RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 009282
(538 letters)
>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 334
Score = 244 bits (624), Expect = 3e-77
Identities = 162/333 (48%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163
PGGID +T+L G + DDFF G AALAGGTTM ID V+P G SL FE + +
Sbjct: 1 PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEA 60
Query: 164 AKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
A SC DY H+ IT W + V +E+EV+V++KG+NSF+ +MAYK + ++D L E F
Sbjct: 61 ADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFT 120
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
K LGA+ +VHAENGD + + QKR++E+GITGPEGHALSRP LE EA RAI +A +
Sbjct: 121 FLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRI 180
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342
N P+Y+ VMS A + IA ARK G V GEP+ + L D + W ++ AA +V SPP
Sbjct: 181 NCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPP 240
Query: 343 IRASGHNKALQAALAT-GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401
+ +L G LQ+ G+ HC +++ QKA G D+F IP GVNGIEERM +VW
Sbjct: 241 LSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVW 300
Query: 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
D V +G++ +V +TST A+IFN+YPRKG
Sbjct: 301 DKAVATGKMDENQFVAVTSTNAAKIFNLYPRKG 333
>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2
{Dictyostelium discoideum [TaxId: 44689]}
Length = 334
Score = 244 bits (623), Expect = 4e-77
Identities = 189/333 (56%), Positives = 238/333 (71%), Gaps = 3/333 (0%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163
PGGID HTH + FMG+ ++DDF G AA+AGGTT IDFVIP G SL ++ ++K
Sbjct: 1 PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKW 60
Query: 164 A-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
A + DY H+AIT W E VS EME++VKE+G+NSFK FMAYK SFM+ D+ + FK
Sbjct: 61 ADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNSFMVTDQEMYHIFK 120
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
RCK LGA+A VHAENGD VFEGQK+M+E+GITGPEGH LSRP LE EAT RAI +A+ V
Sbjct: 121 RCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSV 180
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342
TP+Y+VHV S+ A + I K RK G RV GEP+ +GL +D S +W+ D+ AA +VM PP
Sbjct: 181 CTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPP 240
Query: 343 IRASGHNKALQAA-LATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401
IR K + LA G L VGTD+C F + QKA G DDF KIPNGVNG+E+RM +VW
Sbjct: 241 IRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVW 300
Query: 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
+ V +G+++ +VR TS+E ARIFN+YPRKG
Sbjct: 301 ENGVNTGKLTWCQFVRATSSERARIFNIYPRKG 333
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId:
301298]}
Length = 332
Score = 229 bits (584), Expect = 2e-71
Identities = 152/332 (45%), Positives = 204/332 (61%), Gaps = 4/332 (1%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA 164
GGIDPHTHL M F G+ T DDFF+G AA GGTT +DF + G SL + + +KA
Sbjct: 1 GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESLKSAIATWHEKA 60
Query: 165 K-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
+ + +DYGFH+ I + ++ V +E+E ++ +GI S K FMAYK F +DE L + +
Sbjct: 61 RGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYKNVFQADDETLFKTLVK 120
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
K LGAL VHAENGD + K+ + G T P HA +RPP EGEAT RAI L
Sbjct: 121 AKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALAG 180
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343
+ LYVVHV A++ IA+AR+ G V GE L LD S + DF AKYV SPP+
Sbjct: 181 SQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQYLALDVSIMDQPDF-EGAKYVWSPPL 239
Query: 344 RASGHNKALQAALATGILQLVGTDHCAFN-STQKAFGIDDFRKIPNGVNGIEERMHLVWD 402
R + + L +AL GILQ VG+DHC FN QK G DF KIPNG IE+R+ +++
Sbjct: 240 REKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRLTILYS 299
Query: 403 TMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
V G+IS+ +V ++ST+ A++F ++PRKG
Sbjct: 300 EGVRQGRISLNQFVDISSTKAAKLFGMFPRKG 331
>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2
{Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Length = 384
Score = 216 bits (551), Expect = 7e-66
Identities = 107/385 (27%), Positives = 171/385 (44%), Gaps = 56/385 (14%)
Query: 106 GGIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDF-----VIPINGSLTAGFE- 158
GGID H H+ + + +D +A+AGGTT + F +L +
Sbjct: 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKL 60
Query: 159 -AYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM-------VKEKGINSFKFFMAYKGSF 210
E + DYG H+ + + ++ + E++ + G++S K FM Y
Sbjct: 61 DVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYP-GL 119
Query: 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGE 270
I+D ++ + G M+HAENGD V + + E G+T H +SRP ++EGE
Sbjct: 120 QISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGE 179
Query: 271 ATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330
AT RAI LA ++TP+ VHV S A E I +A+ G +V E +L D+
Sbjct: 180 ATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHH 239
Query: 331 FVT--------------------------AAKYVMSPPIRASGHNKALQAALATGILQLV 364
+KY+ SPPIR G K++ + G +V
Sbjct: 240 HGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIV 299
Query: 365 GTDHCAFNSTQKAFGID-------------DFRKIPNGVNGIEERMHLVWDTMVESGQI- 410
G+DHC++N +K +FR IPNG+ G+ RM L++D G +
Sbjct: 300 GSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLT 359
Query: 411 SVTDYVRLTSTECARIFNVYPRKGA 435
S+ V + T A+++ +YP+KG+
Sbjct: 360 SMMKLVEIQCTNPAKVYGMYPQKGS 384
>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii
