dssp HHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHH--------------
T ss_pred HHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecccH--HHHHHH--------------
Confidence 666665532233344321 2221 11123456788999999999999999995431 122211
Q ss_pred cCCchHHHHHHHHHHHHHHHc---CCCEEEEeccCHHHHHHHHHHHH-cCCcEEEeccccccccCcccccCCCcccccce
Q 009282 262 SRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARK-AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~---~~~~~~~h~~~~~~~~~i~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (538)
.... ..+++ .|+..... +.+..+.+ .|+.+..+... .+.
T Consensus 140 -----------------l~~~p~~~~~~i-~H~~~g~~-~~~~~~l~~~~~y~~~sg~~-------------~~~----- 182 (265)
T 2gzx_A 140 -----------------LLEEHAEEVGGI-MHSFSGSP-EIADIVTNKLNFYISLGGPV-------------TFK----- 182 (265)
T ss_dssp -----------------HHHTTGGGTCEE-ETTCCSCH-HHHHHHHHTSCCEEEECGGG-------------GCS-----
T ss_pred -----------------HHhcCCCCCcEE-EEcCCCCH-HHHHHHHHHCCceEEeccee-------------ecC-----
Confidence 2222 24554 57654332 44555555 67655433211 000
Q ss_pred eecCCCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHH
Q 009282 338 VMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (538)
Q Consensus 338 ~~~p~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~ea 415 (538)
.+ ..+..+++. | -++.++||++...+. ++. |.......+......+....++|.++.
T Consensus 183 ---~~-------~~~~~~i~~~~~dril~gSD~P~~~~~-------~~~----g~~~~~~~~~~~~~~l~~~~~~~~~~~ 241 (265)
T 2gzx_A 183 ---NA-------KQPKEVAKHVSMERLLVETDAPYLSPH-------PYR----GKRNEPARVTLVAEQIAELKGLSYEEV 241 (265)
T ss_dssp ---SC-------CHHHHHHHHSCTTTEEECCCTTSCCCT-------TCT----TSCCCGGGHHHHHHHHHHHTTCCHHHH
T ss_pred ---Cc-------HHHHHHHHhCChhhEEEccCCCCCCCc-------ccC----CCCCChHHHHHHHHHHHHHhCCCHHHH
Confidence 00 124444444 3 589999997533221 111 111112233333333334346999999
Q ss_pred HHHHhHhHHHHcCCC
Q 009282 416 VRLTSTECARIFNVY 430 (538)
Q Consensus 416 l~~aT~~~A~~lg~~ 430 (538)
-+..+.|+++++++.
T Consensus 242 ~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 242 CEQTTKNAEKLFNLN 256 (265)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999999999984
No 90
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.34 E-value=8.8e-06 Score=77.12 Aligned_cols=246 Identities=16% Similarity=0.123 Sum_probs=124.9
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeee-ecCChhhH
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (538)
++|+|+|+.... ...+.......+.++||+.++.+... ....+.+....+..+..+..+|++... ....++.+
T Consensus 13 ~~~~~~hl~~~~----~~~~~~~~l~~~~~~GV~~~v~~~~~--~~~~~~~~~l~~~~p~i~~~~G~hP~~~~~~~~~~~ 86 (268)
T 1j6o_A 13 MVDTHAHLHFHQ----FDDDRNAVISSFEENNIEFVVNVGVN--LEDSKKSLDLSKTSDRIFCSVGVHPHDAKEVPEDFI 86 (268)
T ss_dssp EEEEEECTTSGG----GTTTHHHHHHTTTTTTEEEEEEECSS--HHHHHHHHHHHTTCTTEEEEECCCGGGGGGCCTTHH
T ss_pred ccccccCCCChh----hccCHHHHHHHHHHcCCCEEEEeCCC--HHHHHHHHHHHHHCCCEEEEEeeccccccccCHHHH
Confidence 689999997651 12334444666778999988876432 111122222222222222223332211 11223445
Q ss_pred HHHHHHHHHcCCcEEEE-EeeeCC---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccc
Q 009282 186 DEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (538)
+++.++........++. .+++.- ......+.++..++.|.++|+++.+|+.... ...++.+.+.+.
T Consensus 87 ~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~~--~~~~~il~~~p~-------- 156 (268)
T 1j6o_A 87 EHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAY--SEAYEILRTESL-------- 156 (268)
T ss_dssp HHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCH--HHHHHHHHHSCC--------
T ss_pred HHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCchH--HHHHHHHHhcCC--------
Confidence 66666552222223321 123211 1123467788999999999999999985321 122222211110
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecC
Q 009282 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (538)
Q Consensus 262 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 341 (538)
...++++ |+..... +.+..+.+.|+.+..+... .+ .
T Consensus 157 --------------------~~~~~I~-H~~~g~~-~~~~~~~~~g~y~~~sg~~-------------------~~--~- 192 (268)
T 1j6o_A 157 --------------------PEKRGVI-HAFSSDY-EWAKKFIDLGFLLGIGGPV-------------------TY--P- 192 (268)
T ss_dssp --------------------CSSCEEE-TTCCSCH-HHHHHHHHHTEEEEECGGG-------------------GC--T-
T ss_pred --------------------CCCCEEE-EcCCCCH-HHHHHHHHCCCeEEecccc-------------------cc--c-
Confidence 0345666 9866554 6666666667555433211 00 0
Q ss_pred CCCCcccHHHHHHHHhc-C-CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHH
Q 009282 342 PIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (538)
Q Consensus 342 ~~r~~~~~~~l~~~l~~-G-v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~a 419 (538)
....++.+++. | -++.++||++...+. ++....+. -..+......+....++|.++.-+..
T Consensus 193 ------~~~~l~~~i~~~~~driL~eTD~P~~~~~-------~~~g~~n~----p~~~~~~~~~la~~~~~~~e~~~~i~ 255 (268)
T 1j6o_A 193 ------KNEALREVVKRVGLEYIVLETDCPFLPPQ-------PFRGKRNE----PKYLKYVVETISQVLGVPEAKVDEAT 255 (268)
T ss_dssp ------TCHHHHHHHHHHCGGGEEECCCBTSCCCG-------GGTTSCCC----GGGHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred ------chHHHHHHHHhCChhhEEEecCCCCCCCc-------ccCCCCCc----hHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 00224444443 3 478999996533221 11100000 11233333333332359999999999
Q ss_pred hHhHHHHcCC
Q 009282 420 STECARIFNV 429 (538)
Q Consensus 420 T~~~A~~lg~ 429 (538)
+.|+++++++
T Consensus 256 ~~Na~rlf~l 265 (268)
T 1j6o_A 256 TENARRIFLE 265 (268)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhCc
Confidence 9999999987
No 91
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=98.13 E-value=0.0001 Score=69.79 Aligned_cols=51 Identities=14% Similarity=-0.012 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcCC
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAEN 237 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~~ 237 (538)
+..++++++.++.|+.+++.+.... . ..+.+..+++.|.++ |+++.+|+..
T Consensus 102 ~~~~el~~~~~~~g~~gi~~~g~~~---~-~~~~~~~~~~~a~~~~~lpv~iH~~~ 153 (272)
T 3cjp_A 102 DTNSYIEENIVNNKLVGIGELTPAS---G-QIKSLKPIFKYSMDSGSLPIWIHAFN 153 (272)
T ss_dssp HHHHHHHHHTTTTTCSEEEEECCCT---T-CGGGGHHHHHHHHHTTCCCEEECCST
T ss_pred HHHHHHHHHHHhcCceEEEecCCCC---C-ccHHHHHHHHHHHhccCCcEEEeCCC
Confidence 4556676655457888888643221 2 667899999999999 9999999964
No 92
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=98.11 E-value=3.6e-05 Score=73.62 Aligned_cols=127 Identities=10% Similarity=-0.002 Sum_probs=71.5
Q ss_pred ccccccccccccccC----C----CCChhhHHHHHHHHHhCCcEEEecccCC-CCCCHHHHHHHHHHHhcccceeeeeee
Q 009282 105 PGGIDPHTHLAMEFM----G----SETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHM 175 (538)
Q Consensus 105 PGlID~H~H~~~~~~----~----~~~~~~~~~~~~~~l~~GvTt~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
+++||+|+|++.... + .....+.......+-+.||+..+-.... .........+. .+..+.-+..+.
T Consensus 12 ~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~-~~~~p~r~~~~~--- 87 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSA-LQTVPGQLRGVV--- 87 (288)
T ss_dssp CCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHH-HHHSTTTBCCBB---
T ss_pred CCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHH-HHHCCCCEEEEE---
Confidence 379999999976410 0 0001233444566678999977644321 11112222222 222221111111
Q ss_pred eeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
.+... ...++++++. +.|+.++++...+.+......+.+..+++.|.++|+++.+|+...
T Consensus 88 ~v~p~--~~~~el~~~~-~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 147 (288)
T 2ffi_A 88 MLERD--VEQATLAEMA-RLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA 147 (288)
T ss_dssp CCCSS--CCHHHHHHHH-TTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT
T ss_pred EeCCC--CCHHHHHHHH-HCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh
Confidence 11111 1135666666 568999988766543334567889999999999999999998643
No 93
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=98.09 E-value=5.3e-05 Score=73.94 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCC-----CccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKG-----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~-----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
+..++++++.++.|+.++++..++.. ....+.+.+..+++.|.++|+++.+|...
T Consensus 108 ~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 167 (327)
T 2dvt_A 108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRN 167 (327)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 46778888775679999988766531 23456788999999999999999999854
No 94
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.85 E-value=0.0005 Score=66.22 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
++..++++++.++.|+.++++..++.+. ..+.+.+..+++.|.++|+++.+|....
T Consensus 103 ~~~~~el~~~~~~~g~~gi~~~~~~~~~-~~~~~~~~~~~~~a~~~~lpv~iH~~~~ 158 (307)
T 2f6k_A 103 LDAVKTVQQALDQDGALGVTVPTNSRGL-YFGSPVLERVYQELDARQAIVALHPNEP 158 (307)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETTE-ETTCGGGHHHHHHHHTTTCEEEEECCCC
T ss_pred HHHHHHHHHHHhccCCcEEEEeccCCCC-CCCcHhHHHHHHHHHHcCCeEEECCCCC
Confidence 4567788887756799999887776442 3456789999999999999999999643
No 95
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.77 E-value=0.00051 Score=64.21 Aligned_cols=161 Identities=13% Similarity=0.033 Sum_probs=86.3
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEecccCCCCC--CHH---HHHHHHH-------HHh-cccceeeee
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLT---AGFEAYE-------KKA-KNSCMDYGF 173 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~---~~~~~~~-------~~~-~~~~~~~~~ 173 (538)
|||+|+|+... . .+ ....+..+||+.++..+..... ... +..+... +.. ...+..+|+
T Consensus 2 ~iDtH~Hld~~--~---~~----~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~Gi 72 (261)
T 3guw_A 2 YFDSHLHSEGL--G---FS----ELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGI 72 (261)
T ss_dssp CCBCCCCGGGC--C---HH----HHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCC
T ss_pred eEEeccCCCCC--C---hH----HHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 79999999764 2 22 2566788999999876533211 111 1122211 111 123444555
Q ss_pred eeeeecCChhhHHHHHHHHHHcCCcEEE-EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh---hhHHHHHHHHH
Q 009282 174 HMAITKWDEVVSDEMEVMVKEKGINSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG---DAVFEGQKRMI 249 (538)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~g~~~ik-~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~---~~~~~~~~~~~ 249 (538)
+..... +. .++..+..++..+.+++ +.+++. .....+.+++.++.|+++++++.+|+... ....+.++.+.
T Consensus 73 HP~~~~--~~-~~~~~~~l~~~~vvaIGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~ 147 (261)
T 3guw_A 73 HPRCIP--PD-YEFVLGYLEEGEWVAFGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILE 147 (261)
T ss_dssp CGGGCC--TT-THHHHHHHTTSCCSCEEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHH
T ss_pred Cccccc--cc-HHHHHHHhCcCCeEEEEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHH
Confidence 543221 11 12222223234555664 334442 12235678889999999999999999653 22233333332
Q ss_pred HcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEe
Q 009282 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (538)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~ 313 (538)
+.+.. ..+..+.|++. +.++.+.+.|..+..+
T Consensus 148 ~~~~~----------------------------~~~~vi~H~~~----~~a~~~l~~G~yis~~ 179 (261)
T 3guw_A 148 SLDFP----------------------------ADLAVIDHVNF----ETLDMVLETEYWIGLT 179 (261)
T ss_dssp HTTCC----------------------------TTSEEEESCCT----TTHHHHHTSSSEEEEE
T ss_pred HcCCC----------------------------CCCEEEEeCCH----HHHHHHHhCCEEEEec
Confidence 22221 12346779832 5666777889877665
No 96
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.72 E-value=0.0022 Score=61.57 Aligned_cols=151 Identities=13% Similarity=0.067 Sum_probs=84.4
Q ss_pred eecccccccccccccc-----C-C-CCCh--hhHHHHHHHHHhCCcEEEecccCCC-CCCHHHHHHHHHHHhcccceeee
Q 009282 103 VMPGGIDPHTHLAMEF-----M-G-SETI--DDFFSGQAAALAGGTTMHIDFVIPI-NGSLTAGFEAYEKKAKNSCMDYG 172 (538)
Q Consensus 103 v~PGlID~H~H~~~~~-----~-~-~~~~--~~~~~~~~~~l~~GvTt~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 172 (538)
+=||.||+|.|++... . + ...+ -..+.....+-+.||+..+-..... .......++...+...+ +..+.
T Consensus 23 ~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r-~~Gva 101 (303)
T 4d9a_A 23 PPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGK-ARGIA 101 (303)
T ss_dssp CCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTS-EEEEE
T ss_pred CCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCc-EEEEE
Confidence 4568999999998631 1 0 0111 1122334445567888766432111 11222233333332222 22222
Q ss_pred eeeeeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcC
Q 009282 173 FHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (538)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g 252 (538)
. . ... ...++++++. +.|+.++++.........++.+.+..+++.+.+ |+++.+|+....
T Consensus 102 -~--v-dp~-~~~~eL~~l~-~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~------------- 161 (303)
T 4d9a_A 102 -V--V-DPA-IDEAELAALH-EGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEADI------------- 161 (303)
T ss_dssp -C--C-CTT-CCHHHHHHHH-HTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGGG-------------
T ss_pred -E--e-CCC-CCHHHHHHHH-HCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEeccccc-------------
Confidence 1 1 111 1235666665 569999988665431234678899999999999 999999986432
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC
Q 009282 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (538)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~ 293 (538)
+..+.+++..++.++++.|+..
T Consensus 162 -------------------l~~l~~~~~~~~~~iVidH~G~ 183 (303)
T 4d9a_A 162 -------------------LEELRPFMDAIPVPIVIDHMGR 183 (303)
T ss_dssp -------------------HHHHHHHHHHCSSCEEEGGGGC
T ss_pred -------------------HHHHHHHHHHCCCcEEEeCCCC
Confidence 2223344555578899999875
No 97
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=97.54 E-value=0.00067 Score=66.92 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.++..+...++.|++.|+++.+|+.+...-.+ .+..++. .++.. .+.|.
T Consensus 194 ~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~---------------------------~i~~al~---~lga~-RIgHG 242 (380)
T 4gxw_A 194 RPPELFWKAYRDARAAGFRTTAHAGEFGMPWR---------------------------NVETAVD---LLHVD-RVDHG 242 (380)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEEESCTTCCHH---------------------------HHHHHHH---TSCCS-EEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeccccCCchH---------------------------HHHHHHH---HcCCc-ccccc
Confidence 45677899999999999999999954321111 1222221 11221 36665
Q ss_pred cCH-HHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCCC
Q 009282 292 MSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (538)
Q Consensus 292 ~~~-~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~~ 370 (538)
... .+.+.++.++++++++..||.+.... +.. |.. ..-..-++..+++.|++++++||.+.
T Consensus 243 ~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l-------------~~v----~~~-~~~~~HP~~~l~~~Gv~vtinTDDp~ 304 (380)
T 4gxw_A 243 YTIVDNPELCARYAERGIVFTVVPTNSYYL-------------RTL----PPD-QWAERHPMRKMPGLGLKIHPNTDDPT 304 (380)
T ss_dssp GGGGGCHHHHHHHHHHTCEEEECTTCHHHH-------------HHS----CTT-THHHHCGGGGTGGGTCEEEECCBSHH
T ss_pred eeeccChHHHHHHHHhCceeEECCcchhhh-------------ccc----ccc-cccccChHHHHHHCCCeEEECCCCch
Confidence 432 22378889999999999999873221 000 000 00000126788999999999999652
Q ss_pred CChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
. + ...+...+..+....|++.+|..+ .+.|+.+...++
T Consensus 305 ~------------f---------~t~Ls~Ey~~~~~~~gls~~dl~~-l~~nsi~~sF~~ 342 (380)
T 4gxw_A 305 L------------H---------KVNPSEAWELMFSHFGFTIADLKQ-FMLNGIDGAWVD 342 (380)
T ss_dssp H------------H---------TCCHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHSSSC
T ss_pred h------------h---------CCCHHHHHHHHHHHhCcCHHHHHH-HHHHHHHHHcCC
Confidence 2 1 112444444555667799999665 578888877663
No 98
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.0035 Score=61.76 Aligned_cols=132 Identities=11% Similarity=0.046 Sum_probs=74.6
Q ss_pred ccccccccccccccCC------CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcc-----cceeeee
Q 009282 105 PGGIDPHTHLAMEFMG------SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-----SCMDYGF 173 (538)
Q Consensus 105 PGlID~H~H~~~~~~~------~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 173 (538)
+-|||+|+|+...... ....+++...+..+...||+.++..+.... .....++ ..+..+. .+..+|+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~~l~-~s~~~~~-La~~~~~~~~~~l~~tvGv 89 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIA-ESQSAIE-LVSSVKDLSPLKLYHTIGV 89 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHH-HHHHHHH-HHHHHTTTCSSEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecCCHH-HHHHHHH-HHHHCCCccccceEEEEEE
Confidence 4699999999876221 123456777788999999999886643211 1222222 2222222 2455666
Q ss_pred eeeeec-CCh------------------------------------hhHHHHHHHHHH------cCCcEEE-EEeeeCCC
Q 009282 174 HMAITK-WDE------------------------------------VVSDEMEVMVKE------KGINSFK-FFMAYKGS 209 (538)
Q Consensus 174 ~~~~~~-~~~------------------------------------~~~~~~~~~~~~------~g~~~ik-~~~~~~~~ 209 (538)
+..... ... +.++++..++.+ ..+.+++ +.+++.-.
T Consensus 90 HP~~~~e~~~~~~~~~~~~~~~~p~~d~~~~~~l~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~ 169 (401)
T 3e2v_A 90 HPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRF 169 (401)
T ss_dssp CGGGGGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCT
T ss_pred CcChhhhcccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcC
Confidence 542211 111 124555555422 2234444 44565321
Q ss_pred c----cCCHHHHHHHHHHHHhc----CCeEEEEcCCh
Q 009282 210 F----MINDELLIEGFKRCKSL----GALAMVHAENG 238 (538)
Q Consensus 210 ~----~~~~~~l~~~~~~A~~~----g~~v~~H~~~~ 238 (538)
. ....+.+++.++.|.++ ++++.+|+...
