BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009283
(538 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 227/555 (40%), Gaps = 63/555 (11%)
Query: 24 SPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLIS 82
S R + W V Y P + + INGQFPGP+I A D++++ + N L E +I
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 83 WNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXX 141
W+G+ QR W DG + C I PG+ F Y V D G++FY L
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119
Query: 142 XXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSD--LPFPDGLVINGRG-- 197
PF G+ +L DW+ ++ + L S + P +++NGRG
Sbjct: 120 IVDPPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 198 ---------SNAN-------------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL 235
SN F V KTYR RI++ ++NF I H++L+
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 236 VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTS-QVLSATSVLHY 293
VE +G + +DI+ G+SYSVL+ DQ P + Y++ + TR ++L+Y
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNY 298
Query: 294 XXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQ 353
T D +++++ +TA+ P P + I L
Sbjct: 299 LPNSVSKLPTSPPPQTPAWD-DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLL 350
Query: 354 NTAPTINGKQRYAVNSVSFIPADTP---------LKLADYFKIPGVFSVGSIPDNP---- 400
NT ING ++A+N VS TP L D P VF D P
Sbjct: 351 NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE 410
Query: 401 ---TGGGAY-LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASR 456
G G Y + + A ++ EN +T WH+ GH+F+ +G G+++
Sbjct: 411 KTRIGNGVYQFKIGEVVDVILQNANMMKENLSET-HPWHLHGHDFWVLGYGDGKFSAEEE 469
Query: 457 LTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANS 516
+ NL++ R TV ++P WTA+ DN G+W ++G A
Sbjct: 470 SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF-----AEG 524
Query: 517 WRDEYPIPSNALLCG 531
IP+ AL CG
Sbjct: 525 VEKVGRIPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 120/257 (46%), Gaps = 24/257 (9%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T ++ P G + GIL+NG GP I NDN ++V N LD P + I W+G+
Sbjct: 11 LTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLF 69
Query: 88 QRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FHXXXXXXXXXXXX 144
QR +W DG G N CPI PG F Y G+++Y +
Sbjct: 70 QRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129
Query: 145 SRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG------- 197
+ P + +D + I DWY H +I + PD +ING+G
Sbjct: 130 NDPHAAL-YDEDDENTIITLADWY---HIPAPSIQGAAQ----PDATLINGKGRYVGGPA 181
Query: 198 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 257
+ + V+QGK YR R+ ++ + F I GH++ ++EV+G T +T D L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 258 SYSVLVRADQPPQGYYI 274
YS ++ A+QP Y+I
Sbjct: 242 RYSFVLDANQPVDNYWI 258
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 120/257 (46%), Gaps = 24/257 (9%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T ++ P G + GIL+NG GP I NDN ++V N LD P + I W+G+
Sbjct: 11 LTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLF 69
Query: 88 QRRNSWQDGVYGTN-CPIPPGKNFTYVLQVKDQIGSYFYFPSLA--FHXXXXXXXXXXXX 144
QR +W DG G N CPI PG F Y G+++Y +
Sbjct: 70 QRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129
Query: 145 SRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG------- 197
+ P + +D + I DWY H +I + PD +ING+G
Sbjct: 130 NDPHAAL-YDEDDENTIITLADWY---HIPAPSIQGAAQ----PDATLINGKGRYVGGPA 181
Query: 198 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 257
+ + V+QGK YR R+ ++ + F I GH++ ++EV+G T +T D L I GQ
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241
Query: 258 SYSVLVRADQPPQGYYI 274
YS ++ A+QP Y+I
Sbjct: 242 RYSFVLDANQPVDNYWI 258
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 30 NWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWN 84
+ ++ G + P G +Q IL+N FP P I D ++V + + + I W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 85 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 143
G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQYCDGL 120
Query: 144 XSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVINGR 196
++ P DP A D T++ DWY H K G+ +P D +ING