[TaxId: 329]}
Length = 330
Score = 214 bits (546), Expect = 9e-66
Identities = 135/332 (40%), Positives = 193/332 (58%), Gaps = 6/332 (1%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA 164
GGID HTH+ +++ D F + AA GGTT +DF G SL ++ A
Sbjct: 1 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMA 60
Query: 165 K-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
S +DYG+H+ + + V +E+EV+ + GI SFK FMAY+G MI+D L++ +
Sbjct: 61 GGKSAIDYGYHIIVLDPTDSVIEELEVL-PDLGITSFKVFMAYRGMNMIDDVTLLKTLDK 119
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
G+L MVHAENGDA + + + G T P HALSRPP +E EAT RA+ LAE VN
Sbjct: 120 AVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVN 179
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343
P+Y+VHV +++EE+ +A+ G R + E L L L DF AKYV +PP
Sbjct: 180 APIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPA 238
Query: 344 RASGHNKALQAALATGILQLVGTDHCAFN-STQKAFGIDDFRKIPNGVNGIEERMHLVWD 402
RA + L AL G+ + V +DHC++ K G +DFR IPNG G+EER+ +V+
Sbjct: 239 RAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVY- 297
Query: 403 TMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
V G+IS+T +V L +T A++F ++P+KG
Sbjct: 298 QGVNEGRISLTQFVELVATRPAKVFGMFPQKG 329
>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId:
275]}
Length = 335
Score = 208 bits (530), Expect = 2e-63
Identities = 125/336 (37%), Positives = 188/336 (55%), Gaps = 4/336 (1%)
Query: 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK- 165
IDPH H+ + FM + D +G AAL GGTT +I+ P G++ ++ KA+
Sbjct: 2 IDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEG 61
Query: 166 NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225
NS DY FHMA++K+DE ++ +V GI+SFK F++YK F ++D + + + K
Sbjct: 62 NSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGVDDGEMYQTLRLAK 120
Query: 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285
LG + H EN + V Q++++ G TGPE H SRP +E E T R E
Sbjct: 121 ELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGAT 180
Query: 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA 345
YVVH+ A++ A+ G + E V+ +LD ++ A KY+MSPP+R
Sbjct: 181 GYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGV-EAMKYIMSPPLRD 239
Query: 346 SGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405
+ K L ALA G + VGTDHC F++ QK G + F IPNG+ IE+R++L++ V
Sbjct: 240 KRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGV 299
Query: 406 ESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSD 441
G++ + +V ST+ A++F ++PRKG I VGSD
Sbjct: 300 SRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSD 335
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens
[TaxId: 43663]}
Length = 325
Score = 170 bits (431), Expect = 4e-49
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 8/331 (2%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFV--IPINGSLTAGFEAYEKK 163
G +D H H+ ++ F +A GG T I+ P +L A E ++
Sbjct: 1 GVVDEHVHI-IDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQA 59
Query: 164 AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
+ +D+ + + +M G S ++D L E F+
Sbjct: 60 GQRLKVDFALYGGGVPGNLPEIRKMHDA-GAVGFKSMMAASVPGMFDAVSDGELFEIFQE 118
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
+ G++ +VHAEN + QK++ G + S+P E EA RA+ L +
Sbjct: 119 IAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAG 178
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343
L V+HV + D +E I +A+ GQ V E L + ++PP+
Sbjct: 179 CRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGP----YMKVAPPV 234
Query: 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403
R++ N L L G++ +G+DH K G D K NG G+E + ++
Sbjct: 235 RSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTN 294
Query: 404 MVESGQISVTDYVRLTSTECARIFNVYPRKG 434
V G++S+ V + + A++F +YP+KG
Sbjct: 295 GVNKGRLSLERLVEVMCEKPAKLFGIYPQKG 325
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex
aeolicus [TaxId: 63363]}
Length = 310
Score = 148 bits (373), Expect = 5e-41
Identities = 70/326 (21%), Positives = 121/326 (37%), Gaps = 21/326 (6%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDF--VIPINGSLTAGFEAYEKK 163
G ID H HL G +D SG A+AGG T + P + T +K
Sbjct: 1 GFIDIHVHLRD--PGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKS 58
Query: 164 AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKR 223
ITK + +KE G +F GS +++ ++ + +
Sbjct: 59 KSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFT----DDGSPVMDSSVMRKALEL 114
Query: 224 CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283
LG M H E+ + +I G SR P E R LA+
Sbjct: 115 ASQLGVPIMDHCED----DKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTG 170
Query: 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343
+++ HV + ++E I ++ G ++ E + L+ + + +S A ++PP+
Sbjct: 171 GHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSG----ANARVNPPL 226
Query: 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403
R AL + GI+ TDH + +K + G+ G++ +
Sbjct: 227 RKKEDRLALIEGVKRGIIDCFATDHAPHQTFEK----ELVEFAMPGIIGLQTALPSAL-E 281
Query: 404 MVESGQISVTDYVRLTSTECARIFNV 429
+ G IS+ + + + ARI V
Sbjct: 282 LYRKGIISLKKLIEMFTINPARIIGV 307
>d2vhla2 c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Bacillus subtilis
[TaxId: 1423]}
Length = 301
Score = 103 bits (256), Expect = 4e-25
Identities = 48/332 (14%), Positives = 81/332 (24%), Gaps = 34/332 (10%)
Query: 106 GGIDPHTHLAMEFMGSE-TIDDFFSGQAAALAGGTTMHIDFVI--PINGSLTAGFEAYEK 162
G ID H H + + + GTT + I A A E
Sbjct: 1 GMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREW 60
Query: 163 KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFK 222
KA G + + ++ + K +D L + ++