T Consensus 170 ~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A 206 (401)
T 3e2v_A 170 HYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSA 206 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecch
Confidence 1 12345677888899999 99999999654
No 99
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=97.47 E-value=0.0031 Score=60.17 Aligned_cols=229 Identities=13% Similarity=0.015 Sum_probs=121.4
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccceeeeeeeeeecCC-hhhHHHHHHHHHHcCCcEEEE
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKF 202 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ik~ 202 (538)
.......+-+.||+..+-....... ...+.+....+..+.-+.. ...+.... ++..+++++ ..+.|+.++++
T Consensus 49 ~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~---~~~v~p~~~~~a~~eL~~-~~~~g~~Gi~~ 124 (291)
T 3irs_A 49 LELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHP---VGSIEAATRKEAMAQMQE-ILDLGIRIVNL 124 (291)
T ss_dssp HHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEE---EEECCCSSHHHHHHHHHH-HHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEE---EEecCccCHHHHHHHHHH-HHhCCCeEEEE
Confidence 3444566678999877754332110 1223333333333321111 11222233 456778888 55889999998
Q ss_pred EeeeCC-CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHH
Q 009282 203 FMAYKG-SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (538)
Q Consensus 203 ~~~~~~-~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 281 (538)
...+.+ ....+.+.+..+++.|.++|+++.+|...... - .. .+ .. ...+ ..+...
T Consensus 125 ~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~------------~-~~-~~--~~-----p~~~---~~v~~~ 180 (291)
T 3irs_A 125 EPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAG------------P-DI-TY--TN-----PEHI---DRVLGD 180 (291)
T ss_dssp CGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCS------------S-SG-GG--GC-----HHHH---HHHHHH
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCC------------C-CC-cc--CC-----HHHH---HHHHHH
Confidence 755432 23356788999999999999999999964310 0 00 00 00 1122 223333
Q ss_pred -cCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhc-C
Q 009282 282 -VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G 359 (538)
Q Consensus 282 -~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~-G 359 (538)
.+.++++.|+......+.++.+.+. -++...+... + ...| ....+.++++. |
T Consensus 181 ~P~l~ivl~H~G~~~~~~~~~l~~~~-~nvy~~~Sg~-~------------------~~~~------~~~~~~~~~~~~g 234 (291)
T 3irs_A 181 FPDLTVVSSHGNWPWVQEIIHVAFRR-PNLYLSPDMY-L------------------YNLP------GHADFIQAANSFL 234 (291)
T ss_dssp CTTCCEEEEGGGTTCHHHHHHHHHHC-TTEEEECGGG-G------------------SSST------THHHHHHHHTTGG
T ss_pred CCCCEEEeecCCcccHHHHHHHHhHC-CCeEecHHHH-h------------------ccCC------CHHHHHHHHHHhC
Confidence 3678899998765432444433222 2344333210 0 0000 01223333332 3
Q ss_pred -CceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCCCCCc
Q 009282 360 -ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434 (538)
Q Consensus 360 -v~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~~~~G 434 (538)
-++.+|||++-... ...+..+... ++|.++.=+..+.|+++++++..+-|
T Consensus 235 ~drllfgSD~P~~~~------------------------~~~~~~~~~l-~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 235 ADRMLFGTAYPMCPL------------------------KEYTEWFLTL-PIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp GGTBCCCCCBTSSCH------------------------HHHHHHHHTS-SCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred cceEEEecCCCCCCH------------------------HHHHHHHHHC-CCCHHHHHHHHHHHHHHHhCcccccc
Confidence 26889999643221 1112222233 69999999999999999999966555
No 100
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.36 E-value=0.0016 Score=62.66 Aligned_cols=128 Identities=9% Similarity=-0.087 Sum_probs=67.0
Q ss_pred cccccccccccc---CCCC--------ChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeee
Q 009282 107 GIDPHTHLAMEF---MGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM 175 (538)
Q Consensus 107 lID~H~H~~~~~---~~~~--------~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
.||+|.|++... .... ..-........+-.+||+.++-..........+.+.... .....-.++.+
T Consensus 5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la---~~~p~~~g~vg 81 (303)
T 4do7_A 5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELA---CDEARIAAVVG 81 (303)
T ss_dssp CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHH---TTCTTEEEEEE
T ss_pred EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHH---HhCCCeEEEEE
Confidence 399999998641 0011 011223335566789999877543221111112222222 22111122211
Q ss_pred eeecCChhhHHHHHHHHHHcCCcEEEEEeeeCCCc--cCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
.......+..++++++. ..|+.+++....+.... ....+.+...++.+.++|+++.+|....
T Consensus 82 ~v~~~~~~~~~~L~~l~-~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~ 145 (303)
T 4do7_A 82 WEDLRAPQLAERVAEWR-GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER 145 (303)
T ss_dssp CCCTTCTTHHHHHTTCC-SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG
T ss_pred EeCCCCchHHHHHHHHh-hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH
Confidence 12222223455666655 56777777654322111 2455678899999999999999998643
No 101
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=97.09 E-value=0.00048 Score=72.66 Aligned_cols=101 Identities=10% Similarity=0.011 Sum_probs=65.1
Q ss_pred EEeccCHHH-HHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeC
Q 009282 288 VVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (538)
Q Consensus 288 ~~h~~~~~~-~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgt 366 (538)
+.|+..... ...++.+++.++.+..||.+. ......+..- ++..++++|++++|+|
T Consensus 541 IgHGv~l~edp~Li~lla~~~I~vevCP~SN-------------~kl~~~~~~H----------Pi~~ll~~Gv~VsLgT 597 (701)
T 2a3l_A 541 IAHGINLRKSPVLQYLYYLAQIGLAMSPLSN-------------NSLFLDYHRN----------PFPVFFLRGLNVSLST 597 (701)
T ss_dssp CSCCGGGGGCHHHHHHHHHHTCCEEECHHHH-------------TTTTCCSTTC----------SHHHHHHTTCCEEECC
T ss_pred EEEEeecccCHHHHHHHHHcCCcEEECccch-------------hhhccCchHh----------HHHHHHHCCCcEEEeC
Confidence 466655433 245788999999999999973 2222222111 2889999999999999
Q ss_pred CCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 367 D~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
|.+...... ...+...+..+....+++..++.++ |.|++++.+++
T Consensus 598 Ddp~~~~~t------------------~~dL~~Ey~~aa~~~~ls~~dl~~l-a~Ns~~asfl~ 642 (701)
T 2a3l_A 598 DDPLQIHLT------------------KEPLVEEYSIAASVWKLSACDLCEI-ARNSVYQSGFS 642 (701)
T ss_dssp BCHHHHCCS------------------SSHHHHHHHHHHHHHTCCHHHHHHH-HHHHHHHSCCC
T ss_pred CCccccCCC------------------CcCHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHhCCC
Confidence 976432110 0012222323333346999997776 99999999985
No 102
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=96.70 E-value=0.035 Score=56.53 Aligned_cols=108 Identities=14% Similarity=0.066 Sum_probs=68.0
Q ss_pred CHHHHHHHHHH--HHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe
Q 009282 213 NDELLIEGFKR--CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 213 ~~~~l~~~~~~--A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h 290 (538)
+...+..+++. |++.|+++.+|+.+.... |. .+ .+.+..++. ++.. .+.|
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~----------g~---------~~----~~~i~~Al~----Lga~-RIgH 358 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQ----------GT---------SI----DRNILDALM----LNTT-RIGH 358 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCC----------SS---------TT----TTHHHHHHH----TTCS-SEEE
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCC----------CC---------Cc----HHHHHHHHh----cCCc-eeee
Confidence 56678888887 889999999999543110 00 00 012333332 2322 3678
Q ss_pred ccCHH-HHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCcccHHHHHHHHhcCCceEEeCCCC
Q 009282 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (538)
Q Consensus 291 ~~~~~-~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~l~~~l~~Gv~~~lgtD~~ 369 (538)
+.... +.+.++.+++.++.+..||.+......- ..+.. .++..++++|++++++||.+
T Consensus 359 Gv~l~~dp~l~~~l~~~~I~levCP~SN~~l~~v-----------~~~~~----------hP~~~ll~~Gv~V~l~TDdp 417 (508)
T 3lgd_A 359 GFALSKHPAVRTYSWKKDIPIEVCPISNQVLKLV-----------SDLRN----------HPVATLMATGHPMVISSDDP 417 (508)
T ss_dssp CTTGGGCHHHHHHHHHTTCCEEECHHHHHHTTSC-----------SSGGG----------CTHHHHHHTTCCEEECCBSH
T ss_pred eEecCccHHHHHHHHhcCCeEEECcchHHHhCCC-----------CCccc----------ChHHHHHHCCCcEEEcCCCc
Confidence 77654 1378899999999999999973221110 01111 12889999999999999965
No 103
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=96.69 E-value=0.027 Score=54.15 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
+...+++++..++.|..++++.....+ ..++.+.+..+++.+.++|+++.+|...
T Consensus 110 ~~a~~el~r~~~~~G~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 110 ESACKVISSIKDDENLVGAQIFTRHLG-KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESEETT-EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCceEeccCCCCC-CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 346778888875679999998766544 3456788999999999999999999853
No 104
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=96.10 E-value=0.19 Score=49.07 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
+...+++++..++.|..++++...+.+ ..++.+.+..+++.+.++|++|.+|....
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~~-~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQD-GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBTT-BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCC-CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 356788888765789999998754433 34577889999999999999999999653
No 105
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=94.43 E-value=0.7 Score=42.80 Aligned_cols=39 Identities=26% Similarity=0.163 Sum_probs=29.0
Q ss_pred ccccccccccc-cCCCCChhhHHHHHHHHHhCCcEEEecc
Q 009282 107 GIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDF 145 (538)
Q Consensus 107 lID~H~H~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~d~ 145 (538)
+||.|+|+..+ -.|..+.+.....++.+.+.|++.+.-+
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T 40 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIAT 40 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 58999999753 1255566665567899999999999743
No 106
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=93.50 E-value=0.32 Score=47.00 Aligned_cols=54 Identities=22% Similarity=0.261 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
+..+++++..++.|..++++...+.+ ...+.+.+..+++.|.++|+++.+|+..
T Consensus 124 ~a~~el~~~~~~~g~~Gv~l~~~~~~-~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 124 LAVKEMERCVKELGFPGVQIGTHVNE-WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHccCCeEEEECCcCCC-CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 56778888775679999998766544 3456788999999999999999999964
No 107
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=93.31 E-value=2.7 Score=41.09 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
...+++++..++.|..++++.....+ ..++.+.+..+++.+.++|++|.+|....
T Consensus 160 ~a~~EL~r~~~~~G~~Gv~l~~~~~g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 160 WSAREIHRGARELGFKGIQINSHTQG-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHHTSCCCCEEECSCBTT-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHhhcCceEEEECCCCCC-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 45678888875569999998655443 34567889999999999999999999543
No 108
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=92.73 E-value=0.45 Score=45.90 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
+...+++++.. +.|..++++...+.+ ..++.+.+..+++.|.++|+++.+|+..
T Consensus 127 ~~a~~el~~~~-~~g~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 127 DLACKEASRAV-AAGHLGIQIGNHLGD-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHH-HHTCCCEEEESCBTT-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHH-HcCCeEEEECCCCCC-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 35677888888 789999988765544 3456789999999999999999999964
No 109
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=76.13 E-value=38 Score=32.69 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=38.2
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
|+ .++||||.-.. ...|.|+.. ...++.+...+.+.| +|.+++=+.+-.|..+.+..
T Consensus 279 G~dhVgiGsDfdG~------------~~~p~gl~d-~~~~p~l~~~L~~~G-~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 279 GARAVGFGGDFDGV------------PRVPEGLED-VSKYPDLIAELLRRN-WTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp CGGGEEECCCTTSC------------SCCCBTCSS-TTCHHHHHHHHHHTT-CCHHHHHHHHTHHHHHHHHH
T ss_pred CCCeEEECCCCCCC------------CCCCCCCCC-HHHHHHHHHHHHHcC-CCHHHHHHHHhHhHHHHHHH
Confidence 65 58999996321 122333333 234566665566655 99999999999999998875
No 110
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=75.99 E-value=2.3 Score=38.77 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=29.9
Q ss_pred cccccccccccccc-CCCCChhhHHHHHHHHHhCCcEEEec
Q 009282 105 PGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHID 144 (538)
Q Consensus 105 PGlID~H~H~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~d 144 (538)
.|++|.|+|...+. -|..+.+.....++.+.+.|++.+.-
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~ 43 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVS 43 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEEC
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 46899999995432 25556666667789999999999873
No 111
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=75.08 E-value=8.8 Score=36.89 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCC----CccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
++..+++++..++.|..++++..++.+ ....+.+.+..+++.|.++|+++.+|....
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 567788888886789999988655322 123567889999999999999999999653
No 112
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=72.56 E-value=28 Score=31.37 Aligned_cols=103 Identities=13% Similarity=-0.091 Sum_probs=66.4
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 264 (538)
..+.-+.+++.|.+.+.++.... ....+.+.++++.+..+++|+.+..+.....
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~------------------------- 85 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHL-PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM------------------------- 85 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTS-CTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE-------------------------
T ss_pred HHHHHHHHHHhCCCEEEEecccC-CCCCCHHHHHHHHHHHHHcCCeEEEEecccc-------------------------
Confidence 44444444588999998764311 2234678888888999999999887653221
Q ss_pred chHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEecc
Q 009282 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 265 ~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~ 315 (538)
...+.+.+.++.+..+|.+.+..|.....-.+..+.+++.|+.+..++.
T Consensus 86 --~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 86 --KSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp --CSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEEEEECC
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 0125577788888888888877775432222444555667887766654
No 113
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=71.81 E-value=24 Score=31.91 Aligned_cols=105 Identities=10% Similarity=0.001 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeC------C---CccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYK------G---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~------~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
..+.-+.+++.|.+.+-++.... + ....+.+.++++.+.++++|+.+..|......
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~--------------- 88 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAE--------------- 88 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCS---------------
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCc---------------
Confidence 33444444488999998865321 1 23356788889999999999999887632210
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEEEeccc
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~~~~~~ 316 (538)
..+.+.+.++.+..+|.+.+..|.....-.+..+.+++.|+.+..++.+
T Consensus 89 ------------~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 89 ------------KSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp ------------STTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCS
T ss_pred ------------cHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 0144677888888899888888754322124445556778887766553
No 114
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=71.49 E-value=59 Score=29.38 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=25.2
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
++|.|+|...+..|..+++ ...+.+.+.|++.+.
T Consensus 1 ~~DlH~Ht~~S~DG~~~~e---e~v~~A~~~Gl~~ia 34 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPE---AYLEEARAKGLKGVV 34 (267)
T ss_dssp CEEEEECCGGGSSCCSCHH---HHHHHHHHTTCSEEE
T ss_pred CCccCcCcCCCCCCCCCHH---HHHHHHHHcCCCEEE
Confidence 4899999976634555555 458889999998775
No 115
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=67.70 E-value=51 Score=29.74 Aligned_cols=84 Identities=13% Similarity=-0.019 Sum_probs=45.1
Q ss_pred HHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeE-EEEcCChhhHHHHHHHHHHcCCCCcccccccCCc
Q 009282 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (538)
Q Consensus 187 ~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v-~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (538)
+.-+.+++.|.+.+.+..........+...+.++.+.++++|+.+ .+|+...-. .+.
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~----------------------~~~ 80 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFN----------------------QLT 80 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTT----------------------SCC
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccC----------------------CcH
Confidence 333334477888887764322212223345666666777888877 666521100 001
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
....+.+.+.++++..+|.+.+..|..
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 81 EEVVKKTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEccC
Confidence 112245667777777777776666543
No 116
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=66.73 E-value=89 Score=30.13 Aligned_cols=22 Identities=5% Similarity=0.015 Sum_probs=16.8
Q ss_pred CCCHHH-----HHHHHhHhHHHHcCCC
Q 009282 409 QISVTD-----YVRLTSTECARIFNVY 430 (538)
Q Consensus 409 ~ls~~e-----al~~aT~~~A~~lg~~ 430 (538)
+++.++ .-+....|+++++|++
T Consensus 345 ~ls~~~~~~~~~~~I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 345 PFVDLAQKKAWINAICWQTSAKLYHQE 371 (376)
T ss_dssp SSCCHHHHHHHHHHHHTHHHHHHTTCG
T ss_pred CcchhhcCHHHHHHHHHHhHHHHhCCC
Confidence 477666 6677788999999983
No 117
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=65.21 E-value=63 Score=30.09 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHcCCcEEEEEeee--CCCccCC-HHHHHHHH---HHHHh-cCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGF---KRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~---~~A~~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
..+..+++. +.|++.+.+.... +|....+ .+++++++ +..++ .+.++.+.......++..++. |..-.
T Consensus 65 a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~a----Ga~iI 139 (297)
T 1tx2_A 65 AVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEA----GAHII 139 (297)
T ss_dssp HHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHH----TCCEE
T ss_pred HHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHc----CCCEE
Confidence 444555566 7899999886533 3333333 67776665 55444 499999999887655555543 54321
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC------------HHHHHHHHHHHHcCCc---EEEecc
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------MDAMEEIAKARKAGQR---VIGEPV 315 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~------------~~~~~~i~~~~~~g~~---v~~~~~ 315 (538)
..-. .. ....+++.++.+.+..+++.|... ..-.+.++.+.+.|+. ++.+|.
T Consensus 140 Ndvs-g~------~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg 206 (297)
T 1tx2_A 140 NDIW-GA------KAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPG 206 (297)
T ss_dssp EETT-TT------SSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred EECC-CC------CCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCC
Confidence 1000 00 001255667788899999999631 1112456667788886 776664
No 118
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=64.79 E-value=80 Score=28.42 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=69.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCC---CccCCHHHHHHHHHHHHhcCC-eEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~A~~~g~-~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
..+.-+.+.+.|.+.+.++...+. ....+.+.+.++.+.++++|+ .+.+|....-. +. .
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~------------l~----s- 78 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVN------------LG----A- 78 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCC------------TT----C-
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccC------------CC----C-
Confidence 344444444789999988654322 123457788889999999999 99999842100 00 0
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH------HHHHHHHHHH--HcCCcEEEecc
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------DAMEEIAKAR--KAGQRVIGEPV 315 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~------~~~~~i~~~~--~~g~~v~~~~~ 315 (538)
.........+.+.+.++++..+|.+....|.... ..+..+...+ +.|+.+..++.
T Consensus 79 ~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 79 EGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 0001122346688899999999999988886541 1122222233 46777776655
No 119
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=63.12 E-value=35 Score=31.52 Aligned_cols=121 Identities=14% Similarity=0.059 Sum_probs=67.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeee--CCC-ccCCHHHHHHHHHHHHh---cCCeEEEEcCChhhHHHHHHHHHHcCCCCc
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAY--KGS-FMINDELLIEGFKRCKS---LGALAMVHAENGDAVFEGQKRMIELGITGP 256 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~--~~~-~~~~~~~l~~~~~~A~~---~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~ 256 (538)
..++..+++. +.|++.+.+.... +|. +....+++++++...+. .+.++.++......++..+ +.|..-.