Sbjct: 121 RGPIVVYDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLINGL 173
Query: 197 GSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 249
G +A T TV +GK YRFR+ ++ + F I GH + ++E + + +T D
Sbjct: 174 GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVD 233
Query: 250 SLDIHLGQSYSVLVRADQPPQGYYI 274
SL I Q YS ++ ADQ Y+I
Sbjct: 234 SLQIFAAQRYSFVLNADQDVDNYWI 258
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 30 NWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWN 84
+ ++ G + P G +Q IL+N FP P I D ++V + + + I W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 85 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 143
G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQYCDGL 120
Query: 144 XSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVINGR 196
++ P DP A D T++ DWY H K G+ +P D +ING
Sbjct: 121 RGPIVVYDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLINGL 173
Query: 197 GSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 249
G +A T TV +GK YRFR+ ++ + F I GH + ++E + + +T D
Sbjct: 174 GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVD 233
Query: 250 SLDIHLGQSYSVLVRADQPPQGYYI 274
SL I Q YS ++ ADQ Y+I
Sbjct: 234 SLQIFAAQRYSFVLNADQDVDNYWI 258
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 119/263 (45%), Gaps = 34/263 (12%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
++ D+ P G + ++ NG FPGP I DN I+V + L + I W+G+
Sbjct: 10 ISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q +W DG + CPI G +F Y V DQ G+++Y L+
Sbjct: 70 QHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLS-------TQYCDGLRG 122
Query: 147 PLIPV-PFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVINGRG- 197
PL+ P DP A D T++ DWY HT K + P D ++ING G
Sbjct: 123 PLVVYDPSDPYASMYDVDDDTTVITLSDWY---HTAAKL---GPAFPPNADSVLINGLGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
S+ TV+Q K YRFR+ ++ + F I GH M ++EV+G + DS+
Sbjct: 177 FAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYI 274
I Q YS ++ A Q Y+I
Sbjct: 237 QIFASQRYSFVLNATQSVDNYWI 259
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 114/259 (44%), Gaps = 22/259 (8%)
Query: 32 NVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGV 86
++ DI P G + + G FPGP I DN I FN L E + I W+G
Sbjct: 10 HIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGE 69
Query: 87 QQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXS 145
Q+ +W DG + T CPI G +F+Y V G+Y+Y H
Sbjct: 70 FQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWY------HSHLTTQYCDGLRG 123
Query: 146 RPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLV---ING 195
++ P DP A D TI+ DWY ++ A +D DGL +N
Sbjct: 124 PFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAITADSTLIDGLGRTHVNV 183
Query: 196 RGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 255
+ TV+ GK YR R+ ++ + +F I GH M ++E +G + + T D + I
Sbjct: 184 AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFA 243
Query: 256 GQSYSVLVRADQPPQGYYI 274
Q YS ++ A+QP Y+I
Sbjct: 244 AQRYSFVLNANQPVGNYWI 262
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T + P G +Q +++NG PGP I D ++V + L + I W+G
Sbjct: 10 ITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q+ +W DG + CPI G +F Y QV DQ G+++Y H
Sbjct: 70 QKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRGS 198
++ P DP A D I DWY H K G P D +ING+G
Sbjct: 124 FVVYDPNDPAADLYDVDNDDTVITLVDWY---HVAAKL----GPAFPLGADATLINGKGR 176
Query: 199 NANTFTVD-------QGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+ +T T D GK YRFR+ ++ + F I GH M ++E + +T DS+
Sbjct: 177 SPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRF 280
I Q YS ++ A+Q Y+I + F
Sbjct: 237 QIFAAQRYSFVLEANQAVDNYWIRANPNF 265
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 116/265 (43%), Gaps = 33/265 (12%)
Query: 30 NWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWN 84
+ ++ G + P G +Q IL+N FP P I D ++V + + + I W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 85 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 143
G Q +W DG + CPI G F Y QV DQ G+++Y H
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWY------HSHLSTQYCDGL 120