Sbjct: 61 KAAEESSLLGAELLGIHLEG------------PFVSPKRAGAQPKEWIRPSDVELFKKWQ 108
Query: 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282
+ + A D FE + + + I GH + LL A A +
Sbjct: 109 QEAGGLIKIVTLAPEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAKAGASHMTHLY 168
Query: 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342
N H +A + + A S
Sbjct: 169 NAMSPFHHREPGVIGTALAHDGFVTELIADG----------IHSHPLAAKLAFLAKGSSK 218
Query: 343 IRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWD 402
+ + + F + G +M+
Sbjct: 219 LILITDSMRAKGLKD---------GVYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGAR 269
Query: 403 TMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
M E S TD +TS A+ ++ RKG
Sbjct: 270 HMREFTNCSWTDIANITSENAAKQLGIFDRKG 301
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related
protein-1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 142
Score = 95.7 bits (238), Expect = 5e-24
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 386 IPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 445
I G I + D +E G I L + R I VGSDAD++
Sbjct: 5 IRGG-RIINDDQSFYADVYLEDGLIKQIG-ENLIVPGGVKTIEANGRMVIIAVGSDADVV 62
Query: 446 IFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 505
I++P+ ITA+SH S ++ N++EG G V I+ G++V+E+ ++V G G++I
Sbjct: 63 IWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGRFIP 122
Query: 506 MRPFN-YLFHGLDKAD 520
+PF +L+ +
Sbjct: 123 RKPFPEHLYQRVRIRS 138
Score = 58.0 bits (140), Expect = 7e-11
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG-GIDPHT 112
++LI+GG ++N ADVY+EDG++ + N+ V VK ++A G+ V+ G D
Sbjct: 2 RLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIIAVGSDADV 61
Query: 113 HL 114
+
Sbjct: 62 VI 63
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine
amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId:
44689]}
Length = 150
Score = 95.5 bits (237), Expect = 7e-24
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 386 IPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADII 445
I NG ++R D +VE+G I + E ++ + + I VG D DI+
Sbjct: 6 IKNGTVVNDDRYF-KSDVLVENGIIKEIS-KNIEPKEGIKVVDATDKLLLIDVGCDGDIV 63
Query: 446 IFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIE 505
I++PN S I+ +HH +D N++EG +V G TI G +VW +++L+ V GSG+++
Sbjct: 64 IWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVP 123
Query: 506 MRPFNYLFHGLDKADAKYLSSLQAPVKR 533
PF +F G+++ D K + L V R
Sbjct: 124 RPPFGPVFDGIEQRD-KVRNELLRKVDR 150
Score = 60.0 bits (145), Expect = 2e-11
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG-GIDP 110
+ ILIK GTVVN +DV VE+GI+ + NI + +KV+DAT K ++ G D
Sbjct: 1 TGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLIDVGCDG 60
Query: 111 HTHLAMEFMGSETIDD---------FFSGQAAALAGGTTMHIDFVIPINGSLT--AGFEA 159
+ D F G TT+ ++ + L+ G
Sbjct: 61 DIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGR 120
Query: 160 YEKKAKNSCMDYGFHMAITKWDEVVSDEME 189
+ + I + D+V ++ +
Sbjct: 121 FVPRPPFG----PVFDGIEQRDKVRNELLR 146
>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE)
{Pseudomonas diminuta [TaxId: 293]}
Length = 331
Score = 95.9 bits (237), Expect = 2e-22
Identities = 45/341 (13%), Positives = 78/341 (22%), Gaps = 39/341 (11%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSG-------------QAAALAGGTTMHIDFVIPINGS 152
G H H+ G F G + A AG T+ I
Sbjct: 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRD 75
Query: 153 LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212
++ E + G + S E + I + +
Sbjct: 76 VSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIK 135
Query: 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEAT 272
+ L A A TG + +GE
Sbjct: 136 VATTGKATPFQELVLKAAARASLA-----------------TGVPVTTHTAASQRDGEQQ 178
Query: 273 TRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332
+ + + H D + + G + + + + + S
Sbjct: 179 AAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASA-- 236
Query: 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392
+ S RA + I LV D S+ +D +G
Sbjct: 237 --LLGIRSWQTRALLIKALIDQGYMKQI--LVSNDWLFGFSSYVTNIMDVMD--RVNPDG 290
Query: 393 IEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRK 433
+ V + E G + +T T AR + R
Sbjct: 291 MAFIPLRVIPFLREKG-VPQETLAGITVTNPARFLSPTLRA 330
>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId:
562]}
Length = 343
Score = 76.2 bits (186), Expect = 1e-15
Identities = 34/374 (9%), Positives = 80/374 (21%), Gaps = 44/374 (11%)
Query: 109 DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDF--VIPINGSLTAGFEAYEKKAKN 166
D H HL M + + I + P + AY ++ +
Sbjct: 11 DWHLHLRDGDMLKTVV--------PYTSEIYGRAIVMPNLAPPVTT-VEAAVAYRQRILD 61
Query: 167 SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS 226
+ + S + + + F Y + N +
Sbjct: 62 AVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSVDAIMP 121
Query: 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286
L + + G+ + +
Sbjct: 122 --VLERMEKIGMPLLVHGEV---------THADIDIFDREARFIESVMEPLRQRLTALKV 170
Query: 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS 346
H+ + DA + + R +R+ L+ + + V Y + R
Sbjct: 171 VFEHITTKDAADYV---RDGNERLAATITPQHLMFNRNH-MLVGGVRPHLYCLPILKRNI 226
Query: 347 GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE 406
+ + +GTD + + G + E
Sbjct: 227 HQQALRELVASGFNRVFLGTDSAPHARHR-----KESSCGCAGCFNAPTALGSYATVFEE 281
Query: 407 SGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLD- 465
++ + S + + + I ++ +
Sbjct: 282 MN--ALQHFEAFCSVNGPQFYGLPVNDT----------FIELVREEQQVAESIALTDDTL 329
Query: 466 TNVYEGRRVKGKVE 479
G V+ V+
Sbjct: 330 VPFLAGETVRWSVK 343
>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp.