T Consensus 30 ~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl----~aGa~iI 104 (280)
T 1eye_A 30 DAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAAL----QNGAQMV 104 (280)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH----HTTCCEE
T ss_pred HHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHH----HcCCCEE
Confidence 4555666666 7899999886432 222 22235666666554443 3999999998886555444 4464321
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC--------------------HHHHHHHHHHHHcCCc---EEEe
Q 009282 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS--------------------MDAMEEIAKARKAGQR---VIGE 313 (538)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~--------------------~~~~~~i~~~~~~g~~---v~~~ 313 (538)
..-+ .. ....+++.++.+.+.++++.|... ..-.+.++.+.+.|+. ++.+
T Consensus 105 Ndvs-g~------~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilD 177 (280)
T 1eye_A 105 NDVS-GG------RADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLD 177 (280)
T ss_dssp EETT-TT------SSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EECC-CC------CCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEE
Confidence 1000 00 001245667788899999999631 0011455666778886 7777
Q ss_pred cc
Q 009282 314 PV 315 (538)
Q Consensus 314 ~~ 315 (538)
|.
T Consensus 178 Pg 179 (280)
T 1eye_A 178 PG 179 (280)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 120
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=63.09 E-value=43 Score=29.99 Aligned_cols=137 Identities=15% Similarity=0.027 Sum_probs=81.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHH-hcccceeeeeeeeeecCChhhHHHHHHHHHHcCCc
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 198 (538)
...+.+++......+..+|+-+++-.... . ...+..... .-+.....+|..+ ....+....+.++.. +.|++
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~p~~----v-~a~~~l~~~~~v~v~tvigFP~G-~~~~~~k~~e~~~Av-~~GAd 103 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLTPVY----T-VKISGLAEKLGVKLCSVIGFPLG-QAPLEVKLVEAQTVL-EAGAT 103 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECHHH----H-HHHHHHHHHHTCCEEEEESTTTC-CSCHHHHHHHHHHHH-HHTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEchHH----h-eeehHhCCCCCceEEEEeCCCCC-CCcHHHHHHHHHHHH-HcCCC
Confidence 45688899999999999999999843211 2 222222221 1111111122111 122344566777777 78999
Q ss_pred EEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHH
Q 009282 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (538)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~ 278 (538)
.+.+.++.......-.+++.++.++++++|+++-+=.+.... ..+.+..+.++
T Consensus 104 EID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------------------------~~e~i~~a~ri 156 (234)
T 1n7k_A 104 ELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAPLW---------------------------DDKTLSLLVDS 156 (234)
T ss_dssp EEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------------------------CHHHHHHHHHH
T ss_pred EEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------------------------CHHHHHHHHHH
Confidence 998876653222233566777788888888877544454311 12557888888
Q ss_pred HHHcCCCEEEEe
Q 009282 279 AEFVNTPLYVVH 290 (538)
Q Consensus 279 ~~~~~~~~~~~h 290 (538)
+.+.|..++=+-
T Consensus 157 a~eaGADfVKTs 168 (234)
T 1n7k_A 157 SRRAGADIVKTS 168 (234)
T ss_dssp HHHTTCSEEESC
T ss_pred HHHhCCCEEEeC
Confidence 889998876544
No 121
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=61.75 E-value=53 Score=30.35 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=70.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeee--CCCccCC-HHHHHHHHHHHHh----cCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGFKRCKS----LGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~~~A~~----~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
...+..+++. +.|++.+.+.... +|....+ .++++++....+. .+.++.++......++..+ +.|..-
T Consensus 39 ~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl----~aGa~i 113 (282)
T 1aj0_A 39 DAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESA----KVGAHI 113 (282)
T ss_dssp HHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH----HTTCCE
T ss_pred HHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHH----HcCCCE
Confidence 3455556666 7899999886532 2322222 5666665544432 3999999998886555444 345432
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC-------------------HHHHHHHHHHHHcCCc---EEEe
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-------------------MDAMEEIAKARKAGQR---VIGE 313 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~-------------------~~~~~~i~~~~~~g~~---v~~~ 313 (538)
...-+ . ....+++.++.+.+.++++.|... ..-.+.++.+.+.|+. ++.+
T Consensus 114 INdvs-g-------~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilD 185 (282)
T 1aj0_A 114 INDIR-S-------LSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLD 185 (282)
T ss_dssp EEETT-T-------TCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEECC-C-------CCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEe
Confidence 11000 0 012345667788899999999631 1112455666778886 7766
Q ss_pred cc
Q 009282 314 PV 315 (538)
Q Consensus 314 ~~ 315 (538)
|.
T Consensus 186 Pg 187 (282)
T 1aj0_A 186 PG 187 (282)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 122
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=61.32 E-value=48 Score=31.88 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=37.4
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
|+ .++||||.-.. ..|.|+.. ...++.+...+.+.| +|.+|+=+.+-.|.-+.|..
T Consensus 297 G~dhVgiGsDfdG~-------------~~p~gl~d-~s~~p~L~~~L~~rG-~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 297 GEDHVGMGSDFDGA-------------TIPQGIAD-VTGLPALQAAMRAHG-YDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp CTTSEEECCCBTTS-------------CCCTTTCS-GGGHHHHHHHHHHHT-CCHHHHHHHHTHHHHHHHHH
T ss_pred CCCeEEECCCCCCC-------------CCCCCCCC-HHHHHHHHHHHHHCC-CCHHHHHHHHhHhHHHHHHH
Confidence 65 68999996422 12333333 234566665666665 99999999999998888764
No 123
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=58.57 E-value=23 Score=34.57 Aligned_cols=57 Identities=19% Similarity=0.311 Sum_probs=35.6
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
|+ .+.||||.-. ....|.|+.. ...++.+...+.+.| +|.+++=+.+--|.-+.|..
T Consensus 311 G~dhVgiGsDfDG------------~~~~P~gl~d-vs~~p~L~~~L~~rG-~se~di~ki~g~N~lRvl~~ 368 (400)
T 3id7_A 311 GVDHLGIGGDYDG------------TPFTPDGLGD-VSGYPNLIAELLDRG-WSQSDLAKLTWKNAVRVLDA 368 (400)
T ss_dssp CGGGEEECCCBTT------------CSCCCBTCSS-TTCHHHHHHHHHHTT-CCHHHHHHHHTHHHHHHHHH
T ss_pred CCceEEECCCCCC------------CCCCCCCCCC-HHHHHHHHHHHhhcC-CCHHHHHHHHHHhHHHHHHH
Confidence 65 6899999642 2223334333 224555555565655 99999888888887776653
No 124
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=55.57 E-value=56 Score=30.78 Aligned_cols=105 Identities=9% Similarity=0.037 Sum_probs=57.9
Q ss_pred ccCHHHHHHHHHHHHcCCcEEEeccccccccCcccccCCCcccccceeecCCCCCccc-HHHHHHHHhc-CC-ceEEeCC
Q 009282 291 VMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGH-NKALQAALAT-GI-LQLVGTD 367 (538)
Q Consensus 291 ~~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~-~~~l~~~l~~-Gv-~~~lgtD 367 (538)
-.+.++ ++++.++++|--|-.+..+..+. +. +....++ ..-+.-+.+. |+ .++||||
T Consensus 204 ~RNl~D-~~l~ala~~GGvigv~~~~~fl~--~~-----------------~~~tl~~~~~Hi~hi~~l~G~dhVgiGsD 263 (318)
T 3neh_A 204 PRNLDD-EQIKAMIEHDAMIHVVFYPLFTT--NN-----------------GVADTEDVIRHIDHICELGGLKNIGFGSD 263 (318)
T ss_dssp TTSBCH-HHHHHHHHTTCEEEECCCHHHHC--TT-----------------SCCBHHHHHHHHHHHHHTTCGGGEEECCC
T ss_pred CCCCCH-HHHHHHHHcCCEEEEEeeHHhhC--CC-----------------CCCCHHHHHHHHHHHHHhcCCCeEEECCC
Confidence 334455 89999999987665555442221 00 0000001 1112222222 54 5899999
Q ss_pred CCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCCC
Q 009282 368 HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY 430 (538)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~~ 430 (538)
.-. ....|.|+.. ...++.+...+.+ |+|.+++=+.+--|--+.+.-+
T Consensus 264 fDG------------~~~~p~gl~d-~s~~p~L~~~L~~--g~se~~i~ki~g~N~lRv~~~~ 311 (318)
T 3neh_A 264 FDG------------IPDHVKGLEH-VGKYQSFLETLEK--HYTKEEIEGFASRNFLNHLPKE 311 (318)
T ss_dssp BTS------------CSSCBBTBSS-GGGHHHHHHHHTT--TSCHHHHHHHHTHHHHHTCCC-
T ss_pred CCC------------CCCCCCCCCC-HHHHHHHHHHHHh--cCCHHHHHHHHhHhHHHHHhhh
Confidence 632 2223334333 2346666656666 5999999999888888887653
No 125
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=53.01 E-value=1.8e+02 Score=29.02 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=64.6
Q ss_pred HHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEEEEeee
Q 009282 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (538)
Q Consensus 128 ~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~ 206 (538)
......++.+|+..++-....++. .....++...+.+......+.+... ...+.+...++.+.+.+.|++.+.+- +.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~-~~~~~e~~~~~a~~l~~~Gad~I~l~-DT 180 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTS-PVHNLQTWVDVAQQLAELGVDSIALK-DM 180 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCC-TTCCHHHHHHHHHHHHHTTCSEEEEE-ET
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeC-CCCCHHHHHHHHHHHHHCCCCEEEEc-CC
Confidence 445677889999887744322222 3444444444443322212222221 12233444444333337899887653 32
Q ss_pred CCCccCCHHHHHHHHHHHH-hcCCeEEEEcCChhhH-HHHHHHHHHcCCC
Q 009282 207 KGSFMINDELLIEGFKRCK-SLGALAMVHAENGDAV-FEGQKRMIELGIT 254 (538)
Q Consensus 207 ~~~~~~~~~~l~~~~~~A~-~~g~~v~~H~~~~~~~-~~~~~~~~~~g~~ 254 (538)
.| ...+..+.+++...+ +.++++.+|+.+.... -...-...+.|..
T Consensus 181 ~G--~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~ 228 (464)
T 2nx9_A 181 AG--ILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVD 228 (464)
T ss_dssp TS--CCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCS
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCC
Confidence 22 346888888877664 3588999999665322 1222234456664
No 126
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=52.76 E-value=1.5e+02 Score=27.58 Aligned_cols=111 Identities=16% Similarity=0.095 Sum_probs=64.2
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc----CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCc
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL----GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~----g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 265 (538)
+.|++++-+.-.......++.++-+++++.+.+. ..++.+++. +..+.-+..+.+.+.|.....--.+ ..|.
T Consensus 39 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 39 ENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 6788887543332334567788777777766543 589999984 3344445556677777765321111 1222
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
...-++....++...+.++++.+..... ..+.+.++++.
T Consensus 119 --~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 119 --QQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp --HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 2233445555677778999988864211 12566666654
No 127
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=50.13 E-value=82 Score=29.73 Aligned_cols=32 Identities=9% Similarity=0.238 Sum_probs=24.2
Q ss_pred hHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 396 RMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 396 ~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
.++.+...+.+.| +|.+++=+.+-.|..+.++
T Consensus 289 ~~~~l~~~L~~~G-~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 289 EFPNLTETLLKRG-MPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp GTHHHHHHHHHTT-CCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHH
Confidence 4555555555555 9999999999999988774
No 128
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=49.19 E-value=1.7e+02 Score=27.25 Aligned_cols=112 Identities=4% Similarity=-0.147 Sum_probs=62.6
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHH---HHHHHHHHhcccceeeeeeeeee-cCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ...+ .++...+... ..+. ...+.. ....+..+..+...
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-gr~p--viaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-KNRL--LLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-TTSE--EEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-CCCc--EEEecCCCCHHHHHHHHHHHH
Confidence 45667777777888899999998866543332 2222 2222222221 1111 111222 23344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++.+-+..-+...+..+.+.+.+.++. |...++++..+-
T Consensus 107 -~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 107 -QVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp -HTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 789999876543322222477777777654 667789999875
No 129
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=48.92 E-value=19 Score=31.93 Aligned_cols=133 Identities=11% Similarity=0.009 Sum_probs=75.9
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee---cCChhhHHHHHHHHHHcC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 196 (538)
...+.+++......+..+|+-+++-. +.. .....+. .....+......+++ ...+....+.++.. +.|
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~--p~~--v~~~~~~----l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai-~~G 84 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP--PSY--VAWVRAR----YPHAPFRLVTVVGFPLGYQEKEVKALEAALAC-ARG 84 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC--GGG--HHHHHHH----CTTCSSEEEEEESTTTCCSCHHHHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC--HHH--HHHHHHH----hCCCCceEEEEecCCCCCCchHHHHHHHHHHH-HcC
Confidence 45688899999999999999999843 211 1111111 111112222111221 12234556777777 789
Q ss_pred CcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHH
Q 009282 197 INSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (538)
Q Consensus 197 ~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i 272 (538)
++.+.+.++.. +.+..-.+++.++.+++++..+++.. +.... ..+.+
T Consensus 85 Adevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIl--et~~l---------------------------~~e~i 135 (220)
T 1ub3_A 85 ADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVIL--ETGYF---------------------------SPEEI 135 (220)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEEC--CGGGS---------------------------CHHHH
T ss_pred CCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEE--ecCCC---------------------------CHHHH
Confidence 99998877643 22222355666677777655555443 22210 12557
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 009282 273 TRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 273 ~~~l~~~~~~~~~~~~~h 290 (538)
..+.+++.+.|..++=+-
T Consensus 136 ~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 136 ARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHhCCCEEEeC
Confidence 788888888888876544
No 130
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=48.86 E-value=1.5e+02 Score=26.75 Aligned_cols=92 Identities=10% Similarity=0.060 Sum_probs=55.0
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh--hhHHHHHHHHHHcCCCCcccccccCCchHHHH
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG--DAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (538)
++.|.+.+-+..... ...+.+.+.++.+.++++|+.+..+.... .........-...+... ........+
T Consensus 31 ~~~G~~~vEl~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~r~~~~~ 102 (290)
T 3tva_A 31 QDLKVPTVQVHAPHP--HTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVP------LETRASRVA 102 (290)
T ss_dssp HHTTCSEEEEECCCG--GGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCS------TTTHHHHHH
T ss_pred HHcCCCEEEecCCCC--CcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCC------HHHHHHHHH
Confidence 378999998875432 23567888999999999999998885310 00000000000001100 011223456
Q ss_pred HHHHHHHHHHHcCCCEEEEecc
Q 009282 271 ATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
.+.+.++++..+|.+.+..|..
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~G 124 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHIG 124 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCC
Confidence 7888899999999998888754
No 131
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=47.32 E-value=1.4e+02 Score=27.74 Aligned_cols=110 Identities=13% Similarity=-0.010 Sum_probs=61.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---g~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---GTNSTEKTLKLVKQAE 104 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---CCccHHHHHHHHHHHH
Confidence 34556666677777899999998865433322 22 223333333322 22222221 1222344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 105 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 105 -KLGANGVLVVTPYY--NKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp -HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999987654332 33477888777754 666789998875
No 132
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=46.94 E-value=1.7e+02 Score=26.74 Aligned_cols=88 Identities=17% Similarity=0.111 Sum_probs=55.9
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCc---cCCHHHHHHHHHHHHhcCC-eEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGA-LAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~A~~~g~-~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
..+.-+.+++.|.+.+-++...+..+ ..+.+.+.++.+.++++|+ .+.+|....-. +
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~n------------l------- 80 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIIN------------I------- 80 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCC------------T-------
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEecccccc------------C-------
Confidence 33443444488999999865443221 2335677778888889999 79999742100 0
Q ss_pred ccCCc-----hHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 261 LSRPP-----LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 261 ~~~~~-----~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
..+. ....+.+.+.++++..+|.+.+..|..
T Consensus 81 -~s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g 116 (303)
T 3aal_A 81 -GNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPG 116 (303)
T ss_dssp -TCSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCE
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 0110 122466778899999999998887754
No 133
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=46.64 E-value=1.8e+02 Score=28.45 Aligned_cols=56 Identities=18% Similarity=0.195 Sum_probs=36.3
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
|+ .+.||||.-.... +.|+.. ...++.+...+.+.| +|.+++=+.+--|.-+.|..
T Consensus 350 G~dhVGiGsDfDG~~~-------------~~gl~d-vs~~p~l~~~L~~rG-~se~di~ki~ggN~lRVl~~ 406 (417)
T 3b40_A 350 GIDHVGISSDFNDGGG-------------VDGWKD-VSEIRNVTAELITRG-YSDADIAKLWGGNFLRAWGE 406 (417)
T ss_dssp CGGGEEEECCBTTTCC-------------BBTBCS-GGGHHHHHHHHHHHT-CCHHHHHHHTTHHHHHHHHH
T ss_pred CCCeEEEcCCCCCCCC-------------CCCCCC-HHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Confidence 54 6899999642210 112222 234566665666666 99999999998898887753
No 134
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=46.61 E-value=26 Score=30.83 Aligned_cols=57 Identities=5% Similarity=-0.132 Sum_probs=37.6
Q ss_pred HHHHHhcCCceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcCC
Q 009282 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNV 429 (538)
Q Consensus 352 l~~~l~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg~ 429 (538)
+....+.|+++.++||..... . +. ...... .+...-|++.++++.+.|.+|.+++..
T Consensus 153 l~l~k~~g~~ivisSDAh~~~-~---------------v~----~~~~~~-~l~~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 153 WKLVEKYKVRRFLTSSAQEKW-D---------------VR----YPRDLI-SLGVVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp HHHHHHHTCCEEEECCCSSGG-G---------------CC----CHHHHH-HHHHHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred HHHHHhcCCCEEEeCCCCChh-h---------------cC----CHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 344566699999999954221 1 10 122222 344455699999999999999998764
No 135
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=46.60 E-value=1e+02 Score=28.09 Aligned_cols=122 Identities=16% Similarity=0.100 Sum_probs=74.1
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
..+..+++. +.|++.+.+.... ......+++++++...++. +.++.+-......++..++.+ .|..-.- ..
T Consensus 27 a~~~a~~~v-~~GAdiIDIg~g~--~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~--~Ga~iIN---dv 98 (262)
T 1f6y_A 27 VQEWARRQE-EGGARALDLNVGP--AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKC--KNRAMIN---ST 98 (262)
T ss_dssp HHHHHHHHH-HHTCSEEEEBCC------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHC--SSCEEEE---EE
T ss_pred HHHHHHHHH-HCCCcEEEECCCC--CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhC--CCCCEEE---EC
Confidence 445555666 7899988775421 1223477888888777665 889999888776555555432 1432110 00
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEeccC---H---H-----HHHHHHHHHHcCCc---EEEeccc
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS---M---D-----AMEEIAKARKAGQR---VIGEPVV 316 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~---~---~-----~~~~i~~~~~~g~~---v~~~~~~ 316 (538)
.- ..+...+++.++.+.+.++++.|... + . ..+.++.+.+.|+. ++.+|..