Query: 144 XSRPLIPVPFDPPAG------DFTILA-GDWYKKNHTDLKAILDSGSDLPFPDGLVINGR 196
++ P DP D T++ DWY H K GS +P D +ING
Sbjct: 121 RGPIVVYDPQDPHKSLYDVDDDSTVITLADWY---HLAAKV----GSPVPTADATLINGL 173
Query: 197 GSNANTF-------TVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 249
G + +T TV +GK YRFR+ ++ + F I GH + ++E + + T D
Sbjct: 174 GRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVD 233
Query: 250 SLDIHLGQSYSVLVRADQPPQGYYI 274
S+ I Q YS ++ ADQ Y+I
Sbjct: 234 SIQIFAAQRYSFVLNADQDVGNYWI 258
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 154/373 (41%), Gaps = 53/373 (14%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T + P G +Q +++NG PGP + D ++V + L + I W+G
Sbjct: 10 ITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q +W DG + CPI PG +F Y QV DQ G+++Y H
Sbjct: 70 QHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 197
++ P DP A D I DWY HT K G P D +ING+G
Sbjct: 124 FVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGADATLINGKGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+ + V +GK YRFR+ ++ + + F I GH + ++EV+ ++ DS+
Sbjct: 177 APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXXXXXXXXX 308
I Q YS ++ A+Q Y+I + F + +++L Y
Sbjct: 237 QIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRY-------DGAPAVEP 289
Query: 309 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 368
TT S++ + + S P P GS G ++ + N A NG + +N
Sbjct: 290 TTNQTTSVKPLNEVDLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNGSNFF-IN 340
Query: 369 SVSFIPADTPLKL 381
SF+P P+ L
Sbjct: 341 GASFVPPTVPVLL 353
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 154/373 (41%), Gaps = 53/373 (14%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T + P G +Q +++NG PGP + D ++V + L + I W+G
Sbjct: 10 ITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q +W DG + CPI PG +F Y QV DQ G+++Y H
Sbjct: 70 QHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 197
++ P DP A D I DWY HT K G P D +ING+G
Sbjct: 124 FVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPGGADATLINGKGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+ + V +GK YRFR+ ++ + + F I GH + ++EV+ ++ DS+
Sbjct: 177 APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXXXXXXXXX 308
I Q YS ++ A+Q Y+I + F + +++L Y
Sbjct: 237 QIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRY-------DGAPAVEP 289
Query: 309 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 368
TT S++ + + S P P G+ G ++ + N A NG + +N
Sbjct: 290 TTNQTTSVKPLNEVDLHPLVSTPVP---GAPSSGGVD-----KAINMAFNFNGSNFF-IN 340
Query: 369 SVSFIPADTPLKL 381
SF+P P+ L
Sbjct: 341 GASFVPPTVPVLL 353
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 155/373 (41%), Gaps = 53/373 (14%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T P G +Q +++NG PGP + D ++V + L + + W+G
Sbjct: 10 ITDAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q+ +W DG + CPI PG +F Y QV +Q G+++Y H
Sbjct: 70 QQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 197
++ P DP A D I DWY HT K G P D +ING+G
Sbjct: 124 FVVYDPNDPHASRYDVDNDDTVITLADWY---HTAAKL----GPRFPAGADATLINGKGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+ + V +GK RFR+ ++ + F I GH + ++EV+ +++ + DS+
Sbjct: 177 APSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSA---TSVLHYXXXXXXXXXXXXXXX 308
I Q YS ++ A+Q Y+I + F + + +++L Y
Sbjct: 237 QIFAAQRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRY-------DGAPAVEP 289
Query: 309 TTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVN 368
TT S++ + + S P P GS G ++ + N A NG + +N
Sbjct: 290 TTNQTTSVKPLNEVNLHPLVSTPVP---GSPSSGGVD-----KAINMAFNFNGSNFF-IN 340
Query: 369 SVSFIPADTPLKL 381
SF+P P+ L
Sbjct: 341 GASFVPPSVPVLL 353
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 116/268 (43%), Gaps = 32/268 (11%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
VT +I P G ++ I++N FP P I DN +++ N + + I W+G
Sbjct: 10 VTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q+ +W DG + CPI G +F Y QV Q G+++Y H
Sbjct: 70 QKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAGDF-------TILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSN 199
++ P DP A + I DWY L G+D +ING G +
Sbjct: 124 FVVYDPNDPHANLYDVDDESTVITLADWYHV-AAKLGPRFPKGAD-----STLINGLGRS 177