[TaxId: 275]}
Length = 123
Score = 68.8 bits (168), Expect = 9e-15
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 437 LVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNV 496
V AD+++++P I+ ++ H D N +EG + G+ V G+V + +
Sbjct: 49 YVFPGADLVVYDPQYRGTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVRDGQFVG 108
Query: 497 VPGSGKYIEMRPFNY 511
G GK + P +
Sbjct: 109 EKGWGKLLRREPMYF 123
Score = 57.3 bits (138), Expect = 8e-11
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHL 114
+LIK G ++ A + AD+Y E + + N+ +V+DATGK+V PG
Sbjct: 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGADLVVYD- 60
Query: 115 AMEFMGSETIDDFFS 129
++ G+ ++
Sbjct: 61 -PQYRGTISVKTQHV 74
>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp.
AR9 [TaxId: 301298]}
Length = 127
Score = 67.3 bits (164), Expect = 3e-14
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 435 AILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 494
I VGSDADI+IF+P+ ++ +HH +D N +EG V G+V ++ G V + +
Sbjct: 51 PIAVGSDADIVIFDPHVKRTLSVETHHMNVDYNPFEGMEVYGEVVSVLSRGSFVVRDKQF 110
Query: 495 NVVPGSGKYIEMRPFN 510
GSG+YI+ F
Sbjct: 111 VGQAGSGQYIKRTTFE 126
Score = 54.6 bits (131), Expect = 8e-10
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
K I+GGTVV A ADV +E VVA+ ++V + +DATG +V+P +
Sbjct: 1 KKWIRGGTVVTAADTYQADVLIEGERVVAIGHQLSVNGA-EEIDATGCYVIPIAVGSDAD 59
Query: 114 LAMEFMG 120
+ +
Sbjct: 60 IVIFDPH 66
>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia
pickettii [TaxId: 329]}
Length = 127
Score = 65.8 bits (160), Expect = 9e-14
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHH 461
D ++ G+I+ + Y I VGSDADI++++P + I + H
Sbjct: 20 DLGIKDGKITQIGGALGPAERTIDAAGRY--VFPIAVGSDADIVLWDPEAEMVIEQTAMH 77
Query: 462 SRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFN 510
+ +D + YEG +VKG + + G+V+ + P GK+++ R +
Sbjct: 78 NAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKRRKYK 126
Score = 43.1 bits (101), Expect = 9e-06
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHL 114
I+IK GT+V A AD+ ++DG + + + + + +DA G++V P + +
Sbjct: 3 IIIKNGTIVTADGISRADLGIKDGKITQIGGALGPAE--RTIDAAGRYVFPIAVGSDADI 60
Query: 115 AM 116
+
Sbjct: 61 VL 62
>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 128
Score = 63.6 bits (154), Expect = 7e-13
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 402 DTMVESGQISVTDYVRLTSTECARIFNVYPRKG----AILVGSDADIIIFNPNSSFEITA 457
+++ G+I + + V KG I+VGSDAD++IF+PN I+A
Sbjct: 20 HLLIKDGKI-----AMIGQNLEEKGAEVIDAKGCYVFPIVVGSDADLVIFDPNIERVISA 74
Query: 458 RSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 509
+HH +D N +EG +V G+ + G V + + PG G+Y++ +
Sbjct: 75 ETHHMAVDYNAFEGMKVTGEPVSVLCRGEFVVRDKQFVGKPGYGQYLKRAKY 126
Score = 49.7 bits (118), Expect = 4e-08
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
+IK GT+V A A + ++DG + + N+ +V+DA G +V P +
Sbjct: 2 TKIIKNGTIVTATDTYEAHLLIKDGKIAMIGQNLE-EKGAEVIDAKGCYVFPIVVGSDAD 60
Query: 114 LAMEFMGSETI 124
L + E +
Sbjct: 61 LVIFDPNIERV 71
>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase
{Escherichia coli [TaxId: 562]}
Length = 105
Score = 61.9 bits (150), Expect = 1e-12
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 13/110 (11%)
Query: 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGI 108
++ L++G + + I DV V +G ++AV NI + V+D +G+ + P +
Sbjct: 6 AAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPEIL 65
Query: 109 DPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFE 158
+ + I+ A G M V + FE
Sbjct: 66 PGNDADLLVMTPELRIEQ-------VYARGKLM----VKDGKACVKGTFE 104
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter
aurescens [TaxId: 43663]}
Length = 126
Score = 62.7 bits (152), Expect = 1e-12
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 430 YPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVW 489
+ VGSDAD++I + + ++ A S + ++G V G +T+ G VV
Sbjct: 50 KFVMPTLQVGSDADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVA 109
Query: 490 ENDELNVVPGSGKYIE 505
E E+ V G G+++
Sbjct: 110 EKGEVLVEQGFGQFVT 125
Score = 50.0 bits (119), Expect = 3e-08
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPG---GIDPH 111
+++K +V++ AD+ V+DG V A+ + + + + +DA GKFVMP G D
Sbjct: 4 VIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPTLQVGSDAD 63
Query: 112 THLA-MEFMGSETIDDFFSGQAAALAGGTTMH 142
+ ++ F S + G +
Sbjct: 64 LLILDLDIDTKVDASQFRSLHKYSPFDGMPVT 95
>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase
{Aquifex aeolicus [TaxId: 63363]}
Length = 112
Score = 62.3 bits (151), Expect = 1e-12
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 385 KIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVY--PRKGAILVGSDA 442
+ + +E ++ + + + A I + + +GS A
Sbjct: 10 YVIDPSQNLEGEFDILVENGK------IKKIDKNILVPEAEIIDAKGLIVCPTLKLGSPA 63
Query: 443 DIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEN 491
DI IF+PN + + ++ S+ G+ +KGKV TI G++V+++
Sbjct: 64 DITIFDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD 112
Score = 33.8 bits (77), Expect = 0.011
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 53 SKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGI 108
K+++K G V++ D+ VE+G + + NI + +++DA G V P
Sbjct: 2 LKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPTLK 58
>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine
amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri)
[TaxId: 4934]}
Length = 156
Score = 63.1 bits (153), Expect = 2e-12
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFV---MPGGID 109
++IK G + A A++ V +G V + +I+ +V+DA G F+ +PG D