T Consensus 99 s~---~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~ 163 (262)
T 1f6y_A 99 NA---EREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLI 163 (262)
T ss_dssp CS---CHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred CC---CcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCC
Confidence 00 12455677888889999999999721 0 0 12556667788885 7777664
No 136
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=46.60 E-value=1.8e+02 Score=26.95 Aligned_cols=110 Identities=9% Similarity=-0.090 Sum_probs=63.5
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+...
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---GTYDTAHSIRLAKACA 107 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHH
Confidence 45667777777888899999998866544332 222 2333333332 222222221 1223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 108 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 108 -AEGAHGLLVVTPYY--SKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp -HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred -HcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 23477777777754 566799999885
No 137
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=46.51 E-value=1.8e+02 Score=26.94 Aligned_cols=111 Identities=14% Similarity=0.063 Sum_probs=62.4
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ .+.++.+++. +..+.-+..+.+.+.|..+..--.+ ..|
T Consensus 47 ~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-- 124 (304)
T 3l21_A 47 DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKP-- 124 (304)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC--
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC--
Confidence 678888754333333456677777777776544 2578888883 3344445555667777754321111 122
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
....-++....++...+.++++.+..... ..+.+.++++.
T Consensus 125 s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 168 (304)
T 3l21_A 125 PQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASH 168 (304)
T ss_dssp CHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC
Confidence 22233344445566678899888853211 12566666643
No 138
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=46.08 E-value=1.3e+02 Score=27.77 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=79.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCC-ccCCHHHHHHHH-HHHH--hcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGS-FMINDELLIEGF-KRCK--SLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~-~~~~~~~l~~~~-~~A~--~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
.+-+..+.+-+.+++.+...|--+ +.... +....+.+..++ ..|+ +++.||..|....... +.+..+++.|.++
T Consensus 29 ~n~e~~~avi~AAee~~sPvIlq~-s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~-e~i~~ai~~GFtS 106 (288)
T 3q94_A 29 NNLEWTQAILAAAEEEKSPVILGV-SEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSF-EKCKEAIDAGFTS 106 (288)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEE-EHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSH-HHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-ChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCH-HHHHHHHHcCCCe
Confidence 344556666665555565554322 21111 112455565555 4566 7899999999555433 4455667789887
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEE--ecc------------CHHHHHHHHHHHHcCCcEEE
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV--HVM------------SMDAMEEIAKARKAGQRVIG 312 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~--h~~------------~~~~~~~i~~~~~~g~~v~~ 312 (538)
........|.....+...+.+++++..|..+-.. +.. ..++.+..+..++.|+...+
T Consensus 107 VMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LA 177 (288)
T 3q94_A 107 VMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLA 177 (288)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEE
Confidence 7666666788888888899999999888766432 221 12222455555678876543
No 139
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=45.90 E-value=1.7e+02 Score=26.71 Aligned_cols=124 Identities=15% Similarity=0.063 Sum_probs=74.5
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc-CCeEEEEcCChhhHHHHHHHHHHcCCCCccccc
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~-g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (538)
+...+..+++. +.|++.+.+..... ..-..+.+..+++..++. +.++.+.......++..++.+ .|..-.-
T Consensus 34 ~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~--~Ga~iIN--- 105 (271)
T 2yci_X 34 RPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVH--RGHAMIN--- 105 (271)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHC--CSCCEEE---
T ss_pred HHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhC--CCCCEEE---
Confidence 34455566666 78999998754431 111355666666666554 999999988776555555442 1432110
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEeccC------H-----HHHHHHHHHHHcCCc---EEEeccc
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQR---VIGEPVV 316 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~------~-----~~~~~i~~~~~~g~~---v~~~~~~ 316 (538)
...- ..+...+.+.++...+..+++.|... . ...+.++.+.+.|+. ++.+|..
T Consensus 106 dvs~---~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~ 172 (271)
T 2yci_X 106 STSA---DQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLI 172 (271)
T ss_dssp EECS---CHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCC
T ss_pred ECCC---CccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCC
Confidence 0001 11335677888888999999999731 1 112455667778886 7777664
No 140
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=44.95 E-value=1.1e+02 Score=27.76 Aligned_cols=136 Identities=15% Similarity=0.057 Sum_probs=75.9
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
+..+.+++......+..+|+-+++-. |.. .....+.+....-....-.+|..+. ...+....+.+... +.|++.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~--p~~--V~~a~~~L~gs~v~v~tVigFP~G~-~~~~~Kv~Ea~~Ai-~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN--PCY--VKLAREELEGTDVKVVTVVGFPLGA-NETRTKAHEAIFAV-ESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC--GGG--HHHHHHHHTTSCCEEEEEESTTTCC-SCHHHHHHHHHHHH-HHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC--HHH--HHHHHHHhcCCCCeEEEEecCCCCC-CcHHHHHHHHHHHH-HcCCCE
Confidence 45688889888999999999999843 211 2222222211111111112222211 12244556666666 789999
Q ss_pred EEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 200 FKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 200 ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
+.+.++.. |.+..-.+++.++.+++. +.++-+=.+.... +.+.+.++
T Consensus 128 IDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~L---------------------------t~eei~~A 178 (260)
T 3r12_A 128 IDMVINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIETCYL---------------------------DTEEKIAA 178 (260)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCGGGC---------------------------CHHHHHHH
T ss_pred EEEEeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeCCCC---------------------------CHHHHHHH
Confidence 98877642 222223455666666654 5555544454311 12557778
Q ss_pred HHHHHHcCCCEEEEe
Q 009282 276 IRLAEFVNTPLYVVH 290 (538)
Q Consensus 276 l~~~~~~~~~~~~~h 290 (538)
.+++.+.|..++=+-
T Consensus 179 ~~ia~eaGADfVKTS 193 (260)
T 3r12_A 179 CVISKLAGAHFVKTS 193 (260)
T ss_dssp HHHHHHTTCSEEECC
T ss_pred HHHHHHhCcCEEEcC
Confidence 888888888876543
No 141
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=44.84 E-value=1.9e+02 Score=26.59 Aligned_cols=110 Identities=11% Similarity=0.016 Sum_probs=62.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+... +..+-.|. ......+..+..+..
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a- 91 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---GSNCTEEAIELSVFA- 91 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSSHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHH-
Confidence 44566677777888899999998866543332 222 22333333222 22222221 122234444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
++.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 92 EDVGADAVLSITPYY--NKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp HHHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HhcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 378999987654332 23477788777754 667789999875
No 142
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=44.81 E-value=1.6e+02 Score=27.18 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCcEEEEEee-----eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (538)
.++..+..++.|++.+.+... |++.+.++.+.|+++-+.. +++++.|-...-. .+.++.+...|+
T Consensus 161 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vpLVlHGgSG~~-~e~i~~ai~~Gv 230 (288)
T 3q94_A 161 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVPLVLHGGTGIP-TADIEKAISLGT 230 (288)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSCEEECCCTTCC-HHHHHHHHHTTE
T ss_pred HHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCCEEEeCCCCCC-HHHHHHHHHcCC
Confidence 456666666789998876554 3444667788887776544 7999999754322 233444445554
No 143
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=44.59 E-value=1.4e+02 Score=27.55 Aligned_cols=104 Identities=11% Similarity=-0.038 Sum_probs=56.8
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee---cCChhhHHHHHHHHHHcC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 196 (538)
...+.+++......+..+|+-+++-. +.. .....+.+ ....+.++.-.+++ ...+....+.+... +.|
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~--P~~--V~~a~~~L----~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai-~~G 139 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR--PDY--VSRAVQYL----QGTQVGVTCVIGFHEGTYSTDQKVSEAKRAM-QNG 139 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC--GGG--HHHHHHHT----TTSSCEEEEEESTTTSCSCHHHHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC--HHH--HHHHHHHc----CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHH-HcC
Confidence 45688889888999999999999843 211 22222211 11112222111121 22244566677777 789
Q ss_pred CcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEE
Q 009282 197 INSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAM 232 (538)
Q Consensus 197 ~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~ 232 (538)
++.+.+.++.. +.+..-.+++.++.+++....+++.
T Consensus 140 AdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVI 179 (288)
T 3oa3_A 140 ASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVI 179 (288)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEE
Confidence 99998776642 2222234555666666654333443
No 144
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=44.50 E-value=1.7e+02 Score=27.27 Aligned_cols=112 Identities=9% Similarity=0.010 Sum_probs=64.1
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.+. ......+..+..+..
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A- 99 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---SHYSTQVCAARSLRA- 99 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---CCchHHHHHHHHHHH-
Confidence 45667777777888899999988866543332 22 23333333332 222232221 122334444444444
Q ss_pred HHcCCcEEEEEeeeCCC-ccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGS-FMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~-~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
++.|++++-+..-|.+. ...+.+.+.+.++ .|...++++..+-
T Consensus 100 ~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp HHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 37899998765433221 2457788877765 4667799998875
No 145
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=44.20 E-value=2e+02 Score=29.55 Aligned_cols=122 Identities=16% Similarity=0.055 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh-cCCeEEEEcCChhhHHHHHHHHHHcCCCCccccccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (538)
..+..+++. +.|++.+.+-.+ .......+++++++...++ .+.++.+.......++..++.+ .|..-.-.
T Consensus 342 a~~~A~~~v-~~GAdiIDIgpg--~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~--~G~~iINd---- 412 (566)
T 1q7z_A 342 VIKEAKTQV-EKGAEVLDVNFG--IESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAY--PGRSLFNS---- 412 (566)
T ss_dssp HHHHHHHHH-HTTCSEEEEECS--SGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHC--SSCCEEEE----
T ss_pred HHHHHHHHH-HCCCCEEEECCC--CCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhc--CCCCEEEE----
Confidence 445555566 789999988632 1233458888888877654 4899999998876666555443 14321100
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEeccC----------HHHHHHHHHHHHcCCc--EEEeccc
Q 009282 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQR--VIGEPVV 316 (538)
Q Consensus 263 ~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~----------~~~~~~i~~~~~~g~~--v~~~~~~ 316 (538)
.....+.+.+.+.++...+..+++.|... ....+.++.+.+.|++ ++.+|..
T Consensus 413 --is~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~ 476 (566)
T 1q7z_A 413 --AKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPGV 476 (566)
T ss_dssp --EESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCC
T ss_pred --CCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCCC
Confidence 00111445677888889999999999763 1112456667788885 7777664
No 146
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=43.44 E-value=1.4e+02 Score=26.98 Aligned_cols=85 Identities=18% Similarity=0.099 Sum_probs=53.1
Q ss_pred HHHcCCcEEEEEeeeCCC---ccCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCcccccccCCc
Q 009282 192 VKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (538)
+++.|.+.+-++...+.. ...+.+.+.++.+.++++|+. +.+|....-. +..+ .....
T Consensus 21 ~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~------------~~~~----~~~~r 84 (287)
T 2x7v_A 21 TVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLIN------------LASP----KDDIW 84 (287)
T ss_dssp HHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCC------------TTCS----SHHHH
T ss_pred HHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccc------------cCCC----CHHHH
Confidence 337899999886543221 234567888888999999998 7888642100 0000 00000
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
....+.+.+.++++..+|.+.+..|..
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~~g 111 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIHPG 111 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 122356788899999999988877754
No 147
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=43.36 E-value=1.2e+02 Score=28.24 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=67.4
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh--cCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~--~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
+-+....+-+.+++.+...|--. +.........+.+..++..+.+ .+.||..|....... +.+..+++.|.++...
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~-e~~~~ai~~GFtSVMi 103 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQA-SEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTF-ESCEKAVKAGFTSVMI 103 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEE-EHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSH-HHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc-ChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCH-HHHHHHHHhCCCcEEE
Confidence 44555555555545555544222 1111111245667777766654 689999999554433 4555667889887766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
.....|.....+...+.+++++..|..+-.
T Consensus 104 DgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 133 (307)
T 3n9r_A 104 DASHHAFEENLELTSKVVKMAHNAGVSVEA 133 (307)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 666678888888889999999988876643
No 148
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=42.33 E-value=2.2e+02 Score=27.01 Aligned_cols=110 Identities=10% Similarity=-0.041 Sum_probs=62.8
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.+. ......+.++..+...
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~ 123 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---GGTNARETIELSQHAQ 123 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CSSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHH
Confidence 45667777777888899999988766543332 22 233333333322 22222221 1122344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 124 -~~Gadavlv~~P~Y--~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 124 -QAGADGIVVINPYY--WKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp -HHTCSEEEEECCSS--SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 23477888777754 667789999875
No 149
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=42.28 E-value=2.1e+02 Score=26.45 Aligned_cols=110 Identities=15% Similarity=0.029 Sum_probs=62.5
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.|. ......+..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---GSNNTHASIDLTKKAT 104 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---CCCCHHHHHHHHHHHH
Confidence 44566677777788899999998866543332 22 22333333332 222222221 1222344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 105 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 105 -EVGVDAVMLVAPYY--NKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred -hcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 23477777777754 667789998875
No 150
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.64 E-value=2.1e+02 Score=26.30 Aligned_cols=110 Identities=13% Similarity=0.006 Sum_probs=62.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---GGNATHEAVHLTAHAK 92 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHH
Confidence 44566677777788899999998866543332 22 223333333322 22222221 1222344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 93 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 93 -EVGADGALVVVPYY--NKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 33477788777754 667789998875
No 151
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=41.41 E-value=2.2e+02 Score=27.04 Aligned_cols=125 Identities=14% Similarity=0.080 Sum_probs=70.4
Q ss_pred ChhhHHHHHHHHHHcCCcEEEEEee-------e-CCCc----------------cCCHHHHHHHHHHHHhcCCeEEEEcC
Q 009282 181 DEVVSDEMEVMVKEKGINSFKFFMA-------Y-KGSF----------------MINDELLIEGFKRCKSLGALAMVHAE 236 (538)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~~ik~~~~-------~-~~~~----------------~~~~~~l~~~~~~A~~~g~~v~~H~~ 236 (538)
+.+...++.+.+++.|++.+|+-.- + ...+ .++.+.++.+.+.+++.|+.+..-+.
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~ 112 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLF 112 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeC
Confidence 4455556666666789998886421 1 1001 25789999999999999999999888
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEe-ccCHHHHH-HHHHHHHcCCcEEEec
Q 009282 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH-VMSMDAME-EIAKARKAGQRVIGEP 314 (538)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h-~~~~~~~~-~i~~~~~~g~~v~~~~ 314 (538)
+...++. +..+++....--+.. ..=-.+++.....+.++++.- .++..++. .++.+...|..++.+-
T Consensus 113 d~~svd~----l~~~~v~~~KI~S~~-------~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlh 181 (349)
T 2wqp_A 113 SRAAALR----LQRMDIPAYKIGSGE-------CNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLH 181 (349)
T ss_dssp SHHHHHH----HHHHTCSCEEECGGG-------TTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHH----HHhcCCCEEEECccc-------ccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 7755433 334444322100000 001124555556788887744 33333322 2333455565666654
Q ss_pred cc
Q 009282 315 VV 316 (538)
Q Consensus 315 ~~ 316 (538)
|.
T Consensus 182 c~ 183 (349)
T 2wqp_A 182 CT 183 (349)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 152
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=41.14 E-value=1.2e+02 Score=27.35 Aligned_cols=88 Identities=13% Similarity=0.095 Sum_probs=55.4
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCC---ccCCHHHHHHHHHHHHhcCCe---EEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~A~~~g~~---v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
+.+.-+.+++.|.+.+.++...+.. ...+.+.+.++.+.++++|+. +.+|....-. +
T Consensus 14 l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~------------l----- 76 (285)
T 1qtw_A 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN------------L----- 76 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCC------------T-----
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccc------------c-----
Confidence 3333344448899999885432221 124567888888889999998 6777632100 0
Q ss_pred ccccCCc----hHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 259 HALSRPP----LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 259 ~~~~~~~----~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
..+. ....+.+.+.++++..+|.+.+..|..
T Consensus 77 ---~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 111 (285)
T 1qtw_A 77 ---GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 (285)
T ss_dssp ---TCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcC
Confidence 0010 122356788899999999998888764
No 153
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.00 E-value=2.2e+02 Score=26.27 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=63.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++. +..+.-+..+.+.+.|.....--.+ ..|.
T Consensus 39 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~- 117 (297)
T 3flu_A 39 ENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPS- 117 (297)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-
Confidence 678888755433333456788877777776543 3578888884 3344445556677777764321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-++....++...+.++.+.|..... ..+.+.++++
T Consensus 118 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 118 -QEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc
Confidence 2233444555677778999888863211 1256666653
No 154
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=40.84 E-value=14 Score=33.31 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=24.6
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
++|.|+|...+..+..+++ ...+.+.+.|++.+.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~---e~v~~A~~~Gl~~ia 36 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLS---DYIAQAKQKGIKLFA 36 (245)
T ss_dssp CEECCBCCTTSTTCCCCHH---HHHHHHHHHTCCEEE
T ss_pred ceEeCcCCCCCCCCCCcHH---HHHHHHHHCCCCEEE
Confidence 6899999977633333554 447888899998775
No 155
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=40.72 E-value=2.1e+02 Score=26.30 Aligned_cols=110 Identities=11% Similarity=-0.075 Sum_probs=61.6
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.|. ......+..+..+..
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~A- 91 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---GSNSTAEAIAFVRHA- 91 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCccHHHHHHHHHHH-
Confidence 34566667777788899999998866543322 22 22333333332 222222221 112223444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
++.|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 92 ~~~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 92 QNAGADGVLIVSPYY--NKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 378999986654332 3347777777764 4667789999875
No 156
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=39.85 E-value=1.3e+02 Score=28.05 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=66.6
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
.+-+..+.+-+.+++.+...+--. +.........+.+..++..+.+.++||..|....... +.+..+.+.|.++....