Query: 200 ANTFTVD-------QGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLD 252
+T T D +GK YRFR+ ++ + F I H++ ++E +G T T DS+
Sbjct: 178 TSTPTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQ 237
Query: 253 IHLGQSYSVLVRADQPPQGYYIVISTRF 280
I Q YS ++ A+Q Y+I + F
Sbjct: 238 IFAAQRYSFVLNANQDVDNYWIRANPNF 265
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
V + P G + I++NG FP P I D ++V + L + I W+G
Sbjct: 10 VANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q +W DG + CPI G +F Y V DQ G+++Y H
Sbjct: 70 QAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAGDF-------TILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRGS 198
++ P DP A + I DWY HT + G P D +ING G
Sbjct: 124 FVVYDPKDPHASRYDVDNESTVITLTDWY---HTAARL----GPRFPLGADATLINGLGR 176
Query: 199 NANTFT-------VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+A+T T V GK YRFR+ ++ + F I GH + ++EV+G ++ DS+
Sbjct: 177 SASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRF 280
I Q YS ++ A+Q Y+I + F
Sbjct: 237 QIFAAQRYSFVLNANQTVGNYWIRANPNF 265
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 113/269 (42%), Gaps = 34/269 (12%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T + P G ++ +++NG P P I D ++V + L + I W+G
Sbjct: 10 LTNAQVSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q+ +W DG + CPI G +F Y QV DQ G+++Y H
Sbjct: 70 QQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 197
++ P DP A D I DWY H K G PF D +ING G
Sbjct: 124 FVVYDPNDPHASLYDIDNDDTVITLADWY---HVAAKL----GPRFPFGSDSTLINGLGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
S+ V QGK YRFR+ ++ + F I H M ++E + +T DS+
Sbjct: 177 TTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRF 280
I Q YS ++ A QP Y+I + F
Sbjct: 237 QIFAAQRYSFVLDASQPVDNYWIRANPAF 265
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 33 VTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWNGVQ 87
+T P G +Q +++NG PGP + D ++V + L + + W+G
Sbjct: 10 ITNAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFF 69
Query: 88 QRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSR 146
Q+ +W DG + CPI PG +F Y QV +Q G+++Y H
Sbjct: 70 QQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWY------HSHLSTQYCDGLRGP 123
Query: 147 PLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVINGRG- 197
++ P DP A D TI DWY HT K G P D +ING+G
Sbjct: 124 FVVYDPNDPHASRYDVDNDDTTITLADWY---HTAAKL----GPAFPNGADSTLINGKGR 176
Query: 198 ------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSL 251
+ + +V +GK RFR+ ++ + F I GH ++E + ++ DS+
Sbjct: 177 APSDSSAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSI 236
Query: 252 DIHLGQSYSVLVRADQPPQGYYIVISTRF 280
I Q YS + A+Q Y+I + F
Sbjct: 237 QIFAAQRYSFTLNANQAVDNYWIRANPNF 265
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 38 IYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-ISWNGVQQRRNSWQDG 96
I P G + + NG PGP+I A DNLII V N L+ I W+G++Q + DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 97 VYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLI---PVP 152
V G T CPI PG TY QV Q G+ +Y + PLI P
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFG-------PLIINGPAT 190
Query: 153 FDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGR-------------- 196
D I DW H + I D+ P + ++NG
Sbjct: 191 ADYDEDVGVIFLQDWA---HESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCV 247
Query: 197 -GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 255
G T +G YR R+ NVGI + F I H + ++ + + T D+L I +
Sbjct: 248 GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGI 307
Query: 256 GQSYSVLVRADQPPQGYYIV----ISTRFTSQVLSATSVLHY 293
GQ Y V+V A+ Y+I + ++ +AT +L Y
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRY 349
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 38 IYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-ISWNGVQQRRNSWQDG 96
I P G + + NG PGP+I A DNLII V N L+ I W+G++Q + DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 97 VYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLI---PVP 152
V G T CPI PG TY QV Q G+ +Y + PLI P
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFG-------PLIINGPAT 190