Sbjct: 3 YDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPILPGVSD 62
Query: 110 PHTHLAMEF 118
+
Sbjct: 63 ADLVIWYPD 71
Score = 60.8 bits (147), Expect = 1e-11
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 449 PNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 508
+ IT + D +EG +K TI G++V++ E+ GKY++ R
Sbjct: 78 NSKPKLITNKLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLK-RG 136
Query: 509 FNYLFHGLDKADAKY 523
+++ ++ ++
Sbjct: 137 KSFMCTPKNEWVTEW 151
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein
EAJ56179 {Unidentified organism [TaxId: 32644]}
Length = 102
Score = 58.5 bits (141), Expect = 2e-11
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 53 SKILIKGGTVVNAHHQQI---ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGID 109
+ L + G +++ H + ++ +EDG + V + V+D GK +MP +
Sbjct: 1 TTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPRIVP 60
Query: 110 PHTHLAMEFMG 120
+ G
Sbjct: 61 GAHADVLVVDG 71
>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 55
Score = 51.3 bits (123), Expect = 2e-09
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 55 ILIKGGTVVNAHHQQI--ADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMP 105
++ GGTV++ + ADV V + AV + +D GK V P
Sbjct: 4 YILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSP 55
>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic
domain {Escherichia coli [TaxId: 562]}
Length = 284
Score = 55.9 bits (133), Expect = 3e-09
Identities = 41/336 (12%), Positives = 76/336 (22%), Gaps = 59/336 (17%)
Query: 106 GGIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA 164
G ID H HL T + G T +
Sbjct: 1 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG-------------------- 40
Query: 165 KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRC 224
+ T + + + +M + + + K
Sbjct: 41 ----------LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDV 90
Query: 225 KSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284
+ + V D A L A +R L
Sbjct: 91 AIIDRVIGVKCAISDHR----------------SAAPDVYHLANMAAESRVGGLLGGKPG 134
Query: 285 PLYVVHVMSMDAMEEIAKARKAGQRVI-----GEPVVSGLVLDDSWLWHSDFVTAA-KYV 338
S A++ I + I + + + + + T
Sbjct: 135 VTVFHMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSS 194
Query: 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMH 398
+ P+ + A + +D G GV G E +
Sbjct: 195 IDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLT----HIGVAGFETLLE 250
Query: 399 LVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
V +V+ S++D +R ++ A N+ KG
Sbjct: 251 TVQ-VLVKDYDFSISDALRPLTSSVAGFLNL-TGKG 284
>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease
{Klebsiella aerogenes [TaxId: 28451]}
Length = 181
Score = 49.0 bits (117), Expect = 2e-07
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 16/106 (15%)
Query: 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN----------VGDDVKVLDATGKFVM 104
+++ +V+ AD+ V+DG + A+ N +G +V+ A GK V
Sbjct: 67 LVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVT 126
Query: 105 PGGIDPHTH-----LAMEFMGSETIDDFFSGQ-AAALAGGTTMHID 144
G I+ + F G + G A A G I
Sbjct: 127 AGSIEVGKLADLVVWSPAFFGVKPATVIKGGMIAIAPMGDINASIP 172
>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase
{Alteromonas macleodii [TaxId: 28108]}
Length = 96
Score = 46.9 bits (111), Expect = 2e-07
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 53 SKILIKGGTVVNAHHQQI---ADVYVEDGIVVAVQPN-INVGDDVKVLDATGKFVMPGGI 108
SK LI G +++ Q+ + ++ I+ ++ I+ D +D V+P
Sbjct: 1 SKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISSNDFEDYIDLRDHTVLPSIE 60
Query: 109 DPHTHLAMEFMGSETID 125
+ G+ D
Sbjct: 61 SGKLADLIAVKGNPIED 77
>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate
deacetylase, NagA {Escherichia coli [TaxId: 562]}
Length = 85
Score = 40.1 bits (93), Expect = 4e-05
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTH 113
+ G + H V + DG++ +V P + +++ G + P
Sbjct: 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPTLAAGKVA 61
Query: 114 LAMEF-MGSETIDDFFSG 130
F + +G
Sbjct: 62 NLTAFTPDFKITKTIVNG 79
>d2vhla1 b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6-phosphate
deacetylase, NagA {Bacillus subtilis [TaxId: 1423]}
Length = 91
Score = 40.0 bits (93), Expect = 5e-05
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Query: 54 KILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPH 111
+LIK +V + + V + DG + V ++ ++P
Sbjct: 2 SLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPSVTVGK 61
Query: 112 THLAM 116
+
Sbjct: 62 DADLV 66
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453
{Bifidobacterium longum [TaxId: 216816]}
Length = 118
Score = 39.8 bits (92), Expect = 1e-04
Identities = 16/96 (16%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 54 KILIKGGTVV----NAHHQQIADVYVE-DGIVVAV--QPNINVGDDVKVLDATGKFVMPG 106
+ T+V + + V DG + V ++ + LD TGK VM
Sbjct: 5 PFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMLE 64
Query: 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMH 142
L + + + AG
Sbjct: 65 VGKSADLLVLNANPLDDLRALEHPALVIAAGHPVWR 100
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase
{Alcaligenes faecalis [TaxId: 511]}
Length = 61
Score = 33.2 bits (76), Expect = 0.006
Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 11/65 (16%)
Query: 436 ILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELN 495
+ G AD+++F+P + + + + G VWE+
Sbjct: 2 VQPGYYADLVVFDPAT---VADSATFEH-------PTERAAGIHSVYVNGAAVWEDQSFT 51
Query: 496 -VVPG 499
G
Sbjct: 52 GQHAG 56