T Consensus 25 ~n~e~~~Ail~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~-e~~~~ai~~GFtSVMiD 102 (305)
T 1rvg_A 25 NNMEFLQAVLEAAEEQRSPVILAL-SEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSY-ESVLRALRAGFTSVMID 102 (305)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEE-EHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSH-HHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-ChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCH-HHHHHHHHcCCCeeeeC
Confidence 344556666665555565544222 1111111234556666655544999999999655433 45556678898877666
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 260 ALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 260 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
....|.+...+...+.+++++..|..+-
T Consensus 103 gS~~p~eENi~~Tk~vv~~ah~~gvsVE 130 (305)
T 1rvg_A 103 KSHEDFETNVRETRRVVEAAHAVGVTVE 130 (305)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 6667777788888899999998876654
No 157
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=39.57 E-value=2.3e+02 Score=26.03 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=30.5
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcC
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAG 307 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g 307 (538)
+.....+...+.++++.+.+.++ +.|+..+.. +.++.+++.+
T Consensus 108 ~~~~Q~~~F~~ql~lA~e~~lPv-~iH~r~a~~-~~l~il~~~~ 149 (287)
T 3rcm_A 108 PRPLQEKALEAQLTLAAQLRLPV-FLHERDASE-RLLAILKDYR 149 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCE-EEEEESCHH-HHHHHHHTTG
T ss_pred cHHHHHHHHHHHHHHHHHhCCCE-EEEcCCcHH-HHHHHHHHcC
Confidence 34455677889999999999887 567776554 7777776654
No 158
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=39.57 E-value=2e+02 Score=26.45 Aligned_cols=65 Identities=23% Similarity=0.283 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCcEEEEEee-----eCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (538)
.++..+..++.|++.+.+... |.+.+.++.+.|+++-+. .+++++.|-...-.. +.++.+...|+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~---~~vpLVlHGgSG~~~-e~i~~ai~~Gv 226 (286)
T 1gvf_A 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVPLVLHGASDVPD-EFVRRTIELGV 226 (286)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH---CCSCEEECCCTTCCH-HHHHHHHHTTE
T ss_pred HHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHh---cCCCEEEECCCCCCH-HHHHHHHHCCC
Confidence 456666676789998876554 234456778888776554 479999998544322 33444455554
No 159
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=39.48 E-value=2.1e+02 Score=25.67 Aligned_cols=112 Identities=12% Similarity=-0.013 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeC-CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYK-GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~-~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
..+.-+.+++.|.+++-++..+. .....+...+.++.+.++++|+.+..|...... .. ..
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-------------~~------~~ 77 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDI-------------SL------SA 77 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCC-------------ST------TS
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCC-------------CC------ch
Confidence 33444444478999988753210 011134577788888889999999888532100 00 00
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEEEeccCH--------------HHH-HHHHHHHHcCCcEEEecc
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSM--------------DAM-EEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~--------------~~~-~~i~~~~~~g~~v~~~~~ 315 (538)
......+.+.+.++.+..+|.+.+..|.... ..+ +..+.+++.|+.+..++.
T Consensus 78 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 144 (286)
T 3dx5_A 78 DFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETH 144 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecC
Confidence 1122346677888888999988877765431 011 222334567887776654
No 160
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=39.47 E-value=1e+02 Score=28.72 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHc--------CCCCcccccccCCchHHHHHHHHHHHHHHHcCCCE
Q 009282 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL--------GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (538)
Q Consensus 215 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 286 (538)
..+..+...|+++++||..|....... +.+..+++. |.++........|.....+...+.+++++..|..+
T Consensus 69 ~~~~~~~~~A~~~~VPVaLHlDHg~~~-e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsV 147 (306)
T 3pm6_A 69 LLVRTAASACRAASVPITLHLDHAQDP-EIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIAT 147 (306)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEEECCH-HHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCH-HHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344556677889999999999554333 334555566 77666555555677777788889999988777655
Q ss_pred E
Q 009282 287 Y 287 (538)
Q Consensus 287 ~ 287 (538)
-
T Consensus 148 E 148 (306)
T 3pm6_A 148 E 148 (306)
T ss_dssp E
T ss_pred E
Confidence 4
No 161
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.08 E-value=2.3e+02 Score=25.99 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=62.7
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++. +..+.-+..+.+.+.|.....--.+ ..|.
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~- 111 (291)
T 3tak_A 33 EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPT- 111 (291)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-
Confidence 678888744333233456677777777766543 3578888884 3344445556677777764321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-++....++...+.++++.|..... ..+.+.++++
T Consensus 112 -~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3tak_A 112 -QEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAE 153 (291)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHc
Confidence 2233444555667778999888863211 1256666663
No 162
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=38.89 E-value=2.3e+02 Score=25.99 Aligned_cols=111 Identities=10% Similarity=0.008 Sum_probs=63.7
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++. +..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 34 ~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~- 112 (292)
T 3daq_A 34 ENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTN- 112 (292)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-
Confidence 678888855433333456778777777766543 3578998883 3344445555667778764321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
+..-++....++...+.++++.|..... ..+.+.++++.
T Consensus 113 -~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 155 (292)
T 3daq_A 113 -QRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH 155 (292)
T ss_dssp -HHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 2233444445566668999988864211 12666667653
No 163
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=38.76 E-value=1.3e+02 Score=27.81 Aligned_cols=107 Identities=7% Similarity=-0.022 Sum_probs=66.9
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHH-HHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCccc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.+-+..+.+-+.+++.+...|-- .+.........+.+..++ ..|++++.||..|....... +.+..+++.|.++...
T Consensus 26 ~n~e~~~avl~AAe~~~sPvIlq-~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~~-e~i~~ai~~GFtSVMi 103 (286)
T 1gvf_A 26 HNAETIQAILEVCSEMRSPVILA-GTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESL-DDIRRKVHAGVRSAMI 103 (286)
T ss_dssp CSHHHHHHHHHHHHHHTCCCEEE-ECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCH-HHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-CChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCCH-HHHHHHHHcCCCeEEE
Confidence 34455555555554555554422 121111112344454444 56778999999999555433 4555667789887766
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 259 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
.....|.....+...+.+++++..|..+-.
T Consensus 104 DgS~lp~eeNi~~Tk~vv~~ah~~gvsVEa 133 (286)
T 1gvf_A 104 DGSHFPFAENVKLVKSVVDFCHSQDCSVEA 133 (286)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 666677777888888999999988766543
No 164
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.72 E-value=2.4e+02 Score=26.08 Aligned_cols=110 Identities=9% Similarity=-0.079 Sum_probs=61.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.+. ......+..+..+...
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---GCVSTAESQQLAASAK 103 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHH
Confidence 34566667777778899999998866543332 22 223333333322 22222221 1122344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcC-CeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLG-ALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g-~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...+ +++..+-
T Consensus 104 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 104 -RYGFDAVSAVTPFY--YPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp -HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -hCCCCEEEecCCCC--CCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 78999987654332 23477788777754 56667 9998875
No 165
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=38.64 E-value=2e+02 Score=26.62 Aligned_cols=110 Identities=10% Similarity=-0.027 Sum_probs=61.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---GSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---CCCCHHHHHHHHHHHH
Confidence 34556667777788899999998866543322 22 223333333322 22222221 1222344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+ ....+.+.+.+.++. |...++++..+-
T Consensus 93 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 93 -QAGADAVLCVAGY--YNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp -HHTCSEEEECCCT--TTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899998765433 233477788777754 667789998875
No 166
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=38.11 E-value=2.4e+02 Score=26.01 Aligned_cols=53 Identities=8% Similarity=-0.135 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc--CCeEEEEcCCh
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENG 238 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~~~~ 238 (538)
+...++.+.+.+.|++.+.+. +-.|. ..+....++++..++. +.++..|.++.
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~ 213 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDT 213 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCT
T ss_pred HHHHHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 334444333337899988765 55554 5788888888877653 57899999654
No 167
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=38.07 E-value=2.5e+02 Score=26.13 Aligned_cols=111 Identities=12% Similarity=0.068 Sum_probs=61.4
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-+++++.+.+ ...++.+++. +..+.-+..+.+.+.|.....--.+ ..|
T Consensus 56 ~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-- 133 (315)
T 3na8_A 56 DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKL-- 133 (315)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCC--
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC--
Confidence 678887754333333456677777777766543 2577888874 3344445555666777654321111 122
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHH-HHc
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKA-RKA 306 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~-~~~ 306 (538)
....-++....++...+.++++.+..... ..+.+.++ ++.
T Consensus 134 s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~ 178 (315)
T 3na8_A 134 NEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREV 178 (315)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcC
Confidence 22233444455667778899988864211 12666666 544
No 168
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=37.57 E-value=2.6e+02 Score=26.06 Aligned_cols=109 Identities=9% Similarity=-0.008 Sum_probs=62.8
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.| ......+.++..+..
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG----vg~st~~ai~la~~A- 102 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAG----IGYSVDTAIELGKSA- 102 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE----ECSSHHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEec----CCcCHHHHHHHHHHH-
Confidence 45667777777888899999998866543322 22 223333333322 2222222 222334444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
++.|++++-+..-+ ....+.+.+.+.++ .|...++++..+-
T Consensus 103 ~~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 103 IDSGADCVMIHQPV--HPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HHTTCSEEEECCCC--CSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HHcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 47899998765433 23346777777765 4677789998876
No 169
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.15 E-value=2.5e+02 Score=25.85 Aligned_cols=110 Identities=15% Similarity=0.018 Sum_probs=63.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---GANNTVEAIALSQAAE 99 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHH
Confidence 45667777777888899999998866544332 222 2333333332 222222221 1223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 100 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 100 -KAGADYTLSVVPYY--NKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -HcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 78999987654332 2346777777764 4667799999875
No 170
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.15 E-value=1.9e+02 Score=26.54 Aligned_cols=110 Identities=12% Similarity=-0.019 Sum_probs=61.5
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+..
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a- 92 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---GANATAEAISLTQRF- 92 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHT-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCccHHHHHHHHHHH-
Confidence 45667777777888899999998866543332 22 223333333322 22222221 112223344333333
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
++.|++++-+..-+ ....+.+.+.+.++. |...++++..+-
T Consensus 93 ~~~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 93 NDSGIVGCLTVTPY--YNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp TTSSCSEEEEECCC--SSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred HhcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 36799988665433 233477888877754 666789998875
No 171
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=37.04 E-value=2.1e+02 Score=26.64 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=54.9
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC-hhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
+.|++++-+.-.......++.++-+++++.+.+. ..++.+++.. ..+.-+..+.+.+.|.....--.+.-......
T Consensus 44 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~ 123 (316)
T 3e96_A 44 DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAG 123 (316)
T ss_dssp TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHH
Confidence 5677766332222223556777776666655432 5678888742 22222333445566665432111111111222
Q ss_pred HHHHHHHHHHHHcCCCEEEEec-cCHHHHHHHHHHHH
Q 009282 270 EATTRAIRLAEFVNTPLYVVHV-MSMDAMEEIAKARK 305 (538)
Q Consensus 270 ~~i~~~l~~~~~~~~~~~~~h~-~~~~~~~~i~~~~~ 305 (538)
.-++....++...+.++++.+. ..... +.+.++++
T Consensus 124 ~l~~~f~~va~a~~lPiilYn~g~~l~~-~~~~~La~ 159 (316)
T 3e96_A 124 GVYAYFRDIIEALDFPSLVYFKDPEISD-RVLVDLAP 159 (316)
T ss_dssp HHHHHHHHHHHHHTSCEEEEECCTTSCT-HHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCH-HHHHHHHc
Confidence 3334444556666788888773 22222 56666664
No 172
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=36.34 E-value=2.7e+02 Score=25.93 Aligned_cols=110 Identities=14% Similarity=0.049 Sum_probs=60.3
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-+++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 55 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s- 133 (314)
T 3qze_A 55 QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPT- 133 (314)
T ss_dssp HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-
Confidence 668877754333333456677777776665543 24688888733 344445555666777654321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
+..-++....++...+.++++.+..... ..+.+.++++
T Consensus 134 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 134 -QEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp -HHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 2233444455667778999888863211 1256666664
No 173
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=36.00 E-value=2.7e+02 Score=25.91 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=60.3
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++. +..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 54 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~- 132 (315)
T 3si9_A 54 TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPN- 132 (315)
T ss_dssp HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 678877744322223455677777777666543 2568888873 3344444555666777654321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-++....++...+.++++.+..... ..+.+.++++
T Consensus 133 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 133 -QRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 2233444455666778999988863211 1266666765
No 174
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.82 E-value=2.7e+02 Score=25.89 Aligned_cols=110 Identities=11% Similarity=0.002 Sum_probs=63.2
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+...
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~~ai~la~~A~ 114 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---GSNSTSEAVELAKHAE 114 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHH
Confidence 45567777777888899999998866544332 222 2333333332 222222221 1223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 115 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 115 -KAGADAVLVVTPYY--NRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 78999987654332 2346777777764 4666799999875
No 175
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=35.65 E-value=2.1e+02 Score=25.33 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=56.0
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEEE
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik 201 (538)
.+++......++++..|++.+.-... .....+.++...+..+...+..+ +-.+ .+..+... ..|++++-
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~--t~~a~e~I~~l~~~~~~~~iGaG-----TVlt---~~~a~~Ai-~AGA~fIv 111 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR--SDAAVEAIRLLRQAQPEMLIGAG-----TILN---GEQALAAK-EAGATFVV 111 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTCEEEEE-----CCCS---HHHHHHHH-HHTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC--CCCHHHHHHHHHHhCCCCEEeEC-----CcCC---HHHHHHHH-HcCCCEEE
Confidence 45666677788888999998774322 22355666666554433222222 1112 23444444 67888873
Q ss_pred EEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhH
Q 009282 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (538)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~ 241 (538)
. +..+. ++++.++++|+++..-+.+..++
T Consensus 112 s-------P~~~~----~vi~~~~~~gi~~ipGv~TptEi 140 (232)
T 4e38_A 112 S-------PGFNP----NTVRACQEIGIDIVPGVNNPSTV 140 (232)
T ss_dssp C-------SSCCH----HHHHHHHHHTCEEECEECSHHHH
T ss_pred e-------CCCCH----HHHHHHHHcCCCEEcCCCCHHHH
Confidence 1 22333 44566778899988767666543
No 176
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=35.45 E-value=1.4e+02 Score=26.51 Aligned_cols=139 Identities=14% Similarity=0.021 Sum_probs=77.8
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcE
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 199 (538)
...+.+++......+..+|+-+++-. +.. ......+....-....-.+|..+. ...+....+.++.. +.|++.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~--p~~---v~~a~~l~~~~v~v~tVigFP~G~-~~~~~K~~E~~~Ai-~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS--PPL---VSVAAGVAPSGLAIAAVAGFPSGK-HVPGIKATEAELAV-AAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC--GGG---HHHHHHHCCTTCEEEEEESTTTCC-SCHHHHHHHHHHHH-HTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC--HHH---HHHHHHhcCCCCeEEEEecCCCCC-CcHHHHHHHHHHHH-HcCCCE
Confidence 45688889888999999999999843 221 122211110111111112222221 12244556677766 789999
Q ss_pred EEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHH
Q 009282 200 FKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (538)
Q Consensus 200 ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~ 275 (538)
+.+.++.. +.+..-.+++.++.++++ +.++-+=.+.... .+ . .+.+.+.++
T Consensus 97 IDmVinig~lk~g~~~~v~~ei~~v~~a~~--~~~lKvIiEt~~L-~~---~-------------------~t~eei~~a 151 (231)
T 3ndo_A 97 IDMVIDVGAALAGDLDAVSADITAVRKAVR--AATLKVIVESAAL-LE---F-------------------SGEPLLADV 151 (231)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCHHHH-HH---H-------------------TCHHHHHHH
T ss_pred EEEEeehHhhhcccHHHHHHHHHHHHHHcc--CCceEEEEECccc-CC---C-------------------CCHHHHHHH
Confidence 98877652 223333556666666664 5555544454321 00 0 013668888
Q ss_pred HHHHHHcCCCEEEEe
Q 009282 276 IRLAEFVNTPLYVVH 290 (538)
Q Consensus 276 l~~~~~~~~~~~~~h 290 (538)
.+++.+.|..++=+-
T Consensus 152 ~~ia~~aGADfVKTS 166 (231)
T 3ndo_A 152 CRVARDAGADFVKTS 166 (231)
T ss_dssp HHHHHHTTCSEEECC
T ss_pred HHHHHHHCcCEEEcC
Confidence 888999998876543
No 177
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.35 E-value=2.7e+02 Score=25.58 Aligned_cols=110 Identities=11% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+...
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---GANSTREAIELTKAAK 93 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---CCCCHHHHHHHHHHHH
Confidence 45567777777888899999998866544332 222 2333333332 222222221 1223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++.+-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 94 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 94 -DLGADAALLVTPYY--NKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp -HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 2346777777764 4667799999875
No 178
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=34.81 E-value=2.8e+02 Score=25.66 Aligned_cols=110 Identities=12% Similarity=0.000 Sum_probs=63.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +.++-.|. ......+..+..+...
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---GTNNTRTSVELAEAAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---CCCCHHHHHHHHHHHH
Confidence 45667777777888899999998866543332 22 222333333322 22222221 1223344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 109 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 109 -SAGADGLLVVTPYY--SKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 23467777777754 667789998865
No 179
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=34.81 E-value=2.8e+02 Score=25.74 Aligned_cols=108 Identities=11% Similarity=0.010 Sum_probs=62.1
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhcccceeeeeeeeee-cCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+...+..+ ..+.. ....+..+..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpV----iaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQV----IVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEE----EEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcE----EEecCCCCHHHHHHHHHHHH
Confidence 45667777777888899999998866543332 22 2333333333322222 22222 23344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcC--CeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLG--ALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g--~~v~~H~ 235 (538)
+.|++++-+..-+ +..+.+.+.+.++. |...+ +++..+-
T Consensus 100 -~~Gadavlv~~P~---~~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 100 -DAGAAGVMIAPPP---SLRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp -HHTCSEEEECCCT---TCCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred -HcCCCEEEECCCC---CCCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 7899998764332 23577788777754 56667 9998875
No 180
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.77 E-value=2.7e+02 Score=25.98 Aligned_cols=110 Identities=9% Similarity=0.042 Sum_probs=63.2
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.+. ......+..+..+...
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---SDLTTAKTVRRAQFAE 116 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHHH
Confidence 45567777777888899999998866543332 22 23333333332 222222221 1223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. +..+.+.+.+.++ .|...++++..+-
T Consensus 117 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 117 -SLGAEAVMVLPISY--WKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp -HTTCSEEEECCCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 78999987654332 2346777777764 4667789999875
No 181
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=34.76 E-value=2.1e+02 Score=26.47 Aligned_cols=121 Identities=15% Similarity=0.071 Sum_probs=71.2
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeee--CCCccCC-HHHHHHHHHHH---HhcCCeEEEEcCChhhHHHHHHHHHHcCCCC
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEGFKRC---KSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~~~~A---~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~ 255 (538)
+...+...++. +.|++.+.+.... +|....+ .+++++++... ++.+.++.+-......++..++. |..-
T Consensus 46 ~~a~~~a~~~v-~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~a----Ga~i 120 (294)
T 2y5s_A 46 DDALRRAERMI-AEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAA----GADL 120 (294)
T ss_dssp THHHHHHHHHH-HTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHH----TCSE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHc----CCCE
Confidence 34556666666 8899999876532 3333333 56666655443 33489999998887655555543 5421
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc----C----------------HHHHHHHHHHHHcCCc---EEE
Q 009282 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM----S----------------MDAMEEIAKARKAGQR---VIG 312 (538)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~----~----------------~~~~~~i~~~~~~g~~---v~~ 312 (538)
.-.-+ ... ..+++.++.+.+.++++.|.. + ..-.+.++.+.+.|+. ++.
T Consensus 121 INdVs-------g~~-d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil 192 (294)
T 2y5s_A 121 INDIW-------GFR-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV 192 (294)
T ss_dssp EEETT-------TTC-STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEECC-------CCC-chHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE
Confidence 10000 000 224567788899999999962 0 0012455566778886 777
Q ss_pred ecc
Q 009282 313 EPV 315 (538)
Q Consensus 313 ~~~ 315 (538)
+|.