Query: 153 FDPPAGDFTILAGDWYKKNHTDLKAILDSG--SDLPFPDGLVINGR-------------- 196
D I DW H + I D+ P + ++NG
Sbjct: 191 ADYDEDVGVIFLQDWA---HESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCV 247
Query: 197 -GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL 255
G T +G YR R+ NVGI + F I H + ++ + + T D+L I +
Sbjct: 248 GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGI 307
Query: 256 GQSYSVLVRADQPPQGYYIV----ISTRFTSQVLSATSVLHY 293
GQ Y V+V A+ Y+I + ++ +AT +L Y
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRY 349
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 16/245 (6%)
Query: 43 VKQQGILINGQFPGPSIEAVTNDNLIISVFNAL-DEPFLISWNGVQQRRNSWQDGVYG-T 100
VK++ +LING GP+I A D + ++V N L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 101 NCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGD 159
CPIPP G TY + + Q G+ +Y + +P+D G
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGP--ASLPYDIDLGV 169
Query: 160 FTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT-------FTVDQGKTYR 212
F I D+Y + DL + + PF D ++ING N NT T+ GK +R
Sbjct: 170 FPIT--DYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHR 226
Query: 213 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGY 272
RI N + H M ++ + T DSL + +GQ Y V++ A + P Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 273 YIVIS 277
+ ++
Sbjct: 287 WFNVT 291
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 16/245 (6%)
Query: 43 VKQQGILINGQFPGPSIEAVTNDNLIISVFNAL-DEPFLISWNGVQQRRNSWQDGVYG-T 100
VK++ +LING GP+I A D + ++V N L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 101 NCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGD 159
CPIPP G TY + + Q G+ +Y + +P +D G
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLP--YDIDLGV 169
Query: 160 FTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT-------FTVDQGKTYR 212
F I D+Y + DL + + PF D ++ING N NT T+ GK +R
Sbjct: 170 FPIT--DYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHR 226
Query: 213 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGY 272
RI N + H M ++ + T DSL + +GQ Y V++ A + P Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 273 YIVIS 277
+ ++
Sbjct: 287 WFNVT 291
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 16/245 (6%)
Query: 43 VKQQGILINGQFPGPSIEAVTNDNLIISVFNAL-DEPFLISWNGVQQRRNSWQDGVYG-T 100
VK++ +LING GP+I A D + ++V N L I W+G+ Q+ + DG G T
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVT 112
Query: 101 NCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGD 159
CPIPP G TY + + Q G+ +Y + +P+D G
Sbjct: 113 ECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGP--ASLPYDIDLGV 169
Query: 160 FTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT-------FTVDQGKTYR 212
F I D+Y + DL + + PF D ++ING N NT T+ GK +R
Sbjct: 170 FPIT--DYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHR 226
Query: 213 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGY 272
RI N + H M ++ + T DSL + +GQ Y V++ A + P Y
Sbjct: 227 LRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 273 YIVIS 277
+ ++
Sbjct: 287 WFNVT 291
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 180/493 (36%), Gaps = 69/493 (13%)
Query: 29 FNWNVTYGDIYPLGVKQQGIL-INGQFPGPSIEAVTNDNLIISVFNALDEPFL-ISWNGV 86
FNW + G+K + ++ NGQFP P I D + I + N ++ + ++G+
Sbjct: 5 FNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGL 64
Query: 87 QQRRNSWQDGV-YGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXS 145
Q + DGV + T CPI PG Y V +G+Y+Y
Sbjct: 65 FQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKD 124
Query: 146 RPLIPVPFDPPAGDFTILAGDWYKKNHTDLK----AILDSGSDLPFPDGLVINGRGSNAN 201
P +D + ++ +WY TDL ++ + P P L++N +
Sbjct: 125 DSF-PYDYDE---ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL-- 178
Query: 202 TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSV 261
T+ V TY RI NVG S F I+ H+M +VE++G T +N D L I + Q Y+V
Sbjct: 179 TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTV 238
Query: 262 LVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARS 321
LV + ++ +F +L D L
Sbjct: 239 LVHTKNDTDKNFAIMQ-KFDDTMLDVIPS----------------------DLQLNATSY 275