>d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase
{Bacillus subtilis [TaxId: 1423]}
Length = 113
Score = 34.3 bits (78), Expect = 0.007
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 14/96 (14%)
Query: 395 ERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFE 454
+ + E + E I + R + G AD++I+ +
Sbjct: 31 HVIEDAVVGIHEQKIVFAGQKGAEAGYEADEIIDCSGRLVTLKAGRSADLVIWQAPNYMY 90
Query: 455 ITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWE 490
I + V + G +V
Sbjct: 91 IPYHYGVNH--------------VHQVMKNGTIVVN 112
>d1ueba3 b.40.4.5 (A:127-184) Elongation factor P middle and
C-terminal domains {Thermus thermophilus HB8 [TaxId:
300852]}
Length = 58
Score = 32.2 bits (74), Expect = 0.012
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFV 103
++G TV +E G VV V + G+ +KV TG++V
Sbjct: 13 VRGDTVSGG----SKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYV 55
>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas
macleodii [TaxId: 28108]}
Length = 310
Score = 33.5 bits (74), Expect = 0.048
Identities = 31/281 (11%), Positives = 62/281 (22%), Gaps = 23/281 (8%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAAL-----------AGGTTMHIDFVIPINGSLT 154
G +D H H E+ + A+ +G TT+ +
Sbjct: 1 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISL 60
Query: 155 AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIND 214
K A G +A T ++ V + + +
Sbjct: 61 RDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVR 120
Query: 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274
+ +G K ++ Q E+ +
Sbjct: 121 QRYKDGADGIKITVTGGVLSVAKSGQNP--QFTQEEVDAVVSAAKDYGMWVAVHAHGAEG 178
Query: 275 AIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW--HSDFV 332
R + + M ++AM+ + + G V + + D
Sbjct: 179 MKRAIKAGVDSIEHGTFMDLEAMDLMIEN--------GTYYVPTISAGEFVAEKSKIDNF 230
Query: 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNS 373
+ + A G+ GTD
Sbjct: 231 FPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQKH 271
>d1p1ma1 b.92.1.4 (A:1-49,A:331-404) Hypothetical protein TM0936
{Thermotoga maritima [TaxId: 2336]}
Length = 123
Score = 32.2 bits (73), Expect = 0.053
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 433 KGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWEND 492
I G +AD+++ + + ++ + L G+V T+ G+ ++ +
Sbjct: 48 MPKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHA------FSGEVFATMVAGKWIYFDG 101
Query: 493 EL 494
E
Sbjct: 102 EY 103
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 103
Score = 31.4 bits (71), Expect = 0.055
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 9/96 (9%)
Query: 379 GIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILV 438
+D + N V + + + + R +
Sbjct: 16 AMDGIGAVENAVIAVRNGRIAFAGPE---------SDLPDDLSTADETTDCGGRWITLEA 66
Query: 439 GSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV 474
G AD I++ E+ R + L +++G++V
Sbjct: 67 GKSADFAIWDIERPAELVYRIGFNPLHARIFKGQKV 102
>d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable
4-imidazolone-5-propanoate amidohydrolase GOS_1928421
{Environmental samples}
Length = 103
Score = 31.3 bits (71), Expect = 0.069
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 418 LTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRV 474
L A ++ + + VG AD +++N E++ +L + V G
Sbjct: 45 LKGPYPAHWQDMKGKLVTLRVGMLADFLVWNCGHPAELSYLIGVDQLVSRVVNGEET 101
>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837
{Enterococcus faecalis [TaxId: 1351]}
Length = 267
Score = 32.6 bits (72), Expect = 0.11
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 9/72 (12%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK 165
G ID H H F D+ + G T VI + + A+
Sbjct: 1 GWIDDHVHC---FEKMALYYDYPD--EIGVKKGVTT----VIDAGTTGAENIHEFYDLAQ 51
Query: 166 NSCMDYGFHMAI 177
+ + + I
Sbjct: 52 QAKTNVFGLVNI 63
>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium
acetobutylicum [TaxId: 1488]}
Length = 310
Score = 32.1 bits (71), Expect = 0.15
Identities = 25/177 (14%), Positives = 42/177 (23%), Gaps = 33/177 (18%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFF--------------------------SGQAAALAGG 138
PG D H H + +D + G
Sbjct: 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNG 60
Query: 139 TTMHIDFVIPINGSLTAGFEAYEKKAKNSC-----MDYGFHMAITKWDEVVSDEMEVMVK 193
TT F S F K + MDY +T+ ++ E ++
Sbjct: 61 TTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTENYITSLNDTEEIIL 120
Query: 194 EKGINSF--KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248
+ S K + + ++EL+ K H K +
Sbjct: 121 KYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSL 177
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein
{Escherichia coli [TaxId: 562]}
Length = 291
Score = 31.4 bits (70), Expect = 0.22
Identities = 19/177 (10%), Positives = 47/177 (26%), Gaps = 23/177 (12%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAAL---------AGGTTMHIDFVIPINGSLTAG 156
G H HL ++ G + D Q A + G + + +
Sbjct: 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFM 65
Query: 157 FEAYEKKAKNSCMDYGFH-----------MAITKWDEVVSDEMEVMVKEKGINSF---KF 202
+ + N G++ ++ + + + DE+E + + + +
Sbjct: 66 LDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEI 125
Query: 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259
+ + +++ I G H E + G+
Sbjct: 126 GTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVT 182
>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Thermotoga maritima
[TaxId: 2336]}
Length = 288
Score = 31.0 bits (68), Expect = 0.34
Identities = 36/327 (11%), Positives = 78/327 (23%), Gaps = 40/327 (12%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK 165