T Consensus 193 DPG 195 (294)
T 2y5s_A 193 DPG 195 (294)
T ss_dssp ECC
T ss_pred eCC
Confidence 764
No 182
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=34.73 E-value=2.2e+02 Score=26.12 Aligned_cols=108 Identities=9% Similarity=0.000 Sum_probs=61.1
Q ss_pred CChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHHHH
Q 009282 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (538)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (538)
.+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+.. ++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---g~~~t~~ai~la~~a-~~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---GSNNTAASIAMSKWA-ES 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHH-HH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHH-Hh
Confidence 666777777888899999998865533322 22 233333333322 22222221 122234444444444 37
Q ss_pred cCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 195 KGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 95 ~Gadavlv~~P~y--~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 95 IGVDGLLVITPYY--NKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TTCSEEEEECCCS--SCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred cCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8999987654332 33477888777754 667789998875
No 183
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.20 E-value=2.8e+02 Score=25.46 Aligned_cols=110 Identities=10% Similarity=0.002 Sum_probs=60.6
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-- 109 (292)
T 2vc6_A 32 EEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP-- 109 (292)
T ss_dssp HTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC--
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC--
Confidence 678888744322223456777777777766553 25788888843 333444555666777664321111 122
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
....-++....++...+.++++.+..... ..+.+.++++
T Consensus 110 s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 110 TQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 22233344445667778899887753211 1256666665
No 184
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=34.02 E-value=2.9e+02 Score=25.68 Aligned_cols=110 Identities=10% Similarity=0.014 Sum_probs=62.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.+. ......+..+..+...
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---g~~st~eai~la~~A~ 115 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---GANSTREAVALTEAAK 115 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHH
Confidence 44566777777788899999988866543332 22 22333333332 222222221 1223344454444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. +..+.+.+.+.++ .|...++++..+-
T Consensus 116 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 116 -SGGADACLLVTPYY--NKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred -HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999987654332 2346777777664 4667799999875
No 185
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=33.90 E-value=3e+02 Score=25.82 Aligned_cols=110 Identities=10% Similarity=-0.062 Sum_probs=62.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+..
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A- 125 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---GALRTDEAVALAKDA- 125 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---CCSSHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---CCCCHHHHHHHHHHH-
Confidence 45667777777888899999998866543332 22 233333333322 22222221 122234444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
++.|++++-+..-+ ....+.+.+.+.++. |...++++..+-
T Consensus 126 ~~~Gadavlv~~P~--Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 126 EAAGADALLLAPVS--YTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp HHHTCSEEEECCCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred HhcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 37899998665333 233477777777754 677789999875
No 186
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=33.84 E-value=2.3e+02 Score=26.54 Aligned_cols=106 Identities=13% Similarity=0.002 Sum_probs=66.4
Q ss_pred CChhhHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHH-h-cCCeEEEEcCChhhHHHHHHHHHHcCCCCcc
Q 009282 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK-S-LGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 180 ~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~-~-~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~ 257 (538)
.+-+..+.+-+.+++.+...|--. +.........+.+..++..+. + .++||..|....... +.+..+++.|.++..
T Consensus 26 ~n~e~~~Ail~AAee~~sPvIlq~-s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~~-e~i~~ai~~GFtSVM 103 (323)
T 2isw_A 26 NNMEQIQGIMKAVVQLKSPVILQC-SRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTL-ESVKMAIDLGFSSVM 103 (323)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEE-EHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSH-HHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC-ChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCH-HHHHHHHHcCCCeEE
Confidence 344556666565555565544222 211111123455666665544 4 689999999554333 446667788988776
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEE
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 287 (538)
......|.+...+...+.+++++..|..+-
T Consensus 104 iDgS~~p~eENi~~Tk~vv~~ah~~gvsVE 133 (323)
T 2isw_A 104 IDASHHPFDENVRITKEVVAYAHARSVSVE 133 (323)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 665667777788888899999988876653
No 187
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.74 E-value=2.9e+02 Score=25.50 Aligned_cols=110 Identities=11% Similarity=0.032 Sum_probs=63.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHhc--ccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAK--NSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+... +..+-.|. ......+..+..+..
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---g~~~t~~ai~la~~a 99 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---GSNATHEAVGLAKFA 99 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---CCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---CCCCHHHHHHHHHHH
Confidence 44566777777888899999999876544432 222 23333333322 22222221 122334444444444
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
. +.|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 100 ~-~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 100 K-EHGADGILSVAPYY--NKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp H-HTTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred H-HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 4 78999987654332 2346777777765 4667799999875
No 188
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=33.73 E-value=90 Score=27.94 Aligned_cols=133 Identities=13% Similarity=-0.005 Sum_probs=75.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeec---CChhhHHHHHHHHHHcC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK---WDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g 196 (538)
+..+.+++......+..+|+-+++-. |.. .....+.+ ....+.++...+++. ..+....+.++.. +.|
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~--p~~--v~~a~~~L----~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai-~~G 108 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN--PTW--VPLCAELL----KGTGVKVCTVIGFPLGATPSEVKAYETKVAV-EQG 108 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC--GGG--HHHHHHHH----TTSSCEEEEEESTTTCCSCHHHHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC--HHH--HHHHHHHh----CCCCCeEEEEeccCCCCCchHHHHHHHHHHH-HcC
Confidence 45688889888999999999999843 211 22222222 111122222222221 2244566677777 679
Q ss_pred CcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHH
Q 009282 197 INSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272 (538)
Q Consensus 197 ~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i 272 (538)
++.+.+.++.. +.+..-.+++.++.+++.. ..+-+=.+.... ..+.+
T Consensus 109 AdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~--~~lKVIlEt~~L---------------------------t~eei 159 (239)
T 3ngj_A 109 AEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGK--ALTKVIIECCYL---------------------------TNEEK 159 (239)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTT--SEEEEECCGGGS---------------------------CHHHH
T ss_pred CCEEEEEeehHHhccccHHHHHHHHHHHHHHhcC--CceEEEEecCCC---------------------------CHHHH
Confidence 99998877652 2223335566666666653 333333343311 12457
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 009282 273 TRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 273 ~~~l~~~~~~~~~~~~~h 290 (538)
.++.+++.+.|..++=+-
T Consensus 160 ~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 160 VEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHCcCEEECC
Confidence 777888888888776543
No 189
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=33.69 E-value=39 Score=33.39 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeee----CCCccCCHHHHHHHHHHHHhcCCeEEEEcCCh
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~ 238 (538)
+...+++++.. +.|..++++...+ .+...++.+.+..+++.+.++|++|.+|....
T Consensus 175 ~~a~~EL~r~~-~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 175 TRAVEEVDFVL-ARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHHHHHHH-HTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHH-HcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 45778888888 6899999976432 23345667889999999999999999999653
No 190
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.23 E-value=2.9e+02 Score=25.38 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=62.1
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHH---HHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ...+ .++...+... +..+-.|. ......+..+..+..
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g~~~t~~ai~la~~A- 94 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---LVDSIEDAADQSAEA- 94 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---CCSSHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCccHHHHHHHHHHH-
Confidence 45667777777888899999998866543332 2222 2223232221 22222221 122234444444444
Q ss_pred HHcCCcEEEEEeeeCCCcc-CCHHHHHHHHHH-HHhc---CCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFM-INDELLIEGFKR-CKSL---GALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~~~-A~~~---g~~v~~H~ 235 (538)
++.|++++-+..-+. .. .+.+.+.+.++. |... ++++..+-
T Consensus 95 ~~~Gadavlv~~P~y--~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 95 LNAGARNILLAPPSY--FKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp HHTTCSEEEECCCCS--SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred HhcCCCEEEEcCCcC--CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 378999987654332 23 477888777754 6666 89998875
No 191
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=32.69 E-value=2.7e+02 Score=25.95 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=63.9
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.+. .....+..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----g~~t~~ai~la~~A~ 103 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----GYATSTAIELGNAAK 103 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----CSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----CcCHHHHHHHHHHHH
Confidence 45667777777888899999999866543332 22 23333333333 233333332 223344444444444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 104 -~~Gadavlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 104 -AAGADAVMIHMPIH--PYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp -HHTCSEEEECCCCC--SCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred -hcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999987653332 3347777777764 4566789999875
No 192
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=32.31 E-value=63 Score=29.93 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=25.9
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
++|.|+|...+ .|..+++.+ .+.+.+.|++.+.
T Consensus 3 ~~DLH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~ia 35 (292)
T 2yb1_A 3 NIDLHFHSRTS-DGALTPTEV---IDRAAARAPALLA 35 (292)
T ss_dssp CEECCBCCTTT-TCSSCHHHH---HHHHHTTCCSEEE
T ss_pred ccccccCCCcc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 68999999876 455566554 7888999998876
No 193
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=31.71 E-value=3e+02 Score=25.12 Aligned_cols=107 Identities=9% Similarity=0.041 Sum_probs=0.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC------CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (538)
+..+.+.+.......+.+||..++-.+..+.. .-.+.++...+.... -+.+.......+..+..+...
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----vi~Gvg~~~t~~ai~la~~A~- 87 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-----VIVQVASLNADEAIALAKYAE- 87 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-----EEEECCCSSHHHHHHHHHHHH-
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----EEEeeCCCCHHHHHHHHHHHH-
Q ss_pred HcCCcEEEEEeeeCCC-ccCCHHHHHHHHHH-HHhcCCeEEEE
Q 009282 194 EKGINSFKFFMAYKGS-FMINDELLIEGFKR-CKSLGALAMVH 234 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~-~~~~~~~l~~~~~~-A~~~g~~v~~H 234 (538)
+.|++++-+..-+... + +.+.+.+.++. |...++++..+
T Consensus 88 ~~Gadavlv~~P~y~~~~--s~~~l~~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 88 SRGAEAVASLPPYYFPRL--SERQIAKYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp HTTCSEEEECCSCSSTTC--CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred hcCCCEEEEcCCcCCCCC--CHHHHHHHHHHHHHhcCCCEEEE
No 194
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=31.66 E-value=3.3e+02 Score=25.53 Aligned_cols=42 Identities=10% Similarity=-0.027 Sum_probs=32.1
Q ss_pred CchHHHHHHHHHHHHHHH-cCCCEEEEeccCHHHHHHHHHHHHcC
Q 009282 264 PPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAG 307 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~-~~~~~~~~h~~~~~~~~~i~~~~~~g 307 (538)
+.....+..++.++++.+ .+.++ +.|+..+.. +.++.+++.+
T Consensus 148 ~~~~Q~~~F~~ql~lA~e~~~lPv-iiH~r~A~~-d~l~iL~~~~ 190 (325)
T 3ipw_A 148 DKETQLSGYRTLSILHQKYPYLPF-FFHCRKSWS-DLCQLNKELG 190 (325)
T ss_dssp CHHHHHHHHHHTHHHHHHCTTCCE-EEEEESCHH-HHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHhhCCeE-EEEeCchHH-HHHHHHHhcC
Confidence 345556778899999999 99997 568877665 7888887765
No 195
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=30.93 E-value=2.8e+02 Score=24.54 Aligned_cols=86 Identities=8% Similarity=-0.073 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCcEEEEE-eeeCCCccCCHHHHHHHHHHHHhcCCeEE-EEcCCh-h-hHHHHHHHHHHcCCCCccccc
Q 009282 185 SDEMEVMVKEKGINSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAM-VHAENG-D-AVFEGQKRMIELGITGPEGHA 260 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~-~H~~~~-~-~~~~~~~~~~~~g~~~~~~~~ 260 (538)
..+..+.+++.|.+.+.+. ...... ..+...+.++.+.++++|+.+. +|.... . .....
T Consensus 16 ~~~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~---------------- 78 (278)
T 1i60_A 16 LKLDLELCEKHGYDYIEIRTMDKLPE-YLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKG---------------- 78 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEETTTHHHH-HTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHH----------------
T ss_pred HHHHHHHHHHhCCCEEEEccHHHHHH-HhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHH----------------
Confidence 3333344447899998876 432110 1123445666777788999876 665320 0 00000
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 261 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
.....+.+.+.++++..+|.+.+..|.
T Consensus 79 ----~~~~~~~~~~~i~~a~~lG~~~v~~~~ 105 (278)
T 1i60_A 79 ----HNEIITEFKGMMETCKTLGVKYVVAVP 105 (278)
T ss_dssp ----HHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ----HHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 011235678888889999988877764
No 196
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.91 E-value=2.8e+02 Score=25.59 Aligned_cols=110 Identities=10% Similarity=0.007 Sum_probs=64.3
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CH---HHHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. .. .+.++...+.. .+..+-.+. ......+..+..+...
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGV---ASTSVADAVAQAKLYE 96 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEE---EESSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---CCCCHHHHHHHHHHHH
Confidence 45667777777888899999988866543322 22 23333333332 222332221 2223344555454444
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. +..+.+.+.+.++. |...++++..+-
T Consensus 97 -~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 97 -KLGADGILAILEAY--FPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp -HHTCSEEEEEECCS--SCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 78999987654432 23477777777754 667789999876
No 197
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=30.76 E-value=2e+02 Score=27.73 Aligned_cols=93 Identities=8% Similarity=0.117 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEec
Q 009282 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (538)
Q Consensus 212 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~ 291 (538)
++.+.++.+.+.+++.|+.+..-+.+...+ +.+..+++....--+. + ..=-.+++.....+.++++.-.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~sv----d~l~~~~vd~~KIgS~------~-~~N~pLL~~va~~gKPViLStG 166 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSA----DLLQSTSPSAFKIASY------E-INHLPLLKYVARLNRPMIFSTA 166 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHH----HHHHTTCCSCEEECGG------G-TTCHHHHHHHHTTCSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHH----HHHHhcCCCEEEECcc------c-ccCHHHHHHHHhcCCeEEEECC
Confidence 578899999999999999999877766443 3344445433210000 0 0011245555567888877443
Q ss_pred -cCHHHHH-HHHHHHHcCC-cEEEecc
Q 009282 292 -MSMDAME-EIAKARKAGQ-RVIGEPV 315 (538)
Q Consensus 292 -~~~~~~~-~i~~~~~~g~-~v~~~~~ 315 (538)
++..+++ .++.+.+.|. .++.+-|
T Consensus 167 maTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 167 GAEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp TCCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 3333322 2333455554 5665544
No 198
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=30.76 E-value=3e+02 Score=26.86 Aligned_cols=55 Identities=20% Similarity=0.165 Sum_probs=34.8
Q ss_pred CC-ceEEeCCCCCCChhhhhcCccCcccCCCCCcchhhhHHHHHHHhhhcCCCCHHHHHHHHhHhHHHHcC
Q 009282 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFN 428 (538)
Q Consensus 359 Gv-~~~lgtD~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ls~~eal~~aT~~~A~~lg 428 (538)
|+ .+.||||.-.... +.|+.. ...++.+...+.+.| +|.+|+=+.+-.|.-+.+.
T Consensus 351 G~dhVgiGsDfDG~~~-------------~~gl~d-vs~~p~L~~~Ll~rG-~se~di~ki~g~N~lRvl~ 406 (417)
T 2rag_A 351 GPKGVCVGADWDGGGG-------------MDGFED-ITDLPKITARLKAEG-YSDADIEAIWSGNVLRIVD 406 (417)
T ss_dssp CTTSEEECCCTTTTCC-------------BBTBSS-GGGTHHHHHHHHHTT-CCHHHHHHHHTHHHHHHHH
T ss_pred CCceEEEccCCCCCCC-------------CCCCCC-HHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHH
Confidence 55 6899999642210 112222 224555555566655 9999999988888888775
No 199
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=30.39 E-value=4.4e+02 Score=26.68 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=63.4
Q ss_pred HHHHHHHHHhCCcEEEecccCCCCC-CHHHHHHHHHHHhcccceeeeeeee-eecCChhhHHHHHHHHHHcCCcEEEEEe
Q 009282 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINSFKFFM 204 (538)
Q Consensus 127 ~~~~~~~~l~~GvTt~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~ik~~~ 204 (538)
.......++.+|+..++-....++. .....++...+.+.. +...+... ....+.+...++.+.+.+.|++.+.+-
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~--v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~- 195 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKH--AQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALK- 195 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCE--EEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCe--EEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeC-
Confidence 3445677888999877744322222 333444444333322 22122111 112233444444333337899877552
Q ss_pred eeCCCccCCHHHHHHHHHHHHh-c--CCeEEEEcCChhh-HHHHHHHHHHcCCC
Q 009282 205 AYKGSFMINDELLIEGFKRCKS-L--GALAMVHAENGDA-VFEGQKRMIELGIT 254 (538)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~A~~-~--g~~v~~H~~~~~~-~~~~~~~~~~~g~~ 254 (538)
+..| ...+..+.++++..++ . +.++.+|+++... .-.........|..
T Consensus 196 DT~G--~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~ 247 (539)
T 1rqb_A 196 DMAA--LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVD 247 (539)
T ss_dssp ETTC--CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCS
T ss_pred CCCC--CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCC
Confidence 3222 3468888888777654 4 6889999866432 22222334556664
No 200
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=30.36 E-value=3.2e+02 Score=25.04 Aligned_cols=109 Identities=11% Similarity=0.056 Sum_probs=61.4
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-- 109 (294)
T 2ehh_A 32 DNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP-- 109 (294)
T ss_dssp TTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC--
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC--
Confidence 678888755333233456788777777766553 25788888843 334444555667777764321111 122
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~ 304 (538)
....-++....++...+.++++.+..... ..+.+.+++
T Consensus 110 s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 110 TQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 22233344445667778899888854221 125666665
No 201
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.21 E-value=3.4e+02 Score=25.21 Aligned_cols=111 Identities=11% Similarity=-0.031 Sum_probs=62.8
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc--CCeEEEEcC--ChhhHHHHHHHHHHcCCCCcccccccCCchHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~--g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (538)
+.|++++-+.-.......++.++-.++++.+.+. ..++.+++. +..+.-+..+.+.+.|..+..--.+. ......
T Consensus 40 ~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~-~~~s~~ 118 (313)
T 3dz1_A 40 EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP-SLRTDE 118 (313)
T ss_dssp HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT-TCCSHH
T ss_pred HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC-CCCCHH
Confidence 6788887554333334567777777777665543 578888883 33444455556677777543221111 111222
Q ss_pred HHHHHHHHHHHHcC--CCEEEEeccCHH----HHHHHHHHHH
Q 009282 270 EATTRAIRLAEFVN--TPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 270 ~~i~~~l~~~~~~~--~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
.-++....++...+ .++++.+..... ..+.+.++++
T Consensus 119 ~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 119 QITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 33444445566666 899888864211 1266777764
No 202
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=30.17 E-value=3.2e+02 Score=24.97 Aligned_cols=111 Identities=9% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGI 197 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 197 (538)
+..+.+.+.......+.+|+..++-.+..+.. ...+......+......-. -+.+.......+..+..+... +.|+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~-~~Ga 92 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSN-EMDI 92 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHH-TSCC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHH-hcCC
Q ss_pred cEEEEEeeeCCC-ccCCHHHHHHHHHH-HHhcCCeEEEE
Q 009282 198 NSFKFFMAYKGS-FMINDELLIEGFKR-CKSLGALAMVH 234 (538)
Q Consensus 198 ~~ik~~~~~~~~-~~~~~~~l~~~~~~-A~~~g~~v~~H 234 (538)
+++-+..-+... + +.+.+.+.++. |...++++..+
T Consensus 93 davlv~~P~y~~~~--s~~~l~~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 93 LGVSSHSPYYFPRL--PEKFLAKYYEEIARISSHSLYIY 129 (288)
T ss_dssp SEEEECCCCSSCSC--CHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CEEEEcCCcCCCCC--CHHHHHHHHHHHHHhcCCCEEEE
No 203
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=30.09 E-value=3.6e+02 Score=25.48 Aligned_cols=112 Identities=10% Similarity=0.073 Sum_probs=61.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccccCCc-hHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPP-LLEGE 270 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~ 270 (538)
+.|++++-+.-.......++.++-.++++.+-....++.+++.. ..+.-+..+.+.+.|.....--.+.-.. .....