Query: 322 LRRNLTASGPRPNPQGS------------YHYGLI--NTTHTIRLQNTAPTINGKQRYA- 366
+ N TA+ P N S Y I H I + + YA
Sbjct: 276 MVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAF 335
Query: 367 VNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFEN 426
N++++ P + V S G +N G+ T ++ D E+V N
Sbjct: 336 FNNITYTAPKVPTLMT-------VLSSGDQANNSEIYGSNTHTFILEKD--EIVEIVLNN 386
Query: 427 PEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDT---------ISRCTVQVYPKSW 477
+ +H+ GH F + D + ++ + R T+ V P+S
Sbjct: 387 QDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSN 446
Query: 478 TAVYVPLDNVGMW 490
+ DN G+W
Sbjct: 447 FVIRFKADNPGVW 459
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 191/494 (38%), Gaps = 69/494 (13%)
Query: 1 MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGV-KQQGILINGQFPGPSI 59
AS S+ L L + ++ T + ++ ++ P G + + G P I
Sbjct: 4 FASLKSLVVLSLTSLSLAATVA------LDLHILNANLDPDGTGARSAVTAEGTTIAPLI 57
Query: 60 EAVTNDNLIISVFNALDEPFL-----ISWNGVQQRRNSWQDG-VYGTNCPIPPGKNFTYV 113
+D I+V + L + + I W+G Q + DG + CPI P ++F Y
Sbjct: 58 TGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYD 117
Query: 114 LQVKDQIGSYFYFPSLA--FHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKN 171
V Q G+Y+Y L+ + + P + + +D I DWY
Sbjct: 118 FVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSL-YDVDDASTVITIADWYHSL 176
Query: 172 HTDLKAILDSGSDLPFPDGLVINGRGSNAN--------TFTVDQGKTYRFRISNVGISTS 223
T L + P PD +ING G N+ +V GK YRFRI + +
Sbjct: 177 STVL--FPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPN 234
Query: 224 INFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTR---- 279
F I GH+M ++EV+G T DSL I GQ YSV+V A+Q Y+I +
Sbjct: 235 YAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN 294
Query: 280 -FTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGS 338
FT + SA + Y T +L +A + + P P G+
Sbjct: 295 GFTGGINSA--IFRYQGAAVAEPTTSQNSGT-----ALNEANLIPLINPGAPGNPVPGGA 347
Query: 339 YHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD 398
+ +R+ A T + + +N FIP P+ L + S + P+
Sbjct: 348 ------DINLNLRIGRNATTAD----FTINGAPFIPPTVPVLLQ-------ILSGVTNPN 390
Query: 399 NPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLT 458
+ GGA V++ E+ P +H+ GHNF V TP S +
Sbjct: 391 DLLPGGA-----VISLPANQVIEISI--PGGGNHPFHLHGHNFDVV------RTPGSSV- 436
Query: 459 YNLRDTISRCTVQV 472
YN + + R V +
Sbjct: 437 YNYVNPVRRDVVSI 450
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 34/266 (12%)
Query: 30 NWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFL-----ISWN 84
N VT + G + +++NG PGP I D ++V N L + + W+
Sbjct: 7 NLVVTNAAVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWH 66
Query: 85 GVQQRRNSWQDG-VYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXX 143
G Q+ +W DG + CPI G +F Y Q G+++Y H
Sbjct: 67 GFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWY------HSHLSTQYCDGD 120
Query: 144 XSRPLIPVPFDPPAG-------DFTILAGDWYKKNHTDLKAILDSGSDLPF-PDGLVING 195
++ P DP A + I DWY HT + +G P D +ING
Sbjct: 121 RGPFVVYDPNDPSANLYDVDNLNTVITLTDWY---HTAAQ----NGPAKPGGADATLING 173
Query: 196 RG-------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY 248
+G ++ +V GK YRFR+ + + F I GH+M +++V+ +
Sbjct: 174 QGRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVV 233
Query: 249 DSLDIHLGQSYSVLVRADQPPQGYYI 274
+ I+ Q YS ++ A+Q Y+I
Sbjct: 234 LKIQIYAAQRYSFILNANQAVNNYWI 259
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 17/251 (6%)
Query: 38 IYPLGV-KQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQD 95
I P GV K +L+N + GP+I A DN+ ++V N L + W+G++Q N + D
Sbjct: 88 IGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFND 147
Query: 96 GVYG-TNCPIPP-GKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPF 153
G G T CPIPP G TY + Q G+ +Y + +P+
Sbjct: 148 GANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFSAQYGNGVVGTIQIDGP--ASLPY 204
Query: 154 DPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANT-------FTVD 206
D G F ++ D+Y ++ +L S P D ++ NG + T T+
Sbjct: 205 DIDLGVFPLM--DYYYRSADELVHFTQSNG-APPSDNVLFNGTARHPETGAGQWYNVTLT 261
Query: 207 QGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRAD 266
GK +R RI N + GH M ++ + T SL + +GQ Y V + A+