G +DPH H + DF + + G T + + + E ++
Sbjct: 1 GFVDPHIHGVVGADTMN--CDFSEMEEFLYSQGVTTFLATTV------STSLEKMKE--- 49
Query: 166 NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225
+ K + + + + + KG+ + +
Sbjct: 50 ----------ILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRPPSERELSE 99
Query: 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285
M+ E R+++ I GH+++ E + + T
Sbjct: 100 IDSPAKMLTFAPEIESSELLLRLVKRDIVLSAGHSIATF-----EEFMKFYKEGVKRITH 154
Query: 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA 345
I A V E + G+ L + + + +
Sbjct: 155 FPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREMV-KLVYKVKKANGIVLVTDS 213
Query: 346 SGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405
G L + D R + G
Sbjct: 214 ISAAGLKDGTTTLGDLVVKVKDGVP-------------RLEDGTLAGSTLFFSQAVKNFR 260
Query: 406 ESGQISVTDYVRLTSTECARIFNVYPR 432
+ S+T+ +++S + R
Sbjct: 261 KFTGCSITELAKVSSYNSCVELGLDDR 287
>d1eu1a2 c.81.1.1 (A:4-625) Dimethylsulfoxide reductase (DMSO
reductase) {Rhodobacter sphaeroides [TaxId: 1063]}
Length = 622
Score = 30.4 bits (67), Expect = 0.57
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 60 GTVVNAHHQQIADVYVEDGIVVAVQPN 86
G V++ H + VE+G VA +P
Sbjct: 3 GEVMSGCHWGVFKARVENGRAVAFEPW 29
>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium
japonicum [TaxId: 375]}
Length = 325
Score = 29.9 bits (65), Expect = 0.68
Identities = 17/110 (15%), Positives = 24/110 (21%), Gaps = 26/110 (23%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFS-------------------------GQAAALAGGT 139
PG ID H HL + + A LA GT
Sbjct: 1 PGFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGT 60
Query: 140 TMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEME 189
T F + FE ++ + E +
Sbjct: 61 TTCQAFTSSSPVATEELFEEASRRNMRVIAGLTG-IDRNAPAEFIDTPEN 109
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain
{Escherichia coli [TaxId: 562]}
Length = 320
Score = 29.5 bits (64), Expect = 1.1
Identities = 47/367 (12%), Positives = 88/367 (23%), Gaps = 80/367 (21%)
Query: 108 IDPHTHLAMEFMGSE-----------------------TIDDFFS----GQAAALAGGTT 140
++PH HL + T DD +A G
Sbjct: 3 VEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQ 62
Query: 141 MHIDFVIPINGSLTA---GFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGI 197
V + +LTA E ++ A + + + G
Sbjct: 63 HVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGA 122
Query: 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257
+ ++ + E L + F + L VH + D +
Sbjct: 123 DVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETV-------- 174
Query: 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM-EEIAKARKAGQRVIGEPVV 316
A + +H + + +G + P+V
Sbjct: 175 -----------AALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLV 223
Query: 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQK 376
+ F T K ++ + GI G D
Sbjct: 224 -------NIHLQGRFDTYPKRRGITRVKEMLES---------GINVCFGHDGVFDPWY-- 265
Query: 377 AFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAI 436
P G + + +H+ G + D + L + AR N+ + I
Sbjct: 266 ----------PLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNL--QDYGI 313
Query: 437 LVGSDAD 443
G+ A+
Sbjct: 314 AAGNSAN 320
>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase
{Unidentified organism [TaxId: 32644]}
Length = 303
Score = 29.2 bits (63), Expect = 1.2
Identities = 34/277 (12%), Positives = 61/277 (22%), Gaps = 21/277 (7%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAA---------ALAGGTTMHIDFVIPINGSLTAG 156
G +D H H+ E S L G T + G
Sbjct: 1 GLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRN----------VG 50
Query: 157 FEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216
Y + ++ G T + + + + +F + +G E
Sbjct: 51 AANYADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEA 110
Query: 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276
K K L A G + T E A+ G
Sbjct: 111 RKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQF--TLEEMKAIVDEAHNHGMKVAAHA 168
Query: 277 RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336
+ + A + + + V D + +
Sbjct: 169 HGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREE 228
Query: 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNS 373
+ + + A G + GTD F+
Sbjct: 229 SLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDH 265
>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 313
Score = 29.0 bits (63), Expect = 1.6
Identities = 16/113 (14%), Positives = 26/113 (23%), Gaps = 26/113 (23%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFF--------------------------SGQAAALAGG 138
PG +D H H + +ID L G
Sbjct: 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNG 60
Query: 139 TTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191
TT F S + +K + + + + E E +
Sbjct: 61 TTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYKETTEESI 113
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Escherichia coli
[TaxId: 562]}
Length = 297
Score = 28.7 bits (62), Expect = 1.8
Identities = 33/347 (9%), Positives = 63/347 (18%), Gaps = 68/347 (19%)
Query: 106 GGIDPHTHLA-----MEFMGSETIDDFFSGQAAALAGGTT-----MHIDFVIPINGSLTA 155
G ID + + + +++ Q A G T + + +
Sbjct: 1 GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRV 60
Query: 156 GFEAYE--------KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207
E + ++ D V + +
Sbjct: 61 MREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAP 120
Query: 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLL 267