T Consensus 58 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~ 137 (344)
T 2hmc_A 58 ADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAA 137 (344)
T ss_dssp HTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHH
T ss_pred HcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHH
Confidence 67888875433333345678888888877744456788888843 3334445555666776543211110001 11222
Q ss_pred HHHHHHHHHH-HcCCCEEEEecc----CHHHHHHHHHH-HHc
Q 009282 271 ATTRAIRLAE-FVNTPLYVVHVM----SMDAMEEIAKA-RKA 306 (538)
Q Consensus 271 ~i~~~l~~~~-~~~~~~~~~h~~----~~~~~~~i~~~-~~~ 306 (538)
-++....++. ..+.++++.+.. ... .+.+.++ ++.
T Consensus 138 l~~~f~~IA~aa~~lPiilYn~P~tg~~l~-~e~~~~L~a~~ 178 (344)
T 2hmc_A 138 QKAHFKAILSAAPEIPAVIYNSPYYGFATR-ADLFFALRAEH 178 (344)
T ss_dssp HHHHHHHHHHHSTTSCEEEEEBGGGTBCCC-HHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCcEEEEecCccCCCcC-HHHHHHHHhcC
Confidence 2334444566 567899888865 122 2666666 544
No 204
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.57 E-value=3.2e+02 Score=25.02 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=57.3
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCCh--hhHHHHHHHHHHcCCCCccccc--ccCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAENG--DAVFEGQKRMIELGITGPEGHA--LSRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~~--~~~~~~~~~~~~~g~~~~~~~~--~~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++... .+.-+..+.+.+.|..+..--. ...|
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-- 110 (292)
T 2ojp_A 33 ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRP-- 110 (292)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCC--
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC--
Confidence 678888755333333456777777777766543 257888888432 3333333444455554321111 0112
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
....-++....++...+.++++.+..... ..+.+.++++
T Consensus 111 s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 111 SQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 22222334444566667888887753211 1256666654
No 205
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.42 E-value=2.8e+02 Score=25.59 Aligned_cols=111 Identities=11% Similarity=0.061 Sum_probs=58.7
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEc--CChhhHHHHHHHHHHcCCCCcccccccCCchHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHA--ENGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 268 (538)
+.|++++-+.-.......++.++-.++++.+.+ ..+++.+++ .+..+.-+..+.+.+.|.....--.+.-.....
T Consensus 36 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 115 (300)
T 3eb2_A 36 QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKD 115 (300)
T ss_dssp HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCH
T ss_pred HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 567777633222222345677777776665543 246777777 334444455556666776543211111001122
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeccC-----HHHHHHHHHHHH
Q 009282 269 GEATTRAIRLAEFVNTPLYVVHVMS-----MDAMEEIAKARK 305 (538)
Q Consensus 269 ~~~i~~~l~~~~~~~~~~~~~h~~~-----~~~~~~i~~~~~ 305 (538)
..-++....++...+.++++.+... ... +.+.++++
T Consensus 116 ~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~-~~~~~La~ 156 (300)
T 3eb2_A 116 AQIESYFRAIADAVEIPVVIYTNPQFQRSDLTL-DVIARLAE 156 (300)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEEECccccCCCCCH-HHHHHHHc
Confidence 2334444556677788998888643 222 66666654
No 206
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=29.29 E-value=3.5e+02 Score=25.07 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcC--ChhhHHHHHHHHHHcCCCCccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.++..-+..-+.|++++-+.-.......++.++-.++++.+.+ ...++.+++. +..+.-+..+.+.+.|..+..-
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEE
Confidence 3333333333678888765433334466788888777776654 3578999983 3344445556677777754321
Q ss_pred ccc-----cCCchHHHHHHHHHHHHHHHcCCCEEEEeccC----HHHHHHHHHHHH
Q 009282 259 HAL-----SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARK 305 (538)
Q Consensus 259 ~~~-----~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~----~~~~~~i~~~~~ 305 (538)
-.+ ..|. ...-.+....++...+.++++.+... ... +.+.++++
T Consensus 110 ~~Pyy~~~~~~s--~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~-~~~~~La~ 162 (309)
T 3fkr_A 110 MPPYHGATFRVP--EAQIFEFYARVSDAIAIPIMVQDAPASGTALSA-PFLARMAR 162 (309)
T ss_dssp CCSCBTTTBCCC--HHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCH-HHHHHHHH
T ss_pred cCCCCccCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCH-HHHHHHHh
Confidence 111 1222 22334444556677789998888642 222 66666764
No 207
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=28.96 E-value=3.5e+02 Score=24.98 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=60.4
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 48 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~- 126 (304)
T 3cpr_A 48 DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPS- 126 (304)
T ss_dssp HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 678888754333233456677777777766543 35788888843 334444555666777664321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-++....++...+.++++.+..... ..+.+.++++
T Consensus 127 -~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 127 -QEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp -HHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 2233344445667778899888863211 1255666654
No 208
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.79 E-value=3.4e+02 Score=24.80 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~ 258 (538)
..+.+.+..-+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..-
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 101 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLS 101 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 3333333333678888755433333456788777777766543 25789888843 334444555667777764321
Q ss_pred ccc--cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHH
Q 009282 259 HAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (538)
Q Consensus 259 ~~~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~ 304 (538)
-.+ ..|. ...-.+....++...+.++++.+..... ..+.+.+++
T Consensus 102 ~~P~y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 102 ITPYYNKPT--QEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp ECCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 111 1222 2233344445667778899888754221 125666665
No 209
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.60 E-value=2e+02 Score=25.50 Aligned_cols=108 Identities=17% Similarity=0.115 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCc
Q 009282 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (538)
Q Consensus 186 ~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (538)
.+.-+.+++.|.+.+.++... .+...+.++.+..+++|+.+..+...... ... .....
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-------------~~~----d~~~r 78 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQ-----VAAIGLGEAGRIVRANGLKLTGLCRGGFF-------------PAP----DASGR 78 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHH-----HHHHCHHHHHHHHHHHTCEESCEEEEECC-------------CCS----SHHHH
T ss_pred HHHHHHHHHcCCCEEEecccc-----ccccCHHHHHHHHHHcCCceEEeecCCCc-------------CCC----CHHHH
Confidence 333344447899988765421 13445666777778888887765421100 000 00000
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEeccCH---------------HHH-HHHHHHHHcCCcEEEecc
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSM---------------DAM-EEIAKARKAGQRVIGEPV 315 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~~~---------------~~~-~~i~~~~~~g~~v~~~~~ 315 (538)
....+.+.+.++.+..+|.+.+..|.... ..+ +..+.+++.|+.+..++.
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 11235677888888888888777775211 011 222334567888877654
No 210
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=28.48 E-value=2.2e+02 Score=24.91 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=61.3
Q ss_pred CCChhhHHHHHHHHHhCCcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCCcEE
Q 009282 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSF 200 (538)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i 200 (538)
..+++......++++..|++.+.-... .....+.++...+..+...+..+ +-.+ .+..+... ..|++++
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~--t~~a~~~I~~l~~~~p~~~IGAG-----TVlt---~~~a~~ai-~AGA~fi 89 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLR--TEAGLAAISAIKKAVPEAIVGAG-----TVCT---ADDFQKAI-DAGAQFI 89 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTSEEEEE-----CCCS---HHHHHHHH-HHTCSEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCC--CccHHHHHHHHHHHCCCCeEeec-----cccC---HHHHHHHH-HcCCCEE
Confidence 356777778889999999998774322 22466777777665544333322 2122 34445555 7799887
Q ss_pred EEEeeeCCCccCCHHHHHHHHHHHHhcCC------eEEEEcCChhhHH
Q 009282 201 KFFMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAVF 242 (538)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~A~~~g~------~v~~H~~~~~~~~ 242 (538)
-. +..++ ++++.|+++++ ++.--+.+..++.
T Consensus 90 vs-------P~~~~----evi~~~~~~~v~~~~~~~~~PG~~TptE~~ 126 (217)
T 3lab_A 90 VS-------PGLTP----ELIEKAKQVKLDGQWQGVFLPGVATASEVM 126 (217)
T ss_dssp EE-------SSCCH----HHHHHHHHHHHHCSCCCEEEEEECSHHHHH
T ss_pred Ee-------CCCcH----HHHHHHHHcCCCccCCCeEeCCCCCHHHHH
Confidence 32 22344 45567777888 8887777765543
No 211
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=28.39 E-value=3.5e+02 Score=24.88 Aligned_cols=110 Identities=13% Similarity=0.136 Sum_probs=59.2
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s- 122 (301)
T 1xky_A 44 DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPS- 122 (301)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-
Confidence 678887754332223455677777777766543 25788888843 333444555566677654321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
+..-++....++...+.++++.+..... ..+.+.++++
T Consensus 123 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 123 -QEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp -HHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 2223334445566678898888754211 1256666654
No 212
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=28.33 E-value=3.8e+02 Score=25.25 Aligned_cols=109 Identities=9% Similarity=0.020 Sum_probs=59.1
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|.....--.+ ..|
T Consensus 63 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~-- 140 (343)
T 2v9d_A 63 KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKV-- 140 (343)
T ss_dssp HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCC--
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC--
Confidence 678887754333223456677777777665543 25788888843 333444555566677654321111 122
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~ 304 (538)
....-++....++...+.++++.+..... ..+.+.+++
T Consensus 141 s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 141 SEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp CHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 22223334445566678899888763211 125666665
No 213
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=28.04 E-value=2.9e+02 Score=25.72 Aligned_cols=115 Identities=9% Similarity=-0.119 Sum_probs=0.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKG 196 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (538)
+..+.+.+.......+.+||..++-.+..+.. ...+..+..........-......+....+-...-++.+.+++.|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Q ss_pred CcEEEEEee-eCCCccCCHHHHHHHHHHHHhcCCeEEEE
Q 009282 197 INSFKFFMA-YKGSFMINDELLIEGFKRCKSLGALAMVH 234 (538)
Q Consensus 197 ~~~ik~~~~-~~~~~~~~~~~l~~~~~~A~~~g~~v~~H 234 (538)
++++-+..- |...+....+.++-.-+.|...++++..+
T Consensus 107 adavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 107 ANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEE
No 214
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=27.97 E-value=3e+02 Score=25.72 Aligned_cols=120 Identities=18% Similarity=0.134 Sum_probs=67.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEEeee--CCCc----cC-CHHHHHHH---HHHHHh-cCCeEEEEcCChhhHHHHHHHHHHc
Q 009282 183 VVSDEMEVMVKEKGINSFKFFMAY--KGSF----MI-NDELLIEG---FKRCKS-LGALAMVHAENGDAVFEGQKRMIEL 251 (538)
Q Consensus 183 ~~~~~~~~~~~~~g~~~ik~~~~~--~~~~----~~-~~~~l~~~---~~~A~~-~g~~v~~H~~~~~~~~~~~~~~~~~ 251 (538)
..++..+++. +.|++.+.+.... +|.. .. ..++++++ ++..++ .+.++.+-......++..++ .
T Consensus 50 ~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~----a 124 (314)
T 3tr9_A 50 SALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVN----T 124 (314)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHH----H
T ss_pred HHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHH----c
Confidence 3455566666 7899988775422 2221 11 24554443 343333 48999998888765555554 3
Q ss_pred CCCCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCH------------------HHHHHHHHHHHcCCc---E
Q 009282 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------------------DAMEEIAKARKAGQR---V 310 (538)
Q Consensus 252 g~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~------------------~~~~~i~~~~~~g~~---v 310 (538)
|..-.-.-. - ....+++.++...+.++++.|.... .-.+.++.+.+.|+. +
T Consensus 125 Ga~iINDVs---g-----~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~I 196 (314)
T 3tr9_A 125 GADMINDQR---A-----LQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRI 196 (314)
T ss_dssp TCCEEEETT---T-----TCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CCCEEEECC---C-----CCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHE
Confidence 542110000 0 0022566777788999999996421 112455667778884 7
Q ss_pred EEecc
Q 009282 311 IGEPV 315 (538)
Q Consensus 311 ~~~~~ 315 (538)
+.+|.
T Consensus 197 ilDPG 201 (314)
T 3tr9_A 197 IIDPG 201 (314)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 77764
No 215
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.56 E-value=3.6e+02 Score=24.69 Aligned_cols=107 Identities=10% Similarity=-0.005 Sum_probs=59.5
Q ss_pred ChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHHHHc
Q 009282 123 TIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (538)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (538)
+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+... +.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a~-~~ 96 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---GTNDTEKSIQASIQAK-AL 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---CCSCHHHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---CcccHHHHHHHHHHHH-Hc
Confidence 44556666777889999998866543332 222 2333333332 222222221 1223344444444444 78
Q ss_pred CCcEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 196 GINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
|++++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 97 Gadavlv~~P~y--~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 97 GADAIMLITPYY--NKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp TCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 999987654332 2346777777664 4566799999875
No 216
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=27.33 E-value=3.9e+02 Score=25.04 Aligned_cols=111 Identities=11% Similarity=-0.005 Sum_probs=62.1
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 66 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s- 144 (332)
T 2r8w_A 66 AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLT- 144 (332)
T ss_dssp HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 678888755433333456788777777776543 25788888843 334444555666777764321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
...-++....++...+.++++.+..... ..+.+.++++.
T Consensus 145 -~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~ 187 (332)
T 2r8w_A 145 -QEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYI 187 (332)
T ss_dssp -HHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTS
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC
Confidence 2223344445667778899888753211 12666666643
No 217
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=27.11 E-value=3.8e+02 Score=24.83 Aligned_cols=111 Identities=10% Similarity=0.080 Sum_probs=60.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCC-CCccccc--ccCCc
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGI-TGPEGHA--LSRPP 265 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~-~~~~~~~--~~~~~ 265 (538)
+.|++++-+.-.......++.++-+++++.+.+. ..++.+++.. ..+.-+..+.+.+.|. .+..--. ...|.
T Consensus 39 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s 118 (311)
T 3h5d_A 39 AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPS 118 (311)
T ss_dssp HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCC
Confidence 6788877554333334567777777777766543 4688888743 3334444455666664 3321111 01222
Q ss_pred hHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 266 ~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
...-++....++...+.++.+.|..... ..+.+.++++.
T Consensus 119 --~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (311)
T 3h5d_A 119 --QEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH 161 (311)
T ss_dssp --HHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred --HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 2233444445666678899888864211 12566666643
No 218
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=27.06 E-value=2.2e+02 Score=25.82 Aligned_cols=139 Identities=11% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCCChhhHHHHHHHHHhC--CcEEEecccCCCCCCHHHHHHHHHHHhcccceeeeeeeeee---cCChhhHHHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAG--GTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWDEVVSDEMEVMVKE 194 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~--GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 194 (538)
...+.+++......+..+ |+-+++-. |.. .....+.+...+.. .+.+....+++ ...+....+.+... +
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~--p~~--v~~a~~~L~~~g~~-~v~v~tVigFP~G~~~~~~Kv~E~~~Av-~ 96 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY--PRF--IPIARKTLKEQGTP-EIRIATVTNFPHGNDDIDIALAETRAAI-A 96 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC--GGG--HHHHHHHHHHTTCT-TSEEEEEESTTTCCSCHHHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC--HHH--HHHHHHHhhhcCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHH-H
Confidence 456788888888888888 99999833 211 22222222211210 12222111221 22334556777766 7
Q ss_pred cCCcEEEEEeeeC----CCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHH
Q 009282 195 KGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (538)
Q Consensus 195 ~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 270 (538)
.|++.+.+.++.. +.+..-.+++.++.++++.++.++-+=.++.... +.+
T Consensus 97 ~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~--------------------------d~e 150 (260)
T 1p1x_A 97 YGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELK--------------------------DEA 150 (260)
T ss_dssp HTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHC--------------------------SHH
T ss_pred cCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCC--------------------------cHH
Confidence 8999998877642 3333346777788888887777655545543210 012
Q ss_pred HHHHHHHHHHHcCCCEEEEe
Q 009282 271 ATTRAIRLAEFVNTPLYVVH 290 (538)
Q Consensus 271 ~i~~~l~~~~~~~~~~~~~h 290 (538)
.+..+.+++.+.|..++=+-
T Consensus 151 ~i~~a~~ia~eaGADfVKTS 170 (260)
T 1p1x_A 151 LIRKASEISIKAGADFIKTS 170 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeC
Confidence 25677778888888776543
No 219
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.71 E-value=3.7e+02 Score=24.58 Aligned_cols=120 Identities=13% Similarity=0.014 Sum_probs=64.4
Q ss_pred hHHHHHHHHHH-cCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcc
Q 009282 184 VSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPE 257 (538)
Q Consensus 184 ~~~~~~~~~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~ 257 (538)
.++.+.+..-+ .|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavl 104 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLS 104 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 33333333336 78888755433333456787777777766543 35788888843 33344455566677776432
Q ss_pred cccc--cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 258 GHAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 258 ~~~~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
--.+ ..|. ...-.+....++...+.++++.+..... ..+.+.++++
T Consensus 105 v~~P~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 105 AVTPFYYKFS--FPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp EECCCSSCCC--HHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred ECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 1111 1222 2223334445566667898888753211 1256666654
No 220
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=26.67 E-value=3.2e+02 Score=24.99 Aligned_cols=110 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|.....--.+ ..|.