Sbjct: 262 PGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDAN 321
Query: 267 QPPQGYYIVIS 277
P Y+ ++
Sbjct: 322 SPVGNYWFNVT 332
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQ-DGV-YGTNCPIPPGK 108
NGQ P P I + D++ ++V N P I W+G+ Q R +WQ DGV + T I PG
Sbjct: 28 NGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQ-RGTWQSDGVPHATQHAIEPGD 86
Query: 109 NFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDP------PAGDFTI 162
FTY + + G+ +Y H PLI P +P D+ +
Sbjct: 87 TFTYKFKA-EPAGTMWYH----CHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYIL 141
Query: 163 LAGDWYKKNHTDLKAILDSGSDLPFPDGL---VINGRGSNANTF------TVDQGKTYRF 213
+ DW + S ++ P G+ V + NA +F V +G R
Sbjct: 142 MLSDW-----------VSSWANKPGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRL 190
Query: 214 RISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTY-DSLDIHLGQSYSVLVRADQP 268
R+ G GH + +G + D++ I G+ Y V++ D P
Sbjct: 191 RLIGAGDHVHA-IHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP 245
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 99/249 (39%), Gaps = 49/249 (19%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG P P IE D L I V N L E I W+GV + QDG + PI G+
Sbjct: 76 NGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPD--QDG--SPHDPILAGEER 131
Query: 111 TYVLQV-KDQIGSYFYFPSLAFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYK 169
Y ++ +D G+Y+Y P + S+ + F AG F I A K
Sbjct: 132 IYRFEIPQDSAGTYWYHPHPHY-----------TASKQV----FMGLAGAFVIKA----K 172
Query: 170 KN---HTDLKAI------LDSGSDLP-----------FPDGLVINGRGSNANTFTVDQGK 209
K+ H K + LD + +P + ++ING+ ++
Sbjct: 173 KDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNE-- 230
Query: 210 TYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP 269
R RI N + +N RIQG K +LV +G + Y ++ L + V V D P
Sbjct: 231 --RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKE-ELFLSPASRVEVLIDAPK 287
Query: 270 QGYYIVIST 278
G + + S
Sbjct: 288 DGNFKLESA 296
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 30/250 (12%)
Query: 40 PLGVK-QQGILIN--GQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDG 96
PL + Q+ L+ G FPGP++ D + +++ N L EP + W+G+
Sbjct: 27 PLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL-----PISPK 81
Query: 97 VYGTNCPIPPGKNFTYVLQV-KDQIGSYFYFPSLAFHXXXXX---XXXXXXXSRPLIPVP 152
V IPPG+++TY V K+ G+++Y P L L +P
Sbjct: 82 VDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIP 141
Query: 153 FDPPAGDFTILAGDWYKKN-----HTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQ 207
A + ++ D + HT + + DL +++NG V Q
Sbjct: 142 ELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDL-----VLVNG---ALRPTLVAQ 193
Query: 208 GKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHL--GQSYSVLVRA 265
T R R+ N + +Q H + L+ +G L+ + ++ L G+ VLVR
Sbjct: 194 KATLRLRLLNASNARYYRLALQDHPLYLIAADGGF-LEEPLEVSELLLAPGERAEVLVRL 252
Query: 266 DQPPQGYYIV 275
+ +G +++
Sbjct: 253 RK--EGRFLL 260
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 42 GVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTN 101
G+ +G NG+ PGP++ A D L I NA P I ++GV + + DG G
Sbjct: 51 GIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107
Query: 102 C-PIPPGKNFTYVLQVKDQIGSYFY 125
I PG++FTY G++ Y
Sbjct: 108 AGSIAPGQSFTYEFDAT-PFGTHLY 131
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 32 NVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRN 91
TY + G +G+L P+I + +++ N L EP ++ W+G
Sbjct: 19 EATYIEATASGYMAEGVL------NPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV--- 69
Query: 92 SWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFP 127
+W + + + I PG+++ Y V ++ G+Y Y P
Sbjct: 70 NWHNDAH-PSFAITPGESYNYSFDVVNRAGTYLYHP 104
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 159 DFTILAGDWYKKNHTDLKAILDSGSDLPF---PDGLVINGRG---SNANTFTVDQGKTYR 212
+F I+ GD+Y K + + D P+ +V NG + N G+T R
Sbjct: 166 EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVR 225
Query: 213 FRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQP 268
+ N G + +F + G V VEG + S + G S V + D P
Sbjct: 226 MYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIP 281
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 12/126 (9%)