+ S G E G L P
Sbjct: 121 EMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAG 180
Query: 268 EGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327
+ +HV + V +G ++
Sbjct: 181 AILDEAD-----IYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFA 235
Query: 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIP 387
+ + G L
Sbjct: 236 GKTI----------------YYRNGLCVDENGTLS------------------------- 254
Query: 388 NGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKG 434
G M +VE I++ + +R+ + AR V R G
Sbjct: 255 ----GSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLG 297
>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824
{Deinococcus radiodurans [TaxId: 1299]}
Length = 308
Score = 28.2 bits (61), Expect = 2.8
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 105 PGGIDPHTHLAMEFMGSE 122
P ++ HTHL M +
Sbjct: 1 PPPVNAHTHLDMSAYEFQ 18
>d1nria_ c.80.1.3 (A:) Hypothetical protein HI0754 {Haemophilus
influenzae [TaxId: 727]}
Length = 248
Score = 27.4 bits (60), Expect = 4.2
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 3/134 (2%)
Query: 135 LAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194
+ GT+ + + T G K + + + E + + ++
Sbjct: 66 IGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEG-AEDNTKAVLNDLQS 124
Query: 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254
+ + S +I G + KSLGAL + A N + + I
Sbjct: 125 IHFSKNDVLVGIAASGRTPY--VIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIV 182
Query: 255 GPEGHALSRPPLLE 268
GPE S
Sbjct: 183 GPEILTGSSRLKSG 196
>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus
subtilis [TaxId: 1423]}
Length = 300
Score = 26.8 bits (57), Expect = 7.1
Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 16/147 (10%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSG---QAAALAGGT-------TMHIDFVIPINGSLT 154
PG +DPHTHL + ++ G GG T + +
Sbjct: 1 PGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHF 60
Query: 155 AGFEAYEKKAKNSCMDYGFHMAIT------KWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208
+ + G+ + + + + + V + + + Y+
Sbjct: 61 HLQRMLSYGTTTAEVKSGYGLEKETELKQLRVAKKLHESQPVDLVSTFMGAHAIPPEYQN 120
Query: 209 SFMINDELLIEGFKRCKSLGALAMVHA 235
+ ++ K +
Sbjct: 121 DPDDFLDQMLSLLPEIKEQELASFADI 147
>d2bo1a1 d.79.3.1 (A:1-100) Eukaryotic ribosomal protein L30 (L30e)
{Archaeon Thermococcus celer [TaxId: 2264]}
Length = 100
Score = 25.5 bits (56), Expect = 7.4
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 294 MDAMEEIAKARKAGQRVIGE 313
+D E+ K +G+ +G
Sbjct: 1 VDIAFELRKVIDSGKYTLGY 20
>d1w3ex1 d.79.3.1 (X:1-98) Eukaryotic ribosomal protein L30 (L30e)
{Archaeon Thermococcus celer [TaxId: 2264]}
Length = 98
Score = 25.5 bits (56), Expect = 7.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 294 MDAMEEIAKARKAGQRVIGE 313
+D E+ KA+ G+ V+G
Sbjct: 1 VDFAFELRKAQDTGKIVMGA 20
>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179
{Unidentified organism [TaxId: 32644]}
Length = 311
Score = 26.6 bits (56), Expect = 8.4
Identities = 29/277 (10%), Positives = 56/277 (20%), Gaps = 13/277 (4%)
Query: 106 GGIDPHTHLAMEFMGSETIDDFFSGQAA---------ALAGGTTMHIDFVIPINGSLTAG 156
G ID H H+ + + L G T D A
Sbjct: 1 GLIDLHVHVVAIEFNLPRVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFKQA- 59
Query: 157 FEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216
G ++ T + M + A DE+
Sbjct: 60 -VESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEV 118
Query: 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAI 276
+ + + A G V + G + E A+ G
Sbjct: 119 RRAVREELQMGADQIKIMASGG--VASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHA 176
Query: 277 RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336
+ + + + V + + D + +
Sbjct: 177 YTPAAIARAVRCGVRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPE 236
Query: 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNS 373
+ +++ G+ GTD
Sbjct: 237 SIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQ 273
>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453
{Bifidobacterium longum [TaxId: 216816]}
Length = 324
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 105 PGGIDPHTHLAMEFMGSETIDDFFSGQ 131
PG I+ HTHL + GQ
Sbjct: 1 PGLINAHTHLFSQGKPLNPKLATPKGQ 27
>d2paja1 b.92.1.4 (A:10-69,A:406-484) Hypothetical protein
GOS_1943094 {Environmental samples}
Length = 139
Score = 25.7 bits (56), Expect = 8.8
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Query: 424 ARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIA 483
I + + VG ADI ++ + V G R V +
Sbjct: 49 ETIVDATDCVIYVAVGYAADIAVYRLDDPRYFGLHDPAIGP---VASGGR--PSVMALFS 103
Query: 484 GGRVVWENDEL 494
G+ V +D +
Sbjct: 104 AGKRVVVDDLI 114
>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094
{Environmental samples}
Length = 336
Score = 26.4 bits (56), Expect = 9.0
Identities = 4/15 (26%), Positives = 7/15 (46%)
Query: 105 PGGIDPHTHLAMEFM 119
P ++ H HL +
Sbjct: 1 PAWVNTHHHLFQSLL 15
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.399
Gapped
Lambda K H
0.267 0.0682 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,046,598
Number of extensions: 99499
Number of successful extensions: 359
Number of sequences better than 10.0: 1
Number of HSP's gapped: 323
Number of HSP's successfully gapped: 77
Length of query: 538
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 448
Effective length of database: 1,171,896
Effective search space: 525009408
Effective search space used: 525009408
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.1 bits)