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s- 111 (291)
T 3a5f_A 33 KSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTT- 111 (291)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-
Confidence 678888755433333456777777777766543 25788888843 333444455566677654321110 1121
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-.+....++...+.++++.+..... ..+.+.++++
T Consensus 112 -~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 112 -QKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE 153 (291)
T ss_dssp -HHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 1122223333455567788887753211 1255655653
No 221
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.49 E-value=3.9e+02 Score=24.69 Aligned_cols=109 Identities=17% Similarity=0.108 Sum_probs=58.3
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|.....--.+ ..|.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s- 122 (306)
T 1o5k_A 44 ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPT- 122 (306)
T ss_dssp HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCC-
Confidence 678888755333333456677777777666543 25788888843 333444455566677654321111 1222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKAR 304 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~ 304 (538)
...-.+....++...+.++++.+..... ..+.+.+++
T Consensus 123 -~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 123 -QEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp -HHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 2222334444566667888888753211 125666665
No 222
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=26.47 E-value=3.8e+02 Score=24.57 Aligned_cols=118 Identities=6% Similarity=-0.032 Sum_probs=64.3
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccc
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN--GDAVFEGQKRMIELGITGPEGH 259 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~ 259 (538)
++.+.+..-+.|++++-+.-.......++.++-.++++.+.+. ..++.+++.. ..+.-+..+.+.+.|..+..--
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3333333336788887553333334567888888888776543 4678888843 3344445556667776543211
Q ss_pred cc--cC-CchHHHHHHHHHHHHHHHc---CCCEEEEeccCHH----HHHHHHHHH
Q 009282 260 AL--SR-PPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMD----AMEEIAKAR 304 (538)
Q Consensus 260 ~~--~~-~~~~~~~~i~~~l~~~~~~---~~~~~~~h~~~~~----~~~~i~~~~ 304 (538)
.+ .. |. ...-++....++... +.++++.+..... ..+.+.+++
T Consensus 106 ~P~y~~~~s--~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 106 PPSYFKNVS--DDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp CCCSSCSCC--HHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred CCcCCCCCC--HHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 11 12 22 223334444556666 7899888853211 125666665
No 223
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.45 E-value=3.8e+02 Score=24.56 Aligned_cols=111 Identities=8% Similarity=-0.072 Sum_probs=0.0
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC--CHHHHHHHHHHHhcccceeeeeeeeeecCChhhHHHHHHHHHHcCC
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGI 197 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 197 (538)
+..+.+.+.......+.+||..++-.+..+.. ...+......+......-. -+.+.......+..+..+... +.|+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~-~~Ga 92 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSK-DFDI 92 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGG-GSCC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHH-hcCC
Q ss_pred cEEEEEeeeCCC-ccCCHHHHHHHHHH-HHhcCCeEEEE
Q 009282 198 NSFKFFMAYKGS-FMINDELLIEGFKR-CKSLGALAMVH 234 (538)
Q Consensus 198 ~~ik~~~~~~~~-~~~~~~~l~~~~~~-A~~~g~~v~~H 234 (538)
+++-+..-+... + +.+.+.+.++. |...++++..+
T Consensus 93 davlv~~P~y~~~~--s~~~l~~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 93 VGIASYAPYYYPRM--SEKHLVKYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp SEEEEECCCSCSSC--CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CEEEEcCCCCCCCC--CHHHHHHHHHHHHhhCCCCEEEE
No 224
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=26.26 E-value=3.8e+02 Score=24.58 Aligned_cols=120 Identities=10% Similarity=-0.010 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEG 258 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~ 258 (538)
.++.+.+..-+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|.....-
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLC 101 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 3333333333678888754333233456787777777766543 25788888843 333444555666777654321
Q ss_pred ccc--cCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHH
Q 009282 259 HAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 259 ~~~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
-.+ ..| ....-++....++...+.++++.+..... ..+.+.++++
T Consensus 102 ~~P~y~~~--s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 102 VAGYYNRP--SQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp CCCTTTCC--CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred cCCCCCCC--CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 111 122 22233344445666778899888754221 1266666664
No 225
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=25.53 E-value=3.1e+02 Score=25.64 Aligned_cols=97 Identities=11% Similarity=0.016 Sum_probs=54.3
Q ss_pred hhhHHHHHHHHHHcCCcEEEEEeee--CCCccCC-HHHHHHH---HHHHHhc--CCeEEEEcCChhhHHHHHHHHHHcCC
Q 009282 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSFMIN-DELLIEG---FKRCKSL--GALAMVHAENGDAVFEGQKRMIELGI 253 (538)
Q Consensus 182 ~~~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~-~~~l~~~---~~~A~~~--g~~v~~H~~~~~~~~~~~~~~~~~g~ 253 (538)
+..++...++. +.|++.+.+.... +| ...+ .++++++ ++..++. +.++.+.......++..++. |.
T Consensus 65 ~~a~~~A~~~v-~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl~a----Ga 138 (318)
T 2vp8_A 65 AAARDAVHRAV-ADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAA----GA 138 (318)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHH----TC
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHh----CC
Confidence 34555666666 7899988775432 33 2333 6667666 4444443 88999988887655555543 54
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHcCCCEEEEecc
Q 009282 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (538)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~ 292 (538)
.-.-.-... ...+++.++.+.+..+++.|..
T Consensus 139 ~iINDVsg~--------~d~~m~~vaa~~g~~vVlmh~~ 169 (318)
T 2vp8_A 139 DLINDTWGG--------VDPAMPEVAAEFGAGLVCAHTG 169 (318)
T ss_dssp CEEEETTSS--------SSTTHHHHHHHHTCEEEEECC-
T ss_pred CEEEECCCC--------CchHHHHHHHHhCCCEEEECCC
Confidence 311000000 0235566778889999999963
No 226
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=25.49 E-value=4.4e+02 Score=25.06 Aligned_cols=109 Identities=11% Similarity=-0.051 Sum_probs=60.7
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.+. ......+..+..+...
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---g~~st~eai~la~~A~ 151 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---GSNSTREAIHATEQGF 151 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---CCCCHHHHHHHHHHHH
Confidence 45567777777888899999998876544332 222 2233333322 222222221 1223344444444443
Q ss_pred HHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEc
Q 009282 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~ 235 (538)
+.|++++-+..-+. ...+.+.+.+.++...+. .++..+-
T Consensus 152 -~~Gadavlvv~PyY--~k~sq~gl~~hf~~IA~a-~PiilYN 190 (360)
T 4dpp_A 152 -AVGMHAALHINPYY--GKTSIEGLIAHFQSVLHM-GPTIIYN 190 (360)
T ss_dssp -HTTCSEEEEECCCS--SCCCHHHHHHHHHTTGGG-SCEEEEE
T ss_pred -HcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHh-CCEEEEe
Confidence 78999987654332 234778888777654443 5877764
No 227
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=25.15 E-value=4.1e+02 Score=24.49 Aligned_cols=110 Identities=8% Similarity=0.021 Sum_probs=57.8
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHh---cCCeEEEEcCC--hhhHHHHHHHHHHcCCCCcccccc--cCCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~---~g~~v~~H~~~--~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+ ...++.+++.. ..+.-+..+.+.+.|..+..--.+ ..|.
T Consensus 43 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s- 121 (303)
T 2wkj_A 43 QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFS- 121 (303)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC-
T ss_pred HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCC-
Confidence 678887754332223455677777777665543 35788888843 333444455566677654321111 1222
Q ss_pred HHHHHHHHHHHHHHHcC-CCEEEEeccCHH----HHHHHHHHHH
Q 009282 267 LEGEATTRAIRLAEFVN-TPLYVVHVMSMD----AMEEIAKARK 305 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~-~~~~~~h~~~~~----~~~~i~~~~~ 305 (538)
...-.+....++...+ .++++.+..... ..+.+.++++
T Consensus 122 -~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 122 -FEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp -HHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 2222333334555566 888888753211 1256666654
No 228
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=24.80 E-value=3.1e+02 Score=25.67 Aligned_cols=50 Identities=10% Similarity=0.162 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCcEEEEEeee-CCC------cc--CCHHHHHHHHHHHHhcCCeEEEEcCC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAY-KGS------FM--INDELLIEGFKRCKSLGALAMVHAEN 237 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~-~~~------~~--~~~~~l~~~~~~A~~~g~~v~~H~~~ 237 (538)
.++..+..++.|++.+.+.... ||. +. ++.+.|+++-+ +.+.+++.|-..
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~---~~~vpLVlHGgS 213 (323)
T 2isw_A 155 PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISD---LTGIPLVMHGSS 213 (323)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHH---HHCSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHH---HhCCCeEEECCC
Confidence 4556666667899988765542 333 33 55667766643 338999999744
No 229
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=24.74 E-value=4.2e+02 Score=24.57 Aligned_cols=125 Identities=10% Similarity=-0.016 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHcCCcEEEEEeee--CCCccCCHHHHHHHHHHHHh-cCCeEEE-EcCChhhHHHHHHHHHHcCCC--Ccc
Q 009282 184 VSDEMEVMVKEKGINSFKFFMAY--KGSFMINDELLIEGFKRCKS-LGALAMV-HAENGDAVFEGQKRMIELGIT--GPE 257 (538)
Q Consensus 184 ~~~~~~~~~~~~g~~~ik~~~~~--~~~~~~~~~~l~~~~~~A~~-~g~~v~~-H~~~~~~~~~~~~~~~~~g~~--~~~ 257 (538)
..+..+++. +.|++.+.+-... ++....+.++..++++...+ .+.++.+ -..+.+.-.+.++...+.|.. ...
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iI 154 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLL 154 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEE
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEE
Confidence 344455555 7899998876532 33334566666667666554 4999999 774444444555555555542 110
Q ss_pred cccccCCchHHHHHHHHHHHHHHHcCCCEEEEeccCHH-HHHHHHHHHHcCC---cEEEeccc
Q 009282 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQ---RVIGEPVV 316 (538)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~h~~~~~-~~~~i~~~~~~g~---~v~~~~~~ 316 (538)
-- .. .....+++.++..++.++++.|..... ..+.++.+.+.|+ .++.+|..
T Consensus 155 Nd--vs-----~~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg~ 210 (310)
T 2h9a_B 155 SS--AT-----KDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPLI 210 (310)
T ss_dssp EE--EC-----TTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCC
T ss_pred EE--CC-----CCccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCCC
Confidence 00 00 012456777888899999999974322 2355666777887 36666654
No 230
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=24.55 E-value=4.1e+02 Score=24.30 Aligned_cols=110 Identities=8% Similarity=-0.071 Sum_probs=62.0
Q ss_pred CCCChhhHHHHHHHHHh-CCcEEEecccCCCCC---CH---HHHHHHHHHHhc-ccceeeeeeeeeecCChhhHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVM 191 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~-~GvTt~~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (538)
+..+.+.+.......+. +||..++-.+..+.. .. .+.++...+... +..+-.|. ......+..+..+..
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---g~~~t~~ai~la~~a 95 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---GSVNLKEAVELGKYA 95 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---CCSCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---CCCCHHHHHHHHHHH
Confidence 45667777777888899 999998766543322 22 222333333322 22222221 122234444444444
Q ss_pred HHHcCCcEEEEEeeeCCCccCCHHHHHHHHHH-HHhcCCeEEEEc
Q 009282 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSLGALAMVHA 235 (538)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-A~~~g~~v~~H~ 235 (538)
. +.|++++-+..-+. ...+.+.+.+.++. |...++++..+-
T Consensus 96 ~-~~Gadavlv~~P~y--~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 96 T-ELGYDCLSAVTPFY--YKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp H-HHTCSEEEEECCCS--SCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred H-hcCCCEEEECCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3 78999987654332 33467777777654 666789998875
No 231
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=23.66 E-value=37 Score=30.69 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=24.5
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
++|.|+|...+ .|..++++ ..+.+.+.|++.+.
T Consensus 21 ~~DlH~Ht~~S-Dg~~t~ee---~v~~A~~~Gl~~i~ 53 (255)
T 2anu_A 21 LCDFHVHTNMS-DGHLPLGE---VVDLFGKHGVDVVS 53 (255)
T ss_dssp EEEEEECCTTT-TCSSCHHH---HHHHHHHTTCSEEE
T ss_pred EEEEeecCCCc-CCCCCHHH---HHHHHHHCCCCEEE
Confidence 69999999766 44455554 47888889998765
No 232
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=23.36 E-value=2.1e+02 Score=25.82 Aligned_cols=107 Identities=13% Similarity=0.170 Sum_probs=61.3
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHHHcCCCCcccccccCCchHHHHHHH
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 273 (538)
..|++.+-+... ..+.++++.+++.|++.|+.+.+-+.+..+....++ .|..- .|-.+......+ -++.
T Consensus 124 ~~GADaILLI~a-----~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~----~~a~i-IGINNRnL~tf~-vdl~ 192 (258)
T 4a29_A 124 NLGADTVLLIVK-----ILTERELESLLEYARSYGMEPLILINDENDLDIALR----IGARF-IGIMSRDFETGE-INKE 192 (258)
T ss_dssp HHTCSEEEEEGG-----GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH----TTCSE-EEECSBCTTTCC-BCHH
T ss_pred HcCCCeeehHHh-----hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhc----CCCcE-EEEeCCCccccc-cCHH
Confidence 679999987654 468899999999999999988888887766544443 33221 111111111010 1234
Q ss_pred HHHHHHHHcCCCEEEEeccCHHHHHHHHHHHHcCCcEE
Q 009282 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVI 311 (538)
Q Consensus 274 ~~l~~~~~~~~~~~~~h~~~~~~~~~i~~~~~~g~~v~ 311 (538)
...++...........-.+.....+.+..+++.|+.-+
T Consensus 193 ~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 193 NQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp HHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEE
Confidence 44555555433332222222222367788888887643
No 233
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=22.90 E-value=1.2e+02 Score=28.34 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=25.5
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHhCCcEEEe
Q 009282 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (538)
Q Consensus 107 lID~H~H~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~ 143 (538)
++|.|+|...+ .|..+++.+ ...+.+.|+..+.
T Consensus 14 ~~DLH~Hs~~S-DG~~~~~el---v~~A~~~Gl~~ia 46 (301)
T 3o0f_A 14 GWDIHCHTVFS-DGTETPRTL---VEQARKLGLHGVA 46 (301)
T ss_dssp SEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEE
T ss_pred eEEeeECCCCC-CCCCCHHHH---HHHHHHcCCCEEE
Confidence 68999999776 455566654 7788899998776
No 234
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=22.82 E-value=4.1e+02 Score=23.75 Aligned_cols=87 Identities=11% Similarity=0.020 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhcCCeEEE-EcCChhhHHHHHHHHHHcCCCCcccccccC
Q 009282 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV-HAENGDAVFEGQKRMIELGITGPEGHALSR 263 (538)
Q Consensus 185 ~~~~~~~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~-H~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (538)
..+.-+.+++.|.+.+.+.... ....+.+.++++.+.++++|+.+.. |...... .+.... ..
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~-----------~l~~~d----~~ 81 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASP--LPFYSDIQINELKACAHGNGITLTVGHGPSAEQ-----------NLSSPD----PD 81 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTT--GGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGG-----------CTTCSC----HH
T ss_pred HHHHHHHHHHcCCCEEEecCcc--cCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCc-----------CCCCCC----HH
Confidence 3344444448899999886432 2335788899999999999999998 5432110 000000 00
Q ss_pred CchHHHHHHHHHHHHHHHcCCCEEE
Q 009282 264 PPLLEGEATTRAIRLAEFVNTPLYV 288 (538)
Q Consensus 264 ~~~~~~~~i~~~l~~~~~~~~~~~~ 288 (538)
......+.+.+.++.+..+|.+.+.
T Consensus 82 ~r~~~~~~~~~~i~~a~~lG~~~v~ 106 (294)
T 3vni_A 82 IRKNAKAFYTDLLKRLYKLDVHLIG 106 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeee
Confidence 0011235677888888888888764
No 235
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=21.96 E-value=4.7e+02 Score=24.09 Aligned_cols=113 Identities=11% Similarity=0.098 Sum_probs=64.5
Q ss_pred HcCCcEEEEEeeeCCCccCCHHHHHHHHHHHHhc---CCeEEEEcC--ChhhHHHHHHHHHHcCCCCccccccc--CCch
Q 009282 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALS--RPPL 266 (538)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~A~~~---g~~v~~H~~--~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~ 266 (538)
+.|++++-+.-.......++.++-.++++.+.+. +.++.+++. +..+.-+..+.+.+.|.....--.+. .+..
T Consensus 46 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 125 (307)
T 3s5o_A 46 TFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRM 125 (307)
T ss_dssp TSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGC
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCC
Confidence 5788887554333334667888888888777653 578888883 33444455556677777543211111 0001
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeccCHH----HHHHHHHHHHc
Q 009282 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARKA 306 (538)
Q Consensus 267 ~~~~~i~~~l~~~~~~~~~~~~~h~~~~~----~~~~i~~~~~~ 306 (538)
....-++....++...+.++++.+..... ..+.+.++++.
T Consensus 126 s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 169 (307)
T 3s5o_A 126 SSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH 169 (307)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC
Confidence 22233444445666778899888864221 12566666643
No 236
>3fy3_A Hemolysin; beta helix, solenoid, two partner secretion, cell membrane, cell outer membrane, cytolysis, hemolysis, membra; 1.80A {Proteus mirabilis}
Probab=21.71 E-value=1.3e+02 Score=26.74 Aligned_cols=50 Identities=24% Similarity=0.368 Sum_probs=35.2
Q ss_pred ccccc-CCCccEEEEcCCCceeeccCcccCCCCCCccCCeEEeeEEEEEEECCEEEEECCeeeccC
Q 009282 434 GAILV-GSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVP 498 (538)
Q Consensus 434 GsI~~-Gk~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~V~v~G~~V~~~~~~~~~~ 498 (538)
|.+|+ |++||+|+-+++=. ...|-.+...-+.+..=|++.+++|.+...+
T Consensus 94 G~lEVaG~~AdvIiANPnGI---------------tcnGcgFiNt~~~TLtTG~p~~~~G~l~~~~ 144 (236)
T 3fy3_A 94 GQQEVFGIAAEYVLSNPNGI---------------TCDGCGFINTSRSSLVVGNPLFENGQLKGYS 144 (236)
T ss_dssp SEEEEEESCEEEEEECTTCE---------------EESSEEEESEEEEEEESSEEEEETTEEEEEE
T ss_pred cEEEEcCCCCCEEEECCCCE---------------EEeCcEEEccCCeEEEEeeEEecCCceeEEE
Confidence 55664 89999999987643 2333333445666888999999999887554
No 237
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=20.90 E-value=5e+02 Score=23.99 Aligned_cols=110 Identities=15% Similarity=-0.010 Sum_probs=61.1
Q ss_pred CCCChhhHHHHHHHHHhCCcEEEecccCCCCC---CHH---HHHHHHHHHh-cccceeeeeeeeeecCChhhHHHHHHHH
Q 009282 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (538)
Q Consensus 120 ~~~~~~~~~~~~~~~l~~GvTt~~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (538)
+..+.+.+.......+.+||..++-.+..+.. ... +.++...+.. .+..+-.|. ......+..+..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---g~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---GTNDTRDSIEFVKEVA 99 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---CCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---CCcCHHHHHHHHHHHH
Confidence 44566777777888899999988866544332 222 2333333332 122222221 1222334444444433
Q ss_pred HHcCC-cEEEEEeeeCCCccCCHHHHHHHHH-HHHhcCCeEEEEc
Q 009282 193 KEKGI-NSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (538)
Q Consensus 193 ~~~g~-~~ik~~~~~~~~~~~~~~~l~~~~~-~A~~~g~~v~~H~ 235 (538)
+.|. +++-+..-+. ...+.+.+.+.++ .|...++++..+-
T Consensus 100 -~~Ga~davlv~~P~y--~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 100 -EFGGFAAGLAIVPYY--NKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp -HSCCCSEEEEECCCS--SCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred -hcCCCcEEEEcCCCC--CCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 6676 8886653332 2346777777765 4566799999875
Done!