Query: 159 DFTILAGDWYKKNHT--------DLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKT 210
++ ++ GD+Y K D+ +D +D +G V G ++ N+ T G+T
Sbjct: 156 EYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSV--GSTTDENSLTAKVGET 213
Query: 211 YRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQ 270
R I N G + +F + G V VEG + + I G + V + + P
Sbjct: 214 VRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVP-- 271
Query: 271 GYYIVI 276
G +I++
Sbjct: 272 GTFILV 277
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNF 110
NG GP+++ + + ++N L E + W+G++ DG G IPPG
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEV--DG--GPQGIIPPGGKR 97
Query: 111 TYVLQVKDQIGSYFYFP 127
+ L V + ++ P
Sbjct: 98 SVTLNVDQPAATCWFHP 114
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles
Of Various Metal Cation Binding Sites
Length = 1065
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQ 115
GP + A D + I N P+ I +GVQ + T P PG+ TYV +
Sbjct: 809 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------TVTPTLPGETLTYVWK 860
Query: 116 VKDQIGS 122
+ ++ G+
Sbjct: 861 IPERSGA 867
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 56 GPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQ 115
GP + A D + I N P+ I +GVQ + T P PG+ TYV +
Sbjct: 790 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------TVTPTLPGETLTYVWK 841
Query: 116 VKDQIGS 122
+ ++ G+
Sbjct: 842 IPERSGA 848
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 41 LGVKQQGI-LINGQ--FPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGV 97
LG Q G L G+ PGP IE D L I N +D P + +G+ +S DG
Sbjct: 23 LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISS--DGT 80
Query: 98 YGTNCPIPPGKNFTYV 113
+ + PG TY
Sbjct: 81 KQSRSDVEPGGTRTYT 96
>pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site: D116a Mutant
Length = 513
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site: D116e Mutant
Length = 513
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site: D116n Mutant
Length = 513
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site: E498d Mutant
Length = 513
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site:e498t Mutant
Length = 513
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota
Length = 513
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein
From Bacillus Subtilis
pdb|1OF0|A Chain A, Crystal Structure Of Bacillus Subtilis Cota After 1h
Soaking With Ebs
pdb|1W6L|A Chain A, 3d Structure Of Cota Incubated With Cucl2
pdb|1W6W|A Chain A, 3d Structure Of Cota Incubated With Sodium Azide
pdb|1W8E|A Chain A, 3d Structure Of Cota Incubated With Hydrogen Peroxide
pdb|2BHF|A Chain A, 3d Structure Of The Reduced Form Of Cota
pdb|2X88|A Chain A, Crystal Structure Of Holocota
pdb|3ZDW|A Chain A, Substrate And Dioxygen Binding To The Endospore Coat
Laccase Cota From Bacillus Subtilis
Length = 513
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of
Cota-Laccase: I494a Mutant
Length = 513
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|4AKO|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase
Trinuclear Site: E498l Mutant
Length = 507
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 51 NGQFPGPSIEAVTNDNLIISVFNAL 75
NG FPGP+IE N+N+ + N L
Sbjct: 52 NGLFPGPTIEVKRNENVYVKWMNNL 76
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 37 DIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDG 96
++Y G+ G + PGP +E D L I + N D + +GV NS DG
Sbjct: 42 ELYGYGLAPGGATV----PGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVNS--DG 95
Query: 97 VYGTNCPIPPGKNFTY 112
+ PG+ Y
Sbjct: 96 TLMNGSAVMPGQTRRY 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,001,903
Number of Sequences: 62578
Number of extensions: 745095
Number of successful extensions: 1754
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1625
Number of HSP's gapped (non-prelim): 68
length of query: 538
length of database: 14,973,337
effective HSP length: 103
effective length of query: 435
effective length of database: 8,527,803
effective search space: 3709594305
effective search space used: 3709594305
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)